Pregenerated sensors for KCCAT198 (Homo sapiens)
Ensembl gene IDs: ENSG00000257642Ensembl transcript IDs: ENST00000549251.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCAATCCTTTGACTTGGATTCGAGCCCCCACGATGGACGCCACTTaGCGAGACCAGCTCGGTCGGGGAGACCCTAACCCAGTGGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: SNPLTWIRAPTMDAT*RDQLGRGDPNPVAL Trigger: GAGTGCCACTGGGTTAGGGTCTCCCCGACCGAGCTGGTCTCGGCAAGTGGCGTCCATCGTGGGGGCTCGAATCCAAGTCAAAGGATTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000549251.1 |
||
| CDS CCA 90 bp | CCTGTAAAAGATGAGGAATGTACCATTTGGCAAGTTGGGCATTGCTaGATAATAGCTTTAGCTTCTTTCCAGGTAATGCTGTATCACGGG | + |
|
Preference number: 5 (lower is better) Translates to: PVKDEECTIWQVGHC*IIALASFQVMLYHG Trigger: CCCGTGATACAGCATTACCTGGAAAGAAGCTAAAGCTATTATCCAGCAATGCCCAACTTGCCAAATGGTACATTCCTCATCTTTTACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549251.1 |
||
| CDS GCA 90 bp | CCTCCTGTAAAAGATGAGGAATGTACCATTTGGCAAGTTGGGCATTaGTGGATAATAGCTTTAGCTTCTTTCCAGGTAATGCTGTATCAC | + |
|
Preference number: 5 (lower is better) Translates to: PPVKDEECTIWQVGH*WIIALASFQVMLYH Trigger: GTGATACAGCATTACCTGGAAAGAAGCTAAAGCTATTATCCAGCAATGCCCAACTTGCCAAATGGTACATTCCTCATCTTTTACAGGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549251.1 |
||
| CDS CAA 72 bp | TTTCCATTCCAACCGTCGCTCCAGCAATCCTTTGACTaGGATTCGAGCCCCCACGATGGACGCCACTTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: FPFQPSLQQSFD*DSSPHDGRHLP Trigger: CGGCAAGTGGCGTCCATCGTGGGGGCTCGAATCCAAGTCAAAGGATTGCTGGAGCGACGGTTGGAATGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000549251.1 |
||
| CDS CAA 72 bp | CTAGTTTTCCATTCCAACCGTCGCTCCAGCAATCCTTaGACTTGGATTCGAGCCCCCACGATGGACGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: LVFHSNRRSSNP*TWIRAPTMDAT Trigger: AGTGGCGTCCATCGTGGGGGCTCGAATCCAAGTCAAAGGATTGCTGGAGCGACGGTTGGAATGGAAAACTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000549251.1 |
||
| CDS TCA 72 bp | TTCCAGTCCTCGAGGATTAACTCCTCCTGTAAAAGATaGGGAATGTACCATTTGGCAAGTTGGGCATTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FQSSRINSSCKR*GMYHLASWALL Trigger: CAGCAATGCCCAACTTGCCAAATGGTACATTCCTCATCTTTTACAGGAGGAGTTAATCCTCGAGGACTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549251.1 |
||
| CDS GCA 72 bp | AGTCTCCCAAATGAGGGAACATGTGTGACATCCATTTaGCAAAGAGAGTTAGGTTCCAGTCCTCGAGGATTA | + |
|
Preference number: 6 (lower is better) Translates to: SLPNEGTCVTSI*QRELGSSPRGL Trigger: TAATCCTCGAGGACTGGAACCTAACTCTCTTTGGCAAATGGATGTCACACATGTTCCCTCATTTGGGAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549251.1 |
||
| CDS CCA 72 bp | GATGAGGAATGTACCATTTGGCAAGTTGGGCATTGCTaGATAATAGCTTTAGCTTCTTTCCAGGTAATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DEECTIWQVGHC*IIALASFQVML Trigger: CAGCATTACCTGGAAAGAAGCTAAAGCTATTATCCAGCAATGCCCAACTTGCCAAATGGTACATTCCTCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549251.1 |
||
| CDS GCA 72 bp | AAAGATGAGGAATGTACCATTTGGCAAGTTGGGCATTaGTGGATAATAGCTTTAGCTTCTTTCCAGGTAATG | + |
|
Preference number: 6 (lower is better) Translates to: KDEECTIWQVGH*WIIALASFQVM Trigger: CATTACCTGGAAAGAAGCTAAAGCTATTATCCAGCAATGCCCAACTTGCCAAATGGTACATTCCTCATCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549251.1 |
||
| CDS CCA 72 bp | TTAACTCCTCCTGTAAAAGATGAGGAATGTACCATTTaGCAAGTTGGGCATTGCTGGATAATAGCTTTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LTPPVKDEECTI*QVGHCWIIALA Trigger: AGCTAAAGCTATTATCCAGCAATGCCCAACTTGCCAAATGGTACATTCCTCATCTTTTACAGGAGGAGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549251.1 |
||