Pregenerated sensors for KCNA7 (Homo sapiens)
Ensembl gene IDs: ENSG00000104848Ensembl transcript IDs: ENST00000221444.1, ENST00000221444.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAATCCCATGGATACAGAATCCAGTCCCGCCCCCTACAGCGAGCTaGGGAGCCAGCTCGGCACACCTCCCAGAGCCCTCGCCACTGCAT | + |
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Preference number: 1 (lower is better) Translates to: PIPWIQNPVPPPTAS*GASSAHLPEPSPLH Trigger: ATGCAGTGGCGAGGGCTCTGGGAGGTGTGCCGAGCTGGCTCCCCAGCTCGCTGTAGGGGGCGGGACTGGATTCTGTATCCATGGGATTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR TCA 90 bp | CGGCACACCTCCCAGAGCCCTCGCCACTGCATGCTCCCAGATACATaGTGCTTCCCCACTGCTATTTCCTTTGGGTCCTGGTGCTACCAC | + |
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Preference number: 1 (lower is better) Translates to: RHTSQSPRHCMLPDT*CFPTAISFGSWCYH Trigger: GTGGTAGCACCAGGACCCAAAGGAAATAGCAGTGGGGAAGCATCATGTATCTGGGAGCATGCAGTGGCGAGGGCTCTGGGAGGTGTGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR TCA 90 bp | CGTCTCTGCCATACCCCACCCTCCAGGTCATTGTCTCCCTCTCCCTaGGTCTCTGTTTCTCTCCCTTTGGGTCTCTGTCTCTCTGGGTTT | + |
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Preference number: 1 (lower is better) Translates to: RLCHTPPSRSLSPSP*VSVSLPLGLCLSGF Trigger: AAACCCAGAGAGACAGAGACCCAAAGGGAGAGAAACAGAGACTCAGGGAGAGGGAGACAATGACCTGGAGGGTGGGGTATGGCAGAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR TCA 90 bp | AGGAGGAGCATCCACCTCTTCCTAATTTACCCAGTCGCCTCTGGATaGACACCCAATCCCATGGATACAGAATCCAGTCCCGCCCCCTAC | + |
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Preference number: 1 (lower is better) Translates to: RRSIHLFLIYPVASG*TPNPMDTESSPAPY Trigger: GTAGGGGGCGGGACTGGATTCTGTATCCATGGGATTGGGTGTTCATCCAGAGGCGACTGGGTAAATTAGGAAGAGGTGGATGCTCCTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR GCA 90 bp | CAACATGGCCCTAGGGGACCCACCAAACCACAGAATCCTACACAATaGAGCTGGACCACACTATCCCAGACTCACAACCCAACCAAACCC | + |
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Preference number: 1 (lower is better) Translates to: QHGPRGPTKPQNPTQ*SWTTLSQTHNPTKP Trigger: GGGTTTGGTTGGGTTGTGAGTCTGGGATAGTGTGGTCCAGCTGCATTGTGTAGGATTCTGTGGTTTGGTGGGTCCCCTAGGGCCATGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR CCA 90 bp | GGCCCTAGGGGACCCACCAAACCACAGAATCCTACACAATGCAGCTaGACCACACTATCCCAGACTCACAACCCAACCAAACCCAACACT | + |
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Preference number: 1 (lower is better) Translates to: GPRGPTKPQNPTQCS*TTLSQTHNPTKPNT Trigger: AGTGTTGGGTTTGGTTGGGTTGTGAGTCTGGGATAGTGTGGTCCAGCTGCATTGTGTAGGATTCTGTGGTTTGGTGGGTCCCCTAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR GCA 90 bp | GCTTCCCCACTGCTATTTCCTTTGGGTCCTGGTGCTACCACTAAATaGAAAACAGCCCGATGTGGCCCTATGGAACTCGTTCGCACAGTC | + |
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Preference number: 1 (lower is better) Translates to: ASPLLFPLGPGATTK*KTARCGPMELVRTV Trigger: GACTGTGCGAACGAGTTCCATAGGGCCACATCGGGCTGTTTTGCATTTAGTGGTAGCACCAGGACCCAAAGGAAATAGCAGTGGGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR TCA 90 bp | CCACACACATTCGATCTCAACAATGCCATGGGGGACCATCTAACTTaGCCCAACATGGCCCTAGGGGACCCACCAAACCACAGAATCCTA | + |
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Preference number: 1 (lower is better) Translates to: PHTFDLNNAMGDHLT*PNMALGDPPNHRIL Trigger: TAGGATTCTGTGGTTTGGTGGGTCCCCTAGGGCCATGTTGGGTCAAGTTAGATGGTCCCCCATGGCATTGTTGAGATCGAATGTGTGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR GCA 90 bp | GAGCCCTCGCCACTGCATGCTCCCAGATACATGATGCTTCCCCACTaGTATTTCCTTTGGGTCCTGGTGCTACCACTAAATGCAAAACAG | + |
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Preference number: 1 (lower is better) Translates to: EPSPLHAPRYMMLPH*YFLWVLVLPLNAKQ Trigger: CTGTTTTGCATTTAGTGGTAGCACCAGGACCCAAAGGAAATAGCAGTGGGGAAGCATCATGTATCTGGGAGCATGCAGTGGCGAGGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR CCA 90 bp | GTCCTGGTGCTACCACTAAATGCAAAACAGCCCGATGTGGCCCTATaGAACTCGTTCGCACAGTCCAACTCAACCCAACTTCCTGTAGGA | + |
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Preference number: 1 (lower is better) Translates to: VLVLPLNAKQPDVAL*NSFAQSNSTQLPVG Trigger: TCCTACAGGAAGTTGGGTTGAGTTGGACTGTGCGAACGAGTTCCATAGGGCCACATCGGGCTGTTTTGCATTTAGTGGTAGCACCAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR CCA 90 bp | CTGCATGCTCCCAGATACATGATGCTTCCCCACTGCTATTTCCTTTaGGTCCTGGTGCTACCACTAAATGCAAAACAGCCCGATGTGGCC | + |
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Preference number: 1 (lower is better) Translates to: LHAPRYMMLPHCYFL*VLVLPLNAKQPDVA Trigger: GGCCACATCGGGCTGTTTTGCATTTAGTGGTAGCACCAGGACCCAAAGGAAATAGCAGTGGGGAAGCATCATGTATCTGGGAGCATGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR TCA 90 bp | CACATAGTGACACAACTCAATGGAACTCAATTCAGCATGGCCCTATaGGACTCAAACAGTGGCATGACCCAACTGAACTGGCCTTACAAG | + |
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Preference number: 1 (lower is better) Translates to: HIVTQLNGTQFSMAL*DSNSGMTQLNWPYK Trigger: CTTGTAAGGCCAGTTCAGTTGGGTCATGCCACTGTTTGAGTCTCATAGGGCCATGCTGAATTGAGTTCCATTGAGTTGTGTCACTATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR CCA 90 bp | ACTCAATGGAACTCAATTCAGCATGGCCCTATGAGACTCAAACAGTaGCATGACCCAACTGAACTGGCCTTACAAGGCTCATATGGTTGT | + |
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Preference number: 1 (lower is better) Translates to: TQWNSIQHGPMRLKQ*HDPTELALQGSYGC Trigger: ACAACCATATGAGCCTTGTAAGGCCAGTTCAGTTGGGTCATGCCACTGTTTGAGTCTCATAGGGCCATGCTGAATTGAGTTCCATTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR GCA 90 bp | TCACATTTCTACATGACTCGCAAGTTCACAGAACCTAAAATAACATaGCCCTGGAAGAATCACAGAGCTACACAATTTCCACCATGTCTC | + |
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Preference number: 1 (lower is better) Translates to: SHFYMTRKFTEPKIT*PWKNHRATQFPPCL Trigger: GAGACATGGTGGAAATTGTGTAGCTCTGTGATTCTTCCAGGGGCATGTTATTTTAGGTTCTGTGAACTTGCGAGTCATGTAGAAATGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR TCA 90 bp | CAGAACCCTACAAGATTCATTTGGTCATACAAACTTAACCCAATGTaGCCTAGAAAGCTCAAATTCTACCACTGGACTCTTCACATTTCT | + |
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Preference number: 1 (lower is better) Translates to: QNPTRFIWSYKLNPM*PRKLKFYHWTLHIS Trigger: AGAAATGTGAAGAGTCCAGTGGTAGAATTTGAGCTTTCTAGGTCACATTGGGTTAAGTTTGTATGACCAAATGAATCTTGTAGGGTTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR GCA 90 bp | CTCGGCACACCTCCCAGAGCCCTCGCCACTGCATGCTCCCAGATACATGATGCTCCCATTGCCATTCGCTaGTGCTTCAGGAGGTACCCA | + |
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Preference number: 2 (lower is better) Translates to: LGTPPRALATACSQIHDAPIAIR*CFRRYP Trigger: TGGGTACCTCCTGAAGCAGCAGCGAATGGCAATGGG...AGCATCATGTATCTGGGAGCATGCAGTGGCGAGGGCTCTGGGAGGTGTGCCGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR GCA 90 bp | CTCGGCACACCTCCCAGAGCCCTCGCCACTGCATGCTCCCAGATACATGATGCTATTGCCATTCGCTGCTaGTTCAGGAGGTACCCACAG | + |
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Preference number: 2 (lower is better) Translates to: LGTPPRALATACSQIHDAIAIRC*FRRYPQ Trigger: CTGTGGGTACCTCCTGAAGCAGCAGCGAATGGCAAT...AGCATCATGTATCTGGGAGCATGCAGTGGCGAGGGCTCTGGGAGGTGTGCCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR CCA 90 bp | AACACCCAATCCCATGGATACAGAATCCAGTCCCGCCCCCTACAGCGAGCTGGGCCTACACAATGCAGCTaGACCACACTATCCCAGACT | + |
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Preference number: 2 (lower is better) Translates to: NTQSHGYRIQSRPLQRAGPTQCS*TTLSQT Trigger: AGTCTGGGATAGTGTGGTCCAGCTGCATTGTGTAGG...CCCAGCTCGCTGTAGGGGGCGGGACTGGATTCTGTATCCATGGGATTGGGTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR TCA 90 bp | ATGCAAAACAGCCCGATGTGGCCCTATGGAACTCGTTCGCACAGTCCAACTCAAGGGGACCATCTAACTTaGCCCAACATGGCCCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: MQNSPMWPYGTRSHSPTQGDHLT*PNMALG Trigger: CCCTAGGGCCATGTTGGGTCAAGTTAGATGGTCCCC...TTGAGTTGGACTGTGCGAACGAGTTCCATAGGGCCACATCGGGCTGTTTTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR GCA 90 bp | AACACCCAATCCCATGGATACAGAATCCAGTCCCGCCCCCTACAGCGAGCTGGGCAGAATCCTACACAATaGAGCTGGACCACACTATCC | + |
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Preference number: 2 (lower is better) Translates to: NTQSHGYRIQSRPLQRAGQNPTQ*SWTTLS Trigger: GGATAGTGTGGTCCAGCTGCATTGTGTAGGATTCTG...CCCAGCTCGCTGTAGGGGGCGGGACTGGATTCTGTATCCATGGGATTGGGTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR CCA 90 bp | CTCGGCACACCTCCCAGAGCCCTCGCCACTGCATGCTCCCAGATACATGATGCTATGAGACTCAAACAGTaGCATGACCCAACTGAACTG | + |
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Preference number: 2 (lower is better) Translates to: LGTPPRALATACSQIHDAMRLKQ*HDPTEL Trigger: CAGTTCAGTTGGGTCATGCCACTGTTTGAGTCTCAT...AGCATCATGTATCTGGGAGCATGCAGTGGCGAGGGCTCTGGGAGGTGTGCCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR CCA 90 bp | GTTTCCCCGTCTGTAAGAAATGAGGCTACGGGACTCAGGAGGACCCGTGTGTCCTTACCCAGTCGCCTCTaGATGAACACCCAATCCCAT | + |
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Preference number: 2 (lower is better) Translates to: VSPSVRNEATGLRRTRVSLPSRL*MNTQSH Trigger: ATGGGATTGGGTGTTCATCCAGAGGCGACTGGGTAA...GGACACACGGGTCCTCCTGAGTCCCGTAGCCTCATTTCTTACAGACGGGGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR TCA 90 bp | CTCGGCACACCTCCCAGAGCCCTCGCCACTGCATGCTCCCAGATACATGATGCTAACCAAACCCAACACTaGCCTAGGAAACTCACAAAA | + |
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Preference number: 2 (lower is better) Translates to: LGTPPRALATACSQIHDANQTQH*PRKLTK Trigger: TTTTGTGAGTTTCCTAGGTCAGTGTTGGGTTTGGTT...AGCATCATGTATCTGGGAGCATGCAGTGGCGAGGGCTCTGGGAGGTGTGCCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR CCA 90 bp | CTCGGCACACCTCCCAGAGCCCTCGCCACTGCATGCTCCCAGATACATGATGCTAGTGACACAACTCAATaGAACTCAATTCAGCATGGC | + |
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Preference number: 2 (lower is better) Translates to: LGTPPRALATACSQIHDASDTTQ*NSIQHG Trigger: GCCATGCTGAATTGAGTTCCATTGAGTTGTGTCACT...AGCATCATGTATCTGGGAGCATGCAGTGGCGAGGGCTCTGGGAGGTGTGCCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR CAA 90 bp | ACCACACACATTCGATCTCAACAATGCCATGGGGGACCATCTAACTaGACCCAACATGGCCCTAGGGGACCCACCAAACCACAGAATCCT | + |
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Preference number: 2 (lower is better) Translates to: TTHIRSQQCHGGPSN*TQHGPRGPTKPQNP Trigger: AGGATTCTGTGGTTTGGTGGGTCCCCTAGGGCCATGTTGGGTCAAGTTAGATGGTCCCCCATGGCATTGTTGAGATCGAATGTGTGTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR TCA 90 bp | ACAAGGCTCATATGGTTGTACAATTCAACACAACTCAACTCGCTGTGGCCACGACCCTCTAGGGAGGTGTaGGGTCCTGCAGACCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: TRLIWLYNSTQLNSLWPRPSREV*GPADLN Trigger: GTTGAGGTCTGCAGGACCTCACACCTCCCTAGAGGG...TCGTGGCCACAGCGAGTTGAGTTGTGTTGAATTGTACAACCATATGAGCCTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR GCA 90 bp | ACAAGCTGTGAGACCTTGGGAAGCCACTCCCCTGCTCTGAGACTCAGGTTTCTCATGATGCTTCCCCACTaGTATTTCCTTTGGGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: TSCETLGSHSPALRLRFLMMLPH*YFLWVL Trigger: CAGGACCCAAAGGAAATAGCAGTGGGGAAGCATCAT...GAGAAACCTGAGTCTCAGAGCAGGGGAGTGGCTTCCCAAGGTCTCACAGCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTTGGCTCTGTCCCTCTATCATGTCTGGACAGAGTACAGTTTTCTCCCCCGCCCTCGCCACTGCATaGTCCCAGATACATGATGCT | + |
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Preference number: 2 (lower is better) Translates to: SFWLCPSIMSGQSTVFSPALATA*SQIHDA Trigger: AGCATCATGTATCTGGGAGCATGCAGTGGCGAGGGC...GGGGGAGAAAACTGTACTCTGTCCAGACATGATAGAGGGACAGAGCCAAAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR CAA 90 bp | CTTTTCTGCCTTTTTCTATTGTGGTTCTCTTTCCCTGAGACTCTGTaGTTCTGTCTCCAACTCTGGGTGTCTGACGCTGCCCTCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: LFCLFLLWFSFPETL*FCLQLWVSDAALWV Trigger: GACCCAGAGGGCAGCGTCAGACACCCAGAGTTGGAGACAGAACAACAGAGTCTCAGGGAAAGAGAACCACAATAGAAAAAGGCAGAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR TCA 90 bp | GGAATAGACTGTACATCACTCTTGGGTTCAGGGGCACCAACTTTTTCTGGCTTTCCAGTCGCCTCTGGATaGACACCCAATCCCATGGAT | + |
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Preference number: 2 (lower is better) Translates to: GIDCTSLLGSGAPTFSGFPVASG*TPNPMD Trigger: ATCCATGGGATTGGGTGTTCATCCAGAGGCGACTGG...AAAGCCAGAAAAAGTTGGTGCCCCTGAACCCAAGAGTGATGTACAGTCTATTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR CCA 90 bp | ATGCAAAACAGCCCGATGTGGCCCTATGGAACTCGTTCGCACAGTCCAACTCAAATGACCCAACTGAACTaGCCTTACAAGGCTCATATG | + |
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Preference number: 2 (lower is better) Translates to: MQNSPMWPYGTRSHSPTQMTQLN*PYKAHM Trigger: CATATGAGCCTTGTAAGGCCAGTTCAGTTGGGTCAT...TTGAGTTGGACTGTGCGAACGAGTTCCATAGGGCCACATCGGGCTGTTTTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR TCA 90 bp | GGAATAGACTGTACATCACTCTTGGGTTCAGGGGCACCAACTTTTTCTGGCTTTTTCAGCATGGCCCTATaGGACTCAAACAGTGGCATG | + |
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Preference number: 2 (lower is better) Translates to: GIDCTSLLGSGAPTFSGFFSMAL*DSNSGM Trigger: CATGCCACTGTTTGAGTCTCATAGGGCCATGCTGAA...AAAGCCAGAAAAAGTTGGTGCCCCTGAACCCAAGAGTGATGTACAGTCTATTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTTGGCTCTGTCCCTCTATCATGTCTGGACAGAGTACAGTTTTCTCCCCCAACAGCACAATGAAGTaGATGTGGGGTAAACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: SFWLCPSIMSGQSTVFSPNSTMK*MWGKQE Trigger: CTCCTGTTTACCCCACATCCACTTCATTGTGCTGTT...GGGGGAGAAAACTGTACTCTGTCCAGACATGATAGAGGGACAGAGCCAAAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR TCA 90 bp | ACTTTGATACCAAAGGAAGCCCTATATGTGTTAGTGATTTCAGCCTTCTTCCTCCCCGTCTGTAAGAAATaGGGCTACGGGACTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: TLIPKEALYVLVISAFFLPVCKK*GYGTQE Trigger: CTCCTGAGTCCCGTAGCCTCATTTCTTACAGACGGG...GAGGAAGAAGGCTGAAATCACTAACACATATAGGGCTTCCTTTGGTATCAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR GCA 90 bp | GACTCACATAGTGACACAACTCAATGGAACTCAATTCAGCATGGCCCTATGAGACACAACACAACCCATTaGCATTCGCTGCTGCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: DSHSDTTQWNSIQHGPMRHNTTH*HSLLLQ Trigger: CTGAAGCAGCAGCGAATGGCAATGGGTTGTGTTGTG...TCTCATAGGGCCATGCTGAATTGAGTTCCATTGAGTTGTGTCACTATGTGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR TCA 90 bp | CACAATTTCCACCATGTCTCAACGAAACTTAACACCACACACATTCGATCTCAACCCCAAAAGGCTCCATaGGCTTTGCACAACTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: HNFHHVSTKLNTTHIRSQPQKAP*ALHNSE Trigger: CTCTGAGTTGTGCAAAGCTCATGGAGCCTTTTGGGG...TTGAGATCGAATGTGTGTGGTGTTAAGTTTCGTTGAGACATGGTGGAAATTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGATACCAAAGGAAGCCCTATATGTGTTAGTGATTTCAGCCTTCTTCCTCCAAAACAGCCCGATGTaGCCCTATGGAACTCGTTCG | + |
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Preference number: 2 (lower is better) Translates to: TLIPKEALYVLVISAFFLQNSPM*PYGTRS Trigger: CGAACGAGTTCCATAGGGCCACATCGGGCTGTTTTG...GAGGAAGAAGGCTGAAATCACTAACACATATAGGGCTTCCTTTGGTATCAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR CCA 90 bp | GGAATAGACTGTACATCACTCTTGGGTTCAGGGGCACCAACTTTTTCTGGCTTTAAAATAACATGCCCCTaGAAGAATCACAGAGCTACA | + |
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Preference number: 2 (lower is better) Translates to: GIDCTSLLGSGAPTFSGFKITCP*KNHRAT Trigger: TGTAGCTCTGTGATTCTTCCAGGGGCATGTTATTTT...AAAGCCAGAAAAAGTTGGTGCCCCTGAACCCAAGAGTGATGTACAGTCTATTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR TCA 90 bp | ACTTTGATACCAAAGGAAGCCCTATATGTGTTAGTGATTTCAGCCTTCTTCCTCAGGAAACTCACAAAATaGTACGACCAAACCTATCTC | + |
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Preference number: 2 (lower is better) Translates to: TLIPKEALYVLVISAFFLRKLTK*YDQTYL Trigger: GAGATAGGTTTGGTCGTATCATTTTGTGAGTTTCCT...GAGGAAGAAGGCTGAAATCACTAACACATATAGGGCTTCCTTTGGTATCAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR CCA 72 bp | TGGATACAGAATCCAGTCCCGCCCCCTACAGCGAGCTaGGGAGCCAGCTCGGCACACCTCCCAGAGCCCTCG | + |
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Preference number: 3 (lower is better) Translates to: WIQNPVPPPTAS*GASSAHLPEPS Trigger: CGAGGGCTCTGGGAGGTGTGCCGAGCTGGCTCCCCAGCTCGCTGTAGGGGGCGGGACTGGATTCTGTATCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR CCA 72 bp | GGACATGTGAAGCAGACAGACAGCCTGCCTGGCCCCTaGGGACAAGCTGTGAGACCTTGGGAAGCCACTCCC | + |
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Preference number: 3 (lower is better) Translates to: GHVKQTDSLPGP*GQAVRPWEATP Trigger: GGGAGTGGCTTCCCAAGGTCTCACAGCTTGTCCCCAGGGGCCAGGCAGGCTGTCTGTCTGCTTCACATGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR TCA 72 bp | TACGGGACTCAGGAGGACCCGTGTGTCCCAGCAGGCTaGTGGGGACATGTGAAGCAGACAGACAGCCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: YGTQEDPCVPAG*WGHVKQTDSLP Trigger: AGGCAGGCTGTCTGTCTGCTTCACATGTCCCCATCAGCCTGCTGGGACACACGGGTCCTCCTGAGTCCCGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR CCA 72 bp | TTTACCCAGTCGCCTCTGGATGAACACCCAATCCCATaGATACAGAATCCAGTCCCGCCCCCTACAGCGAGC | + |
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Preference number: 3 (lower is better) Translates to: FTQSPLDEHPIP*IQNPVPPPTAS Trigger: GCTCGCTGTAGGGGGCGGGACTGGATTCTGTATCCATGGGATTGGGTGTTCATCCAGAGGCGACTGGGTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR TCA 72 bp | TTCGATCTCAACAATGCCATGGGGGACCATCTAACTTaGCCCAACATGGCCCTAGGGGACCCACCAAACCAC | + |
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Preference number: 3 (lower is better) Translates to: FDLNNAMGDHLT*PNMALGDPPNH Trigger: GTGGTTTGGTGGGTCCCCTAGGGCCATGTTGGGTCAAGTTAGATGGTCCCCCATGGCATTGTTGAGATCGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR GCA 72 bp | CCTAGGGGACCCACCAAACCACAGAATCCTACACAATaGAGCTGGACCACACTATCCCAGACTCACAACCCA | + |
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Preference number: 3 (lower is better) Translates to: PRGPTKPQNPTQ*SWTTLSQTHNP Trigger: TGGGTTGTGAGTCTGGGATAGTGTGGTCCAGCTGCATTGTGTAGGATTCTGTGGTTTGGTGGGTCCCCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR CCA 72 bp | GGACCCACCAAACCACAGAATCCTACACAATGCAGCTaGACCACACTATCCCAGACTCACAACCCAACCAAA | + |
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Preference number: 3 (lower is better) Translates to: GPTKPQNPTQCS*TTLSQTHNPTK Trigger: TTTGGTTGGGTTGTGAGTCTGGGATAGTGTGGTCCAGCTGCATTGTGTAGGATTCTGTGGTTTGGTGGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR TCA 72 bp | ATCCACCTCTTCCTAATTTACCCAGTCGCCTCTGGATaGACACCCAATCCCATGGATACAGAATCCAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: IHLFLIYPVASG*TPNPMDTESSP Trigger: GGGACTGGATTCTGTATCCATGGGATTGGGTGTTCATCCAGAGGCGACTGGGTAAATTAGGAAGAGGTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR GCA 72 bp | TTCATTAACACAACACAACCCATTGCCATTCGCTGCTaGTTCAGGAGGTACCCACAGGAGCTACCAAACCAC | + |
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Preference number: 3 (lower is better) Translates to: FINTTQPIAIRC*FRRYPQELPNH Trigger: GTGGTTTGGTAGCTCCTGTGGGTACCTCCTGAAGCAGCAGCGAATGGCAATGGGTTGTGTTGTGTTAATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR GCA 72 bp | GTCTTCATTAACACAACACAACCCATTGCCATTCGCTaGTGCTTCAGGAGGTACCCACAGGAGCTACCAAAC | + |
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Preference number: 3 (lower is better) Translates to: VFINTTQPIAIR*CFRRYPQELPN Trigger: GTTTGGTAGCTCCTGTGGGTACCTCCTGAAGCAGCAGCGAATGGCAATGGGTTGTGTTGTGTTAATGAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR GCA 72 bp | CCACTGCATGCTCCCAGATACATGATGCTTCCCCACTaGTATTTCCTTTGGGTCCTGGTGCTACCACTAAAT | + |
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Preference number: 3 (lower is better) Translates to: PLHAPRYMMLPH*YFLWVLVLPLN Trigger: ATTTAGTGGTAGCACCAGGACCCAAAGGAAATAGCAGTGGGGAAGCATCATGTATCTGGGAGCATGCAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR CCA 72 bp | CTACCACTAAATGCAAAACAGCCCGATGTGGCCCTATaGAACTCGTTCGCACAGTCCAACTCAACCCAACTT | + |
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Preference number: 3 (lower is better) Translates to: LPLNAKQPDVAL*NSFAQSNSTQL Trigger: AAGTTGGGTTGAGTTGGACTGTGCGAACGAGTTCCATAGGGCCACATCGGGCTGTTTTGCATTTAGTGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR CCA 72 bp | GAGCATCCACCTCTTCCTAATTTACCCAGTCGCCTCTaGATGAACACCCAATCCCATGGATACAGAATCCAG | + |
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Preference number: 3 (lower is better) Translates to: EHPPLPNLPSRL*MNTQSHGYRIQ Trigger: CTGGATTCTGTATCCATGGGATTGGGTGTTCATCCAGAGGCGACTGGGTAAATTAGGAAGAGGTGGATGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR CCA 72 bp | AACTCAATTCAGCATGGCCCTATGAGACTCAAACAGTaGCATGACCCAACTGAACTGGCCTTACAAGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: NSIQHGPMRLKQ*HDPTELALQGS Trigger: TGAGCCTTGTAAGGCCAGTTCAGTTGGGTCATGCCACTGTTTGAGTCTCATAGGGCCATGCTGAATTGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR CCA 72 bp | GTGACAGGCCTGGTTCAGGATTGTTCTGTGATTCTATaGAATAGACTGTACATCACTCTTGGGTTCAGGGGC | + |
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Preference number: 3 (lower is better) Translates to: VTGLVQDCSVIL*NRLYITLGFRG Trigger: GCCCCTGAACCCAAGAGTGATGTACAGTCTATTCCATAGAATCACAGAACAATCCTGAACCAGGCCTGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR CAA 90 bp | GACTCACATAGTGACACAACTCAATGGAACTCAATTCAGCATGGCCCTATGAGAACACAACACAACCCATaGCCATTCGCTGCTGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: DSHSDTTQWNSIQHGPMRTQHNP*PFAAAS Trigger: TGAAGCAGCAGCGAATGGCAATGGGTTGTGTTGTGT...TCTCATAGGGCCATGCTGAATTGAGTTCCATTGAGTTGTGTCACTATGTGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR TCA 72 bp | ACACAACTCAATGGAACTCAATTCAGCATGGCCCTATaGGACTCAAACAGTGGCATGACCCAACTGAACTGG | + |
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Preference number: 3 (lower is better) Translates to: TQLNGTQFSMAL*DSNSGMTQLNW Trigger: CCAGTTCAGTTGGGTCATGCCACTGTTTGAGTCTCATAGGGCCATGCTGAATTGAGTTCCATTGAGTTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR-3UTR CAA 90 bp | TCCTTTTGGCTCTGTCCCTCTATCATGTCTGGACAGAGTACAGTTTTCTCCCCCACAAGGCTCATATGGTaGTACAATTCAACACAACTC | + |
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Preference number: 3 (lower is better) Translates to: SFWLCPSIMSGQSTVFSPTRLIW*YNSTQL Trigger: GAGTTGTGTTGAATTGTACAACCATATGAGCCTTGT...GGGGGAGAAAACTGTACTCTGTCCAGACATGATAGAGGGACAGAGCCAAAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR CCA 72 bp | ATATGGTTGTACAATTCAACACAACTCAACTCGCTGTaGCCACGAAAAATGTCCAGCCACACACCTCTACAC | + |
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Preference number: 3 (lower is better) Translates to: IWLYNSTQLNSL*PRKMSSHTPLH Trigger: GTGTAGAGGTGTGTGGCTGGACATTTTTCGTGGCCACAGCGAGTTGAGTTGTGTTGAATTGTACAACCATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR GCA 72 bp | TACATGACTCGCAAGTTCACAGAACCTAAAATAACATaGCCCTGGAAGAATCACAGAGCTACACAATTTCCA | + |
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Preference number: 3 (lower is better) Translates to: YMTRKFTEPKIT*PWKNHRATQFP Trigger: TGGAAATTGTGTAGCTCTGTGATTCTTCCAGGGGCATGTTATTTTAGGTTCTGTGAACTTGCGAGTCATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR CAA 72 bp | ATTCGATCTCAACAATGCCATGGGGGACCATCTAACTaGACCCAACATGGCCCTAGGGGACCCACCAAACCA | + |
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Preference number: 4 (lower is better) Translates to: IRSQQCHGGPSN*TQHGPRGPTKP Trigger: TGGTTTGGTGGGTCCCCTAGGGCCATGTTGGGTCAAGTTAGATGGTCCCCCATGGCATTGTTGAGATCGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR CAA 72 bp | CTTTTTCTATTGTGGTTCTCTTTCCCTGAGACTCTGTaGTTCTGTCTCCAACTCTGGGTGTCTGACGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LFLLWFSFPETL*FCLQLWVSDAA Trigger: GGCAGCGTCAGACACCCAGAGTTGGAGACAGAACAACAGAGTCTCAGGGAAAGAGAACCACAATAGAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| 3UTR CAA 72 bp | TCTGAAAGATTTCTGAAAATGTTCGGCCTTGTGACCTaGGGTAACACCTGCTGCTCTGAGCCTCAGTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: SERFLKMFGLVT*GNTCCSEPQFP Trigger: GGGAAACTGAGGCTCAGAGCAGCAGGTGTTACCCAAGGTCACAAGGCCGAACATTTTCAGAAATCTTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.1 |
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| CDS CCA 90 bp | AAGAACGGGTCATTGAAGGGCAGGCGGGGTGGATTTCCAGGCATTTaGCTGGAGCCATTCAGCGGAGCGGGGAACGGGCCGGCTGCGGCT | + |
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Preference number: 5 (lower is better) Translates to: KNGSLKGRRGGFPGI*LEPFSGAGNGPAAA Trigger: AGCCGCAGCCGGCCCGTTCCCCGCTCCGCTGAATGGCTCCAGCCAAATGCCTGGAAATCCACCCCGCCTGCCCTTCAATGACCCGTTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221444.2 |
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| CDS TCA 90 bp | GGAGGTGTGAGGTCCTGCAGACCTCAACTGTTCCTCACACTTCGGTaGCCAGGTGTTTCCCTGGGGGTGCCCAGAGTGGAGGTGGTAGCT | + |
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Preference number: 5 (lower is better) Translates to: GGVRSCRPQLFLTLR*PGVSLGVPRVEVVA Trigger: AGCTACCACCTCCACTCTGGGCACCCCCAGGGAAACACCTGGTCACCGAAGTGTGAGGAACAGTTGAGGTCTGCAGGACCTCACACCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000221444.2 |
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| CDS GCA 72 bp | GGAACGGGCCGGCTGCGGCTGCAGCAGCAAGCCCCGTaGCGTCGCGGTCGTCGCGGAAGTCAGGCAGCGTCT | + |
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Preference number: 6 (lower is better) Translates to: GTGRLRLQQQAP*RRGRRGSQAAS Trigger: AGACGCTGCCTGACTTCCGCGACGACCGCGACGGCACGGGGCTTGCTGCTGCAGCCGCAGCCGGCCCGTTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221444.2 |
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| CDS CCA 72 bp | AGGAGGCCCAGCTCACGCATGGAGGCCCGAAGCGTCTaGCCCAAGATTTGCAGGCCCTTTGAGTGCCGGGAC | + |
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Preference number: 6 (lower is better) Translates to: RRPSSRMEARSV*PKICRPFECRD Trigger: GTCCCGGCACTCAAAGGGCCTGCAAATCTTGGGCCAGACGCTTCGGGCCTCCATGCGTGAGCTGGGCCTCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.2 |
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| CDS TCA 72 bp | AGGTCCTGCAGACCTCAACTGTTCCTCACACTTCGGTaGCCAGGTGTTTCCCTGGGGGTGCCCAGAGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: RSCRPQLFLTLR*PGVSLGVPRVE Trigger: CTCCACTCTGGGCACCCCCAGGGAAACACCTGGTCACCGAAGTGTGAGGAACAGTTGAGGTCTGCAGGACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000221444.2 |
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| CDS CCA 72 bp | GAGGTTCATCACGTTCTTGAAGAAGATAGCCTTGCTTaGACAGACCAGGAGGCGTACCAGCAGCTCAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: EVHHVLEEDSLA*TDQEAYQQLKG Trigger: TCCTTTGAGCTGCTGGTACGCCTCCTGGTCTGTCCAAGCAAGGCTATCTTCTTCAAGAACGTGATGAACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.2 |
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| CDS CAA 72 bp | TCGATGAGGTTCATCACGTTCTTGAAGAAGATAGCCTaGCTTGGACAGACCAGGAGGCGTACCAGCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SMRFITFLKKIA*LGQTRRRTSSS Trigger: TGAGCTGCTGGTACGCCTCCTGGTCTGTCCAAGCAAGGCTATCTTCTTCAAGAACGTGATGAACCTCATCGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221444.2 |
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