RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNH7 (Homo sapiens)

Ensembl gene IDs: ENSG00000184611

Ensembl transcript IDs: ENST00000328032.8, ENST00000332142.10, ENST00000477019.1, ENST00000618399.4, ENST00000621889.1

Found 339 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCTATAATGGTACCTTGTaGGCCCCTGAGTCAAGTAGA +
Preference number: 2 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFYNGTL*APESSR
Trigger: TCTACTTGACTCAGGGGCTCACAAGGTACCATTATA...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
3UTR-3UTR TCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTTATAATGGTACCTTGTaGGCCCCTGAGTCAAGTAGA +
Preference number: 2 (lower is better)
Translates to: LICVEGIFITKYWFSKSSYNGTL*APESSR
Trigger: TCTACTTGACTCAGGGGCTCACAAGGTACCATTATA...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
3UTR-3UTR TCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTAAAAAATAAGGTGCCGTaGGATGCTGGCAGTTTTAAC +
Preference number: 2 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVKNKVP*DAGSFN
Trigger: GTTAAAACTGCCAGCATCTCACGGCACCTTATTTTT...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
3UTR-3UTR CCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGCCATGCAAGAGAAATTaGAGTTTCCTAACATGCATG +
Preference number: 2 (lower is better)
Translates to: NSFIPWFLICVEGIFITKPCKRN*SFLTCM
Trigger: CATGCATGTTAGGAAACTCCAATTTCTCTTGCATGG...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
3UTR-3UTR CCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAACCATGCAAGAGAAATTaGAGTTTCCTAACATGCATG +
Preference number: 2 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKPCKRN*SFLTCM
Trigger: CATGCATGTTAGGAAACTCCAATTTCTCTTGCATGG...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
3UTR GCA 72 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTaGGTGGAAGGCATTTTCATAACGAAGTACTGGTTT +
Preference number: 3 (lower is better)
Translates to: ASMNSFIPWFLI*VEGIFITKYWF
Trigger: AAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
3UTR-3UTR CAA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTCCATGCAAGAGAAATaGGAGTTTCCTAACATGCAT +
Preference number: 3 (lower is better)
Translates to: NSFIPWFLICVEGIFITKSMQEK*EFPNMH
Trigger: ATGCATGTTAGGAAACTCCAATTTCTCTTGCATGGA...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGGTGCCACATGCCCCCTaGGCACAGGCATGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERVPHAP*AQACWP
Trigger: GGGCCAACATGCCTGTGCGCAGGGGGCATGTGGCAC...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR TCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCCCCCAGGCAGCTCGCTaGAGTGCAGATGGACTGGAG +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFPQAAR*SADGLE
Trigger: CTCCAGTCCATCTGCACTTCAGCGAGCTGCCTGGGG...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCAGGACATCCCCACAGTaGACGAGGGTGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFRTSPQ*TRVSPG
Trigger: TCCAGGAGACACCCTCGTTCACTGTGGGGATGTCCT...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATCCCCAGGCAGCTCGCTaGAGTGCAGATGGACTGGAG +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHPQAAR*SADGLE
Trigger: CTCCAGTCCATCTGCACTTCAGCGAGCTGCCTGGGG...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCTTTTGTGGTGCCACATaGCCCCTGCGCACAGGCATG +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFFCGAT*PLRTGM
Trigger: CATGCCTGTGCGCAGGGGGCATGTGGCACCACAAAA...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR GCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGCAGGTGCATGGCTTTTaGATGACATCTGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERQVHGF*MTSGLE
Trigger: CTCCAGGCCAGATGTCATGCAAAAGCCATGCACCTG...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR CCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGGCTCCCCCGGAGCTCTaGAGTTCTCCCGGGATCTCT +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKAPPEL*SSPGIS
Trigger: AGAGATCCCGGGAGAACTCCAGAGCTCCGGGGGAGC...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR CCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATTGCGCACAGGCATGTTaGCCCCGGTCTTCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHCAQAC*PRSSEE
Trigger: CTCCTCGGAAGACCGGGGCCAACATGCCTGTGCGCA...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR CCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGCTGGAATGGGACAGCTaGGAACTTGACTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERLEWDS*ELDCSM
Trigger: CATGCTGCAGTCAAGTTCCCAGCTGTCCCATTCCAG...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGTTACCCTCTCTGGGGTaGCAGCGTTTTCATTATCCG +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERLPSLG*QRFHYP
Trigger: CGGATAATGAAAACGCTGCCACCCCAGAGAGGGTAA...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGAGCTTTCCCTTGATCTaGAATGGGACAGCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERSFPLI*NGTAGN
Trigger: GTTCCCAGCTGTCCCATTCCAGATCAAGGGAAAGCT...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGGTTGCCTCAGAGGGTTaGGGATTTGGTGAAAGCGAA +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERVASEG*GFGESE
Trigger: TTCGCTTTCACCAAATCCCCAACCCTCTGAGGCAAC...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGGTGCATGGGTGGTTTTaGACTTCATTGCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERVHGWF*TSLPKL
Trigger: GAGCTTTGGCAATGAAGTTCAAAACCACCCATGCAC...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGAACTTCGGTCAGTTTTaGTGGATGCTTCCGGTTGAC +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERNFGQF*WMLPVD
Trigger: GTCAACCGGAAGCATCCATCAAAACTGACCGAAGTT...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCTTGGTCTCGGGTCCATaGAGAAAGTCGCAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFLVSGP*RKSQVH
Trigger: ATGCACCTGCGACTTTCTCCATGGACCCGAGACCAA...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR CCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCAACGAGGGTGTCTCCTaGAGGTGCATGGGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFNEGVS*RCMGGF
Trigger: AAAACCACCCATGCACCTCCAGGAGACACCCTCGTT...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCTACCATACTGTAGGCTaGGGGGACCACAGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFYHTVG*GDHSGL
Trigger: CAAACCACTGTGGTCCCCCCAGCCTACAGTATGGTA...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTGGACAGCTGGGAACTTaGCTGCAGCATGTCAGGGTA +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSGQLGT*LQHVRV
Trigger: TACCCTGACATGCTGCAGTCAAGTTCCCAGCTGTCC...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGGGACAGCTGGGAACTTaGCTGCAGCATGTCAGGGTA +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKGQLGT*LQHVRV
Trigger: TACCCTGACATGCTGCAGTCAAGTTCCCAGCTGTCC...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAAGGACATCCCCACAGTaGACGAGGGTGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKRTSPQ*TRVSPG
Trigger: TCCAGGAGACACCCTCGTTCACTGTGGGGATGTCCT...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGAGAAATAAAGTGCAGTaGGGACATCCCCACAGTGAA +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERRNKVQ*GHPHSE
Trigger: TTCACTGTGGGGATGTCCTCACTGCACTTTATTTCT...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGAGCTTCGCATGTCAGTaGTATCTTTGCAAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERSFACQ*YLCKSD
Trigger: GTCACTCTTGCAAAGATATCACTGACATGCGAAGCT...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAACCACTTCCCCGTAGGTaGGGTCGCTTTCGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKPLPRR*GRFRFQ
Trigger: CTGAAACCGAAAGCGACCTCACCTACGGGGAAGTGG...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGTCAGAAACATGCCTATaGAGACCCACGATTCCTACA +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERSETCL*RPTIPT
Trigger: TGTAGGAATCGTGGGTCTTCATAGGCATGTTTCTGA...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCTTCAGGCTGGGGATGTaGATTTTCTCGTTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFFRLGM*IFSFPA
Trigger: AGCTGGGAACGAGAAAATGCACATCCCCAGCCTGAA...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGGGCAGCTCGCTGAAGTaGAGATGGACTGGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKGSSLK*RWTGVF
Trigger: GAAGACTCCAGTCCATCTGCACTTCAGCGAGCTGCC...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGAATGCCTGGGCAATTTaGGCAATATCATGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERNAWAI*AISCLL
Trigger: CAAGAGGCATGATATTGCCCAAATTGCCCAGGCATT...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR CCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCAGCTTTCCCTTGATCTaGAATGGGACAGCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFSFPLI*NGTAGN
Trigger: GTTCCCAGCTGTCCCATTCCAGATCAAGGGAAAGCT...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCTCTGCATGTGGTACCTaGCAGTTCCCGAGTATAGTC +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFSACGT*QFPSIV
Trigger: GACTATACTCGGGAACTGCCAGGTACCACATGCAGA...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGTGTCTCATCAGAACCTaGTCCAAAAATCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERCLIRT*SKNQQV
Trigger: GACTTGCTGATTTTTGGATCAGGTTCTGATGAGACA...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCGGATGGTCCAGAACTTaGGTCACTGTCATTGTAACG +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFGWSRT*VTVIVT
Trigger: CGTTACAATGACAGTGACTCAAGTTCTGGACCATCC...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGAAAAATAAGGTGCCGTaGGATGCTGGCAGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERKNKVP*DAGSFN
Trigger: GTTAAAACTGCCAGCATCTCACGGCACCTTATTTTT...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGGAGGGCTCTTACATCTaGATTAGACTTTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVEREGSYI*IRLSRF
Trigger: AAACCTGGAAAGTCTAATGCAGATGTAAGAGCCCTC...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGTCAAGCCTGTTAAGTTaGTCCTGGAGCAGATCTAAT +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERSSLLS*SWSRSN
Trigger: ATTAGATCTGCTCCAGGAGCAACTTAACAGGCTTGA...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGAATGGGACAGCTaGGAACTTGACTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVLEWDS*ELDCSM
Trigger: CATGCTGCAGTCAAGTTCCCAGCTGTCCCATTCCAG...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCGGTTTGAATCTGATGTaGATCCCAGGAGGCTTGACT +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFGLNLM*IPGGLT
Trigger: AGTCAAGCCTCCTGGGATCCACATCAGATTCAAACC...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAATCGATCCAGTTTCCTaGCCACGCGCACAAGACGGA +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKIDPVS*PRAQDG
Trigger: TCCGTCTTGTGCGCGTGGCCAGGAAACTGGATCGAT...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAATCGATCCAGTTTCCTaGCCACGCGCACAAGACGGA +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKIDPVS*PRAQDG
Trigger: TCCGTCTTGTGCGCGTGGCCAGGAAACTGGATCGAT...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAACGAGGGTGTCTCCTaGAGGTGCATGGGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSNEGVS*RCMGGF
Trigger: AAAACCACCCATGCACCTCCAGGAGACACCCTCGTT...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGGAAGTGCAGATGGACTaGAGTCTTCAGGCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKEVQMD*SLQAGD
Trigger: ATCCCCAGCCTGAAGACTCCAGTCCATCTGCACTTC...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTATCGCTGAAGTGCAGATaGACTGGAGTCTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVSLKCR*TGVFRL
Trigger: CAGCCTGAAGACTCCAGTCCATCTGCACTTCAGCGA...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATTACCATACTGTAGGCTaGGGGGACCACAGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHYHTVG*GDHSGL
Trigger: CAAACCACTGTGGTCCCCCCAGCCTACAGTATGGTA...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCCAGAGCATCCTCTTTTaGAACCAGAATTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFQSILF*NQNSLP
Trigger: GGGAAGAGAATTCTGGTTTCAAAAGAGGATGCTCTG...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR TCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCGGATCCCAGGAGGCTTaGCTTGATATGATTAAAAGG +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFGSQEA*LDMIKR
Trigger: CCTTTTAATCATATCAAGTCAAGCCTCCTGGGATCC...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATGTTCTTCTCTGTCATTaGGGAGGAAGGCTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHVLLCH*GGRLQS
Trigger: ACTCTGCAGCCTTCCTCCTCAATGACAGAGAAGAAC...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCAGCTTCGCATGTCAGTaGTATCTTTGCAAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFSFACQ*YLCKSD
Trigger: GTCACTCTTGCAAAGATATCACTGACATGCGAAGCT...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCTCAGAAACATGCCTATaGAGACCCACGATTCCTACA +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFSETCL*RPTIPT
Trigger: TGTAGGAATCGTGGGTCTTCATAGGCATGTTTCTGA...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAAATGTATTTTGTGGTaGCACATGCCCCCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHKCILW*HMPPAH
Trigger: GTGCGCAGGGGGCATGTGGCACCACAAAATACATTT...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR GCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCTTGATGCGTGGTGTCTaGAGTTTGTATTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFLMRGV*SLYSGR
Trigger: CCTACCTGAATACAAACTGCAGACACCACGCATCAA...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTAAAGGCAACCTTTACTTaGCCCCCGAAAGGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVKATFT*PPKGFA
Trigger: TGCAAAGCCTTTCGGGGGGCAAGTAAAGGTTGCCTT...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGGGTGTCTCCTGGAGGTaGATGGGTGGTTTTGAACTT +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKGVSWR*MGGFEL
Trigger: AAGTTCAAAACCACCCATGCACCTCCAGGAGACACC...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATGGTGTCTCCTGGAGGTaGATGGGTGGTTTTGAACTT +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHGVSWR*MGGFEL
Trigger: AAGTTCAAAACCACCCATGCACCTCCAGGAGACACC...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCAAAATCGAGCCCAGATaGTTTCCCTATTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFKIEPR*FPYSWR
Trigger: TCTCCAGGAATAGGGAAAGCATCTGGGCTCGATTTT...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATTTCAGGCTGGGGATGTaGATTTTCTCGTTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHFRLGM*IFSFPA
Trigger: AGCTGGGAACGAGAAAATGCACATCCCCAGCCTGAA...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATGACCCCAGCAATGCCTaGGCAATTTGGGCAATATCA +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHDPSNA*AIWAIS
Trigger: TGATATTGCCCAAATTGCCCAGGCATTGCTGGGGTC...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR CCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTTACCCTCTCTGGGGTaGCAGCGTTTTCATTATCCG +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKLPSLG*QRFHYP
Trigger: CGGATAATGAAAACGCTGCCACCCCAGAGAGGGTAA...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTTGGGTTTACCCTCTCTaGGGTGGCAGCGTTTTCATT +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSWVYPL*GGSVFI
Trigger: AATGAAAACGCTGCCACCCCAGAGAGGGTAAACCCA...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATTCCCTTGATCTGGAATaGGACAGCTGGGAACTTGAC +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHSLDLE*DSWELD
Trigger: GTCAAGTTCCCAGCTGTCCCATTCCAGATCAAGGGA...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTATCTGCATGTGGTACCTaGCAGTTCCCGAGTATAGTC +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVSACGT*QFPSIV
Trigger: GACTATACTCGGGAACTGCCAGGTACCACATGCAGA...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGGTTGCCTCAGAGGGTTaGGGATTTGGTGAAAGCGAA +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKVASEG*GFGESE
Trigger: TTCGCTTTCACCAAATCCCCAACCCTCTGAGGCAAC...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTCTGGAGTCTTCAGGCTaGGGATGTGCATTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSLESSG*GCAFSR
Trigger: ACGAGAAAATGCACATCCCCAGCCTGAAGACTCCAG...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAGAAGTGCAGATGGACTaGAGTCTTCAGGCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKEVQMD*SLQAGD
Trigger: ATCCCCAGCCTGAAGACTCCAGTCCATCTGCACTTC...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATCACTGTGTTTAGATaGATCGATGACCACCACATC +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFITVFR*IDDHHI
Trigger: GATGTGGTGGTCATCGATTCATCTAAACACAGTGAT...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAGTTCTTCTCTGTCATTaGGGAGGAAGGCTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKVLLCH*GGRLQS
Trigger: ACTCTGCAGCCTTCCTCCTCAATGACAGAGAAGAAC...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCTGTCTCATCAGAACCTaGTCCAAAAATCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFCLIRT*SKNQQV
Trigger: GACTTGCTGATTTTTGGATCAGGTTCTGATGAGACA...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCTTTGGTGAAAGCGAATaGACTCTTTTACTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFFGESE*TLLLAA
Trigger: TGCTGCGAGTAAAAGAGTTCATTCGCTTTCACCAAA...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTGCAAGTCACAGTATGTaGGGGCTCTTACATCTGCAT +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSASHSM*GLLHLH
Trigger: ATGCAGATGTAAGAGCCCTCACATACTGTGACTTGC...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCAACAAGTCTTCTCGCTaGATCTTATGCAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFNKSSR*ILCKSQ
Trigger: CTGTGACTTGCATAAGATTCAGCGAGAAGACTTGTT...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCTCTCATGCCTTAGGTTaGAAGTCAACTCTAGGTTTG +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFSHALG*KSTLGL
Trigger: CAAACCTAGAGTTGACTTTCAACCTAAGGCATGAGA...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCCATCAATGGAGGAGATaGAAGATGAGGATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFHQWRR*KMRICF
Trigger: AAAGCAGATCCTCATCTTTCATCTCCTCCATTGATG...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAACTTCGGTCAGTTTTaGTGGATGCTTCCGGTTGAC +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSNFGQF*WMLPVD
Trigger: GTCAACCGGAAGCATCCATCAAAACTGACCGAAGTT...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTAATTTGGGCAATATCATaGCTCTTGGTCTCGGGTCCA +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVIWAIS*LLVSGP
Trigger: TGGACCCGAGACCAAGAGGCATGATATTGCCCAAAT...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR GCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGGTAGGAGACTTAAAATaGTTCATGGCTACTGAATCA +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERVGDLK*FMATES
Trigger: TGATTCAGTAGCCATGAAGCATTTTAAGTCTCCTAC...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTCAATCGCATACCAAATaGAAGCCAGCCAGTGAGCAA +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSQSHTK*KPASEQ
Trigger: TTGCTCACTGGCTGGCTTGCATTTGGTATGCGATTG...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTTTACTCGCAGCATCTaGATGTGGTACCTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKFTRSI*MWYLAV
Trigger: AACTGCCAGGTACCACATGCAGATGCTGCGAGTAAA...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAAAGGCAACCTTTACTTaGCCCCCGAAAGGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKKATFT*PPKGFA
Trigger: TGCAAAGCCTTTCGGGGGGCAAGTAAAGGTTGCCTT...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCGAGGGCTCTTACATCTaGATTAGACTTTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFEGSYI*IRLSRF
Trigger: AAACCTGGAAAGTCTAATGCAGATGTAAGAGCCCTC...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATGAAGCTGTGTTCAGATaGACCCCACTTGAAAGGGAT +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHEAVFR*TPLERD
Trigger: ATCCCTTTCAAGTGGGGTGCATCTGAACACAGCTTC...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTGAAGCTGTGTTCAGATaGACCCCACTTGAAAGGGAT +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSEAVFR*TPLERD
Trigger: ATCCCTTTCAAGTGGGGTGCATCTGAACACAGCTTC...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATCCACGATTCCTACAGTaGTTAGGGATGAATCTGGCA +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHPRFLQ*LGMNLA
Trigger: TGCCAGATTCATCCCTAAGCACTGTAGGAATCGTGG...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAACAGAAATGTATTTTGTaGTGCCACATGCCCCCTGCG +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKQKCIL*CHMPPA
Trigger: CGCAGGGGGCATGTGGCACCACAAAATACATTTCTG...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR CCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTAAAAGTCGCAGGTGCATaGCTTTTGCATGACATCTGG +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVKVAGA*LLHDIW
Trigger: CCAGATGTCATGCAAAAGCCATGCACCTGCGACTTT...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR CCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGCAATATCATGCCTCTTaGTCTCGGGTCCATGGAGAA +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKQYHAS*SRVHGE
Trigger: TTCTCCATGGACCCGAGACCAAGAGGCATGATATTG...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR CCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAATGGGTTTACCCTCTCTaGGGTGGCAGCGTTTTCATT +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKWVYPL*GGSVFI
Trigger: AATGAAAACGCTGCCACCCCAGAGAGGGTAAACCCA...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAATCCCTTGATCTGGAATaGGACAGCTGGGAACTTGAC +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKSLDLE*DSWELD
Trigger: GTCAAGTTCCCAGCTGTCCCATTCCAGATCAAGGGA...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCAATCCTTCTATATCATaGACCGAAGATGCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFNPSIS*TEDALR
Trigger: ACGGAGAGCATCTTCGGTCCATGATATAGAAGGATT...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTAGGTTTGAATCTGATGTaGATCCCAGGAGGCTTGACT +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVGLNLM*IPGGLT
Trigger: AGTCAAGCCTCCTGGGATCCACATCAGATTCAAACC...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGCCCGAGTATAGTCTTTaGATAATTGCAGATACATTC +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERPEYSL*IIADTF
Trigger: GAATGTATCTGCAATTATCCAAAGACTATACTCGGG...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGCTTCTGAATCATTCATaGATTGTGATCGTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERLLNHS*IVIVGD
Trigger: ATCTCCTACGATCACAATCCATGAATGATTCAGAAG...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCTGCTTTCCCTATTCCTaGAGAAGAGTCTACTATTCC +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFCFPYS*RRVYYS
Trigger: GGAATAGTAGACTCTTCTCCAGGAATAGGGAAAGCA...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATTGGTCTGGATGTCAGTaGTCATTTGGGATTCAAGCC +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHWSGCQ*SFGIQA
Trigger: GGCTTGAATCCCAAATGACCACTGACATCCAGACCA...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCCTTCAAATTTCCGAATaGTGGTCCCCAGAAATGTAT +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFLQISE*WSPEMY
Trigger: ATACATTTCTGGGGACCATCATTCGGAAATTTGAAG...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR TCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATCATCGTTGCAATAAATaGTGGCACAGTTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHHRCNK*WHSSAL
Trigger: GAGTGCAGAACTGTGCCATCATTTATTGCAACGATG...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR TCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCTCAGGAACCAGCCTTTaGAGTAGTGTATTGCTATTT +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFSGTSL*SSVLLF
Trigger: AAATAGCAATACACTACTTCAAAGGCTGGTTCCTGA...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAGGATGGTCCAGAACTTaGGTCACTGTCATTGTAACG +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKGWSRT*VTVIVT
Trigger: CGTTACAATGACAGTGACTCAAGTTCTGGACCATCC...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCAGGCTTGACTTGATATaGTTAAAAGGCCCTTTGACA +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFRLDLI*LKGPLT
Trigger: TGTCAAAGGGCCTTTTAATCATATCAAGTCAAGCCT...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTAGCAGCAATGTCTGGTTaGGATGTAGACAAATGTCTG +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVAAMSG*DVDKCL
Trigger: CAGACATTTGTCTACATCTCAACCAGACATTGCTGC...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAGTGCATGGGTGGTTTTaGACTTCATTGCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKVHGWF*TSLPKL
Trigger: GAGCTTTGGCAATGAAGTTCAAAACCACCCATGCAC...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTAAGAAATAAAGTGCAGTaGGGACATCCCCACAGTGAA +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVRNKVQ*GHPHSE
Trigger: TTCACTGTGGGGATGTCCTCACTGCACTTTATTTCT...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAGCAAGTCACAGTATGTaGGGGCTCTTACATCTGCAT +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKASHSM*GLLHLH
Trigger: ATGCAGATGTAAGAGCCCTCACATACTGTGACTTGC...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAGAGTCTACTATTCCTaGGAAGAGCGGCTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSRVYYS*EERLLF
Trigger: GAACAAAAGCCGCTCTTCTCAGGAATAGTAGACTCT...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATGGGTCTCTGATATTCTaGTCCTGCTGTTACCATACT +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHGSLIF*SCCYHT
Trigger: AGTATGGTAACAGCAGGATCAGAATATCAGAGACCC...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTAGGGTCTCTGATATTCTaGTCCTGCTGTTACCATACT +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVGSLIF*SCCYHT
Trigger: AGTATGGTAACAGCAGGATCAGAATATCAGAGACCC...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTATGGATGATGGGTCTCTaGTATTCTGATCCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVWMMGL*YSDPAV
Trigger: AACAGCAGGATCAGAATATCAGAGACCCATCATCCA...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTGGATGATGGGTCTCTaGTATTCTGATCCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKWMMGL*YSDPAV
Trigger: AACAGCAGGATCAGAATATCAGAGACCCATCATCCA...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTATTCTCATCAGCTGGATaGTGGGTCTCTGATATTCTG +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVFSSAG*WVSDIL
Trigger: CAGAATATCAGAGACCCATCATCCAGCTGATGAGAA...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGAAATTCAGGACATTGTaGGGAAGGGCTGAAACTTCG +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKKFRTL*GRAETS
Trigger: CGAAGTTTCAGCCCTTCCTCACAATGTCCTGAATTT...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTAAAATTCAGGACATTGTaGGGAAGGGCTGAAACTTCG +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVKFRTL*GRAETS
Trigger: CGAAGTTTCAGCCCTTCCTCACAATGTCCTGAATTT...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTCAGATGCACCCCACTTaGAAGGGATTCTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSQMHPT*KGFFGF
Trigger: AAATCCAAAGAATCCCTTTCAAGTGGGGTGCATCTG...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATCAGATGCACCCCACTTaGAAGGGATTCTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHQMHPT*KGFFGF
Trigger: AAATCCAAAGAATCCCTTTCAAGTGGGGTGCATCTG...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTATAATGGTACCTTGTaGGCCCCTGAGTCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKYNGTL*APESSR
Trigger: TCTACTTGACTCAGGGGCTCACAAGGTACCATTATA...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAACAATCGCATACCAAATaGAAGCCAGCCAGTGAGCAA +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKQSHTK*KPASEQ
Trigger: TTGCTCACTGGCTGGCTTGCATTTGGTATGCGATTG...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAATTTACTCGCAGCATCTaGATGTGGTACCTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKFTRSI*MWYLAV
Trigger: AACTGCCAGGTACCACATGCAGATGCTGCGAGTAAA...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTATATTCTTCAAGACGTTaGCTCAGAGGGTTGGGGATT +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVYSSRR*LRGLGI
Trigger: AATCCCCAACCCTCTGAGGCAACGTCTTGAAGAATA...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAATCGAGCCCAGATaGTTTCCCTATTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSKIEPR*FPYSWR
Trigger: TCTCCAGGAATAGGGAAAGCATCTGGGCTCGATTTT...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATGTCAGTTTTGATGGATaGTTCCGGTTGACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHVSFDG*FRLTGS
Trigger: AGAACCAGTCAACCGGAAGCATCCATCAAAACTGAC...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGGTCAGTTTTGATGGATaGTTCCGGTTGACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKVSFDG*FRLTGS
Trigger: AGAACCAGTCAACCGGAAGCATCCATCAAAACTGAC...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAACCACGATTCCTACAGTaGTTAGGGATGAATCTGGCA +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKPRFLQ*LGMNLA
Trigger: TGCCAGATTCATCCCTAAGCACTGTAGGAATCGTGG...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGCTTTTGCATGACATCTaGCCTGGAGAAACCAGTCAT +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKLLHDI*PGETSH
Trigger: ATGACTGGTTTCTCCAGGCCAGATGTCATGCAAAAG...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR CCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGCTTTTGGGAGAGGAATaGTCAAGAGGTCCGGATATA +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKLLGEE*SRGPDI
Trigger: TATATCCGGACCTCTTGACCATTCCTCTCCCAAAAG...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTCCTAAAGAGAGAACCTaGGTCACTTTCTCAGTCACA +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSPKERT*VTFSVT
Trigger: TGTGACTGAGAAAGTGACCCAGGTTCTCTCTTTAGG...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCAAACTTGTTGATGCGTaGTGTCTGCAGTTTGTATTC +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFKLVDA*CLQFVF
Trigger: GAATACAAACTGCAGACACCACGCATCAACAAGTTT...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCCTGTTAAGTTGCTCCTaGAGCAGATCTAATCTTTGT +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFLLSCS*SRSNLC
Trigger: ACAAAGATTAGATCTGCTCCAGGAGCAACTTAACAG...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAATGGTCTGGATGTCAGTaGTCATTTGGGATTCAAGCC +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKWSGCQ*SFGIQA
Trigger: GGCTTGAATCCCAAATGACCACTGACATCCAGACCA...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCCCATGCAAGAGAAATTaGAGTTTCCTAACATGCATG +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFPCKRN*SFLTCM
Trigger: CATGCATGTTAGGAAACTCCAATTTCTCTTGCATGG...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGAACAGTTTTATCCCTTaGTTTCTTATTTGCGTGGAA +
Preference number: 4 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERNSFIP*FLICVE
Trigger: TTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAGGATCCCAGGAGGCTTaGCTTGATATGATTAAAAGG +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKGSQEA*LDMIKR
Trigger: CCTTTTAATCATATCAAGTCAAGCCTCCTGGGATCC...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTATGGTGCTGTATTTGTTaGGGTTTGAATCTGATGTGG +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVWCCIC*GLNLMW
Trigger: CCACATCAGATTCAAACCTCAACAAATACAGCACCA...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATCTCAGTTTTGACCTCTaGAAAATTCAGAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHLSFDL*KIQSEL
Trigger: CAGCTCACTCTGAATTTTTCAGAGGTCAAAACTGAG...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAGCAGCAATGTCTGGTTaGGATGTAGACAAATGTCTG +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKAAMSG*DVDKCL
Trigger: CAGACATTTGTCTACATCTCAACCAGACATTGCTGC...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACAAGTCTTCTCGCTaGATCTTATGCAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHNKSSR*ILCKSQ
Trigger: CTGTGACTTGCATAAGATTCAGCGAGAAGACTTGTT...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCAGGTTTGTTAGAAAGTaGTCAGAAAACTCAGGATAC +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFRFVRK*SENSGY
Trigger: GTATCCTGAGTTTTCTGATCACTTTCTAACAAACCT...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATTCTCATGCCTTAGGTTaGAAGTCAACTCTAGGTTTG +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHSHALG*KSTLGL
Trigger: CAAACCTAGAGTTGACTTTCAACCTAAGGCATGAGA...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATCATCAATGGAGGAGATaGAAGATGAGGATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHHQWRR*KMRICF
Trigger: AAAGCAGATCCTCATCTTTCATCTCCTCCATTGATG...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGAGTCTACTATTCCTaGGAAGAGCGGCTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKRVYYS*EERLLF
Trigger: GAACAAAAGCCGCTCTTCTCAGGAATAGTAGACTCT...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAATTCTCATCAGCTGGATaGTGGGTCTCTGATATTCTG +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKFSSAG*WVSDIL
Trigger: CAGAATATCAGAGACCCATCATCCAGCTGATGAGAA...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAATATAATGGTACCTTGTaGGCCCCTGAGTCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKYNGTL*APESSR
Trigger: TCTACTTGACTCAGGGGCTCACAAGGTACCATTATA...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAAATAAGGTGCCGTaGGATGCTGGCAGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSKNKVP*DAGSFN
Trigger: GTTAAAACTGCCAGCATCTCACGGCACCTTATTTTT...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAATGATGGCACAGTTCTaGACTCTGGCATTTGCAATG +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKMMAQF*TLAFAM
Trigger: CATTGCAAATGCCAGAGTGCAGAACTGTGCCATCAT...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR GCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAATTGATGCGTGGTGTCTaGAGTTTGTATTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKLMRGV*SLYSGR
Trigger: CCTACCTGAATACAAACTGCAGACACCACGCATCAA...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAATATTCTTCAAGACGTTaGCTCAGAGGGTTGGGGATT +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKYSSRR*LRGLGI
Trigger: AATCCCCAACCCTCTGAGGCAACGTCTTGAAGAATA...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTATCAAGCCTGTTAAGTTaGTCCTGGAGCAGATCTAAT +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVSSLLS*SWSRSN
Trigger: ATTAGATCTGCTCCAGGAGCAACTTAACAGGCTTGA...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATACAGTGGTTTGTTTCTaGAGCAACTGTAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHTVVCF*SNCKMV
Trigger: GACCATCTTACAGTTGCTGCAGAAACAAACCACTGT...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGAGGGAGAACATTTGCTaGGCTGTATCAAAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKRENIC*AVSKLL
Trigger: CAAAAGCTTTGATACAGCCCAGCAAATGTTCTCCCT...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAACTTTTGGGAGAGGAATaGTCAAGAGGTCCGGATATA +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKLLGEE*SRGPDI
Trigger: TATATCCGGACCTCTTGACCATTCCTCTCCCAAAAG...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGAATCCTTCTATATCATaGACCGAAGATGCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKNPSIS*TEDALR
Trigger: ACGGAGAGCATCTTCGGTCCATGATATAGAAGGATT...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGAATATGTTCTTGGGGTaGACGCCGAATCCTTCTATA +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKNMFLG*TPNPSI
Trigger: TATAGAAGGATTCGGCGTCCACCCCAAGAACATATT...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTAAATATGTTCTTGGGGTaGACGCCGAATCCTTCTATA +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVNMFLG*TPNPSI
Trigger: TATAGAAGGATTCGGCGTCCACCCCAAGAACATATT...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAACCTAAAGAGAGAACCTaGGTCACTTTCTCAGTCACA +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKPKERT*VTFSVT
Trigger: TGTGACTGAGAAAGTGACCCAGGTTCTCTCTTTAGG...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTGCTTTCCCTATTCCTaGAGAAGAGTCTACTATTCC +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKCFPYS*RRVYYS
Trigger: GGAATAGTAGACTCTTCTCCAGGAATAGGGAAAGCA...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGGCATTCTTCCTGAGGTaGGCACTGTTTCTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKAFFLR*ALFLQN
Trigger: ATTTTGAAGAAACAGTGCCCACCTCAGGAAGAATGC...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTGCATTCTTCCTGAGGTaGGCACTGTTTCTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSAFFLR*ALFLQN
Trigger: ATTTTGAAGAAACAGTGCCCACCTCAGGAAGAATGC...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACTGTAAGATGGTCTaGATGTCAGTGGTCATTTGG +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHNCKMV*MSVVIW
Trigger: CCAAATGACCACTGACATCCAGACCATCTTACAGTT...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAACTGTAAGATGGTCTaGATGTCAGTGGTCATTTGG +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSNCKMV*MSVVIW
Trigger: CCAAATGACCACTGACATCCAGACCATCTTACAGTT...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
3UTR CAA 72 bp TGCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTaGCGTGGAAGGCATTTTCATAACGAAGTACTGGTT +
Preference number: 4 (lower is better)
Translates to: CIHEQFYPLVSY*RGRHFHNEVLV
Trigger: AACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAATTTTGTGATAGTAGGTaGCCTCCACTTTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKFCDSR*PPLSSL
Trigger: AAGAGAGGAAAGTGGAGGTCACCTACTATCACAAAA...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR TCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTATGCTTCATGGCTACTaGATCATCACTGTGTTTAGA +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSMLHGY*IITVFR
Trigger: TCTAAACACAGTGATGATTCAGTAGCCATGAAGCAT...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAATGGTGCTGTATTTGTTaGGGTTTGAATCTGATGTGG +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKWCCIC*GLNLMW
Trigger: CCACATCAGATTCAAACCTCAACAAATACAGCACCA...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAACTCAGTTTTGACCTCTaGAAAATTCAGAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKLSFDL*KIQSEL
Trigger: CAGCTCACTCTGAATTTTTCAGAGGTCAAAACTGAG...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTCAGGAACCAGCCTTTaGAGTAGTGTATTGCTATTT +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKSGTSL*SSVLLF
Trigger: AAATAGCAATACACTACTTCAAAGGCTGGTTCCTGA...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAATTTGGTGAAAGCGAATaGACTCTTTTACTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKFGESE*TLLLAA
Trigger: TGCTGCGAGTAAAAGAGTTCATTCGCTTTCACCAAA...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAGGCTTGACTTGATATaGTTAAAAGGCCCTTTGACA +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSRLDLI*LKGPLT
Trigger: TGTCAAAGGGCCTTTTAATCATATCAAGTCAAGCCT...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTTTGAGTTGCATCCATaGACAGTTTTATCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKFELHP*TVLSLG
Trigger: ACCAAGGGATAAAACTGTTCATGGATGCAACTCAAA...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACAAGTCAAAAGGAATTaGTGCAACCATGTCAATCAG +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVQVKRN*CNHVNQ
Trigger: CTGATTGACATGGTTGCAGCAATTCCTTTTGACTTG...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTCAAGTCAAAAGGAATTaGTGCAACCATGTCAATCAG +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSQVKRN*CNHVNQ
Trigger: CTGATTGACATGGTTGCAGCAATTCCTTTTGACTTG...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATATTGGTGTAAGTCCATaGGTGCTGGAAATATTCTTC +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHIGVSP*VLEIFF
Trigger: GAAGAATATTTCCAGCACGCATGGACTTACACCAAT...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAACAGTGGTTTGTTTCTaGAGCAACTGTAAGATGGTC +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKTVVCF*SNCKMV
Trigger: GACCATCTTACAGTTGCTGCAGAAACAAACCACTGT...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAATAGCCACGCCCTCTTaGTTTTTCACTGGAATTATG +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKIATPS*FFTGIM
Trigger: CATAATTCCAGTGAAAAACCAAGAGGGCGTGGCTAT...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGGGAGAACATTTGCTaGGCTGTATCAAAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKRENIC*AVSKLL
Trigger: CAAAAGCTTTGATACAGCCCAGCAAATGTTCTCCCT...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATATTCAGAGTGAGCTGTaGAATCTTGTTAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHIQSEL*NLVNGA
Trigger: AGCACCATTAACAAGATTCCACAGCTCACTCTGAAT...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGAAACTTGTTGATGCGTaGTGTCTGCAGTTTGTATTC +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKKLVDA*CLQFVF
Trigger: GAATACAAACTGCAGACACCACGCATCAACAAGTTT...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAGTGTATTGCTATTTTaGCGGGATCACTTACCACTT +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSSVLLF*RDHLPL
Trigger: AAGTGGTAAGTGATCCCGCCAAAATAGCAATACACT...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGCTGTTAAGTTGCTCCTaGAGCAGATCTAATCTTTGT +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKLLSCS*SRSNLC
Trigger: ACAAAGATTAGATCTGCTCCAGGAGCAACTTAACAG...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTAATGTCAGTGGTCATTTaGGATTCAAGCCTGTTAAGT +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVMSVVI*DSSLLS
Trigger: ACTTAACAGGCTTGAATCCCAAATGACCACTGACAT...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATATGTCAGTGGTCATTTaGGATTCAAGCCTGTTAAGT +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHMSVVI*DSSLLS
Trigger: ACTTAACAGGCTTGAATCCCAAATGACCACTGACAT...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCAACAGTTTTATCCCTTaGTTTCTTATTTGCGTGGAA +
Preference number: 4 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFNSFIP*FLICVE
Trigger: TTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAGGTTTGTTAGAAAGTaGTCAGAAAACTCAGGATAC +
Preference number: 4 (lower is better)
Translates to: LICVEGIFITKYWFSKSSRFVRK*SENSGY
Trigger: GTATCCTGAGTTTTCTGATCACTTTCTAACAAACCT...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR TCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAATTTGAGTTGCATCCATaGACAGTTTTATCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKFELHP*TVLSLG
Trigger: ACCAAGGGATAAAACTGTTCATGGATGCAACTCAAA...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTAGTAGGAGACTTAAAATaGTTCATGGCTACTGAATCA +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVVGDLK*FMATES
Trigger: TGATTCAGTAGCCATGAAGCATTTTAAGTCTCCTAC...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATTTTGAAGTAGTGTATTaGTATTTTGGCGGGATCACT +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHFEVVY*YFGGIT
Trigger: AGTGATCCCGCCAAAATAGCAATACACTACTTCAAA...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTTTGAAGTAGTGTATTaGTATTTTGGCGGGATCACT +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKFEVVY*YFGGIT
Trigger: AGTGATCCCGCCAAAATAGCAATACACTACTTCAAA...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATCAATCAGGGCAAAGATaGACATTAAGAGCATTAGAA +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHQSGQR*TLRALE
Trigger: TTCTAATGCTCTTAATGTGCATCTTTGCCCTGATTG...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAATTGGTGTAAGTCCATaGGTGCTGGAAATATTCTTC +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKIGVSP*VLEIFF
Trigger: GAAGAATATTTCCAGCACGCATGGACTTACACCAAT...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAATTCAGAGTGAGCTGTaGAATCTTGTTAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKIQSEL*NLVNGA
Trigger: AGCACCATTAACAAGATTCCACAGCTCACTCTGAAT...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGTGTATTGCTATTTTaGCGGGATCACTTACCACTT +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKSVLLF*RDHLPL
Trigger: AAGTGGTAAGTGATCCCGCCAAAATAGCAATACACT...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATCCCGAGTATAGTCTTTaGATAATTGCAGATACATTC +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHPEYSL*IIADTF
Trigger: GAATGTATCTGCAATTATCCAAAGACTATACTCGGG...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTATTTTGCAGCAATGTCTaGTTGAGATGTAGACAAATG +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVFCSNV*LRCRQM
Trigger: CATTTGTCTACATCTCAACCAGACATTGCTGCAAAA...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTTTCAATGGAGCCTCTaGATAAGAAATAAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKFQWSL*IRNKVQ
Trigger: CTGCACTTTATTTCTTATCCAGAGGCTCCATTGAAA...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTATCTGATAATGTCTTATaGTATCTGCAGAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVSDNVL*YLQSLQ
Trigger: CTGAAGACTCTGCAGATACCATAAGACATTATCAGA...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAACCATGCAAGAGAAATTaGAGTTTCCTAACATGCATG +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKPCKRN*SFLTCM
Trigger: CATGCATGTTAGGAAACTCCAATTTCTCTTGCATGG...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR GCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAACAATCAGGGCAAAGATaGACATTAAGAGCATTAGAA +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKQSGQR*TLRALE
Trigger: TTCTAATGCTCTTAATGTGCATCTTTGCCCTGATTG...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAATTTTGCAGCAATGTCTaGTTGAGATGTAGACAAATG +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKFCSNV*LRCRQM
Trigger: CATTTGTCTACATCTCAACCAGACATTGCTGCAAAA...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAATTTCAATGGAGCCTCTaGATAAGAAATAAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKFQWSL*IRNKVQ
Trigger: CTGCACTTTATTTCTTATCCAGAGGCTCCATTGAAA...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAACTTCTGAATCATTCATaGATTGTGATCGTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKLLNHS*IVIVGD
Trigger: ATCTCCTACGATCACAATCCATGAATGATTCAGAAG...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAATCTGATAATGTCTTATaGTATCTGCAGAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKSDNVL*YLQSLQ
Trigger: CTGAAGACTCTGCAGATACCATAAGACATTATCAGA...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAGAAGGATGCCTAATTaGATGAACGTAAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHRRMPN*MNVSFS
Trigger: AGAAAAACTTACGTTCATCCAATTAGGCATCCTTCT...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGAGAAGGATGCCTAATTaGATGAACGTAAGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: NSFIPWFLICVEGIFITKRRMPN*MNVSFS
Trigger: AGAAAAACTTACGTTCATCCAATTAGGCATCCTTCT...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAACTCTTGGTTTTTCACTaGAATTATGTGAGTGTTACA +
Preference number: 4 (lower is better)
Translates to: WFLICVEGIFITKYWFSKLLVFH*NYVSVT
Trigger: TGTAACACTCACATAATTCCAGTGAAAAACCAAGAG...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CCA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAACTCTTGGTTTTTCACTaGAATTATGTGAGTGTTACA +
Preference number: 4 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKLLVFH*NYVSVT
Trigger: TGTAACACTCACATAATTCCAGTGAAAAACCAAGAG...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS TCA 90 bp CCAGGCCAGCGCGCGAGCCGCTCTTTGTGGCAGAGCATCCTCTTTTaGAACCAGAATTCTCTTCCCATTAGCACCACTTCTAGACACCCG +
Preference number: 5 (lower is better)
Translates to: PGQRASRSLWQSILF*NQNSLPISTTSRHP
Trigger: CGGGTGTCTAGAAGTGGTGCTAATGGGAAGAGAATTCTGGTTTCAAAAGAGGATGCTCTGCCACAAAGAGCGGCTCGCGCGCTGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328032.8
ENST00000332142.10
CDS GCA 90 bp CTCTCTTCTGACCCCAGCAATGCCTGGGCAATTTGGGCAATATCATaGCTCTTGGTCTCGGGTCCATGGAGAAAGTCGCAGGTGCATGGC +
Preference number: 5 (lower is better)
Translates to: LSSDPSNAWAIWAIS*LLVSGPWRKSQVHG
Trigger: GCCATGCACCTGCGACTTTCTCCATGGACCCGAGACCAAGAGGCATGATATTGCCCAAATTGCCCAGGCATTGCTGGGGTCAGAAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328032.8
ENST00000332142.10
CDS CCA 90 bp CTGACCCCAGCAATGCCTGGGCAATTTGGGCAATATCATGCCTCTTaGTCTCGGGTCCATGGAGAAAGTCGCAGGTGCATGGCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: LTPAMPGQFGQYHAS*SRVHGESRRCMAFA
Trigger: TGCAAAAGCCATGCACCTGCGACTTTCTCCATGGACCCGAGACCAAGAGGCATGATATTGCCCAAATTGCCCAGGCATTGCTGGGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328032.8
ENST00000332142.10
CDS TCA 90 bp GTTGCTCCTGGAGCAGATCTAATCTTTGTTCCACTTCCCCGTAGGTaGGGTCGCTTTCGGTTTCAGAGATACCCCAGGCAGCTCGCTGAA +
Preference number: 5 (lower is better)
Translates to: VAPGADLIFVPLPRR*GRFRFQRYPRQLAE
Trigger: TTCAGCGAGCTGCCTGGGGTATCTCTGAAACCGAAAGCGACCTCACCTACGGGGAAGTGGAACAAAGATTAGATCTGCTCCAGGAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS GCA 90 bp CTCTTGGTCTCGGGTCCATGGAGAAAGTCGCAGGTGCATGGCTTTTaGATGACATCTGGCCTGGAGAAACCAGTCATCTCACAGAACCCA +
Preference number: 5 (lower is better)
Translates to: LLVSGPWRKSQVHGF*MTSGLEKPVISQNP
Trigger: TGGGTTCTGTGAGATGACTGGTTTCTCCAGGCCAGATGTCATGCAAAAGCCATGCACCTGCGACTTTCTCCATGGACCCGAGACCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328032.8
ENST00000332142.10
CDS CCA 90 bp ATCATGCCTCTTGGTCTCGGGTCCATGGAGAAAGTCGCAGGTGCATaGCTTTTGCATGACATCTGGCCTGGAGAAACCAGTCATCTCACA +
Preference number: 5 (lower is better)
Translates to: IMPLGLGSMEKVAGA*LLHDIWPGETSHLT
Trigger: TGTGAGATGACTGGTTTCTCCAGGCCAGATGTCATGCAAAAGCCATGCACCTGCGACTTTCTCCATGGACCCGAGACCAAGAGGCATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328032.8
ENST00000332142.10
CDS GCA 90 bp AGCTCGCTGAAGTGCAGATGGACTGGAGTCTTCAGGCTGGGGATGTaGATTTTCTCGTTCCCAGCTTCGCATGTCAGTGATATCTTTGCA +
Preference number: 5 (lower is better)
Translates to: SSLKCRWTGVFRLGM*IFSFPASHVSDIFA
Trigger: TGCAAAGATATCACTGACATGCGAAGCTGGGAACGAGAAAATGCACATCCCCAGCCTGAAGACTCCAGTCCATCTGCACTTCAGCGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS CCA 90 bp AAAGGCCCTTCGCTGGCATGTCGGTCTCTAAATATGTTCTTGGGGTaGACGCCGAATCCTTCTATATCATGGACCGAAGATGCTCTCCGT +
Preference number: 5 (lower is better)
Translates to: KGPSLACRSLNMFLG*TPNPSISWTEDALR
Trigger: ACGGAGAGCATCTTCGGTCCATGATATAGAAGGATTCGGCGTCCACCCCAAGAACATATTTAGAGACCGACATGCCAGCGAAGGGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328032.8
ENST00000477019.1
ENST00000621889.1
CDS-3UTR CAA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGCGCGCGAGCCGCTCTTaGTGGCAGAGCATCCTCTTT +
Preference number: 5 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERRASRS*WQSILF
Trigger: AAAGAGGATGCTCTGCCACAAAGAGCGGCTCGCGCG...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS CCA 90 bp CCATTGTCTTCGCTGGCATGTCGGTCTCTAAATATGTTCTTGGGGTaGACGCCGAATCCTTCTATATCATGGACCGAAGATGCTCTCCGT +
Preference number: 5 (lower is better)
Translates to: PLSSLACRSLNMFLG*TPNPSISWTEDALR
Trigger: ACGGAGAGCATCTTCGGTCCATGATATAGAAGGATTCGGCGTCCACCCCAAGAACATATTTAGAGACCGACATGCCAGCGAAGACAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS TCA 90 bp GGACCCATTTTTGTGATAGTAGGTGACCTCCACTTTCCTCTCTTCTaGCCCCAGCAATGCCTGGGCAATTTGGGCAATATCATGCCTCTT +
Preference number: 5 (lower is better)
Translates to: GPIFVIVGDLHFPLF*PQQCLGNLGNIMPL
Trigger: AAGAGGCATGATATTGCCCAAATTGCCCAGGCATTGCTGGGGTCAGAAGAGAGGAAAGTGGAGGTCACCTACTATCACAAAAATGGGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328032.8
ENST00000332142.10
CDS GCA 90 bp AGGAATGGTCAAGAGGTCCGGATATATTCACCAAGGGAGAACATTTaGTGGGCTGTATCAAAGCTTTTGTGTCATCTGCTTCAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: RNGQEVRIYSPRENI*WAVSKLLCHLLQRG
Trigger: GCCCCTCTGAAGCAGATGACACAAAAGCTTTGATACAGCCCAGCAAATGTTCTCCCTTGGTGAATATATCCGGACCTCTTGACCATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328032.8
ENST00000332142.10
ENST00000477019.1
ENST00000618399.4
ENST00000621889.1
CDS CCA 90 bp AATGGTCAAGAGGTCCGGATATATTCACCAAGGGAGAACATTTGCTaGGCTGTATCAAAGCTTTTGTGTCATCTGCTTCAGAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: NGQEVRIYSPRENIC*AVSKLLCHLLQRGC
Trigger: GCAGCCCCTCTGAAGCAGATGACACAAAAGCTTTGATACAGCCCAGCAAATGTTCTCCCTTGGTGAATATATCCGGACCTCTTGACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328032.8
ENST00000332142.10
ENST00000477019.1
ENST00000618399.4
ENST00000621889.1
CDS-3UTR CAA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAACTGCGCACAGGCATGTaGGCCCCGGTCTTCCGAGGA +
Preference number: 5 (lower is better)
Translates to: WFLICVEGIFITKYWFSKLRTGM*APVFRG
Trigger: TCCTCGGAAGACCGGGGCCAACATGCCTGTGCGCAG...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR CAA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCGGGACAGCTGGGAACTaGACTGCAGCATGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFGTAGN*TAACQG
Trigger: ACCCTGACATGCTGCAGTCAAGTTCCCAGCTGTCCC...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGGATGGATGCTTCCGGTaGACTGGTTCTCATCAGCTG +
Preference number: 5 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERDGCFR*TGSHQL
Trigger: CAGCTGATGAGAACCAGTCAACCGGAAGCATCCATC...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCGCAGGTGCATGGCTTTaGCATGACATCTGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFAGAWL*HDIWPG
Trigger: TCCAGGCCAGATGTCATGCAAAAGCCATGCACCTGC...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS TCA 90 bp TTGAGGTTTGAATCTGATGTGGATCCCAGGAGGCTTGACTTGATATaGTTAAAAGGCCCTTTGACATTGCGACCATTGTCTTCGCTGGCA +
Preference number: 5 (lower is better)
Translates to: LRFESDVDPRRLDLI*LKGPLTLRPLSSLA
Trigger: TGCCAGCGAAGACAATGGTCGCAATGTCAAAGGGCCTTTTAATCATATCAAGTCAAGCCTCCTGGGATCCACATCAGATTCAAACCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS TCA 90 bp GAGCCCAGATGCTTTCCCTATTCCTGGAGAAGAGTCTACTATTCCTaGGAAGAGCGGCTTTTGTTCATCATCAATGGAGGAGATGAAAGA +
Preference number: 5 (lower is better)
Translates to: EPRCFPYSWRRVYYS*EERLLFIINGGDER
Trigger: TCTTTCATCTCCTCCATTGATGATGAACAAAAGCCGCTCTTCTCAGGAATAGTAGACTCTTCTCCAGGAATAGGGAAAGCATCTGGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS TCA 90 bp CATTTGATGAACTCCATTCTGCCAGGTGTTCTACTAAGGCCCTCGTaGTGTAGGGATAAAGAGATCCTGGGTCACTTTCTCAGTCACATT +
Preference number: 5 (lower is better)
Translates to: HLMNSILPGVLLRPS*CRDKEILGHFLSHI
Trigger: AATGTGACTGAGAAAGTGACCCAGGATCTCTTTATCCCTACATCACGAGGGCCTTAGTAGAACACCTGGCAGAATGGAGTTCATCAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477019.1
CDS-3UTR CAA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTGGGACAGCTGGGAACTaGACTGCAGCATGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: LICVEGIFITKYWFSKSSGTAGN*TAACQG
Trigger: ACCCTGACATGCTGCAGTCAAGTTCCCAGCTGTCCC...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGTCTCTAAATATGTTCTaGGGGTGGACGCCGAATCCT +
Preference number: 5 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERSLNMF*GWTPNP
Trigger: AGGATTCGGCGTCCACCCCAAGAACATATTTAGAGA...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCGTAGGAGATCAGCCTTaGCGCTCTCATGCCTTAGGT +
Preference number: 5 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFVGDQP*RSHALG
Trigger: ACCTAAGGCATGAGAGCGCAAAGGCTGATCTCCTAC...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGTGCAATATCGTAAACTaGTTGATGCGTGGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERCNIVN*LMRGVC
Trigger: GCAGACACCACGCATCAACAAGTTTACGATATTGCA...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGGATGTCAGTGGTCATTaGGGATTCAAGCCTGTTAAG +
Preference number: 5 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERDVSGH*GFKPVK
Trigger: CTTAACAGGCTTGAATCCCAAATGACCACTGACATC...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS TCA 90 bp GATATCTTTGCAAGAGTGACTTCTTTTATCTATGTGCATTCTTCCTaGGGTGGGCACTGTTTCTTCAAAATCGAGCCCAGATGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: DIFARVTSFIYVHSS*GGHCFFKIEPRCFP
Trigger: GGGAAAGCATCTGGGCTCGATTTTGAAGAAACAGTGCCCACCTCAGGAAGAATGCACATAGATAAAAGAAGTCACTCTTGCAAAGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS TCA 90 bp CAAAATGATTATTTCCCTGGAAGACCAGGATCAGAAACATGCCTATaGAGACCCACGATTCCTACAGTGCTTAGGGATGAATCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: QNDYFPGRPGSETCL*RPTIPTVLRDESGK
Trigger: TTTGCCAGATTCATCCCTAAGCACTGTAGGAATCGTGGGTCTTCATAGGCATGTTTCTGATCCTGGTCTTCCAGGGAAATAATCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS CCA 90 bp CTTTGCAAGAGTGACTTCTTTTATCTATGTGCATTCTTCCTGAGGTaGGCACTGTTTCTTCAAAATCGAGCCCAGATGCTTTCCCTATTC +
Preference number: 5 (lower is better)
Translates to: LCKSDFFYLCAFFLR*ALFLQNRAQMLSLF
Trigger: GAATAGGGAAAGCATCTGGGCTCGATTTTGAAGAAACAGTGCCCACCTCAGGAAGAATGCACATAGATAAAAGAAGTCACTCTTGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGGTAGAGTCGGTCCCATaGCCTTTTGGGAGAGGAATG +
Preference number: 5 (lower is better)
Translates to: NSFIPWFLICVEGIFITKVESVP*PFGRGM
Trigger: CATTCCTCTCCCAAAAGGCAATGGGACCGACTCTAC...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGGTGAGCTGTGGAATCTaGTTAATGGTGCTGTATTTG +
Preference number: 5 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERVSCGI*LMVLYL
Trigger: CAAATACAGCACCATTAACAAGATTCCACAGCTCAC...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGGCAAGTCAAAAGGAATaGCTGCAACCATGTCAATCA +
Preference number: 5 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERASQKE*LQPCQS
Trigger: TGATTGACATGGTTGCAGCAATTCCTTTTGACTTGC...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGCCCTTGGTTTCTTATTaGCGTGGAAGGCATTTTCAT +
Preference number: 5 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERPLVSY*RGRHFH
Trigger: ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGG...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS GCA 90 bp TCGCTGAATCTTATGCAAGTCACAGTATGTGAGGGCTCTTACATCTaGATTAGACTTTCCAGGTTTGGCATAAAGATGAACCATTTCTCC +
Preference number: 5 (lower is better)
Translates to: SLNLMQVTVCEGSYI*IRLSRFGIKMNHFS
Trigger: GGAGAAATGGTTCATCTTTATGCCAAACCTGGAAAGTCTAATGCAGATGTAAGAGCCCTCACATACTGTGACTTGCATAAGATTCAGCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAGCAATATCATGCCTCTaGGTCTCGGGTCCATGGAGA +
Preference number: 5 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKAISCL*VSGPWR
Trigger: TCTCCATGGACCCGAGACCAAGAGGCATGATATTGC...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR CAA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAACGGTCCCATTGCCTTTaGGGAGAGGAATGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKRSHCL*GEEWSR
Trigger: TCTTGACCATTCCTCTCCCAAAAGGCAATGGGACCG...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAACGGTCCCATTGCCTTTaGGGAGAGGAATGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: WFLICVEGIFITKYWFSKRSHCL*GEEWSR
Trigger: TCTTGACCATTCCTCTCCCAAAAGGCAATGGGACCG...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCTACATAAGCTTTCCCTaGATCTGGAATGGGACAGCT +
Preference number: 5 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFYISFP*IWNGTA
Trigger: AGCTGTCCCATTCCAGATCAAGGGAAAGCTTATGTA...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTATGTTCTTCTCTGTCATaGAGGAGGAAGGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVCSSLS*RRKAAE
Trigger: CTCTGCAGCCTTCCTCCTCAATGACAGAGAAGAACA...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGGACCAATTAATGTTGTaGTCTCATCAGAACCTGATC +
Preference number: 5 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERDQLML*SHQNLI
Trigger: GATCAGGTTCTGATGAGACAACAACATTAATTGGTC...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAGATGGATGCTTCCGGTaGACTGGTTCTCATCAGCTG +
Preference number: 5 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKDGCFR*TGSHQL
Trigger: CAGCTGATGAGAACCAGTCAACCGGAAGCATCCATC...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGGAACAGTTTTATCCCTaGGTTTCTTATTTGCGTGGA +
Preference number: 5 (lower is better)
Translates to: TVLLHIMVPCEPLSQVEREQFYP*VSYLRG
Trigger: TCCACGCAAATAAGAAACCAAGGGATAAAACTGTTC...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS TCA 90 bp GAAAACTCAGGATACATATCCAAAACCTCTAACAAGTCTTCTCGCTaGATCTTATGCAAGTCACAGTATGTGAGGGCTCTTACATCTGCA +
Preference number: 5 (lower is better)
Translates to: ENSGYISKTSNKSSR*ILCKSQYVRALTSA
Trigger: TGCAGATGTAAGAGCCCTCACATACTGTGACTTGCATAAGATTCAGCGAGAAGACTTGTTAGAGGTTTTGGATATGTATCCTGAGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACAATGCCTGGGCAATTaGGGCAATATCATGCCTCTT +
Preference number: 5 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVQCLGN*GNIMPL
Trigger: AAGAGGCATGATATTGCCCAAATTGCCCAGGCATTG...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332142.10
CDS-3UTR CAA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGACCAAGGGAGAACATTaGCTGGGCTGTATCAAAGCT +
Preference number: 5 (lower is better)
Translates to: NSFIPWFLICVEGIFITKTKGEH*LGCIKA
Trigger: AGCTTTGATACAGCCCAGCAAATGTTCTCCCTTGGT...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATCGTGGTGTCTGCAGTTaGTATTCAGGTAGGACATCT +
Preference number: 5 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHRGVCS*YSGRTS
Trigger: AGATGTCCTACCTGAATACAAACTGCAGACACCACG...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGATATTCTTCAAGACGTaGCCTCAGAGGGTTGGGGAT +
Preference number: 5 (lower is better)
Translates to: NSFIPWFLICVEGIFITKIFFKT*PQRVGD
Trigger: ATCCCCAACCCTCTGAGGCAACGTCTTGAAGAATAT...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAAAGGCCCTTTGACATaGCGACCATTGTCTTCGCTG +
Preference number: 5 (lower is better)
Translates to: WFLICVEGIFITKYWFSKKGPLT*RPLSSL
Trigger: CAGCGAAGACAATGGTCGCAATGTCAAAGGGCCTTT...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCTGCAGCAATGTCTGGTaGAGATGTAGACAAATGTCT +
Preference number: 5 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFCSNVW*RCRQMS
Trigger: AGACATTTGTCTACATCTCAACCAGACATTGCTGCA...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTAGGTGCATGGGTGGTTTaGAACTTCATTGCCAAAGCT +
Preference number: 5 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVGAWVV*NFIAKA
Trigger: AGCTTTGGCAATGAAGTTCAAAACCACCCATGCACC...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ACAGTACTTTTGCATATAATGGTACCTTGTGAGCCCCTGAGTCAAGTAGAGAGGCTTCTTAGTTTACAGTaGTCTCCTTCTGAATCATTC +
Preference number: 5 (lower is better)
Translates to: TVLLHIMVPCEPLSQVERLLSLQ*SPSESF
Trigger: GAATGATTCAGAAGGAGACAACTGTAAACTAAGAAG...CCTCTCTACTTGACTCAGGGGCTCACAAGGTACCATTATATGCAAAAGTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCGAGGATCATCTGAATTaGAGTTGCATCCATGAACAG +
Preference number: 5 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFEDHLN*SCIHEQ
Trigger: CTGTTCATGGATGCAACTCAAATTCAGATGATCCTC...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACATAGCCACGCCCTCTaGGTTTTTCACTGGAATTAT +
Preference number: 5 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVHSHAL*VFHWNY
Trigger: ATAATTCCAGTGAAAAACCAAGAGGGCGTGGCTATG...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGGCTGTATCAAAGCTTTaGTGTCATCTGCTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: NSFIPWFLICVEGIFITKAVSKL*CHLLQR
Trigger: CCTCTGAAGCAGATGACACAAAAGCTTTGATACAGC...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATGGTGCTGTATTTGTaGAGGTTTGAATCTGATGTG +
Preference number: 5 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFMVLYL*RFESDV
Trigger: CACATCAGATTCAAACCTCAACAAATACAGCACCAT...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAACGTGGTGTCTGCAGTTaGTATTCAGGTAGGACATCT +
Preference number: 5 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKRGVCS*YSGRTS
Trigger: AGATGTCCTACCTGAATACAAACTGCAGACACCACG...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTATGCAATATCGTAAACTaGTTGATGCGTGGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVCNIVN*LMRGVC
Trigger: GCAGACACCACGCATCAACAAGTTTACGATATTGCA...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGAAAGGCTTTGCAGTTTaGCAGCAATGTCTGGTTGAG +
Preference number: 5 (lower is better)
Translates to: NSFIPWFLICVEGIFITKKGFAV*QQCLVE
Trigger: CTCAACCAGACATTGCTGCAAAACTGCAAAGCCTTT...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAGGCTTTGCAGTTTaGCAGCAATGTCTGGTTGAG +
Preference number: 5 (lower is better)
Translates to: LICVEGIFITKYWFSKSSKGFAV*QQCLVE
Trigger: CTCAACCAGACATTGCTGCAAAACTGCAAAGCCTTT...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp GCATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCAAAAGTGAAGTCAAGTaGTCTTCTGAAGCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: ASMNSFIPWFLICVEGIFKSEVK*SSEAVF
Trigger: GAACACAGCTTCAGAAGACAACTTGACTTCACTTTT...GAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS GCA 90 bp CTCTTCAAAGTGTCTCTTGGAACTCTGATAATGTCTTATGGTATCTaGAGAGTCTTCAGGATCATTTGTACTGTTTTCTTTCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LFKVSLGTLIMSYGI*RVFRIICTVFFLSF
Trigger: GAAGGAGAGAAAGAAAACAGTACAAATGATCCTGAAGACTCTGCAGATACCATAAGACATTATCAGAGTTCCAAGAGACACTTTGAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAACATAGCCACGCCCTCTaGGTTTTTCACTGGAATTAT +
Preference number: 5 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKHSHAL*VFHWNY
Trigger: ATAATTCCAGTGAAAAACCAAGAGGGCGTGGCTATG...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTGTGAGCTGTGGAATCTaGTTAATGGTGCTGTATTTG +
Preference number: 5 (lower is better)
Translates to: LICVEGIFITKYWFSKSSVSCGI*LMVLYL
Trigger: CAAATACAGCACCATTAACAAGATTCCACAGCTCAC...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTAAATATCGTAAACTTGTaGATGCGTGGTGTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVNIVNL*MRGVCS
Trigger: ACTGCAGACACCACGCATCAACAAGTTTACGATATT...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTGCAAGTCAAAAGGAATaGCTGCAACCATGTCAATCA +
Preference number: 5 (lower is better)
Translates to: LICVEGIFITKYWFSKSSASQKE*LQPCQS
Trigger: TGATTGACATGGTTGCAGCAATTCCTTTTGACTTGC...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAATGGATGGTCCAGAACTaGAGTCACTGTCATTGTAAC +
Preference number: 5 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKWMVQN*SHCHCN
Trigger: GTTACAATGACAGTGACTCAAGTTCTGGACCATCCA...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAGATGTCAGTGGTCATTaGGGATTCAAGCCTGTTAAG +
Preference number: 5 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKDVSGH*GFKPVK
Trigger: CTTAACAGGCTTGAATCCCAAATGACCACTGACATC...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS TCA 90 bp CTCTCATGCCTTAGGTTGAAAGTCAACTCTAGGTTTGTTAGAAAGTaGTCAGAAAACTCAGGATACATATCCAAAACCTCTAACAAGTCT +
Preference number: 5 (lower is better)
Translates to: LSCLRLKVNSRFVRK*SENSGYISKTSNKS
Trigger: AGACTTGTTAGAGGTTTTGGATATGTATCCTGAGTTTTCTGATCACTTTCTAACAAACCTAGAGTTGACTTTCAACCTAAGGCATGAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGATGGTGCTGTATTTGTaGAGGTTTGAATCTGATGTG +
Preference number: 5 (lower is better)
Translates to: NSFIPWFLICVEGIFITKMVLYL*RFESDV
Trigger: CACATCAGATTCAAACCTCAACAAATACAGCACCAT...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAAATATCGTAAACTTGTaGATGCGTGGTGTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKNIVNL*MRGVCS
Trigger: ACTGCAGACACCACGCATCAACAAGTTTACGATATT...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAATGCAGCAATGTCTGGTaGAGATGTAGACAAATGTCT +
Preference number: 5 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKCSNVW*RCRQMS
Trigger: AGACATTTGTCTACATCTCAACCAGACATTGCTGCA...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTACCACAATGTCATCTTaGAGAATTTCAATGGAGCCT +
Preference number: 5 (lower is better)
Translates to: LICVEGIFITKYWFSKSSTTMSS*RISMEP
Trigger: AGGCTCCATTGAAATTCTCAAAGATGACATTGTGGT...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp AACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGACCACAATGTCATCTTaGAGAATTTCAATGGAGCCT +
Preference number: 5 (lower is better)
Translates to: NSFIPWFLICVEGIFITKTTMSS*RISMEP
Trigger: AGGCTCCATTGAAATTCTCAAAGATGACATTGTGGT...CTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTAAAAAGTGAAGTCAAGTaGTCTTCTGAAGCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVKSEVK*SSEAVF
Trigger: GAACACAGCTTCAGAAGACAACTTGACTTCACTTTT...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ATCCATGAACAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATTCCATGCAAGAGAAATaGGAGTTTCCTAACATGCAT +
Preference number: 5 (lower is better)
Translates to: IHEQFYPLVSYLRGRHFHSMQEK*EFPNMH
Trigger: ATGCATGTTAGGAAACTCCAATTTCTCTTGCATGGA...ATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTGTTCATGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTATCCATGCAAGAGAAATaGGAGTTTCCTAACATGCAT +
Preference number: 5 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVSMQEK*EFPNMH
Trigger: ATGCATGTTAGGAAACTCCAATTTCTCTTGCATGGA...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAGAGGATCATCTGAATTaGAGTTGCATCCATGAACAG +
Preference number: 5 (lower is better)
Translates to: WFLICVEGIFITKYWFSKEDHLN*SCIHEQ
Trigger: CTGTTCATGGATGCAACTCAAATTCAGATGATCCTC...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp CAGTTTTATCCCTTGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTAGTTCGATCTTTAACCTaGGGTGCAATAATGGTTTTA +
Preference number: 5 (lower is better)
Translates to: QFYPLVSYLRGRHFHNEVVRSLT*GAIMVL
Trigger: TAAAACCATTATTGCACCCAAGGTTAAAGATCGAAC...TACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCAAGGGATAAAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAGACCAATTAATGTTGTaGTCTCATCAGAACCTGATC +
Preference number: 5 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKDQLML*SHQNLI
Trigger: GATCAGGTTCTGATGAGACAACAACATTAATTGGTC...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp CTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAAGACCAATTAATGTaGTTGTCTCATCAGAACCTG +
Preference number: 5 (lower is better)
Translates to: LICVEGIFITKYWFSKSSKDQLM*LSHQNL
Trigger: CAGGTTCTGATGAGACAACAACATTAATTGGTCTTT...ACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp ATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAGCAGTAAACATTCCCAAAAATGCTaGCATACATTAGTGAGCCAA +
Preference number: 5 (lower is better)
Translates to: ICVEGIFITKYWFSKSSKHSQKC*HTLVSQ
Trigger: TTGGCTCACTAATGTATGCAAGCATTTTTGGGAATG...TTTACTGCTTTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAACATTCCCAAAAATGCTaGCATACATTAGTGAGCCAA +
Preference number: 5 (lower is better)
Translates to: WFLICVEGIFITKYWFSKHSQKC*HTLVSQ
Trigger: TTGGCTCACTAATGTATGCAAGCATTTTTGGGAATG...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAGAACAGTTTTATCCCTaGGTTTCTTATTTGCGTGGA +
Preference number: 5 (lower is better)
Translates to: WFLICVEGIFITKYWFSKEQFYP*VSYLRG
Trigger: TCCACGCAAATAAGAAACCAAGGGATAAAACTGTTC...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAGTTCGATCTTTAACCTaGGGTGCAATAATGGTTTTA +
Preference number: 5 (lower is better)
Translates to: WFLICVEGIFITKYWFSKVRSLT*GAIMVL
Trigger: TAAAACCATTATTGCACCCAAGGTTAAAGATCGAAC...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS-3UTR CAA 90 bp TGGTTTCTTATTTGCGTGGAAGGCATTTTCATAACGAAGTACTGGTTTAGTAAAAAAGACCAATTAATGTaGTTGTCTCATCAGAACCTG +
Preference number: 5 (lower is better)
Translates to: WFLICVEGIFITKYWFSKKDQLM*LSHQNL
Trigger: CAGGTTCTGATGAGACAACAACATTAATTGGTCTTT...TTTACTAAACCAGTACTTCGTTATGAAAATGCCTTCCACGCAAATAAGAAACCA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS CCA 72 bp GGCCCCGGTCTTCCGAGGAGCGCTCCCCCGGAGCTCTaGAGTTCTCCCGGGATCTCTCCTCGGCTAGAGCCC +
Preference number: 6 (lower is better)
Translates to: GPGLPRSAPPEL*SSPGISPRLEP
Trigger: GGGCTCTAGCCGAGGAGAGATCCCGGGAGAACTCCAGAGCTCCGGGGGAGCGCTCCTCGGAAGACCGGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328032.8
ENST00000332142.10
CDS GCA 72 bp TTCGGTTTCAGAGATACCCCAGGCAGCTCGCTGAAGTaGAGATGGACTGGAGTCTTCAGGCTGGGGATGTGC +
Preference number: 6 (lower is better)
Translates to: FGFRDTPGSSLK*RWTGVFRLGMC
Trigger: GCACATCCCCAGCCTGAAGACTCCAGTCCATCTGCACTTCAGCGAGCTGCCTGGGGTATCTCTGAAACCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS CAA 90 bp CCTCTTGGTCTCGGGTCCATGGAGAAAGTCGCAGGTGCATGGCTTTaGCATGACATCTGGCCTGGAGAAACCAGTCATCTCACAGAACCC +
Preference number: 6 (lower is better)
Translates to: PLGLGSMEKVAGAWL*HDIWPGETSHLTEP
Trigger: GGGTTCTGTGAGATGACTGGTTTCTCCAGGCCAGATGTCATGCAAAAGCCATGCACCTGCGACTTTCTCCATGGACCCGAGACCAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328032.8
ENST00000332142.10
CDS CAA 90 bp TCTGACCCCAGCAATGCCTGGGCAATTTGGGCAATATCATGCCTCTaGGTCTCGGGTCCATGGAGAAAGTCGCAGGTGCATGGCTTTTGC +
Preference number: 6 (lower is better)
Translates to: SDPSNAWAIWAISCL*VSGPWRKSQVHGFC
Trigger: GCAAAAGCCATGCACCTGCGACTTTCTCCATGGACCCGAGACCAAGAGGCATGATATTGCCCAAATTGCCCAGGCATTGCTGGGGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328032.8
ENST00000332142.10
CDS CCA 72 bp GCAATGCCTGGGCAATTTGGGCAATATCATGCCTCTTaGTCTCGGGTCCATGGAGAAAGTCGCAGGTGCATG +
Preference number: 6 (lower is better)
Translates to: AMPGQFGQYHAS*SRVHGESRRCM
Trigger: CATGCACCTGCGACTTTCTCCATGGACCCGAGACCAAGAGGCATGATATTGCCCAAATTGCCCAGGCATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328032.8
ENST00000332142.10
CDS CAA 72 bp CTCGGGTCCATGGAGAAAGTCGCAGGTGCATGGCTTTaGCATGACATCTGGCCTGGAGAAACCAGTCATCTC +
Preference number: 6 (lower is better)
Translates to: LGSMEKVAGAWL*HDIWPGETSHL
Trigger: GAGATGACTGGTTTCTCCAGGCCAGATGTCATGCAAAAGCCATGCACCTGCGACTTTCTCCATGGACCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328032.8
ENST00000332142.10
CDS TCA 72 bp GGAGCAGATCTAATCTTTGTTCCACTTCCCCGTAGGTaGGGTCGCTTTCGGTTTCAGAGATACCCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: GADLIFVPLPRR*GRFRFQRYPRQ
Trigger: CTGCCTGGGGTATCTCTGAAACCGAAAGCGACCTCACCTACGGGGAAGTGGAACAAAGATTAGATCTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS GCA 72 bp TCGGGTCCATGGAGAAAGTCGCAGGTGCATGGCTTTTaGATGACATCTGGCCTGGAGAAACCAGTCATCTCA +
Preference number: 6 (lower is better)
Translates to: SGPWRKSQVHGF*MTSGLEKPVIS
Trigger: TGAGATGACTGGTTTCTCCAGGCCAGATGTCATGCAAAAGCCATGCACCTGCGACTTTCTCCATGGACCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328032.8
ENST00000332142.10
CDS CAA 72 bp AGCAATGCCTGGGCAATTTGGGCAATATCATGCCTCTaGGTCTCGGGTCCATGGAGAAAGTCGCAGGTGCAT +
Preference number: 6 (lower is better)
Translates to: SNAWAIWAISCL*VSGPWRKSQVH
Trigger: ATGCACCTGCGACTTTCTCCATGGACCCGAGACCAAGAGGCATGATATTGCCCAAATTGCCCAGGCATTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328032.8
ENST00000332142.10
CDS CAA 72 bp AGCTTTCCCTTGATCTGGAATGGGACAGCTGGGAACTaGACTGCAGCATGTCAGGGTAGAGTCGGTCCCATT +
Preference number: 6 (lower is better)
Translates to: SFPLIWNGTAGN*TAACQGRVGPI
Trigger: AATGGGACCGACTCTACCCTGACATGCTGCAGTCAAGTTCCCAGCTGTCCCATTCCAGATCAAGGGAAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328032.8
ENST00000332142.10
ENST00000477019.1
ENST00000618399.4
ENST00000621889.1
CDS CAA 72 bp GGCCCTTCGCTGGCATGTCGGTCTCTAAATATGTTCTaGGGGTGGACGCCGAATCCTTCTATATCATGGACC +
Preference number: 6 (lower is better)
Translates to: GPSLACRSLNMF*GWTPNPSISWT
Trigger: GGTCCATGATATAGAAGGATTCGGCGTCCACCCCAAGAACATATTTAGAGACCGACATGCCAGCGAAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328032.8
ENST00000477019.1
ENST00000621889.1
CDS TCA 72 bp CGCGCGAGCCGCTCTTTGTGGCAGAGCATCCTCTTTTaGAACCAGAATTCTCTTCCCATTAGCACCACTTCT +
Preference number: 6 (lower is better)
Translates to: RASRSLWQSILF*NQNSLPISTTS
Trigger: AGAAGTGGTGCTAATGGGAAGAGAATTCTGGTTTCAAAAGAGGATGCTCTGCCACAAAGAGCGGCTCGCGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328032.8
ENST00000332142.10
CDS GCA 72 bp AAGTGCAGATGGACTGGAGTCTTCAGGCTGGGGATGTaGATTTTCTCGTTCCCAGCTTCGCATGTCAGTGAT +
Preference number: 6 (lower is better)
Translates to: KCRWTGVFRLGM*IFSFPASHVSD
Trigger: ATCACTGACATGCGAAGCTGGGAACGAGAAAATGCACATCCCCAGCCTGAAGACTCCAGTCCATCTGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS CCA 72 bp GAGAAAGTCGCAGGTGCATGGCTTTTGCATGACATCTaGCCTGGAGAAACCAGTCATCTCACAGAACCCATC +
Preference number: 6 (lower is better)
Translates to: EKVAGAWLLHDI*PGETSHLTEPI
Trigger: GATGGGTTCTGTGAGATGACTGGTTTCTCCAGGCCAGATGTCATGCAAAAGCCATGCACCTGCGACTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328032.8
ENST00000332142.10
CDS CAA 90 bp TACTACATAAGCTTTCCCTTGATCTGGAATGGGACAGCTGGGAACTaGACTGCAGCATGTCAGGGTAGAGTCGGTCCCATTGCCTTTTGG +
Preference number: 6 (lower is better)
Translates to: YYISFPLIWNGTAGN*TAACQGRVGPIAFW
Trigger: CCAAAAGGCAATGGGACCGACTCTACCCTGACATGCTGCAGTCAAGTTCCCAGCTGTCCCATTCCAGATCAAGGGAAAGCTTATGTAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328032.8
ENST00000332142.10
ENST00000477019.1
ENST00000618399.4
ENST00000621889.1
CDS CAA 72 bp GCTGAAACTTCGGTCAGTTTTGATGGATGCTTCCGGTaGACTGGTTCTCATCAGCTGGATGATGGGTCTCTG +
Preference number: 6 (lower is better)
Translates to: AETSVSFDGCFR*TGSHQLDDGSL
Trigger: CAGAGACCCATCATCCAGCTGATGAGAACCAGTCAACCGGAAGCATCCATCAAAACTGACCGAAGTTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS CAA 90 bp TTGCGACCATTGTCTTCGCTGGCATGTCGGTCTCTAAATATGTTCTaGGGGTGGACGCCGAATCCTTCTATATCATGGACCGAAGATGCT +
Preference number: 6 (lower is better)
Translates to: LRPLSSLACRSLNMF*GWTPNPSISWTEDA
Trigger: AGCATCTTCGGTCCATGATATAGAAGGATTCGGCGTCCACCCCAAGAACATATTTAGAGACCGACATGCCAGCGAAGACAATGGTCGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS TCA 72 bp TTTGTGATAGTAGGTGACCTCCACTTTCCTCTCTTCTaGCCCCAGCAATGCCTGGGCAATTTGGGCAATATC +
Preference number: 6 (lower is better)
Translates to: FVIVGDLHFPLF*PQQCLGNLGNI
Trigger: GATATTGCCCAAATTGCCCAGGCATTGCTGGGGTCAGAAGAGAGGAAAGTGGAGGTCACCTACTATCACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328032.8
ENST00000332142.10
CDS TCA 72 bp GAATCTGATGTGGATCCCAGGAGGCTTGACTTGATATaGTTAAAAGGCCCTTCGCTGGCATGTCGGTCTCTA +
Preference number: 6 (lower is better)
Translates to: ESDVDPRRLDLI*LKGPSLACRSL
Trigger: TAGAGACCGACATGCCAGCGAAGGGCCTTTTAATCATATCAAGTCAAGCCTCCTGGGATCCACATCAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328032.8
ENST00000477019.1
ENST00000621889.1
CDS CCA 72 bp TCGCTGGCATGTCGGTCTCTAAATATGTTCTTGGGGTaGACGCCGAATCCTTCTATATCATGGACCGAAGAT +
Preference number: 6 (lower is better)
Translates to: SLACRSLNMFLG*TPNPSISWTED
Trigger: ATCTTCGGTCCATGATATAGAAGGATTCGGCGTCCACCCCAAGAACATATTTAGAGACCGACATGCCAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328032.8
ENST00000332142.10
ENST00000477019.1
ENST00000618399.4
ENST00000621889.1
CDS CCA 72 bp GGACCACAGTGGTTTGTTTCTGCAGCAACTGTAAGATaGTCTGGATGTCAGTGGTCATTTGGGATTCAAGCC +
Preference number: 6 (lower is better)
Translates to: GPQWFVSAATVR*SGCQWSFGIQA
Trigger: GGCTTGAATCCCAAATGACCACTGACATCCAGACCATCTTACAGTTGCTGCAGAAACAAACCACTGTGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS CAA 72 bp TTCAAATTTCCGAATGATGGTCCCCAGAAATGTATTTaGTGGTGCCACATGCCCCCTGCGCACAGGCATGTT +
Preference number: 6 (lower is better)
Translates to: FKFPNDGPQKCI*WCHMPPAHRHV
Trigger: AACATGCCTGTGCGCAGGGGGCATGTGGCACCACAAAATACATTTCTGGGGACCATCATTCGGAAATTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328032.8
ENST00000332142.10
CDS CAA 72 bp TTGTCTTCGCTGGCATGTCGGTCTCTAAATATGTTCTaGGGGTGGACGCCGAATCCTTCTATATCATGGACC +
Preference number: 6 (lower is better)
Translates to: LSSLACRSLNMF*GWTPNPSISWT
Trigger: GGTCCATGATATAGAAGGATTCGGCGTCCACCCCAAGAACATATTTAGAGACCGACATGCCAGCGAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS CAA 90 bp GAGGAATGGTCAAGAGGTCCGGATATATTCACCAAGGGAGAACATTaGCTGGGCTGTATCAAAGCTTTTGTGTCATCTGCTTCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: EEWSRGPDIFTKGEH*LGCIKAFVSSASEG
Trigger: CCCCTCTGAAGCAGATGACACAAAAGCTTTGATACAGCCCAGCAAATGTTCTCCCTTGGTGAATATATCCGGACCTCTTGACCATTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328032.8
ENST00000332142.10
ENST00000477019.1
ENST00000618399.4
ENST00000621889.1
CDS GCA 72 bp GAACTTCATTGCCAAAGCTCTAAGGCAACCTTTACTTaGCCCCCGAAAGGCTTTGCAGTTTTGCAGCAATGT +
Preference number: 6 (lower is better)
Translates to: ELHCQSSKATFT*PPKGFAVLQQC
Trigger: ACATTGCTGCAAAACTGCAAAGCCTTTCGGGGGGCAAGTAAAGGTTGCCTTAGAGCTTTGGCAATGAAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS GCA 72 bp TGGTGTAGGGCCCAAGAACTTGCACTTCAAACACATTaGAAGGTGATGCTGATGGTCTCACACTTGAAGAAC +
Preference number: 6 (lower is better)
Translates to: WCRAQELALQTH*KVMLMVSHLKN
Trigger: GTTCTTCAAGTGTGAGACCATCAGCATCACCTTGCAATGTGTTTGAAGTGCAAGTTCTTGGGCCCTACACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477019.1
CDS TCA 72 bp TATTTCCCTGGAAGACCAGGATCAGAAACATGCCTATaGAGACCCACGATTCCTACAGTGCTTAGGGATGAA +
Preference number: 6 (lower is better)
Translates to: YFPGRPGSETCL*RPTIPTVLRDE
Trigger: TTCATCCCTAAGCACTGTAGGAATCGTGGGTCTTCATAGGCATGTTTCTGATCCTGGTCTTCCAGGGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS CCA 72 bp GAGGTCCGGATATATTCACCAAGGGAGAACATTTGCTaGGCTGTATCAAAGCTTTTGTGTCATCTGCTTCAG +
Preference number: 6 (lower is better)
Translates to: EVRIYSPRENIC*AVSKLLCHLLQ
Trigger: CTGAAGCAGATGACACAAAAGCTTTGATACAGCCCAGCAAATGTTCTCCCTTGGTGAATATATCCGGACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328032.8
ENST00000332142.10
ENST00000477019.1
ENST00000618399.4
ENST00000621889.1
CDS CCA 72 bp ATGTTCTTGGGGTGGACGCCGAATCCTTCTATATCATaGACCGAAGATGCTCTCCGTATACTACATAAGCTT +
Preference number: 6 (lower is better)
Translates to: MFLGWTPNPSIS*TEDALRILHKL
Trigger: AAGCTTATGTAGTATACGGAGAGCATCTTCGGTCCATGATATAGAAGGATTCGGCGTCCACCCCAAGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328032.8
ENST00000332142.10
ENST00000477019.1
ENST00000618399.4
ENST00000621889.1
CDS TCA 72 bp GAATCTGATGTGGATCCCAGGAGGCTTGACTTGATATaGTTAAAAGGCCCTTTGACATTGCGACCATTGTCT +
Preference number: 6 (lower is better)
Translates to: ESDVDPRRLDLI*LKGPLTLRPLS
Trigger: AGACAATGGTCGCAATGTCAAAGGGCCTTTTAATCATATCAAGTCAAGCCTCCTGGGATCCACATCAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS TCA 72 bp TGCTTTCCCTATTCCTGGAGAAGAGTCTACTATTCCTaGGAAGAGCGGCTTTTGTTCATCATCAATGGAGGA +
Preference number: 6 (lower is better)
Translates to: CFPYSWRRVYYS*EERLLFIINGG
Trigger: TCCTCCATTGATGATGAACAAAAGCCGCTCTTCTCAGGAATAGTAGACTCTTCTCCAGGAATAGGGAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS TCA 72 bp GCAAGAGTGACTTCTTTTATCTATGTGCATTCTTCCTaGGGTGGGCACTGTTTCTTCAAAATCGAGCCCAGA +
Preference number: 6 (lower is better)
Translates to: ARVTSFIYVHSS*GGHCFFKIEPR
Trigger: TCTGGGCTCGATTTTGAAGAAACAGTGCCCACCTCAGGAAGAATGCACATAGATAAAAGAAGTCACTCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS CCA 72 bp ACAGTGGTTTGTTTCTGCAGCAACTGTAAGATGGTCTaGATGTCAGTGGTCATTTGGGATTCAAGCCTGTTA +
Preference number: 6 (lower is better)
Translates to: TVVCFCSNCKMV*MSVVIWDSSLL
Trigger: TAACAGGCTTGAATCCCAAATGACCACTGACATCCAGACCATCTTACAGTTGCTGCAGAAACAAACCACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS CAA 72 bp TCAAGAGGTCCGGATATATTCACCAAGGGAGAACATTaGCTGGGCTGTATCAAAGCTTTTGTGTCATCTGCT +
Preference number: 6 (lower is better)
Translates to: SRGPDIFTKGEH*LGCIKAFVSSA
Trigger: AGCAGATGACACAAAAGCTTTGATACAGCCCAGCAAATGTTCTCCCTTGGTGAATATATCCGGACCTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000328032.8
ENST00000332142.10
ENST00000477019.1
ENST00000618399.4
ENST00000621889.1
CDS CAA 72 bp AGAGTGAGCTGTGGAATCTTGTTAATGGTGCTGTATTaGTTGAGGTTTGAATCTGATGTGGATCCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: RVSCGILLMVLY*LRFESDVDPRR
Trigger: CCTCCTGGGATCCACATCAGATTCAAACCTCAACAAATACAGCACCATTAACAAGATTCCACAGCTCACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328032.8
ENST00000332142.10
ENST00000477019.1
ENST00000618399.4
ENST00000621889.1
CDS CAA 72 bp CCCCGAAAGGCTTTGCAGTTTTGCAGCAATGTCTGGTaGAGATGTAGACAAATGTCTGCTTGTAAGCATTCT +
Preference number: 6 (lower is better)
Translates to: PRKALQFCSNVW*RCRQMSACKHS
Trigger: AGAATGCTTACAAGCAGACATTTGTCTACATCTCAACCAGACATTGCTGCAAAACTGCAAAGCCTTTCGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS CCA 72 bp TGCATGTGGTACCTGGCAGTTCCCGAGTATAGTCTTTaGATAATTGCAGATACATTCCCAAAAATGCTTGCA +
Preference number: 6 (lower is better)
Translates to: CMWYLAVPEYSL*IIADTFPKMLA
Trigger: TGCAAGCATTTTTGGGAATGTATCTGCAATTATCCAAAGACTATACTCGGGAACTGCCAGGTACCACATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328032.8
ENST00000332142.10
ENST00000618399.4
ENST00000621889.1
CDS CCA 72 bp AGTGACTTCTTTTATCTATGTGCATTCTTCCTGAGGTaGGCACTGTTTCTTCAAAATCGAGCCCAGATGCTT +
Preference number: 6 (lower is better)
Translates to: SDFFYLCAFFLR*ALFLQNRAQML
Trigger: AAGCATCTGGGCTCGATTTTGAAGAAACAGTGCCCACCTCAGGAAGAATGCACATAGATAAAAGAAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS CAA 90 bp GAAAAATTCAGAGTGAGCTGTGGAATCTTGTTAATGGTGCTGTATTaGTTGAGGTTTGAATCTGATGTGGATCCCAGGAGGCTTGACTTG +
Preference number: 6 (lower is better)
Translates to: EKFRVSCGILLMVLY*LRFESDVDPRRLDL
Trigger: CAAGTCAAGCCTCCTGGGATCCACATCAGATTCAAACCTCAACAAATACAGCACCATTAACAAGATTCCACAGCTCACTCTGAATTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000328032.8
ENST00000332142.10
ENST00000477019.1
ENST00000618399.4
ENST00000621889.1
CDS TCA 72 bp GGATACATATCCAAAACCTCTAACAAGTCTTCTCGCTaGATCTTATGCAAGTCACAGTATGTGAGGGCTCTT +
Preference number: 6 (lower is better)
Translates to: GYISKTSNKSSR*ILCKSQYVRAL
Trigger: AAGAGCCCTCACATACTGTGACTTGCATAAGATTCAGCGAGAAGACTTGTTAGAGGTTTTGGATATGTATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS GCA 72 bp AGTGAAGTCAAGTTGTCTTCTGAAGCTGTGTTCAGATaGACCCCACTTGAAAGGGATTCTTTGGATTTAAGT +
Preference number: 6 (lower is better)
Translates to: SEVKLSSEAVFR*TPLERDSLDLS
Trigger: ACTTAAATCCAAAGAATCCCTTTCAAGTGGGGTGCATCTGAACACAGCTTCAGAAGACAACTTGACTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS CAA 72 bp AATATCGTAAACTTGTTGATGCGTGGTGTCTGCAGTTaGTATTCAGGTAGGACATCTGCTCCTAAAGAGAGA +
Preference number: 6 (lower is better)
Translates to: NIVNLLMRGVCS*YSGRTSAPKER
Trigger: TCTCTCTTTAGGAGCAGATGTCCTACCTGAATACAAACTGCAGACACCACGCATCAACAAGTTTACGATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328032.8
ENST00000332142.10
ENST00000618399.4
ENST00000621889.1
CDS TCA 72 bp TGTGACGTATTTGTCTTTAATGGATGGTCCAGAACTTaGGTCACTGTCATTGTAACGTTTCCCAATTTGCTG +
Preference number: 6 (lower is better)
Translates to: CDVFVFNGWSRT*VTVIVTFPNLL
Trigger: CAGCAAATTGGGAAACGTTACAATGACAGTGACTCAAGTTCTGGACCATCCATTAAAGACAAATACGTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328032.8
ENST00000332142.10
ENST00000618399.4
ENST00000621889.1
CDS CAA 72 bp ATTTCCCTTCTTGGGCATCAGAATGACCTGAAGTGTTaGTTAAAACACAGCTTGGTGAATTTCTGTGTTTCC +
Preference number: 6 (lower is better)
Translates to: ISLLGHQNDLKC*LKHSLVNFCVS
Trigger: GGAAACACAGAAATTCACCAAGCTGTGTTTTAACAAACACTTCAGGTCATTCTGATGCCCAAGAAGGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477019.1
CDS CCA 72 bp CTTCAAAGTGTCTCTTGGAACTCTGATAATGTCTTATaGTATCTGCAGAGTCTTCAGGATCATTTGTACTGT +
Preference number: 6 (lower is better)
Translates to: LQSVSWNSDNVL*YLQSLQDHLYC
Trigger: ACAGTACAAATGATCCTGAAGACTCTGCAGATACCATAAGACATTATCAGAGTTCCAAGAGACACTTTGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS CCA 72 bp AAGGTGATGCTGATGGTCTCACACTTGAAGAACCATTaGCAGGCAATTATTTGCAAAATATTAGGTCTATAT +
Preference number: 6 (lower is better)
Translates to: KVMLMVSHLKNH*QAIICKILGLY
Trigger: ATATAGACCTAATATTTTGCAAATAATTGCCTGCCAATGGTTCTTCAAGTGTGAGACCATCAGCATCACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477019.1
CDS CAA 72 bp TTTGGCTATCACTATAATGCCTGCGGCACTTTCATTTaGGAAAACAGACATACATACCATGTTCATGTCAAT +
Preference number: 6 (lower is better)
Translates to: FGYHYNACGTFI*ENRHTYHVHVN
Trigger: ATTGACATGAACATGGTATGTATGTCTGTTTTCCAAAATGAAAGTGCCGCAGGCATTATAGTGATAGCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328032.8
ENST00000621889.1
CDS TCA 72 bp CTTAGGTTGAAAGTCAACTCTAGGTTTGTTAGAAAGTaGTCAGAAAACTCAGGATACATATCCAAAACCTCT +
Preference number: 6 (lower is better)
Translates to: LRLKVNSRFVRK*SENSGYISKTS
Trigger: AGAGGTTTTGGATATGTATCCTGAGTTTTCTGATCACTTTCTAACAAACCTAGAGTTGACTTTCAACCTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332142.10
ENST00000618399.4
CDS CAA 72 bp TTCAAAATTAATGATGAACATCATAGCCACGCCCTCTaGGTTTTTCACTGGAATTATGTGAGTGTTACAAAT +
Preference number: 6 (lower is better)
Translates to: FKINDEHHSHAL*VFHWNYVSVTN
Trigger: ATTTGTAACACTCACATAATTCCAGTGAAAAACCAAGAGGGCGTGGCTATGATGTTCATCATTAATTTTGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328032.8
ENST00000332142.10
ENST00000618399.4
ENST00000621889.1