RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNH5 (Homo sapiens)

Ensembl gene IDs: ENSG00000140015

Ensembl transcript IDs: ENST00000322893.12, ENST00000394964.3, ENST00000394968.2, ENST00000420622.6

Found 515 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGCAGCTCCTTCTGCTGCTTGAACTTCTGGAAGAGCTTTCTGACTaGGTGGTCCACGGGAATGCTGAGGGTCACCTCATTCTTCTGCCG +
Preference number: 1 (lower is better)
Translates to: PQLLLLLELLEELSD*VVHGNAEGHLILLP
Trigger: CGGCAGAAGAATGAGGTGACCCTCAGCATTCCCGTGGACCACCCAGTCAGAAAGCTCTTCCAGAAGTTCAAGCAGCAGAAGGAGCTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR CCA 90 bp AGCTCCTTCTGCTGCTTGAACTTCTGGAAGAGCTTTCTGACTGGGTaGTCCACGGGAATGCTGAGGGTCACCTCATTCTTCTGCCGGAGG +
Preference number: 1 (lower is better)
Translates to: SSFCCLNFWKSFLTG*STGMLRVTSFFCRR
Trigger: CCTCCGGCAGAAGAATGAGGTGACCCTCAGCATTCCCGTGGACCACCCAGTCAGAAAGCTCTTCCAGAAGTTCAAGCAGCAGAAGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR TCA 90 bp TCTACCTGGAGTTGGTTCCTCTCAGGGTCACCCTGTGTTGAGCCCTaGTTCCGCAGCTCCTTCTGCTGCTTGAACTTCTGGAAGAGCTTT +
Preference number: 1 (lower is better)
Translates to: STWSWFLSGSPCVEP*FRSSFCCLNFWKSF
Trigger: AAAGCTCTTCCAGAAGTTCAAGCAGCAGAAGGAGCTGCGGAATCAGGGCTCAACACAGGGTGACCCTGAGAGGAACCAACTCCAGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR TCA 90 bp ACTGGTTTTCACATAGGCCAGAGACGTCTGAATGGGAGTAATCTGTaGCACAGTCACCACGCTGGTTCCGGTGATGGAGGCTCCATTCTG +
Preference number: 1 (lower is better)
Translates to: TGFHIGQRRLNGSNL*HSHHAGSGDGGSIL
Trigger: CAGAATGGAGCCTCCATCACCGGAACCAGCGTGGTGACTGTGTCACAGATTACTCCCATTCAGACGTCTCTGGCCTATGTGAAAACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR CCA 90 bp TCCTCCCATCAAAATGCAGCCCAACCAGCCAAGTGCTTAGGGGATTaGGTTTGTAGGTCAGAACCAGAGGTTCTAAACTCATTGGTTGGT +
Preference number: 1 (lower is better)
Translates to: SSHQNAAQPAKCLGD*VCRSEPEVLNSLVG
Trigger: ACCAACCAATGAGTTTAGAACCTCTGGTTCTGACCTACAAACCCAATCCCCTAAGCACTTGGCTGGTTGGGCTGCATTTTGATGGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CCA 90 bp TTTCCATTCTTCATTCTTATTGGGCTGTTGACTTTGAGACATTTTTaGTCAGCACCGCCGTTGGGCTTGAGTTCCATGGCATCACGGTTG +
Preference number: 1 (lower is better)
Translates to: FPFFILIGLLTLRHF*SAPPLGLSSMASRL
Trigger: CAACCGTGATGCCATGGAACTCAAGCCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGTCAACAGCCCAATAAGAATGAAGAATGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR TCA 90 bp GTAACTTTTATACTTTCTCCTGGACTCCGTGAAAACTCGGATAGATaGATGGGTGAAGTAGGAAGTCGTGCAGCAGTTTCACACCCAGCA +
Preference number: 1 (lower is better)
Translates to: VTFILSPGLRENSDR*MGEVGSRAAVSHPA
Trigger: TGCTGGGTGTGAAACTGCTGCACGACTTCCTACTTCACCCATTCATCTATCCGAGTTTTCACGGAGTCCAGGAGAAAGTATAAAAGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394968.2
3UTR TCA 90 bp GTGGAATCTGGGAACCTAAAAGACTACTCTATATACAATGTTTGCTaGAAACATGCATTCCTGCTGAAAACAGCAGGGTGCATTCAGCAC +
Preference number: 1 (lower is better)
Translates to: VESGNLKDYSIYNVC*KHAFLLKTAGCIQH
Trigger: GTGCTGAATGCACCCTGCTGTTTTCAGCAGGAATGCATGTTTTCAGCAAACATTGTATATAGAGTAGTCTTTTAGGTTCCCAGATTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR TCA 90 bp GCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAATaGGAGAGAGTGATCAGATCTTTTTGTTTCCTCCCATCAAAATGC +
Preference number: 1 (lower is better)
Translates to: ALTALVIQQSVIPHE*ERVIRSFCFLPSKC
Trigger: GCATTTTGATGGGAGGAAACAAAAAGATCTGATCACTCTCTCTCATTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR GCA 90 bp GAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTaGCTGAACCATTTTCAGTACCATTCATATAGCTTTGGTATTGTC +
Preference number: 1 (lower is better)
Translates to: EAWACIQPRHSIQPL*LNHFQYHSYSFGIV
Trigger: GACAATACCAAAGCTATATGAATGGTACTGAAAATGGTTCAGGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CCA 90 bp CCTGTGTTAGAAACTCAACTTTACCATGTAACAAGTATGCCATCCTaGACAAGTTCCTTAACCTATACCTTCATGGGGTTGCTGCAAGAA +
Preference number: 1 (lower is better)
Translates to: PVLETQLYHVTSMPS*TSSLTYTFMGLLQE
Trigger: TTCTTGCAGCAACCCCATGAAGGTATAGGTTAAGGAACTTGTCCAGGATGGCATACTTGTTACATGGTAAAGTTGAGTTTCTAACACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR TCA 90 bp CATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCTaGACCATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCT +
Preference number: 1 (lower is better)
Translates to: HGPVFNHVIQFNHCA*TIFSTIHIALVLSS
Trigger: AGATGACAATACCAAAGCTATATGAATGGTACTGAAAATGGTTCAGGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR TCA 90 bp TTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATaGATGAGAGAGAGTGATCAGATCTTTTTGTTTCCTCCCATCAAA +
Preference number: 1 (lower is better)
Translates to: FGFDCFGHSTVSDSA*MRESDQIFLFPPIK
Trigger: TTTGATGGGAGGAAACAAAAAGATCTGATCACTCTCTCTCATTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR GCA 90 bp AAGACTAAAATTCAGTCTTTAGTATCCCCCTTTCACAAATGGACCTaGCTGAGCCACAATAGCTTATTGAATCAACTCAGCAGAAGTCCA +
Preference number: 1 (lower is better)
Translates to: KTKIQSLVSPFHKWT*LSHNSLLNQLSRSP
Trigger: TGGACTTCTGCTGAGTTGATTCAATAAGCTATTGTGGCTCAGGCAGGTCCATTTGTGAAAGGGGGATACTAAAGACTGAATTTTAGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR GCA 90 bp AGAGTAAAGAAGCAGATAGATTCTAATCAGTCTTTTCTCAACCCTTaGCTTCATCATCTTTCTAGTTCCCAGTCCAAATCCTCAGTGGTC +
Preference number: 1 (lower is better)
Translates to: RVKKQIDSNQSFLNP*LHHLSSSQSKSSVV
Trigger: GACCACTGAGGATTTGGACTGGGAACTAGAAAGATGATGAAGGCAAGGGTTGAGAAAAGACTGATTAGAATCTATCTGCTTCTTTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR GCA 90 bp ATTCTGGATGCACCAAGAGCATCTATACAGTGTAGGAATAAAACATaGAGTTATCTGGTCCTCAAAAGAGCATCTACTGTCTATGTGCTA +
Preference number: 1 (lower is better)
Translates to: ILDAPRASIQCRNKT*SYLVLKRASTVYVL
Trigger: TAGCACATAGACAGTAGATGCTCTTTTGAGGACCAGATAACTGCATGTTTTATTCCTACACTGTATAGATGCTCTTGGTGCATCCAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR TCA 90 bp AGCCTGAGATCAAATTTGTCATGGCAACATTGGCAGGTTGGACCCTaGTTCTTCAAATATTACATTGCCTTGGGTAACAAAAATCATACT +
Preference number: 1 (lower is better)
Translates to: SLRSNLSWQHWQVGP*FFKYYIALGNKNHT
Trigger: AGTATGATTTTTGTTACCCAAGGCAATGTAATATTTGAAGAATCAGGGTCCAACCTGCCAATGTTGCCATGACAAATTTGATCTCAGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR TCA 90 bp CACAAAACCCATAGCAATAAGTTTTCAATATCCCACACTCTTATCTaGCTTAGGCAACTAAACAGTCATTTAAATGGAGCAAACACTGCC +
Preference number: 1 (lower is better)
Translates to: HKTHSNKFSISHTLI*LRQLNSHLNGANTA
Trigger: GGCAGTGTTTGCTCCATTTAAATGACTGTTTAGTTGCCTAAGTCAGATAAGAGTGTGGGATATTGAAAACTTATTGCTATGGGTTTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR GCA 90 bp CATGCACACAGAGAACAGAGATGGCTGAAAAGACACTATGATAACTaGACCATAATTAAACAATTGATACTTTCCCTCCTTCCTAACAAT +
Preference number: 1 (lower is better)
Translates to: HAHREQRWLKRHYDN*TIIKQLILSLLPNN
Trigger: ATTGTTAGGAAGGAGGGAAAGTATCAATTGTTTAATTATGGTGCAGTTATCATAGTGTCTTTTCAGCCATCTCTGTTCTCTGTGTGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CCA 90 bp TCTATGTTTTTAATCATCATCTTCTTTGGCAGGCCAGAATCCAGCTaGACATGCAATATTTACATATCAAAATCCATGTGTGGTCATCAT +
Preference number: 1 (lower is better)
Translates to: SMFLIIIFFGRPESS*TCNIYISKSMCGHH
Trigger: ATGATGACCACACATGGATTTTGATATGTAAATATTGCATGTCCAGCTGGATTCTGGCCTGCCAAAGAAGATGATGATTAAAAACATAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CCA 90 bp AAGTCTGAATGTGATAACATGTCTTTCAGTTCTAGTGGCTTTGGTTaGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATAATA +
Preference number: 1 (lower is better)
Translates to: KSECDNMSFSSSGFG*EYWEIEKLIQMGII
Trigger: TATTATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACTAGAACTGAAAGACATGTTATCACATTCAGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR TCA 90 bp TGGTCACACTGTTCTCTGAATCACTGCTCTTGGGGTCCTCAGACAATAGCCCCAAGGGTCACCCTGTGTTaGGCCCTGATTCCGCAGCTC +
Preference number: 2 (lower is better)
Translates to: WSHCSLNHCSWGPQTIAPRVTLC*ALIPQL
Trigger: GAGCTGCGGAATCAGGGCTCAACACAGGGTGACCCT...TGGGGCTATTGTCTGAGGACCCCAAGAGCAGTGATTCAGAGAACAGTGTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR-3UTR TCA 90 bp CCGTTGGGCTTGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGGGATTCACTGGGTCCACGGGAATGCTaGGGGTCACCTCATTCTTCT +
Preference number: 2 (lower is better)
Translates to: PLGLSSMASRLFCLRDSLGPREC*GSPHSS
Trigger: AGAAGAATGAGGTGACCCTCAGCATTCCCGTGGACC...CAGTGAATCCCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCCCAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR-3UTR GCA 90 bp GGCTTGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGGGATTCACTGGTTTTCGTCACCTCATTCTTCTaGCGGAGGCGCTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: GLSSMASRLFCLRDSLVFVTSFF*RRRSSS
Trigger: GGAGGAGGAGCGCCTCCGGCAGAAGAATGAGGTGAC...GAAAACCAGTGAATCCCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR-3UTR CCA 90 bp TTGGGCTTGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGGGATTCACTGGTTGAGCGGCTCTCTACCTaGAGTTGGTTCCTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: LGLSSMASRLFCLRDSLVERLST*SWFLSG
Trigger: CCCTGAGAGGAACCAACTCCAGGTAGAGAGCCGCTC...AACCAGTGAATCCCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR CAA 90 bp GGGCTGTTGACTTTGAGACATTTTTGGTCAGCACCGCCGTTGGGCTaGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGGGATTCACTG +
Preference number: 2 (lower is better)
Translates to: GLLTLRHFWSAPPLG*SSMASRLFCLRDSL
Trigger: CAGTGAATCCCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGTCAACAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR-3UTR CCA 90 bp TTTTTCTCCTCATGGGCTCCCATATTATTCTTGAGTCGCAGCCACCCTTTTCCAAGCTTTCTGACTGGGTaGTCCACGGGAATGCTGAGG +
Preference number: 2 (lower is better)
Translates to: FFSSWAPILFLSRSHPFPSFLTG*STGMLR
Trigger: CCTCAGCATTCCCGTGGACCACCCAGTCAGAAAGCT...TGGAAAAGGGTGGCTGCGACTCAAGAATAATATGGGAGCCCATGAGGAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR-3UTR CCA 90 bp GAATCACTGCTCTTGGGGTCCTCAGACAATAGCCCCATTGACTCAGCTTTAGTGACTTTGAGACATTTTTaGTCAGCACCGCCGTTGGGC +
Preference number: 2 (lower is better)
Translates to: ESLLLGSSDNSPIDSALVTLRHF*SAPPLG
Trigger: GCCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGT...CACTAAAGCTGAGTCAATGGGGCTATTGTCTGAGGACCCCAAGAGCAGTGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR CAA 90 bp CTTATTGGGCTGTTGACTTTGAGACATTTTTGGTCAGCACCGCCGTaGGGCTTGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGGGAT +
Preference number: 2 (lower is better)
Translates to: LIGLLTLRHFWSAPP*GLSSMASRLFCLRD
Trigger: ATCCCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGTCAACAGCCCAATAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR-3UTR TCA 90 bp GCTCCCATATTATTCTTGAGTCGCAGCCACCCTTTTCCATTTCCATTCTTCATTCCACGCTGGTTCCGGTaGTGGAGGCTCCATTCTGTA +
Preference number: 2 (lower is better)
Translates to: APILFLSRSHPFPFPFFIPRWFR*WRLHSV
Trigger: TACAGAATGGAGCCTCCATCACCGGAACCAGCGTGG...AATGAAGAATGGAAATGGAAAAGGGTGGCTGCGACTCAAGAATAATATGGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR-3UTR TCA 90 bp AGCTGGATGTCCTCTTTGAGTTCGTGTTTGACTTCCTGCAGTGTGGTCTGTAAGAATGGGAGTAATCTGTaGCACAGTCACCACGCTGGT +
Preference number: 2 (lower is better)
Translates to: SWMSSLSSCLTSCSVVCKNGSNL*HSHHAG
Trigger: ACCAGCGTGGTGACTGTGTCACAGATTACTCCCATT...CTTACAGACCACACTGCAGGAAGTCAAACACGAACTCAAAGAGGACATCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR-3UTR GCA 90 bp CTTCGGGCCTCCCCAGCCTTATCCAAACGAAGGTCACTTTTTGTAATTCCACTGGCATCACGGTTGTTCTaGTTAAGGGATTCACTGGTT +
Preference number: 2 (lower is better)
Translates to: LRASPALSKRRSLFVIPLASRLF*LRDSLV
Trigger: AACCAGTGAATCCCTTAAGCAGAACAACCGTGATGC...CAGTGGAATTACAAAAAGTGACCTTCGTTTGGATAAGGCTGGGGAGGCCCGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR-3UTR CCA 90 bp TTGGGCTTGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGGGATTCACTGGTTTGCTGCTTGAACTTCTaGAAGAGCTTTCTGACTGGG +
Preference number: 2 (lower is better)
Translates to: LGLSSMASRLFCLRDSLVCCLNF*KSFLTG
Trigger: CCCAGTCAGAAAGCTCTTCCAGAAGTTCAAGCAGCA...AACCAGTGAATCCCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR-3UTR TCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCATGCTGTGCATGCACTaGCTGAAAAGTATGCTTCCC +
Preference number: 2 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCAMLCMH*LKSMLP
Trigger: GGGAAGCATACTTTTCAGTCAGTGCATGCACAGCAT...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CAA 90 bp GTATCCCCCTTTCACAAATGGACCTGCCTGAGCCACAATAGCTTATaGAATCAACTCAGCAGAAGTCCAGCAGTAGAACTGTGTGCAAAA +
Preference number: 2 (lower is better)
Translates to: VSPFHKWTCLSHNSL*NQLSRSPAVELCAK
Trigger: TTTTGCACACAGTTCTACTGCTGGACTTCTGCTGAGTTGATTCAATAAGCTATTGTGGCTCAGGCAGGTCCATTTGTGAAAGGGGGATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CAA 90 bp ATTTCCATTCTTCATTCTTATTGGGCTGTTGACTTTGAGACATTTTaGGTCAGCACCGCCGTTGGGCTTGAGTTCCATGGCATCACGGTT +
Preference number: 2 (lower is better)
Translates to: ISILHSYWAVDFETF*VSTAVGLEFHGITV
Trigger: AACCGTGATGCCATGGAACTCAAGCCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGTCAACAGCCCAATAAGAATGAAGAATGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR-3UTR CCA 90 bp CAACTTCATGCAAACACTAACTCCCCTGCTCCCCATATTAAATGCTGTGCATGCAATCATCATCTTCTTTaGCAGGCCAGAATCCAGCTG +
Preference number: 2 (lower is better)
Translates to: QLHANTNSPAPHIKCCACNHHLL*QARIQL
Trigger: CAGCTGGATTCTGGCCTGCCAAAGAAGATGATGATT...GCATGCACAGCATTTAATATGGGGAGCAGGGGAGTTAGTGTTTGCATGAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CAA 90 bp TTAGGGGATTGGGTTTGTAGGTCAGAACCAGAGGTTCTAAACTCATaGGTTGGTGGGAGAACACTTATTTCTAAAGAAGGCCCCAGCATT +
Preference number: 2 (lower is better)
Translates to: LGDWVCRSEPEVLNS*VGGRTLISKEGPSI
Trigger: AATGCTGGGGCCTTCTTTAGAAATAAGTGTTCTCCCACCAACCAATGAGTTTAGAACCTCTGGTTCTGACCTACAAACCCAATCCCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR TCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCAGAAAAGCAGTTATCTaGGTCGAGCAACTTAATGTC +
Preference number: 2 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCARKAVI*VEQLNV
Trigger: GACATTAAGTTGCTCGACTCAGATAACTGCTTTTCT...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CAA 90 bp CTCGATATACATACTCAGCCTGAGATCAAATTTGTCATGGCAACATaGGCAGGTTGGACCCTGATTCTTCAAATATTACATTGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: LDIHTQPEIKFVMAT*AGWTLILQILHCLG
Trigger: CCCAAGGCAATGTAATATTTGAAGAATCAGGGTCCAACCTGCCAATGTTGCCATGACAAATTTGATCTCAGGCTGAGTATGTATATCGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR TCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTGGAGACGTGTTCCCCTaGAAACTTCCATTATGGTTA +
Preference number: 2 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFGDVFP*KLPLWL
Trigger: TAACCATAATGGAAGTTTTCAGGGGAACACGTCTCC...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR TCA 90 bp GATATCAAATGGACCAGATATCACAGGGTGAACAAAATCTCCTTAAACAGAAGGAACATGCATTCCTGCTaGAAACAGCAGGGTGCATTC +
Preference number: 2 (lower is better)
Translates to: DIKWTRYHRVNKISLNRRNMHSC*KQQGAF
Trigger: GAATGCACCCTGCTGTTTTCAGCAGGAATGCATGTT...CCTTCTGTTTAAGGAGATTTTGTTCACCCTGTGATATCTGGTCCATTTGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCAAGATTTGTGGAATCTaGGAACCTAAAAGACTACTC +
Preference number: 2 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCAKICGI*EPKRLL
Trigger: GAGTAGTCTTTTAGGTTCCCAGATTCCACAAATCTT...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR TCA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCTCCCACACTCTTATCTaGCTTAGGCAACTAAACAGT +
Preference number: 2 (lower is better)
Translates to: TFAILLQPPVEDTASDLTSHTLI*LRQLNS
Trigger: ACTGTTTAGTTGCCTAAGTCAGATAAGAGTGTGGGA...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR TCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTTGTAGGTCGATTAGGTaGAACTCTACGTCAATGTCA +
Preference number: 2 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFCRSIR*NSTSMS
Trigger: TGACATTGACGTAGAGTTTCACCTAATCGACCTACA...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR TCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTCAGTTATTAGCCAAGTaGAAACAAGATGGTTTGGGC +
Preference number: 2 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFQLLAK*KQDGLG
Trigger: GCCCAAACCATCTTGTTTTCACTTGGCTAATAACTG...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CCA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCGCAACATTGGCAGGTTaGACCCTGATTCTTCAAATA +
Preference number: 2 (lower is better)
Translates to: TFAILLQPPVEDTASDLTATLAG*TLILQI
Trigger: TATTTGAAGAATCAGGGTCCAACCTGCCAATGTTGC...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTATAAAAAGCTTTGGATaGTGTCAGTGGGGTCCTTCA +
Preference number: 2 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFIKSFG*CQWGPS
Trigger: TGAAGGACCCCACTGACACCATCCAAAGCTTTTTAT...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR TCA 90 bp GATATCAAATGGACCAGATATCACAGGGTGAACAAAATCTCCTTAAACAGAAGGGCCACAATAGCTTATTaGATCAACTCAGCAGAAGTC +
Preference number: 2 (lower is better)
Translates to: DIKWTRYHRVNKISLNRRATIAY*INSAEV
Trigger: GACTTCTGCTGAGTTGATTCAATAAGCTATTGTGGC...CCTTCTGTTTAAGGAGATTTTGTTCACCCTGTGATATCTGGTCCATTTGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR TCA 90 bp AAATTGAGGCATAAAGAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGTGTGAAAACTCGGATAGATaGATGGGTGAAGTAGGAAGT +
Preference number: 2 (lower is better)
Translates to: KLRHKEFKWFPLGHTTVCENSDR*MGEVGS
Trigger: ACTTCCTACTTCACCCATTCATCTATCCGAGTTTTC...ACACACAGTTGTGTGACCTAAGGGAAACCACTTAAACTCTTTATGCCTCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
3UTR-3UTR GCA 90 bp GATATCAAATGGACCAGATATCACAGGGTGAACAAAATCTCCTTAAACAGAAGGTTTCACAAATGGACCTaGCTGAGCCACAATAGCTTA +
Preference number: 2 (lower is better)
Translates to: DIKWTRYHRVNKISLNRRFHKWT*LSHNSL
Trigger: TAAGCTATTGTGGCTCAGGCAGGTCCATTTGTGAAA...CCTTCTGTTTAAGGAGATTTTGTTCACCCTGTGATATCTGGTCCATTTGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR GCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTACAAATATCTGCCACTaGACACTTCAAAACAGTCAC +
Preference number: 2 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFTNICH*TLQNSH
Trigger: GTGACTGTTTTGAAGTGTGCAGTGGCAGATATTTGT...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CCA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATAAGATCAAATTTGTCATaGCAACATTGGCAGGTTGGA +
Preference number: 2 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGIRSNLS*QHWQVG
Trigger: TCCAACCTGCCAATGTTGCCATGACAAATTTGATCT...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTTGTCAGCTTACAAGATaGCAGCTGTTCTCCAAGAAG +
Preference number: 2 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPCQLTR*QLFSKK
Trigger: CTTCTTGGAGAACAGCTGCCATCTTGTAAGCTGACA...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CCA 90 bp GATATCAAATGGACCAGATATCACAGGGTGAACAAAATCTCCTTAAACAGAAGGGGCCCTTATACCCTGTaGTGCAGTGTTTCTATAATA +
Preference number: 2 (lower is better)
Translates to: DIKWTRYHRVNKISLNRRGPYTL*CSVSII
Trigger: TATTATAGAAACACTGCACCACAGGGTATAAGGGCC...CCTTCTGTTTAAGGAGATTTTGTTCACCCTGTGATATCTGGTCCATTTGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CAA 90 bp ATTGGCGGGGAAATGGTACCATTTGGTACACTAGGAAAGGTTAACTaGCCCATAATTACACTTCTAGTTTGTGGTAAAGCTAAATTCAGA +
Preference number: 2 (lower is better)
Translates to: IGGEMVPFGTLGKVN*PIITLLVCGKAKFR
Trigger: TCTGAATTTAGCTTTACCACAAACTAGAAGTGTAATTATGGGCAAGTTAACCTTTCCTAGTGTACCAAATGGTACCATTTCCCCGCCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR TCA 90 bp GATATCAAATGGACCAGATATCACAGGGTGAACAAAATCTCCTTAAACAGAAGGGAGAACAGAGATGGCTaGAAAGACACTATGATAACT +
Preference number: 2 (lower is better)
Translates to: DIKWTRYHRVNKISLNRRENRDG*KDTMIT
Trigger: AGTTATCATAGTGTCTTTTCAGCCATCTCTGTTCTC...CCTTCTGTTTAAGGAGATTTTGTTCACCCTGTGATATCTGGTCCATTTGATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR GCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTCCTTATACCCTGTGGTaGAGTGTTTCTATAATAACA +
Preference number: 2 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFPYTLW*SVSIIT
Trigger: TGTTATTATAGAAACACTGCACCACAGGGTATAAGG...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CCA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCTTTGGTTGGGAATACTaGGAGATAGAAAAGCTCATA +
Preference number: 2 (lower is better)
Translates to: TFAILLQPPVEDTASDLTFGWEY*EIEKLI
Trigger: TATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAA...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTTCTAGTGGCTTTGGTTaGGAATACTGGGAGATAGAA +
Preference number: 2 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPSSGFG*EYWEIE
Trigger: TTCTATCTCCCAGTATTCCCAACCAAAGCCACTAGA...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CCA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCAAACATGCAGTTATCTaGTCCTCAAAAGAGCATCTA +
Preference number: 2 (lower is better)
Translates to: TFAILLQPPVEDTASDLTKHAVI*SSKEHL
Trigger: TAGATGCTCTTTTGAGGACCAGATAACTGCATGTTT...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR TCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTTATACATACTCAGCCTaGGATCAAATTTGTCATGGC +
Preference number: 2 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPYTYSA*DQICHG
Trigger: GCCATGACAAATTTGATCTCAGGCTGAGTATGTATA...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR TCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAACATCTTGTGGGCATGTaGAGTTCAATAGAAATTCTA +
Preference number: 2 (lower is better)
Translates to: NILALTALVIQQSVIPHEHLVGM*SSIEIL
Trigger: TAGAATTTCTATTGAACTTCACATGCCCACAAGATG...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR TCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAACCCTTCATTCAAATCTaGGTAAATTCAACTGCTAAG +
Preference number: 2 (lower is better)
Translates to: NILALTALVIQQSVIPHEPFIQI*VNSTAK
Trigger: CTTAGCAGTTGAATTTACTCAGATTTGAATGAAGGG...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR GCA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCGTGCATGCAGTCAACTaGATAATATACAAGCAATAT +
Preference number: 2 (lower is better)
Translates to: TFAILLQPPVEDTASDLTVHAVN*IIYKQY
Trigger: ATATTGCTTGTATATTATGCAGTTGACTGCATGCAC...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR GCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTTGTAGGAATAAAACATaGAGTTATCTGGTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFCRNKT*SYLVLK
Trigger: TTTGAGGACCAGATAACTGCATGTTTTATTCCTACA...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CCA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACAAGGCCAGAATCCAGCTaGACATGCAATATTTACATA +
Preference number: 2 (lower is better)
Translates to: SINVRGHEKDIILTMKATRPESS*TCNIYI
Trigger: TATGTAAATATTGCATGTCCAGCTGGATTCTGGCCT...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAAATAAAGAAAGGAAAATaGAGCCCATGGCTCATATGT +
Preference number: 2 (lower is better)
Translates to: NILALTALVIQQSVIPHEIKKGK*SPWLIC
Trigger: ACATATGAGCCATGGGCTCCATTTTCCTTTCTTTAT...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CCA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACATATTGTAGCATTACATaGAGACGTGTTCCCCTGAAA +
Preference number: 2 (lower is better)
Translates to: SINVRGHEKDIILTMKATYCSIT*RRVPLK
Trigger: TTTCAGGGGAACACGTCTCCATGTAATGCTACAATA...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTTGTTTTCTTATTTATTaGCGGGGAAATGGTACCATT +
Preference number: 2 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFCFLIY*RGNGTI
Trigger: AATGGTACCATTTCCCCGCCAATAAATAAGAAAACA...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CCA 90 bp GATATCAAATGGACCAGATATCACAGGGTGAACAAAATCTCCTTAAACAGAAGGAGAAATAAGTTCTCCTaGGTTCTTACAAGTGAATGT +
Preference number: 2 (lower is better)
Translates to: DIKWTRYHRVNKISLNRRRNKFS*VLTSEC
Trigger: ACATTCACTTGTAAGAACCCAGGAGAACTTATTTCT...CCTTCTGTTTAAGGAGATTTTGTTCACCCTGTGATATCTGGTCCATTTGATATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CAA 90 bp CATGGCAACATTGGCAGGTTGGACCCTGATTCTTCAAATATTACATaGCCTTGGGTAACAAAAATCATACTCTTTTATTATAGAATAGAG +
Preference number: 2 (lower is better)
Translates to: HGNIGRLDPDSSNIT*PWVTKIILFYYRIE
Trigger: CTCTATTCTATAATAAAAGAGTATGATTTTTGTTACCCAAGGCAATGTAATATTTGAAGAATCAGGGTCCAACCTGCCAATGTTGCCATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CAA 90 bp AAAGAAAATGTTGATACCAGTGACCATATATCAAACATACCACATTaGACAGTTTACTTTGGCCGATGTCTTTCAACTGTTAGGAGAAGT +
Preference number: 2 (lower is better)
Translates to: KENVDTSDHISNIPH*TVYFGRCLSTVRRS
Trigger: ACTTCTCCTAACAGTTGAAAGACATCGGCCAAAGTAAACTGTCAAATGTGGTATGTTTGATATATGGTCACTGGTATCAACATTTTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR TCA 72 bp CACATAGGCCAGAGACGTCTGAATGGGAGTAATCTGTaGCACAGTCACCACGCTGGTTCCGGTGATGGAGGC +
Preference number: 3 (lower is better)
Translates to: HIGQRRLNGSNL*HSHHAGSGDGG
Trigger: GCCTCCATCACCGGAACCAGCGTGGTGACTGTGTCACAGATTACTCCCATTCAGACGTCTCTGGCCTATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR CCA 72 bp ATGGAGGCTCCATTCTGTAAGGAGCGGCTCTCTACCTaGAGTTGGTTCCTCTCAGGGTCACCCTGTGTTGAG +
Preference number: 3 (lower is better)
Translates to: MEAPFCKERLST*SWFLSGSPCVE
Trigger: CTCAACACAGGGTGACCCTGAGAGGAACCAACTCCAGGTAGAGAGCCGCTCCTTACAGAATGGAGCCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR-3UTR CAA 90 bp TGCTTGGCATCAGCCTGGATGGGACTGTGCTCTAGCGGACTTCGGGCCTCCCCAATTGGGCTGTTGACTTaGAGACATTTTTGGTCAGCA +
Preference number: 3 (lower is better)
Translates to: CLASAWMGLCSSGLRASPIGLLT*RHFWSA
Trigger: TGCTGACCAAAAATGTCTCAAAGTCAACAGCCCAAT...TGGGGAGGCCCGAAGTCCGCTAGAGCACAGTCCCATCCAGGCTGATGCCAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR GCA 72 bp AGCTGGATGTCCTCTTTGAGTTCGTGTTTGACTTCCTaGAGTGTGGTCTGTAAGGCCTGCTCGGGGATGGGA +
Preference number: 3 (lower is better)
Translates to: SWMSSLSSCLTS*SVVCKACSGMG
Trigger: TCCCATCCCCGAGCAGGCCTTACAGACCACACTGCAGGAAGTCAAACACGAACTCAAAGAGGACATCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR CCA 72 bp TGCTGCTTGAACTTCTGGAAGAGCTTTCTGACTGGGTaGTCCACGGGAATGCTGAGGGTCACCTCATTCTTC +
Preference number: 3 (lower is better)
Translates to: CCLNFWKSFLTG*STGMLRVTSFF
Trigger: GAAGAATGAGGTGACCCTCAGCATTCCCGTGGACCACCCAGTCAGAAAGCTCTTCCAGAAGTTCAAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR-3UTR CAA 90 bp TTCTTAGTGGGTTTTTGGTCACACTGTTCTCTGAATCACTGCTCTTGGGGTCCTCAGGGTCACCCTGTGTaGAGCCCTGATTCCGCAGCT +
Preference number: 3 (lower is better)
Translates to: FLVGFWSHCSLNHCSWGPQGHPV*SPDSAA
Trigger: AGCTGCGGAATCAGGGCTCAACACAGGGTGACCCTG...AGGACCCCAAGAGCAGTGATTCAGAGAACAGTGTGACCAAAAACCCACTAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR-3UTR CAA 90 bp ACTTCGGGCCTCCCCAGCCTTATCCAAACGAAGGTCACTTTTTGTAATTCCACTGCTCTCTACCTGGAGTaGGTTCCTCTCAGGGTCACC +
Preference number: 3 (lower is better)
Translates to: TSGLPSLIQTKVTFCNSTALYLE*VPLRVT
Trigger: GGTGACCCTGAGAGGAACCAACTCCAGGTAGAGAGC...AGTGGAATTACAAAAAGTGACCTTCGTTTGGATAAGGCTGGGGAGGCCCGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR-3UTR CAA 90 bp CTTCGGGCCTCCCCAGCCTTATCCAAACGAAGGTCACTTTTTGTAATTCCACTGGACTTTGAGACATTTTaGGTCAGCACCGCCGTTGGG +
Preference number: 3 (lower is better)
Translates to: LRASPALSKRRSLFVIPLDFETF*VSTAVG
Trigger: CCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGTC...CAGTGGAATTACAAAAAGTGACCTTCGTTTGGATAAGGCTGGGGAGGCCCGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR GCA 72 bp GTTTCCTCCCATCAAAATGCAGCCCAACCAGCCAAGTaGTTAGGGGATTGGGTTTGTAGGTCAGAACCAGAG +
Preference number: 3 (lower is better)
Translates to: VSSHQNAAQPAK*LGDWVCRSEPE
Trigger: CTCTGGTTCTGACCTACAAACCCAATCCCCTAAGCACTTGGCTGGTTGGGCTGCATTTTGATGGGAGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CAA 90 bp CTTCGGGCCTCCCCAGCCTTATCCAAACGAAGGTCACTTTTTGTAATTCCACTGTCTGAATCACTGCTCTaGGGGTCCTCAGACAATAGC +
Preference number: 3 (lower is better)
Translates to: LRASPALSKRRSLFVIPLSESLL*GSSDNS
Trigger: GCTATTGTCTGAGGACCCCAAGAGCAGTGATTCAGA...CAGTGGAATTACAAAAAGTGACCTTCGTTTGGATAAGGCTGGGGAGGCCCGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR-3UTR CAA 90 bp GTCACACTGTTCTCTGAATCACTGCTCTTGGGGTCCTCAGACAATAGCCCCATTGCTCCCATATTATTCTaGAGTCGCAGCCACCCTTTT +
Preference number: 3 (lower is better)
Translates to: VTLFSESLLLGSSDNSPIAPILF*SRSHPF
Trigger: AAAAGGGTGGCTGCGACTCAAGAATAATATGGGAGC...AATGGGGCTATTGTCTGAGGACCCCAAGAGCAGTGATTCAGAGAACAGTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR CCA 72 bp CAAAATGCAGCCCAACCAGCCAAGTGCTTAGGGGATTaGGTTTGTAGGTCAGAACCAGAGGTTCTAAACTCA +
Preference number: 3 (lower is better)
Translates to: QNAAQPAKCLGD*VCRSEPEVLNS
Trigger: TGAGTTTAGAACCTCTGGTTCTGACCTACAAACCCAATCCCCTAAGCACTTGGCTGGTTGGGCTGCATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CCA 72 bp GGTTTTTGGTCACACTGTTCTCTGAATCACTGCTCTTaGGGTCCTCAGACAATAGCCCCATTGACTCAGCTT +
Preference number: 3 (lower is better)
Translates to: GFWSHCSLNHCS*GPQTIAPLTQL
Trigger: AAGCTGAGTCAATGGGGCTATTGTCTGAGGACCCCAAGAGCAGTGATTCAGAGAACAGTGTGACCAAAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR-3UTR CAA 90 bp TTCTTAGTGGGTTTTTGGTCACACTGTTCTCTGAATCACTGCTCTTGGGGTCCTAGCTCCTTCTGCTGCTaGAACTTCTGGAAGAGCTTT +
Preference number: 3 (lower is better)
Translates to: FLVGFWSHCSLNHCSWGPSSFCC*NFWKSF
Trigger: AAAGCTCTTCCAGAAGTTCAAGCAGCAGAAGGAGCT...AGGACCCCAAGAGCAGTGATTCAGAGAACAGTGTGACCAAAAACCCACTAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR CCA 72 bp TTCATTCTTATTGGGCTGTTGACTTTGAGACATTTTTaGTCAGCACCGCCGTTGGGCTTGAGTTCCATGGCA +
Preference number: 3 (lower is better)
Translates to: FILIGLLTLRHF*SAPPLGLSSMA
Trigger: TGCCATGGAACTCAAGCCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGTCAACAGCCCAATAAGAATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR TCA 72 bp ATACTTTCTCCTGGACTCCGTGAAAACTCGGATAGATaGATGGGTGAAGTAGGAAGTCGTGCAGCAGTTTCA +
Preference number: 3 (lower is better)
Translates to: ILSPGLRENSDR*MGEVGSRAAVS
Trigger: TGAAACTGCTGCACGACTTCCTACTTCACCCATTCATCTATCCGAGTTTTCACGGAGTCCAGGAGAAAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
3UTR TCA 72 bp CCCGCTATAATTTGGTTGAAAAAGTTGAGGAGCAAATaGGGGGTCCATGGCAACAATGGTTCTAGGAACAAC +
Preference number: 3 (lower is better)
Translates to: PAIIWLKKLRSK*GVHGNNGSRNN
Trigger: GTTGTTCCTAGAACCATTGTTGCCATGGACCCCTCATTTGCTCCTCAACTTTTTCAACCAAATTATAGCGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR TCA 72 bp CTTCCTTTTTCTCCTCATGGGCTCCCATATTATTCTTaGGTCGCAGCCACCCTTTTCCATTTCCATTCTTCA +
Preference number: 3 (lower is better)
Translates to: LPFSPHGLPYYS*VAATLFHFHSS
Trigger: TGAAGAATGGAAATGGAAAAGGGTGGCTGCGACTCAAGAATAATATGGGAGCCCATGAGGAGAAAAAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR-3UTR CAA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCGGCAACATTGGCAGGTaGGACCCTGATTCTTCAAAT +
Preference number: 3 (lower is better)
Translates to: TFAILLQPPVEDTASDLTGNIGR*DPDSSN
Trigger: ATTTGAAGAATCAGGGTCCAACCTGCCAATGTTGCC...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CAA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCAGCCACAATAGCTTATaGAATCAACTCAGCAGAAGT +
Preference number: 3 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCASHNSL*NQLSRS
Trigger: ACTTCTGCTGAGTTGATTCAATAAGCTATTGTGGCT...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR TCA 72 bp CCTGCTCCCCATATTAAATGCTGTGCATGCACTGACTaGAAAGTATGCTTCCCTGAACGACTTCCTAAAATA +
Preference number: 3 (lower is better)
Translates to: PAPHIKCCACTD*KVCFPERLPKI
Trigger: TATTTTAGGAAGTCGTTCAGGGAAGCATACTTTTCAGTCAGTGCATGCACAGCATTTAATATGGGGAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR TCA 72 bp GCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAATaGGAGAGAGTGATCAGATCTTTTTGTTTCCTCCCA +
Preference number: 3 (lower is better)
Translates to: ALVIQQSVIPHE*ERVIRSFCFLP
Trigger: TGGGAGGAAACAAAAAGATCTGATCACTCTCTCTCATTCATGCGGAATCACTGACTGTTGAATGACCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR GCA 72 bp ATTCAGTCTTTAGTATCCCCCTTTCACAAATGGACCTaGCTGAGCCACAATAGCTTATTGAATCAACTCAGC +
Preference number: 3 (lower is better)
Translates to: IQSLVSPFHKWT*LSHNSLLNQLS
Trigger: GCTGAGTTGATTCAATAAGCTATTGTGGCTCAGGCAGGTCCATTTGTGAAAGGGGGATACTAAAGACTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CCA 72 bp CCTGAGATCAAATTTGTCATGGCAACATTGGCAGGTTaGACCCTGATTCTTCAAATATTACATTGCCTTGGG +
Preference number: 3 (lower is better)
Translates to: PEIKFVMATLAG*TLILQILHCLG
Trigger: CCCAAGGCAATGTAATATTTGAAGAATCAGGGTCCAACCTGCCAATGTTGCCATGACAAATTTGATCTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR TCA 72 bp GGGAACCTAAAAGACTACTCTATATACAATGTTTGCTaGAAACATGCATTCCTGCTGAAAACAGCAGGGTGC +
Preference number: 3 (lower is better)
Translates to: GNLKDYSIYNVC*KHAFLLKTAGC
Trigger: GCACCCTGCTGTTTTCAGCAGGAATGCATGTTTTCAGCAAACATTGTATATAGAGTAGTCTTTTAGGTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR TCA 72 bp GACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATaGATGAGAGAGAGTGATCAGATCTTTTTGTTTCCT +
Preference number: 3 (lower is better)
Translates to: DCFGHSTVSDSA*MRESDQIFLFP
Trigger: AGGAAACAAAAAGATCTGATCACTCTCTCTCATTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CCA 72 bp GAAACTCAACTTTACCATGTAACAAGTATGCCATCCTaGACAAGTTCCTTAACCTATACCTTCATGGGGTTG +
Preference number: 3 (lower is better)
Translates to: ETQLYHVTSMPS*TSSLTYTFMGL
Trigger: CAACCCCATGAAGGTATAGGTTAAGGAACTTGTCCAGGATGGCATACTTGTTACATGGTAAAGTTGAGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CAA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTTCAGTTCTAGTGGCTTaGGTTGGGAATACTGGGAGA +
Preference number: 3 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPSVLVA*VGNTGR
Trigger: TCTCCCAGTATTCCCAACCAAAGCCACTAGAACTGA...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CAA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTAGCCTGAGATCAAATTaGTCATGGCAACATTGGCAG +
Preference number: 3 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPSLRSN*SWQHWQ
Trigger: CTGCCAATGTTGCCATGACAAATTTGATCTCAGGCT...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR TCA 72 bp AGTGAGAAAATGATAGCTCGATATACATACTCAGCCTaGGATCAAATTTGTCATGGCAACATTGGCAGGTTG +
Preference number: 3 (lower is better)
Translates to: SEKMIARYTYSA*DQICHGNIGRL
Trigger: CAACCTGCCAATGTTGCCATGACAAATTTGATCTCAGGCTGAGTATGTATATCGAGCTATCATTTTCTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR TCA 72 bp GGGAGAACACTTATTTCTAAAGAAGGCCCCAGCATTTaGCAAGCTTTCAAACTGCTTCCAAAGGTTTTTGTT +
Preference number: 3 (lower is better)
Translates to: GRTLISKEGPSI*QAFKLLPKVFV
Trigger: AACAAAAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAATAAGTGTTCTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR GCA 72 bp GCCTGTATTCAACCACGTCATTCAATTCAACCACTGTaGCTGAACCATTTTCAGTACCATTCATATAGCTTT +
Preference number: 3 (lower is better)
Translates to: ACIQPRHSIQPL*LNHFQYHSYSF
Trigger: AAAGCTATATGAATGGTACTGAAAATGGTTCAGGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CCA 72 bp CTTGTGTTTGTGGTAGGTAGATATTGTAGCATTACATaGAGACGTGTTCCCCTGAAAACTTCCATTATGGTT +
Preference number: 3 (lower is better)
Translates to: LVFVVGRYCSIT*RRVPLKTSIMV
Trigger: AACCATAATGGAAGTTTTCAGGGGAACACGTCTCCATGTAATGCTACAATATCTACCTACCACAAACACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CAA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAATTGGTTTACTCTTCTTaGACCAAGTGCCTTTACAAG +
Preference number: 3 (lower is better)
Translates to: NILALTALVIQQSVIPHELVYSS*TKCLYK
Trigger: CTTGTAAAGGCACTTGGTCAAAGAAGAGTAAACCAA...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CAA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAACATAAGCTGCACTTTTaGGTTTACTCTTCTTTGACC +
Preference number: 3 (lower is better)
Translates to: NILALTALVIQQSVIPHEHKLHF*VYSSLT
Trigger: GGTCAAAGAAGAGTAAACCAAAAAGTGCAGCTTATG...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR TCA 72 bp TCAAATTTGTCATGGCAACATTGGCAGGTTGGACCCTaGTTCTTCAAATATTACATTGCCTTGGGTAACAAA +
Preference number: 3 (lower is better)
Translates to: SNLSWQHWQVGP*FFKYYIALGNK
Trigger: TTTGTTACCCAAGGCAATGTAATATTTGAAGAATCAGGGTCCAACCTGCCAATGTTGCCATGACAAATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR TCA 72 bp GTAGATATTGTAGCATTACATGGAGACGTGTTCCCCTaGAAACTTCCATTATGGTTAATGGAAGTTATACGC +
Preference number: 3 (lower is better)
Translates to: VDIVALHGDVFP*KLPLWLMEVIR
Trigger: GCGTATAACTTCCATTAACCATAATGGAAGTTTTCAGGGGAACACGTCTCCATGTAATGCTACAATATCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR TCA 72 bp GTATTCAACCACGTCATTCAATTCAACCACTGTGCCTaGACCATTTTCAGTACCATTCATATAGCTTTGGTA +
Preference number: 3 (lower is better)
Translates to: VFNHVIQFNHCA*TIFSTIHIALV
Trigger: TACCAAAGCTATATGAATGGTACTGAAAATGGTTCAGGCACAGTGGTTGAATTGAATGACGTGGTTGAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CCA 72 bp ACTAAAATTCAGTCTTTAGTATCCCCCTTTCACAAATaGACCTGCCTGAGCCACAATAGCTTATTGAATCAA +
Preference number: 3 (lower is better)
Translates to: TKIQSLVSPFHK*TCLSHNSLLNQ
Trigger: TTGATTCAATAAGCTATTGTGGCTCAGGCAGGTCCATTTGTGAAAGGGGGATACTAAAGACTGAATTTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CCA 72 bp TGTGATAACATGTCTTTCAGTTCTAGTGGCTTTGGTTaGGAATACTGGGAGATAGAAAAGCTCATACAAATG +
Preference number: 3 (lower is better)
Translates to: CDNMSFSSSGFG*EYWEIEKLIQM
Trigger: CATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACTAGAACTGAAAGACATGTTATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CAA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAAGGTTGGTTGGTTTGTTaGTTTTACCACATTTCATGT +
Preference number: 3 (lower is better)
Translates to: NILALTALVIQQSVIPHEGWLVC*FYHISC
Trigger: ACATGAAATGTGGTAAAACAAACAAACCAACCAACC...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CAA 90 bp GATATCAAATGGACCAGATATCACAGGGTGAACAAAATCTCCTTAAACAGAAGGCTTAATGTCTACTTCTaGGTTGGTTGGTTTGTTTGT +
Preference number: 3 (lower is better)
Translates to: DIKWTRYHRVNKISLNRRLNVYF*VGWFVC
Trigger: ACAAACAAACCAACCAACCAAGAAGTAGACATTAAG...CCTTCTGTTTAAGGAGATTTTGTTCACCCTGTGATATCTGGTCCATTTGATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR-3UTR CAA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAACTAGGAAAGGTTAACTaGCCCATAATTACACTTCTA +
Preference number: 3 (lower is better)
Translates to: NILALTALVIQQSVIPHELGKVN*PIITLL
Trigger: TAGAAGTGTAATTATGGGCAAGTTAACCTTTCCTAG...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR GCA 72 bp AGAGAACAGAGATGGCTGAAAAGACACTATGATAACTaGACCATAATTAAACAATTGATACTTTCCCTCCTT +
Preference number: 3 (lower is better)
Translates to: REQRWLKRHYDN*TIIKQLILSLL
Trigger: AAGGAGGGAAAGTATCAATTGTTTAATTATGGTGCAGTTATCATAGTGTCTTTTCAGCCATCTCTGTTCTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp TGCTTGGCATCAGCCTGGATGGGACTGTGCTCTAGCGGACTTCGGGCCTCCCCATCCCCGGGAGCACAGTaGATGGTTTGGAACTCTACC +
Preference number: 4 (lower is better)
Translates to: CLASAWMGLCSSGLRASPSPGAQ*MVWNST
Trigger: GGTAGAGTTCCAAACCATTCACTGTGCTCCCGGGGA...TGGGGAGGCCCGAAGTCCGCTAGAGCACAGTCCCATCCAGGCTGATGCCAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp TGCTTGGCATCAGCCTGGATGGGACTGTGCTCTAGCGGACTTCGGGCCTCCCCAGACTTCCAAGGATCCTaGCACCACAAAGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: CLASAWMGLCSSGLRASPDFQGS*HHKAEG
Trigger: GCCCTCTGCTTTGTGGTGTCAGGATCCTTGGAAGTC...TGGGGAGGCCCGAAGTCCGCTAGAGCACAGTCCCATCCAGGCTGATGCCAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR GCA 90 bp TCTGACTGGGTGGTCCACGGGAATGCTGAGGGTCACCTCATTCTTCTGCCGGAGGTCACCTCATTCTTCTaGCGGAGGCGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SDWVVHGNAEGHLILLPEVTSFF*RRRSSS
Trigger: GGAGGAGGAGCGCCTCCGGCAGAAGAATGAGGTGAC...CTCCGGCAGAAGAATGAGGTGACCCTCAGCATTCCCGTGGACCACCCAGTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp TGCTTGGCATCAGCCTGGATGGGACTGTGCTCTAGCGGACTTCGGGCCTCCCCAAGAGGACACGTACAATaGATCCTTGCTGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: CLASAWMGLCSSGLRASPRGHVQ*ILAGSS
Trigger: GGAGGACCCAGCAAGGATTCATTGTACGTGTCCTCT...TGGGGAGGCCCGAAGTCCGCTAGAGCACAGTCCCATCCAGGCTGATGCCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp TGCTTGGCATCAGCCTGGATGGGACTGTGCTCTAGCGGACTTCGGGCCTCCCCACTGCAGCTGAGCAGCTaGATGTCCTCTTTGAGTTCG +
Preference number: 4 (lower is better)
Translates to: CLASAWMGLCSSGLRASPLQLSS*MSSLSS
Trigger: CGAACTCAAAGAGGACATCCAGCTGCTCAGCTGCAG...TGGGGAGGCCCGAAGTCCGCTAGAGCACAGTCCCATCCAGGCTGATGCCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp TCTGACTGGGTGGTCCACGGGAATGCTGAGGGTCACCTCATTCTTCTGCCGGAGGGTCCACGGGAATGCTaGGGGTCACCTCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: SDWVVHGNAEGHLILLPEGPREC*GSPHSS
Trigger: AGAAGAATGAGGTGACCCTCAGCATTCCCGTGGACC...CTCCGGCAGAAGAATGAGGTGACCCTCAGCATTCCCGTGGACCACCCAGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp TCTGACTGGGTGGTCCACGGGAATGCTGAGGGTCACCTCATTCTTCTGCCGGAGTGCTTGGCATCAGCCTaGATGGGACTGTGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SDWVVHGNAEGHLILLPECLASA*MGLCSS
Trigger: GCTAGAGCACAGTCCCATCCAGGCTGATGCCAAGCA...CTCCGGCAGAAGAATGAGGTGACCCTCAGCATTCCCGTGGACCACCCAGTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp TGCTTGGCATCAGCCTGGATGGGACTGTGCTCTAGCGGACTTCGGGCCTCCCCAATTCACTGGAGCGCCTaGCGATGTTCTCCAAAAATG +
Preference number: 4 (lower is better)
Translates to: CLASAWMGLCSSGLRASPIHWSA*RCSPKM
Trigger: CATTTTTGGAGAACATCGTCAGGCGCTCCAGTGAAT...TGGGGAGGCCCGAAGTCCGCTAGAGCACAGTCCCATCCAGGCTGATGCCAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp GTAATCTGTGACACAGTCACCACGCTGGTTCCGGTGATGGAGGCTCCATTCTGTCACCGCCGTTGGGCTTaGGTTCCATGGCATCACGGT +
Preference number: 4 (lower is better)
Translates to: VICDTVTTLVPVMEAPFCHRRWA*VPWHHG
Trigger: ACCGTGATGCCATGGAACTCAAGCCCAACGGCGGTG...ACAGAATGGAGCCTCCATCACCGGAACCAGCGTGGTGACTGTGTCACAGATTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp TCTGACTGGGTGGTCCACGGGAATGCTGAGGGTCACCTCATTCTTCTGCCGGAGCAGTCATTCTGCAGCTaGGCAGCTGGATGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SDWVVHGNAEGHLILLPEQSFCS*AAGCPL
Trigger: AAGAGGACATCCAGCTGCTCAGCTGCAGAATGACTG...CTCCGGCAGAAGAATGAGGTGACCCTCAGCATTCCCGTGGACCACCCAGTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR GCA 90 bp CTTCGGGCCTCCCCAGCCTTATCCAAACGAAGGTCACTTTTTGTAATTCCACTGGCCTGGATGGGACTGTaGTCTAGCGGACTTCGGGCC +
Preference number: 4 (lower is better)
Translates to: LRASPALSKRRSLFVIPLAWMGL*SSGLRA
Trigger: GGCCCGAAGTCCGCTAGAGCACAGTCCCATCCAGGC...CAGTGGAATTACAAAAAGTGACCTTCGTTTGGATAAGGCTGGGGAGGCCCGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp CTGCTTGAACTTCTGGAAGAGCTTTCTGACTGGGTGGTCCACGGGAATGCTGAGATGCAGGCCAGCCAGTaGGCCACCAGTCCAAACACA +
Preference number: 4 (lower is better)
Translates to: LLELLEELSDWVVHGNAEMQASQ*ATSPNT
Trigger: TGTGTTTGGACTGGTGGCCCACTGGCTGGCCTGCAT...CTCAGCATTCCCGTGGACCACCCAGTCAGAAAGCTCTTCCAGAAGTTCAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp TCCACGGGAATGCTGAGGGTCACCTCATTCTTCTGCCGGAGGCGCTCCTCCTCCGCTTCTTGTTTATACTaGGGAAGGATATCTGATCCC +
Preference number: 4 (lower is better)
Translates to: STGMLRVTSFFCRRRSSSASCLY*GRISDP
Trigger: GGGATCAGATATCCTTCCTCAGTATAAACAAGAAGC...GGAGGAGGAGCGCCTCCGGCAGAAGAATGAGGTGACCCTCAGCATTCCCGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATAGGCGACGGGGTCCCCTaGCTGTGTCTCCAGCCCGAC +
Preference number: 4 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGIGDGVP*LCLQPD
Trigger: GTCGGGCTGGAGACACAGTCAGGGGACCCCGTCGCC...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp TGCTTGGCATCAGCCTGGATGGGACTGTGCTCTAGCGGACTTCGGGCCTCCCCACCCACGAAAGTCGTGTaGAAATTTAAAACGATGTCA +
Preference number: 4 (lower is better)
Translates to: CLASAWMGLCSSGLRASPPTKVV*KFKTMS
Trigger: TGACATCGTTTTAAATTTTCACACGACTTTCGTGGG...TGGGGAGGCCCGAAGTCCGCTAGAGCACAGTCCCATCCAGGCTGATGCCAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp ACTTCGGGCCTCCCCAGCCTTATCCAAACGAAGGTCACTTTTTGTAATTCCACTAGGGTCACCCTGTGTTaGGCCCTGATTCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TSGLPSLIQTKVTFCNSTRVTLC*ALIPQL
Trigger: GAGCTGCGGAATCAGGGCTCAACACAGGGTGACCCT...AGTGGAATTACAAAAAGTGACCTTCGTTTGGATAAGGCTGGGGAGGCCCGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR GCA 90 bp GGTCACACAACTGTGTGTCCAGGATGCAAATCCAAGGGGTCAGATTCCAAACAGGTCACAGTACGTCAGTaGCCGGACGTTCGCACATGC +
Preference number: 4 (lower is better)
Translates to: GHTTVCPGCKSKGSDSKQVTVRQ*PDVRTC
Trigger: GCATGTGCGAACGTCCGGGCACTGACGTACTGTGAC...CTGTTTGGAATCTGACCCCTTGGATTTGCATCCTGGACACACAGTTGTGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR GCA 90 bp TCTGACTGGGTGGTCCACGGGAATGCTGAGGGTCACCTCATTCTTCTGCCGGAGGCATCACGGTTGTTCTaGTTAAGGGATTCACTGGTT +
Preference number: 4 (lower is better)
Translates to: SDWVVHGNAEGHLILLPEASRLF*LRDSLV
Trigger: AACCAGTGAATCCCTTAAGCAGAACAACCGTGATGC...CTCCGGCAGAAGAATGAGGTGACCCTCAGCATTCCCGTGGACCACCCAGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR GCA 90 bp AATGCTGAGGGTCACCTCATTCTTCTGCCGGAGGCGCTCCTCCTCCTCTTTCTTTCGTGTTTGACTTCCTaGAGTGTGGTCTGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: NAEGHLILLPEALLLLFLSCLTS*SVVCKA
Trigger: GGCCTTACAGACCACACTGCAGGAAGTCAAACACGA...AAGAAAGAGGAGGAGGAGCGCCTCCGGCAGAAGAATGAGGTGACCCTCAGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp CCGTTGGGCTTGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGGGATTCACTGAGCTTTCTGACTGGGTaGTCCACGGGAATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PLGLSSMASRLFCLRDSLSFLTG*STGMLR
Trigger: CCTCAGCATTCCCGTGGACCACCCAGTCAGAAAGCT...CAGTGAATCCCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCCCAACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp AATCCAAGGGGTCAGATTCCAAACAGTCTTAACCATTCCACTCTCCTGCTCCTCCTCCAGCATGGTAAATaGGGTCCCCGGGAGCACAGT +
Preference number: 4 (lower is better)
Translates to: NPRGQIPNSLNHSTLLLLLQHGK*GPREHS
Trigger: ACTGTGCTCCCGGGGACCTCATTTACCATGCTGGAG...GAGGAGCAGGAGAGTGGAATGGTTAAGACTGTTTGGAATCTGACCCCTTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR TCA 90 bp TTTCTCCTCATGGGCTCCCATATTATTCTTGAGTCGCAGCCACCCTTTTCCATTCCCTGTGTTGAGCCCTaGTTCCGCAGCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FLLMGSHIILESQPPFSIPCVEP*FRSSFC
Trigger: GCAGAAGGAGCTGCGGAATCAGGGCTCAACACAGGG...AATGGAAAAGGGTGGCTGCGACTCAAGAATAATATGGGAGCCCATGAGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp CAACTTCATGCAAACACTAACTCCCCTGCTCCCCATATTAAATGCTGTGCATGCCACCGCCGTTGGGCTTaGGTTCCATGGCATCACGGT +
Preference number: 4 (lower is better)
Translates to: QLHANTNSPAPHIKCCACHRRWA*VPWHHG
Trigger: ACCGTGATGCCATGGAACTCAAGCCCAACGGCGGTG...GCATGCACAGCATTTAATATGGGGAGCAGGGGAGTTAGTGTTTGCATGAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp GATATCAAATGGACCAGATATCACAGGGTGAACAAAATCTCCTTAAACAGAAGGCCCAGACTGTGGCGGTaGCGCACACGGGGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: DIKWTRYHRVNKISLNRRPRLWR*RTRGSG
Trigger: TCCCGAGCCCCGTGTGCGGCACCGCCACAGTCTGGG...CCTTCTGTTTAAGGAGATTTTGTTCACCCTGTGATATCTGGTCCATTTGATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ATTGGGCTGTTGACTTTGAGACATTTTTGGTCAGCACCGCCGTTGGGCTTGAGTAAATGTGTTCTGCGGTaGCACCAGCCCTCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: IGLLTLRHFWSAPPLGLSKCVLR*HQPSLA
Trigger: GGCAAGAGAGGGCTGGTGGCACCGCAGAACACATTT...ACTCAAGCCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGTCAACAGCCCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACACCGCTGCCCAGACTGTaGCGGTGCCGCACACGGGGC +
Preference number: 4 (lower is better)
Translates to: SINVRGHEKDIILTMKATPLPRL*RCRTRG
Trigger: GCCCCGTGTGCGGCACCGCCACAGTCTGGGCAGCGG...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp CTGCTTAAGGGATTCACTGGTTTTCACATAGGCCAGAGACGTCTGAATGGGAGTGAGCGGCTCTCTACCTaGAGTTGGTTCCTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LLKGFTGFHIGQRRLNGSERLST*SWFLSG
Trigger: CCCTGAGAGGAACCAACTCCAGGTAGAGAGCCGCTC...ACTCCCATTCAGACGTCTCTGGCCTATGTGAAAACCAGTGAATCCCTTAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp GTAATCTGTGACACAGTCACCACGCTGGTTCCGGTGATGGAGGCTCCATTCTGTACTTTGAGACATTTTTaGTCAGCACCGCCGTTGGGC +
Preference number: 4 (lower is better)
Translates to: VICDTVTTLVPVMEAPFCTLRHF*SAPPLG
Trigger: GCCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGT...ACAGAATGGAGCCTCCATCACCGGAACCAGCGTGGTGACTGTGTCACAGATTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp GTAATCTGTGACACAGTCACCACGCTGGTTCCGGTGATGGAGGCTCCATTCTGTCTGAATCACTGCTCTTaGGGTCCTCAGACAATAGCC +
Preference number: 4 (lower is better)
Translates to: VICDTVTTLVPVMEAPFCLNHCS*GPQTIA
Trigger: GGCTATTGTCTGAGGACCCCAAGAGCAGTGATTCAG...ACAGAATGGAGCCTCCATCACCGGAACCAGCGTGGTGACTGTGTCACAGATTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp TGCTTGGCATCAGCCTGGATGGGACTGTGCTCTAGCGGACTTCGGGCCTCCCCATTCTTAGTGGGTTTTTaGTCACACTGTTCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: CLASAWMGLCSSGLRASPFLVGF*SHCSLN
Trigger: ATTCAGAGAACAGTGTGACCAAAAACCCACTAAGAA...TGGGGAGGCCCGAAGTCCGCTAGAGCACAGTCCCATCCAGGCTGATGCCAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACACCAGCCCGACCCGGATaGGCAGCTCTGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SINVRGHEKDIILTMKATPARPG*AALGRR
Trigger: CCTCCTCCCCAGAGCTGCTCATCCGGGTCGGGCTGG...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp GGTCACACAACTGTGTGTCCAGGATGCAAATCCAAGGGGTCAGATTCCAAACAGAGAGGACACGTACAATaGATCCTTGCTGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GHTTVCPGCKSKGSDSKQRGHVQ*ILAGSS
Trigger: GGAGGACCCAGCAAGGATTCATTGTACGTGTCCTCT...CTGTTTGGAATCTGACCCCTTGGATTTGCATCCTGGACACACAGTTGTGTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR TCA 90 bp CTTCGGGCCTCCCCAGCCTTATCCAAACGAAGGTCACTTTTTGTAATTCCACTGTTGGGATTTGGGAGATaGGGCCTGGGGTACGCTTTT +
Preference number: 4 (lower is better)
Translates to: LRASPALSKRRSLFVIPLLGFGR*GLGYAF
Trigger: AAAAGCGTACCCCAGGCCTCATCTCCCAAATCCCAA...CAGTGGAATTACAAAAAGTGACCTTCGTTTGGATAAGGCTGGGGAGGCCCGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR GCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCCCACCAGCCCTCTCTTaGCCCCCGGCATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILPPALS*PPASWV
Trigger: GACCCAGGATGCCGGGGGGCAAGAGAGGGCTGGTGG...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp AAGACTAAAATTCAGTCTTTAGTATCCCCCTTTCACAAATGGACCTGCCTGAGCCCGGATGAGCAGCTCTaGGGAGGAGGACCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: KTKIQSLVSPFHKWTCLSPDEQL*GGGPGS
Trigger: ACTGCCTGGTCCTCCTCCCCAGAGCTGCTCATCCGG...GCTCAGGCAGGTCCATTTGTGAAAGGGGGATACTAAAGACTGAATTTTAGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCCCGGCATCCTGGGTCTaGAGAGCAGCGGCCAGGATC +
Preference number: 4 (lower is better)
Translates to: TFAILLQPPVEDTASDLTPASWV*RAAARI
Trigger: GATCCTGGCCGCTGCTCTCCAGACCCAGGATGCCGG...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp GTAATCTGTGACACAGTCACCACGCTGGTTCCGGTGATGGAGGCTCCATTCTGTGTGTGGTGGCGTCTTTaGCGCTTCTTGTTTATACTG +
Preference number: 4 (lower is better)
Translates to: VICDTVTTLVPVMEAPFCVWWRL*RFLFIL
Trigger: CAGTATAAACAAGAAGCGCCAAAGACGCCACCACAC...ACAGAATGGAGCCTCCATCACCGGAACCAGCGTGGTGACTGTGTCACAGATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp GTAATCTGTGACACAGTCACCACGCTGGTTCCGGTGATGGAGGCTCCATTCTGTCCCATATCCCAGCACTaGTATTGTAGCGATATGGAG +
Preference number: 4 (lower is better)
Translates to: VICDTVTTLVPVMEAPFCPISQH*YCSDME
Trigger: CTCCATATCGCTACAATACCAGTGCTGGGATATGGG...ACAGAATGGAGCCTCCATCACCGGAACCAGCGTGGTGACTGTGTCACAGATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp GAATCACTGCTCTTGGGGTCCTCAGACAATAGCCCCATTGACTCAGCTTTAGTGGCAGACACCCATCGCTaGCCAATCGAAAAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: ESLLLGSSDNSPIDSALVADTHR*PIEKQD
Trigger: ATCCTGCTTTTCGATTGGCCAGCGATGGGTGTCTGC...CACTAAAGCTGAGTCAATGGGGCTATTGTCTGAGGACCCCAAGAGCAGTGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp CTTCGGGCCTCCCCAGCCTTATCCAAACGAAGGTCACTTTTTGTAATTCCACTGGAAGAGCTTTCTGACTaGGTGGTCCACGGGAATGCT +
Preference number: 4 (lower is better)
Translates to: LRASPALSKRRSLFVIPLEELSD*VVHGNA
Trigger: AGCATTCCCGTGGACCACCCAGTCAGAAAGCTCTTC...CAGTGGAATTACAAAAAGTGACCTTCGTTTGGATAAGGCTGGGGAGGCCCGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR CAA 72 bp CTGTTGACTTTGAGACATTTTTGGTCAGCACCGCCGTaGGGCTTGAGTTCCATGGCATCACGGTTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLTLRHFWSAPP*GLSSMASRLFC
Trigger: GCAGAACAACCGTGATGCCATGGAACTCAAGCCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGTCAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR CAA 72 bp GCAGTCATTCTGCAGCTGAGCAGCTGGATGTCCTCTTaGAGTTCGTGTTTGACTTCCTGCAGTGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: AVILQLSSWMSS*SSCLTSCSVVC
Trigger: ACAGACCACACTGCAGGAAGTCAAACACGAACTCAAAGAGGACATCCAGCTGCTCAGCTGCAGAATGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp TGGTCACACTGTTCTCTGAATCACTGCTCTTGGGGTCCTCAGACAATAGCCCCACTGAGGAAGGATATCTaGTCCCAGCTGAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: WSHCSLNHCSWGPQTIAPLRKDI*SQLKNF
Trigger: GAAGTTCTTCAGCTGGGATCAGATATCCTTCCTCAG...TGGGGCTATTGTCTGAGGACCCCAAGAGCAGTGATTCAGAGAACAGTGTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCTCCCCGGGAGCACAGTaGATGGTTTGGAACTCTACC +
Preference number: 4 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCASPGAQ*MVWNST
Trigger: GGTAGAGTTCCAAACCATTCACTGTGCTCCCGGGGA...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ATTGGGCTGTTGACTTTGAGACATTTTTGGTCAGCACCGCCGTTGGGCTTGAGTCCTCGTAGTCTCCGATaGTATACCATATGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: IGLLTLRHFWSAPPLGLSPRSLR*YTICRP
Trigger: TGGCCTGCATATGGTATAGCATCGGAGACTACGAGG...ACTCAAGCCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGTCAACAGCCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR GCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTGCCTGGATGGGACTGTaGTCTAGCGGACTTCGGGCC +
Preference number: 4 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFAWMGL*SSGLRA
Trigger: GGCCCGAAGTCCGCTAGAGCACAGTCCCATCCAGGC...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp TGGTCACACTGTTCTCTGAATCACTGCTCTTGGGGTCCTCAGACAATAGCCCCAACAATGAATCCTTGCTaGGTCCTCCTTCCCATATCC +
Preference number: 4 (lower is better)
Translates to: WSHCSLNHCSWGPQTIAPTMNPC*VLLPIS
Trigger: GGATATGGGAAGGAGGACCCAGCAAGGATTCATTGT...TGGGGCTATTGTCTGAGGACCCCAAGAGCAGTGATTCAGAGAACAGTGTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp GCAAATCCAAGGGGTCAGATTCCAAACAGTCTTAACCATTCCACTCTCCTGCTCCGGGAGCACAGTGAATaGTTTGGAACTCTACCGCCA +
Preference number: 4 (lower is better)
Translates to: ANPRGQIPNSLNHSTLLLREHSE*FGTLPP
Trigger: TGGCGGTAGAGTTCCAAACCATTCACTGTGCTCCCG...GAGCAGGAGAGTGGAATGGTTAAGACTGTTTGGAATCTGACCCCTTGGATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CCA 90 bp AATCCAAGGGGTCAGATTCCAAACAGTCTTAACCATTCCACTCTCCTGCTCCTCACGTTCGCACATGCATaGGCAAGGGTGGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: NPRGQIPNSLNHSTLLLLTFAHA*ARVVSF
Trigger: GAAGGAAACCACCCTTGCCCATGCATGTGCGAACGT...GAGGAGCAGGAGAGTGGAATGGTTAAGACTGTTTGGAATCTGACCCCTTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CCA 90 bp AGCTGGATGTCCTCTTTGAGTTCGTGTTTGACTTCCTGCAGTGTGGTCTGTAAGGATAAAAGGGGTGCTTaGCATCAGCCTGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: SWMSSLSSCLTSCSVVCKDKRGA*HQPGWD
Trigger: GTCCCATCCAGGCTGATGCCAAGCACCCCTTTTATC...CTTACAGACCACACTGCAGGAAGTCAAACACGAACTCAAAGAGGACATCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR CAA 72 bp ACTTTGAGACATTTTTGGTCAGCACCGCCGTTGGGCTaGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGG +
Preference number: 4 (lower is better)
Translates to: TLRHFWSAPPLG*SSMASRLFCLR
Trigger: CCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp CCAAGGGGTCAGATTCCAAACAGTCTTAACCATTCCACTCTCCTGCTCCTCAAGTGCTGCTTTTCTGCATaGCGTCAGCTCGATGATATC +
Preference number: 4 (lower is better)
Translates to: PRGQIPNSLNHSTLLLLKCCFSA*RQLDDI
Trigger: GATATCATCGAGCTGACGTCATGCAGAAAAGCAGCA...CTTGAGGAGCAGGAGAGTGGAATGGTTAAGACTGTTTGGAATCTGACCCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR TCA 90 bp AGGCATAAAGAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGTGTCCAGGATCCCCGGGAGCACAGTaGATGGTTTGGAACTCTACC +
Preference number: 4 (lower is better)
Translates to: RHKEFKWFPLGHTTVCPGSPGAQ*MVWNST
Trigger: GGTAGAGTTCCAAACCATTCACTGTGCTCCCGGGGA...TCCTGGACACACAGTTGTGTGACCTAAGGGAAACCACTTAAACTCTTTATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR TCA 90 bp GCTCCCATATTATTCTTGAGTCGCAGCCACCCTTTTCCATTTCCATTCTTCATTCTCCAGCATGGTAAATaGGGTCCCCGGGAGCACAGT +
Preference number: 4 (lower is better)
Translates to: APILFLSRSHPFPFPFFILQHGK*GPREHS
Trigger: ACTGTGCTCCCGGGGACCTCATTTACCATGCTGGAG...AATGAAGAATGGAAATGGAAAAGGGTGGCTGCGACTCAAGAATAATATGGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp AGGCATAAAGAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGTGTCCAGGAGACTTCCAAGGATCCTaGCACCACAAAGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: RHKEFKWFPLGHTTVCPGDFQGS*HHKAEG
Trigger: GCCCTCTGCTTTGTGGTGTCAGGATCCTTGGAAGTC...TCCTGGACACACAGTTGTGTGACCTAAGGGAAACCACTTAAACTCTTTATGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR TCA 90 bp GGCTTGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGGGATTCACTGGTTTTCCCTCATCATCCTGGATaGCTTCCAAGGATCCTGACA +
Preference number: 4 (lower is better)
Translates to: GLSSMASRLFCLRDSLVFPHHPG*LPRILT
Trigger: TGTCAGGATCCTTGGAAGTCATCCAGGATGATGAGG...GAAAACCAGTGAATCCCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCCCCTGTGTTGAGCCCTaGTTCCGCAGCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TFAILLQPPVEDTASDLTPCVEP*FRSSFC
Trigger: GCAGAAGGAGCTGCGGAATCAGGGCTCAACACAGGG...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp CTGCTTAAGGGATTCACTGGTTTTCACATAGGCCAGAGACGTCTGAATGGGAGTAATGGGAGTAATCTGTaGCACAGTCACCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLKGFTGFHIGQRRLNGSNGSNL*HSHHAG
Trigger: ACCAGCGTGGTGACTGTGTCACAGATTACTCCCATT...ACTCCCATTCAGACGTCTCTGGCCTATGTGAAAACCAGTGAATCCCTTAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCGGTCACACTGTTCTCTaGATCACTGCTCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCAGHTVL*ITALGV
Trigger: GACCCCAAGAGCAGTGATTCAGAGAACAGTGTGACC...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp TTTCTCCTCATGGGCTCCCATATTATTCTTGAGTCGCAGCCACCCTTTTCCATTGGTCACACTGTTCTCTaGATCACTGCTCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: FLLMGSHIILESQPPFSIGHTVL*ITALGV
Trigger: GACCCCAAGAGCAGTGATTCAGAGAACAGTGTGACC...AATGGAAAAGGGTGGCTGCGACTCAAGAATAATATGGGAGCCCATGAGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp CAACTTCATGCAAACACTAACTCCCCTGCTCCCCATATTAAATGCTGTGCATGCCAGTCATTCTGCAGCTaGGCAGCTGGATGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QLHANTNSPAPHIKCCACQSFCS*AAGCPL
Trigger: AAGAGGACATCCAGCTGCTCAGCTGCAGAATGACTG...GCATGCACAGCATTTAATATGGGGAGCAGGGGAGTTAGTGTTTGCATGAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCTTGGGATTTGGGAGATaGGGCCTGGGGTACGCTTTT +
Preference number: 4 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCALGFGR*GLGYAF
Trigger: AAAAGCGTACCCCAGGCCTCATCTCCCAAATCCCAA...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp GTCACACTGTTCTCTGAATCACTGCTCTTGGGGTCCTCAGACAATAGCCCCATTGATATGGAGTCCCAATaGTCAAAGCCAGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: VTLFSESLLLGSSDNSPIDMESQ*SKPAGR
Trigger: TCTACCAGCTGGCTTTGAGCATTGGGACTCCATATC...AATGGGGCTATTGTCTGAGGACCCCAAGAGCAGTGATTCAGAGAACAGTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR GCA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATAGTCACCTCATTCTTCTaGCGGAGGCGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGIVTSFF*RRRSSS
Trigger: GGAGGAGGAGCGCCTCCGGCAGAAGAATGAGGTGAC...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCCGCAGCTCCTTCTGCTaGTTGAACTTCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCARSSFC*LNFWKS
Trigger: GCTCTTCCAGAAGTTCAAGCAGCAGAAGGAGCTGCG...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp TTCTTAGTGGGTTTTTGGTCACACTGTTCTCTGAATCACTGCTCTTGGGGTCCTCGCAGCTCCTTCTGCTaGTTGAACTTCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: FLVGFWSHCSLNHCSWGPRSSFC*LNFWKS
Trigger: GCTCTTCCAGAAGTTCAAGCAGCAGAAGGAGCTGCG...AGGACCCCAAGAGCAGTGATTCAGAGAACAGTGTGACCAAAAACCCACTAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR GCA 90 bp AGCTGGATGTCCTCTTTGAGTTCGTGTTTGACTTCCTGCAGTGTGGTCTGTAAGTTCCGCAGCTCCTTCTaGTGCTTGAACTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SWMSSLSSCLTSCSVVCKFRSSF*CLNFWK
Trigger: CTTCCAGAAGTTCAAGCAGCAGAAGGAGCTGCGGAA...CTTACAGACCACACTGCAGGAAGTCAAACACGAACTCAAAGAGGACATCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp GGTCACACAACTGTGTGTCCAGGATGCAAATCCAAGGGGTCAGATTCCAAACAGGTGTGGTGGCGTCTTTaGCGCTTCTTGTTTATACTG +
Preference number: 4 (lower is better)
Translates to: GHTTVCPGCKSKGSDSKQVWWRL*RFLFIL
Trigger: CAGTATAAACAAGAAGCGCCAAAGACGCCACCACAC...CTGTTTGGAATCTGACCCCTTGGATTTGCATCCTGGACACACAGTTGTGTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CCA 90 bp TTTTTCTCCTCATGGGCTCCCATATTATTCTTGAGTCGCAGCCACCCTTTTCCACGGGAGCACAGTGAATaGTTTGGAACTCTACCGCCA +
Preference number: 4 (lower is better)
Translates to: FFSSWAPILFLSRSHPFPREHSE*FGTLPP
Trigger: TGGCGGTAGAGTTCCAAACCATTCACTGTGCTCCCG...TGGAAAAGGGTGGCTGCGACTCAAGAATAATATGGGAGCCCATGAGGAGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCACGTTCGCACATGCATaGGCAAGGGTGGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCATFAHA*ARVVSF
Trigger: GAAGGAAACCACCCTTGCCCATGCATGTGCGAACGT...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp GCTCCCATATTATTCTTGAGTCGCAGCCACCCTTTTCCATTTCCATTCTTCATTTGGCATCAGCCTGGATaGGACTGTGCTCTAGCGGAC +
Preference number: 4 (lower is better)
Translates to: APILFLSRSHPFPFPFFIWHQPG*DCALAD
Trigger: GTCCGCTAGAGCACAGTCCCATCCAGGCTGATGCCA...AATGAAGAATGGAAATGGAAAAGGGTGGCTGCGACTCAAGAATAATATGGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
3UTR CAA 72 bp CTTCATTCTTATTGGGCTGTTGACTTTGAGACATTTTaGGTCAGCACCGCCGTTGGGCTTGAGTTCCATGGC +
Preference number: 4 (lower is better)
Translates to: LHSYWAVDFETF*VSTAVGLEFHG
Trigger: GCCATGGAACTCAAGCCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGTCAACAGCCCAATAAGAATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp GGCTTGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGGGATTCACTGGTTTTCTGCTGCTTTTCTGCATaGCGTCAGCTCGATGATATC +
Preference number: 4 (lower is better)
Translates to: GLSSMASRLFCLRDSLVFCCFSA*RQLDDI
Trigger: GATATCATCGAGCTGACGTCATGCAGAAAAGCAGCA...GAAAACCAGTGAATCCCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTCTCCAGCATGGTAAATaGGGTCCCCGGGAGCACAGT +
Preference number: 4 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFLQHGK*GPREHS
Trigger: ACTGTGCTCCCGGGGACCTCATTTACCATGCTGGAG...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAAAGGGTCACCCTGTGTTaGGCCCTGATTCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHERVTLC*ALIPQL
Trigger: GAGCTGCGGAATCAGGGCTCAACACAGGGTGACCCT...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp GGCTTGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGGGATTCACTGGTTTTCCTCCCATATTATTCTTaGGTCGCAGCCACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GLSSMASRLFCLRDSLVFLPYYS*VAATLF
Trigger: GAAAAGGGTGGCTGCGACTCAAGAATAATATGGGAG...GAAAACCAGTGAATCCCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR GCA 90 bp AATCCAAGGGGTCAGATTCCAAACAGTCTTAACCATTCCACTCTCCTGCTCCTCTTCATTGGCGTGAGCTaGTGCAAAACACTTCGGCTA +
Preference number: 4 (lower is better)
Translates to: NPRGQIPNSLNHSTLLLLFIGVS*CKTLRL
Trigger: TAGCCGAAGTGTTTTGCAGCAGCTCACGCCAATGAA...GAGGAGCAGGAGAGTGGAATGGTTAAGACTGTTTGGAATCTGACCCCTTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR GCA 90 bp ACTTCGGGCCTCCCCAGCCTTATCCAAACGAAGGTCACTTTTTGTAATTCCACTTTCATTGGCGTGAGCTaGTGCAAAACACTTCGGCTA +
Preference number: 4 (lower is better)
Translates to: TSGLPSLIQTKVTFCNSTFIGVS*CKTLRL
Trigger: TAGCCGAAGTGTTTTGCAGCAGCTCACGCCAATGAA...AGTGGAATTACAAAAAGTGACCTTCGTTTGGATAAGGCTGGGGAGGCCCGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR GCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCCCTCGTAGTCTCCGATaGTATACCATATGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCAPRSLR*YTICRP
Trigger: TGGCCTGCATATGGTATAGCATCGGAGACTACGAGG...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp AATCCAAGGGGTCAGATTCCAAACAGTCTTAACCATTCCACTCTCCTGCTCCTCGATATGGAGTCCCAATaGTCAAAGCCAGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: NPRGQIPNSLNHSTLLLLDMESQ*SKPAGR
Trigger: TCTACCAGCTGGCTTTGAGCATTGGGACTCCATATC...GAGGAGCAGGAGAGTGGAATGGTTAAGACTGTTTGGAATCTGACCCCTTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR GCA 90 bp GGCTTGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGGGATTCACTGGTTTTCCGTACAATGAATCCTTaGTGGGTCCTCCTTCCCATA +
Preference number: 4 (lower is better)
Translates to: GLSSMASRLFCLRDSLVFRTMNP*WVLLPI
Trigger: TATGGGAAGGAGGACCCAGCAAGGATTCATTGTACG...GAAAACCAGTGAATCCCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR GCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTGTCACAGTACGTCAGTaGCCGGACGTTCGCACATGC +
Preference number: 4 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFVTVRQ*PDVRTC
Trigger: GCATGTGCGAACGTCCGGGCACTGACGTACTGTGAC...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ACTTCGGGCCTCCCCAGCCTTATCCAAACGAAGGTCACTTTTTGTAATTCCACTTGTTCTCTGAATCACTaGTCTTGGGGTCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: TSGLPSLIQTKVTFCNSTCSLNH*SWGPQT
Trigger: TGTCTGAGGACCCCAAGAGCAGTGATTCAGAGAACA...AGTGGAATTACAAAAAGTGACCTTCGTTTGGATAAGGCTGGGGAGGCCCGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR GCA 90 bp GTAATCTGTGACACAGTCACCACGCTGGTTCCGGTGATGGAGGCTCCATTCTGTAAAATTTCTGCCACCTaGTTTTCTAGGGCAGTCATT +
Preference number: 4 (lower is better)
Translates to: VICDTVTTLVPVMEAPFCKISAT*FSRAVI
Trigger: AATGACTGCCCTAGAAAAGCAGGTGGCAGAAATTTT...ACAGAATGGAGCCTCCATCACCGGAACCAGCGTGGTGACTGTGTCACAGATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR GCA 90 bp CTCCTCAAGGTAACTTTTATACTTTCTCCTGGACTCCGTGAAAACTCGGATAGACCTTCACAGAGCGTTTaGCATGGAGAACCATCCCCG +
Preference number: 4 (lower is better)
Translates to: LLKVTFILSPGLRENSDRPSQSV*HGEPSP
Trigger: CGGGGATGGTTCTCCATGGCAAACGCTCTGTGAAGG...TCTATCCGAGTTTTCACGGAGTCCAGGAGAAAGTATAAAAGTTACCTTGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTATGCAGGCCAGCCAGTaGGCCACCAGTCCAAACACA +
Preference number: 4 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFMQASQ*ATSPNT
Trigger: TGTGTTTGGACTGGTGGCCCACTGGCTGGCCTGCAT...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ATTGGGCTGTTGACTTTGAGACATTTTTGGTCAGCACCGCCGTTGGGCTTGAGTGGTATTGTAGCGATATaGAGTCCCAATGCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: IGLLTLRHFWSAPPLGLSGIVAI*SPNAQS
Trigger: GCTTTGAGCATTGGGACTCCATATCGCTACAATACC...ACTCAAGCCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGTCAACAGCCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp GCAAATCCAAGGGGTCAGATTCCAAACAGTCTTAACCATTCCACTCTCCTGCTCATGCATGGGCAAGGGTaGTTTCCTTCCAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: ANPRGQIPNSLNHSTLLLMHGQG*FPSRRC
Trigger: ACATCTTCTGGAAGGAAACCACCCTTGCCCATGCAT...GAGCAGGAGAGTGGAATGGTTAAGACTGTTTGGAATCTGACCCCTTGGATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CCA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATAGAGCGGCTCTCTACCTaGAGTTGGTTCCTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGIERLST*SWFLSG
Trigger: CCCTGAGAGGAACCAACTCCAGGTAGAGAGCCGCTC...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp CAACTTCATGCAAACACTAACTCCCCTGCTCCCCATATTAAATGCTGTGCATGCACTTTGAGACATTTTTaGTCAGCACCGCCGTTGGGC +
Preference number: 4 (lower is better)
Translates to: QLHANTNSPAPHIKCCACTLRHF*SAPPLG
Trigger: GCCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGT...GCATGCACAGCATTTAATATGGGGAGCAGGGGAGTTAGTGTTTGCATGAAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTTGGCATCAGCCTGGATaGGACTGTGCTCTAGCGGAC +
Preference number: 4 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFWHQPG*DCALAD
Trigger: GTCCGCTAGAGCACAGTCCCATCCAGGCTGATGCCA...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp GCAAATCCAAGGGGTCAGATTCCAAACAGTCTTAACCATTCCACTCTCCTGCTCCGTCCAACCTTTTGTTaGATCATCCTCTATTGGCTG +
Preference number: 4 (lower is better)
Translates to: ANPRGQIPNSLNHSTLLLRPTFC*IILYWL
Trigger: CAGCCAATAGAGGATGATTCAACAAAAGGTTGGACG...GAGCAGGAGAGTGGAATGGTTAAGACTGTTTGGAATCTGACCCCTTGGATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR TCA 90 bp GGCTTGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGGGATTCACTGGTTTTCCGTCCAACCTTTTGTTaGATCATCCTCTATTGGCTG +
Preference number: 4 (lower is better)
Translates to: GLSSMASRLFCLRDSLVFRPTFC*IILYWL
Trigger: CAGCCAATAGAGGATGATTCAACAAAAGGTTGGACG...GAAAACCAGTGAATCCCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp AGCTGGATGTCCTCTTTGAGTTCGTGTTTGACTTCCTGCAGTGTGGTCTGTAAGACCTTCCGGTTTAGATaGACACAGATATCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SWMSSLSSCLTSCSVVCKTFRFR*TQISAL
Trigger: GAGAGCTGATATCTGTGTTCATCTAAACCGGAAGGT...CTTACAGACCACACTGCAGGAAGTCAAACACGAACTCAAAGAGGACATCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp AGGCATAAAGAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGTGTCCAGGACCTCATCATCCTGGATaGCTTCCAAGGATCCTGACA +
Preference number: 4 (lower is better)
Translates to: RHKEFKWFPLGHTTVCPGPHHPG*LPRILT
Trigger: TGTCAGGATCCTTGGAAGTCATCCAGGATGATGAGG...TCCTGGACACACAGTTGTGTGACCTAAGGGAAACCACTTAAACTCTTTATGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR TCA 90 bp CAACTTCATGCAAACACTAACTCCCCTGCTCCCCATATTAAATGCTGTGCATGCAACATGCATTCCTGCTaGAAACAGCAGGGTGCATTC +
Preference number: 4 (lower is better)
Translates to: QLHANTNSPAPHIKCCACNMHSC*KQQGAF
Trigger: GAATGCACCCTGCTGTTTTCAGCAGGAATGCATGTT...GCATGCACAGCATTTAATATGGGGAGCAGGGGAGTTAGTGTTTGCATGAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCGAAGGCCCCAGCATTTaGCAAGCTTTCAAACTGCTT +
Preference number: 4 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCAEGPSI*QAFKLL
Trigger: AAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTC...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCTGGAAGGCGACTGCTTaGTGGAAGATGCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: TFAILLQPPVEDTASDLTWKATA*WKMLVQ
Trigger: CTGCACCAGCATCTTCCATCAAGCAGTCGCCTTCCA...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp AGGCATAAAGAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGTGTCCAGGACCTCGTAGTCTCCGATaGTATACCATATGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RHKEFKWFPLGHTTVCPGPRSLR*YTICRP
Trigger: TGGCCTGCATATGGTATAGCATCGGAGACTACGAGG...TCCTGGACACACAGTTGTGTGACCTAAGGGAAACCACTTAAACTCTTTATGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR GCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAACCGGACGTTCGCACATaGATGGGCAAGGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHEPDVRT*MGKGGF
Trigger: GAAACCACCCTTGCCCATGCATGTGCGAACGTCCGG...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp CATGGAATGAGAACATTTTACGAGCTAGGACCTATTATTCTCTACTGTAGGACACCGGACGTTCGCACATaGATGGGCAAGGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: HGMRTFYELGPIILYCRTPDVRT*MGKGGF
Trigger: GAAACCACCCTTGCCCATGCATGTGCGAACGTCCGG...TGTCCTACAGTAGAGAATAATAGGTCCTAGCTCGTAAAATGTTCTCATTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CCA 90 bp CATGGAATGAGAACATTTTACGAGCTAGGACCTATTATTCTCTACTGTAGGACAATGCAGGCCAGCCAGTaGGCCACCAGTCCAAACACA +
Preference number: 4 (lower is better)
Translates to: HGMRTFYELGPIILYCRTMQASQ*ATSPNT
Trigger: TGTGTTTGGACTGGTGGCCCACTGGCTGGCCTGCAT...TGTCCTACAGTAGAGAATAATAGGTCCTAGCTCGTAAAATGTTCTCATTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CCA 90 bp TTGGGCTTGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGGGATTCACTGGTTTGTCCTTGGGACAGATaGAGAGGACCTTTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: LGLSSMASRLFCLRDSLVCPWDR*RGPFLY
Trigger: ATACAGAAAAGGTCCTCTCCATCTGTCCCAAGGACA...AACCAGTGAATCCCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp AAGACTAAAATTCAGTCTTTAGTATCCCCCTTTCACAAATGGACCTGCCTGAGCGCAGACACCCATCGCTaGCCAATCGAAAAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: KTKIQSLVSPFHKWTCLSADTHR*PIEKQD
Trigger: ATCCTGCTTTTCGATTGGCCAGCGATGGGTGTCTGC...GCTCAGGCAGGTCCATTTGTGAAAGGGGGATACTAAAGACTGAATTTTAGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCAGCTTTCTGACTGGGTaGTCCACGGGAATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TFAILLQPPVEDTASDLTSFLTG*STGMLR
Trigger: CCTCAGCATTCCCGTGGACCACCCAGTCAGAAAGCT...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp CCAAGGGGTCAGATTCCAAACAGTCTTAACCATTCCACTCTCCTGCTCCTCAAGCCCACGAAAGTCGTGTaGAAATTTAAAACGATGTCA +
Preference number: 4 (lower is better)
Translates to: PRGQIPNSLNHSTLLLLKPTKVV*KFKTMS
Trigger: TGACATCGTTTTAAATTTTCACACGACTTTCGTGGG...CTTGAGGAGCAGGAGAGTGGAATGGTTAAGACTGTTTGGAATCTGACCCCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR TCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAAGACTTCCAAGGATCCTaGCACCACAAAGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHEDFQGS*HHKAEG
Trigger: GCCCTCTGCTTTGTGGTGTCAGGATCCTTGGAAGTC...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCGGTCCACGGGAATGCTaGGGGTCACCTCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILGPREC*GSPHSS
Trigger: AGAAGAATGAGGTGACCCTCAGCATTCCCGTGGACC...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTCCACGCTGGTTCCGGTaGTGGAGGCTCCATTCTGTA +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPPRWFR*WRLHSV
Trigger: TACAGAATGGAGCCTCCATCACCGGAACCAGCGTGG...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp AAGACTAAAATTCAGTCTTTAGTATCCCCCTTTCACAAATGGACCTGCCTGAGCAATGGGAGTAATCTGTaGCACAGTCACCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: KTKIQSLVSPFHKWTCLSNGSNL*HSHHAG
Trigger: ACCAGCGTGGTGACTGTGTCACAGATTACTCCCATT...GCTCAGGCAGGTCCATTTGTGAAAGGGGGATACTAAAGACTGAATTTTAGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp TATGTTTTTAATCATCATCTTCTTTGGCAGGCCAGAATCCAGCTGGACATGCAATCCAAAAATGTGTTCTaGGGTGCCACCAGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: YVFNHHLLWQARIQLDMQSKNVF*GATSPL
Trigger: GAGAGGGCTGGTGGCACCGCAGAACACATTTTTGGA...TTGCATGTCCAGCTGGATTCTGGCCTGCCAAAGAAGATGATGATTAAAAACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCGCATCACGGTTGTTCTaGTTAAGGGATTCACTGGTT +
Preference number: 4 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCAASRLF*LRDSLV
Trigger: AACCAGTGAATCCCTTAAGCAGAACAACCGTGATGC...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCGCCACTAGCAAACTATaGCTCTCTCCATTAACCTCT +
Preference number: 4 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCAATSKL*LSPLTS
Trigger: AGAGGTTAATGGAGAGAGGCATAGTTTGCTAGTGGC...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCGGTATTGTAGCGATATaGAGTCCCAATGCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCAGIVAI*SPNAQS
Trigger: GCTTTGAGCATTGGGACTCCATATCGCTACAATACC...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp AGGCATAAAGAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGTGTCCAGGACCCATATCCCAGCACTaGTATTGTAGCGATATGGAG +
Preference number: 4 (lower is better)
Translates to: RHKEFKWFPLGHTTVCPGPISQH*YCSDME
Trigger: CTCCATATCGCTACAATACCAGTGCTGGGATATGGG...TCCTGGACACACAGTTGTGTGACCTAAGGGAAACCACTTAAACTCTTTATGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CCA 90 bp AGGCATAAAGAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGTGTCCAGGAACAATGAATCCTTGCTaGGTCCTCCTTCCCATATCC +
Preference number: 4 (lower is better)
Translates to: RHKEFKWFPLGHTTVCPGTMNPC*VLLPIS
Trigger: GGATATGGGAAGGAGGACCCAGCAAGGATTCATTGT...TCCTGGACACACAGTTGTGTGACCTAAGGGAAACCACTTAAACTCTTTATGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CCA 90 bp AGCTGGATGTCCTCTTTGAGTTCGTGTTTGACTTCCTGCAGTGTGGTCTGTAAGGGTATCGGTTGGTGTTaGCATACATTTGCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: SWMSSLSSCLTSCSVVCKGIGWC*HTFAGK
Trigger: TTTTCCAGCAAATGTATGCCAACACCAACCGATACC...CTTACAGACCACACTGCAGGAAGTCAAACACGAACTCAAAGAGGACATCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATACGGGAGCACAGTGAATaGTTTGGAACTCTACCGCCA +
Preference number: 4 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGIREHSE*FGTLPP
Trigger: TGGCGGTAGAGTTCCAAACCATTCACTGTGCTCCCG...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCGAAGAGCTTTCTGACTaGGTGGTCCACGGGAATGCT +
Preference number: 4 (lower is better)
Translates to: TFAILLQPPVEDTASDLTEELSD*VVHGNA
Trigger: AGCATTCCCGTGGACCACCCAGTCAGAAAGCTCTTC...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCTGCTTGGCATCAGCCTaGATGGGACTGTGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILCLASA*MGLCSS
Trigger: GCTAGAGCACAGTCCCATCCAGGCTGATGCCAAGCA...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp TATGTTTTTAATCATCATCTTCTTTGGCAGGCCAGAATCCAGCTGGACATGCAAGATAAAAGGGGTGCTTaGCATCAGCCTGGATGGGAC +
Preference number: 4 (lower is better)
Translates to: YVFNHHLLWQARIQLDMQDKRGA*HQPGWD
Trigger: GTCCCATCCAGGCTGATGCCAAGCACCCCTTTTATC...TTGCATGTCCAGCTGGATTCTGGCCTGCCAAAGAAGATGATGATTAAAAACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp AGCAAATTGAGGCATAAAGAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGACAGAGCGTTTGCCATaGAGAACCATCCCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: SKLRHKEFKWFPLGHTTVTERLP*RTIPVS
Trigger: GGAAACGGGGATGGTTCTCCATGGCAAACGCTCTGT...CACAGTTGTGTGACCTAAGGGAAACCACTTAAACTCTTTATGCCTCAATTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR TCA 90 bp CAACTTCATGCAAACACTAACTCCCCTGCTCCCCATATTAAATGCTGTGCATGCGCTTCTTGTTTATACTaGGGAAGGATATCTGATCCC +
Preference number: 4 (lower is better)
Translates to: QLHANTNSPAPHIKCCACASCLY*GRISDP
Trigger: GGGATCAGATATCCTTCCTCAGTATAAACAAGAAGC...GCATGCACAGCATTTAATATGGGGAGCAGGGGAGTTAGTGTTTGCATGAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAAAGAGGACACGTACAATaGATCCTTGCTGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHERGHVQ*ILAGSS
Trigger: GGAGGACCCAGCAAGGATTCATTGTACGTGTCCTCT...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCCAGTTATTAGCCAAGTaGAAACAAGATGGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCAQLLAK*KQDGLG
Trigger: GCCCAAACCATCTTGTTTTCACTTGGCTAATAACTG...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTAAATGTGTTCTGCGGTaGCACCAGCCCTCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPKCVLR*HQPSLA
Trigger: GGCAAGAGAGGGCTGGTGGCACCGCAGAACACATTT...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTTTCCGCAGCTCCTTCTaGTGCTTGAACTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFFRSSF*CLNFWK
Trigger: CTTCCAGAAGTTCAAGCAGCAGAAGGAGCTGCGGAA...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp CAACTTCATGCAAACACTAACTCCCCTGCTCCCCATATTAAATGCTGTGCATGCTTTCACAAATGGACCTaGCTGAGCCACAATAGCTTA +
Preference number: 4 (lower is better)
Translates to: QLHANTNSPAPHIKCCACFHKWT*LSHNSL
Trigger: TAAGCTATTGTGGCTCAGGCAGGTCCATTTGTGAAA...GCATGCACAGCATTTAATATGGGGAGCAGGGGAGTTAGTGTTTGCATGAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAAGCCCAACCAGCCAAGTaGTTAGGGGATTGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHEAQPAK*LGDWVC
Trigger: ACAAACCCAATCCCCTAAGCACTTGGCTGGTTGGGC...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp GGCTTGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGGGATTCACTGGTTTTCAGCCAACTGTCTATTTaGATGGTGTTAGTGACTTCA +
Preference number: 4 (lower is better)
Translates to: GLSSMASRLFCLRDSLVFSQLSI*MVLVTS
Trigger: TGAAGTCACTAACACCATCCAAATAGACAGTTGGCT...GAAAACCAGTGAATCCCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp AAGACTAAAATTCAGTCTTTAGTATCCCCCTTTCACAAATGGACCTGCCTGAGCACAATGAATCCTTGCTaGGTCCTCCTTCCCATATCC +
Preference number: 4 (lower is better)
Translates to: KTKIQSLVSPFHKWTCLSTMNPC*VLLPIS
Trigger: GGATATGGGAAGGAGGACCCAGCAAGGATTCATTGT...GCTCAGGCAGGTCCATTTGTGAAAGGGGGATACTAAAGACTGAATTTTAGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp AAATTGAGGCATAAAGAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGTGTGCAGACACCCATCGCTaGCCAATCGAAAAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: KLRHKEFKWFPLGHTTVCADTHR*PIEKQD
Trigger: ATCCTGCTTTTCGATTGGCCAGCGATGGGTGTCTGC...ACACACAGTTGTGTGACCTAAGGGAAACCACTTAAACTCTTTATGCCTCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CCA 90 bp CCATTCTTCATTCTTATTGGGCTGTTGACTTTGAGACATTTTTGGTCAGCACCGTGCTGCTTGAACTTCTaGAAGAGCTTTCTGACTGGG +
Preference number: 4 (lower is better)
Translates to: PFFILIGLLTLRHFWSAPCCLNF*KSFLTG
Trigger: CCCAGTCAGAAAGCTCTTCCAGAAGTTCAAGCAGCA...CGGTGCTGACCAAAAATGTCTCAAAGTCAACAGCCCAATAAGAATGAAGAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAACTGCAGCTGAGCAGCTaGATGTCCTCTTTGAGTTCG +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHELQLSS*MSSLSS
Trigger: CGAACTCAAAGAGGACATCCAGCTGCTCAGCTGCAG...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CAA 72 bp TTTCACAAATGGACCTGCCTGAGCCACAATAGCTTATaGAATCAACTCAGCAGAAGTCCAGCAGTAGAACTG +
Preference number: 4 (lower is better)
Translates to: FHKWTCLSHNSL*NQLSRSPAVEL
Trigger: CAGTTCTACTGCTGGACTTCTGCTGAGTTGATTCAATAAGCTATTGTGGCTCAGGCAGGTCCATTTGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CAA 72 bp TCTTCCTTTTTCTCCTCATGGGCTCCCATATTATTCTaGAGTCGCAGCCACCCTTTTCCATTTCCATTCTTC +
Preference number: 4 (lower is better)
Translates to: SSFFSSWAPILF*SRSHPFPFPFF
Trigger: GAAGAATGGAAATGGAAAAGGGTGGCTGCGACTCAAGAATAATATGGGAGCCCATGAGGAGAAAAAGGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR TCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTATTCACTGGAGCGCCTaGCGATGTTCTCCAAAAATG +
Preference number: 4 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFIHWSA*RCSPKM
Trigger: CATTTTTGGAGAACATCGTCAGGCGCTCCAGTGAAT...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp AAGACTAAAATTCAGTCTTTAGTATCCCCCTTTCACAAATGGACCTGCCTGAGCCGTCCAACCTTTTGTTaGATCATCCTCTATTGGCTG +
Preference number: 4 (lower is better)
Translates to: KTKIQSLVSPFHKWTCLSRPTFC*IILYWL
Trigger: CAGCCAATAGAGGATGATTCAACAAAAGGTTGGACG...GCTCAGGCAGGTCCATTTGTGAAAGGGGGATACTAAAGACTGAATTTTAGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp AGGCATAAAGAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGTGTCCAGGAGCTTCTTGTTTATACTaGGGAAGGATATCTGATCCC +
Preference number: 4 (lower is better)
Translates to: RHKEFKWFPLGHTTVCPGASCLY*GRISDP
Trigger: GGGATCAGATATCCTTCCTCAGTATAAACAAGAAGC...TCCTGGACACACAGTTGTGTGACCTAAGGGAAACCACTTAAACTCTTTATGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR TCA 90 bp GATATCAAATGGACCAGATATCACAGGGTGAACAAAATCTCCTTAAACAGAAGGCCTCATCATCCTGGATaGCTTCCAAGGATCCTGACA +
Preference number: 4 (lower is better)
Translates to: DIKWTRYHRVNKISLNRRPHHPG*LPRILT
Trigger: TGTCAGGATCCTTGGAAGTCATCCAGGATGATGAGG...CCTTCTGTTTAAGGAGATTTTGTTCACCCTGTGATATCTGGTCCATTTGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp CAACTTCATGCAAACACTAACTCCCCTGCTCCCCATATTAAATGCTGTGCATGCTGTCTATGTGCTAGTTaGGGCAACATAGAACATGAT +
Preference number: 4 (lower is better)
Translates to: QLHANTNSPAPHIKCCACCLCAS*GNIEHD
Trigger: ATCATGTTCTATGTTGCCTCAACTAGCACATAGACA...GCATGCACAGCATTTAATATGGGGAGCAGGGGAGTTAGTGTTTGCATGAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCCAAGATGGTTTGGGCTaGAGATTCCAGCATGTAGTG +
Preference number: 4 (lower is better)
Translates to: TFAILLQPPVEDTASDLTQDGLG*RFQHVV
Trigger: CACTACATGCTGGAATCTTCAGCCCAAACCATCTTG...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCGATTCTTCCTTTCTATaGTTACCTCTGGCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCADSSFL*LPLAQL
Trigger: TAACTGAGCCAGAGGTAATCATAGAAAGGAAGAATC...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTAAGTTGAGGAGCAAATaGGGGGTCCATGGCAACAAT +
Preference number: 4 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFKLRSK*GVHGNN
Trigger: ATTGTTGCCATGGACCCCTCATTTGCTCCTCAACTT...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp GCAAATCCAAGGGGTCAGATTCCAAACAGTCTTAACCATTCCACTCTCCTGCTCCACAGAGAAGCAAATTaGGGCATAAAGAGTTTAAGT +
Preference number: 4 (lower is better)
Translates to: ANPRGQIPNSLNHSTLLLHREAN*GIKSLS
Trigger: ACTTAAACTCTTTATGCCTCAATTTGCTTCTCTGTG...GAGCAGGAGAGTGGAATGGTTAAGACTGTTTGGAATCTGACCCCTTGGATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR GCA 90 bp CCATTCTTCATTCTTATTGGGCTGTTGACTTTGAGACATTTTTGGTCAGCACCGATTGGCGTGAGCTGCTaGAAAACACTTCGGCTATTT +
Preference number: 4 (lower is better)
Translates to: PFFILIGLLTLRHFWSAPIGVSC*KTLRLF
Trigger: AAATAGCCGAAGTGTTTTGCAGCAGCTCACGCCAAT...CGGTGCTGACCAAAAATGTCTCAAAGTCAACAGCCCAATAAGAATGAAGAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR GCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTTGTTCTCTGAATCACTaGTCTTGGGGTCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFCSLNH*SWGPQT
Trigger: TGTCTGAGGACCCCAAGAGCAGTGATTCAGAGAACA...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCACAAATATCTGCCACTaGACACTTCAAAACAGTCAC +
Preference number: 4 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCATNICH*TLQNSH
Trigger: GTGACTGTTTTGAAGTGTGCAGTGGCAGATATTTGT...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCTTCCTCCCATCAAAATaGAGCCCAACCAGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILFLPSK*SPTSQV
Trigger: CACTTGGCTGGTTGGGCTGCATTTTGATGGGAGGAA...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATAGTGTGGTGGCGTCTTTaGCGCTTCTTGTTTATACTG +
Preference number: 4 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGIVWWRL*RFLFIL
Trigger: CAGTATAAACAAGAAGCGCCAAAGACGCCACCACAC...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp CAACTTCATGCAAACACTAACTCCCCTGCTCCCCATATTAAATGCTGTGCATGCAGCCAACTGTCTATTTaGATGGTGTTAGTGACTTCA +
Preference number: 4 (lower is better)
Translates to: QLHANTNSPAPHIKCCACSQLSI*MVLVTS
Trigger: TGAAGTCACTAACACCATCCAAATAGACAGTTGGCT...GCATGCACAGCATTTAATATGGGGAGCAGGGGAGTTAGTGTTTGCATGAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp CTCCTCAAGGTAACTTTTATACTTTCTCCTGGACTCCGTGAAAACTCGGATAGAGGTATTGTAGCGATATaGAGTCCCAATGCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LLKVTFILSPGLRENSDRGIVAI*SPNAQS
Trigger: GCTTTGAGCATTGGGACTCCATATCGCTACAATACC...TCTATCCGAGTTTTCACGGAGTCCAGGAGAAAGTATAAAAGTTACCTTGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CCA 90 bp CTGCTTAAGGGATTCACTGGTTTTCACATAGGCCAGAGACGTCTGAATGGGAGTCAATGCCTTTTGACATaGACCATGTTGAGACAATAT +
Preference number: 4 (lower is better)
Translates to: LLKGFTGFHIGQRRLNGSQCLLT*TMLRQY
Trigger: ATATTGTCTCAACATGGTCCATGTCAAAAGGCATTG...ACTCCCATTCAGACGTCTCTGGCCTATGTGAAAACCAGTGAATCCCTTAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp CTCCTCAAGGTAACTTTTATACTTTCTCCTGGACTCCGTGAAAACTCGGATAGATGTCCTTGGGACAGATaGAGAGGACCTTTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: LLKVTFILSPGLRENSDRCPWDR*RGPFLY
Trigger: ATACAGAAAAGGTCCTCTCCATCTGTCCCAAGGACA...TCTATCCGAGTTTTCACGGAGTCCAGGAGAAAGTATAAAAGTTACCTTGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CCA 90 bp TTCTTAGTGGGTTTTTGGTCACACTGTTCTCTGAATCACTGCTCTTGGGGTCCTTCCTTTTTCTCCTCATaGGCTCCCATATTATTCTTG +
Preference number: 4 (lower is better)
Translates to: FLVGFWSHCSLNHCSWGPSFFSS*APILFL
Trigger: CAAGAATAATATGGGAGCCCATGAGGAGAAAAAGGA...AGGACCCCAAGAGCAGTGATTCAGAGAACAGTGTGACCAAAAACCCACTAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp CAACTTCATGCAAACACTAACTCCCCTGCTCCCCATATTAAATGCTGTGCATGCTATTGTAGCATTACATaGAGACGTGTTCCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: QLHANTNSPAPHIKCCACYCSIT*RRVPLK
Trigger: TTTCAGGGGAACACGTCTCCATGTAATGCTACAATA...GCATGCACAGCATTTAATATGGGGAGCAGGGGAGTTAGTGTTTGCATGAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCTTTAACAATGAAGCATaGGCCTGTATTCAACCACGT +
Preference number: 4 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCAFNNEA*ACIQPR
Trigger: ACGTGGTTGAATACAGGCCCATGCTTCATTGTTAAA...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCACAAGTATGCCATCCTaGACAAGTTCCTTAACCTAT +
Preference number: 4 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCATSMPS*TSSLTY
Trigger: ATAGGTTAAGGAACTTGTCCAGGATGGCATACTTGT...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp AAGACTAAAATTCAGTCTTTAGTATCCCCCTTTCACAAATGGACCTGCCTGAGCGACTATAAAAAGCTTTaGATGGTGTCAGTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: KTKIQSLVSPFHKWTCLSDYKKL*MVSVGS
Trigger: GGACCCCACTGACACCATCCAAAGCTTTTTATAGTC...GCTCAGGCAGGTCCATTTGTGAAAGGGGGATACTAAAGACTGAATTTTAGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp GAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGTGTCCAGGATGCAAATCCCTGTATATAGCAAAGTaGTCACTTCCACACACGTAT +
Preference number: 4 (lower is better)
Translates to: EFKWFPLGHTTVCPGCKSLYIAK*SLPHTY
Trigger: ATACGTGTGTGGAAGTGACCACTTTGCTATATACAG...GGATTTGCATCCTGGACACACAGTTGTGTGACCTAAGGGAAACCACTTAAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR TCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCTGCTGCTTTTCTGCATaGCGTCAGCTCGATGATATC +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILCCFSA*RQLDDI
Trigger: GATATCATCGAGCTGACGTCATGCAGAAAAGCAGCA...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCCTGAGGAAGGATATCTaGTCCCAGCTGAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILLRKDI*SQLKNF
Trigger: GAAGTTCTTCAGCTGGGATCAGATATCCTTCCTCAG...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp CATGGAATGAGAACATTTTACGAGCTAGGACCTATTATTCTCTACTGTAGGACACTGAGGAAGGATATCTaGTCCCAGCTGAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: HGMRTFYELGPIILYCRTLRKDI*SQLKNF
Trigger: GAAGTTCTTCAGCTGGGATCAGATATCCTTCCTCAG...TGTCCTACAGTAGAGAATAATAGGTCCTAGCTCGTAAAATGTTCTCATTCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR TCA 90 bp TATGTTTTTAATCATCATCTTCTTTGGCAGGCCAGAATCCAGCTGGACATGCAATGTGCATGCACTGACTaGAAAGTATGCTTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: YVFNHHLLWQARIQLDMQCACTD*KVCFPE
Trigger: TTCAGGGAAGCATACTTTTCAGTCAGTGCATGCACA...TTGCATGTCCAGCTGGATTCTGGCCTGCCAAAGAAGATGATGATTAAAAACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATAGGAGACGTGTTCCCCTaGAAACTTCCATTATGGTTA +
Preference number: 4 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGIGDVFP*KLPLWL
Trigger: TAACCATAATGGAAGTTTTCAGGGGAACACGTCTCC...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCCCCTTCATTCAAATCTaGGTAAATTCAACTGCTAAG +
Preference number: 4 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCAPFIQI*VNSTAK
Trigger: CTTAGCAGTTGAATTTACTCAGATTTGAATGAAGGG...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAAGTCAGTGATTCCGCATaGATGAGAGAGAGTGATCAG +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHEVSDSA*MRESDQ
Trigger: CTGATCACTCTCTCTCATTCATGCGGAATCACTGAC...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATAATTGGCGTGAGCTGCTaGAAAACACTTCGGCTATTT +
Preference number: 4 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGIIGVSC*KTLRLF
Trigger: AAATAGCCGAAGTGTTTTGCAGCAGCTCACGCCAAT...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCGATATGGAGTCCCAATaGTCAAAGCCAGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILDMESQ*SKPAGR
Trigger: TCTACCAGCTGGCTTTGAGCATTGGGACTCCATATC...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCCGTACAATGAATCCTTaGTGGGTCCTCCTTCCCATA +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILRTMNP*WVLLPI
Trigger: TATGGGAAGGAGGACCCAGCAAGGATTCATTGTACG...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTTCGTGTTTGACTTCCTaGAGTGTGGTCTGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPSCLTS*SVVCKA
Trigger: GGCCTTACAGACCACACTGCAGGAAGTCAAACACGA...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp CATGGAATGAGAACATTTTACGAGCTAGGACCTATTATTCTCTACTGTAGGACAACTGTGTGTCCAGGATaGAAATCCAAGGGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: HGMRTFYELGPIILYCRTTVCPG*KSKGSD
Trigger: ATCTGACCCCTTGGATTTGCATCCTGGACACACAGT...TGTCCTACAGTAGAGAATAATAGGTCCTAGCTCGTAAAATGTTCTCATTCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CCA 90 bp GATATCAAATGGACCAGATATCACAGGGTGAACAAAATCTCCTTAAACAGAAGGCCCATATCCCAGCACTaGTATTGTAGCGATATGGAG +
Preference number: 4 (lower is better)
Translates to: DIKWTRYHRVNKISLNRRPISQH*YCSDME
Trigger: CTCCATATCGCTACAATACCAGTGCTGGGATATGGG...CCTTCTGTTTAAGGAGATTTTGTTCACCCTGTGATATCTGGTCCATTTGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp CAACTTCATGCAAACACTAACTCCCCTGCTCCCCATATTAAATGCTGTGCATGCCAATGCCTTTTGACATaGACCATGTTGAGACAATAT +
Preference number: 4 (lower is better)
Translates to: QLHANTNSPAPHIKCCACQCLLT*TMLRQY
Trigger: ATATTGTCTCAACATGGTCCATGTCAAAAGGCATTG...GCATGCACAGCATTTAATATGGGGAGCAGGGGAGTTAGTGTTTGCATGAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATATGTCCTTGGGACAGATaGAGAGGACCTTTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGICPWDR*RGPFLY
Trigger: ATACAGAAAAGGTCCTCTCCATCTGTCCCAAGGACA...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp CTGCTTAAGGGATTCACTGGTTTTCACATAGGCCAGAGACGTCTGAATGGGAGTATTCTTCATTCTTATTaGGCTGTTGACTTTGAGACA +
Preference number: 4 (lower is better)
Translates to: LLKGFTGFHIGQRRLNGSILHSY*AVDFET
Trigger: TGTCTCAAAGTCAACAGCCCAATAAGAATGAAGAAT...ACTCCCATTCAGACGTCTCTGGCCTATGTGAAAACCAGTGAATCCCTTAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTCTGAATCACTGCTCTTaGGGTCCTCAGACAATAGCC +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPLNHCS*GPQTIA
Trigger: GGCTATTGTCTGAGGACCCCAAGAGCAGTGATTCAG...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTTGTCAGCTTACAAGATaGCAGCTGTTCTCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFCQLTR*QLFSKK
Trigger: CTTCTTGGAGAACAGCTGCCATCTTGTAAGCTGACA...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp CAACTTCATGCAAACACTAACTCCCCTGCTCCCCATATTAAATGCTGTGCATGCTTTGACAGTTTACTTTaGCCGATGTCTTTCAACTGT +
Preference number: 4 (lower is better)
Translates to: QLHANTNSPAPHIKCCACFDSLL*PMSFNC
Trigger: ACAGTTGAAAGACATCGGCCAAAGTAAACTGTCAAA...GCATGCACAGCATTTAATATGGGGAGCAGGGGAGTTAGTGTTTGCATGAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCATGACGTCAGCTCGATaGTATCCAGAGAGTTTACAA +
Preference number: 4 (lower is better)
Translates to: TFAILLQPPVEDTASDLTMTSAR*YPESLQ
Trigger: TTGTAAACTCTCTGGATATCATCGAGCTGACGTCAT...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCACCTTCCGGTTTAGATaGACACAGATATCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILTFRFR*TQISAL
Trigger: GAGAGCTGATATCTGTGTTCATCTAAACCGGAAGGT...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp AGCAAATTGAGGCATAAAGAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGAAGAGTGAGATTCCTTaGGAAGGAGTTTGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: SKLRHKEFKWFPLGHTTVKSEIP*EGVCKS
Trigger: GCTTTTGCAAACTCCTTCTCAAGGAATCTCACTCTT...CACAGTTGTGTGACCTAAGGGAAACCACTTAAACTCTTTATGCCTCAATTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR TCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTCTCCCATATTATTCTTaGGTCGCAGCCACCCTTTTC +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPLPYYS*VAATLF
Trigger: GAAAAGGGTGGCTGCGACTCAAGAATAATATGGGAG...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTGCCACAATAGCTTATTaGATCAACTCAGCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFATIAY*INSAEV
Trigger: GACTTCTGCTGAGTTGATTCAATAAGCTATTGTGGC...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATATGTAGGTCGATTAGGTaGAACTCTACGTCAATGTCA +
Preference number: 4 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGICRSIR*NSTSMS
Trigger: TGACATTGACGTAGAGTTTCACCTAATCGACCTACA...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCAAGCCAGGATGGAAGTaGGCTGACTATAAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: TFAILLQPPVEDTASDLTKPGWK*ADYKKL
Trigger: AAGCTTTTTATAGTCAGCTCACTTCCATCCTGGCTT...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp AAATTGAGGCATAAAGAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGTGTATTGGCGTGAGCTGCTaGAAAACACTTCGGCTATTT +
Preference number: 4 (lower is better)
Translates to: KLRHKEFKWFPLGHTTVCIGVSC*KTLRLF
Trigger: AAATAGCCGAAGTGTTTTGCAGCAGCTCACGCCAAT...ACACACAGTTGTGTGACCTAAGGGAAACCACTTAAACTCTTTATGCCTCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR GCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTTTCATTGGCGTGAGCTaGTGCAAAACACTTCGGCTA +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPFIGVS*CKTLRL
Trigger: TAGCCGAAGTGTTTTGCAGCAGCTCACGCCAATGAA...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAACTGAAAACAGCAGGGTaGATTCAGCACCTCTTCATA +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHELKTAG*IQHLFI
Trigger: TATGAAGAGGTGCTGAATGCACCCTGCTGTTTTCAG...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCTGTTATAAGAGTGTCTaGCCATGTGGAATCATATAT +
Preference number: 4 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCACYKSV*PCGIIY
Trigger: ATATATGATTCCACATGGGCAGACACTCTTATAACA...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATAGACCCTCATAAAGAATaGAAACACAGGGGTCTTATC +
Preference number: 4 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGIDPHKE*KHRGLI
Trigger: GATAAGACCCCTGTGTTTGCATTCTTTATGAGGGTC...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp GATATCAAATGGACCAGATATCACAGGGTGAACAAAATCTCCTTAAACAGAAGGGGTATTCTTCCTGTTTaGAGTCTTGGCTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: DIKWTRYHRVNKISLNRRGILPV*SLGFIR
Trigger: CCTGATGAAGCCAAGACTGCAAACAGGAAGAATACC...CCTTCTGTTTAAGGAGATTTTGTTCACCCTGTGATATCTGGTCCATTTGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTCTCTGTTTTATTCATTaGCGTGAGCTGCTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFLCFIH*RELLQN
Trigger: GTTTTGCAGCAGCTCACGCCAATGAATAAAACAGAG...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTATGCATGGGCAAGGGTaGTTTCCTTCCAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPMHGQG*FPSRRC
Trigger: ACATCTTCTGGAAGGAAACCACCCTTGCCCATGCAT...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACATGCTGCTTGAACTTCTaGAAGAGCTTTCTGACTGGG +
Preference number: 4 (lower is better)
Translates to: SINVRGHEKDIILTMKATCCLNF*KSFLTG
Trigger: CCCAGTCAGAAAGCTCTTCCAGAAGTTCAAGCAGCA...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCAATCATCATCTTCTTTaGCAGGCCAGAATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILNHHLL*QARIQL
Trigger: CAGCTGGATTCTGGCCTGCCAAAGAAGATGATGATT...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATATCTAGTGGCTTTGGTTaGGAATACTGGGAGATAGAA +
Preference number: 4 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGISSGFG*EYWEIE
Trigger: TTCTATCTCCCAGTATTCCCAACCAAAGCCACTAGA...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTGGAAAATTCCACTGTTaGGACAGGGCACCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPGKFHC*DRAPFA
Trigger: AGCAAAAGGTGCCCTGTCCCAACAGTGGAATTTTCC...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCTTTGGATGGTGTCAGTaGGGTCCTTCACAGTCATTA +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILFGWCQ*GPSQSL
Trigger: TAATGACTGTGAAGGACCCCACTGACACCATCCAAA...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCTCTGACCAAAAGCTTTaGATAGAGGGAAGTGGTTAC +
Preference number: 4 (lower is better)
Translates to: TFAILLQPPVEDTASDLTSDQKL*IEGSGY
Trigger: GTAACCACTTCCCTCTATCCAAAGCTTTTGGTCAGA...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp TATGTTTTTAATCATCATCTTCTTTGGCAGGCCAGAATCCAGCTGGACATGCAACCCACGAAAGTCGTGTaGAAATTTAAAACGATGTCA +
Preference number: 4 (lower is better)
Translates to: YVFNHHLLWQARIQLDMQPTKVV*KFKTMS
Trigger: TGACATCGTTTTAAATTTTCACACGACTTTCGTGGG...TTGCATGTCCAGCTGGATTCTGGCCTGCCAAAGAAGATGATGATTAAAAACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTTGGCAGGTTGGACCCTaGTTCTTCAAATATTACATT +
Preference number: 4 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFWQVGP*FFKYYI
Trigger: AATGTAATATTTGAAGAATCAGGGTCCAACCTGCCA...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATAGAGAACAGAGATGGCTaGAAAGACACTATGATAACT +
Preference number: 4 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGIENRDG*KDTMIT
Trigger: AGTTATCATAGTGTCTTTTCAGCCATCTCTGTTCTC...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAATTCAACCACTGTGCCTaGACCATTTTCAGTACCATT +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHEFNHCA*TIFSTI
Trigger: AATGGTACTGAAAATGGTTCAGGCACAGTGGTTGAA...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTGTGATTCCGCATGAATaGGAGAGAGTGATCAGATCT +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPVIPHE*ERVIRS
Trigger: AGATCTGATCACTCTCTCTCATTCATGCGGAATCAC...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCACTCAATGGAGAGTCTaGCCAAAAGCTTTGGATAGA +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILTQWRV*PKALDR
Trigger: TCTATCCAAAGCTTTTGGTCAGACTCTCCATTGAGT...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp AGAACATTTTACGAGCTAGGACCTATTATTCTCTACTGTAGGACACAGGTCATAGAAAACTCGGATAGATaGATGGGTGAAGTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RTFYELGPIILYCRTQVIENSDR*MGEVGS
Trigger: ACTTCCTACTTCACCCATTCATCTATCCGAGTTTTC...TATGACCTGTGTCCTACAGTAGAGAATAATAGGTCCTAGCTCGTAAAATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR GCA 90 bp GCTCCCATATTATTCTTGAGTCGCAGCCACCCTTTTCCATTTCCATTCTTCATTCAGGCTATGTTGTTCTaGTTTGTTTTGAAGGAAACA +
Preference number: 4 (lower is better)
Translates to: APILFLSRSHPFPFPFFIQAMLF*FVLKET
Trigger: TGTTTCCTTCAAAACAAAGCAGAACAACATAGCCTG...AATGAAGAATGGAAATGGAAAAGGGTGGCTGCGACTCAAGAATAATATGGGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR GCA 90 bp TCATTTAAGTGTCATGGAATGAGAACATTTTACGAGCTAGGACCTATTATTCTCCGTACAATGAATCCTTaGTGGGTCCTCCTTCCCATA +
Preference number: 4 (lower is better)
Translates to: SFKCHGMRTFYELGPIILRTMNP*WVLLPI
Trigger: TATGGGAAGGAGGACCCAGCAAGGATTCATTGTACG...GAGAATAATAGGTCCTAGCTCGTAAAATGTTCTCATTCCATGACACTTAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR GCA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCAAAATTTCTGCCACCTaGTTTTCTAGGGCAGTCATT +
Preference number: 4 (lower is better)
Translates to: TFAILLQPPVEDTASDLTKISAT*FSRAVI
Trigger: AATGACTGCCCTAGAAAAGCAGGTGGCAGAAATTTT...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAAGGACAGGGCACCTTTTaGTTAAGACAGTATGATTTC +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHEGQGTF*LRQYDF
Trigger: GAAATCATACTGTCTTAAGCAAAAGGTGCCCTGTCC...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTTTAAAAGGAAGCAACTaGTGTCCCTTCTCCACACTC +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPLKGSN*CPFSTL
Trigger: GAGTGTGGAGAAGGGACAGCAGTTGCTTCCTTTTAA...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp AAATTGAGGCATAAAGAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGTGTCTCTGTTTTATTCATTaGCGTGAGCTGCTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: KLRHKEFKWFPLGHTTVCLCFIH*RELLQN
Trigger: GTTTTGCAGCAGCTCACGCCAATGAATAAAACAGAG...ACACACAGTTGTGTGACCTAAGGGAAACCACTTAAACTCTTTATGCCTCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAAGGTATCGGTTGGTGTTaGCATACATTTGCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHEGIGWC*HTFAGK
Trigger: TTTTCCAGCAAATGTATGCCAACACCAACCGATACC...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAAGCAACATTGGCAGGTTaGACCCTGATTCTTCAAATA +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHEATLAG*TLILQI
Trigger: TATTTGAAGAATCAGGGTCCAACCTGCCAATGTTGC...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTAGATCAAATTTGTCATaGCAACATTGGCAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFRSNLS*QHWQVG
Trigger: TCCAACCTGCCAATGTTGCCATGACAAATTTGATCT...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp AAGACTAAAATTCAGTCTTTAGTATCCCCCTTTCACAAATGGACCTGCCTGAGCAAGATTTGTGGAATCTaGGAACCTAAAAGACTACTC +
Preference number: 4 (lower is better)
Translates to: KTKIQSLVSPFHKWTCLSKICGI*EPKRLL
Trigger: GAGTAGTCTTTTAGGTTCCCAGATTCCACAAATCTT...GCTCAGGCAGGTCCATTTGTGAAAGGGGGATACTAAAGACTGAATTTTAGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATACAAGTGAAAACAAGATaGTTTGGGCTGAAGATTCCA +
Preference number: 4 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGIQVKTR*FGLKIP
Trigger: TGGAATCTTCAGCCCAAACCATCTTGTTTTCACTTG...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCATAAAAAGCTTTGGATaGTGTCAGTGGGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILIKSFG*CQWGPS
Trigger: TGAAGGACCCCACTGACACCATCCAAAGCTTTTTAT...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAATCCTGTTTGCAGTCTTaGCTTCATCAGGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHESCLQS*LHQESF
Trigger: GAAAGATTCCTGATGAAGCCAAGACTGCAAACAGGA...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp CTCCTCAAGGTAACTTTTATACTTTCTCCTGGACTCCGTGAAAACTCGGATAGACATAAAGAGTTTAAGTaGTTTCCCTTAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: LLKVTFILSPGLRENSDRHKEFK*FPLGHT
Trigger: TGTGTGACCTAAGGGAAACCACTTAAACTCTTTATG...TCTATCCGAGTTTTCACGGAGTCCAGGAGAAAGTATAAAAGTTACCTTGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR TCA 90 bp TCATTTAAGTGTCATGGAATGAGAACATTTTACGAGCTAGGACCTATTATTCTCACCTTCCGGTTTAGATaGACACAGATATCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SFKCHGMRTFYELGPIILTFRFR*TQISAL
Trigger: GAGAGCTGATATCTGTGTTCATCTAAACCGGAAGGT...GAGAATAATAGGTCCTAGCTCGTAAAATGTTCTCATTCCATGACACTTAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR TCA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACAAAGAGTGAGATTCCTTaGGAAGGAGTTTGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: SINVRGHEKDIILTMKATKSEIP*EGVCKS
Trigger: GCTTTTGCAAACTCCTTCTCAAGGAATCTCACTCTT...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAATATACATACTCAGCCTaGGATCAAATTTGTCATGGC +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHEYTYSA*DQICHG
Trigger: GCCATGACAAATTTGATCTCAGGCTGAGTATGTATA...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTTCCCACACTCTTATCTaGCTTAGGCAACTAAACAGT +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPSHTLI*LRQLNS
Trigger: ACTGTTTAGTTGCCTAAGTCAGATAAGAGTGTGGGA...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCAGAAAAGCAGTTATCTaGGTCGAGCAACTTAATGTC +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILRKAVI*VEQLNV
Trigger: GACATTAAGTTGCTCGACTCAGATAACTGCTTTTCT...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp TATGTTTTTAATCATCATCTTCTTTGGCAGGCCAGAATCCAGCTGGACATGCAACATCTTGTGGGCATGTaGAGTTCAATAGAAATTCTA +
Preference number: 4 (lower is better)
Translates to: YVFNHHLLWQARIQLDMQHLVGM*SSIEIL
Trigger: TAGAATTTCTATTGAACTTCACATGCCCACAAGATG...TTGCATGTCCAGCTGGATTCTGGCCTGCCAAAGAAGATGATGATTAAAAACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTCGAGGATACAGCATCTaGTCTTACCTATTAATAACA +
Preference number: 4 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFRGYSI*SYLLIT
Trigger: TGTTATTAATAGGTAAGATCAGATGCTGTATCCTCG...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp TATGTTTTTAATCATCATCTTCTTTGGCAGGCCAGAATCCAGCTGGACATGCAATCACTTGTCATAATGTaGTTTTCACCTGCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: YVFNHHLLWQARIQLDMQSLVIM*FSPARK
Trigger: CTTTCTTGCAGGTGAAAATCACATTATGACAAGTGA...TTGCATGTCCAGCTGGATTCTGGCCTGCCAAAGAAGATGATGATTAAAAACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCCTCTCCATTAACCTCTaGCCAGATAAATCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILLSINL*PDKSLL
Trigger: TAGAAGAGATTTATCTGGTCAGAGGTTAATGGAGAG...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACAGGATTTTGTGTAAGTTaGCAGTTCATGGCTGTGACA +
Preference number: 4 (lower is better)
Translates to: SINVRGHEKDIILTMKATGFCVS*QFMAVT
Trigger: TGTCACAGCCATGAACTGTCAACTTACACAAAATCC...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCATAAGAATAGCAATGTaGAAACATCCCTGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILIRIAM*KHPCRG
Trigger: ACCTCTGCAGGGATGTTTTCACATTGCTATTCTTAT...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp TATGTTTTTAATCATCATCTTCTTTGGCAGGCCAGAATCCAGCTGGACATGCAAAATCTGTTCCTAATATaGAATGCATATTCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: YVFNHHLLWQARIQLDMQNLFLI*NAYSPL
Trigger: CAAGGGGGAATATGCATTTCATATTAGGAACAGATT...TTGCATGTCCAGCTGGATTCTGGCCTGCCAAAGAAGATGATGATTAAAAACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp AGCAAATTGAGGCATAAAGAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGCAGGCTATGTTGTTCTaGTTTGTTTTGAAGGAAACA +
Preference number: 4 (lower is better)
Translates to: SKLRHKEFKWFPLGHTTVQAMLF*FVLKET
Trigger: TGTTTCCTTCAAAACAAAGCAGAACAACATAGCCTG...CACAGTTGTGTGACCTAAGGGAAACCACTTAAACTCTTTATGCCTCAATTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR GCA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATACCTTATACCCTGTGGTaGAGTGTTTCTATAATAACA +
Preference number: 4 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGIPYTLW*SVSIIT
Trigger: TGTTATTATAGAAACACTGCACCACAGGGTATAAGG...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp GATATCAAATGGACCAGATATCACAGGGTGAACAAAATCTCCTTAAACAGAAGGTCAATTCAACCACTGTaGCTGAACCATTTTCAGTAC +
Preference number: 4 (lower is better)
Translates to: DIKWTRYHRVNKISLNRRSIQPL*LNHFQY
Trigger: GTACTGAAAATGGTTCAGGCACAGTGGTTGAATTGA...CCTTCTGTTTAAGGAGATTTTGTTCACCCTGTGATATCTGGTCCATTTGATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp AGCAAATTGAGGCATAAAGAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGCAATGCCTTTTGACATaGACCATGTTGAGACAATAT +
Preference number: 4 (lower is better)
Translates to: SKLRHKEFKWFPLGHTTVQCLLT*TMLRQY
Trigger: ATATTGTCTCAACATGGTCCATGTCAAAAGGCATTG...CACAGTTGTGTGACCTAAGGGAAACCACTTAAACTCTTTATGCCTCAATTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAATCCTTTTTCTCCTCATaGGCTCCCATATTATTCTTG +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHESFFSS*APILFL
Trigger: CAAGAATAATATGGGAGCCCATGAGGAGAAAAAGGA...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAAAGGCCAGAATCCAGCTaGACATGCAATATTTACATA +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHERPESS*TCNIYI
Trigger: TATGTAAATATTGCATGTCCAGCTGGATTCTGGCCT...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTGGAAAATGGAGCCCATaGCTCATATGTTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPGKWSP*LICFET
Trigger: AGTCTCAAAACATATGAGCCATGGGCTCCATTTTCC...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CAA 72 bp TTCCTCAGTTATAACTCTGGTCATAAGCTGCACTTTTaGGTTTACTCTTCTTTGACCAAGTGCCTTTACAAG +
Preference number: 4 (lower is better)
Translates to: FLSYNSGHKLHF*VYSSLTKCLYK
Trigger: CTTGTAAAGGCACTTGGTCAAAGAAGAGTAAACCAAAAAGTGCAGCTTATGACCAGAGTTATAACTGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAAAGTGCAACAATATCCTaGTACAGACTGATAAAACCT +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHESATIS*YRLIKP
Trigger: AGGTTTTATCAGTCTGTATCAGGATATTGTTGCACT...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTTGGTTTACTCTTCTTTaGCCAAGTGCCTTTACAAGT +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPWFTLL*PSAFTS
Trigger: ACTTGTAAAGGCACTTGGTCAAAGAAGAGTAAACCA...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR TCA 90 bp GATATCAAATGGACCAGATATCACAGGGTGAACAAAATCTCCTTAAACAGAAGGTACAGTTTATTGTGCTaGAACCCAGATTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: DIKWTRYHRVNKISLNRRYSLLC*NPDFFW
Trigger: CCAAAAGAAATCTGGGTTTCAGCACAATAAACTGTA...CCTTCTGTTTAAGGAGATTTTGTTCACCCTGTGATATCTGGTCCATTTGATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAACAGGCTATGTTGTTCTaGTTTGTTTTGAAGGAAACA +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHEQAMLF*FVLKET
Trigger: TGTTTCCTTCAAAACAAAGCAGAACAACATAGCCTG...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATAGTGCATGCAGTCAACTaGATAATATACAAGCAATAT +
Preference number: 4 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGIVHAVN*IIYKQY
Trigger: ATATTGCTTGTATATTATGCAGTTGACTGCATGCAC...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCTCTTTTCTCAACCCTTaGCTTCATCATCTTTCTAGT +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILSFLNP*LHHLSS
Trigger: ACTAGAAAGATGATGAAGGCAAGGGTTGAGAAAAGA...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp TATGTTTTTAATCATCATCTTCTTTGGCAGGCCAGAATCCAGCTGGACATGCAAGACAAGCTTTCAAACTaGTTCCAAAGGTTTTTGTTA +
Preference number: 4 (lower is better)
Translates to: YVFNHHLLWQARIQLDMQDKLSN*FQRFLL
Trigger: TAACAAAAACCTTTGGAAGCAGTTTGAAAGCTTGTC...TTGCATGTCCAGCTGGATTCTGGCCTGCCAAAGAAGATGATGATTAAAAACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp TCATTTAAGTGTCATGGAATGAGAACATTTTACGAGCTAGGACCTATTATTCTCGGTATCGGTTGGTGTTaGCATACATTTGCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: SFKCHGMRTFYELGPIILGIGWC*HTFAGK
Trigger: TTTTCCAGCAAATGTATGCCAACACCAACCGATACC...GAGAATAATAGGTCCTAGCTCGTAAAATGTTCTCATTCCATGACACTTAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CCA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTATTCTTCATTCTTATTaGGCTGTTGACTTTGAGACA +
Preference number: 4 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFILHSY*AVDFET
Trigger: TGTCTCAAAGTCAACAGCCCAATAAGAATGAAGAAT...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCAAACATGCAGTTATCTaGTCCTCAAAAGAGCATCTA +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILKHAVI*SSKEHL
Trigger: TAGATGCTCTTTTGAGGACCAGATAACTGCATGTTT...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCATAGAGAGTACATCGTaGATACTCTTCTATGAAAGA +
Preference number: 4 (lower is better)
Translates to: TFAILLQPPVEDTASDLTIESTS*ILFYER
Trigger: TCTTTCATAGAAGAGTATCCACGATGTACTCTCTAT...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAATATTTAATAGTGGTTTaGCCAAGAAGCCAACATCAG +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHEYLIVV*PRSQHQ
Trigger: CTGATGTTGGCTTCTTGGCCAAACCACTATTAAATA...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAATTTCCCGCTATAATTTaGTTGAAAAAGTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHEFPAII*LKKLRS
Trigger: GCTCCTCAACTTTTTCAACCAAATTATAGCGGGAAA...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CAA 72 bp GAAATGGTACCATTTGGTACACTAGGAAAGGTTAACTaGCCCATAATTACACTTCTAGTTTGTGGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: EMVPFGTLGKVN*PIITLLVCGKA
Trigger: AGCTTTACCACAAACTAGAAGTGTAATTATGGGCAAGTTAACCTTTCCTAGTGTACCAAATGGTACCATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
3UTR CAA 72 bp GTTGATACCAGTGACCATATATCAAACATACCACATTaGACAGTTTACTTTGGCCGATGTCTTTCAACTGTT +
Preference number: 4 (lower is better)
Translates to: VDTSDHISNIPH*TVYFGRCLSTV
Trigger: AACAGTTGAAAGACATCGGCCAAAGTAAACTGTCAAATGTGGTATGTTTGATATATGGTCACTGGTATCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCTGTAGGAATAAAACATaGAGTTATCTGGTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILCRNKT*SYLVLK
Trigger: TTTGAGGACCAGATAACTGCATGTTTTATTCCTACA...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTACTCTGGTCATAAGCTaGACTTTTTGGTTTACTCTT +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPTLVIS*TFWFTL
Trigger: AAGAGTAAACCAAAAAGTGCAGCTTATGACCAGAGT...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTTATTTTGGCTTTGACTaGTTTGGTCATTCAACAGTC +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPYFGFD*FGHSTV
Trigger: GACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATA...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAAGTTCCTAATATGAAATaGATATTCCCCCTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: NILALTALVIQQSVIPHEVPNMK*IFPLAL
Trigger: TAAAGCAAGGGGGAATATGCATTTCATATTAGGAAC...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp TCATTTAAGTGTCATGGAATGAGAACATTTTACGAGCTAGGACCTATTATTCTCAGCCAACTGTCTATTTaGATGGTGTTAGTGACTTCA +
Preference number: 4 (lower is better)
Translates to: SFKCHGMRTFYELGPIILSQLSI*MVLVTS
Trigger: TGAAGTCACTAACACCATCCAAATAGACAGTTGGCT...GAGAATAATAGGTCCTAGCTCGTAAAATGTTCTCATTCCATGACACTTAAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTTTCTTAGTGGGTTTTTaGTCACACTGTTCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPFLVGF*SHCSLN
Trigger: ATTCAGAGAACAGTGTGACCAAAAACCCACTAAGAA...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTTTTGGTTGGGAATACTaGGAGATAGAAAAGCTCATA +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPFGWEY*EIEKLI
Trigger: TATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAA...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACAATAAAGAAAGGAAAATaGAGCCCATGGCTCATATGT +
Preference number: 4 (lower is better)
Translates to: SINVRGHEKDIILTMKATIKKGK*SPWLIC
Trigger: ACATATGAGCCATGGGCTCCATTTTCCTTTCTTTAT...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTTCTAAACTCATTGGTTaGTGGGAGAACACTTATTTC +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPSKLIG*WENTYF
Trigger: GAAATAAGTGTTCTCCCACCAACCAATGAGTTTAGA...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCTATGGATACTCAATCTaGTTTATTGAAGCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILYGYSI*FIEASR
Trigger: CCTTGAAGCTTCAATAAACCAGATTGAGTATCCATA...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACAAATTTCACAAATATCTaGCACTGCACACTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: SINVRGHEKDIILTMKATNFTNI*HCTLQN
Trigger: GTTTTGAAGTGTGCAGTGGCAGATATTTGTGAAATT...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACAAAGTATGAAGTTTTATaGTTACCTGCCACTAGCAAA +
Preference number: 4 (lower is better)
Translates to: SINVRGHEKDIILTMKATKYEVL*LPATSK
Trigger: TTTGCTAGTGGCAGGTAAGCATAAAACTTCATACTT...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR GCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTTTATCTCAAGACACTTaGTTTAGAAATCTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPLSQDT*FRNLKG
Trigger: CCCTTTGAGATTTCTAAAGCAAGTGTCTTGAGATAA...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTAGAAATAAGTTCTCCTaGGTTCTTACAAGTGAATGT +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPRNKFS*VLTSEC
Trigger: ACATTCACTTGTAAGAACCCAGGAGAACTTATTTCT...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CCA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTTGTTTTCTTATTTATTaGCGGGGAAATGGTACCATT +
Preference number: 4 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPCFLIY*RGNGTI
Trigger: AATGGTACCATTTCCCCGCCAATAAATAAGAAAACA...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS GCA 90 bp CGATGTTCTCCAAAAATGTGTTCTGCGGTGCCACCAGCCCTCTCTTaGCCCCCGGCATCCTGGGTCTGGAGAGCAGCGGCCAGGATCCGC +
Preference number: 5 (lower is better)
Translates to: RCSPKMCSAVPPALS*PPASWVWRAAARIR
Trigger: GCGGATCCTGGCCGCTGCTCTCCAGACCCAGGATGCCGGGGGGCAAGAGAGGGCTGGTGGCACCGCAGAACACATTTTTGGAGAACATCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp GTAATCTGTGACACAGTCACCACGCTGGTTCCGGTGATGGAGGCTCCATTCTGTGCACCGCCGTTGGGCTaGAGTTCCATGGCATCACGG +
Preference number: 5 (lower is better)
Translates to: VICDTVTTLVPVMEAPFCAPPLG*SSMASR
Trigger: CCGTGATGCCATGGAACTCAAGCCCAACGGCGGTGC...ACAGAATGGAGCCTCCATCACCGGAACCAGCGTGGTGACTGTGTCACAGATTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp AATGCTGAGGGTCACCTCATTCTTCTGCCGGAGGCGCTCCTCCTCCTCTTTCTTTGGTCAGCACCGCCGTaGGGCTTGAGTTCCATGGCA +
Preference number: 5 (lower is better)
Translates to: NAEGHLILLPEALLLLFLWSAPP*GLSSMA
Trigger: TGCCATGGAACTCAAGCCCAACGGCGGTGCTGACCA...AAGAAAGAGGAGGAGGAGCGCCTCCGGCAGAAGAATGAGGTGACCCTCAGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp TCCACGGGAATGCTGAGGGTCACCTCATTCTTCTGCCGGAGGCGCTCCTCCTCCTCCATGGCATCACGGTaGTTCTGCTTAAGGGATTCA +
Preference number: 5 (lower is better)
Translates to: STGMLRVTSFFCRRRSSSSMASR*FCLRDS
Trigger: TGAATCCCTTAAGCAGAACAACCGTGATGCCATGGA...GGAGGAGGAGCGCCTCCGGCAGAAGAATGAGGTGACCCTCAGCATTCCCGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp TGCTTGGCATCAGCCTGGATGGGACTGTGCTCTAGCGGACTTCGGGCCTCCCCAGCTCCCATATTATTCTaGAGTCGCAGCCACCCTTTT +
Preference number: 5 (lower is better)
Translates to: CLASAWMGLCSSGLRASPAPILF*SRSHPF
Trigger: AAAAGGGTGGCTGCGACTCAAGAATAATATGGGAGC...TGGGGAGGCCCGAAGTCCGCTAGAGCACAGTCCCATCCAGGCTGATGCCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp ATTGGGCTGTTGACTTTGAGACATTTTTGGTCAGCACCGCCGTTGGGCTTGAGTCAGGGTCACCCTGTGTaGAGCCCTGATTCCGCAGCT +
Preference number: 5 (lower is better)
Translates to: IGLLTLRHFWSAPPLGLSQGHPV*SPDSAA
Trigger: AGCTGCGGAATCAGGGCTCAACACAGGGTGACCCTG...ACTCAAGCCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGTCAACAGCCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS CCA 90 bp GCTGGGTCCTCCTTCCCATATCCCAGCACTGGTATTGTAGCGATATaGAGTCCCAATGCTCAAAGCCAGCTGGTAGAGCCAACTGTCTAT +
Preference number: 5 (lower is better)
Translates to: AGSSFPYPSTGIVAI*SPNAQSQLVEPTVY
Trigger: ATAGACAGTTGGCTCTACCAGCTGGCTTTGAGCATTGGGACTCCATATCGCTACAATACCAGTGCTGGGATATGGGAAGGAGGACCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322893.12
ENST00000394964.3
ENST00000394968.2
ENST00000420622.6
CDS-3UTR CAA 90 bp TGCTTGGCATCAGCCTGGATGGGACTGTGCTCTAGCGGACTTCGGGCCTCCCCAAACAACGTAATATCCTaGAAAGTACACAGGAACAAG +
Preference number: 5 (lower is better)
Translates to: CLASAWMGLCSSGLRASPNNVIS*KVHRNK
Trigger: CTTGTTCCTGTGTACTTTCAAGGATATTACGTTGTT...TGGGGAGGCCCGAAGTCCGCTAGAGCACAGTCCCATCCAGGCTGATGCCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp TCTGACTGGGTGGTCCACGGGAATGCTGAGGGTCACCTCATTCTTCTGCCGGAGTCGTCCAACCTTTTGTaGAATCATCCTCTATTGGCT +
Preference number: 5 (lower is better)
Translates to: SDWVVHGNAEGHLILLPESSNLL*NHPLLA
Trigger: AGCCAATAGAGGATGATTCAACAAAAGGTTGGACGA...CTCCGGCAGAAGAATGAGGTGACCCTCAGCATTCCCGTGGACCACCCAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp TGGGCTGTTGACTTTGAGACATTTTTGGTCAGCACCGCCGTTGGGCTTGAGTTCGACTTTGAGACATTTTaGGTCAGCACCGCCGTTGGG +
Preference number: 5 (lower is better)
Translates to: WAVDFETFLVSTAVGLEFDFETF*VSTAVG
Trigger: CCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGTC...GAACTCAAGCCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGTCAACAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS CCA 90 bp CGTACAATGAATCCTTGCTGGGTCCTCCTTCCCATATCCCAGCACTaGTATTGTAGCGATATGGAGTCCCAATGCTCAAAGCCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: RTMNPCWVLLPISQH*YCSDMESQCSKPAG
Trigger: ACCAGCTGGCTTTGAGCATTGGGACTCCATATCGCTACAATACCAGTGCTGGGATATGGGAAGGAGGACCCAGCAAGGATTCATTGTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322893.12
ENST00000394964.3
ENST00000394968.2
ENST00000420622.6
CDS-3UTR CAA 90 bp ACTTCGGGCCTCCCCAGCCTTATCCAAACGAAGGTCACTTTTTGTAATTCCACTTCAGCTCTCATGTCCTaGGGACAGATGGAGAGGACC +
Preference number: 5 (lower is better)
Translates to: TSGLPSLIQTKVTFCNSTSALMS*GQMERT
Trigger: GGTCCTCTCCATCTGTCCCAAGGACATGAGAGCTGA...AGTGGAATTACAAAAAGTGACCTTCGTTTGGATAAGGCTGGGGAGGCCCGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp CCAAGGGGTCAGATTCCAAACAGTCTTAACCATTCCACTCTCCTGCTCCTCAAGAGCAAGGCTTCCCGCTaGATGATGTGTAGGTCACAG +
Preference number: 5 (lower is better)
Translates to: PRGQIPNSLNHSTLLLLKSKASR*MMCRSQ
Trigger: CTGTGACCTACACATCATCAAGCGGGAAGCCTTGCT...CTTGAGGAGCAGGAGAGTGGAATGGTTAAGACTGTTTGGAATCTGACCCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp GAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGTGTCCAGGATGCAAATCCCCCTTCACAGAGCGTTaGCCATGGAGAACCATCCCC +
Preference number: 5 (lower is better)
Translates to: EFKWFPLGHTTVCPGCKSPFTER*PWRTIP
Trigger: GGGGATGGTTCTCCATGGCAAACGCTCTGTGAAGGG...GGATTTGCATCCTGGACACACAGTTGTGTGACCTAAGGGAAACCACTTAAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCTCAGCTCTCATGTCCTaGGGACAGATGGAGAGGACC +
Preference number: 5 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCASALMS*GQMERT
Trigger: GGTCCTCTCCATCTGTCCCAAGGACATGAGAGCTGA...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp GCAAATCCAAGGGGTCAGATTCCAAACAGTCTTAACCATTCCACTCTCCTGCTCAGCACAGTGAATGGTTaGGAACTCTACCGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: ANPRGQIPNSLNHSTLLLSTVNG*ELYRQG
Trigger: GCCTTGGCGGTAGAGTTCCAAACCATTCACTGTGCT...GAGCAGGAGAGTGGAATGGTTAAGACTGTTTGGAATCTGACCCCTTGGATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATAGCACCGCCGTTGGGCTaGAGTTCCATGGCATCACGG +
Preference number: 5 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGIAPPLG*SSMASR
Trigger: CCGTGATGCCATGGAACTCAAGCCCAACGGCGGTGC...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp CCGTTGGGCTTGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGGGATTCACTGAGCTGGATGTCCTCTTaGAGTTCGTGTTTGACTTCC +
Preference number: 5 (lower is better)
Translates to: PLGLSSMASRLFCLRDSLSWMSS*SSCLTS
Trigger: GGAAGTCAAACACGAACTCAAAGAGGACATCCAGCT...CAGTGAATCCCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCCCAACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp TTTTTCTCCTCATGGGCTCCCATATTATTCTTGAGTCGCAGCCACCCTTTTCCAAGTGGCATTTGGGATTaGGGAGATGAGGCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: FFSSWAPILFLSRSHPFPSGIWD*GDEAWG
Trigger: ACCCCAGGCCTCATCTCCCAAATCCCAAATGCCACT...TGGAAAAGGGTGGCTGCGACTCAAGAATAATATGGGAGCCCATGAGGAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS GCA 90 bp CTTCCCATATCCCAGCACTGGTATTGTAGCGATATGGAGTCCCAATaGTCAAAGCCAGCTGGTAGAGCCAACTGTCTATTTGGATGGTGT +
Preference number: 5 (lower is better)
Translates to: LPISQHWYCSDMESQ*SKPAGRANCLFGWC
Trigger: ACACCATCCAAATAGACAGTTGGCTCTACCAGCTGGCTTTGAGCATTGGGACTCCATATCGCTACAATACCAGTGCTGGGATATGGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322893.12
ENST00000394964.3
ENST00000394968.2
ENST00000420622.6
CDS-3UTR CAA 90 bp CCGTTGGGCTTGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGGGATTCACTGAAACACTTCGGCTATTaGTCAAAGCCCGTGTCAATC +
Preference number: 5 (lower is better)
Translates to: PLGLSSMASRLFCLRDSLKHFGY*SKPVSI
Trigger: GATTGACACGGGCTTTGACAAATAGCCGAAGTGTTT...CAGTGAATCCCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCCCAACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp CTTCGGGCCTCCCCAGCCTTATCCAAACGAAGGTCACTTTTTGTAATTCCACTGTGTGTGGTGGCGTCTTaGGCGCTTCTTGTTTATACT +
Preference number: 5 (lower is better)
Translates to: LRASPALSKRRSLFVIPLCVVAS*ALLVYT
Trigger: AGTATAAACAAGAAGCGCCAAAGACGCCACCACACA...CAGTGGAATTACAAAAAGTGACCTTCGTTTGGATAAGGCTGGGGAGGCCCGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp TGGTCACACTGTTCTCTGAATCACTGCTCTTGGGGTCCTCAGACAATAGCCCCAGAGCCAACTGTCTATTaGGATGGTGTTAGTGACTTC +
Preference number: 5 (lower is better)
Translates to: WSHCSLNHCSWGPQTIAPEPTVY*DGVSDF
Trigger: GAAGTCACTAACACCATCCAAATAGACAGTTGGCTC...TGGGGCTATTGTCTGAGGACCCCAAGAGCAGTGATTCAGAGAACAGTGTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp ACTTCGGGCCTCCCCAGCCTTATCCAAACGAAGGTCACTTTTTGTAATTCCACTACGTACAATGAATCCTaGCTGGGTCCTCCTTCCCAT +
Preference number: 5 (lower is better)
Translates to: TSGLPSLIQTKVTFCNSTTYNES*LGPPSH
Trigger: ATGGGAAGGAGGACCCAGCAAGGATTCATTGTACGT...AGTGGAATTACAAAAAGTGACCTTCGTTTGGATAAGGCTGGGGAGGCCCGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp TTCTTAGTGGGTTTTTGGTCACACTGTTCTCTGAATCACTGCTCTTGGGGTCCTAGCACAGTGAATGGTTaGGAACTCTACCGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: FLVGFWSHCSLNHCSWGPSTVNG*ELYRQG
Trigger: GCCTTGGCGGTAGAGTTCCAAACCATTCACTGTGCT...AGGACCCCAAGAGCAGTGATTCAGAGAACAGTGTGACCAAAAACCCACTAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCCAGGGTCACCCTGTGTaGAGCCCTGATTCCGCAGCT +
Preference number: 5 (lower is better)
Translates to: TFAILLQPPVEDTASDLTQGHPV*SPDSAA
Trigger: AGCTGCGGAATCAGGGCTCAACACAGGGTGACCCTG...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp GAATCACTGCTCTTGGGGTCCTCAGACAATAGCCCCATTGACTCAGCTTTAGTGTCTTTGAGTTCGTGTTaGACTTCCTGCAGTGTGGTC +
Preference number: 5 (lower is better)
Translates to: ESLLLGSSDNSPIDSALVSLSSC*TSCSVV
Trigger: GACCACACTGCAGGAAGTCAAACACGAACTCAAAGA...CACTAAAGCTGAGTCAATGGGGCTATTGTCTGAGGACCCCAAGAGCAGTGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS TCA 90 bp GGTTGTAAGGCTTGTCATGGTAAAGTAGAGAGAGGACACGTACAATaGATCCTTGCTGGGTCCTCCTTCCCATATCCCAGCACTGGTATT +
Preference number: 5 (lower is better)
Translates to: GCKACHGKVERGHVQ*ILAGSSFPYPSTGI
Trigger: AATACCAGTGCTGGGATATGGGAAGGAGGACCCAGCAAGGATTCATTGTACGTGTCCTCTCTCTACTTTACCATGACAAGCCTTACAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322893.12
ENST00000394964.3
ENST00000394968.2
ENST00000420622.6
CDS-3UTR CAA 90 bp TGGGCTGTTGACTTTGAGACATTTTTGGTCAGCACCGCCGTTGGGCTTGAGTTCGAACTTCAGCTAGTCTaGAATGTTTATGGACCACCT +
Preference number: 5 (lower is better)
Translates to: WAVDFETFLVSTAVGLEFELQLV*NVYGPP
Trigger: AGGTGGTCCATAAACATTCAAGACTAGCTGAAGTTC...GAACTCAAGCCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGTCAACAGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp CCAAGGGGTCAGATTCCAAACAGTCTTAACCATTCCACTCTCCTGCTCCTCAAGCGTCTTTGGCGCTTCTaGTTTATACTGAGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: PRGQIPNSLNHSTLLLLKRLWRF*FILRKD
Trigger: ATCCTTCCTCAGTATAAACAAGAAGCGCCAAAGACG...CTTGAGGAGCAGGAGAGTGGAATGGTTAAGACTGTTTGGAATCTGACCCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCACGTACAATGAATCCTaGCTGGGTCCTCCTTCCCAT +
Preference number: 5 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCATYNES*LGPPSH
Trigger: ATGGGAAGGAGGACCCAGCAAGGATTCATTGTACGT...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp CTCCTCAAGGTAACTTTTATACTTTCTCCTGGACTCCGTGAAAACTCGGATAGATCAGCTCTCATGTCCTaGGGACAGATGGAGAGGACC +
Preference number: 5 (lower is better)
Translates to: LLKVTFILSPGLRENSDRSALMS*GQMERT
Trigger: GGTCCTCTCCATCTGTCCCAAGGACATGAGAGCTGA...TCTATCCGAGTTTTCACGGAGTCCAGGAGAAAGTATAAAAGTTACCTTGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCGCTCTCTACCTGGAGTaGGTTCCTCTCAGGGTCACC +
Preference number: 5 (lower is better)
Translates to: TFAILLQPPVEDTASDLTALYLE*VPLRVT
Trigger: GGTGACCCTGAGAGGAACCAACTCCAGGTAGAGAGC...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp CAACTTCATGCAAACACTAACTCCCCTGCTCCCCATATTAAATGCTGTGCATGCAGGAAAATTCCACTGTaGGGACAGGGCACCTTTTGC +
Preference number: 5 (lower is better)
Translates to: QLHANTNSPAPHIKCCACRKIPL*GQGTFC
Trigger: GCAAAAGGTGCCCTGTCCCAACAGTGGAATTTTCCT...GCATGCACAGCATTTAATATGGGGAGCAGGGGAGTTAGTGTTTGCATGAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS GCA 90 bp GAATGTTTATGGACCACCTCTGTTTTATTCATTGGCGTGAGCTGCTaGAAAACACTTCGGCTATTTGTCAAAGCCCGTGTCAATCGGGCA +
Preference number: 5 (lower is better)
Translates to: ECLWTTSVLFIGVSC*KTLRLFVKARVNRA
Trigger: TGCCCGATTGACACGGGCTTTGACAAATAGCCGAAGTGTTTTGCAGCAGCTCACGCCAATGAATAAAACAGAGGTGGTCCATAAACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322893.12
ENST00000394964.3
ENST00000394968.2
ENST00000420622.6
CDS-3UTR CAA 90 bp GTCACACTGTTCTCTGAATCACTGCTCTTGGGGTCCTCAGACAATAGCCCCATTTTCTCAATGGTCTTCTaGTCAGTCAATTCCCCATAC +
Preference number: 5 (lower is better)
Translates to: VTLFSESLLLGSSDNSPIFSMVF*SVNSPY
Trigger: GTATGGGGAATTGACTGACAAGAAGACCATTGAGAA...AATGGGGCTATTGTCTGAGGACCCCAAGAGCAGTGATTCAGAGAACAGTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp CCGTTGGGCTTGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGGGATTCACTGTCCTCTATTGGCTGTTaGAACAACGTAATATCCTTG +
Preference number: 5 (lower is better)
Translates to: PLGLSSMASRLFCLRDSLSSIGC*NNVISL
Trigger: CAAGGATATTACGTTGTTCAAACAGCCAATAGAGGA...CAGTGAATCCCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCCCAACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp AATCCAAGGGGTCAGATTCCAAACAGTCTTAACCATTCCACTCTCCTGCTCCTCAAACACTTCGGCTATTaGTCAAAGCCCGTGTCAATC +
Preference number: 5 (lower is better)
Translates to: NPRGQIPNSLNHSTLLLLKHFGY*SKPVSI
Trigger: GATTGACACGGGCTTTGACAAATAGCCGAAGTGTTT...GAGGAGCAGGAGAGTGGAATGGTTAAGACTGTTTGGAATCTGACCCCTTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp GGCTTGAGTTCCATGGCATCACGGTTGTTCTGCTTAAGGGATTCACTGGTTTTCCGTCTTTGGCGCTTCTaGTTTATACTGAGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: GLSSMASRLFCLRDSLVFRLWRF*FILRKD
Trigger: ATCCTTCCTCAGTATAAACAAGAAGCGCCAAAGACG...GAAAACCAGTGAATCCCTTAAGCAGAACAACCGTGATGCCATGGAACTCAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp GCAAATCCAAGGGGTCAGATTCCAAACAGTCTTAACCATTCCACTCTCCTGCTCTGGTATCGGTTGGTGTaGGCATACATTTGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: ANPRGQIPNSLNHSTLLLWYRLV*AYICWK
Trigger: TTTCCAGCAAATGTATGCCAACACCAACCGATACCA...GAGCAGGAGAGTGGAATGGTTAAGACTGTTTGGAATCTGACCCCTTGGATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTTGGTCAGCACCGCCGTaGGGCTTGAGTTCCATGGCA +
Preference number: 5 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPWSAPP*GLSSMA
Trigger: TGCCATGGAACTCAAGCCCAACGGCGGTGCTGACCA...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp GTCACACTGTTCTCTGAATCACTGCTCTTGGGGTCCTCAGACAATAGCCCCATTATTGGGCTGTTGACTTaGAGACATTTTTGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: VTLFSESLLLGSSDNSPIIGLLT*RHFWSA
Trigger: TGCTGACCAAAAATGTCTCAAAGTCAACAGCCCAAT...AATGGGGCTATTGTCTGAGGACCCCAAGAGCAGTGATTCAGAGAACAGTGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCGCTCCCATATTATTCTaGAGTCGCAGCCACCCTTTT +
Preference number: 5 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCAAPILF*SRSHPF
Trigger: AAAAGGGTGGCTGCGACTCAAGAATAATATGGGAGC...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS GCA 90 bp CTTGAATGTTTATGGACCACCTCTGTTTTATTCATTGGCGTGAGCTaGTGCAAAACACTTCGGCTATTTGTCAAAGCCCGTGTCAATCGG +
Preference number: 5 (lower is better)
Translates to: LECLWTTSVLFIGVS*CKTLRLFVKARVNR
Trigger: CCGATTGACACGGGCTTTGACAAATAGCCGAAGTGTTTTGCAGCAGCTCACGCCAATGAATAAAACAGAGGTGGTCCATAAACATTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322893.12
ENST00000394964.3
ENST00000394968.2
ENST00000420622.6
CDS-3UTR CAA 90 bp AATCCAAGGGGTCAGATTCCAAACAGTCTTAACCATTCCACTCTCCTGCTCCTCTTCTCAATGGTCTTCTaGTCAGTCAATTCCCCATAC +
Preference number: 5 (lower is better)
Translates to: NPRGQIPNSLNHSTLLLLFSMVF*SVNSPY
Trigger: GTATGGGGAATTGACTGACAAGAAGACCATTGAGAA...GAGGAGCAGGAGAGTGGAATGGTTAAGACTGTTTGGAATCTGACCCCTTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp GCAAATCCAAGGGGTCAGATTCCAAACAGTCTTAACCATTCCACTCTCCTGCTCTCGTCCAACCTTTTGTaGAATCATCCTCTATTGGCT +
Preference number: 5 (lower is better)
Translates to: ANPRGQIPNSLNHSTLLLSSNLL*NHPLLA
Trigger: AGCCAATAGAGGATGATTCAACAAAAGGTTGGACGA...GAGCAGGAGAGTGGAATGGTTAAGACTGTTTGGAATCTGACCCCTTGGATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp CAACTTCATGCAAACACTAACTCCCCTGCTCCCCATATTAAATGCTGTGCATGCTGGTATCGGTTGGTGTaGGCATACATTTGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: QLHANTNSPAPHIKCCACWYRLV*AYICWK
Trigger: TTTCCAGCAAATGTATGCCAACACCAACCGATACCA...GCATGCACAGCATTTAATATGGGGAGCAGGGGAGTTAGTGTTTGCATGAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp TTTTTCTCCTCATGGGCTCCCATATTATTCTTGAGTCGCAGCCACCCTTTTCCATGGTATCGGTTGGTGTaGGCATACATTTGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: FFSSWAPILFLSRSHPFPWYRLV*AYICWK
Trigger: TTTCCAGCAAATGTATGCCAACACCAACCGATACCA...TGGAAAAGGGTGGCTGCGACTCAAGAATAATATGGGAGCCCATGAGGAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTGACTTTGAGACATTTTaGGTCAGCACCGCCGTTGGG +
Preference number: 5 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFDFETF*VSTAVG
Trigger: CCCAACGGCGGTGCTGACCAAAAATGTCTCAAAGTC...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAAAGTGGCATTTGGGATTaGGGAGATGAGGCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: NILALTALVIQQSVIPHESGIWD*GDEAWG
Trigger: ACCCCAGGCCTCATCTCCCAAATCCCAAATGCCACT...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS TCA 90 bp CTAGTCTTGAATGTTTATGGACCACCTCTGTTTTATTCATTGGCGTaGGCTGCTGCAAAACACTTCGGCTATTTGTCAAAGCCCGTGTCA +
Preference number: 5 (lower is better)
Translates to: LVLNVYGPPLFYSLA*AAAKHFGYLSKPVS
Trigger: TGACACGGGCTTTGACAAATAGCCGAAGTGTTTTGCAGCAGCTCACGCCAATGAATAAAACAGAGGTGGTCCATAAACATTCAAGACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322893.12
ENST00000394964.3
ENST00000394968.2
ENST00000420622.6
CDS-3UTR CAA 90 bp GGTCACACAACTGTGTGTCCAGGATGCAAATCCAAGGGGTCAGATTCCAAACAGAACAACGTAATATCCTaGAAAGTACACAGGAACAAG +
Preference number: 5 (lower is better)
Translates to: GHTTVCPGCKSKGSDSKQNNVIS*KVHRNK
Trigger: CTTGTTCCTGTGTACTTTCAAGGATATTACGTTGTT...CTGTTTGGAATCTGACCCCTTGGATTTGCATCCTGGACACACAGTTGTGTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp CTTCGGGCCTCCCCAGCCTTATCCAAACGAAGGTCACTTTTTGTAATTCCACTGATTTCGTCCAACCTTTaGTTGAATCATCCTCTATTG +
Preference number: 5 (lower is better)
Translates to: LRASPALSKRRSLFVIPLISSNL*LNHPLL
Trigger: CAATAGAGGATGATTCAACAAAAGGTTGGACGAAAT...CAGTGGAATTACAAAAAGTGACCTTCGTTTGGATAAGGCTGGGGAGGCCCGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp GATATCAAATGGACCAGATATCACAGGGTGAACAAAATCTCCTTAAACAGAAGGAGCAAGGCTTCCCGCTaGATGATGTGTAGGTCACAG +
Preference number: 5 (lower is better)
Translates to: DIKWTRYHRVNKISLNRRSKASR*MMCRSQ
Trigger: CTGTGACCTACACATCATCAAGCGGGAAGCCTTGCT...CCTTCTGTTTAAGGAGATTTTGTTCACCCTGTGATATCTGGTCCATTTGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp GCTCCCATATTATTCTTGAGTCGCAGCCACCCTTTTCCATTTCCATTCTTCATTAGCTCCTTCTGCTGCTaGAACTTCTGGAAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: APILFLSRSHPFPFPFFISSFCC*NFWKSF
Trigger: AAAGCTCTTCCAGAAGTTCAAGCAGCAGAAGGAGCT...AATGAAGAATGGAAATGGAAAAGGGTGGCTGCGACTCAAGAATAATATGGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATATCTGAATCACTGCTCTaGGGGTCCTCAGACAATAGC +
Preference number: 5 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGISESLL*GSSDNS
Trigger: GCTATTGTCTGAGGACCCCAAGAGCAGTGATTCAGA...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCTTAAAGAGGCACATCTaGTGGGCATGTGAAGTTCAA +
Preference number: 5 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCALKRHI*WACEVQ
Trigger: TTGAACTTCACATGCCCACAAGATGTGCCTCTTTAA...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp GGTCACACAACTGTGTGTCCAGGATGCAAATCCAAGGGGTCAGATTCCAAACAGTCACAGAGAAGCAAATaGAGGCATAAAGAGTTTAAG +
Preference number: 5 (lower is better)
Translates to: GHTTVCPGCKSKGSDSKQSQRSK*RHKEFK
Trigger: CTTAAACTCTTTATGCCTCAATTTGCTTCTCTGTGA...CTGTTTGGAATCTGACCCCTTGGATTTGCATCCTGGACACACAGTTGTGTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp ACAATGAAGCATGGGCCTGTATTCAACCACGTCATTCAATTCAACCACTGTGCCTCCTCTATTGGCTGTTaGAACAACGTAATATCCTTG +
Preference number: 5 (lower is better)
Translates to: TMKHGPVFNHVIQFNHCASSIGC*NNVISL
Trigger: CAAGGATATTACGTTGTTCAAACAGCCAATAGAGGA...GGCACAGTGGTTGAATTGAATGACGTGGTTGAATACAGGCCCATGCTTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCTGTGTGGTGGCGTCTTaGGCGCTTCTTGTTTATACT +
Preference number: 5 (lower is better)
Translates to: TFAILLQPPVEDTASDLTCVVAS*ALLVYT
Trigger: AGTATAAACAAGAAGCGCCAAAGACGCCACCACACA...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp AGAACATTTTACGAGCTAGGACCTATTATTCTCTACTGTAGGACACAGGTCATAACGTACAATGAATCCTaGCTGGGTCCTCCTTCCCAT +
Preference number: 5 (lower is better)
Translates to: RTFYELGPIILYCRTQVITYNES*LGPPSH
Trigger: ATGGGAAGGAGGACCCAGCAAGGATTCATTGTACGT...TATGACCTGTGTCCTACAGTAGAGAATAATAGGTCCTAGCTCGTAAAATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACAAGCACAGTGAATGGTTaGGAACTCTACCGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: SINVRGHEKDIILTMKATSTVNG*ELYRQG
Trigger: GCCTTGGCGGTAGAGTTCCAAACCATTCACTGTGCT...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTTCCATGGCATCACGGTaGTTCTGCTTAAGGGATTCA +
Preference number: 5 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFSMASR*FCLRDS
Trigger: TGAATCCCTTAAGCAGAACAACCGTGATGCCATGGA...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp TATGTTTTTAATCATCATCTTCTTTGGCAGGCCAGAATCCAGCTGGACATGCAATTTGTCATGGCAACATaGGCAGGTTGGACCCTGATT +
Preference number: 5 (lower is better)
Translates to: YVFNHHLLWQARIQLDMQFVMAT*AGWTLI
Trigger: AATCAGGGTCCAACCTGCCAATGTTGCCATGACAAA...TTGCATGTCCAGCTGGATTCTGGCCTGCCAAAGAAGATGATGATTAAAAACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp AAGACTAAAATTCAGTCTTTAGTATCCCCCTTTCACAAATGGACCTGCCTGAGCTTCTCAATGGTCTTCTaGTCAGTCAATTCCCCATAC +
Preference number: 5 (lower is better)
Translates to: KTKIQSLVSPFHKWTCLSFSMVF*SVNSPY
Trigger: GTATGGGGAATTGACTGACAAGAAGACCATTGAGAA...GCTCAGGCAGGTCCATTTGTGAAAGGGGGATACTAAAGACTGAATTTTAGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCAAACACTTCGGCTATTaGTCAAAGCCCGTGTCAATC +
Preference number: 5 (lower is better)
Translates to: TFAILLQPPVEDTASDLTKHFGY*SKPVSI
Trigger: GATTGACACGGGCTTTGACAAATAGCCGAAGTGTTT...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTCGTCTTTGGCGCTTCTaGTTTATACTGAGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFRLWRF*FILRKD
Trigger: ATCCTTCCTCAGTATAAACAAGAAGCGCCAAAGACG...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp CATGGAATGAGAACATTTTACGAGCTAGGACCTATTATTCTCTACTGTAGGACATGTGTGGTGGCGTCTTaGGCGCTTCTTGTTTATACT +
Preference number: 5 (lower is better)
Translates to: HGMRTFYELGPIILYCRTCVVAS*ALLVYT
Trigger: AGTATAAACAAGAAGCGCCAAAGACGCCACCACACA...TGTCCTACAGTAGAGAATAATAGGTCCTAGCTCGTAAAATGTTCTCATTCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp GAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGTGTCCAGGATGCAAATCCTCCTTGAGAAGGAGTTaGCAAAAGCTGTATAAAAGT +
Preference number: 5 (lower is better)
Translates to: EFKWFPLGHTTVCPGCKSSLRRS*QKLYKS
Trigger: ACTTTTATACAGCTTTTGCAAACTCCTTCTCAAGGA...GGATTTGCATCCTGGACACACAGTTGTGTGACCTAAGGGAAACCACTTAAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAAAGCTCCTTCTGCTGCTaGAACTTCTGGAAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: NILALTALVIQQSVIPHESSFCC*NFWKSF
Trigger: AAAGCTCTTCCAGAAGTTCAAGCAGCAGAAGGAGCT...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp TTTCTCCTCATGGGCTCCCATATTATTCTTGAGTCGCAGCCACCCTTTTCCATTATTCTTATTGGGCTGTaGACTTTGAGACATTTTTGG +
Preference number: 5 (lower is better)
Translates to: FLLMGSHIILESQPPFSIILIGL*TLRHFW
Trigger: CCAAAAATGTCTCAAAGTCAACAGCCCAATAAGAAT...AATGGAAAAGGGTGGCTGCGACTCAAGAATAATATGGGAGCCCATGAGGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420622.6
CDS-3UTR CAA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATAAGCCTGAGATCAAATTaGTCATGGCAACATTGGCAG +
Preference number: 5 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGISLRSN*SWQHWQ
Trigger: CTGCCAATGTTGCCATGACAAATTTGATCTCAGGCT...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAATCAGTTCTAGTGGCTTaGGTTGGGAATACTGGGAGA +
Preference number: 5 (lower is better)
Translates to: NILALTALVIQQSVIPHESVLVA*VGNTGR
Trigger: TCTCCCAGTATTCCCAACCAAAGCCACTAGAACTGA...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp AAATTGAGGCATAAAGAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGTGTCCCCGTTTCCTCAGATaGCAAGTAAGAGTGAGATTC +
Preference number: 5 (lower is better)
Translates to: KLRHKEFKWFPLGHTTVCPRFLR*QVRVRF
Trigger: GAATCTCACTCTTACTTGCAATCTGAGGAAACGGGG...ACACACAGTTGTGTGACCTAAGGGAAACCACTTAAACTCTTTATGCCTCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp TATGTTTTTAATCATCATCTTCTTTGGCAGGCCAGAATCCAGCTGGACATGCAATCGTCCAACCTTTTGTaGAATCATCCTCTATTGGCT +
Preference number: 5 (lower is better)
Translates to: YVFNHHLLWQARIQLDMQSSNLL*NHPLLA
Trigger: AGCCAATAGAGGATGATTCAACAAAAGGTTGGACGA...TTGCATGTCCAGCTGGATTCTGGCCTGCCAAAGAAGATGATGATTAAAAACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp AGCAAATTGAGGCATAAAGAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGGAACTTCAGCTAGTCTaGAATGTTTATGGACCACCT +
Preference number: 5 (lower is better)
Translates to: SKLRHKEFKWFPLGHTTVELQLV*NVYGPP
Trigger: AGGTGGTCCATAAACATTCAAGACTAGCTGAAGTTC...CACAGTTGTGTGACCTAAGGGAAACCACTTAAACTCTTTATGCCTCAATTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp CATGGAATGAGAACATTTTACGAGCTAGGACCTATTATTCTCTACTGTAGGACAGAGCCAACTGTCTATTaGGATGGTGTTAGTGACTTC +
Preference number: 5 (lower is better)
Translates to: HGMRTFYELGPIILYCRTEPTVY*DGVSDF
Trigger: GAAGTCACTAACACCATCCAAATAGACAGTTGGCTC...TGTCCTACAGTAGAGAATAATAGGTCCTAGCTCGTAAAATGTTCTCATTCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACATCTTTGAGTTCGTGTTaGACTTCCTGCAGTGTGGTC +
Preference number: 5 (lower is better)
Translates to: SINVRGHEKDIILTMKATSLSSC*TSCSVV
Trigger: GACCACACTGCAGGAAGTCAAACACGAACTCAAAGA...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACAAGCTGGATGTCCTCTTaGAGTTCGTGTTTGACTTCC +
Preference number: 5 (lower is better)
Translates to: SINVRGHEKDIILTMKATSWMSS*SSCLTS
Trigger: GGAAGTCAAACACGAACTCAAAGAGGACATCCAGCT...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACAGGCAACATTGGCAGGTaGGACCCTGATTCTTCAAAT +
Preference number: 5 (lower is better)
Translates to: SINVRGHEKDIILTMKATGNIGR*DPDSSN
Trigger: ATTTGAAGAATCAGGGTCCAACCTGCCAATGTTGCC...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp AAGACTAAAATTCAGTCTTTAGTATCCCCCTTTCACAAATGGACCTGCCTGAGCTTGACTTTTGCTATTTaGTTACAACCACCTGTCGAG +
Preference number: 5 (lower is better)
Translates to: KTKIQSLVSPFHKWTCLSLTFAI*LQPPVE
Trigger: CTCGACAGGTGGTTGTAACAAAATAGCAAAAGTCAA...GCTCAGGCAGGTCCATTTGTGAAAGGGGGATACTAAAGACTGAATTTTAGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACAAGAAGGCCCCAGCATTaGACAAGCTTTCAAACTGCT +
Preference number: 5 (lower is better)
Translates to: SINVRGHEKDIILTMKATRRPQH*TSFQTA
Trigger: AGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCT...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp GATATCAAATGGACCAGATATCACAGGGTGAACAAAATCTCCTTAAACAGAAGGGAGGTTCTAAACTCATaGGTTGGTGGGAGAACACTT +
Preference number: 5 (lower is better)
Translates to: DIKWTRYHRVNKISLNRREVLNS*VGGRTL
Trigger: AAGTGTTCTCCCACCAACCAATGAGTTTAGAACCTC...CCTTCTGTTTAAGGAGATTTTGTTCACCCTGTGATATCTGGTCCATTTGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAAAGGTATTCTTCCTGTTaGCAGTCTTGGCTTCATCAG +
Preference number: 5 (lower is better)
Translates to: NILALTALVIQQSVIPHERYSSC*QSWLHQ
Trigger: CTGATGAAGCCAAGACTGCAAACAGGAAGAATACCT...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS TCA 90 bp AAAGATGATCCGTTTCCTCAGATTGCAAGTAAGAGTGAGATTCCTTaGGAAGGAGTTTGCAAAAGCTGTATAAAAGTCCAGGACTTTGAG +
Preference number: 5 (lower is better)
Translates to: KDDPFPQIASKSEIP*EGVCKSCIKVQDFE
Trigger: CTCAAAGTCCTGGACTTTTATACAGCTTTTGCAAACTCCTTCTCAAGGAATCTCACTCTTACTTGCAATCTGAGGAAACGGATCATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp AGCAAATTGAGGCATAAAGAGTTTAAGTGGTTTCCCTTAGGTCACACAACTGTGGTAGTTGTCAAAAGTTaGCCTGACTTTCTCAATGGT +
Preference number: 5 (lower is better)
Translates to: SKLRHKEFKWFPLGHTTVVVVKS*PDFLNG
Trigger: ACCATTGAGAAAGTCAGGCAAACTTTTGACAACTAC...CACAGTTGTGTGACCTAAGGGAAACCACTTAAACTCTTTATGCCTCAATTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCGAACTTCAGCTAGTCTaGAATGTTTATGGACCACCT +
Preference number: 5 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILELQLV*NVYGPP
Trigger: AGGTGGTCCATAAACATTCAAGACTAGCTGAAGTTC...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACAGAGCCAACTGTCTATTaGGATGGTGTTAGTGACTTC +
Preference number: 5 (lower is better)
Translates to: SINVRGHEKDIILTMKATEPTVY*DGVSDF
Trigger: GAAGTCACTAACACCATCCAAATAGACAGTTGGCTC...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp AAGACTAAAATTCAGTCTTTAGTATCCCCCTTTCACAAATGGACCTGCCTGAGCTCCTTGAGAAGGAGTTaGCAAAAGCTGTATAAAAGT +
Preference number: 5 (lower is better)
Translates to: KTKIQSLVSPFHKWTCLSSLRRS*QKLYKS
Trigger: ACTTTTATACAGCTTTTGCAAACTCCTTCTCAAGGA...GCTCAGGCAGGTCCATTTGTGAAAGGGGGATACTAAAGACTGAATTTTAGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCATTGGGCTGTTGACTTaGAGACATTTTTGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILIGLLT*RHFWSA
Trigger: TGCTGACCAAAAATGTCTCAAAGTCAACAGCCCAAT...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCCATATAGCTTTGGTATaGTCATCTGGCTTTTGTGTG +
Preference number: 5 (lower is better)
Translates to: TFAILLQPPVEDTASDLTHIALV*SSGFCV
Trigger: CACACAAAAGCCAGATGACAATACCAAAGCTATATG...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp AAGACTAAAATTCAGTCTTTAGTATCCCCCTTTCACAAATGGACCTGCCTGAGCTTTCAAACTCTGTCATaGACTCTGACCTATCAAGAA +
Preference number: 5 (lower is better)
Translates to: KTKIQSLVSPFHKWTCLSFQTLS*TLTYQE
Trigger: TTCTTGATAGGTCAGAGTCAATGACAGAGTTTGAAA...GCTCAGGCAGGTCCATTTGTGAAAGGGGGATACTAAAGACTGAATTTTAGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCGTATTTAATAGTGGTTaGGCCAAGAAGCCAACATCA +
Preference number: 5 (lower is better)
Translates to: TFAILLQPPVEDTASDLTVFNSG*AKKPTS
Trigger: TGATGTTGGCTTCTTGGCCAAACCACTATTAAATAC...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTTTGGTTTACTCTTCTTaGACCAAGTGCCTTTACAAG +
Preference number: 5 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFLVYSS*TKCLYK
Trigger: CTTGTAAAGGCACTTGGTCAAAGAAGAGTAAACCAA...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCCATAAGCTGCACTTTTaGGTTTACTCTTCTTTGACC +
Preference number: 5 (lower is better)
Translates to: TFAILLQPPVEDTASDLTHKLHF*VYSSLT
Trigger: GGTCAAAGAAGAGTAAACCAAAAAGTGCAGCTTATG...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACATTGGCTTTGACTGCTTaGGTCATTCAACAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: SINVRGHEKDIILTMKATLALTA*VIQQSV
Trigger: CACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAA...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp GATATCAAATGGACCAGATATCACAGGGTGAACAAAATCTCCTTAAACAGAAGGTGGATTTTGTGTAAGTaGACAGTTCATGGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: DIKWTRYHRVNKISLNRRWILCK*TVHGCD
Trigger: GTCACAGCCATGAACTGTCAACTTACACAAAATCCA...CCTTCTGTTTAAGGAGATTTTGTTCACCCTGTGATATCTGGTCCATTTGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAAGTAGTTGTCAAAAGTTaGCCTGACTTTCTCAATGGT +
Preference number: 5 (lower is better)
Translates to: NILALTALVIQQSVIPHEVVVKS*PDFLNG
Trigger: ACCATTGAGAAAGTCAGGCAAACTTTTGACAACTAC...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATAATTTCGTCCAACCTTTaGTTGAATCATCCTCTATTG +
Preference number: 5 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGIISSNL*LNHPLL
Trigger: CAATAGAGGATGATTCAACAAAAGGTTGGACGAAAT...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACAATCCGTTTCCTCAGATaGCAAGTAAGAGTGAGATTC +
Preference number: 5 (lower is better)
Translates to: SINVRGHEKDIILTMKATIRFLR*QVRVRF
Trigger: GAATCTCACTCTTACTTGCAATCTGAGGAAACGGAT...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp ACTTTTGCTATTTTGTTACAACCACCTGTCGAGGATACAGCATCTGATCTTACCATTCTTATTGGGCTGTaGACTTTGAGACATTTTTGG +
Preference number: 5 (lower is better)
Translates to: TFAILLQPPVEDTASDLTILIGL*TLRHFW
Trigger: CCAAAAATGTCTCAAAGTCAACAGCCCAATAAGAAT...GGTAAGATCAGATGCTGTATCCTCGACAGGTGGTTGTAACAAAATAGCAAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp TATGTTTTTAATCATCATCTTCTTTGGCAGGCCAGAATCCAGCTGGACATGCAACTTAATGTCTACTTCTaGGTTGGTTGGTTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: YVFNHHLLWQARIQLDMQLNVYF*VGWFVC
Trigger: ACAAACAAACCAACCAACCAAGAAGTAGACATTAAG...TTGCATGTCCAGCTGGATTCTGGCCTGCCAAAGAAGATGATGATTAAAAACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp TTTCTAAAGAAGGCCCCAGCATTTGACAAGCTTTCAAACTGCTTCCAAAGGTTTCTAGGAAAGGTTAACTaGCCCATAATTACACTTCTA +
Preference number: 5 (lower is better)
Translates to: FLKKAPAFDKLSNCFQRFLGKVN*PIITLL
Trigger: TAGAAGTGTAATTATGGGCAAGTTAACCTTTCCTAG...AAACCTTTGGAAGCAGTTTGAAAGCTTGTCAAATGCTGGGGCCTTCTTTAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp GATATCAAATGGACCAGATATCACAGGGTGAACAAAATCTCCTTAAACAGAAGGTCAAACATACCACATTaGACAGTTTACTTTGGCCGA +
Preference number: 5 (lower is better)
Translates to: DIKWTRYHRVNKISLNRRSNIPH*TVYFGR
Trigger: TCGGCCAAAGTAAACTGTCAAATGTGGTATGTTTGA...CCTTCTGTTTAAGGAGATTTTGTTCACCCTGTGATATCTGGTCCATTTGATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCTTCAAGGTGAATATTTaGGCTTTGACTGCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILFKVNI*ALTALV
Trigger: GACCAAAGCAGTCAAAGCCAAAATATTCACCTTGAA...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp ATTGTCAAAAGGCCCTTATACCCTGTGGTGCAGTGTTTCTATAATAACATACTCCTTTCCCGCTATAATTaGGTTGAAAAAGTTGAGGAG +
Preference number: 5 (lower is better)
Translates to: IVKRPLYPVVQCFYNNILLSRYN*VEKVEE
Trigger: CTCCTCAACTTTTTCAACCAAATTATAGCGGGAAAG...GAGTATGTTATTATAGAAACACTGCACCACAGGGTATAAGGGCCTTTTGACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp AGTGGCTTTGGTTGGGAATACTGGGAGATAGAAAAGCTCATACAAATGGGTATAAAGTGCGTTTGGATTTaGTGTAAGTTGACAGTTCAT +
Preference number: 5 (lower is better)
Translates to: SGFGWEYWEIEKLIQMGIKCVWI*CKLTVH
Trigger: ATGAACTGTCAACTTACACAAAATCCAAACGCACTT...TATACCCATTTGTATGAGCTTTTCTATCTCCCAGTATTCCCAACCAAAGCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp CATGGAATGAGAACATTTTACGAGCTAGGACCTATTATTCTCTACTGTAGGACAATTTCGTCCAACCTTTaGTTGAATCATCCTCTATTG +
Preference number: 5 (lower is better)
Translates to: HGMRTFYELGPIILYCRTISSNL*LNHPLL
Trigger: CAATAGAGGATGATTCAACAAAAGGTTGGACGAAAT...TGTCCTACAGTAGAGAATAATAGGTCCTAGCTCGTAAAATGTTCTCATTCCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp GATATCAAATGGACCAGATATCACAGGGTGAACAAAATCTCCTTAAACAGAAGGGGTTGGTTGGTTTGTTaGTTTTACCACATTTCATGT +
Preference number: 5 (lower is better)
Translates to: DIKWTRYHRVNKISLNRRGWLVC*FYHISC
Trigger: ACATGAAATGTGGTAAAACAAACAAACCAACCAACC...CCTTCTGTTTAAGGAGATTTTGTTCACCCTGTGATATCTGGTCCATTTGATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACAAGCCACAATAGCTTATaGAATCAACTCAGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: SINVRGHEKDIILTMKATSHNSL*NQLSRS
Trigger: ACTTCTGCTGAGTTGATTCAATAAGCTATTGTGGCT...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp AATATTTTGGCTTTGACTGCTTTGGTCATTCAACAGTCAGTGATTCCGCATGAAACCATTCATATAGCTTaGGTATTGTCATCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: NILALTALVIQQSVIPHETIHIA*VLSSGF
Trigger: AAAGCCAGATGACAATACCAAAGCTATATGAATGGT...TTCATGCGGAATCACTGACTGTTGAATGACCAAAGCAGTCAAAGCCAAAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACAAACAACGTAATATCCTaGAAAGTACACAGGAACAAG +
Preference number: 5 (lower is better)
Translates to: SINVRGHEKDIILTMKATNNVIS*KVHRNK
Trigger: CTTGTTCCTGTGTACTTTCAAGGATATTACGTTGTT...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp TCATTTAAGTGTCATGGAATGAGAACATTTTACGAGCTAGGACCTATTATTCTCTCCTCTATTGGCTGTTaGAACAACGTAATATCCTTG +
Preference number: 5 (lower is better)
Translates to: SFKCHGMRTFYELGPIILSSIGC*NNVISL
Trigger: CAAGGATATTACGTTGTTCAAACAGCCAATAGAGGA...GAGAATAATAGGTCCTAGCTCGTAAAATGTTCTCATTCCATGACACTTAAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394968.2
CDS-3UTR CAA 90 bp TCAATAAATGTCAGAGGTCACGAAAAAGATATCATCCTCACCATGAAAGCAACAATTGTCATCTGGCTTTaGTGTGCCTATTTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: SINVRGHEKDIILTMKATIVIWL*CAYLLF
Trigger: AAAAAGCAAATAGGCACACAAAAGCCAGATGACAAT...TGTTGCTTTCATGGTGAGGATGATATCTTTTTCGTGACCTCTGACATTTATTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS-3UTR CAA 90 bp ATTTTCAGTACCATTCATATAGCTTTGGTATTGTCATCTGGCTTTTGTGTGCCTTTGTTTTCTTATTTATaGGCGGGGAAATGGTACCAT +
Preference number: 5 (lower is better)
Translates to: IFSTIHIALVLSSGFCVPLFSYL*AGKWYH
Trigger: ATGGTACCATTTCCCCGCCAATAAATAAGAAAACAA...AGGCACACAAAAGCCAGATGACAATACCAAAGCTATATGAATGGTACTGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322893.12
CDS TCA 72 bp AGCAGAGGGCATCCACACTTTCTCCAGCATGGTAAATaGGGTCCCCGGGAGCACAGTGAATGGTTTGGAACT +
Preference number: 6 (lower is better)
Translates to: SRGHPHFLQHGK*GPREHSEWFGT
Trigger: AGTTCCAAACCATTCACTGTGCTCCCGGGGACCTCATTTACCATGCTGGAGAAAGTGTGGATGCCCTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322893.12
ENST00000394968.2
ENST00000420622.6
CDS CCA 72 bp TCCTTCCCATATCCCAGCACTGGTATTGTAGCGATATaGAGTCCCAATGCTCAAAGCCAGCTGGTAGAGCCA +
Preference number: 6 (lower is better)
Translates to: SFPYPSTGIVAI*SPNAQSQLVEP
Trigger: TGGCTCTACCAGCTGGCTTTGAGCATTGGGACTCCATATCGCTACAATACCAGTGCTGGGATATGGGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322893.12
ENST00000394964.3
ENST00000394968.2
ENST00000420622.6
CDS TCA 72 bp GCTTGTCATGGTAAAGTAGAGAGAGGACACGTACAATaGATCCTTGCTGGGTCCTCCTTCCCATATCCCAGC +
Preference number: 6 (lower is better)
Translates to: ACHGKVERGHVQ*ILAGSSFPYPS
Trigger: GCTGGGATATGGGAAGGAGGACCCAGCAAGGATTCATTGTACGTGTCCTCTCTCTACTTTACCATGACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322893.12
ENST00000394964.3
ENST00000394968.2
ENST00000420622.6
CDS CCA 72 bp AATCCTTGCTGGGTCCTCCTTCCCATATCCCAGCACTaGTATTGTAGCGATATGGAGTCCCAATGCTCAAAG +
Preference number: 6 (lower is better)
Translates to: NPCWVLLPISQH*YCSDMESQCSK
Trigger: CTTTGAGCATTGGGACTCCATATCGCTACAATACCAGTGCTGGGATATGGGAAGGAGGACCCAGCAAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322893.12
ENST00000394964.3
ENST00000394968.2
ENST00000420622.6
CDS CCA 72 bp AACAAAATCTATGGAATGTGCGAAACGCCACCTCTCTaGATGCTGGTCCTGGTTCCTTCAAGAGAGCACTGC +
Preference number: 6 (lower is better)
Translates to: NKIYGMCETPPL*MLVLVPSREHC
Trigger: GCAGTGCTCTCTTGAAGGAACCAGGACCAGCATCCAGAGAGGTGGCGTTTCGCACATTCCATAGATTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394964.3
CDS GCA 72 bp TGGACCACCTCTGTTTTATTCATTGGCGTGAGCTGCTaGAAAACACTTCGGCTATTTGTCAAAGCCCGTGTC +
Preference number: 6 (lower is better)
Translates to: WTTSVLFIGVSC*KTLRLFVKARV
Trigger: GACACGGGCTTTGACAAATAGCCGAAGTGTTTTGCAGCAGCTCACGCCAATGAATAAAACAGAGGTGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322893.12
ENST00000394964.3
ENST00000394968.2
ENST00000420622.6
CDS GCA 72 bp TCCCAGCACTGGTATTGTAGCGATATGGAGTCCCAATaGTCAAAGCCAGCTGGTAGAGCCAACTGTCTATTT +
Preference number: 6 (lower is better)
Translates to: SQHWYCSDMESQ*SKPAGRANCLF
Trigger: AAATAGACAGTTGGCTCTACCAGCTGGCTTTGAGCATTGGGACTCCATATCGCTACAATACCAGTGCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322893.12
ENST00000394964.3
ENST00000394968.2
ENST00000420622.6
CDS CAA 90 bp TGGAGTCCCAATGCTCAAAGCCAGCTGGTAGAGCCAACTGTCTATTaGGATGGTGTTAGTGACTTCATCAATGACCTCGTAGTCTCCGAT +
Preference number: 6 (lower is better)
Translates to: WSPNAQSQLVEPTVY*DGVSDFINDLVVSD
Trigger: ATCGGAGACTACGAGGTCATTGATGAAGTCACTAACACCATCCAAATAGACAGTTGGCTCTACCAGCTGGCTTTGAGCATTGGGACTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322893.12
ENST00000394964.3
ENST00000394968.2
ENST00000420622.6
CDS GCA 72 bp TTATGGACCACCTCTGTTTTATTCATTGGCGTGAGCTaGTGCAAAACACTTCGGCTATTTGTCAAAGCCCGT +
Preference number: 6 (lower is better)
Translates to: LWTTSVLFIGVS*CKTLRLFVKAR
Trigger: ACGGGCTTTGACAAATAGCCGAAGTGTTTTGCAGCAGCTCACGCCAATGAATAAAACAGAGGTGGTCCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322893.12
ENST00000394964.3
ENST00000394968.2
ENST00000420622.6
CDS CAA 72 bp AATGCTCAAAGCCAGCTGGTAGAGCCAACTGTCTATTaGGATGGTGTTAGTGACTTCATCAATGACCTCGTA +
Preference number: 6 (lower is better)
Translates to: NAQSQLVEPTVY*DGVSDFINDLV
Trigger: TACGAGGTCATTGATGAAGTCACTAACACCATCCAAATAGACAGTTGGCTCTACCAGCTGGCTTTGAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322893.12
ENST00000394964.3
ENST00000394968.2
ENST00000420622.6
CDS CAA 72 bp AATCTTTATGTGTTGGATTTTGTTGGTGTCTTTCATTaGCTCAAAAATTCAGTCTTCGGCCGGGCGCGGTGG +
Preference number: 6 (lower is better)
Translates to: NLYVLDFVGVFH*LKNSVFGRARW
Trigger: CCACCGCGCCCGGCCGAAGACTGAATTTTTGAGCAAATGAAAGACACCAACAAAATCCAACACATAAAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394964.3
CDS TCA 72 bp CCGTTTCCTCAGATTGCAAGTAAGAGTGAGATTCCTTaGGAAGGAGTTTGCAAAAGCTGTATAAAAGTCCAG +
Preference number: 6 (lower is better)
Translates to: PFPQIASKSEIP*EGVCKSCIKVQ
Trigger: CTGGACTTTTATACAGCTTTTGCAAACTCCTTCTCAAGGAATCTCACTCTTACTTGCAATCTGAGGAAACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322893.12
ENST00000394968.2