RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KBTBD13 (Homo sapiens)

Ensembl gene IDs: ENSG00000234438

Ensembl transcript IDs: ENST00000432196.5

Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCAAGATTCCCCATGGGCCTCAGGTCCTGGGGGATGGAGACCAATaGGAACCACCCAGAGAAGTCTTCCCAAGGCCATGGAGAGGCTGG +
Preference number: 1 (lower is better)
Translates to: AKIPHGPQVLGDGDQ*EPPREVFPRPWRGW
Trigger: CCAGCCTCTCCATGGCCTTGGGAAGACTTCTCTGGGTGGTTCTCATTGGTCTCCATCCCCCAGGACCTGAGGCCCATGGGGAATCTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR GCA 90 bp CTTCCCAAGGCCATGGAGAGGCTGGAAAGGGCTGGGACAGGCATCTaGCCAGAAGCCAGAGCTGGGGATTTTGATGAAGGAACGAGAGTC +
Preference number: 1 (lower is better)
Translates to: LPKAMERLERAGTGI*PEARAGDFDEGTRV
Trigger: GACTCTCGTTCCTTCATCAAAATCCCCAGCTCTGGCTTCTGGGCAGATGCCTGTCCCAGCCCTTTCCAGCCTCTCCATGGCCTTGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR TCA 90 bp ACTTATCAGACTAGGCTACTCCAGGGCTGGAAGGTCCCAGGCTTCTaGGGGCAGCATTCTCCAGGGTTGGGACATAGGCCAGGAGAAGAG +
Preference number: 1 (lower is better)
Translates to: TYQTRLLQGWKVPGF*GQHSPGLGHRPGEE
Trigger: CTCTTCTCCTGGCCTATGTCCCAACCCTGGAGAATGCTGCCCTCAGAAGCCTGGGACCTTCCAGCCCTGGAGTAGCCTAGTCTGATAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR CCA 90 bp ACAGGTCTCACTCCAGGCTCAGCTCAGTCATTATCTGCTGCAAGCTaGCCCAGTCTCATCCCCTCTCTAGATGCCCCAACTACTGCTGCT +
Preference number: 1 (lower is better)
Translates to: TGLTPGSAQSLSAAS*PSLIPSLDAPTTAA
Trigger: AGCAGCAGTAGTTGGGGCATCTAGAGAGGGGATGAGACTGGGCCAGCTTGCAGCAGATAATGACTGAGCTGAGCCTGGAGTGAGACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR TCA 90 bp ACACGTGGTTGTGCACACACAATGATGTTACAGCCAGGGGTCCAATaGGCAATGCAGGCAGCCCAGGTCAGGAAAACGAAGAGCTGGGTG +
Preference number: 1 (lower is better)
Translates to: TRGCAHTMMLQPGVQ*AMQAAQVRKTKSWV
Trigger: CACCCAGCTCTTCGTTTTCCTGACCTGGGCTGCCTGCATTGCTCATTGGACCCCTGGCTGTAACATCATTGTGTGTGCACAACCACGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR GCA 90 bp GCTCATACCTCAACTGACCTGAAGTCATGTGGGTTAACAGTCCACTaGCCCGTGGTGATGGCAAAAACAGGGTGGGCAAGGGCTTACACC +
Preference number: 1 (lower is better)
Translates to: AHTSTDLKSCGLTVH*PVVMAKTGWARAYT
Trigger: GGTGTAAGCCCTTGCCCACCCTGTTTTTGCCATCACCACGGGGCAGTGGACTGTTAACCCACATGACTTCAGGTCAGTTGAGGTATGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR CCA 90 bp TCTCCACTTCTGACGAGGCCAAGATTCCCCATGGGCCTCAGGTCCTGGGGGATGAGGCCATGGAGAGGCTaGAAAGGGCTGGGACAGGCA +
Preference number: 2 (lower is better)
Translates to: SPLLTRPRFPMGLRSWGMRPWRG*KGLGQA
Trigger: TGCCTGTCCCAGCCCTTTCCAGCCTCTCCATGGCCT...CATCCCCCAGGACCTGAGGCCCATGGGGAATCTTGGCCTCGTCAGAAGTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR CCA 90 bp GGCCTCAGGTCCTGGGGGATGGAGACCAATGAGAACCACCCAGAGAAGTCTTCCGCTGCTCTGCTGGTATaGCTGGACTTGCAGAGACCC +
Preference number: 2 (lower is better)
Translates to: GLRSWGMETNENHPEKSSAALLV*LDLQRP
Trigger: GGGTCTCTGCAAGTCCAGCCATACCAGCAGAGCAGC...GGAAGACTTCTCTGGGTGGTTCTCATTGGTCTCCATCCCCCAGGACCTGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR CCA 90 bp GCTGACACTGCATTCTCCACTTCTGACGAGGCCAAGATTCCCCATGGGCCTCAGCTCTGCTGGTATGGCTaGACTTGCAGAGACCCTCCC +
Preference number: 2 (lower is better)
Translates to: ADTAFSTSDEAKIPHGPQLCWYG*TCRDPP
Trigger: GGGAGGGTCTCTGCAAGTCCAGCCATACCAGCAGAG...CTGAGGCCCATGGGGAATCTTGGCCTCGTCAGAAGTGGAGAATGCAGTGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR GCA 90 bp TCAGGTCCTGGGGGATGGAGACCAATGAGAACCACCCAGAGAAGTCTTCCCAAGGGGTCCAATGAGCAATaGAGGCAGCCCAGGTCAGGA +
Preference number: 2 (lower is better)
Translates to: SGPGGWRPMRTTQRSLPKGSNEQ*RQPRSG
Trigger: TCCTGACCTGGGCTGCCTGCATTGCTCATTGGACCC...CTTGGGAAGACTTCTCTGGGTGGTTCTCATTGGTCTCCATCCCCCAGGACCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR GCA 90 bp AAAAAGGAACGTGAAGAATCCTCTCGCCCCCACAGGTCTCACTCCAGGCTCAGCTGGTATGGCTGGACTTaGAGAGACCCTCCCCATCTG +
Preference number: 2 (lower is better)
Translates to: KKEREESSRPHRSHSRLSWYGWT*RDPPHL
Trigger: CAGATGGGGAGGGTCTCTGCAAGTCCAGCCATACCA...GCTGAGCCTGGAGTGAGACCTGTGGGGGCGAGAGGATTCTTCACGTTCCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR CAA 90 bp CACCAGAAGGCACCAAACCTGGGTGTCTCAGTAGAAAGAGGGAAGTaGCCAGCTACTTCTAAGGCCGGCCTCACACACTCAGCCATAGCT +
Preference number: 2 (lower is better)
Translates to: HQKAPNLGVSVERGK*PATSKAGLTHSAIA
Trigger: AGCTATGGCTGAGTGTGTGAGGCCGGCCTTAGAAGTAGCTGGCAACTTCCCTCTTTCTACTGAGACACCCAGGTTTGGTGCCTTCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR CAA 90 bp AAAGGGCTGGGACAGGCATCTGCCCAGAAGCCAGAGCTGGGGATTTaGATGAAGGAACGAGAGTCCTCATCCAACAACAGAGGTCAGCAC +
Preference number: 2 (lower is better)
Translates to: KGLGQASAQKPELGI*MKERESSSNNRGQH
Trigger: GTGCTGACCTCTGTTGTTGGATGAGGACTCTCGTTCCTTCATCAAAATCCCCAGCTCTGGCTTCTGGGCAGATGCCTGTCCCAGCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR TCA 90 bp GCTCTCAGCCTCCATGGTCTAAGCCTCCCCTTTCAGCAGCTAATGGTATCCTGCTGTTCACTGACATTGTaGCCCACCAGCTCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: ALSLHGLSLPFQQLMVSCCSLTL*PTSSQQ
Trigger: CTGCTGAGAGCTGGTGGGTCACAATGTCAGTGAACA...GCAGGATACCATTAGCTGCTGAAAGGGGAGGCTTAGACCATGGAGGCTGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR CCA 90 bp GCTGACACTGCATTCTCCACTTCTGACGAGGCCAAGATTCCCCATGGGCCTCAGAGGAAAACGAAGAGCTaGGTGAGCCAATGCTGCACA +
Preference number: 2 (lower is better)
Translates to: ADTAFSTSDEAKIPHGPQRKTKS*VSQCCT
Trigger: TGTGCAGCATTGGCTCACCCAGCTCTTCGTTTTCCT...CTGAGGCCCATGGGGAATCTTGGCCTCGTCAGAAGTGGAGAATGCAGTGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR TCA 90 bp TCAGGTCCTGGGGGATGGAGACCAATGAGAACCACCCAGAGAAGTCTTCCCAAGGGCTCATACCTCAACTaGCCTGAAGTCATGTGGGTT +
Preference number: 2 (lower is better)
Translates to: SGPGGWRPMRTTQRSLPKGSYLN*PEVMWV
Trigger: AACCCACATGACTTCAGGTCAGTTGAGGTATGAGCC...CTTGGGAAGACTTCTCTGGGTGGTTCTCATTGGTCTCCATCCCCCAGGACCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR GCA 90 bp ACAGAGGTCAGCACTAGGTTCCTAACTAGTGGCCTCTGTAGCCTGGGTTCTTTCAGCCTTCCCCAACCCTaGTTCTCTTCTGAGCTCTCA +
Preference number: 2 (lower is better)
Translates to: TEVSTRFLTSGLCSLGSFSLPQP*FSSELS
Trigger: TGAGAGCTCAGAAGAGAAGCAGGGTTGGGGAAGGCT...GAAAGAACCCAGGCTACAGAGGCCACTAGTTAGGAACCTAGTGCTGACCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR GCA 90 bp TTGGCTCATACCTCAACTGACCTGAAGTCATGTGGGTTAACAGTCCACTGCCCCCATCCCCTCTCTAGATaGCCCAACTACTGCTGCTCT +
Preference number: 2 (lower is better)
Translates to: LAHTSTDLKSCGLTVHCPHPLSR*PNYCCS
Trigger: AGAGCAGCAGTAGTTGGGGCATCTAGAGAGGGGATG...GGGGCAGTGGACTGTTAACCCACATGACTTCAGGTCAGTTGAGGTATGAGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR CCA 90 bp ACAGAGGTCAGCACTAGGTTCCTAACTAGTGGCCTCTGTAGCCTGGGTTCTTTCCTACTGCTGCTCTGCTaGTATGGCTGGACTTGCAGA +
Preference number: 2 (lower is better)
Translates to: TEVSTRFLTSGLCSLGSFLLLLC*YGWTCR
Trigger: TCTGCAAGTCCAGCCATACCAGCAGAGCAGCAGTAG...GAAAGAACCCAGGCTACAGAGGCCACTAGTTAGGAACCTAGTGCTGACCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR CCA 90 bp TCTGCCCAGAAGCCAGAGCTGGGGATTTTGATGAAGGAACGAGAGTCCTCATCCGTGGCCTCTGTAGCCTaGGTTCTTTCAAGGCATCAT +
Preference number: 2 (lower is better)
Translates to: SAQKPELGILMKERESSSVASVA*VLSRHH
Trigger: ATGATGCCTTGAAAGAACCCAGGCTACAGAGGCCAC...GGATGAGGACTCTCGTTCCTTCATCAAAATCCCCAGCTCTGGCTTCTGGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR GCA 90 bp CAGGCATCTGCCCAGAAGCCAGAGCTGGGGATTTTGATGAAGGAACGAGAGTCCTGGGCATACAGTAGGTaGCTAATTCTTGCCTACTAC +
Preference number: 2 (lower is better)
Translates to: QASAQKPELGILMKERESWAYSR*LILAYY
Trigger: GTAGTAGGCAAGAATTAGGCACCTACTGTATGCCCA...GGACTCTCGTTCCTTCATCAAAATCCCCAGCTCTGGCTTCTGGGCAGATGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR TCA 90 bp AGTCAGGGTTTATTGTTGAGACTTATCAGACTAGGCTACTCCAGGGCTGGAAGGTGCATTCTCCACTTCTaGCGAGGCCAAGATTCCCCA +
Preference number: 2 (lower is better)
Translates to: SQGLLLRLIRLGYSRAGRCILHF*RGQDSP
Trigger: TGGGGAATCTTGGCCTCGTCAGAAGTGGAGAATGCA...CCTTCCAGCCCTGGAGTAGCCTAGTCTGATAAGTCTCAACAATAAACCCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR GCA 90 bp AGTCAGGGTTTATTGTTGAGACTTATCAGACTAGGCTACTCCAGGGCTGGAAGGCAACTACTGCTGCTCTaGTGGTATGGCTGGACTTGC +
Preference number: 2 (lower is better)
Translates to: SQGLLLRLIRLGYSRAGRQLLLL*WYGWTC
Trigger: GCAAGTCCAGCCATACCAGCAGAGCAGCAGTAGTTG...CCTTCCAGCCCTGGAGTAGCCTAGTCTGATAAGTCTCAACAATAAACCCTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR TCA 90 bp TCAGGGTTTATTGTTGAGACTTATCAGACTAGGCTACTCCAGGGCTGGAAGGTCAGAGCCCAAGTAATTTaGGGGCATCATCACTGCTCC +
Preference number: 2 (lower is better)
Translates to: SGFIVETYQTRLLQGWKVRAQVI*GHHHCS
Trigger: GGAGCAGTGATGATGCCCTCAAATTACTTGGGCTCT...GACCTTCCAGCCCTGGAGTAGCCTAGTCTGATAAGTCTCAACAATAAACCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR GCA 90 bp TCAGGGTTTATTGTTGAGACTTATCAGACTAGGCTACTCCAGGGCTGGAAGGTCAGTCGCTCCCAGCGATaGTCAATCACTAGCCCATTA +
Preference number: 2 (lower is better)
Translates to: SGFIVETYQTRLLQGWKVSRSQR*SITSPL
Trigger: TAATGGGCTAGTGATTGAGCATCGCTGGGAGCGACT...GACCTTCCAGCCCTGGAGTAGCCTAGTCTGATAAGTCTCAACAATAAACCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR TCA 90 bp TATCCTGCTCATCTCCTCCATAGAGTTTGCACACTCTCTTCTTTTCTGGAGTTACCCTACCCTGTTCACTaGCATTGTGACCCACCAGCT +
Preference number: 2 (lower is better)
Translates to: YPAHLLHRVCTLSSFLELPYPVH*HCDPPA
Trigger: AGCTGGTGGGTCACAATGTCAGTGAACAGGGTAGGG...TAACTCCAGAAAAGAAGAGAGTGTGCAAACTCTATGGAGGAGATGAGCAGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR CCA 90 bp AGTCAGGGTTTATTGTTGAGACTTATCAGACTAGGCTACTCCAGGGCTGGAAGGCGCATAACACTGTATTaGGCATACAGTAGGTGCCTA +
Preference number: 2 (lower is better)
Translates to: SQGLLLRLIRLGYSRAGRRITLY*AYSRCL
Trigger: TAGGCACCTACTGTATGCCCAATACAGTGTTATGCG...CCTTCCAGCCCTGGAGTAGCCTAGTCTGATAAGTCTCAACAATAAACCCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR TCA 72 bp CCCCATGGGCCTCAGGTCCTGGGGGATGGAGACCAATaGGAACCACCCAGAGAAGTCTTCCCAAGGCCATGG +
Preference number: 3 (lower is better)
Translates to: PHGPQVLGDGDQ*EPPREVFPRPW
Trigger: CCATGGCCTTGGGAAGACTTCTCTGGGTGGTTCTCATTGGTCTCCATCCCCCAGGACCTGAGGCCCATGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR CCA 72 bp CCACCCAGAGAAGTCTTCCCAAGGCCATGGAGAGGCTaGAAAGGGCTGGGACAGGCATCTGCCCAGAAGCCA +
Preference number: 3 (lower is better)
Translates to: PPREVFPRPWRG*KGLGQASAQKP
Trigger: TGGCTTCTGGGCAGATGCCTGTCCCAGCCCTTTCCAGCCTCTCCATGGCCTTGGGAAGACTTCTCTGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR CCA 72 bp GGCCAAGATTCCCCATGGGCCTCAGGTCCTGGGGGATaGAGACCAATGAGAACCACCCAGAGAAGTCTTCCC +
Preference number: 3 (lower is better)
Translates to: GQDSPWASGPGG*RPMRTTQRSLP
Trigger: GGGAAGACTTCTCTGGGTGGTTCTCATTGGTCTCCATCCCCCAGGACCTGAGGCCCATGGGGAATCTTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR CCA 72 bp AGGTCCCAGGCTTCTGAGGGCAGCATTCTCCAGGGTTaGGACATAGGCCAGGAGAAGAGGCAGCTAGGTGCA +
Preference number: 3 (lower is better)
Translates to: RSQASEGSILQG*DIGQEKRQLGA
Trigger: TGCACCTAGCTGCCTCTTCTCCTGGCCTATGTCCCAACCCTGGAGAATGCTGCCCTCAGAAGCCTGGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR GCA 72 bp GCCCAGTCTCATCCCCTCTCTAGATGCCCCAACTACTaGTGCTCTGCTGGTATGGCTGGACTTGCAGAGACC +
Preference number: 3 (lower is better)
Translates to: AQSHPLSRCPNY*CSAGMAGLAET
Trigger: GGTCTCTGCAAGTCCAGCCATACCAGCAGAGCAGCAGTAGTTGGGGCATCTAGAGAGGGGATGAGACTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR GCA 72 bp CAGTCTCATCCCCTCTCTAGATGCCCCAACTACTGCTaGTCTGCTGGTATGGCTGGACTTGCAGAGACCCTC +
Preference number: 3 (lower is better)
Translates to: QSHPLSRCPNYC*SAGMAGLAETL
Trigger: GAGGGTCTCTGCAAGTCCAGCCATACCAGCAGAGCAGCAGTAGTTGGGGCATCTAGAGAGGGGATGAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR CCA 72 bp TCTCTAGATGCCCCAACTACTGCTGCTCTGCTGGTATaGCTGGACTTGCAGAGACCCTCCCCATCTGCTCCA +
Preference number: 3 (lower is better)
Translates to: SLDAPTTAALLV*LDLQRPSPSAP
Trigger: TGGAGCAGATGGGGAGGGTCTCTGCAAGTCCAGCCATACCAGCAGAGCAGCAGTAGTTGGGGCATCTAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR CCA 72 bp GCAATGCAGGCAGCCCAGGTCAGGAAAACGAAGAGCTaGGTGAGCCAATGCTGCACAGAGGATGGTAGAGCA +
Preference number: 3 (lower is better)
Translates to: AMQAAQVRKTKS*VSQCCTEDGRA
Trigger: TGCTCTACCATCCTCTGTGCAGCATTGGCTCACCCAGCTCTTCGTTTTCCTGACCTGGGCTGCCTGCATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR GCA 72 bp AGGTCTCACTCCAGGCTCAGCTCAGTCATTATCTGCTaGAAGCTGGCCCAGTCTCATCCCCTCTCTAGATGC +
Preference number: 3 (lower is better)
Translates to: RSHSRLSSVIIC*KLAQSHPLSRC
Trigger: GCATCTAGAGAGGGGATGAGACTGGGCCAGCTTGCAGCAGATAATGACTGAGCTGAGCCTGGAGTGAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR GCA 72 bp CACAGGTCTCACTCCAGGCTCAGCTCAGTCATTATCTaGTGCAAGCTGGCCCAGTCTCATCCCCTCTCTAGA +
Preference number: 3 (lower is better)
Translates to: HRSHSRLSSVII*CKLAQSHPLSR
Trigger: TCTAGAGAGGGGATGAGACTGGGCCAGCTTGCAGCAGATAATGACTGAGCTGAGCCTGGAGTGAGACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR CCA 72 bp ACTCCAGGCTCAGCTCAGTCATTATCTGCTGCAAGCTaGCCCAGTCTCATCCCCTCTCTAGATGCCCCAACT +
Preference number: 3 (lower is better)
Translates to: TPGSAQSLSAAS*PSLIPSLDAPT
Trigger: AGTTGGGGCATCTAGAGAGGGGATGAGACTGGGCCAGCTTGCAGCAGATAATGACTGAGCTGAGCCTGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR CAA 90 bp TCAGGTCCTGGGGGATGGAGACCAATGAGAACCACCCAGAGAAGTCTTCCCAAGCCAGAGCTGGGGATTTaGATGAAGGAACGAGAGTCC +
Preference number: 3 (lower is better)
Translates to: SGPGGWRPMRTTQRSLPKPELGI*MKERES
Trigger: GGACTCTCGTTCCTTCATCAAAATCCCCAGCTCTGG...CTTGGGAAGACTTCTCTGGGTGGTTCTCATTGGTCTCCATCCCCCAGGACCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR GCA 72 bp TCAACTGACCTGAAGTCATGTGGGTTAACAGTCCACTaGCCCGTGGTGATGGCAAAAACAGGGTGGGCAAGG +
Preference number: 3 (lower is better)
Translates to: STDLKSCGLTVH*PVVMAKTGWAR
Trigger: CCTTGCCCACCCTGTTTTTGCCATCACCACGGGGCAGTGGACTGTTAACCCACATGACTTCAGGTCAGTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR CAA 90 bp GCTGACACTGCATTCTCCACTTCTGACGAGGCCAAGATTCCCCATGGGCCTCAGAAGATGAGGCAGGATTaGGCTCATACCTCAACTGAC +
Preference number: 3 (lower is better)
Translates to: ADTAFSTSDEAKIPHGPQKMRQD*AHTSTD
Trigger: GTCAGTTGAGGTATGAGCCAAATCCTGCCTCATCTT...CTGAGGCCCATGGGGAATCTTGGCCTCGTCAGAAGTGGAGAATGCAGTGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR TCA 72 bp AAATCCCAACTCCCCCTACCCTGTTCACTGACATTGTaGCCCACCAGCTCTCAGCAGAGCCCAAGTAATTTG +
Preference number: 3 (lower is better)
Translates to: KSQLPLPCSLTL*PTSSQQSPSNL
Trigger: CAAATTACTTGGGCTCTGCTGAGAGCTGGTGGGTCACAATGTCAGTGAACAGGGTAGGGGGAGTTGGGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR GCA 72 bp CAGGATCTCTGCCCTTACAATCCACACACGTGGTTGTaGACACACAATGATGTTACAGCCAGGGGTCCAATG +
Preference number: 3 (lower is better)
Translates to: QDLCPYNPHTWL*THNDVTARGPM
Trigger: CATTGGACCCCTGGCTGTAACATCATTGTGTGTGCACAACCACGTGTGTGGATTGTAAGGGCAGAGATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR CAA 90 bp GCTCACTTAACAGGATCTCTGCCCTTACAATCCACACACGTGGTTGTGCACACAGTAGAAAGAGGGAAGTaGCCAGCTACTTCTAAGGCC +
Preference number: 3 (lower is better)
Translates to: AHLTGSLPLQSTHVVVHTVERGK*PATSKA
Trigger: GGCCTTAGAAGTAGCTGGCAACTTCCCTCTTTCTAC...TGTGTGCACAACCACGTGTGTGGATTGTAAGGGCAGAGATCCTGTTAAGTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR-3UTR CAA 90 bp TATCCTGCTCATCTCCTCCATAGAGTTTGCACACTCTCTTCTTTTCTGGAGTTAACTCTGTGGATCAAGTaGTGTGTAAACCTTTTTGTT +
Preference number: 3 (lower is better)
Translates to: YPAHLLHRVCTLSSFLELTLWIK*CVNLFV
Trigger: AACAAAAAGGTTTACACACAACTTGATCCACAGAGT...TAACTCCAGAAAAGAAGAGAGTGTGCAAACTCTATGGAGGAGATGAGCAGGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp GGCCGGCCTCACACACTCAGCCATAGCTCAGGGAGGAGTCGCGGCGTCTCCTCCCGGAAGAAGCCACAGTaGTCCACCAGCAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: GRPHTLSHSSGRSRGVSSRKKPQ*STSRAR
Trigger: CCGCGCCCTGCTGGTGGAGCACTGTGGCTTCTTCCG...GGAGGAGACGCCGCGACTCCTCCCTGAGCTATGGCTGAGTGTGTGAGGCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp GGCCGGCCTCACACACTCAGCCATAGCTCAGGGAGGAGTCGCGGCGTCTCCTCCCGCGTCGCACAGCAATaGGCAGTTGTCCGACGTGAG +
Preference number: 4 (lower is better)
Translates to: GRPHTLSHSSGRSRGVSSRVAQQ*AVVRRE
Trigger: CTCACGTCGGACAACTGCGCATTGCTGTGCGACGCG...GGAGGAGACGCCGCGACTCCTCCCTGAGCTATGGCTGAGTGTGTGAGGCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR TCA 90 bp GCCGGCCTCACACACTCAGCCATAGCTCAGGGAGGAGTCGCGGCGTCTCCTCCCCGCAGTTGTCCGACGTaGGGTTGTGCTCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: AGLTHSAIAQGGVAASPPRSCPT*GCAPES
Trigger: GCTTTCTGGAGCACAACCTCACGTCGGACAACTGCG...GGGAGGAGACGCCGCGACTCCTCCCTGAGCTATGGCTGAGTGTGTGAGGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp GGCCTCAGGTCCTGGGGGATGGAGACCAATGAGAACCACCCAGAGAAGTCTTCCGCCCAGGCGCACCTCTaGTGCGCGGGTCTCCCGCAT +
Preference number: 4 (lower is better)
Translates to: GLRSWGMETNENHPEKSSAQAHL*CAGLPH
Trigger: ATGCGGGAGACCCGCGCAGCAGAGGTGCGCCTGGGC...GGAAGACTTCTCTGGGTGGTTCTCATTGGTCTCCATCCCCCAGGACCTGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp GCCGGCCTCACACACTCAGCCATAGCTCAGGGAGGAGTCGCGGCGTCTCCTCCCTCCGACGTGAGGTTGTaGTCCAGAAAGCGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: AGLTHSAIAQGGVAASPPSDVRL*SRKRAS
Trigger: GCTGGCTCGCTTTCTGGAGCACAACCTCACGTCGGA...GGGAGGAGACGCCGCGACTCCTCCCTGAGCTATGGCTGAGTGTGTGAGGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp GCTGACACTGCATTCTCCACTTCTGACGAGGCCAAGATTCCCCATGGGCCTCAGACGCCGGCGGCCGGCTaGGGCAGGTCGGCCACGAAA +
Preference number: 4 (lower is better)
Translates to: ADTAFSTSDEAKIPHGPQTPAAG*GRSATK
Trigger: TTTCGTGGCCGACCTGCCGCAGCCGGCCGCCGGCGT...CTGAGGCCCATGGGGAATCTTGGCCTCGTCAGAAGTGGAGAATGCAGTGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR TCA 90 bp GCCGGCCTCACACACTCAGCCATAGCTCAGGGAGGAGTCGCGGCGTCTCCTCCCAAACGAAGAGCTGGGTaGGCCAATGCTGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: AGLTHSAIAQGGVAASPPKRRAG*ANAAQR
Trigger: CCTCTGTGCAGCATTGGCTCACCCAGCTCTTCGTTT...GGGAGGAGACGCCGCGACTCCTCCCTGAGCTATGGCTGAGTGTGTGAGGCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp AAAAAGGAACGTGAAGAATCCTCTCGCCCCCACAGGTCTCACTCCAGGCTCAGCAGACGGCCACAAGCCTaGGCGCAGGGCACGCCGGCG +
Preference number: 4 (lower is better)
Translates to: KKEREESSRPHRSHSRLSRRPQA*AQGTPA
Trigger: CGCCGGCGTGCCCTGCGCCCAGGCTTGTGGCCGTCT...GCTGAGCCTGGAGTGAGACCTGTGGGGGCGAGAGGATTCTTCACGTTCCTTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp GCTCTCAGCCTCCATGGTCTAAGCCTCCCCTTTCAGCAGCTAATGGTATCCTGCCCGCAGCTCGGCCACTaGCAGCCACGCGTCGGTCCG +
Preference number: 4 (lower is better)
Translates to: ALSLHGLSLPFQQLMVSCPQLGH*QPRVGP
Trigger: CGGACCGACGCGTGGCTGCCAGTGGCCGAGCTGCGG...GCAGGATACCATTAGCTGCTGAAAGGGGAGGCTTAGACCATGGAGGCTGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR TCA 90 bp GCTGACACTGCATTCTCCACTTCTGACGAGGCCAAGATTCCCCATGGGCCTCAGGCGCTCCCTTGCTGTTaGCGAACTGGCCGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: ADTAFSTSDEAKIPHGPQALPCC*RTGRAA
Trigger: CGCTGCCCGGCCAGTTCGTCAACAGCAAGGGAGCGC...CTGAGGCCCATGGGGAATCTTGGCCTCGTCAGAAGTGGAGAATGCAGTGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR TCA 90 bp GCCGGCCTCACACACTCAGCCATAGCTCAGGGAGGAGTCGCGGCGTCTCCTCCCTGTTCACTGACATTGTaGCCCACCAGCTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGLTHSAIAQGGVAASPPCSLTL*PTSSQQ
Trigger: CTGCTGAGAGCTGGTGGGTCACAATGTCAGTGAACA...GGGAGGAGACGCCGCGACTCCTCCCTGAGCTATGGCTGAGTGTGTGAGGCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp GCTCTCAGCCTCCATGGTCTAAGCCTCCCCTTTCAGCAGCTAATGGTATCCTGCTGGCCGGGCGGAGGCTaGCGCTGGGGCCTTGGGTTA +
Preference number: 4 (lower is better)
Translates to: ALSLHGLSLPFQQLMVSCWPGGG*RWGLGL
Trigger: TAACCCAAGGCCCCAGCGGCAGCCTCCGCCCGGCCA...GCAGGATACCATTAGCTGCTGAAAGGGGAGGCTTAGACCATGGAGGCTGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp TCTCCACTTCTGACGAGGCCAAGATTCCCCATGGGCCTCAGGTCCTGGGGGATGCCAGGTAACACAGCGTaGGCGAGGCGTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SPLLTRPRFPMGLRSWGMPGNTA*ARRPPG
Trigger: TCCTGGAGGACGCCTCGCGCACGCTGTGTTACCTGG...CATCCCCCAGGACCTGAGGCCCATGGGGAATCTTGGCCTCGTCAGAAGTGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp GCCGGCCTCACACACTCAGCCATAGCTCAGGGAGGAGTCGCGGCGTCTCCTCCCGGGTTAACAGTCCACTaGCCCGTGGTGATGGCAAAA +
Preference number: 4 (lower is better)
Translates to: AGLTHSAIAQGGVAASPPGLTVH*PVVMAK
Trigger: TTTTGCCATCACCACGGGGCAGTGGACTGTTAACCC...GGGAGGAGACGCCGCGACTCCTCCCTGAGCTATGGCTGAGTGTGTGAGGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp GCTCTCAGCCTCCATGGTCTAAGCCTCCCCTTTCAGCAGCTAATGGTATCCTGCGGCGGAGGCTGCCGCTaGGGCCTTGGGTTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: ALSLHGLSLPFQQLMVSCGGGCR*GLGLAS
Trigger: GCTGGCTAACCCAAGGCCCCAGCGGCAGCCTCCGCC...GCAGGATACCATTAGCTGCTGAAAGGGGAGGCTTAGACCATGGAGGCTGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp ACACCACCAGAAGGCACCAAACCTGGGTGTCTCAGTAGAAAGAGGGAAGTTGCCGTGGACCCCGTGCCATaGCGAGCTGGCCGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: TPPEGTKPGCLSRKREVAVDPVP*RAGRAE
Trigger: CTCCGCCCGGCCAGCTCGCCATGGCACGGGGTCCAC...GGCAACTTCCCTCTTTCTACTGAGACACCCAGGTTTGGTGCCTTCTGGTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp CAGGCATCTGCCCAGAAGCCAGAGCTGGGGATTTTGATGAAGGAACGAGAGTCCCCAGCAGCCCGCGGCTaGGTCGTAGCGCTCCACGGA +
Preference number: 4 (lower is better)
Translates to: QASAQKPELGILMKERESPAARG*VVALHG
Trigger: TCCGTGGAGCGCTACGACCCAGCCGCGGGCTGCTGG...GGACTCTCGTTCCTTCATCAAAATCCCCAGCTCTGGCTTCTGGGCAGATGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp GCCGGCCTCACACACTCAGCCATAGCTCAGGGAGGAGTCGCGGCGTCTCCTCCCAGCTCTCAGCCTCCATaGTCTAAGCCTCCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: AGLTHSAIAQGGVAASPPSSQPP*SKPPLS
Trigger: TGAAAGGGGAGGCTTAGACCATGGAGGCTGAGAGCT...GGGAGGAGACGCCGCGACTCCTCCCTGAGCTATGGCTGAGTGTGTGAGGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp TCTGCCCAGAAGCCAGAGCTGGGGATTTTGATGAAGGAACGAGAGTCCTCATCCGGTCTGTGGACCCCGTaGCATGGCGAGCTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: SAQKPELGILMKERESSSGLWTP*HGELAG
Trigger: CCCGGCCAGCTCGCCATGGCACGGGGTCCACAGACC...GGATGAGGACTCTCGTTCCTTCATCAAAATCCCCAGCTCTGGCTTCTGGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp TCATCACTGCTCCCTGAGCTTCTTGAACATGTCCACACCACCAGAAGGCACCAAGGGCTGGGGAACTCGTaGCACGTGCCGCCGTCGGGG +
Preference number: 4 (lower is better)
Translates to: SSLLPELLEHVHTTRRHQGLGNS*HVPPSG
Trigger: CCCCGACGGCGGCACGTGGCACGAGTTCCCCAGCCC...TTGGTGCCTTCTGGTGGTGTGGACATGTTCAAGAAGCTCAGGGAGCAGTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp ACACCACCAGAAGGCACCAAACCTGGGTGTCTCAGTAGAAAGAGGGAAGTTGCCGCAGCACCTGCAGCGTaGCGCGGAAACCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: TPPEGTKPGCLSRKREVAAAPAA*RGNLPR
Trigger: GCGCGGGAGGTTTCCGCGCCACGCTGCAGGTGCTGC...GGCAACTTCCCTCTTTCTACTGAGACACCCAGGTTTGGTGCCTTCTGGTGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp GTCTCACTCCAGGCTCAGCTCAGTCATTATCTGCTGCAAGCTGGCCCAGTCTCAGCTTGTTGCCCAGCGTaGCCACCCCGGCCAGCAACG +
Preference number: 4 (lower is better)
Translates to: VSLQAQLSHYLLQAGPVSACCPA*PPRPAT
Trigger: CGTTGCTGGCCGGGGTGGCCACGCTGGGCAACAAGC...TGAGACTGGGCCAGCTTGCAGCAGATAATGACTGAGCTGAGCCTGGAGTGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp ACACCACCAGAAGGCACCAAACCTGGGTGTCTCAGTAGAAAGAGGGAAGTTGCCACTCCACCACGGCGGTaGTGTCGGCCGGCCGCCACA +
Preference number: 4 (lower is better)
Translates to: TPPEGTKPGCLSRKREVATPPRR*CRPAAT
Trigger: TGTGGCGGCCGGCCGACACCACCGCCGTGGTGGAGT...GGCAACTTCCCTCTTTCTACTGAGACACCCAGGTTTGGTGCCTTCTGGTGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR TCA 90 bp ACACCACCAGAAGGCACCAAACCTGGGTGTCTCAGTAGAAAGAGGGAAGTTGCCCGCGCACCACGGCCGTaGAGAGCGCTCCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TPPEGTKPGCLSRKREVARAPRP*RALPCC
Trigger: ACAGCAAGGGAGCGCTCTTCACGGCCGTGGTGCGCG...GGCAACTTCCCTCTTTCTACTGAGACACCCAGGTTTGGTGCCTTCTGGTGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp TCTGCCCAGAAGCCAGAGCTGGGGATTTTGATGAAGGAACGAGAGTCCTCATCCCGCGTCGGTCCGCACTaGGTACTCCACCACGGCGGT +
Preference number: 4 (lower is better)
Translates to: SAQKPELGILMKERESSSRVGPH*VLHHGG
Trigger: ACCGCCGTGGTGGAGTACGCAGTGCGGACCGACGCG...GGATGAGGACTCTCGTTCCTTCATCAAAATCCCCAGCTCTGGCTTCTGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp GTCTCACTCCAGGCTCAGCTCAGTCATTATCTGCTGCAAGCTGGCCCAGTCTCACGCGGTGGGCCACCATaGAGTGGCCATAGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: VSLQAQLSHYLLQAGPVSRGGPP*SGHSSA
Trigger: CGCAGAGCTATGGCCACTGCATGGTGGCCCACCGCG...TGAGACTGGGCCAGCTTGCAGCAGATAATGACTGAGCTGAGCCTGGAGTGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp TCAGGTCCTGGGGGATGGAGACCAATGAGAACCACCCAGAGAAGTCTTCCCAAGTGGCGCGAGCCTCCATaGCCCGGAGGTGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: SGPGGWRPMRTTQRSLPKWREPP*PGGVML
Trigger: CAGCATGACACCTCCGGGGCATGGAGGCTCGCGCCA...CTTGGGAAGACTTCTCTGGGTGGTTCTCATTGGTCTCCATCCCCCAGGACCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp GCTCTCAGCCTCCATGGTCTAAGCCTCCCCTTTCAGCAGCTAATGGTATCCTGCGGAATTCGCCGCCGATaGCGTAGAGGCGGCCGTCGA +
Preference number: 4 (lower is better)
Translates to: ALSLHGLSLPFQQLMVSCGIRRR*RRGGRR
Trigger: TCGACGGCCGCCTCTACGCCATCGGCGGCGAATTCC...GCAGGATACCATTAGCTGCTGAAAGGGGAGGCTTAGACCATGGAGGCTGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp TCTGCCCAGAAGCCAGAGCTGGGGATTTTGATGAAGGAACGAGAGTCCTCATCCGGCAGCGCCGTCCACTaGCCCGTGGCCAGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: SAQKPELGILMKERESSSGSAVH*PVARLR
Trigger: TCTCAACCTGGCCACGGGCCAGTGGACGGCGCTGCC...GGATGAGGACTCTCGTTCCTTCATCAAAATCCCCAGCTCTGGCTTCTGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR TCA 90 bp ACACCACCAGAAGGCACCAAACCTGGGTGTCTCAGTAGAAAGAGGGAAGTTGCCGCTCGCCGTCGCAGATaGAGAGCGCGGCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: TPPEGTKPGCLSRKREVAARRRR*RARHCG
Trigger: TCCACAGTGCCGCGCTCTTCATCTGCGACGGCGAGC...GGCAACTTCCCTCTTTCTACTGAGACACCCAGGTTTGGTGCCTTCTGGTGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR TCA 90 bp CTGGGTTATCCTTTAAGCTTCCTGGATCCCTGTGTGGCAACTACGGCTCTCATTAGCCGGCTTTCTCCCTaGGCAGCCGCCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: LGYPLSFLDPCVATTALISRLSP*AAARCR
Trigger: GCGGCACCTGGCGGCTGCTCAGGGAGAAAGCCGGCT...AATGAGAGCCGTAGTTGCCACACAGGGATCCAGGAAGCTTAAAGGATAACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp GCTCACTTAACAGGATCTCTGCCCTTACAATCCACACACGTGGTTGTGCACACACAGGCGCACCTCTGCTaGGCGGGTCTCCCGCATGCC +
Preference number: 4 (lower is better)
Translates to: AHLTGSLPLQSTHVVVHTQAHLC*AGLPHA
Trigger: GGCATGCGGGAGACCCGCGCAGCAGAGGTGCGCCTG...TGTGTGCACAACCACGTGTGTGGATTGTAAGGGCAGAGATCCTGTTAAGTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp ACAGAGGTCAGCACTAGGTTCCTAACTAGTGGCCTCTGTAGCCTGGGTTCTTTCTCGCCGCGCAGCACCTaGAGCGTGGCGCGGAAACCT +
Preference number: 4 (lower is better)
Translates to: TEVSTRFLTSGLCSLGSFSPRST*SVARKP
Trigger: AGGTTTCCGCGCCACGCTGCAGGTGCTGCGCGGCGA...GAAAGAACCCAGGCTACAGAGGCCACTAGTTAGGAACCTAGTGCTGACCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp TTGGCTCATACCTCAACTGACCTGAAGTCATGTGGGTTAACAGTCCACTGCCCCGCAGCGCAGCCAGCGTaGGCCACGCGTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LAHTSTDLKSCGLTVHCPAAQPA*ATRPLP
Trigger: AGGAAGAGGACGCGTGGCGCACGCTGGCTGCGCTGC...GGGGCAGTGGACTGTTAACCCACATGACTTCAGGTCAGTTGAGGTATGAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp TCATCACTGCTCCCTGAGCTTCTTGAACATGTCCACACCACCAGAAGGCACCAAGGAACTCGTGCCACGTaGCGCCGTCGGGGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: SSLLPELLEHVHTTRRHQGTRAT*RRRGRS
Trigger: GCTACGACCCCGACGGCGGCACGTGGCACGAGTTCC...TTGGTGCCTTCTGGTGGTGTGGACATGTTCAAGAAGCTCAGGGAGCAGTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp GCTCACTTAACAGGATCTCTGCCCTTACAATCCACACACGTGGTTGTGCACACAGCGGCTGGTGCGGGCTaGGGAACTCGTGCCACGTGC +
Preference number: 4 (lower is better)
Translates to: AHLTGSLPLQSTHVVVHTAAGAG*GTRATC
Trigger: GCACGTGGCACGAGTTCCCCAGCCCGCACCAGCCGC...TGTGTGCACAACCACGTGTGTGGATTGTAAGGGCAGAGATCCTGTTAAGTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR TCA 90 bp GTCTCACTCCAGGCTCAGCTCAGTCATTATCTGCTGCAAGCTGGCCCAGTCTCATCCACTGCCCCGTGGTaGTGGCAAAAACAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VSLQAQLSHYLLQAGPVSSTAPW*WQKQGG
Trigger: CCCACCCTGTTTTTGCCATCACCACGGGGCAGTGGA...TGAGACTGGGCCAGCTTGCAGCAGATAATGACTGAGCTGAGCCTGGAGTGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp CTGGGTTATCCTTTAAGCTTCCTGGATCCCTGTGTGGCAACTACGGCTCTCATTCCGCCCACCCACACCTaGACCAGGGTCTGTGGACCC +
Preference number: 4 (lower is better)
Translates to: LGYPLSFLDPCVATTALIPPTHT*TRVCGP
Trigger: GGGTCCACAGACCCTGGTGCAGGTGTGGGTGGGCGG...AATGAGAGCCGTAGTTGCCACACAGGGATCCAGGAAGCTTAAAGGATAACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp AGTCAGGGTTTATTGTTGAGACTTATCAGACTAGGCTACTCCAGGGCTGGAAGGCGCGGGTCTCCCGCATaGCGGAGCGGAAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SQGLLLRLIRLGYSRAGRRGSPA*RSGRGL
Trigger: GAGGCCTCTTCCGCTCCGGCATGCGGGAGACCCGCG...CCTTCCAGCCCTGGAGTAGCCTAGTCTGATAAGTCTCAACAATAAACCCTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp CGCTCCCAGCGATGCTCAATCACTAGCCCATTACATATAAGCCCGGATTATTCAGCTCTACCACCTCCTTaGTGGCGCCGCGCACGCCCC +
Preference number: 4 (lower is better)
Translates to: RSQRCSITSPLHISPDYSALPPP*WRRARP
Trigger: GGGGCGTGCGCGGCGCCAGCAAGGAGGTGGTAGAGC...TGAATAATCCGGGCTTATATGTAATGGGCTAGTGATTGAGCATCGCTGGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp CGTGAAGAATCCTCTCGCCCCCACAGGTCTCACTCCAGGCTCAGCTCAGTCATTCAGTCGATGGCGCAGTaGAGGAAGTCGTCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: REESSRPHRSHSRLSSVIQSMAQ*RKSSEG
Trigger: ACCTTCCGACGACTTCCTGCACTGCGCCATCGACTG...AATGACTGAGCTGAGCCTGGAGTGAGACCTGTGGGGGCGAGAGGATTCTTCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp TTGGCTCATACCTCAACTGACCTGAAGTCATGTGGGTTAACAGTCCACTGCCCCGAAGAGGCAGCTAGGTaGAGCCCTGGCGCGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LAHTSTDLKSCGLTVHCPEEAAR*SPGASL
Trigger: GAGGCTCGCGCCAGGGCTGCACCTAGCTGCCTCTTC...GGGGCAGTGGACTGTTAACCCACATGACTTCAGGTCAGTTGAGGTATGAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp ACAGAGGTCAGCACTAGGTTCCTAACTAGTGGCCTCTGTAGCCTGGGTTCTTTCTCGGCTTGGAAGAGCTaGCCGCCCACCCACACCTGC +
Preference number: 4 (lower is better)
Translates to: TEVSTRFLTSGLCSLGSFSAWKS*PPTHTC
Trigger: GCAGGTGTGGGTGGGCGGCCAGCTCTTCCAAGCCGA...GAAAGAACCCAGGCTACAGAGGCCACTAGTTAGGAACCTAGTGCTGACCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp TTGAGGGCATCATCACTGCTCCCTGAGCTTCTTGAACATGTCCACACCACCAGAAAGAGCGCGGCACTGTaGAACACGTCGCGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LRASSLLPELLEHVHTTRKSAAL*NTSRRP
Trigger: CGGCCTGCGCGACGTGTTCCACAGTGCCGCGCTCTT...TCTGGTGGTGTGGACATGTTCAAGAAGCTCAGGGAGCAGTGATGATGCCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp ACACCACCAGAAGGCACCAAACCTGGGTGTCTCAGTAGAAAGAGGGAAGTTGCCGGCCAAGATTCCCCATaGGCCTCAGGTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: TPPEGTKPGCLSRKREVAGQDSP*ASGPGG
Trigger: TCCCCCAGGACCTGAGGCCCATGGGGAATCTTGGCC...GGCAACTTCCCTCTTTCTACTGAGACACCCAGGTTTGGTGCCTTCTGGTGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR TCA 90 bp GGCCTCAGGTCCTGGGGGATGGAGACCAATGAGAACCACCCAGAGAAGTCTTCCGTTGTGCACACACAATaGTGTTACAGCCAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GLRSWGMETNENHPEKSSVVHTQ*CYSQGS
Trigger: GGACCCCTGGCTGTAACATCATTGTGTGTGCACAAC...GGAAGACTTCTCTGGGTGGTTCTCATTGGTCTCCATCCCCCAGGACCTGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp ACAGAGGTCAGCACTAGGTTCCTAACTAGTGGCCTCTGTAGCCTGGGTTCTTTCCTTAGGAGAAAGGTCTaGAAGGAGCCGGGCCGCGGG +
Preference number: 4 (lower is better)
Translates to: TEVSTRFLTSGLCSLGSFLRRKV*KEPGRG
Trigger: CCCGCGGCCCGGCTCCTTGCAGACCTTTCTCCTAAG...GAAAGAACCCAGGCTACAGAGGCCACTAGTTAGGAACCTAGTGCTGACCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp ACAGAGGTCAGCACTAGGTTCCTAACTAGTGGCCTCTGTAGCCTGGGTTCTTTCCTGCCGCTGGGGCCTTaGGTTAGCCAGCCACCAACT +
Preference number: 4 (lower is better)
Translates to: TEVSTRFLTSGLCSLGSFLPLGP*VSQPPT
Trigger: AGTTGGTGGCTGGCTAACCCAAGGCCCCAGCGGCAG...GAAAGAACCCAGGCTACAGAGGCCACTAGTTAGGAACCTAGTGCTGACCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp TTGGCTCATACCTCAACTGACCTGAAGTCATGTGGGTTAACAGTCCACTGCCCCCTGATGGGCGTCCTCTaGAATTCGCCGCCGATGGCG +
Preference number: 4 (lower is better)
Translates to: LAHTSTDLKSCGLTVHCPLMGVL*NSPPMA
Trigger: CGCCATCGGCGGCGAATTCCAGAGGACGCCCATCAG...GGGGCAGTGGACTGTTAACCCACATGACTTCAGGTCAGTTGAGGTATGAGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp TTGAGGGCATCATCACTGCTCCCTGAGCTTCTTGAACATGTCCACACCACCAGATTGCTGTTGACGAACTaGCCGGGCAGCGCCGTCCAC +
Preference number: 4 (lower is better)
Translates to: LRASSLLPELLEHVHTTRLLLTN*PGSAVH
Trigger: GTGGACGGCGCTGCCCGGCCAGTTCGTCAACAGCAA...TCTGGTGGTGTGGACATGTTCAAGAAGCTCAGGGAGCAGTGATGATGCCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp CAGGCATCTGCCCAGAAGCCAGAGCTGGGGATTTTGATGAAGGAACGAGAGTCCGCTGCTCTGCTGGTATaGCTGGACTTGCAGAGACCC +
Preference number: 4 (lower is better)
Translates to: QASAQKPELGILMKERESAALLV*LDLQRP
Trigger: GGGTCTCTGCAAGTCCAGCCATACCAGCAGAGCAGC...GGACTCTCGTTCCTTCATCAAAATCCCCAGCTCTGGCTTCTGGGCAGATGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp TCTCCACTTCTGACGAGGCCAAGATTCCCCATGGGCCTCAGGTCCTGGGGGATGAGGAAAACGAAGAGCTaGGTGAGCCAATGCTGCACA +
Preference number: 4 (lower is better)
Translates to: SPLLTRPRFPMGLRSWGMRKTKS*VSQCCT
Trigger: TGTGCAGCATTGGCTCACCCAGCTCTTCGTTTTCCT...CATCCCCCAGGACCTGAGGCCCATGGGGAATCTTGGCCTCGTCAGAAGTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp ACACCACCAGAAGGCACCAAACCTGGGTGTCTCAGTAGAAAGAGGGAAGTTGCCAGGCCATGGAGAGGCTaGAAAGGGCTGGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: TPPEGTKPGCLSRKREVARPWRG*KGLGQA
Trigger: TGCCTGTCCCAGCCCTTTCCAGCCTCTCCATGGCCT...GGCAACTTCCCTCTTTCTACTGAGACACCCAGGTTTGGTGCCTTCTGGTGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR TCA 90 bp CGCTCCCAGCGATGCTCAATCACTAGCCCATTACATATAAGCCCGGATTATTCAGGCCCGTGGCCAGGTTaGGACAGTCGATGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: RSQRCSITSPLHISPDYSGPWPG*DSRWRS
Trigger: ACTGCGCCATCGACTGTCTCAACCTGGCCACGGGCC...TGAATAATCCGGGCTTATATGTAATGGGCTAGTGATTGAGCATCGCTGGGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR TCA 90 bp GGCCTCAGGTCCTGGGGGATGGAGACCAATGAGAACCACCCAGAGAAGTCTTCCAGAGCCCAAGTAATTTaGGGGCATCATCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLRSWGMETNENHPEKSSRAQVI*GHHHCS
Trigger: GGAGCAGTGATGATGCCCTCAAATTACTTGGGCTCT...GGAAGACTTCTCTGGGTGGTTCTCATTGGTCTCCATCCCCCAGGACCTGAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR TCA 90 bp ACAGAGGTCAGCACTAGGTTCCTAACTAGTGGCCTCTGTAGCCTGGGTTCTTTCAAGGTCCCAGGCTTCTaGGGGCAGCATTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TEVSTRFLTSGLCSLGSFKVPGF*GQHSPG
Trigger: CCCTGGAGAATGCTGCCCTCAGAAGCCTGGGACCTT...GAAAGAACCCAGGCTACAGAGGCCACTAGTTAGGAACCTAGTGCTGACCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp TATCCTGCTCATCTCCTCCATAGAGTTTGCACACTCTCTTCTTTTCTGGAGTTACCCCGGCCAGCAACGTaGTGGCCTCCAGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: YPAHLLHRVCTLSSFLELPRPAT*WPPGAA
Trigger: CGCTGCCCCTGGAGGCCAGCACGTTGCTGGCCGGGG...TAACTCCAGAAAAGAAGAGAGTGTGCAAACTCTATGGAGGAGATGAGCAGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp TCAGGTCCTGGGGGATGGAGACCAATGAGAACCACCCAGAGAAGTCTTCCCAAGTGGTATGGCTGGACTTaGAGAGACCCTCCCCATCTG +
Preference number: 4 (lower is better)
Translates to: SGPGGWRPMRTTQRSLPKWYGWT*RDPPHL
Trigger: CAGATGGGGAGGGTCTCTGCAAGTCCAGCCATACCA...CTTGGGAAGACTTCTCTGGGTGGTTCTCATTGGTCTCCATCCCCCAGGACCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp GCTGACACTGCATTCTCCACTTCTGACGAGGCCAAGATTCCCCATGGGCCTCAGCAACTACTGCTGCTCTaGTGGTATGGCTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: ADTAFSTSDEAKIPHGPQQLLLL*WYGWTC
Trigger: GCAAGTCCAGCCATACCAGCAGAGCAGCAGTAGTTG...CTGAGGCCCATGGGGAATCTTGGCCTCGTCAGAAGTGGAGAATGCAGTGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp CAGGCATCTGCCCAGAAGCCAGAGCTGGGGATTTTGATGAAGGAACGAGAGTCCGGGCTTACACCTGGGTaGTCCCCTAAGGGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: QASAQKPELGILMKERESGLTPG*SPKGSK
Trigger: TTTGGAACCCTTAGGGGAGCACCCAGGTGTAAGCCC...GGACTCTCGTTCCTTCATCAAAATCCCCAGCTCTGGCTTCTGGGCAGATGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp TCAGGGTTTATTGTTGAGACTTATCAGACTAGGCTACTCCAGGGCTGGAAGGTCCTGCACCAGGGTCTGTaGACCCCGTGCCATGGCGAG +
Preference number: 4 (lower is better)
Translates to: SGFIVETYQTRLLQGWKVLHQGL*TPCHGE
Trigger: CTCGCCATGGCACGGGGTCCACAGACCCTGGTGCAG...GACCTTCCAGCCCTGGAGTAGCCTAGTCTGATAAGTCTCAACAATAAACCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp CTGTTAAGATTGTTTTCTGGGTTATCCTTTAAGCTTCCTGGATCCCTGTGTGGCAGGGCGCGGTCGGCTTaGAAGAGCTGGCCGCCCACC +
Preference number: 4 (lower is better)
Translates to: LLRLFSGLSFKLPGSLCGRARSA*KSWPPT
Trigger: GGTGGGCGGCCAGCTCTTCCAAGCCGACCGCGCCCT...GCCACACAGGGATCCAGGAAGCTTAAAGGATAACCCAGAAAACAATCTTAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp CTGTTAAGATTGTTTTCTGGGTTATCCTTTAAGCTTCCTGGATCCCTGTGTGGCCGGCCAGCAACGTGCTaGCCTCCAGGGGCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LLRLFSGLSFKLPGSLCGRPATC*PPGAAQ
Trigger: CTGCGCTGCCCCTGGAGGCCAGCACGTTGCTGGCCG...GCCACACAGGGATCCAGGAAGCTTAAAGGATAACCCAGAAAACAATCTTAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp CGTGAAGAATCCTCTCGCCCCCACAGGTCTCACTCCAGGCTCAGCTCAGTCATTATGGCAAAAACAGGGTaGGCAAGGGCTTACACCTGG +
Preference number: 4 (lower is better)
Translates to: REESSRPHRSHSRLSSVIMAKTG*ARAYTW
Trigger: CCAGGTGTAAGCCCTTGCCCACCCTGTTTTTGCCAT...AATGACTGAGCTGAGCCTGGAGTGAGACCTGTGGGGGCGAGAGGATTCTTCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR TCA 90 bp CTGGGTTATCCTTTAAGCTTCCTGGATCCCTGTGTGGCAACTACGGCTCTCATTAGCGCTCCACGGAGCTaGTGGGCGTCCTCTGGAATT +
Preference number: 4 (lower is better)
Translates to: LGYPLSFLDPCVATTALISAPRS*WASSGI
Trigger: AATTCCAGAGGACGCCCATCAGCTCCGTGGAGCGCT...AATGAGAGCCGTAGTTGCCACACAGGGATCCAGGAAGCTTAAAGGATAACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR TCA 90 bp ACACCACCAGAAGGCACCAAACCTGGGTGTCTCAGTAGAAAGAGGGAAGTTGCCCCCTACCCTGTTCACTaGCATTGTGACCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: TPPEGTKPGCLSRKREVAPYPVH*HCDPPA
Trigger: AGCTGGTGGGTCACAATGTCAGTGAACAGGGTAGGG...GGCAACTTCCCTCTTTCTACTGAGACACCCAGGTTTGGTGCCTTCTGGTGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp TCTGCCCAGAAGCCAGAGCTGGGGATTTTGATGAAGGAACGAGAGTCCTCATCCTGCCCCAACTACTGCTaGTCTGCTGGTATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SAQKPELGILMKERESSSCPNYC*SAGMAG
Trigger: TCCAGCCATACCAGCAGAGCAGCAGTAGTTGGGGCA...GGATGAGGACTCTCGTTCCTTCATCAAAATCCCCAGCTCTGGCTTCTGGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp GCTCTCAGCCTCCATGGTCTAAGCCTCCCCTTTCAGCAGCTAATGGTATCCTGCCATCCCCTCTCTAGATaGCCCAACTACTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ALSLHGLSLPFQQLMVSCHPLSR*PNYCCS
Trigger: AGAGCAGCAGTAGTTGGGGCATCTAGAGAGGGGATG...GCAGGATACCATTAGCTGCTGAAAGGGGAGGCTTAGACCATGGAGGCTGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp GGCCTCAGGTCCTGGGGGATGGAGACCAATGAGAACCACCCAGAGAAGTCTTCCTCAGTCATTATCTGCTaGAAGCTGGCCCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GLRSWGMETNENHPEKSSSVIIC*KLAQSH
Trigger: ATGAGACTGGGCCAGCTTGCAGCAGATAATGACTGA...GGAAGACTTCTCTGGGTGGTTCTCATTGGTCTCCATCCCCCAGGACCTGAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp CAGGCATCTGCCCAGAAGCCAGAGCTGGGGATTTTGATGAAGGAACGAGAGTCCCTACTGCTGCTCTGCTaGTATGGCTGGACTTGCAGA +
Preference number: 4 (lower is better)
Translates to: QASAQKPELGILMKERESLLLLC*YGWTCR
Trigger: TCTGCAAGTCCAGCCATACCAGCAGAGCAGCAGTAG...GGACTCTCGTTCCTTCATCAAAATCCCCAGCTCTGGCTTCTGGGCAGATGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp TCAGGTCCTGGGGGATGGAGACCAATGAGAACCACCCAGAGAAGTCTTCCCAAGTTATCTGCTGCAAGCTaGCCCAGTCTCATCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SGPGGWRPMRTTQRSLPKLSAAS*PSLIPS
Trigger: AGAGGGGATGAGACTGGGCCAGCTTGCAGCAGATAA...CTTGGGAAGACTTCTCTGGGTGGTTCTCATTGGTCTCCATCCCCCAGGACCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR CAA 72 bp GCACCAAACCTGGGTGTCTCAGTAGAAAGAGGGAAGTaGCCAGCTACTTCTAAGGCCGGCCTCACACACTCA +
Preference number: 4 (lower is better)
Translates to: APNLGVSVERGK*PATSKAGLTHS
Trigger: TGAGTGTGTGAGGCCGGCCTTAGAAGTAGCTGGCAACTTCCCTCTTTCTACTGAGACACCCAGGTTTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR TCA 90 bp TCATCACTGCTCCCTGAGCTTCTTGAACATGTCCACACCACCAGAAGGCACCAAGGGGATGGAGACCAATaGGAACCACCCAGAGAAGTC +
Preference number: 4 (lower is better)
Translates to: SSLLPELLEHVHTTRRHQGDGDQ*EPPREV
Trigger: GACTTCTCTGGGTGGTTCTCATTGGTCTCCATCCCC...TTGGTGCCTTCTGGTGGTGTGGACATGTTCAAGAAGCTCAGGGAGCAGTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR TCA 90 bp TTGGCTCATACCTCAACTGACCTGAAGTCATGTGGGTTAACAGTCCACTGCCCCCCGGAGGTGTCATGCTaGCACTGCATTCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: LAHTSTDLKSCGLTVHCPPEVSC*HCILHF
Trigger: GAAGTGGAGAATGCAGTGTCAGCATGACACCTCCGG...GGGGCAGTGGACTGTTAACCCACATGACTTCAGGTCAGTTGAGGTATGAGCCAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp CGCTCCCAGCGATGCTCAATCACTAGCCCATTACATATAAGCCCGGATTATTCACGATGTAAAGCTTGTTaGCCAGCGTGGCCACCCCGG +
Preference number: 4 (lower is better)
Translates to: RSQRCSITSPLHISPDYSRCKAC*PAWPPR
Trigger: CCGGGGTGGCCACGCTGGGCAACAAGCTTTACATCG...TGAATAATCCGGGCTTATATGTAATGGGCTAGTGATTGAGCATCGCTGGGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp CGCTCCCAGCGATGCTCAATCACTAGCCCATTACATATAAGCCCGGATTATTCAGAGGCTGGAAAGGGCTaGGACAGGCATCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: RSQRCSITSPLHISPDYSEAGKG*DRHLPR
Trigger: TCTGGGCAGATGCCTGTCCCAGCCCTTTCCAGCCTC...TGAATAATCCGGGCTTATATGTAATGGGCTAGTGATTGAGCATCGCTGGGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp ACACCACCAGAAGGCACCAAACCTGGGTGTCTCAGTAGAAAGAGGGAAGTTGCCAGCATTCTCCAGGGTTaGGACATAGGCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TPPEGTKPGCLSRKREVASILQG*DIGQEK
Trigger: CTTCTCCTGGCCTATGTCCCAACCCTGGAGAATGCT...GGCAACTTCCCTCTTTCTACTGAGACACCCAGGTTTGGTGCCTTCTGGTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
3UTR CAA 72 bp GGACAGGCATCTGCCCAGAAGCCAGAGCTGGGGATTTaGATGAAGGAACGAGAGTCCTCATCCAACAACAGA +
Preference number: 4 (lower is better)
Translates to: GQASAQKPELGI*MKERESSSNNR
Trigger: TCTGTTGTTGGATGAGGACTCTCGTTCCTTCATCAAAATCCCCAGCTCTGGCTTCTGGGCAGATGCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp AGTCAGGGTTTATTGTTGAGACTTATCAGACTAGGCTACTCCAGGGCTGGAAGGGGGTCCAATGAGCAATaGAGGCAGCCCAGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: SQGLLLRLIRLGYSRAGRGSNEQ*RQPRSG
Trigger: TCCTGACCTGGGCTGCCTGCATTGCTCATTGGACCC...CCTTCCAGCCCTGGAGTAGCCTAGTCTGATAAGTCTCAACAATAAACCCTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp GCTCACTTAACAGGATCTCTGCCCTTACAATCCACACACGTGGTTGTGCACACATCAGGTCCTGGGGGATaGAGACCAATGAGAACCACC +
Preference number: 4 (lower is better)
Translates to: AHLTGSLPLQSTHVVVHTSGPGG*RPMRTT
Trigger: GGTGGTTCTCATTGGTCTCCATCCCCCAGGACCTGA...TGTGTGCACAACCACGTGTGTGGATTGTAAGGGCAGAGATCCTGTTAAGTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp GCTCACTTAACAGGATCTCTGCCCTTACAATCCACACACGTGGTTGTGCACACACAGAGGTCACAGTTCTaGCGTTGTCGAAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: AHLTGSLPLQSTHVVVHTQRSQF*RCRSHR
Trigger: CCTGTGACTTCGACAACGGCAGAACTGTGACCTCTG...TGTGTGCACAACCACGTGTGTGGATTGTAAGGGCAGAGATCCTGTTAAGTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp CTGGGTTATCCTTTAAGCTTCCTGGATCCCTGTGTGGCAACTACGGCTCTCATTAGCCTTCCCCAACCCTaGTTCTCTTCTGAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LGYPLSFLDPCVATTALISLPQP*FSSELS
Trigger: TGAGAGCTCAGAAGAGAAGCAGGGTTGGGGAAGGCT...AATGAGAGCCGTAGTTGCCACACAGGGATCCAGGAAGCTTAAAGGATAACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp GCTCACTTAACAGGATCTCTGCCCTTACAATCCACACACGTGGTTGTGCACACAAGCTGGGTGAGCCAATaGTGCACAGAGGATGGTAGA +
Preference number: 4 (lower is better)
Translates to: AHLTGSLPLQSTHVVVHTSWVSQ*CTEDGR
Trigger: TCTACCATCCTCTGTGCAGCATTGGCTCACCCAGCT...TGTGTGCACAACCACGTGTGTGGATTGTAAGGGCAGAGATCCTGTTAAGTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp AAAAAGGAACGTGAAGAATCCTCTCGCCCCCACAGGTCTCACTCCAGGCTCAGCCGCATAACACTGTATTaGGCATACAGTAGGTGCCTA +
Preference number: 4 (lower is better)
Translates to: KKEREESSRPHRSHSRLSRITLY*AYSRCL
Trigger: TAGGCACCTACTGTATGCCCAATACAGTGTTATGCG...GCTGAGCCTGGAGTGAGACCTGTGGGGGCGAGAGGATTCTTCACGTTCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR TCA 90 bp TCAGGGTTTATTGTTGAGACTTATCAGACTAGGCTACTCCAGGGCTGGAAGGTCTGCATTCTCCACTTCTaGCGAGGCCAAGATTCCCCA +
Preference number: 4 (lower is better)
Translates to: SGFIVETYQTRLLQGWKVCILHF*RGQDSP
Trigger: TGGGGAATCTTGGCCTCGTCAGAAGTGGAGAATGCA...GACCTTCCAGCCCTGGAGTAGCCTAGTCTGATAAGTCTCAACAATAAACCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp AGTCAGGGTTTATTGTTGAGACTTATCAGACTAGGCTACTCCAGGGCTGGAAGGAGATGCCCCAACTACTaGTGCTCTGCTGGTATGGCT +
Preference number: 4 (lower is better)
Translates to: SQGLLLRLIRLGYSRAGRRCPNY*CSAGMA
Trigger: AGCCATACCAGCAGAGCAGCAGTAGTTGGGGCATCT...CCTTCCAGCCCTGGAGTAGCCTAGTCTGATAAGTCTCAACAATAAACCCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp CTGTTAAGATTGTTTTCTGGGTTATCCTTTAAGCTTCCTGGATCCCTGTGTGGCCTCTGCTGGTATGGCTaGACTTGCAGAGACCCTCCC +
Preference number: 4 (lower is better)
Translates to: LLRLFSGLSFKLPGSLCGLCWYG*TCRDPP
Trigger: GGGAGGGTCTCTGCAAGTCCAGCCATACCAGCAGAG...GCCACACAGGGATCCAGGAAGCTTAAAGGATAACCCAGAAAACAATCTTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp ACACCACCAGAAGGCACCAAACCTGGGTGTCTCAGTAGAAAGAGGGAAGTTGCCATCATCATTTTAATCTaGGACAGGGAAGTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: TPPEGTKPGCLSRKREVAIIILI*DREVPQ
Trigger: CTGGGGGACTTCCCTGTCCCAGATTAAAATGATGAT...GGCAACTTCCCTCTTTCTACTGAGACACCCAGGTTTGGTGCCTTCTGGTGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR TCA 90 bp CGCTCCCAGCGATGCTCAATCACTAGCCCATTACATATAAGCCCGGATTATTCATTCCAAAAAGGAACGTaGAGAATCCTCTCGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RSQRCSITSPLHISPDYSFQKGT*RILSPP
Trigger: TGGGGGCGAGAGGATTCTTCACGTTCCTTTTTGGAA...TGAATAATCCGGGCTTATATGTAATGGGCTAGTGATTGAGCATCGCTGGGAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp TATCCTGCTCATCTCCTCCATAGAGTTTGCACACTCTCTTCTTTTCTGGAGTTACGTCGGAAGGTCCGTTaGGCACCACATAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: YPAHLLHRVCTLSSFLELRRKVR*APHRGC
Trigger: ACAGCCTCTATGTGGTGCGCAACGGACCTTCCGACG...TAACTCCAGAAAAGAAGAGAGTGTGCAAACTCTATGGAGGAGATGAGCAGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp AGTCAGGGTTTATTGTTGAGACTTATCAGACTAGGCTACTCCAGGGCTGGAAGGAGCTCAGTCATTATCTaGTGCAAGCTGGCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SQGLLLRLIRLGYSRAGRSSVII*CKLAQS
Trigger: AGACTGGGCCAGCTTGCAGCAGATAATGACTGAGCT...CCTTCCAGCCCTGGAGTAGCCTAGTCTGATAAGTCTCAACAATAAACCCTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp ACAGAGGTCAGCACTAGGTTCCTAACTAGTGGCCTCTGTAGCCTGGGTTCTTTCCCACACACGTGGTTGTaGACACACAATGATGTTACA +
Preference number: 4 (lower is better)
Translates to: TEVSTRFLTSGLCSLGSFPHTWL*THNDVT
Trigger: TGTAACATCATTGTGTGTGCACAACCACGTGTGTGG...GAAAGAACCCAGGCTACAGAGGCCACTAGTTAGGAACCTAGTGCTGACCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp AGTCAGGGTTTATTGTTGAGACTTATCAGACTAGGCTACTCCAGGGCTGGAAGGGTGGCCTCTGTAGCCTaGGTTCTTTCAAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: SQGLLLRLIRLGYSRAGRVASVA*VLSRHH
Trigger: ATGATGCCTTGAAAGAACCCAGGCTACAGAGGCCAC...CCTTCCAGCCCTGGAGTAGCCTAGTCTGATAAGTCTCAACAATAAACCCTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp CGCTCCCAGCGATGCTCAATCACTAGCCCATTACATATAAGCCCGGATTATTCATGGGCATACAGTAGGTaGCTAATTCTTGCCTACTAC +
Preference number: 4 (lower is better)
Translates to: RSQRCSITSPLHISPDYSWAYSR*LILAYY
Trigger: GTAGTAGGCAAGAATTAGGCACCTACTGTATGCCCA...TGAATAATCCGGGCTTATATGTAATGGGCTAGTGATTGAGCATCGCTGGGAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp GCTCACTTAACAGGATCTCTGCCCTTACAATCCACACACGTGGTTGTGCACACACTCCTCCATAGAGTTTaGACACTCTCTTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: AHLTGSLPLQSTHVVVHTLLHRV*TLSSFL
Trigger: CAGAAAAGAAGAGAGTGTGCAAACTCTATGGAGGAG...TGTGTGCACAACCACGTGTGTGGATTGTAAGGGCAGAGATCCTGTTAAGTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp CTGTTAAGATTGTTTTCTGGGTTATCCTTTAAGCTTCCTGGATCCCTGTGTGGCTCCTGGATCCCTGTGTaGCAACTACGGCTCTCATTA +
Preference number: 4 (lower is better)
Translates to: LLRLFSGLSFKLPGSLCGSWIPV*QLRLSL
Trigger: TAATGAGAGCCGTAGTTGCCACACAGGGATCCAGGA...GCCACACAGGGATCCAGGAAGCTTAAAGGATAACCCAGAAAACAATCTTAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp TTGAGGGCATCATCACTGCTCCCTGAGCTTCTTGAACATGTCCACACCACCAGATTGCCTTCAACTCTGTaGATCAAGTTGTGTGTAAAC +
Preference number: 4 (lower is better)
Translates to: LRASSLLPELLEHVHTTRLPSTL*IKLCVN
Trigger: GTTTACACACAACTTGATCCACAGAGTTGAAGGCAA...TCTGGTGGTGTGGACATGTTCAAGAAGCTCAGGGAGCAGTGATGATGCCCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CCA 90 bp GCTCACTTAACAGGATCTCTGCCCTTACAATCCACACACGTGGTTGTGCACACATACAATCCACACACGTaGTTGTGCACACACAATGAT +
Preference number: 4 (lower is better)
Translates to: AHLTGSLPLQSTHVVVHTYNPHT*LCTHND
Trigger: ATCATTGTGTGTGCACAACCACGTGTGTGGATTGTA...TGTGTGCACAACCACGTGTGTGGATTGTAAGGGCAGAGATCCTGTTAAGTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR GCA 90 bp TATCCTGCTCATCTCCTCCATAGAGTTTGCACACTCTCTTCTTTTCTGGAGTTATTCCTATTTTCCCTTTaGCCTGATTTCTTCAGCACT +
Preference number: 4 (lower is better)
Translates to: YPAHLLHRVCTLSSFLELFLFSL*PDFFST
Trigger: AGTGCTGAAGAAATCAGGGCAAAGGGAAAATAGGAA...TAACTCCAGAAAAGAAGAGAGTGTGCAAACTCTATGGAGGAGATGAGCAGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 90 bp GTGTCGGCCGGCCGCCACAGGCACACGAAGAGACGGCCACAAGCCTaGGCGCAGGGCACGCCGGCGGCCGGCTGCGGCAGGTCGGCCACG +
Preference number: 5 (lower is better)
Translates to: VSAGRHRHTKRRPQA*AQGTPAAGCGRSAT
Trigger: CGTGGCCGACCTGCCGCAGCCGGCCGCCGGCGTGCCCTGCGCCCAGGCTTGTGGCCGTCTCTTCGTGTGCCTGTGGCGGCCGGCCGACAC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 90 bp GAGCTGGCCGCCCACCCACACCTGCACCAGGGTCTGTGGACCCCGTaGCATGGCGAGCTGGCCGGGCGGAGGCTGCCGCTGGGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: ELAAHPHLHQGLWTP*HGELAGRRLPLGPW
Trigger: CCAAGGCCCCAGCGGCAGCCTCCGCCCGGCCAGCTCGCCATGGCACGGGGTCCACAGACCCTGGTGCAGGTGTGGGTGGGCGGCCAGCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 90 bp AAGAGACGGCCACAAGCCTGGGCGCAGGGCACGCCGGCGGCCGGCTaGGGCAGGTCGGCCACGAAACTCCAGCAGCCCGCGGCTGGGTCG +
Preference number: 5 (lower is better)
Translates to: KRRPQAWAQGTPAAG*GRSATKLQQPAAGS
Trigger: CGACCCAGCCGCGGGCTGCTGGAGTTTCGTGGCCGACCTGCCGCAGCCGGCCGCCGGCGTGCCCTGCGCCCAGGCTTGTGGCCGTCTCTT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 90 bp CGGACGCCGCAGCTCGGCCACTGGCAGCCACGCGTCGGTCCGCACTaGGTACTCCACCACGGCGGTGGTGTCGGCCGGCCGCCACAGGCA +
Preference number: 5 (lower is better)
Translates to: RTPQLGHWQPRVGPH*VLHHGGGVGRPPQA
Trigger: TGCCTGTGGCGGCCGGCCGACACCACCGCCGTGGTGGAGTACGCAGTGCGGACCGACGCGTGGCTGCCAGTGGCCGAGCTGCGGCGTCCG
76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 90 bp GCCGCCAGCTCGCGCTCGCCGTCGCAGATGAAGAGCGCGGCACTGTaGAACACGTCGCGCAGGCCGAAGGCGGCGGCCGCGTCGCACAGC +
Preference number: 5 (lower is better)
Translates to: AASSRSPSQMKSAAL*NTSRRPKAAAASHS
Trigger: GCTGTGCGACGCGGCCGCCGCCTTCGGCCTGCGCGACGTGTTCCACAGTGCCGCGCTCTTCATCTGCGACGGCGAGCGCGAGCTGGCGGC
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 90 bp GGCTTGGAAGAGCTGGCCGCCCACCCACACCTGCACCAGGGTCTGTaGACCCCGTGCCATGGCGAGCTGGCCGGGCGGAGGCTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: GLEELAAHPHLHQGL*TPCHGELAGRRLPL
Trigger: CAGCGGCAGCCTCCGCCCGGCCAGCTCGCCATGGCACGGGGTCCACAGACCCTGGTGCAGGTGTGGGTGGGCGGCCAGCTCTTCCAAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS TCA 90 bp CAGGCAGCGCCAGTTCGGCCGCCAGCTCGCGCTCGCCGTCGCAGATaGAGAGCGCGGCACTGTGGAACACGTCGCGCAGGCCGAAGGCGG +
Preference number: 5 (lower is better)
Translates to: QAAPVRPPARARRRR*RARHCGTRRAGRRR
Trigger: CCGCCTTCGGCCTGCGCGACGTGTTCCACAGTGCCGCGCTCTTCATCTGCGACGGCGAGCGCGAGCTGGCGGCCGAACTGGCGCTGCCTG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 90 bp CCAGCGTGCGCCACGCGTCCTCTTCCTCGTCCAGGTAACACAGCGTaGGCGAGGCGTCCTCCAGGAAGCCGGGCGCGGGCGTGTGCGTGC +
Preference number: 5 (lower is better)
Translates to: PACATRPLPRPGNTA*ARRPPGSRARACAC
Trigger: GCACGCACACGCCCGCGCCCGGCTTCCTGGAGGACGCCTCGCGCACGCTGTGTTACCTGGACGAGGAAGAGGACGCGTGGCGCACGCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 90 bp ACCCACACCTGCACCAGGGTCTGTGGACCCCGTGCCATGGCGAGCTaGCCGGGCGGAGGCTGCCGCTGGGGCCTTGGGTTAGCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: THTCTRVCGPRAMAS*PGGGCRWGLGLASH
Trigger: GTGGCTGGCTAACCCAAGGCCCCAGCGGCAGCCTCCGCCCGGCCAGCTCGCCATGGCACGGGGTCCACAGACCCTGGTGCAGGTGTGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 90 bp CGTCGAAGCCGGCCAGCGCTGTGTCATAGCGCGGCTGGTGCGGGCTaGGGAACTCGTGCCACGTGCCGCCGTCGGGGTCGTAGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: RRSRPALCHSAAGAG*GTRATCRRRGRSRS
Trigger: GCTTCTGCTACGACCCCGACGGCGGCACGTGGCACGAGTTCCCCAGCCCGCACCAGCCGCGCTATGACACAGCGCTGGCCGGCTTCGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 90 bp CTGGCAGCCACGCGTCGGTCCGCACTGCGTACTCCACCACGGCGGTaGTGTCGGCCGGCCGCCACAGGCACACGAAGAGACGGCCACAAG +
Preference number: 5 (lower is better)
Translates to: LAATRRSALRTPPRR*CRPAATGTRRDGHK
Trigger: CTTGTGGCCGTCTCTTCGTGTGCCTGTGGCGGCCGGCCGACACCACCGCCGTGGTGGAGTACGCAGTGCGGACCGACGCGTGGCTGCCAG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 90 bp AAGCCACAGTGCTCCACCAGCAGGGCGCGGTCGGCTTGGAAGAGCTaGCCGCCCACCCACACCTGCACCAGGGTCTGTGGACCCCGTGCC +
Preference number: 5 (lower is better)
Translates to: KPQCSTSRARSAWKS*PPTHTCTRVCGPRA
Trigger: GGCACGGGGTCCACAGACCCTGGTGCAGGTGTGGGTGGGCGGCCAGCTCTTCCAAGCCGACCGCGCCCTGCTGGTGGAGCACTGTGGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 90 bp GGCCGGCTGCGGCAGGTCGGCCACGAAACTCCAGCAGCCCGCGGCTaGGTCGTAGCGCTCCACGGAGCTGATGGGCGTCCTCTGGAATTC +
Preference number: 5 (lower is better)
Translates to: GRLRQVGHETPAARG*VVALHGADGRPLEF
Trigger: GAATTCCAGAGGACGCCCATCAGCTCCGTGGAGCGCTACGACCCAGCCGCGGGCTGCTGGAGTTTCGTGGCCGACCTGCCGCAGCCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 90 bp CACCATGCAGTGGCCATAGCTCTGCGGACGCCGCAGCTCGGCCACTaGCAGCCACGCGTCGGTCCGCACTGCGTACTCCACCACGGCGGT +
Preference number: 5 (lower is better)
Translates to: HHAVAIALRTPQLGH*QPRVGPHCVLHHGG
Trigger: ACCGCCGTGGTGGAGTACGCAGTGCGGACCGACGCGTGGCTGCCAGTGGCCGAGCTGCGGCGTCCGCAGAGCTATGGCCACTGCATGGTG
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 90 bp CCGCGCACCACGGCCGTGAAGAGCGCTCCCTTGCTGTTGACGAACTaGCCGGGCAGCGCCGTCCACTGGCCCGTGGCCAGGTTGAGACAG +
Preference number: 5 (lower is better)
Translates to: PRTTAVKSAPLLLTN*PGSAVHWPVARLRQ
Trigger: CTGTCTCAACCTGGCCACGGGCCAGTGGACGGCGCTGCCCGGCCAGTTCGTCAACAGCAAGGGAGCGCTCTTCACGGCCGTGGTGCGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS TCA 90 bp CGAAGGCGGCGGCCGCGTCGCACAGCAATGCGCAGTTGTCCGACGTaGGGTTGTGCTCCAGAAAGCGAGCCAGCGCCGGCGCCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: RRRRPRRTAMRSCPT*GCAPESEPAPAPGG
Trigger: TCCTCCAGGCGCCGGCGCTGGCTCGCTTTCTGGAGCACAACCTCACGTCGGACAACTGCGCATTGCTGTGCGACGCGGCCGCCGCCTTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS TCA 90 bp CGAAACTCCAGCAGCCCGCGGCTGGGTCGTAGCGCTCCACGGAGCTaGTGGGCGTCCTCTGGAATTCGCCGCCGATGGCGTAGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: RNSSSPRLGRSAPRS*WASSGIRRRWRRGG
Trigger: GCCGCCTCTACGCCATCGGCGGCGAATTCCAGAGGACGCCCATCAGCTCCGTGGAGCGCTACGACCCAGCCGCGGGCTGCTGGAGTTTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 90 bp CGCTCAGAACGCCCAGGCGCACCTCTGCTGCGCGGGTCTCCCGCATaGCGGAGCGGAAGAGGCCTCGGAAGAAGCCACAGTGCTCCACCA +
Preference number: 5 (lower is better)
Translates to: RSERPGAPLLRGSPA*RSGRGLGRSHSAPP
Trigger: TGGTGGAGCACTGTGGCTTCTTCCGAGGCCTCTTCCGCTCCGGCATGCGGGAGACCCGCGCAGCAGAGGTGCGCCTGGGCGTTCTGAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 90 bp TGTAAAGCTTGTTGCCCAGCGTGGCCACCCCGGCCAGCAACGTGCTaGCCTCCAGGGGCAGCGCAGCCAGCGTGCGCCACGCGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: CKACCPAWPPRPATC*PPGAAQPACATRPL
Trigger: AAGAGGACGCGTGGCGCACGCTGGCTGCGCTGCCCCTGGAGGCCAGCACGTTGCTGGCCGGGGTGGCCACGCTGGGCAACAAGCTTTACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 90 bp CTGTGTCATAGCGCGGCTGGTGCGGGCTGGGGAACTCGTGCCACGTaGCGCCGTCGGGGTCGTAGCAGAAGCCCAGCTCTACCACCTCCT +
Preference number: 5 (lower is better)
Translates to: LCHSAAGAGWGTRAT*RRRGRSRSPALPPP
Trigger: AGGAGGTGGTAGAGCTGGGCTTCTGCTACGACCCCGACGGCGGCACGTGGCACGAGTTCCCCAGCCCGCACCAGCCGCGCTATGACACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 90 bp GTCACAGGCCCAGGAGCGCCAGGAGGCAGCCTTAGGAGAAAGGTCTaGAAGGAGCCGGGCCGCGGGAAGCCGGCTTTCTCCCTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: VTGPGAPGGSLRRKV*KEPGRGKPAFSLSS
Trigger: GCTGCTCAGGGAGAAAGCCGGCTTCCCGCGGCCCGGCTCCTTGCAGACCTTTCTCCTAAGGCTGCCTCCTGGCGCTCCTGGGCCTGTGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 90 bp CCTCGGAAGAAGCCACAGTGCTCCACCAGCAGGGCGCGGTCGGCTTaGAAGAGCTGGCCGCCCACCCACACCTGCACCAGGGTCTGTGGA +
Preference number: 5 (lower is better)
Translates to: PRKKPQCSTSRARSA*KSWPPTHTCTRVCG
Trigger: TCCACAGACCCTGGTGCAGGTGTGGGTGGGCGGCCAGCTCTTCCAAGCCGACCGCGCCCTGCTGGTGGAGCACTGTGGCTTCTTCCGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 90 bp GAACACGTCGCGCAGGCCGAAGGCGGCGGCCGCGTCGCACAGCAATaGGCAGTTGTCCGACGTGAGGTTGTGCTCCAGAAAGCGAGCCAG +
Preference number: 5 (lower is better)
Translates to: EHVAQAEGGGRVAQQ*AVVRREVVLQKASQ
Trigger: CTGGCTCGCTTTCTGGAGCACAACCTCACGTCGGACAACTGCGCATTGCTGTGCGACGCGGCCGCCGCCTTCGGCCTGCGCGACGTGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 90 bp AAGGTCCGTTGCGCACCACATAGAGGCTGTCGCGGTGGGCCACCATaGAGTGGCCATAGCTCTGCGGACGCCGCAGCTCGGCCACTGGCA +
Preference number: 5 (lower is better)
Translates to: KVRCAPHRGCRGGPP*SGHSSADAAARPLA
Trigger: TGCCAGTGGCCGAGCTGCGGCGTCCGCAGAGCTATGGCCACTGCATGGTGGCCCACCGCGACAGCCTCTATGTGGTGCGCAACGGACCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 90 bp AGCGCTCCCTTGCTGTTGACGAACTGGCCGGGCAGCGCCGTCCACTaGCCCGTGGCCAGGTTGAGACAGTCGATGGCGCAGTGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SAPLLLTNWPGSAVH*PVARLRQSMAQCRK
Trigger: CTTCCTGCACTGCGCCATCGACTGTCTCAACCTGGCCACGGGCCAGTGGACGGCGCTGCCCGGCCAGTTCGTCAACAGCAAGGGAGCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CAA 90 bp GGCCGGCCTCACACACTCAGCCATAGCTCAGGGAGGAGTCGCGGCGTCTCCTCCGTAGAAAGAGGGAAGTaGCCAGCTACTTCTAAGGCC +
Preference number: 5 (lower is better)
Translates to: GRPHTLSHSSGRSRGVSSVERGK*PATSKA
Trigger: GGCCTTAGAAGTAGCTGGCAACTTCCCTCTTTCTAC...GGAGGAGACGCCGCGACTCCTCCCTGAGCTATGGCTGAGTGTGTGAGGCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CAA 90 bp ACAGAGGTCAGCACTAGGTTCCTAACTAGTGGCCTCTGTAGCCTGGGTTCTTTCAGCTCTACCACCTCCTaGCTGGCGCCGCGCACGCCC +
Preference number: 5 (lower is better)
Translates to: TEVSTRFLTSGLCSLGSFSSTTS*LAPRTP
Trigger: GGGCGTGCGCGGCGCCAGCAAGGAGGTGGTAGAGCT...GAAAGAACCCAGGCTACAGAGGCCACTAGTTAGGAACCTAGTGCTGACCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CAA 90 bp GCTCTCAGCCTCCATGGTCTAAGCCTCCCCTTTCAGCAGCTAATGGTATCCTGCTGGCCCGTGGCCAGGTaGAGACAGTCGATGGCGCAG +
Preference number: 5 (lower is better)
Translates to: ALSLHGLSLPFQQLMVSCWPVAR*RQSMAQ
Trigger: CTGCGCCATCGACTGTCTCAACCTGGCCACGGGCCA...GCAGGATACCATTAGCTGCTGAAAGGGGAGGCTTAGACCATGGAGGCTGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CAA 90 bp GCTGACACTGCATTCTCCACTTCTGACGAGGCCAAGATTCCCCATGGGCCTCAGTTGTCCGACGTGAGGTaGTGCTCCAGAAAGCGAGCC +
Preference number: 5 (lower is better)
Translates to: ADTAFSTSDEAKIPHGPQLSDVR*CSRKRA
Trigger: GGCTCGCTTTCTGGAGCACAACCTCACGTCGGACAA...CTGAGGCCCATGGGGAATCTTGGCCTCGTCAGAAGTGGAGAATGCAGTGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CAA 90 bp GCTCACTTAACAGGATCTCTGCCCTTACAATCCACACACGTGGTTGTGCACACAAGCGCTCCCTTGCTGTaGACGAACTGGCCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: AHLTGSLPLQSTHVVVHTSAPLL*TNWPGS
Trigger: GCTGCCCGGCCAGTTCGTCAACAGCAAGGGAGCGCT...TGTGTGCACAACCACGTGTGTGGATTGTAAGGGCAGAGATCCTGTTAAGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CAA 90 bp GGCCTCAGGTCCTGGGGGATGGAGACCAATGAGAACCACCCAGAGAAGTCTTCCCAGAGCCCAAGTAATTaGAGGGCATCATCACTGCTC +
Preference number: 5 (lower is better)
Translates to: GLRSWGMETNENHPEKSSQSPSN*RASSLL
Trigger: GAGCAGTGATGATGCCCTCAAATTACTTGGGCTCTG...GGAAGACTTCTCTGGGTGGTTCTCATTGGTCTCCATCCCCCAGGACCTGAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CAA 90 bp GGCCGGCCTCACACACTCAGCCATAGCTCAGGGAGGAGTCGCGGCGTCTCCTCCACTCTGTGGATCAAGTaGTGTGTAAACCTTTTTGTT +
Preference number: 5 (lower is better)
Translates to: GRPHTLSHSSGRSRGVSSTLWIK*CVNLFV
Trigger: AACAAAAAGGTTTACACACAACTTGATCCACAGAGT...GGAGGAGACGCCGCGACTCCTCCCTGAGCTATGGCTGAGTGTGTGAGGCCGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CAA 90 bp TTGAGGGCATCATCACTGCTCCCTGAGCTTCTTGAACATGTCCACACCACCAGACACAGCAATGCGCAGTaGTCCGACGTGAGGTTGTGC +
Preference number: 5 (lower is better)
Translates to: LRASSLLPELLEHVHTTRHSNAQ*SDVRLC
Trigger: GCACAACCTCACGTCGGACAACTGCGCATTGCTGTG...TCTGGTGGTGTGGACATGTTCAAGAAGCTCAGGGAGCAGTGATGATGCCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CAA 90 bp AGTCAGGGTTTATTGTTGAGACTTATCAGACTAGGCTACTCCAGGGCTGGAAGGGTGAAGAGCGCTCCCTaGCTGTTGACGAACTGGCCG +
Preference number: 5 (lower is better)
Translates to: SQGLLLRLIRLGYSRAGRVKSAP*LLTNWP
Trigger: CGGCCAGTTCGTCAACAGCAAGGGAGCGCTCTTCAC...CCTTCCAGCCCTGGAGTAGCCTAGTCTGATAAGTCTCAACAATAAACCCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CAA 90 bp TCAGGGTTTATTGTTGAGACTTATCAGACTAGGCTACTCCAGGGCTGGAAGGTCGTCACAGTTCTGCCGTaGTCGAAGTCACAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: SGFIVETYQTRLLQGWKVVTVLP*SKSQAQ
Trigger: CTGGGCCTGTGACTTCGACAACGGCAGAACTGTGAC...GACCTTCCAGCCCTGGAGTAGCCTAGTCTGATAAGTCTCAACAATAAACCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CAA 90 bp CTGGGTTATCCTTTAAGCTTCCTGGATCCCTGTGTGGCAACTACGGCTCTCATTCAGCATTCTCCAGGGTaGGGACATAGGCCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: LGYPLSFLDPCVATTALIQHSPG*GHRPGE
Trigger: TTCTCCTGGCCTATGTCCCAACCCTGGAGAATGCTG...AATGAGAGCCGTAGTTGCCACACAGGGATCCAGGAAGCTTAAAGGATAACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CAA 90 bp GCTCACTTAACAGGATCTCTGCCCTTACAATCCACACACGTGGTTGTGCACACAAAGATGAGGCAGGATTaGGCTCATACCTCAACTGAC +
Preference number: 5 (lower is better)
Translates to: AHLTGSLPLQSTHVVVHTKMRQD*AHTSTD
Trigger: GTCAGTTGAGGTATGAGCCAAATCCTGCCTCATCTT...TGTGTGCACAACCACGTGTGTGGATTGTAAGGGCAGAGATCCTGTTAAGTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS-3UTR CAA 90 bp GCTCACTTAACAGGATCTCTGCCCTTACAATCCACACACGTGGTTGTGCACACAAGTCAGGGTTTATTGTaGAGACTTATCAGACTAGGC +
Preference number: 5 (lower is better)
Translates to: AHLTGSLPLQSTHVVVHTSQGLL*RLIRLG
Trigger: GCCTAGTCTGATAAGTCTCAACAATAAACCCTGACT...TGTGTGCACAACCACGTGTGTGGATTGTAAGGGCAGAGATCCTGTTAAGTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 72 bp GCGCGGGCGTGTGCGTGCTCACGGCCGCGTAGCTGCTaGGCCGCAGGGCCGCCACGTAGGCGCGGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: ARACACSRPRSC*AAGPPRRRGPQ
Trigger: CTGAGGCCCGCGCCTACGTGGCGGCCCTGCGGCCCAGCAGCTACGCGGCCGTGAGCACGCACACGCCCGCGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 72 bp AGGCGTCCTCCAGGAAGCCGGGCGCGGGCGTGTGCGTaGTCACGGCCGCGTAGCTGCTGGGCCGCAGGGCCG +
Preference number: 6 (lower is better)
Translates to: RRPPGSRARACA*SRPRSCWAAGP
Trigger: CGGCCCTGCGGCCCAGCAGCTACGCGGCCGTGAGCACGCACACGCCCGCGCCCGGCTTCCTGGAGGACGCCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 72 bp CCACAAGCCTGGGCGCAGGGCACGCCGGCGGCCGGCTaGGGCAGGTCGGCCACGAAACTCCAGCAGCCCGCG +
Preference number: 6 (lower is better)
Translates to: PQAWAQGTPAAG*GRSATKLQQPA
Trigger: CGCGGGCTGCTGGAGTTTCGTGGCCGACCTGCCGCAGCCGGCCGCCGGCGTGCCCTGCGCCCAGGCTTGTGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 72 bp CCAGCGCCGGCCGGTCGCCGCGCAGCACCTGCAGCGTaGCGCGGAAACCTCCCGCGCTCAGAACGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: PAPAGRRAAPAA*RGNLPRSERPG
Trigger: GCCTGGGCGTTCTGAGCGCGGGAGGTTTCCGCGCCACGCTGCAGGTGCTGCGCGGCGACCGGCCGGCGCTGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 72 bp CCCACACCTGCACCAGGGTCTGTGGACCCCGTGCCATaGCGAGCTGGCCGGGCGGAGGCTGCCGCTGGGGCC +
Preference number: 6 (lower is better)
Translates to: PTPAPGSVDPVP*RAGRAEAAAGA
Trigger: GGCCCCAGCGGCAGCCTCCGCCCGGCCAGCTCGCCATGGCACGGGGTCCACAGACCCTGGTGCAGGTGTGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 72 bp GCCCACCCACACCTGCACCAGGGTCTGTGGACCCCGTaGCATGGCGAGCTGGCCGGGCGGAGGCTGCCGCTG +
Preference number: 6 (lower is better)
Translates to: AHPHLHQGLWTP*HGELAGRRLPL
Trigger: CAGCGGCAGCCTCCGCCCGGCCAGCTCGCCATGGCACGGGGTCCACAGACCCTGGTGCAGGTGTGGGTGGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 72 bp CAGCTCGGCCACTGGCAGCCACGCGTCGGTCCGCACTaGGTACTCCACCACGGCGGTGGTGTCGGCCGGCCG +
Preference number: 6 (lower is better)
Translates to: QLGHWQPRVGPH*VLHHGGGVGRP
Trigger: CGGCCGGCCGACACCACCGCCGTGGTGGAGTACGCAGTGCGGACCGACGCGTGGCTGCCAGTGGCCGAGCTG
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 72 bp GAGCTGGCCGCCCACCCACACCTGCACCAGGGTCTGTaGACCCCGTGCCATGGCGAGCTGGCCGGGCGGAGG +
Preference number: 6 (lower is better)
Translates to: ELAAHPHLHQGL*TPCHGELAGRR
Trigger: CCTCCGCCCGGCCAGCTCGCCATGGCACGGGGTCCACAGACCCTGGTGCAGGTGTGGGTGGGCGGCCAGCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 72 bp TGTTGCCCAGCGTGGCCACCCCGGCCAGCAACGTGCTaGCCTCCAGGGGCAGCGCAGCCAGCGTGCGCCACG +
Preference number: 6 (lower is better)
Translates to: CCPAWPPRPATC*PPGAAQPACAT
Trigger: CGTGGCGCACGCTGGCTGCGCTGCCCCTGGAGGCCAGCACGTTGCTGGCCGGGGTGGCCACGCTGGGCAACA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 72 bp TCGCGCTCGCCGTCGCAGATGAAGAGCGCGGCACTGTaGAACACGTCGCGCAGGCCGAAGGCGGCGGCCGCG +
Preference number: 6 (lower is better)
Translates to: SRSPSQMKSAAL*NTSRRPKAAAA
Trigger: CGCGGCCGCCGCCTTCGGCCTGCGCGACGTGTTCCACAGTGCCGCGCTCTTCATCTGCGACGGCGAGCGCGA
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 72 bp CGGCCAGCGCTGTGTCATAGCGCGGCTGGTGCGGGCTaGGGAACTCGTGCCACGTGCCGCCGTCGGGGTCGT +
Preference number: 6 (lower is better)
Translates to: RPALCHSAAGAG*GTRATCRRRGR
Trigger: ACGACCCCGACGGCGGCACGTGGCACGAGTTCCCCAGCCCGCACCAGCCGCGCTATGACACAGCGCTGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS TCA 72 bp GCAAGGAGCCGGGCCGCGGGAAGCCGGCTTTCTCCCTaGGCAGCCGCCAGGTGCCGCCCTCGATGGCGTAGA +
Preference number: 6 (lower is better)
Translates to: ARSRAAGSRLSP*AAARCRPRWRR
Trigger: TCTACGCCATCGAGGGCGGCACCTGGCGGCTGCTCAGGGAGAAAGCCGGCTTCCCGCGGCCCGGCTCCTTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 72 bp GCCACGCGTCCTCTTCCTCGTCCAGGTAACACAGCGTaGGCGAGGCGTCCTCCAGGAAGCCGGGCGCGGGCG +
Preference number: 6 (lower is better)
Translates to: ATRPLPRPGNTA*ARRPPGSRARA
Trigger: CGCCCGCGCCCGGCTTCCTGGAGGACGCCTCGCGCACGCTGTGTTACCTGGACGAGGAAGAGGACGCGTGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 72 bp TGCACCAGGGTCTGTGGACCCCGTGCCATGGCGAGCTaGCCGGGCGGAGGCTGCCGCTGGGGCCTTGGGTTA +
Preference number: 6 (lower is better)
Translates to: CTRVCGPRAMAS*PGGGCRWGLGL
Trigger: TAACCCAAGGCCCCAGCGGCAGCCTCCGCCCGGCCAGCTCGCCATGGCACGGGGTCCACAGACCCTGGTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CAA 72 bp CCGCGCACCACGGCCGTGAAGAGCGCTCCCTTGCTGTaGACGAACTGGCCGGGCAGCGCCGTCCACTGGCCC +
Preference number: 6 (lower is better)
Translates to: PRTTAVKSAPLL*TNWPGSAVHWP
Trigger: GGGCCAGTGGACGGCGCTGCCCGGCCAGTTCGTCAACAGCAAGGGAGCGCTCTTCACGGCCGTGGTGCGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CAA 90 bp ACGGTGTCACCGCGCACCACGGCCGTGAAGAGCGCTCCCTTGCTGTaGACGAACTGGCCGGGCAGCGCCGTCCACTGGCCCGTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: TVSPRTTAVKSAPLL*TNWPGSAVHWPVAR
Trigger: CCTGGCCACGGGCCAGTGGACGGCGCTGCCCGGCCAGTTCGTCAACAGCAAGGGAGCGCTCTTCACGGCCGTGGTGCGCGGTGACACCGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS TCA 72 bp CCAGTTCGGCCGCCAGCTCGCGCTCGCCGTCGCAGATaGAGAGCGCGGCACTGTGGAACACGTCGCGCAGGC +
Preference number: 6 (lower is better)
Translates to: PVRPPARARRRR*RARHCGTRRAG
Trigger: GCCTGCGCGACGTGTTCCACAGTGCCGCGCTCTTCATCTGCGACGGCGAGCGCGAGCTGGCGGCCGAACTGG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS TCA 72 bp GGCCGGGCAGCGCCGTCCACTGGCCCGTGGCCAGGTTaGGACAGTCGATGGCGCAGTGCAGGAAGTCGTCGG +
Preference number: 6 (lower is better)
Translates to: GRAAPSTGPWPG*DSRWRSAGSRR
Trigger: CCGACGACTTCCTGCACTGCGCCATCGACTGTCTCAACCTGGCCACGGGCCAGTGGACGGCGCTGCCCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 72 bp CGGTCGGCTTGGAAGAGCTGGCCGCCCACCCACACCTaGACCAGGGTCTGTGGACCCCGTGCCATGGCGAGC +
Preference number: 6 (lower is better)
Translates to: RSAWKSWPPTHT*TRVCGPRAMAS
Trigger: GCTCGCCATGGCACGGGGTCCACAGACCCTGGTGCAGGTGTGGGTGGGCGGCCAGCTCTTCCAAGCCGACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 72 bp CGCCCAGGCGCACCTCTGCTGCGCGGGTCTCCCGCATaGCGGAGCGGAAGAGGCCTCGGAAGAAGCCACAGT +
Preference number: 6 (lower is better)
Translates to: RPGAPLLRGSPA*RSGRGLGRSHS
Trigger: ACTGTGGCTTCTTCCGAGGCCTCTTCCGCTCCGGCATGCGGGAGACCCGCGCAGCAGAGGTGCGCCTGGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 72 bp AGCGCGGCTGGTGCGGGCTGGGGAACTCGTGCCACGTaGCGCCGTCGGGGTCGTAGCAGAAGCCCAGCTCTA +
Preference number: 6 (lower is better)
Translates to: SAAGAGWGTRAT*RRRGRSRSPAL
Trigger: TAGAGCTGGGCTTCTGCTACGACCCCGACGGCGGCACGTGGCACGAGTTCCCCAGCCCGCACCAGCCGCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 72 bp CGGCAGGTCGGCCACGAAACTCCAGCAGCCCGCGGCTaGGTCGTAGCGCTCCACGGAGCTGATGGGCGTCCT +
Preference number: 6 (lower is better)
Translates to: RQVGHETPAARG*VVALHGADGRP
Trigger: AGGACGCCCATCAGCTCCGTGGAGCGCTACGACCCAGCCGCGGGCTGCTGGAGTTTCGTGGCCGACCTGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 72 bp ACGCGTCGGTCCGCACTGCGTACTCCACCACGGCGGTaGTGTCGGCCGGCCGCCACAGGCACACGAAGAGAC +
Preference number: 6 (lower is better)
Translates to: TRRSALRTPPRR*CRPAATGTRRD
Trigger: GTCTCTTCGTGTGCCTGTGGCGGCCGGCCGACACCACCGCCGTGGTGGAGTACGCAGTGCGGACCGACGCGT
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 72 bp GTGGCCATAGCTCTGCGGACGCCGCAGCTCGGCCACTaGCAGCCACGCGTCGGTCCGCACTGCGTACTCCAC +
Preference number: 6 (lower is better)
Translates to: VAIALRTPQLGH*QPRVGPHCVLH
Trigger: GTGGAGTACGCAGTGCGGACCGACGCGTGGCTGCCAGTGGCCGAGCTGCGGCGTCCGCAGAGCTATGGCCAC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 72 bp ACGGCCGTGAAGAGCGCTCCCTTGCTGTTGACGAACTaGCCGGGCAGCGCCGTCCACTGGCCCGTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: TAVKSAPLLLTN*PGSAVHWPVAR
Trigger: CCTGGCCACGGGCCAGTGGACGGCGCTGCCCGGCCAGTTCGTCAACAGCAAGGGAGCGCTCTTCACGGCCGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CAA 90 bp TCGCGCAGGCCGAAGGCGGCGGCCGCGTCGCACAGCAATGCGCAGTaGTCCGACGTGAGGTTGTGCTCCAGAAAGCGAGCCAGCGCCGGC +
Preference number: 6 (lower is better)
Translates to: SRRPKAAAASHSNAQ*SDVRLCSRKRASAG
Trigger: GCCGGCGCTGGCTCGCTTTCTGGAGCACAACCTCACGTCGGACAACTGCGCATTGCTGTGCGACGCGGCCGCCGCCTTCGGCCTGCGCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CAA 90 bp GCCTCGGAAGAAGCCACAGTGCTCCACCAGCAGGGCGCGGTCGGCTaGGAAGAGCTGGCCGCCCACCCACACCTGCACCAGGGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: ASEEATVLHQQGAVG*EELAAHPHLHQGLW
Trigger: CCACAGACCCTGGTGCAGGTGTGGGTGGGCGGCCAGCTCTTCCAAGCCGACCGCGCCCTGCTGGTGGAGCACTGTGGCTTCTTCCGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS TCA 72 bp AGCAGCCCGCGGCTGGGTCGTAGCGCTCCACGGAGCTaGTGGGCGTCCTCTGGAATTCGCCGCCGATGGCGT +
Preference number: 6 (lower is better)
Translates to: SSPRLGRSAPRS*WASSGIRRRWR
Trigger: ACGCCATCGGCGGCGAATTCCAGAGGACGCCCATCAGCTCCGTGGAGCGCTACGACCCAGCCGCGGGCTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 72 bp TGCTCCACCAGCAGGGCGCGGTCGGCTTGGAAGAGCTaGCCGCCCACCCACACCTGCACCAGGGTCTGTGGA +
Preference number: 6 (lower is better)
Translates to: CSTSRARSAWKS*PPTHTCTRVCG
Trigger: TCCACAGACCCTGGTGCAGGTGTGGGTGGGCGGCCAGCTCTTCCAAGCCGACCGCGCCCTGCTGGTGGAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 72 bp AAGCCACAGTGCTCCACCAGCAGGGCGCGGTCGGCTTaGAAGAGCTGGCCGCCCACCCACACCTGCACCAGG +
Preference number: 6 (lower is better)
Translates to: KPQCSTSRARSA*KSWPPTHTCTR
Trigger: CCTGGTGCAGGTGTGGGTGGGCGGCCAGCTCTTCCAAGCCGACCGCGCCCTGCTGGTGGAGCACTGTGGCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CAA 72 bp TGGCCGGGCAGCGCCGTCCACTGGCCCGTGGCCAGGTaGAGACAGTCGATGGCGCAGTGCAGGAAGTCGTCG +
Preference number: 6 (lower is better)
Translates to: WPGSAVHWPVAR*RQSMAQCRKSS
Trigger: CGACGACTTCCTGCACTGCGCCATCGACTGTCTCAACCTGGCCACGGGCCAGTGGACGGCGCTGCCCGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CAA 72 bp GTGTCACCGCGCACCACGGCCGTGAAGAGCGCTCCCTaGCTGTTGACGAACTGGCCGGGCAGCGCCGTCCAC +
Preference number: 6 (lower is better)
Translates to: VSPRTTAVKSAP*LLTNWPGSAVH
Trigger: GTGGACGGCGCTGCCCGGCCAGTTCGTCAACAGCAAGGGAGCGCTCTTCACGGCCGTGGTGCGCGGTGACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS TCA 72 bp CGGCCGCGTCGCACAGCAATGCGCAGTTGTCCGACGTaGGGTTGTGCTCCAGAAAGCGAGCCAGCGCCGGCG +
Preference number: 6 (lower is better)
Translates to: RPRRTAMRSCPT*GCAPESEPAPA
Trigger: CGCCGGCGCTGGCTCGCTTTCTGGAGCACAACCTCACGTCGGACAACTGCGCATTGCTGTGCGACGCGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 72 bp TGCGCACCACATAGAGGCTGTCGCGGTGGGCCACCATaGAGTGGCCATAGCTCTGCGGACGCCGCAGCTCGG +
Preference number: 6 (lower is better)
Translates to: CAPHRGCRGGPP*SGHSSADAAAR
Trigger: CCGAGCTGCGGCGTCCGCAGAGCTATGGCCACTGCATGGTGGCCCACCGCGACAGCCTCTATGTGGTGCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 72 bp CCAGGAGCGCCAGGAGGCAGCCTTAGGAGAAAGGTCTaGAAGGAGCCGGGCCGCGGGAAGCCGGCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: PGAPGGSLRRKV*KEPGRGKPAFS
Trigger: GGAGAAAGCCGGCTTCCCGCGGCCCGGCTCCTTGCAGACCTTTCTCCTAAGGCTGCCTCCTGGCGCTCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CAA 90 bp TTGACGAACTGGCCGGGCAGCGCCGTCCACTGGCCCGTGGCCAGGTaGAGACAGTCGATGGCGCAGTGCAGGAAGTCGTCGGAAGGTCCG +
Preference number: 6 (lower is better)
Translates to: LTNWPGSAVHWPVAR*RQSMAQCRKSSEGP
Trigger: CGGACCTTCCGACGACTTCCTGCACTGCGCCATCGACTGTCTCAACCTGGCCACGGGCCAGTGGACGGCGCTGCCCGGCCAGTTCGTCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CCA 72 bp TTGCTGTTGACGAACTGGCCGGGCAGCGCCGTCCACTaGCCCGTGGCCAGGTTGAGACAGTCGATGGCGCAG +
Preference number: 6 (lower is better)
Translates to: LLLTNWPGSAVH*PVARLRQSMAQ
Trigger: CTGCGCCATCGACTGTCTCAACCTGGCCACGGGCCAGTGGACGGCGCTGCCCGGCCAGTTCGTCAACAGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CAA 72 bp GCGTCGCACAGCAATGCGCAGTTGTCCGACGTGAGGTaGTGCTCCAGAAAGCGAGCCAGCGCCGGCGCCTGG +
Preference number: 6 (lower is better)
Translates to: ASHSNAQLSDVR*CSRKRASAGAW
Trigger: CCAGGCGCCGGCGCTGGCTCGCTTTCTGGAGCACAACCTCACGTCGGACAACTGCGCATTGCTGTGCGACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CAA 72 bp CCGAAGGCGGCGGCCGCGTCGCACAGCAATGCGCAGTaGTCCGACGTGAGGTTGTGCTCCAGAAAGCGAGCC +
Preference number: 6 (lower is better)
Translates to: PKAAAASHSNAQ*SDVRLCSRKRA
Trigger: GGCTCGCTTTCTGGAGCACAACCTCACGTCGGACAACTGCGCATTGCTGTGCGACGCGGCCGCCGCCTTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 72 bp TCGCACAGCAATGCGCAGTTGTCCGACGTGAGGTTGTaGTCCAGAAAGCGAGCCAGCGCCGGCGCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: SHSNAQLSDVRL*SRKRASAGAWR
Trigger: CCTCCAGGCGCCGGCGCTGGCTCGCTTTCTGGAGCACAACCTCACGTCGGACAACTGCGCATTGCTGTGCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 72 bp CGATGGCGCAGTGCAGGAAGTCGTCGGAAGGTCCGTTaGGCACCACATAGAGGCTGTCGCGGTGGGCCACCA +
Preference number: 6 (lower is better)
Translates to: RWRSAGSRRKVR*APHRGCRGGPP
Trigger: TGGTGGCCCACCGCGACAGCCTCTATGTGGTGCGCAACGGACCTTCCGACGACTTCCTGCACTGCGCCATCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 72 bp TGGCCCGTGGCCAGGTTGAGACAGTCGATGGCGCAGTaGAGGAAGTCGTCGGAAGGTCCGTTGCGCACCACA +
Preference number: 6 (lower is better)
Translates to: WPVARLRQSMAQ*RKSSEGPLRTT
Trigger: TGTGGTGCGCAACGGACCTTCCGACGACTTCCTGCACTGCGCCATCGACTGTCTCAACCTGGCCACGGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS GCA 72 bp TCCTCCCTCCTAAAGCCAGCCCAGAGGTCACAGTTCTaGCGTTGTCGAAGTCACAGGCCCAGGAGCGCCAGG +
Preference number: 6 (lower is better)
Translates to: SSLLKPAQRSQF*RCRSHRPRSAR
Trigger: CCTGGCGCTCCTGGGCCTGTGACTTCGACAACGGCAGAACTGTGACCTCTGGGCTGGCTTTAGGAGGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5
CDS CAA 72 bp CCTCCTAAAGCCAGCCCAGAGGTCACAGTTCTGCCGTaGTCGAAGTCACAGGCCCAGGAGCGCCAGGAGGCA +
Preference number: 6 (lower is better)
Translates to: PPKASPEVTVLP*SKSQAQERQEA
Trigger: TGCCTCCTGGCGCTCCTGGGCCTGTGACTTCGACAACGGCAGAACTGTGACCTCTGGGCTGGCTTTAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432196.5