RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNH2 (Homo sapiens)

Ensembl gene IDs: ENSG00000055118

Ensembl transcript IDs: ENST00000262186.10, ENST00000330883.9, ENST00000461280.2, ENST00000473610.5, ENST00000532957.5, ENST00000683359.1, ENST00000684241.1

Found 291 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp AGCAGAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTACAGGCCCCACCTACTaGCGGCCCTGCCCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: SRKVLEVPKAQGRVPPGSTGPTY*RPCPCP
Trigger: GGGGCAGGGGCAGGGCCGGCAGTAGGTGGGGCCTGT...ACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
3UTR-3UTR TCA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTACGGTCAGGGCCTCCTaGGCAGGGCCTCCAAGGGGA +
Preference number: 2 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPATVRAS*AGPPRG
Trigger: TCCCCTTGGAGGCCCTGCTCAGGAGGCCCTGACCGT...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
3UTR-3UTR TCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCGCCTTGATCCCTGGGTaGGCCACGTGTCCACACTGG +
Preference number: 2 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLALIPG*ATCPHW
Trigger: CCAGTGTGGACACGTGGCTCACCCAGGGATCAAGGC...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
3UTR-3UTR TCA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCACGGTCAGGGCCTCCTaGGCAGGGCCTCCAAGGGGA +
Preference number: 2 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSTVRAS*AGPPRG
Trigger: TCCCCTTGGAGGCCCTGCTCAGGAGGCCCTGACCGT...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
3UTR-3UTR TCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGCCTTGATCCCTGGGTaGGCCACGTGTCCACACTGG +
Preference number: 2 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSALIPG*ATCPHW
Trigger: CCAGTGTGGACACGTGGCTCACCCAGGGATCAAGGC...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
3UTR-3UTR CCA 90 bp AGCAGAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTCAGCGCCTTGATCCCTaGGTGAGCCACGTGTCCACA +
Preference number: 2 (lower is better)
Translates to: SRKVLEVPKAQGRVPPGSQRLDP*VSHVST
Trigger: TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTG...ACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
3UTR-3UTR CCA 90 bp AGCAGAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTGATGGTCCCAAGGGCTaGGGGAGGAGCTGTGCTTTC +
Preference number: 2 (lower is better)
Translates to: SRKVLEVPKAQGRVPPGSDGPKG*GRSCAF
Trigger: GAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATC...ACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
3UTR-3UTR CCA 90 bp AGCAGAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTGACTGCAGGAGAAGATaGTCCCAAGGGCTGGGGGAG +
Preference number: 2 (lower is better)
Translates to: SRKVLEVPKAQGRVPPGSDCRRR*SQGLGE
Trigger: CTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGTC...ACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
3UTR-3UTR CCA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCCAGCGCCTTGATCCCTaGGTGAGCCACGTGTCCACA +
Preference number: 2 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSQRLDP*VSHVST
Trigger: TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTG...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
3UTR GCA 72 bp AGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTaGTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGC +
Preference number: 3 (lower is better)
Translates to: RRRWSQGLGEEL*FRVPLPFHGQG
Trigger: GCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
3UTR GCA 72 bp GAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTaGCTCCGGGCAGTTAGACCAGCTAATGCCCTCAGG +
Preference number: 3 (lower is better)
Translates to: EKSLRCLRPRAG*LRAVRPANALR
Trigger: CCTGAGGGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCAAGGGGAGCGGCCCAGCAGCGCCTTGATCCCTGGGTGAGCCACGTGTCCACAAGTGCCTGCGCGATCTaGGCGGCAGCGCGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: PRGAAQQRLDPWVSHVSTSACAI*AAARRC
Trigger: GCAGCGCCGCGCTGCCGCGCAGATCGCGCAGGCACT...TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTGCTGGGCCGCTCCCCTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CCA 90 bp CCAAGGGGAGCGGCCCAGCAGCGCCTTGATCCCTGGGTGAGCCACGTGTCCACACTGCCCATGGCCCCGTaGCGTGGGCCCTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PRGAAQQRLDPWVSHVSTLPMAP*RGPCCQ
Trigger: CTGGCAGCAGGGCCCACGCCACGGGGCCATGGGCAG...TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTGCTGGGCCGCTCCCCTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR CCA 90 bp CCAAGGGGAGCGGCCCAGCAGCGCCTTGATCCCTGGGTGAGCCACGTGTCCACACCTGGGCCACGAGGCTaGAGATGCGCACGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PRGAAQQRLDPWVSHVSTPGPRG*RCARPA
Trigger: GGCGGGCCGTGCGCATCTCCAGCCTCGTGGCCCAGG...TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTGCTGGGCCGCTCCCCTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR GCA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCGGGCCAGCGACTCGCTaGTGGGTGCCGCGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: RCLRPRAGCLRAVRPANAGPATR*WVPRAS
Trigger: TGACGCCCGCGGCACCCAGCAGCGAGTCGCTGGCCC...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR GCA 90 bp CCAAGGGGAGCGGCCCAGCAGCGCCTTGATCCCTGGGTGAGCCACGTGTCCACACGCGGGCCCGAGCCCTaGCACGTGGTTGTCCATGGC +
Preference number: 4 (lower is better)
Translates to: PRGAAQQRLDPWVSHVSTRGPEP*HVVVHG
Trigger: GCCATGGACAACCACGTGGCAGGGCTCGGGCCCGCG...TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTGCTGGGCCGCTCCCCTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR GCA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCACAGGCCCCACCTACTaGCGGCCCTGCCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: RCLRPRAGCLRAVRPANATGPTY*RPCPCP
Trigger: GGGGCAGGGGCAGGGCCGGCAGTAGGTGGGGCCTGT...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTGCACTAGGCTTCGGGTaGCCCGGCCGGGCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPAALGFG*PGRAVV
Trigger: GACCACGGCCCGGCCGGGCCACCCGAAGCCTAGTGC...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CCA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCGGGCCAGGCTGCAGCTaGAGCCCGAGGCGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: RCLRPRAGCLRAVRPANAGPGCS*SPRRRG
Trigger: ACCCCGACGCCTCGGGCTCCAGCTGCAGCCTGGCCC...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR TCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCATCCGCACCGGCATCCTaGGCCCATGGGCGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSSAPAS*AHGRAG
Trigger: CCCGGCCCGCCCATGGGCTCAGGATGCCGGTGCGGA...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR TCA 90 bp CCAAGGGGAGCGGCCCAGCAGCGCCTTGATCCCTGGGTGAGCCACGTGTCCACAACGGTCAGGGCCTCCTaGGCAGGGCCTCCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: PRGAAQQRLDPWVSHVSTTVRAS*AGPPRG
Trigger: TCCCCTTGGAGGCCCTGCTCAGGAGGCCCTGACCGT...TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTGCTGGGCCGCTCCCCTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCCAGCGCGGCGCTGCGTaGGCGGCCCGTGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVQRGAA*AARAGS
Trigger: ACTTCCTGCACGGGCCGCGCACGCAGCGCCGCGCTG...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR GCA 90 bp AGCAGAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTGCGCCCAGCAGTGCCTaGGCGATCTGCGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SRKVLEVPKAQGRVPPGSAPSSA*AICAAA
Trigger: CGCTGCCGCGCAGATCGCGCAGGCACTGCTGGGCGC...ACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR GCA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCTCGGGGTTGAGGCTGTaGGCCCGGGGCGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: RCLRPRAGCLRAVRPANASGLRL*ARGDGS
Trigger: GCTCCCATCGCCCCGGGCGCACAGCCTCAACCCCGA...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR GCA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTGGAGGGCATCCAGCCTaGTCTCCACGTCGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPAGGHPA*SPRRPG
Trigger: CCCGGGGCGACGTGGAGAGCAGGCTGGATGCCCTCC...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCCAGGGTGCCGTGCTCTaGCCGCCCGCCAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVQGAVL*PPASPA
Trigger: TGCTGGGCTGGCGGGCGGGCAGAGCACGGCACCCTG...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR CCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCGCACCCCGGCGCGCATaGCCTCGATGTCGTCGGCCG +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVAPRRA*PRCRRP
Trigger: CGGCCGACGACATCGAGGCCATGCGCGCCGGGGTGC...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CCA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTGGCCAGGCCCCGGGGTaGTCACAGCACTGTAGGCGG +
Preference number: 4 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPAGQAPG*SQHCRR
Trigger: CCGCCTACAGTGCTGTGACCACCCCGGGGCCTGGCC...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCGGGCAGCAGCCTGCCTaGCTCGAGCTGCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: RCLRPRAGCLRAVRPANAGQQPA*LELPMA
Trigger: GGCCATGGGCAGCTCGAGCCAGGCAGGCTGCTGCCC...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR TCA 90 bp CCAAGGGGAGCGGCCCAGCAGCGCCTTGATCCCTGGGTGAGCCACGTGTCCACAGAGCAGCCCCTGGCATaGAGCCAGGGTGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: PRGAAQQRLDPWVSHVSTEQPLA*SQGGCG
Trigger: GCCACAACCACCCTGGCTTCATGCCAGGGGCTGCTC...TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTGCTGGGCCGCTCCCCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR GCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCCGACTCGCTGCTGGGTaGCGCGGGCGTCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVRLAAG*RGRQVH
Trigger: GTGGACCTGACGCCCGCGGCACCCAGCAGCGAGTCG...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR GCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCACCGCTGCGCAGTGGGTaGATGGCCCCGGTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSPLRSG*MAPVLA
Trigger: CGCCAGCACCGGGGCCATGCACCCACTGCGCAGCGG...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR GCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCGGAGGGGGCTGGAGCTaGGGCCTGGGCCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLGGGWS*GLGPHP
Trigger: AGGATGAGGGCCCAGGCCGCAGCTCCAGCCCCCTCC...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCGGCAGCCCCACTAACTaGCCGGGTCCGAGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: RCLRPRAGCLRAVRPANAGSPTN*PGPSRV
Trigger: GACACGGCTCGGACCCGGGCAGTTAGTGGGGCTGCC...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGACAGGCCCCACCTACTaGCGGCCCTGCCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRTGPTY*RPCPCP
Trigger: GGGGCAGGGGCAGGGCCGGCAGTAGGTGGGGCCTGT...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCCCACGAGGCTGGAGATaGGCACGGCCCGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVPRGWR*ARPASP
Trigger: GGGTGAGGCGGGCCGTGCGCATCTCCAGCCTCGTGG...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR CCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGTCTTGGCGCGGCCTaGGGCCAGCCAGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSGLGAA*GQPAGG
Trigger: CCCACCAGCTGGCTGGCCCCAGGCCGCGCCAAGACC...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCCCAGCGACTCGCTGCTaGGTGCCGCGGGCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVPATRC*VPRASG
Trigger: ACCTGACGCCCGCGGCACCCAGCAGCGAGTCGCTGG...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CCA 90 bp AGCAGAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTAGGCGCGGCGCACGCTaGCGCAGCTTTCTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: SRKVLEVPKAQGRVPPGSRRGAR*RSFLGS
Trigger: GCTCCCGAGAAAGCTGCGCCAGCGTGCGCCGCGCCT...ACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CCA 90 bp AGCAGAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTGCGCAGTGGGTGCATaGCCCCGGTGCTGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: SRKVLEVPKAQGRVPPGSCAVGA*PRCWRG
Trigger: GCCACGCCAGCACCGGGGCCATGCACCCACTGCGCA...ACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CCA 90 bp CCAAGGGGAGCGGCCCAGCAGCGCCTTGATCCCTGGGTGAGCCACGTGTCCACACCCGAAGGCAGCCCTTaGTGGCCCCTCGGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: PRGAAQQRLDPWVSHVSTPEGSP*WPLGRV
Trigger: AACCCTTCCGAGGGGCCACCAAGGGCTGCCTTCGGG...TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTGCTGGGCCGCTCCCCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCGGGAGCTCCTGGTACTaGCGGCCCCGACTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLGSSWY*RPRLSP
Trigger: GGGGGACAGTCGGGGCCGCCAGTACCAGGAGCTCCC...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp AGCAGAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTGTGAGGGCCCCCAGCTaGCCCGGTAGGGAGAGGCGT +
Preference number: 4 (lower is better)
Translates to: SRKVLEVPKAQGRVPPGSVRAPS*PGRERR
Trigger: ACGCCTCTCCCTACCGGGCCAGCTGGGGGCCCTCAC...ACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCCCTGCCCCTCTCACTaGGGCCCAGGGGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLPCPSH*GPGDCR
Trigger: CCTGCAGTCCCCTGGGCCCCAGTGAGAGGGGCAGGG...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAAGCCAGGGTGGTTGTaGCTGGGCCCCAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPAKPGWL*LGPRAG
Trigger: CCCAGCCCTGGGGCCCAGCCACAACCACCCTGGCTT...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR TCA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTGGGTCTCCAGCCTGTTaGGCTGGCGCTGGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPAGSPAC*AGAGGH
Trigger: ATGCCCTCCAGCGCCAGCTCAACAGGCTGGAGACCC...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCCTCGGCGCCCAGCAGTaGCTGCGCGATCTGCGCGGC +
Preference number: 4 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSLGAQQ*LRDLRG
Trigger: GCCGCGCAGATCGCGCAGGCACTGCTGGGCGCCGAG...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR GCA 90 bp CCAAGGGGAGCGGCCCAGCAGCGCCTTGATCCCTGGGTGAGCCACGTGTCCACATGGTCGCCCAGGTTGTaGAGCCAGCCGATGCGTGAG +
Preference number: 4 (lower is better)
Translates to: PRGAAQQRLDPWVSHVSTWSPRL*SQPMRE
Trigger: CTCACGCATCGGCTGGCTGCACAACCTGGGCGACCA...TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTGCTGGGCCGCTCCCCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTGGCCCTCATCCTCACTaGTCTCAGGGCTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPAGPHPH*SQGWRG
Trigger: GCCCCTCCAGCCCTGAGAGCAGTGAGGATGAGGGCC...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGGGAGGGCATCCAGCCTaGTCTCCACGTCGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRGGHPA*SPRRPG
Trigger: CCCGGGGCGACGTGGAGAGCAGGCTGGATGCCCTCC...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCGGCAGCCCCACTAACTaGCCGGGTCCGAGCCGTGTC +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLGSPTN*PGPSRV
Trigger: GACACGGCTCGGACCCGGGCAGTTAGTGGGGCTGCC...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp AGCAGAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTAGGCCCAGGGCCGGGTaGCTCCGGGCAGTTAGACCA +
Preference number: 4 (lower is better)
Translates to: SRKVLEVPKAQGRVPPGSRPRAG*LRAVRP
Trigger: TGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCT...ACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCATGGCGTGGGCCCTGCTaGCAGGGTGCCGTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSWRGPC*QGAVLC
Trigger: GCAGAGCACGGCACCCTGGCAGCAGGGCCCACGCCA...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR GCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCACTGCCTGGCTCGAGCTaGCCATGGCCCCGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSLPGSS*PWPRGV
Trigger: CACGCCACGGGGCCATGGGCAGCTCGAGCCAGGCAG...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR GCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCGCGTGGGCAGCAGCCTaGCTGGCTCGAGCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLAWAAA*LARAAH
Trigger: ATGGGCAGCTCGAGCCAGGCAGGCTGCTGCCCACGC...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR GCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAAGTCCCAGCCCAGGCTaGACCCCCGAGGCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSSPSPG*TPEAGR
Trigger: TCGGCCAGCCTCGGGGGTGCAGCCTGGGCTGGGACT...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR CCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCATTCTGCGGCGCGACGTaGCCCCTCCGCACCGGCATC +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSFCGAT*PLRTGI
Trigger: GATGCCGGTGCGGAGGGGCCACGTCGCGCCGCAGAA...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CCA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGTCAGGCGGAAGGTCTTaGCGCGGCCTGGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRSGGRS*RGLGPA
Trigger: GGCTGGCCCCAGGCCGCGCCAAGACCTTCCGCCTGA...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CCA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCGCTGGAGCTGCGGCCTaGGCCCTCATCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: RCLRPRAGCLRAVRPANAAGAAA*ALILTA
Trigger: AGCAGTGAGGATGAGGGCCCAGGCCGCAGCTCCAGC...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGCCAGGCCCCGGGGTaGTCACAGCACTGTAGGCGG +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSGQAPG*SQHCRR
Trigger: CCGCCTACAGTGCTGTGACCACCCCGGGGCCTGGCC...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGGTGAGGGCCCCCAGCTaGCCCGGTAGGGAGAGGCGT +
Preference number: 4 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRVRAPS*PGRERR
Trigger: ACGCCTCTCCCTACCGGGCCAGCTGGGGGCCCTCAC...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTGGCATGAAGCCAGGGTaGTTGTGGCTGGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPAGMKPG*LWLGPR
Trigger: CCTGGGGCCCAGCCACAACCACCCTGGCTTCATGCC...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR CCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCCTGCACCCCCGAGGCTaGCCGACTGGCAACCAGAGC +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVLHPRG*PTGNQS
Trigger: GCTCTGGTTGCCAGTCGGCCAGCCTCGGGGGTGCAG...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR CCA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCCCGCCATGGAGGACTTaGCTCCCTGCAGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RCLRPRAGCLRAVRPANAPPWRT*LPAACL
Trigger: CAGGCAGGCTGCAGGGAGCCAAGTCCTCCATGGCGG...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR TCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCCGGTGGTTGGTGTCATaGGCCGGGGACCCCACCATG +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVRWLVS*AGDPTM
Trigger: CATGGTGGGGTCCCCGGCTCATGACACCAACCACCG...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR TCA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGTGCGGCCGGGGTGGCTaGCCACCTCCTCGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRCGRGG*PPPRWH
Trigger: ATGCCAACGAGGAGGTGGTCAGCCACCCCGGCCGCA...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp CCAAGGGGAGCGGCCCAGCAGCGCCTTGATCCCTGGGTGAGCCACGTGTCCACAAGCCAGAGCCGAAGATaGGCAGGTCGAAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: PRGAAQQRLDPWVSHVSTSQSRR*AGRRGW
Trigger: CCATCCCCTTCGACCTGCTCATCTTCGGCTCTGGCT...TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTGCTGGGCCGCTCCCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCCAGCCAGCCGATGCGTaGGTCCATGTGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RCLRPRAGCLRAVRPANAQPADA*VHVWLL
Trigger: GAGCAGCCACACATGGACTCACGCATCGGCTGGCTG...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCGGGTCTCCAGCCTGTTaGGCTGGCGCTGGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVGSPAC*AGAGGH
Trigger: ATGCCCTCCAGCGCCAGCTCAACAGGCTGGAGACCC...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCCGGCCAAGACTGGACTaGGGGCGCCGGGTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSRPRLD*GRRVLA
Trigger: AGCGAGGACCCGGCGCCCGCAGTCCAGTCTTGGCCG...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR GCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCACAGGTGCAGGGTCGCTaGATCACCTCGGCCCGCGAG +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSQVQGR*ITSARE
Trigger: CTCGCGGGCCGAGGTGATGCAGCGACCCTGCACCTG...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR GCA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCGGCCGCCCAGGCCGCTaGTGTTGTAGGGTTTGCCTA +
Preference number: 4 (lower is better)
Translates to: RCLRPRAGCLRAVRPANAGRPGR*CCRVCL
Trigger: TAGGCAAACCCTACAACAGCAGCGGCCTGGGCGGCC...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCAAGGGGAGCGGCCCAGCAGCGCCTTGATCCCTGGGTGAGCCACGTGTCCACACCCCTCGGAAGGGTTTaGAGTGCTGCAGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PRGAAQQRLDPWVSHVSTPLGRV*SAAAVS
Trigger: GCTCACTGCTGCAGCACTGCAAACCCTTCCGAGGGG...TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTGCTGGGCCGCTCCCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTGACACCTCCCCTGGCTaGTCCGTGTCCTTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPADTSPG*SVSLSV
Trigger: CACGGACAAGGACACGGAGCAGCCAGGGGAGGTGTC...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCCGTGGCGTGGGCCCTaGTGCCAGGGTGCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFPWRGP*CQGAVL
Trigger: GAGCACGGCACCCTGGCAGCAGGGCCCACGCCACGG...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR CCA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGCAAGCCGCTGCGCAGTaGGTGCATGGCCCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRQAAAQ*VHGPGA
Trigger: AGCACCGGGGCCATGCACCCACTGCGCAGCGGCTTG...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCCCGAAGGCAGCCCTTaGTGGCCCCTCGGAAGGGTT +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLPEGSP*WPLGRV
Trigger: AACCCTTCCGAGGGGCCACCAAGGGCTGCCTTCGGG...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCGGCCGACACCTCCCCTaGCTGCTCCGTGTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVGRHLP*LLRVLV
Trigger: GACAAGGACACGGAGCAGCCAGGGGAGGTGTCGGCC...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTTCCAGCCTGTTGAGCTaGCGCTGGAGGGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPASSLLS*RWRASS
Trigger: GCTGGATGCCCTCCAGCGCCAGCTCAACAGGCTGGA...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTGGGAGAGGCGTCGTGTaGGGCCTTCTTGGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPAGRGVV*GLLGEA
Trigger: AGCTTCCCCAAGAAGGCCCCACACGACGCCTCTCCC...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp AGCAGAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTAGTCCGAGGTGGAGTTaGGCAAGCCGCTGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: SRKVLEVPKAQGRVPPGSSPRWS*ASRCAV
Trigger: CACTGCGCAGCGGCTTGCTCAACTCCACCTCGGACT...ACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR TCA 90 bp CCAAGGGGAGCGGCCCAGCAGCGCCTTGATCCCTGGGTGAGCCACGTGTCCACACCTCCTCGTTGGCATTaGCGTAGGTGGTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: PRGAAQQRLDPWVSHVSTPPRWH*RRWCGS
Trigger: ACTTCCGCACCACCTACGTCAATGCCAACGAGGAGG...TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTGCTGGGCCGCTCCCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAGTACAGCCGCTGGATaGTGGCCGACACGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPASTAAG*WPTRCR
Trigger: TCGGCAACGTGTCGGCCATCATCCAGCGGCTGTACT...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCGTAGGTCACAGTAGGTaGGGGCCCGCACATCCCCGT +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLVGHSR*GPAHPR
Trigger: ACGGGGATGTGCGGGCCCTCACCTACTGTGACCTAC...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCGCTTGCGTTGCCGACTaGAGCCACCCTCTAACTCCG +
Preference number: 4 (lower is better)
Translates to: RCLRPRAGCLRAVRPANAACVAD*SHPLTP
Trigger: CGGAGTTAGAGGGTGGCTTCAGTCGGCAACGCAAGC...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp AGCAGAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTGGTCGCCCAGGTTGTaGAGCCAGCCGATGCGTGAG +
Preference number: 4 (lower is better)
Translates to: SRKVLEVPKAQGRVPPGSWSPRL*SQPMRE
Trigger: CTCACGCATCGGCTGGCTGCACAACCTGGGCGACCA...ACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCCCTCTAACTCCGTACTaGCGGGGGAGCCCGGGATCA +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVPLTPY*RGSPGS
Trigger: TGATCCCGGGCTCCCCCGGCAGTACGGAGTTAGAGG...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTCCGTGTCCTTGTCCGTaGGCCTGCGGAAGGACAACT +
Preference number: 4 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPAPCPCP*ACGRTT
Trigger: AGTTGTCCTTCCGCAGGCGCACGGACAAGGACACGG...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCGACACCTCCCCTGGCTaGTCCGTGTCCTTGTCCGTG +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLDTSPG*SVSLSV
Trigger: CACGGACAAGGACACGGAGCAGCCAGGGGAGGTGTC...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGCCCTCATCCTCACTaGTCTCAGGGCTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSGPHPH*SQGWRG
Trigger: GCCCCTCCAGCCCTGAGAGCAGTGAGGATGAGGGCC...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCGGAGGGGGCTGGAGCTaGGGCCTGGGCCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFGGGWS*GLGPHP
Trigger: AGGATGAGGGCCCAGGCCGCAGCTCCAGCCCCCTCC...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTGGGACCAGCGTCATCTaGCTCTGTAGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPAGTSVI*LCSSCR
Trigger: CCTGCAGCTGCTACAGAGGCAGATGACGCTGGTCCC...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTTGGGGCCCAGGGGACTaGAGGAGAAGATGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPAWGPGD*RRRWSQ
Trigger: TTGGGACCATCTTCTCCTGCAGTCCCCTGGGCCCCA...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCTACTCCTCGAGGCGCTaGCGCAGGGGATTGGGGATC +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVYSSRR*RRGLGI
Trigger: GATCCCCAATCCCCTGCGCCAGCGCCTCGAGGAGTA...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp AGCAGAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTACTCCTCGAGGCGCTaGCGCAGGGGATTGGGGATC +
Preference number: 4 (lower is better)
Translates to: SRKVLEVPKAQGRVPPGSYSSRR*RRGLGI
Trigger: GATCCCCAATCCCCTGCGCCAGCGCCTCGAGGAGTA...ACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCGAAGGCAGCCCTTGGTaGCCCCTCGGAAGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVEGSPW*PLGRVC
Trigger: GCAAACCCTTCCGAGGGGCCACCAAGGGCTGCCTTC...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCACATCGAGGGAGCTCCTaGTACTGGCGGCCCCGACTG +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSHRGSS*YWRPRL
Trigger: CAGTCGGGGCCGCCAGTACCAGGAGCTCCCTCGATG...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGTTGAGCTGGCGCTaGAGGGCATCCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLLLSWR*RASSLL
Trigger: GAGCAGGCTGGATGCCCTCCAGCGCCAGCTCAACAG...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCGGGAGAGGCGTCGTGTaGGGCCTTCTTGGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVGRGVV*GLLGEA
Trigger: AGCTTCCCCAAGAAGGCCCCACACGACGCCTCTCCC...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCCAGCGCCTTGATCCCTaGGTGAGCCACGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: RCLRPRAGCLRAVRPANAQRLDP*VSHVST
Trigger: TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTG...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCCCGAGGCTGGCCGACTaGCAACCAGAGCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSPRLAD*QPEQPL
Trigger: CAGGGGCTGCTCTGGTTGCCAGTCGGCCAGCCTCGG...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR CCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGACAGGACCTCCTaGGCCACGAGGCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVRDRTS*ATRLEM
Trigger: CATCTCCAGCCTCGTGGCCCAGGAGGTCCTGTCCCT...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR TCA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCCCTCCTCGTTGGCATTaGCGTAGGTGGTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: RCLRPRAGCLRAVRPANAPPRWH*RRWCGS
Trigger: ACTTCCGCACCACCTACGTCAATGCCAACGAGGAGG...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp AGCAGAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTAGCCAGAGCCGAAGATaGGCAGGTCGAAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: SRKVLEVPKAQGRVPPGSSQSRR*AGRRGW
Trigger: CCATCCCCTTCGACCTGCTCATCTTCGGCTCTGGCT...ACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCACAGCCAGCCGATGCGTaGGTCCATGTGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSQPADA*VHVWLL
Trigger: GAGCAGCCACACATGGACTCACGCATCGGCTGGCTG...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCTCACATACTTGTCCTTaGTGGAGGGGCCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLSHTCP*WRGRPG
Trigger: GCCTGGGCGGCCCCTCCATCAAGGACAAGTATGTGA...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCACGGTCAGGGCCTCCTaGGCAGGGCCTCCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFTVRAS*AGPPRG
Trigger: TCCCCTTGGAGGCCCTGCTCAGGAGGCCCTGACCGT...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCAGGCGATTTCCACTTTaGGCTCCTCGGCGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLRRFPL*APRRPA
Trigger: TGCTGGGCGCCGAGGAGCGCAAAGTGGAAATCGCCT...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR GCA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTGAGTCCATGTGTGGCTaGTCCATGTTGCCGATGGCG +
Preference number: 4 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPAESMCG*SMLPMA
Trigger: CGCCATCGGCAACATGGAGCAGCCACACATGGACTC...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGGGCCGCCCAGGCCGCTaGTGTTGTAGGGTTTGCCTA +
Preference number: 4 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRGRPGR*CCRVCL
Trigger: TAGGCAAACCCTACAACAGCAGCGGCCTGGGCGGCC...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCATGTGGTAGCGGGCTGTaGCCGAGTACAGCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSCGSGL*PSTAAG
Trigger: TCCAGCGGCTGTACTCGGGCACAGCCCGCTACCACA...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGTGTGGTAGCGGGCTGTaGCCGAGTACAGCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRCGSGL*PSTAAG
Trigger: TCCAGCGGCTGTACTCGGGCACAGCCCGCTACCACA...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCCCCCTCGGAAGGGTTTaGAGTGCTGCAGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVPLGRV*SAAAVS
Trigger: GCTCACTGCTGCAGCACTGCAAACCCTTCCGAGGGG...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGGGGGAGGAGCTGTaGTTTCGAGTTCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLLGEEL*FRVPLP
Trigger: GGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCTGGGGCCCAGGGGACTaGAGGAGAAGATGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVWGPGD*RRRWSQ
Trigger: TTGGGACCATCTTCTCCTGCAGTCCCCTGGGCCCCA...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCAGGCCCAGGGCCGGGTaGCTCCGGGCAGTTAGACCA +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFRPRAG*LRAVRP
Trigger: TGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCT...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCCCCAGGGACAGGACCTaGGTGACCTTCTCAGTGACA +
Preference number: 4 (lower is better)
Translates to: RCLRPRAGCLRAVRPANAPRDRT*VTFSVT
Trigger: TGTCACTGAGAAGGTCACCCAGGTCCTGTCCCTGGG...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CCA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGCATTCTTCCCCAGGATaGCCACGACGACGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRHSSPG*PRRRRP
Trigger: GGGGCGACGTCGTCGTGGCCATCCTGGGGAAGAATG...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCGGCCGACACCTCCCCTaGCTGCTCCGTGTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSGRHLP*LLRVLV
Trigger: GACAAGGACACGGAGCAGCCAGGGGAGGTGTCGGCC...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCATCCAGCCTGTTGAGCTaGCGCTGGAGGGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSSSLLS*RWRASS
Trigger: GCTGGATGCCCTCCAGCGCCAGCTCAACAGGCTGGA...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCGATGGTCCCAAGGGCTaGGGGAGGAGCTGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVDGPKG*GRSCAF
Trigger: GAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATC...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCGGCTGGGGCCGCCATaGAGGACTTGGCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFRLGPP*RTWLPA
Trigger: TGCAGGGAGCCAAGTCCTCCATGGCGGCCCCAGCCG...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR TCA 90 bp AGCAGAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTGTGCATGTGTGGTCTTaGACTTCATGGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SRKVLEVPKAQGRVPPGSVHVWS*TSWPGP
Trigger: GGGCCCTGGCCATGAAGTTCAAGACCACACATGCAC...ACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCGCCTTGATCCCTGGGTaGGCCACGTGTCCACACTGG +
Preference number: 4 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSALIPG*ATCPHW
Trigger: CCAGTGTGGACACGTGGCTCACCCAGGGATCAAGGC...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCATGCAGGCTAGCCAGTaGGCGATGAGCGCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVMQASQ*AMSAKV
Trigger: CACCTTTGCGCTCATCGCGCACTGGCTAGCCTGCAT...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCCATCCCCGTTCGACTTaGCAGGCCTTGCATACAGGT +
Preference number: 4 (lower is better)
Translates to: RCLRPRAGCLRAVRPANAHPRST*QALHTG
Trigger: ACCTGTATGCAAGGCCTGGCAAGTCGAACGGGGATG...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCACCTTGTCCGTGCGCCTaGGGAAGGACAACTTGCGCT +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSPCPCA*GRTTCA
Trigger: AGCGCAAGTTGTCCTTCCGCAGGCGCACGGACAAGG...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCGGTTGCAAGTGTCGCTaGTCTTCTCGCAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RCLRPRAGCLRAVRPANAGCKCR*SSRSPP
Trigger: TGGAGGACTGCGAGAAGAGCAGCGACACTTGCAACC...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCGCCTGACAGGGGGTTaGAAGTGTCGCTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLRLTGG*KCRCSS
Trigger: AGAAGAGCAGCGACACTTGCAACCCCCTGTCAGGCG...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCCGCCTGACAGGGGGTTaGAAGTGTCGCTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVRLTGG*KCRCSS
Trigger: AGAAGAGCAGCGACACTTGCAACCCCCTGTCAGGCG...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGGACAGTGGCCATGTCTaGACTCAGCCGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRDSGHV*TQPGLQ
Trigger: CTGGAGACCCGGCTGAGTGCAGACATGGCCACTGTC...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCACTGGGGGAGGAGCTGTaGTTTCGAGTTCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSLGEEL*FRVPLP
Trigger: GGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGAAAAGTCCTTGAGGTaGCTAAGGCCCAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSEKSLR*LRPRAG
Trigger: CCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTC...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCCCACGTGGTTGTCCATaGCTGTCACTTCGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVPRGCP*LSLRPG
Trigger: CCCTGGACGAAGTGACAGCCATGGACAACCACGTGG...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCACCGAGCCCTGCCACGTaGTTGTCCATGGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSPSPAT*LSMAVT
Trigger: AGTGACAGCCATGGACAACCACGTGGCAGGGCTCGG...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCTCTCACGGTCACTGGTaGGCGAAGCCAAGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLSHGHW*AKPRRG
Trigger: ACCCCTTCTTGGCTTCGCCCACCAGTGACCGTGAGA...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CCA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCGAAGGCAGCCCTTGGTaGCCCCTCGGAAGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSEGSPW*PLGRVC
Trigger: GCAAACCCTTCCGAGGGGCCACCAAGGGCTGCCTTC...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp AGCAGAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTCACCAGTGTGTCCCCTaGCGGTGCATGTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SRKVLEVPKAQGRVPPGSHQCVP*RCMCGL
Trigger: AAGACCACACATGCACCGCCAGGGGACACACTGGTG...ACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCGCTGGAGCTGCGGCCTaGGCCCTCATCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFAGAAA*ALILTA
Trigger: AGCAGTGAGGATGAGGGCCCAGGCCGCAGCTCCAGC...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCATCGAGGGAGCTCCTaGTACTGGCGGCCCCGACTG +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFHRGSS*YWRPRL
Trigger: CAGTCGGGGCCGCCAGTACCAGGAGCTCCCTCGATG...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGCAGCGCCTTGATCCCTaGGTGAGCCACGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRQRLDP*VSHVST
Trigger: TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTG...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGGACTGCAGGAGAAGATaGTCCCAAGGGCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRDCRRR*SQGLGE
Trigger: CTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGTC...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAACCAGAGCAGCCCCTaGCATGAAGCCAGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVNQSSP*HEARVV
Trigger: AACCACCCTGGCTTCATGCCAGGGGCTGCTCTGGTT...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330883.9
CDS-3UTR TCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCGTAGGTCACAGTAGGTaGGGGCCCGCACATCCCCGT +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFVGHSR*GPAHPR
Trigger: ACGGGGATGTGCGGGCCCTCACCTACTGTGACCTAC...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCGCTTGCGTTGCCGACTaGAGCCACCCTCTAACTCCG +
Preference number: 4 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSACVAD*SHPLTP
Trigger: CGGAGTTAGAGGGTGGCTTCAGTCGGCAACGCAAGC...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTGCTCCTCACACGCCATaGACTGGGAAACCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPAAPHTP*TGKPEK
Trigger: TTTCTCAGGTTTCCCAGTTCATGGCGTGTGAGGAGC...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCGCCTTGATCCCTGGGTaGGCCACGTGTCCACACTGG +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFALIPG*ATCPHW
Trigger: CCAGTGTGGACACGTGGCTCACCCAGGGATCAAGGC...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGAGTCCATGTGTGGCTaGTCCATGTTGCCGATGGCG +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSESMCG*SMLPMA
Trigger: CGCCATCGGCAACATGGAGCAGCCACACATGGACTC...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCATGTGCAGCCAGCCGATaGGTGAGTCCATGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSCAASR*VSPCVA
Trigger: AGCCACACATGGACTCACGCATCGGCTGGCTGCACA...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAAGGGTTTGCAGTGCTaGAGCAGTGAGCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVKGLQC*SSERFR
Trigger: CCTGAACCGCTCACTGCTGCAGCACTGCAAACCCTT...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCACGGAAGGGTTTGCAGTaGTGCAGCAGTGAGCGGTTC +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSRKGLQ*CSSERF
Trigger: GAACCGCTCACTGCTGCAGCACTGCAAACCCTTCCG...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGCGGAAGGGTTTGCAGTaGTGCAGCAGTGAGCGGTTC +
Preference number: 4 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRRKGLQ*CSSERF
Trigger: GAACCGCTCACTGCTGCAGCACTGCAAACCCTTCCG...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCCTCTAACTCCGTACTaGCGGGGGAGCCCGGGATCA +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFPLTPY*RGSPGS
Trigger: TGATCCCGGGCTCCCCCGGCAGTACGGAGTTAGAGG...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAACTTGCGCTTGCGTTaGCGACTGAAGCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVNLRLR*RLKPPS
Trigger: AGAGGGTGGCTTCAGTCGGCAACGCAAGCGCAAGTT...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp AGCAGAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTGGTTGCAAGTGTCGCTaGTCTTCTCGCAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SRKVLEVPKAQGRVPPGSGCKCR*SSRSPP
Trigger: TGGAGGACTGCGAGAAGAGCAGCGACACTTGCAACC...ACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGCACCAGTGTGTCCCCTaGCGGTGCATGTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRHQCVP*RCMCGL
Trigger: AAGACCACACATGCACCGCCAGGGGACACACTGGTG...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCATTCTTCCCCAGGATaGCCACGACGACGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFHSSPG*PRRRRP
Trigger: GGGGCGACGTCGTCGTGGCCATCCTGGGGAAGAATG...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCAGGCTGGACCAGAAGTaGTCGGAGAACTCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLRLDQK*SENSGY
Trigger: GTACCCTGAGTTCTCCGACCACTTCTGGTCCAGCCT...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTGTTGAGCTGGCGCTaGAGGGCATCCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFLLSWR*RASSLL
Trigger: GAGCAGGCTGGATGCCCTCCAGCGCCAGCTCAACAG...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCAGTACAGCCGCTGGATaGTGGCCGACACGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFSTAAG*WPTRCR
Trigger: TCGGCAACGTGTCGGCCATCATCCAGCGGCTGTACT...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCATGCAGGCTAGCCAGTaGGCGATGAGCGCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSMQASQ*AMSAKV
Trigger: CACCTTTGCGCTCATCGCGCACTGGCTAGCCTGCAT...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCTGCTGTTGTAGGGTTTaGCTATCTGGTCGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLCCCRV*LSGRPG
Trigger: ACCTGGGCGACCAGATAGGCAAACCCTACAACAGCA...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGAAGGGTTTGCAGTGCTaGAGCAGTGAGCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRKGLQC*SSERFR
Trigger: CCTGAACCGCTCACTGCTGCAGCACTGCAAACCCTT...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCACGACTTGCCAGGCCTTaGATACAGGTTCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSRLARP*IQVQRL
Trigger: GAGCCTCTGAACCTGTATGCAAGGCCTGGCAAGTCG...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCCTTGTCCGTGCGCCTaGGGAAGGACAACTTGCGCT +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFPCPCA*GRTTCA
Trigger: AGCGCAAGTTGTCCTTCCGCAGGCGCACGGACAAGG...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCGACAGTGGCCATGTCTaGACTCAGCCGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFDSGHV*TQPGLQ
Trigger: CTGGAGACCCGGCTGAGTGCAGACATGGCCACTGTC...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCATGCCTCTGTAGCAGCTaGAGGACAGTGGCCATGTCT +
Preference number: 4 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSCLCSS*RTVAMS
Trigger: AGACATGGCCACTGTCCTGCAGCTGCTACAGAGGCA...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCGAAAAGTCCTTGAGGTaGCTAAGGCCCAGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFEKSLR*LRPRAG
Trigger: CCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTC...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGCAGGTCGTCCCGATaGATCTTGTGTAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVSRSSR*ILCRSQ
Trigger: CTGTGACCTACACAAGATCCATCGGGACGACCTGCT...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGAGGCTGGACCAGAAGTaGTCGGAGAACTCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRRLDQK*SENSGY
Trigger: GTACCCTGAGTTCTCCGACCACTTCTGGTCCAGCCT...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCGACTGCAGGAGAAGATaGTCCCAAGGGCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFDCRRR*SQGLGE
Trigger: CTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGTC...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCATGAACTGGGAAACCTaGGAAAGCGAGTCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVMNWET*ESESKV
Trigger: CACCTTGGACTCGCTTTCTCAGGTTTCCCAGTTCAT...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCATGAACTGGGAAACCTaGGAAAGCGAGTCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLMNWET*ESESKV
Trigger: CACCTTGGACTCGCTTTCTCAGGTTTCCCAGTTCAT...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCCATCCCCGTTCGACTTaGCAGGCCTTGCATACAGGT +
Preference number: 4 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSHPRST*QALHTG
Trigger: ACCTGTATGCAAGGCCTGGCAAGTCGAACGGGGATG...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCAACTTGCGCTTGCGTTaGCGACTGAAGCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSNLRLR*RLKPPS
Trigger: AGAGGGTGGCTTCAGTCGGCAACGCAAGCGCAAGTT...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGAGCAGGTCGTCCCGATaGATCTTGTGTAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRSRSSR*ILCRSQ
Trigger: CTGTGACCTACACAAGATCCATCGGGACGACCTGCT...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCGACTTGCCAGGCCTTaGATACAGGTTCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFRLARP*IQVQRL
Trigger: GAGCCTCTGAACCTGTATGCAAGGCCTGGCAAGTCG...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCTGCCTCTGTAGCAGCTaGAGGACAGTGGCCATGTCT +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFCLCSS*RTVAMS
Trigger: AGACATGGCCACTGTCCTGCAGCTGCTACAGAGGCA...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCAGATCTTCTCTGAGTTaGTGTTGGGAGAGACGTTGC +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLRSSLS*CWERRC
Trigger: GCAACGTCTCTCCCAACACCAACTCAGAGAAGATCT...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR TCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCGCTCCTCACACGCCATaGACTGGGAAACCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFAPHTP*TGKPEK
Trigger: TTTCTCAGGTTTCCCAGTTCATGGCGTGTGAGGAGC...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCTGCTGTTGTAGGGTTTaGCTATCTGGTCGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFCCCRV*LSGRPG
Trigger: ACCTGGGCGACCAGATAGGCAAACCCTACAACAGCA...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CCA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCATGAACTTACGGCTCTaGCCCTCAAACTTGCGGATG +
Preference number: 4 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSMNLRL*PSNLRM
Trigger: CATCCGCAAGTTTGAGGGCCAGAGCCGTAAGTTCAT...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CCA 90 bp CCAAGGGGAGCGGCCCAGCAGCGCCTTGATCCCTGGGTGAGCCACGTGTCCACATTCTCAGTGACATTGTaGGTTCGCTCCTTTATCTTA +
Preference number: 4 (lower is better)
Translates to: PRGAAQQRLDPWVSHVSTFSVTL*VRSFIL
Trigger: TAAGATAAAGGAGCGAACCCACAATGTCACTGAGAA...TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTGCTGGGCCGCTCCCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CCA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCAAGTTGAGGGTGATTTaGGGAATCTTGCTAATGGTG +
Preference number: 4 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLKLRVI*GILLMV
Trigger: CACCATTAGCAAGATTCCCCAAATCACCCTCAACTT...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CCA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCAGATCTTCTCTGAGTTaGTGTTGGGAGAGACGTTGC +
Preference number: 4 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSRSSLS*CWERRC
Trigger: GCAACGTCTCTCCCAACACCAACTCAGAGAAGATCT...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR GCA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCCTCCTTTATCTTAGGTaGTATGATCTCACGGTCACT +
Preference number: 4 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSLLYLR*YDLTVT
Trigger: AGTGACCGTGAGATCATAGCACCTAAGATAAAGGAG...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS GCA 90 bp CCTGCCTGGCTCGAGCTGCCCATGGCCCCGTGGCGTGGGCCCTGCTaGCAGGGTGCCGTGCTCTGCCCGCCCGCCAGCCCAGCAGCGGCC +
Preference number: 5 (lower is better)
Translates to: PAWLELPMAPWRGPC*QGAVLCPPASPAAA
Trigger: GGCCGCTGCTGGGCTGGCGGGCGGGCAGAGCACGGCACCCTGGCAGCAGGGCCCACGCCACGGGGCCATGGGCAGCTCGAGCCAGGCAGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330883.9
ENST00000461280.2
ENST00000473610.5
CDS GCA 90 bp GCTCGAGCTGCCCATGGCCCCGTGGCGTGGGCCCTGCTGCCAGGGTaGCGTGCTCTGCCCGCCCGCCAGCCCAGCAGCGGCCGCACTCGG +
Preference number: 5 (lower is better)
Translates to: ARAAHGPVAWALLPG*RALPARQPSSGRTR
Trigger: CCGAGTGCGGCCGCTGCTGGGCTGGCGGGCGGGCAGAGCACGGCACCCTGGCAGCAGGGCCCACGCCACGGGGCCATGGGCAGCTCGAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461280.2
ENST00000473610.5
CDS GCA 90 bp CAGCCTGCCTGGCTCGAGCTGCCCATGGCCCCGTGGCGTGGGCCCTaGTGCCAGGGTGCCGTGCTCTGCCCGCCCGCCAGCCCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: QPAWLELPMAPWRGP*CQGAVLCPPASPAA
Trigger: CGCTGCTGGGCTGGCGGGCGGGCAGAGCACGGCACCCTGGCAGCAGGGCCCACGCCACGGGGCCATGGGCAGCTCGAGCCAGGCAGGCTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330883.9
ENST00000461280.2
ENST00000473610.5
CDS CCA 90 bp TGGGCAGCAGCCTGCCTGGCTCGAGCTGCCCATGGCCCCGTGGCGTaGGCCCTGCTGCCAGGGTGCCGTGCTCTGCCCGCCCGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: WAAACLARAAHGPVA*ALLPGCRALPARQP
Trigger: GGGCTGGCGGGCGGGCAGAGCACGGCACCCTGGCAGCAGGGCCCACGCCACGGGGCCATGGGCAGCTCGAGCCAGGCAGGCTGCTGCCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330883.9
ENST00000461280.2
ENST00000473610.5
CDS GCA 90 bp CCCATGGCCCCGTGGCGTGGGCCCTGCTGCCAGGGTGCCGTGCTCTaGCCGCCCGCCAGCCCAGCAGCGGCCGCACTCGGAACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: PMAPWRGPCCQGAVL*PPASPAAAALGTSA
Trigger: AGCTGAGGTTCCGAGTGCGGCCGCTGCTGGGCTGGCGGGCGGGCAGAGCACGGCACCCTGGCAGCAGGGCCCACGCCACGGGGCCATGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461280.2
ENST00000473610.5
CDS CCA 90 bp AAGCGTGGGCAGCAGCCTGCCTGGCTCGAGCTGCCCATGGCCCCGTaGCGTGGGCCCTGCTGCCAGGGTGCCGTGCTCTGCCCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: KRGQQPAWLELPMAP*RGPCCQGAVLCPPA
Trigger: GGCGGGCGGGCAGAGCACGGCACCCTGGCAGCAGGGCCCACGCCACGGGGCCATGGGCAGCTCGAGCCAGGCAGGCTGCTGCCCACGCTT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330883.9
ENST00000461280.2
ENST00000473610.5
CDS GCA 90 bp CCGGTAGAAGGCGATTTCCACTTTGCGCTCCTCGGCGCCCAGCAGTaGCTGCGCGATCTGCGCGGCAGCGCGGCGCTGCGTGCGCGGCCC +
Preference number: 5 (lower is better)
Translates to: PVEGDFHFALLGAQQ*LRDLRGSAALRARP
Trigger: GGGCCGCGCACGCAGCGCCGCGCTGCCGCGCAGATCGCGCAGGCACTGCTGGGCGCCGAGGAGCGCAAAGTGGAAATCGCCTTCTACCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000532957.5
CDS GCA 90 bp GTCACCCTGGCAGTAAGCGTGGGCAGCAGCCTGCCTGGCTCGAGCTaGCCATGGCCCCGTGGCGTGGGCCCTGCTGCCAGGGTGCCGTGC +
Preference number: 5 (lower is better)
Translates to: VTLAVSVGSSLPGSS*PWPRGVGPAARVPC
Trigger: GCACGGCACCCTGGCAGCAGGGCCCACGCCACGGGGCCATGGGCAGCTCGAGCCAGGCAGGCTGCTGCCCACGCTTACTGCCAGGGTGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330883.9
ENST00000461280.2
ENST00000473610.5
CDS CCA 90 bp GGTTGTCCATGGCTGTCACTTCGTCCAGGGCCAGCGACTCGCTGCTaGGTGCCGCGGGCGTCAGGTCCACGTCCACCACCACGGCCCCCG +
Preference number: 5 (lower is better)
Translates to: GCPWLSLRPGPATRC*VPRASGPRPPPRPP
Trigger: CGGGGGCCGTGGTGGTGGACGTGGACCTGACGCCCGCGGCACCCAGCAGCGAGTCGCTGGCCCTGGACGAAGTGACAGCCATGGACAACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000532957.5
ENST00000684241.1
CDS GCA 90 bp CGTGGTTGTCCATGGCTGTCACTTCGTCCAGGGCCAGCGACTCGCTaGTGGGTGCCGCGGGCGTCAGGTCCACGTCCACCACCACGGCCC +
Preference number: 5 (lower is better)
Translates to: RGCPWLSLRPGPATR*WVPRASGPRPPPRP
Trigger: GGGCCGTGGTGGTGGACGTGGACCTGACGCCCGCGGCACCCAGCAGCGAGTCGCTGGCCCTGGACGAAGTGACAGCCATGGACAACCACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000532957.5
ENST00000684241.1
CDS-3UTR CAA 90 bp CCAAGGGGAGCGGCCCAGCAGCGCCTTGATCCCTGGGTGAGCCACGTGTCCACAGCCCGAAGGCAGCCCTaGGTGGCCCCTCGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: PRGAAQQRLDPWVSHVSTARRQP*VAPRKG
Trigger: ACCCTTCCGAGGGGCCACCAAGGGCTGCCTTCGGGC...TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTGCTGGGCCGCTCCCCTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCTTCAGGCGGAAGGTCTaGGCGCGGCCTGGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RCLRPRAGCLRAVRPANAFRRKV*ARPGAS
Trigger: GCTGGCCCCAGGCCGCGCCAAGACCTTCCGCCTGAA...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CAA 90 bp CCAAGGGGAGCGGCCCAGCAGCGCCTTGATCCCTGGGTGAGCCACGTGTCCACAGGCTGCTCCGTGTCCTaGTCCGTGCGCCTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: PRGAAQQRLDPWVSHVSTGCSVS*SVRLRK
Trigger: CTTCCGCAGGCGCACGGACAAGGACACGGAGCAGCC...TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTGCTGGGCCGCTCCCCTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCGCCCGAAGGCAGCCCTaGGTGGCCCCTCGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVARRQP*VAPRKG
Trigger: ACCCTTCCGAGGGGCCACCAAGGGCTGCCTTCGGGC...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCGGCTGCTCCGTGTCCTaGTCCGTGCGCCTGCGGAAG +
Preference number: 5 (lower is better)
Translates to: RCLRPRAGCLRAVRPANAGCSVS*SVRLRK
Trigger: CTTCCGCAGGCGCACGGACAAGGACACGGAGCAGCC...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTCGGGTCTCCAGCCTGTaGAGCTGGCGCTGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPARVSSL*SWRWRA
Trigger: TGCCCTCCAGCGCCAGCTCAACAGGCTGGAGACCCG...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCGGGTCTCCAGCCTGTaGAGCTGGCGCTGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLRVSSL*SWRWRA
Trigger: TGCCCTCCAGCGCCAGCTCAACAGGCTGGAGACCCG...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS GCA 90 bp GCCACGCAGGATGGACCCTGGAACCCAAGTGGGCCCGTCCACTTCTaGCTCCCCGTATGGCCCTTCCTCTCCGGGATCTCCCGTCCTGAT +
Preference number: 5 (lower is better)
Translates to: ATQDGPWNPSGPVHF*LPVWPFLSGISRPD
Trigger: ATCAGGACGGGAGATCCCGGAGAGGAAGGGCCATACGGGGAGGCAGAAGTGGACGGGCCCACTTGGGTTCCAGGGTCCATCCTGCGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684241.1
CDS CCA 90 bp GTGGGCAGAGCAGAAAGCCACGCAGGATGGACCCTGGAACCCAAGTaGGCCCGTCCACTTCTGCCTCCCCGTATGGCCCTTCCTCTCCGG +
Preference number: 5 (lower is better)
Translates to: VGRAESHAGWTLEPK*ARPLLPPRMALPLR
Trigger: CCGGAGAGGAAGGGCCATACGGGGAGGCAGAAGTGGACGGGCCCACTTGGGTTCCAGGGTCCATCCTGCGTGGCTTTCTGCTCTGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684241.1
CDS-3UTR CAA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCGCGGTGCCTGCAGCTaGTACTCAGGCAGCACGTCG +
Preference number: 5 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLRGACS*YSGSTS
Trigger: CGACGTGCTGCCTGAGTACAAGCTGCAGGCACCGCG...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp TCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTATCTGGTCGCCCAGGTaGTGCAGCCAGCCGATGCGT +
Preference number: 5 (lower is better)
Translates to: SLRCLRPRAGCLRAVRPAIWSPR*CSQPMR
Trigger: ACGCATCGGCTGGCTGCACAACCTGGGCGACCAGAT...AGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS TCA 90 bp TGTCCGTGCGCCTGCGGAAGGACAACTTGCGCTTGCGTTGCCGACTaGAGCCACCCTCTAACTCCGTACTGCCGGGGGAGCCCGGGATCA +
Preference number: 5 (lower is better)
Translates to: CPCACGRTTCACVAD*SHPLTPYCRGSPGS
Trigger: TGATCCCGGGCTCCCCCGGCAGTACGGAGTTAGAGGGTGGCTTCAGTCGGCAACGCAAGCGCAAGTTGTCCTTCCGCAGGCGCACGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000330883.9
ENST00000684241.1
CDS GCA 90 bp GTGTCCTTGTCCGTGCGCCTGCGGAAGGACAACTTGCGCTTGCGTTaGCGACTGAAGCCACCCTCTAACTCCGTACTGCCGGGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: VSLSVRLRKDNLRLR*RLKPPSNSVLPGEP
Trigger: GGGCTCCCCCGGCAGTACGGAGTTAGAGGGTGGCTTCAGTCGGCAACGCAAGCGCAAGTTGTCCTTCCGCAGGCGCACGGACAAGGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000330883.9
ENST00000684241.1
CDS GCA 90 bp GCTCAGGCCCCGCACCAGGTCAGTGTCTCAGTCTCAGCGTCGACATaGCCACGAGACGCCCTTGTACATCTGCGCTCCAGCACACCCCAC +
Preference number: 5 (lower is better)
Translates to: AQAPHQVSVSVSAST*PRDALVHLRSSTPH
Trigger: GTGGGGTGTGCTGGAGCGCAGATGTACAAGGGCGTCTCGTGGGCATGTCGACGCTGAGACTGAGACACTGACCTGGTGCGGGGCCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473610.5
CDS-3UTR CAA 90 bp AGCAGAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTAAGGCGATTTCCACTTaGCGCTCCTCGGCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SRKVLEVPKAQGRVPPGSKAIST*RSSAPS
Trigger: GCTGGGCGCCGAGGAGCGCAAAGTGGAAATCGCCTT...ACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CAA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCACGCGGTGCCTGCAGCTaGTACTCAGGCAGCACGTCG +
Preference number: 5 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSRGACS*YSGSTS
Trigger: CGACGTGCTGCCTGAGTACAAGCTGCAGGCACCGCG...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCATCTGGTCGCCCAGGTaGTGCAGCCAGCCGATGCGT +
Preference number: 5 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVIWSPR*CSQPMR
Trigger: ACGCATCGGCTGGCTGCACAACCTGGGCGACCAGAT...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCCAACTTGCGCTTGCGTaGCCGACTGAAGCCACCCTC +
Preference number: 5 (lower is better)
Translates to: RCLRPRAGCLRAVRPANAQLALA*PTEATL
Trigger: GAGGGTGGCTTCAGTCGGCAACGCAAGCGCAAGTTG...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCGCGCCTGACAGGGGGTaGCAAGTGTCGCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLAPDRG*QVSLLF
Trigger: GAAGAGCAGCGACACTTGCAACCCCCTGTCAGGCGC...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGCCCTGCCACGTGGTaGTCCATGGCTGTCACTTCG +
Preference number: 5 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVSPATW*SMAVTS
Trigger: CGAAGTGACAGCCATGGACAACCACGTGGCAGGGCT...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CAA 90 bp CCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCGTCACATACTTGTCCTaGATGGAGGGGCCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PKGWGRSCAFEFLSPSTVVTYLS*MEGPPR
Trigger: CCTGGGCGGCCCCTCCATCAAGGACAAGTATGTGAC...GACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCGTCACATACTTGTCCTaGATGGAGGGGCCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLVTYLS*MEGPPR
Trigger: CCTGGGCGGCCCCTCCATCAAGGACAAGTATGTGAC...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCAGCGCCGTCACATACTaGTCCTTGATGGAGGGGCCG +
Preference number: 5 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLSAVTY*SLMEGP
Trigger: CGGCCCCTCCATCAAGGACAAGTATGTGACGGCGCT...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp CCAAGGGGAGCGGCCCAGCAGCGCCTTGATCCCTGGGTGAGCCACGTGTCCACATCGACTTGCCAGGCCTaGCATACAGGTTCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: PRGAAQQRLDPWVSHVSTSTCQA*HTGSEA
Trigger: AGCCTCTGAACCTGTATGCAAGGCCTGGCAAGTCGA...TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTGCTGGGCCGCTCCCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS GCA 90 bp ATAGGAAGCAGCTCCCATCTTTCCGGTAGAAGGCGATTTCCACTTTaGGCTCCTCGGCGCCCAGCAGTGCCTGCGCGATCTGCGCGGCAG +
Preference number: 5 (lower is better)
Translates to: IGSSSHLSGRRRFPL*APRRPAVPARSARQ
Trigger: CTGCCGCGCAGATCGCGCAGGCACTGCTGGGCGCCGAGGAGCGCAAAGTGGAAATCGCCTTCTACCGGAAAGATGGGAGCTGCTTCCTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000532957.5
CDS CCA 90 bp CTCCCTGCAGAGTGGGAGGACATAGCCCCCTTGGCACCCACTCAGTaGGCAGAGCAGAAAGCCACGCAGGATGGACCCTGGAACCCAAGT +
Preference number: 5 (lower is better)
Translates to: LPAEWEDIAPLAPTQ*AEQKATQDGPWNPS
Trigger: ACTTGGGTTCCAGGGTCCATCCTGCGTGGCTTTCTGCTCTGCCCACTGAGTGGGTGCCAAGGGGGCTATGTCCTCCCACTCTGCAGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684241.1
CDS-3UTR CAA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCGAGTCCGAGGTGGAGTaGAGCAAGCCGCTGCGCAGT +
Preference number: 5 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSESEVE*SKPLRS
Trigger: ACTGCGCAGCGGCTTGCTCAACTCCACCTCGGACTC...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CAA 90 bp CCAAGGGGAGCGGCCCAGCAGCGCCTTGATCCCTGGGTGAGCCACGTGTCCACATTCTCTGAGTTGGTGTaGGGAGAGACGTTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: PRGAAQQRLDPWVSHVSTFSELV*GETLPK
Trigger: CTTCGGCAACGTCTCTCCCAACACCAACTCAGAGAA...TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTGCTGGGCCGCTCCCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp CCAAGGGGAGCGGCCCAGCAGCGCCTTGATCCCTGGGTGAGCCACGTGTCCACATTGGTATCTCGCAGGTaGAAGGTGATCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PRGAAQQRLDPWVSHVSTLVSRR*KVISRL
Trigger: CAGCCTGGAGATCACCTTCAACCTGCGAGATACCAA...TGTGGACACGTGGCTCACCCAGGGATCAAGGCGCTGCTGGGCCGCTCCCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCACAACTTGCGCTTGCGTaGCCGACTGAAGCCACCCTC +
Preference number: 5 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSQLALA*PTEATL
Trigger: GAGGGTGGCTTCAGTCGGCAACGCAAGCGCAAGTTG...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCACTGCGGAAGGACAACTaGCGCTTGCGTTGCCGACTG +
Preference number: 5 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSLRKDN*RLRCRL
Trigger: CAGTCGGCAACGCAAGCGCAAGTTGTCCTTCCGCAG...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCGCGCCTGACAGGGGGTaGCAAGTGTCGCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSAPDRG*QVSLLF
Trigger: GAAGAGCAGCGACACTTGCAACCCCCTGTCAGGCGC...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCAGCGCCGTCACATACTaGTCCTTGATGGAGGGGCCG +
Preference number: 5 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSSAVTY*SLMEGP
Trigger: CGGCCCCTCCATCAAGGACAAGTATGTGACGGCGCT...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAACATCCCCGTTCGACTaGCCAGGCCTTGCATACAGG +
Preference number: 5 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSTSPFD*PGLAYR
Trigger: CCTGTATGCAAGGCCTGGCAAGTCGAACGGGGATGT...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp AGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTAGACCAGCTAATGCCATAGCAGAAAAGTCCTaGAGGTGCCTAAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: RCLRPRAGCLRAVRPANAIAEKS*RCLRPR
Trigger: CCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCTAT...GGCATTAGCTGGTCTAACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS GCA 90 bp GCCTCCAGGGTCCTTACTACTGACTGTGACCGCCTGAGACTTGTTTaGTGTGCCAAGAGGTTCCCCTCTGCCACCCCACTCTTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: ASRVLTTDCDRLRLV*CAKRFPSATPLFPA
Trigger: GGCTGGGAAGAGTGGGGTGGCAGAGGGGAACCTCTTGGCACAGCAAACAAGTCTCAGGCGGTCACAGTCAGTAGTAAGGACCCTGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683359.1
CDS-3UTR CAA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGTTCTCCACCCGAGCGTaGGCGATGATGAACTTACGG +
Preference number: 5 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRFSTRA*AMMNLR
Trigger: CCGTAAGTTCATCATCGCCAACGCTCGGGTGGAGAA...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CAA 90 bp GAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCCTGAGCAGGAAGAAGGGGTCGCCCTaGAGGTCCACAAAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: ELCFRVPLPFHGQGLLSRKKGSP*RSTKLR
Trigger: CCTCAACTTTGTGGACCTCAAGGGCGACCCCTTCTT...CCTGCTCAGGAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CAA 90 bp CTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCACATCCCCGTTCGACTaGCCAGGCCTTGCATACAGG +
Preference number: 5 (lower is better)
Translates to: LQEKMVPRAGGGAVLSSSTSPFD*PGLAYR
Trigger: CCTGTATGCAAGGCCTGGCAAGTCGAACGGGGATGT...GGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp AGCAGAAAAGTCCTTGAGGTGCCTAAGGCCCAGGGCCGGGTGCCTCCGGGCAGTTTGGTATCTCGCAGGTaGAAGGTGATCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SRKVLEVPKAQGRVPPGSLVSRR*KVISRL
Trigger: CAGCCTGGAGATCACCTTCAACCTGCGAGATACCAA...ACTGCCCGGAGGCACCCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAAAGGACAACTTGCGCTaGCGTTGCCGACTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSKDNLR*RCRLKP
Trigger: TGGCTTCAGTCGGCAACGCAAGCGCAAGTTGTCCTT...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTGCGGAAGGACAACTaGCGCTTGCGTTGCCGACTG +
Preference number: 5 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFLRKDN*RLRCRL
Trigger: CAGTCGGCAACGCAAGCGCAAGTTGTCCTTCCGCAG...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp CTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAGGGCCTCATAGCAGAAAAGTCCTaGAGGTGCCTAAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LGEELCFRVPLPFHGQGLIAEKS*RCLRPR
Trigger: CCTGGGCCTTAGGCACCTCAAGGACTTTTCTGCTAT...GAGGCCCTGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCATTCTCTGAGTTGGTGTaGGGAGAGACGTTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSFSELV*GETLPK
Trigger: CTTCGGCAACGTCTCTCCCAACACCAACTCAGAGAA...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCTCGACTTGCCAGGCCTaGCATACAGGTTCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFSTCQA*HTGSEA
Trigger: AGCCTCTGAACCTGTATGCAAGGCCTGGCAAGTCGA...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000330883.9
CDS-3UTR CAA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCATTGAGGTCCACAAAGTaGAGGGTGATTTGGGGAATC +
Preference number: 5 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSLRSTK*RVIWGI
Trigger: GATTCCCCAAATCACCCTCAACTTTGTGGACCTCAA...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS CCA 90 bp TCGGCGCCCAGGGACAGGACCTGGGTGACCTTCTCAGTGACATTGTaGGTTCGCTCCTTTATCTTAGGTGCTATGATCTCACGGTCACTG +
Preference number: 5 (lower is better)
Translates to: SAPRDRTWVTFSVTL*VRSFILGAMISRSL
Trigger: CAGTGACCGTGAGATCATAGCACCTAAGATAAAGGAGCGAACCCACAATGTCACTGAGAAGGTCACCCAGGTCCTGTCCCTGGGCGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000532957.5
ENST00000684241.1
CDS GCA 90 bp AGGCATGAGGCTGCAGGGAACCACATGGCCCTTAGTGAAACCAAATaGCGAGCTTCCAGGCTAGCATTTCTTCCTCTACTGCCCAGGCTA +
Preference number: 5 (lower is better)
Translates to: RHEAAGNHMALSETK*RASRLAFLPLLPRL
Trigger: TAGCCTGGGCAGTAGAGGAAGAAATGCTAGCCTGGAAGCTCGGCATTTGGTTTCACTAAGGGCCATGTGGTTCCCTGCAGCCTCATGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461280.2
ENST00000473610.5
ENST00000532957.5
CDS-3UTR CAA 90 bp CCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCCTCTCCCCTTCCACGGTCAAAAGTTGAGGGTGATTaGGGGAATCTTGCTAATGGT +
Preference number: 5 (lower is better)
Translates to: PRAGGGAVLSSSSPLPRSKVEGD*GNLANG
Trigger: ACCATTAGCAAGATTCCCCAAATCACCCTCAACTTT...TGACCGTGGAAGGGGAGAGGAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS-3UTR CAA 90 bp ACTGCAGGAGAAGATGGTCCCAAGGGCTGGGGGAGGAGCTGTGCTTTCGAGTTCACCTTCTCAGTGACATaGTGGGTTCGCTCCTTTATC +
Preference number: 5 (lower is better)
Translates to: TAGEDGPKGWGRSCAFEFTFSVT*WVRSFI
Trigger: GATAAAGGAGCGAACCCACAATGTCACTGAGAAGGT...GAACTCGAAAGCACAGCTCCTCCCCCAGCCCTTGGGACCATCTTCTCCTGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262186.10
CDS TCA 90 bp ATTAGCACCAGCCGTTGTGTCAGCACACAAGATAAGGACAGACGTTaGGAGCAAGAATTTCAAAAACTTTACAGCAATTTGGCATCACCA +
Preference number: 5 (lower is better)
Translates to: ISTSRCVSTQDKDRR*EQEFQKLYSNLASP
Trigger: TGGTGATGCCAAATTGCTGTAAAGTTTTTGAAATTCTTGCTCTCAACGTCTGTCCTTATCTTGTGTGCTGACACAACGGCTGGTGCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684241.1
CDS CCA 90 bp AGGACAGACGTTGAGAGCAAGAATTTCAAAAACTTTACAGCAATTTaGCATCACCACAAAATCCACGCATGTGCTCTTGTATTTCACAGA +
Preference number: 5 (lower is better)
Translates to: RTDVESKNFKNFTAI*HHHKIHACALVFHR
Trigger: TCTGTGAAATACAAGAGCACATGCGTGGATTTTGTGGTGATGCCAAATTGCTGTAAAGTTTTTGAAATTCTTGCTCTCAACGTCTGTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684241.1
CDS GCA 72 bp CCGTGGCGTGGGCCCTGCTGCCAGGGTGCCGTGCTCTaGCCGCCCGCCAGCCCAGCAGCGGCCGCACTCGGA +
Preference number: 6 (lower is better)
Translates to: PWRGPCCQGAVL*PPASPAAAALG
Trigger: TCCGAGTGCGGCCGCTGCTGGGCTGGCGGGCGGGCAGAGCACGGCACCCTGGCAGCAGGGCCCACGCCACGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461280.2
ENST00000473610.5
CDS GCA 72 bp CTCGAGCTGCCCATGGCCCCGTGGCGTGGGCCCTGCTaGCAGGGTGCCGTGCTCTGCCCGCCCGCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: LELPMAPWRGPC*QGAVLCPPASP
Trigger: TGGGCTGGCGGGCGGGCAGAGCACGGCACCCTGGCAGCAGGGCCCACGCCACGGGGCCATGGGCAGCTCGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330883.9
ENST00000461280.2
ENST00000473610.5
CDS GCA 72 bp TGGCTCGAGCTGCCCATGGCCCCGTGGCGTGGGCCCTaGTGCCAGGGTGCCGTGCTCTGCCCGCCCGCCAGC +
Preference number: 6 (lower is better)
Translates to: WLELPMAPWRGP*CQGAVLCPPAS
Trigger: GCTGGCGGGCGGGCAGAGCACGGCACCCTGGCAGCAGGGCCCACGCCACGGGGCCATGGGCAGCTCGAGCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330883.9
ENST00000461280.2
ENST00000473610.5
CDS CCA 72 bp GCCTGCCTGGCTCGAGCTGCCCATGGCCCCGTGGCGTaGGCCCTGCTGCCAGGGTGCCGTGCTCTGCCCGCC +
Preference number: 6 (lower is better)
Translates to: ACLARAAHGPVA*ALLPGCRALPA
Trigger: GGCGGGCAGAGCACGGCACCCTGGCAGCAGGGCCCACGCCACGGGGCCATGGGCAGCTCGAGCCAGGCAGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330883.9
ENST00000461280.2
ENST00000473610.5
CDS CCA 72 bp CCTCGATGTCGTCGGCCGACGAGGCGCGGCGCACGCTaGCGCAGCTTTCTCGGGAGCGCGTCCGGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: PRCRRPTRRGAR*RSFLGSASGPG
Trigger: GCCTGGCCCGGACGCGCTCCCGAGAAAGCTGCGCCAGCGTGCGCCGCGCCTCGTCGGCCGACGACATCGAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000532957.5
ENST00000684241.1
CDS CCA 72 bp CAGCAGCCTGCCTGGCTCGAGCTGCCCATGGCCCCGTaGCGTGGGCCCTGCTGCCAGGGTGCCGTGCTCTGC +
Preference number: 6 (lower is better)
Translates to: QQPAWLELPMAP*RGPCCQGAVLC
Trigger: GCAGAGCACGGCACCCTGGCAGCAGGGCCCACGCCACGGGGCCATGGGCAGCTCGAGCCAGGCAGGCTGCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330883.9
ENST00000461280.2
ENST00000473610.5
CDS GCA 72 bp GCAGTAAGCGTGGGCAGCAGCCTGCCTGGCTCGAGCTaGCCATGGCCCCGTGGCGTGGGCCCTGCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: AVSVGSSLPGSS*PWPRGVGPAAR
Trigger: CCTGGCAGCAGGGCCCACGCCACGGGGCCATGGGCAGCTCGAGCCAGGCAGGCTGCTGCCCACGCTTACTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330883.9
ENST00000461280.2
ENST00000473610.5
CDS GCA 72 bp GGCGATTTCCACTTTGCGCTCCTCGGCGCCCAGCAGTaGCTGCGCGATCTGCGCGGCAGCGCGGCGCTGCGT +
Preference number: 6 (lower is better)
Translates to: GDFHFALLGAQQ*LRDLRGSAALR
Trigger: ACGCAGCGCCGCGCTGCCGCGCAGATCGCGCAGGCACTGCTGGGCGCCGAGGAGCGCAAAGTGGAAATCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000532957.5
CDS CCA 72 bp GCACGCCGCTCCTCCGCGGGCCCGAGCCCTGCCACGTaGTTGTCCATGGCTGTCACTTCGTCCAGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: ARRSSAGPSPAT*LSMAVTSSRAS
Trigger: GCTGGCCCTGGACGAAGTGACAGCCATGGACAACCACGTGGCAGGGCTCGGGCCCGCGGAGGAGCGGCGTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000532957.5
ENST00000684241.1
CDS CCA 72 bp GGAGTCCGAGGTGGAGTTGAGCAAGCCGCTGCGCAGTaGGTGCATGGCCCCGGTGCTGGCGTGGCGCGGTGG +
Preference number: 6 (lower is better)
Translates to: GVRGGVEQAAAQ*VHGPGAGVARW
Trigger: CCACCGCGCCACGCCAGCACCGGGGCCATGCACCCACTGCGCAGCGGCTTGCTCAACTCCACCTCGGACTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000532957.5
ENST00000684241.1
CDS CAA 72 bp CGCCGCTCCTCCGCGGGCCCGAGCCCTGCCACGTGGTaGTCCATGGCTGTCACTTCGTCCAGGGCCAGCGAC +
Preference number: 6 (lower is better)
Translates to: RRSSAGPSPATW*SMAVTSSRASD
Trigger: GTCGCTGGCCCTGGACGAAGTGACAGCCATGGACAACCACGTGGCAGGGCTCGGGCCCGCGGAGGAGCGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000532957.5
ENST00000684241.1
CDS CAA 90 bp CAGGGCCTCACTCTGGCCCGGCTAGCAGCCTCAGTTTCCTCCAACTaGGGTTCCTCCACCGTGGGCTCTCCCCGCCGCCCGCCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: QGLTLARLAASVSSN*GSSTVGSPRRPPLG
Trigger: GCCCAGGGGCGGGCGGCGGGGAGAGCCCACGGTGGAGGAACCCAAGTTGGAGGAAACTGAGGCTGCTAGCCGGGCCAGAGTGAGGCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473610.5
CDS CCA 72 bp CCTCCGCGGGCCCGAGCCCTGCCACGTGGTTGTCCATaGCTGTCACTTCGTCCAGGGCCAGCGACTCGCTGC +
Preference number: 6 (lower is better)
Translates to: PPRARALPRGCP*LSLRPGPATRC
Trigger: GCAGCGAGTCGCTGGCCCTGGACGAAGTGACAGCCATGGACAACCACGTGGCAGGGCTCGGGCCCGCGGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000532957.5
ENST00000684241.1
CDS CCA 72 bp GCACTCAGCCGGGTCTCCAGCCTGTTGAGCTGGCGCTaGAGGGCATCCAGCCTGCTCTCCACGTCGCCCCGG +
Preference number: 6 (lower is better)
Translates to: ALSRVSSLLSWR*RASSLLSTSPR
Trigger: CCGGGGCGACGTGGAGAGCAGGCTGGATGCCCTCCAGCGCCAGCTCAACAGGCTGGAGACCCGGCTGAGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000330883.9
ENST00000684241.1
CDS TCA 72 bp TGCGGTAGCGCACGAGGTCGGAGTCCGAGGTGGAGTTaGGCAAGCCGCTGCGCAGTGGGTGCATGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: CGSARGRSPRWS*ASRCAVGAWPR
Trigger: CCGGGGCCATGCACCCACTGCGCAGCGGCTTGCTCAACTCCACCTCGGACTCCGACCTCGTGCGCTACCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000532957.5
ENST00000684241.1
CDS CCA 72 bp TGGCTGTCACTTCGTCCAGGGCCAGCGACTCGCTGCTaGGTGCCGCGGGCGTCAGGTCCACGTCCACCACCA +
Preference number: 6 (lower is better)
Translates to: WLSLRPGPATRC*VPRASGPRPPP
Trigger: TGGTGGTGGACGTGGACCTGACGCCCGCGGCACCCAGCAGCGAGTCGCTGGCCCTGGACGAAGTGACAGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000532957.5
ENST00000684241.1
CDS CCA 72 bp CAGCAGCAGTCCCAGCCCAGGCTGCACCCCCGAGGCTaGCCGACTGGCAACCAGAGCAGCCCCTGGCATGAA +
Preference number: 6 (lower is better)
Translates to: QQQSQPRLHPRG*PTGNQSSPWHE
Trigger: TTCATGCCAGGGGCTGCTCTGGTTGCCAGTCGGCCAGCCTCGGGGGTGCAGCCTGGGCTGGGACTGCTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330883.9
ENST00000461280.2
ENST00000473610.5
CDS TCA 72 bp CCCCGTATGGCCCTTCCTCTCCGGGATCTCCCGTCCTaGTCCCCCACCCGGCCATGTGCCTGCCGCCCTTAT +
Preference number: 6 (lower is better)
Translates to: PRMALPLRDLPS*SPTRPCACRPY
Trigger: ATAAGGGCGGCAGGCACATGGCCGGGTGGGGGATCAGGACGGGAGATCCCGGAGAGGAAGGGCCATACGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684241.1
CDS CAA 72 bp ACTCTGGCCCGGCTAGCAGCCTCAGTTTCCTCCAACTaGGGTTCCTCCACCGTGGGCTCTCCCCGCCGCCCG +
Preference number: 6 (lower is better)
Translates to: TLARLAASVSSN*GSSTVGSPRRP
Trigger: CGGGCGGCGGGGAGAGCCCACGGTGGAGGAACCCAAGTTGGAGGAAACTGAGGCTGCTAGCCGGGCCAGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473610.5
CDS GCA 72 bp GATGGACCCTGGAACCCAAGTGGGCCCGTCCACTTCTaGCTCCCCGTATGGCCCTTCCTCTCCGGGATCTCC +
Preference number: 6 (lower is better)
Translates to: DGPWNPSGPVHF*LPVWPFLSGIS
Trigger: GGAGATCCCGGAGAGGAAGGGCCATACGGGGAGGCAGAAGTGGACGGGCCCACTTGGGTTCCAGGGTCCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684241.1
CDS TCA 72 bp GCCTGCGGAAGGACAACTTGCGCTTGCGTTGCCGACTaGAGCCACCCTCTAACTCCGTACTGCCGGGGGAGC +
Preference number: 6 (lower is better)
Translates to: ACGRTTCACVAD*SHPLTPYCRGS
Trigger: GCTCCCCCGGCAGTACGGAGTTAGAGGGTGGCTTCAGTCGGCAACGCAAGCGCAAGTTGTCCTTCCGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000330883.9
ENST00000684241.1
CDS CCA 72 bp GAGTGGGAGGACATAGCCCCCTTGGCACCCACTCAGTaGGCAGAGCAGAAAGCCACGCAGGATGGACCCTGG +
Preference number: 6 (lower is better)
Translates to: EWEDIAPLAPTQ*AEQKATQDGPW
Trigger: CCAGGGTCCATCCTGCGTGGCTTTCTGCTCTGCCCACTGAGTGGGTGCCAAGGGGGCTATGTCCTCCCACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684241.1
CDS CAA 90 bp TGCTCCGTGTCCTTGTCCGTGCGCCTGCGGAAGGACAACTTGCGCTaGCGTTGCCGACTGAAGCCACCCTCTAACTCCGTACTGCCGGGG +
Preference number: 6 (lower is better)
Translates to: CSVSLSVRLRKDNLR*RCRLKPPSNSVLPG
Trigger: CCCCGGCAGTACGGAGTTAGAGGGTGGCTTCAGTCGGCAACGCAAGCGCAAGTTGTCCTTCCGCAGGCGCACGGACAAGGACACGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000330883.9
ENST00000684241.1
CDS CAA 90 bp CCTGGCTGCTCCGTGTCCTTGTCCGTGCGCCTGCGGAAGGACAACTaGCGCTTGCGTTGCCGACTGAAGCCACCCTCTAACTCCGTACTG +
Preference number: 6 (lower is better)
Translates to: PGCSVSLSVRLRKDN*RLRCRLKPPSNSVL
Trigger: CAGTACGGAGTTAGAGGGTGGCTTCAGTCGGCAACGCAAGCGCAAGTTGTCCTTCCGCAGGCGCACGGACAAGGACACGGAGCAGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000330883.9
ENST00000684241.1
CDS GCA 72 bp TCCGTGCGCCTGCGGAAGGACAACTTGCGCTTGCGTTaGCGACTGAAGCCACCCTCTAACTCCGTACTGCCG +
Preference number: 6 (lower is better)
Translates to: SVRLRKDNLRLR*RLKPPSNSVLP
Trigger: CGGCAGTACGGAGTTAGAGGGTGGCTTCAGTCGGCAACGCAAGCGCAAGTTGTCCTTCCGCAGGCGCACGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000330883.9
ENST00000684241.1
CDS GCA 72 bp CCGCACCAGGTCAGTGTCTCAGTCTCAGCGTCGACATaGCCACGAGACGCCCTTGTACATCTGCGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: PHQVSVSVSAST*PRDALVHLRSS
Trigger: GCTGGAGCGCAGATGTACAAGGGCGTCTCGTGGGCATGTCGACGCTGAGACTGAGACACTGACCTGGTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473610.5
CDS GCA 72 bp AGCTCCCATCTTTCCGGTAGAAGGCGATTTCCACTTTaGGCTCCTCGGCGCCCAGCAGTGCCTGCGCGATCT +
Preference number: 6 (lower is better)
Translates to: SSHLSGRRRFPL*APRRPAVPARS
Trigger: AGATCGCGCAGGCACTGCTGGGCGCCGAGGAGCGCAAAGTGGAAATCGCCTTCTACCGGAAAGATGGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262186.10
ENST00000532957.5
CDS CAA 72 bp TCCGTGTCCTTGTCCGTGCGCCTGCGGAAGGACAACTaGCGCTTGCGTTGCCGACTGAAGCCACCCTCTAAC +
Preference number: 6 (lower is better)
Translates to: SVSLSVRLRKDN*RLRCRLKPPSN
Trigger: GTTAGAGGGTGGCTTCAGTCGGCAACGCAAGCGCAAGTTGTCCTTCCGCAGGCGCACGGACAAGGACACGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000330883.9
ENST00000684241.1
CDS CAA 72 bp TCTCAGTCTCAGCGTCGACATGCCCACGAGACGCCCTaGTACATCTGCGCTCCAGCACACCCCACCCTTCAG +
Preference number: 6 (lower is better)
Translates to: SQSQRRHAHETP*YICAPAHPTLQ
Trigger: CTGAAGGGTGGGGTGTGCTGGAGCGCAGATGTACAAGGGCGTCTCGTGGGCATGTCGACGCTGAGACTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473610.5
CDS CCA 72 bp ACATCCACCAGACATAGGAAGCAGCTCCCTGCAGAGTaGGAGGACATAGCCCCCTTGGCACCCACTCAGTGG +
Preference number: 6 (lower is better)
Translates to: TSTRHRKQLPAE*EDIAPLAPTQW
Trigger: CCACTGAGTGGGTGCCAAGGGGGCTATGTCCTCCCACTCTGCAGGGAGCTGCTTCCTATGTCTGGTGGATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684241.1
CDS CAA 72 bp TCCTTGTCCGTGCGCCTGCGGAAGGACAACTTGCGCTaGCGTTGCCGACTGAAGCCACCCTCTAACTCCGTA +
Preference number: 6 (lower is better)
Translates to: SLSVRLRKDNLR*RCRLKPPSNSV
Trigger: TACGGAGTTAGAGGGTGGCTTCAGTCGGCAACGCAAGCGCAAGTTGTCCTTCCGCAGGCGCACGGACAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000330883.9
ENST00000684241.1
CDS CAA 72 bp GCCCCAGTGACTGCATATTCAGAAGGCTCGCACCTCTaGAGGCTGCAGAGGGCATTTCCAGTCCAGTGCCCG +
Preference number: 6 (lower is better)
Translates to: APVTAYSEGSHL*RLQRAFPVQCP
Trigger: CGGGCACTGGACTGGAAATGCCCTCTGCAGCCTCAAGAGGTGCGAGCCTTCTGAATATGCAGTCACTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461280.2
ENST00000473610.5
ENST00000532957.5
CDS CAA 72 bp CGGTCACTGGTGGGCGAAGCCAAGAAGGGGTCGCCCTaGAGGTCCACAAAGTTGAGGGTGATTTGGGGAATC +
Preference number: 6 (lower is better)
Translates to: RSLVGEAKKGSP*RSTKLRVIWGI
Trigger: GATTCCCCAAATCACCCTCAACTTTGTGGACCTCAAGGGCGACCCCTTCTTGGCTTCGCCCACCAGTGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000532957.5
ENST00000684241.1
CDS CAA 90 bp AGCCAAGAAGGGGTCGCCCTTGAGGTCCACAAAGTTGAGGGTGATTaGGGGAATCTTGCTAATGGTGCGGTAGCGCACGAGGTCGGAGTC +
Preference number: 6 (lower is better)
Translates to: SQEGVALEVHKVEGD*GNLANGAVAHEVGV
Trigger: GACTCCGACCTCGTGCGCTACCGCACCATTAGCAAGATTCCCCAAATCACCCTCAACTTTGTGGACCTCAAGGGCGACCCCTTCTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000532957.5
ENST00000684241.1
CDS TCA 72 bp GTGCCTCCAGGGTCCTTACTACTGACTGTGACCGCCTaGGACTTGTTTGCTGTGCCAAGAGGTTCCCCTCTG +
Preference number: 6 (lower is better)
Translates to: VPPGSLLLTVTA*DLFAVPRGSPL
Trigger: CAGAGGGGAACCTCTTGGCACAGCAAACAAGTCTCAGGCGGTCACAGTCAGTAGTAAGGACCCTGGAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683359.1
CDS CAA 72 bp GGGGTCGCCCTTGAGGTCCACAAAGTTGAGGGTGATTaGGGGAATCTTGCTAATGGTGCGGTAGCGCACGAG +
Preference number: 6 (lower is better)
Translates to: GVALEVHKVEGD*GNLANGAVAHE
Trigger: CTCGTGCGCTACCGCACCATTAGCAAGATTCCCCAAATCACCCTCAACTTTGTGGACCTCAAGGGCGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000532957.5
ENST00000684241.1
CDS GCA 72 bp CTCTGCCTTTCCCTCAAGCGAGGCGCTGTAGCACAGTaGTTAAGCCCACAGACTTTAGGCCTACGATCTCTG +
Preference number: 6 (lower is better)
Translates to: LCLSLKRGAVAQ*LSPQTLGLRSL
Trigger: CAGAGATCGTAGGCCTAAAGTCTGTGGGCTTAAGCACTGTGCTACAGCGCCTCGCTTGAGGGAAAGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684241.1
CDS CAA 72 bp GAAGCCAAGAAGGGGTCGCCCTTGAGGTCCACAAAGTaGAGGGTGATTTGGGGAATCTTGCTAATGGTGCGG +
Preference number: 6 (lower is better)
Translates to: EAKKGSPLRSTK*RVIWGILLMVR
Trigger: CCGCACCATTAGCAAGATTCCCCAAATCACCCTCAACTTTGTGGACCTCAAGGGCGACCCCTTCTTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000532957.5
ENST00000684241.1
CDS CAA 72 bp CCCAGGGACAGGACCTGGGTGACCTTCTCAGTGACATaGTGGGTTCGCTCCTTTATCTTAGGTGCTATGATC +
Preference number: 6 (lower is better)
Translates to: PRDRTWVTFSVT*WVRSFILGAMI
Trigger: GATCATAGCACCTAAGATAAAGGAGCGAACCCACAATGTCACTGAGAAGGTCACCCAGGTCCTGTCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000532957.5
ENST00000684241.1
CDS GCA 72 bp CTCAGTGACATTGTGGGTTCGCTCCTTTATCTTAGGTaGTATGATCTCACGGTCACTGGTGGGCGAAGCCAA +
Preference number: 6 (lower is better)
Translates to: LSDIVGSLLYLR*YDLTVTGGRSQ
Trigger: TTGGCTTCGCCCACCAGTGACCGTGAGATCATAGCACCTAAGATAAAGGAGCGAACCCACAATGTCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262186.10
ENST00000532957.5
ENST00000684241.1
CDS TCA 72 bp GCTCTTTCCCGGCTGCACTTTTTCTCACGCTGGCTATaGTCCTTTCTTCTGCCATCTTTGATCTCATTTCCT +
Preference number: 6 (lower is better)
Translates to: ALSRLHFFSRWL*SFLLPSLISFP
Trigger: AGGAAATGAGATCAAAGATGGCAGAAGAAAGGATCATAGCCAGCGTGAGAAAAAGTGCAGCCGGGAAAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684241.1
CDS TCA 72 bp TATAGCTTAGCACAGCACAGAACAGAAATGCTAGAATaGACCACATGCAGTAAGGCCCAGTGTTATGTAGTG +
Preference number: 6 (lower is better)
Translates to: YSLAQHRTEMLE*TTCSKAQCYVV
Trigger: CACTACATAACACTGGGCCTTACTGCATGTGGTTCATTCTAGCATTTCTGTTCTGTGCTGTGCTAAGCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461280.2
ENST00000473610.5
ENST00000532957.5
CDS GCA 72 bp TACAGCAATTTGGCATCACCACAAAATCCACGCATGTaGTCTTGTATTTCACAGATGTACCAGCCTATAACA +
Preference number: 6 (lower is better)
Translates to: YSNLASPQNPRM*SCISQMYQPIT
Trigger: TGTTATAGGCTGGTACATCTGTGAAATACAAGAGCACATGCGTGGATTTTGTGGTGATGCCAAATTGCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684241.1