RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KAZN (Homo sapiens)

Ensembl gene IDs: ENSG00000189337

Ensembl transcript IDs: ENST00000361144.9, ENST00000376028.8, ENST00000376030.7, ENST00000400797.3, ENST00000400798.6, ENST00000491547.1, ENST00000503743.5, ENST00000636203.1, ENST00000636564.1

Found 1397 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCACACGCACCCCACGCACGGCCACACGCGCACCCACGCTCGCTTaGACACACGCCCACACGCACAGACACGCCTGCGGGCAGCAGGCG +
Preference number: 1 (lower is better)
Translates to: CTRTPRTATRAPTLA*THAHTHRHACGQQA
Trigger: CGCCTGCTGCCCGCAGGCGTGTCTGTGCGTGTGGGCGTGTGTGCAAGCGAGCGTGGGTGCGCGTGTGGCCGTGCGTGGGGTGCGTGTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR GCA 90 bp GAGGCGCTCGGCCACACCCAGCACCCATGTGTGCCAGCGCACACGTaGACACGCACCCCACGCACGGCCACACGCGCACCCACGCTCGCT +
Preference number: 1 (lower is better)
Translates to: EALGHTQHPCVPAHT*TRTPRTATRAPTLA
Trigger: AGCGAGCGTGGGTGCGCGTGTGGCCGTGCGTGGGGTGCGTGTGCACGTGTGCGCTGGCACACATGGGTGCTGGGTGTGGCCGAGCGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 90 bp GCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTaGTCGTACCCTTGGATGTGTGGCAGGCTGTCTTGCCCTGAACTC +
Preference number: 1 (lower is better)
Translates to: AAGGPSENRLRPGSH*SYPWMCGRLSCPEL
Trigger: GAGTTCAGGGCAAGACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 90 bp AGCAGGAAGAGCCCTCCGGAGCCTCGAAAAGCAGAGTGGAAGTGGTaGTGCCCAGGACGCATGGGCTCTGATGGGAAGAGGGAGGTGGGC +
Preference number: 1 (lower is better)
Translates to: SRKSPPEPRKAEWKW*CPGRMGSDGKREVG
Trigger: GCCCACCTCCCTCTTCCCATCAGAGCCCATGCGTCCTGGGCACCACCACTTCCACTCTGCTTTTCGAGGCTCCGGAGGGCTCTTCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 90 bp CCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCAGAAAGCTaGGAGTCTACCAGGCAGGTGCCTTCTCCACCCACAGGCACAAGC +
Preference number: 1 (lower is better)
Translates to: PRTKGPRRGSWGSES*ESTRQVPSPPTGTS
Trigger: GCTTGTGCCTGTGGGTGGAGAAGGCACCTGCCTGGTAGACTCTCAGCTTTCTGACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp CTCCAGGGACTGCTTGGCTGCTCCACAGTGACGGTCACTCTGAGGTaGAGCCTGTGTATCCTGGATGGAGGCAGGGCCGGACACTGTGAC +
Preference number: 1 (lower is better)
Translates to: LQGLLGCSTVTVTLR*SLCILDGGRAGHCD
Trigger: GTCACAGTGTCCGGCCCTGCCTCCATCCAGGATACACAGGCTCCACCTCAGAGTGACCGTCACTGTGGAGCAGCCAAGCAGTCCCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp CCTGCCTGGGCACGTTGCTGTTGCTGCCTCCCAAACGGCAGTTTCTaGGGTCCCAGGTCATCCAGGCTGGATGTGGCTTGGGAGAGACCT +
Preference number: 1 (lower is better)
Translates to: PAWARCCCCLPNGSF*GPRSSRLDVAWERP
Trigger: AGGTCTCTCCCAAGCCACATCCAGCCTGGATGACCTGGGACCCCAGAAACTGCCGTTTGGGAGGCAGCAACAGCAACGTGCCCAGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp TCCTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTaGGTCCCTGTCCTGGGGCCCTCCACGCTGGCCGGGCTGTGTAGA +
Preference number: 1 (lower is better)
Translates to: SCSASTQPCSVTSSF*VPVLGPSTLAGLCR
Trigger: TCTACACAGCCCGGCCAGCGTGGAGGGCCCCAGGACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 90 bp CTCCTGGGCGCTGTGGAGCTGAAACCGCAGAGTCCATCGGGATTTTaGCCAGGAGCAAGGGACATCCTCAGCCTGCGGCCGCTATGTACA +
Preference number: 1 (lower is better)
Translates to: LLGAVELKPQSPSGF*PGARDILSLRPLCT
Trigger: TGTACATAGCGGCCGCAGGCTGAGGATGTCCCTTGCTCCTGGGCAAAATCCCGATGGACTCTGCGGTTTCAGCTCCACAGCGCCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp GTGACAGGTCCTCTGGGCCCATCTCCAGCTGAACAGGAAAGTCCATaGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGC +
Preference number: 1 (lower is better)
Translates to: VTGPLGPSPAEQESP*PTQDRWAGVFSLLG
Trigger: GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTCCTGTTCAGCTGGAGATGGGCCCAGAGGACCTGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 90 bp GAGGTGGAGCCTGTGTATCCTGGATGGAGGCAGGGCCGGACACTGTaGCAGGTCCTCTGGGCCCATCTCCAGCTGAACAGGAAAGTCCAT +
Preference number: 1 (lower is better)
Translates to: EVEPVYPGWRQGRTL*QVLWAHLQLNRKVH
Trigger: ATGGACTTTCCTGTTCAGCTGGAGATGGGCCCAGAGGACCTGTCACAGTGTCCGGCCCTGCCTCCATCCAGGATACACAGGCTCCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 90 bp CTCTGGCCAAATCTTCCTGTTCTGCCAGTACCCAGCCCTGTTCAGTaGCGTCAAGCTTTTGGGTCCCTGTCCTGGGGCCCTCCACGCTGG +
Preference number: 1 (lower is better)
Translates to: LWPNLPVLPVPSPVQ*RQAFGSLSWGPPRW
Trigger: CCAGCGTGGAGGGCCCCAGGACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAGGAAGATTTGGCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp AGCCTGCGGCCGCTATGTACAGTGAGAACGACACCTGGGGCCATCTaGCTTCTCTTCCTTCCTGGGTCTCTCACGTTGGGTCTGGTGGAG +
Preference number: 1 (lower is better)
Translates to: SLRPLCTVRTTPGAI*LLFLPGSLTLGLVE
Trigger: CTCCACCAGACCCAACGTGAGAGACCCAGGAAGGAAGAGAAGCCAGATGGCCCCAGGTGTCGTTCTCACTGTACATAGCGGCCGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp GGACATCCTCAGCCTGCGGCCGCTATGTACAGTGAGAACGACACCTaGGGCCATCTGGCTTCTCTTCCTTCCTGGGTCTCTCACGTTGGG +
Preference number: 1 (lower is better)
Translates to: GHPQPAAAMYSENDT*GHLASLPSWVSHVG
Trigger: CCCAACGTGAGAGACCCAGGAAGGAAGAGAAGCCAGATGGCCCCAGGTGTCGTTCTCACTGTACATAGCGGCCGCAGGCTGAGGATGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp CCATCTCCAGCTGAACAGGAAAGTCCATGGCCCACCCAAGACAGGTaGGCTGGTGTCTTCTCTCTCCTGGGCGCTGTGGAGCTGAAACCG +
Preference number: 1 (lower is better)
Translates to: PSPAEQESPWPTQDR*AGVFSLLGAVELKP
Trigger: CGGTTTCAGCTCCACAGCGCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTCCTGTTCAGCTGGAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp CCTGCACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTaGGTGGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTG +
Preference number: 1 (lower is better)
Translates to: PARIIHRLPTQRSHS*VDRQTALQYVHPHV
Trigger: CACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp ATGCCCACATTGCCCTGCAGGGACCAAGACCACACTCGGGCTGCTTaGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGT +
Preference number: 1 (lower is better)
Translates to: MPTLPCRDQDHTRAA*TGCSWSLFWSWPLC
Trigger: ACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCCGAGTGTGGTCTTGGTCCCTGCAGGGCAATGTGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp CCACGCTGGCCGGGCTGTGTAGAGACGCCCTTCTCTCCACTTTATTaGGTCCAGATTGTTGTGTGGCTTCTCCCCTCCTCTGCAGCCTGG +
Preference number: 1 (lower is better)
Translates to: PRWPGCVETPFSPLY*VQIVVWLLPSSAAW
Trigger: CCAGGCTGCAGAGGAGGGGAGAAGCCACACAACAATCTGGACCCAATAAAGTGGAGAGAAGGGCGTCTCTACACAGCCCGGCCAGCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 90 bp CCCTTGGCCCGGCTCGCGAGTCTTTGTAGAGAGCAGAGCTTACCCTaGCGACGATGGCGTTTTGTGGTTAAAGTGACTTGGGCGCACCCC +
Preference number: 1 (lower is better)
Translates to: PLARLASLCREQSLP*RRWRFVVKVTWAHP
Trigger: GGGGTGCGCCCAAGTCACTTTAACCACAAAACGCCATCGTCGTCAGGGTAAGCTCTGCTCTCTACAAAGACTCGCGAGCCGGGCCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR GCA 90 bp TCCAAGAAGTGCATCCACATCGTCCCCAGGTCCAGATGCCCACATTaGCCTGCAGGGACCAAGACCACACTCGGGCTGCTTGGACAGGAT +
Preference number: 1 (lower is better)
Translates to: SKKCIHIVPRSRCPH*PAGTKTTLGLLGQD
Trigger: ATCCTGTCCAAGCAGCCCGAGTGTGGTCTTGGTCCCTGCAGGGCAATGTGGGCATCTGGACCTGGGGACGATGTGGATGCACTTCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp AGAGCCGGTTTGACCTCTGACAAACCCAGCCAAGACAAGGCCCCTTaGCCCGGCTCGCGAGTCTTTGTAGAGAGCAGAGCTTACCCTGAC +
Preference number: 1 (lower is better)
Translates to: RAGLTSDKPSQDKAP*PGSRVFVESRAYPD
Trigger: GTCAGGGTAAGCTCTGCTCTCTACAAAGACTCGCGAGCCGGGCCAAGGGGCCTTGTCTTGGCTGGGTTTGTCAGAGGTCAAACCGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTaGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCAC +
Preference number: 1 (lower is better)
Translates to: HGSFTGSPLSVATPG*IGKQLFNTSTPMCH
Trigger: GTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 90 bp GAGAGCAGAGCTTACCCTGACGACGATGGCGTTTTGTGGTTAAAGTaGCTTGGGCGCACCCCCAGGACAGGGTCTGGTCCCACACGTTCA +
Preference number: 1 (lower is better)
Translates to: ESRAYPDDDGVLWLK*LGRTPRTGSGPTRS
Trigger: TGAACGTGTGGGACCAGACCCTGTCCTGGGGGTGCGCCCAAGTCACTTTAACCACAAAACGCCATCGTCGTCAGGGTAAGCTCTGCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR TCA 90 bp GAGACCTGTGGCACCAGGTTGGAGGGAGGTCTCACCTCTCCTTTCTaGGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAAT +
Preference number: 1 (lower is better)
Translates to: ETCGTRLEGGLTSPF*AVDCSFRTLWMRPN
Trigger: ATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAGAAAGGAGAGGTGAGACCTCCCTCCAACCTGGTGCCACAGGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 90 bp GCAGAGGCTCCTGGGGGTCAGAAAGCTGAGAGTCTACCAGGCAGGTaGCTTCTCCACCCACAGGCACAAGCTACAACAGCTTTCCAAGAA +
Preference number: 1 (lower is better)
Translates to: AEAPGGQKAESLPGR*LLHPQAQATTAFQE
Trigger: TTCTTGGAAAGCTGTTGTAGCTTGTGCCTGTGGGTGGAGAAGGCACCTGCCTGGTAGACTCTCAGCTTTCTGACCCCCAGGAGCCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 90 bp CCTGGAGGGAACACTGAGGTCACCTCTGGCCAAATCTTCCTGTTCTaGCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCC +
Preference number: 1 (lower is better)
Translates to: PGGNTEVTSGQIFLF*QYPALFSDVKLLGP
Trigger: GGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAGGAAGATTTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 90 bp TCAGGGCTCGGGAGATTCTCCTCGCTGGCCAGCCATTGGCAAGAATaGCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTT +
Preference number: 1 (lower is better)
Translates to: SGLGRFSSLASHWQE*QTQRLPLPTGFLLL
Trigger: AAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCATTCTTGCCAATGGCTGGCCAGCGAGGAGAATCTCCCGAGCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp GCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCCTaGGAGATTCTAAGTGTGGCTGATGGAACCAACCAGAATGGGGAG +
Preference number: 1 (lower is better)
Translates to: AQAAVTSWGTESKGS*EILSVADGTNQNGE
Trigger: CTCCCCATTCTGGTTGGTTCCATCAGCCACACTTAGAATCTCCCAGGATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 90 bp CTTTGTGTGTCAGGGCTCGGGAGATTCTCCTCGCTGGCCAGCCATTaGCAAGAATGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTT +
Preference number: 1 (lower is better)
Translates to: LCVSGLGRFSSLASH*QECQTQRLPLPTGF
Trigger: AAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCATTCTTGCCAATGGCTGGCCAGCGAGGAGAATCTCCCGAGCCCTGACACACAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp AACCAAAAGAGGCATTCGCGGTTGCCCGTGTTGCCTCAGGCCTGCTaGCCTCCTGCTGTGAACATTTTGGGCAATACTGTCTCTGCCAGT +
Preference number: 1 (lower is better)
Translates to: NQKRHSRLPVLPQAC*PPAVNILGNTVSAS
Trigger: ACTGGCAGAGACAGTATTGCCCAAAATGTTCACAGCAGGAGGCCAGCAGGCCTGAGGCAACACGGGCAACCGCGAATGCCTCTTTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp CCACAAAATGCCTTTGTGTGTCAGGGCTCGGGAGATTCTCCTCGCTaGCCAGCCATTGGCAAGAATGCCAGACTCAGAGGTTGCCATTGC +
Preference number: 1 (lower is better)
Translates to: PQNAFVCQGSGDSPR*PAIGKNARLRGCHC
Trigger: GCAATGGCAACCTCTGAGTCTGGCATTCTTGCCAATGGCTGGCCAGCGAGGAGAATCTCCCGAGCCCTGACACACAAAGGCATTTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 90 bp ATTCAAGTGCCCTGCTACAATTCTGGCTCACTCTGTGGGAATAACTaGCTGCCTGGGCACGTTGCTGTTGCTGCCTCCCAAACGGCAGTT +
Preference number: 1 (lower is better)
Translates to: IQVPCYNSGSLCGNN*LPGHVAVAASQTAV
Trigger: AACTGCCGTTTGGGAGGCAGCAACAGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCAGGGCACTTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 90 bp TTAAACCAAAAGAGGCATTCGCGGTTGCCCGTGTTGCCTCAGGCCTaGTGGCCTCCTGCTGTGAACATTTTGGGCAATACTGTCTCTGCC +
Preference number: 1 (lower is better)
Translates to: LNQKRHSRLPVLPQA*WPPAVNILGNTVSA
Trigger: GGCAGAGACAGTATTGCCCAAAATGTTCACAGCAGGAGGCCAGCAGGCCTGAGGCAACACGGGCAACCGCGAATGCCTCTTTTGGTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp GGAGGGAGCTCTGGGTGGGAAGAAGGTGGAGGATCCTTTCATGCATaGGCAGGAGAATGGGAGAGACAGAGAGAGAAGGAGAGAGAAGAA +
Preference number: 1 (lower is better)
Translates to: GGSSGWEEGGGSFHA*AGEWERQREKEREE
Trigger: TTCTTCTCTCTCCTTCTCTCTCTGTCTCTCCCATTCTCCTGCCCATGCATGAAAGGATCCTCCACCTTCTTCCCACCCAGAGCTCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR TCA 90 bp AAGGCTGCGTTTATGTCATTAGGGGGAACACCACGGTCTTCGGCATaGGAGAGGTGTAATTCTCAAGTTCATCAGAGCTCGGCTTCCCCC +
Preference number: 1 (lower is better)
Translates to: KAAFMSLGGTPRSSA*ERCNSQVHQSSASP
Trigger: GGGGGAAGCCGAGCTCTGATGAACTTGAGAATTACACCTCTCTCATGCCGAAGACCGTGGTGTTCCCCCTAATGACATAAACGCAGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 90 bp TGCATCCGTCCTTCCCTAATCATCACGTGGCTGTCATCTGGTCAATaGACTGAGGCCCGAAGGCTTGAGTCAAACTGGTTTTCAAGGCTG +
Preference number: 1 (lower is better)
Translates to: CIRPSLIITWLSSGQ*TEARRLESNWFSRL
Trigger: CAGCCTTGAAAACCAGTTTGACTCAAGCCTTCGGGCCTCAGTTCATTGACCAGATGACAGCCACGTGATGATTAGGGAAGGACGGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 90 bp CTGGCCTCCTGCTGTGAACATTTTGGGCAATACTGTCTCTGCCAGTaGCCCCCAATTGTCCACTTGTCTCCAGCAAGATCGAACCATGTA +
Preference number: 1 (lower is better)
Translates to: LASCCEHFGQYCLCQ*PPIVHLSPARSNHV
Trigger: TACATGGTTCGATCTTGCTGGAGACAAGTGGACAATTGGGGGTCACTGGCAGAGACAGTATTGCCCAAAATGTTCACAGCAGGAGGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 90 bp TATCGCTCCAAAGACGACAGAGAGTTGACAGGTTCACACACGGTTTaGGGTATGTACATCAATTACAGAGGTGGCGACGCAGGGGAGAGA +
Preference number: 1 (lower is better)
Translates to: YRSKDDRELTGSHTV*GMYINYRGGDAGER
Trigger: TCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCTTTGGAGCGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 90 bp ATAGCTTTCATTCTGGTGATAGGATATCTGCATCTCCTAGAAATGTaGCTGCTAAGCCCCACTCCTGCACGGATCATTCACCGGCTCCCC +
Preference number: 1 (lower is better)
Translates to: IAFILVIGYLHLLEM*LLSPTPARIIHRLP
Trigger: GGGGAGCCGGTGAATGATCCGTGCAGGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGAATGAAAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp AACTCAAGCCCCAGTGCAAACGGCCTTGAAGGAGGTCGAGCATCATaGTTCCAACAAGTGACTCGCTTTGATAACCCGATGTGTAAGCAG +
Preference number: 1 (lower is better)
Translates to: NSSPSANGLEGGRAS*FQQVTRFDNPMCKQ
Trigger: CTGCTTACACATCGGGTTATCAAAGCGAGTCACTTGTTGGAACCATGATGCTCGACCTCCTTCAAGGCCGTTTGCACTGGGGCTTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp TATTGGGTCCAGATTGTTGTGTGGCTTCTCCCCTCCTCTGCAGCCTaGGGTCTGAAAACAGCGATGCCAACAGACAGACAGATTTCCAAA +
Preference number: 1 (lower is better)
Translates to: YWVQIVVWLLPSSAA*GLKTAMPTDRQISK
Trigger: TTTGGAAATCTGTCTGTCTGTTGGCATCGCTGTTTTCAGACCCCAGGCTGCAGAGGAGGGGAGAAGCCACACAACAATCTGGACCCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 90 bp GAGTCTCTCTGCCAAGTCTCCGCCTTCTGTTCTTCTTGCCGACCTTaGAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCA +
Preference number: 1 (lower is better)
Translates to: ESLCQVSAFCSSCRP*SRVDVSGFSSRQSS
Trigger: TGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGCAAGAAGAACAGAAGGCGGAGACTTGGCAGAGAGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp GACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTaGCGACGCAGGGGAGAGAGGTTCACACTCGTGTTTTCACTTGTT +
Preference number: 1 (lower is better)
Translates to: DRFTHGLRYVHQLQR*RRRGERFTLVFSLV
Trigger: AACAAGTGAAAACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 90 bp AAACAGACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTaGACGAGGGACATTTACAAGCACAGAGTGCACAATAGTTTTGTT +
Preference number: 1 (lower is better)
Translates to: KQTTSSARRAPGVAV*TRDIYKHRVHNSFV
Trigger: AACAAAACTATTGTGCACTCTGTGCTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 90 bp GGGTGGGAAGAAGGTGGAGGATCCTTTCATGCATGGGCAGGAGAATaGGAGAGACAGAGAGAGAAGGAGAGAGAAGAACCAACAGAAAAA +
Preference number: 1 (lower is better)
Translates to: GWEEGGGSFHAWAGE*ERQREKEREEPTEK
Trigger: TTTTTCTGTTGGTTCTTCTCTCTCCTTCTCTCTCTGTCTCTCCCATTCTCCTGCCCATGCATGAAAGGATCCTCCACCTTCTTCCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR TCA 90 bp GTGCAAACGGCCTTGAAGGAGGTCGAGCATCATGGTTCCAACAAGTaGCTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCAT +
Preference number: 1 (lower is better)
Translates to: VQTALKEVEHHGSNK*LALITRCVSRIAMH
Trigger: ATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCACTTGTTGGAACCATGATGCTCGACCTCCTTCAAGGCCGTTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 90 bp CTGAACTCAACCTCTCTCAAAAGACAGACCCAAAGAAGGGGACCATaGCTGTCAGCACTCTGCTCACTAAAGTCGTGTTCTGTATGTCAG +
Preference number: 1 (lower is better)
Translates to: LNSTSLKRQTQRRGP*LSALCSLKSCSVCQ
Trigger: CTGACATACAGAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTCTGTCTTTTGAGAGAGGTTGAGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR TCA 90 bp GGACAGAAAAGTCCTTATGAGGGCCTCTGCCTGCTTGCTGTTTGCTaGCTTTTGGACCAGGTCAGAAGGAAAGTGTTGTTTGTTCTTGAG +
Preference number: 1 (lower is better)
Translates to: GQKSPYEGLCLLAVC*LLDQVRRKVLFVLE
Trigger: CTCAAGAACAAACAACACTTTCCTTCTGACCTGGTCCAAAAGTCAGCAAACAGCAAGCAGGCAGAGGCCCTCATAAGGACTTTTCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR TCA 90 bp GATACTGTGGAGGTTGTTAATTTAACAACCAACCCATCCTCATGTTaGGAAACCAGCTCCAAATGCTCACCTGGCTGTCAGGGATGGGGA +
Preference number: 1 (lower is better)
Translates to: DTVEVVNLTTNPSSC*ETSSKCSPGCQGWG
Trigger: TCCCCATCCCTGACAGCCAGGTGAGCATTTGGAGCTGGTTTCTCAACATGAGGATGGGTTGGTTGTTAAATTAACAACCTCCACAGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 90 bp CCAAGTCTCCGCCTTCTGTTCTTCTTGCCGACCTTGAAGCAGAGTTaGCGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGAT +
Preference number: 1 (lower is better)
Translates to: PSLRLLFFLPTLKQS*RFRFFQQTKLTQSD
Trigger: ATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGCAAGAAGAACAGAAGGCGGAGACTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp GAGAAGAACCAACAGAAAAAGCAAGCTTTGAAATCCAATGGTCCCTaGGTTCTGGCCACCCTAAACTACTTTGCACAGTTGGGTAGCAGC +
Preference number: 1 (lower is better)
Translates to: EKNQQKKQALKSNGP*VLATLNYFAQLGSS
Trigger: GCTGCTACCCAACTGTGCAAAGTAGTTTAGGGTGGCCAGAACCCAGGGACCATTGGATTTCAAAGCTTGCTTTTTCTGTTGGTTCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 90 bp AAGGAGAGAGAAGAACCAACAGAAAAAGCAAGCTTTGAAATCCAATaGTCCCTGGGTTCTGGCCACCCTAAACTACTTTGCACAGTTGGG +
Preference number: 1 (lower is better)
Translates to: KEREEPTEKASFEIQ*SLGSGHPKLLCTVG
Trigger: CCCAACTGTGCAAAGTAGTTTAGGGTGGCCAGAACCCAGGGACCATTGGATTTCAAAGCTTGCTTTTTCTGTTGGTTCTTCTCTCTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 90 bp AAAGTCCTTATGAGGGCCTCTGCCTGCTTGCTGTTTGCTGACTTTTaGACCAGGTCAGAAGGAAAGTGTTGTTTGTTCTTGAGACTTTGG +
Preference number: 1 (lower is better)
Translates to: KVLMRASACLLFADF*TRSEGKCCLFLRLW
Trigger: CCAAAGTCTCAAGAACAAACAACACTTTCCTTCTGACCTGGTCCAAAAGTCAGCAAACAGCAAGCAGGCAGAGGCCCTCATAAGGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 90 bp GTATTTATTGTTACAGTGTTAAAATTCACTCTCGGGGAAGCGATTTaGGGCCACGGCCCTAGAAACTGCATCTTTGTTCAGAGCCAACCC +
Preference number: 1 (lower is better)
Translates to: VFIVTVLKFTLGEAI*GHGPRNCIFVQSQP
Trigger: GGGTTGGCTCTGAACAAAGATGCAGTTTCTAGGGCCGTGGCCCCAAATCGCTTCCCCGAGAGTGAATTTTAACACTGTAACAATAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 90 bp TTGCTGACTTTTGGACCAGGTCAGAAGGAAAGTGTTGTTTGTTCTTaGGACTTTGGACACAATGTCCTATGCCTTCTGATAGAGATACTC +
Preference number: 1 (lower is better)
Translates to: LLTFGPGQKESVVCS*DFGHNVLCLLIEIL
Trigger: GAGTATCTCTATCAGAAGGCATAGGACATTGTGTCCAAAGTCTCAAGAACAAACAACACTTTCCTTCTGACCTGGTCCAAAAGTCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 90 bp TTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTaGAGGCTCTTGGCAGGTCTGAACATTAAACATTTCTTTTCTTCC +
Preference number: 1 (lower is better)
Translates to: FQGCAHGIYMFLEPC*RLLAGLNIKHFFSS
Trigger: GGAAGAAAAGAAATGTTTAATGTTCAGACCTGCCAAGAGCCTCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 90 bp AAAGAGTTGGAGCGAACTAGCTCTATATCATTTCTGTGTTGTAAATaGGAAATTAGCTACCCCATAACTTCCCATTGTCTCCTGAGAGGT +
Preference number: 1 (lower is better)
Translates to: KELERTSSISFLCCK*EISYPITSHCLLRG
Trigger: ACCTCTCAGGAGACAATGGGAAGTTATGGGGTAGCTAATTTCCCATTTACAACACAGAAATGATATAGAGCTAGTTCGCTCCAACTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 90 bp GTGCACACGCACCCCACGCACGGCCACACGCGCACCCACGCTCGCTaGCACACACGCCCACACGCACAGACACGCCTGCGGGCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: VHTHPTHGHTRTHAR*HTRPHAQTRLRAAG
Trigger: GCCTGCTGCCCGCAGGCGTGTCTGTGCGTGTGGGCGTGTGTGCAAGCGAGCGTGGGTGCGCGTGTGGCCGTGCGTGGGGTGCGTGTGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAACGCACAGACACGCCTaGGGGCAGCAGGCGCAGGGG +
Preference number: 2 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVTHRHA*GQQAQG
Trigger: CCCCTGCGCCTGCTGCCCGCAGGCGTGTCTGTGCGT...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR TCA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCAGGGCCGGACACTGTaGCAGGTCCTCTGGGCCCAT +
Preference number: 2 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFQGRTL*QVLWAH
Trigger: ATGGGCCCAGAGGACCTGTCACAGTGTCCGGCCCTG...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCACGCACAGACACGCCTaGGGGCAGCAGGCGCAGGGG +
Preference number: 2 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGITHRHA*GQQAQG
Trigger: CCCCTGCGCCTGCTGCCCGCAGGCGTGTCTGTGCGT...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAGCACCCACGCTCGCTTaGACACACGCCCACACGCAC +
Preference number: 2 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVAPTLA*THAHTH
Trigger: GTGCGTGTGGGCGTGTGTGCAAGCGAGCGTGGGTGC...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAACAATGCACTGGGCGCTaGGGTGTGGGGTTGGGGTCC +
Preference number: 2 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQQCTGR*GVGLGS
Trigger: GGACCCCAACCCCACACCCCAGCGCCCAGTGCATTG...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCGGGCCCATCTCCAGCTaGACAGGAAAGTCCATGGCC +
Preference number: 2 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFGPISS*TGKSMA
Trigger: GGCCATGGACTTTCCTGTTCAGCTGGAGATGGGCCC...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCAGAGGCATTCGCGGTTaGCCGTGTTGCCTCAGGCCT +
Preference number: 2 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVRGIRG*PCCLRP
Trigger: AGGCCTGAGGCAACACGGGCAACCGCGAATGCCTCT...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCCCCAGCACCCATGTGTaGCAGCGCACACGTGCACAC +
Preference number: 2 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGIPSTHV*QRTRAH
Trigger: GTGTGCACGTGTGCGCTGGCACACATGGGTGCTGGG...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAAAGAGGCAGCACTTCCTaGACCCGGCTCTGCCAATGC +
Preference number: 2 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQRGSTS*TRLCQC
Trigger: GCATTGGCAGAGCCGGGTGCAGGAAGTGCTGCCTCT...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAGAGGCAGCACTTCCTaGACCCGGCTCTGCCAATGC +
Preference number: 2 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGRGSTS*TRLCQC
Trigger: GCATTGGCAGAGCCGGGTGCAGGAAGTGCTGCCTCT...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCGCTAAGCCCCACTCCTaGACGGATCATTCACCGGCT +
Preference number: 2 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVAKPHS*TDHSPA
Trigger: AGCCGGTGAATGATCCGTGCAGGAGTGGGGCTTAGC...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCCAGGACAGGGTCTaGTCCCACACGTTCACACCA +
Preference number: 2 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVPQDRV*SHTFTP
Trigger: TGGTGTGAACGTGTGGGACCAGACCCTGTCCTGGGG...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTACAAGACAAGGCCCCTTaGCCCGGCTCGCGAGTCTTT +
Preference number: 2 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVQDKAP*PGSRVF
Trigger: AAAGACTCGCGAGCCGGGCCAAGGGGCCTTGTCTTG...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CCA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCACACCTGGGGCCATCTaGCTTCTCTTCCTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: SSPTPALSDVSARGSTSCTPGAI*LLFLPG
Trigger: CCCAGGAAGGAAGAGAAGCCAGATGGCCCCAGGTGT...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAAGGCCTCCTCCCACCTTaGCAGCTCCGTTTAAGGCTC +
Preference number: 2 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQGLLPP*QLRLRL
Trigger: GAGCCTTAAACGGAGCTGCCAAGGTGGGAGGAGGCC...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCCTCCAAATGCTCACCTaGCTGTCAGGGATGGGGAGC +
Preference number: 2 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVLQMLT*LSGMGS
Trigger: GCTCCCCATCCCTGACAGCCAGGTGAGCATTTGGAG...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 90 bp TCCCGCCGGAAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTaGGCAGCTCCGTTTAAGGCTCCAGGGACTGCTTGGCTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: SRRKGVLGNCGPPPT*AAPFKAPGTAWLLH
Trigger: GTGGAGCAGCCAAGCAGTCCCTGGAGCCTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTTCCGGCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAACAGAGATTCACCATATaGGGCCGTCGGTCATCCCCG +
Preference number: 2 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQQRFTI*GRRSSP
Trigger: CGGGGATGACCGACGGCCCCATATGGTGAATCTCTG...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 90 bp AGAGGTGGCGACGCAGGGGAGAGAGGTTCACACTCGTGTTTTCACTaGTTAGAGGCGCTCGGCCACACCCAGCACCCATGTGTGCCAGCG +
Preference number: 2 (lower is better)
Translates to: RGGDAGERGSHSCFH*LEALGHTQHPCVPA
Trigger: CGCTGGCACACATGGGTGCTGGGTGTGGCCGAGCGCCTCTAACAAGTGAAAACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CAA 90 bp TCTCCTGGGCGCTGTGGAGCTGAAACCGCAGAGTCCATCGGGATTTaGCCCAGGAGCAAGGGACATCCTCAGCCTGCGGCCGCTATGTAC +
Preference number: 2 (lower is better)
Translates to: SPGRCGAETAESIGI*PRSKGHPQPAAAMY
Trigger: GTACATAGCGGCCGCAGGCTGAGGATGTCCCTTGCTCCTGGGCAAAATCCCGATGGACTCTGCGGTTTCAGCTCCACAGCGCCCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAGAGCAGAGCTTACCCTaGCGACGATGGCGTTTTGTG +
Preference number: 2 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVEQSLP*RRWRFV
Trigger: CACAAAACGCCATCGTCGTCAGGGTAAGCTCTGCTC...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR TCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTACGAGGCACAGAGAGGTaGGGCCACTGGGAAGAAGCC +
Preference number: 2 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVRGTER*GHWEEA
Trigger: GGCTTCTTCCCAGTGGCCTCACCTCTCTGTGCCTCG...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCGAAGAACACACGCTTTaGGGGTTCTCAGAGGCTGAC +
Preference number: 2 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVEEHTL*GFSEAD
Trigger: GTCAGCCTCTGAGAACCCTCAAAGCGTGTGTTCTTC...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAAGCTCGGCTTCCCCCATaGGAGGAAACAATTTGCCAG +
Preference number: 2 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQARLPP*EETICQ
Trigger: CTGGCAAATTGTTTCCTCTCATGGGGGAAGCCGAGC...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCCCTGCCTGGCCCACCTaGATCCTAAACCCAGGACAA +
Preference number: 2 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGIPAWPT*ILNPGQ
Trigger: TTGTCCTGGGTTTAGGATGCAGGTGGGCCAGGCAGG...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CAA 90 bp CTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTGTaGCTGCCTCCCAAACGGCAGTTTCTGGGGTCCCAGGTCATCCAG +
Preference number: 2 (lower is better)
Translates to: LAHSVGITACLGTLL*LPPKRQFLGSQVIQ
Trigger: CTGGATGACCTGGGACCCCAGAAACTGCCGTTTGGGAGGCAGCAACAGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCGAGCAGAGCTTACCCTaGCGACGATGGCGTTTTGTG +
Preference number: 2 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGIEQSLP*RRWRFV
Trigger: CACAAAACGCCATCGTCGTCAGGGTAAGCTCTGCTC...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR TCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAAGCCGGTTTGACCTCTaGCAAACCCAGCCAAGACAA +
Preference number: 2 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVSRFDL*QTQPRQ
Trigger: TTGTCTTGGCTGGGTTTGTCAGAGGTCAAACCGGCT...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCGTGTTGCCTCAGGCCTaGTGGCCTCCTGCTGTGAAC +
Preference number: 2 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSVLPQA*WPPAVN
Trigger: GTTCACAGCAGGAGGCCAGCAGGCCTGAGGCAACAC...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCCTGGGTCTCTCACGTTaGGTCTGGTGGAGCCACCAG +
Preference number: 2 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSLGLSR*VWWSHQ
Trigger: CTGGTGGCTCCACCAGACCCAACGTGAGAGACCCAG...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAAGCTTCTCTTCCTTCCTaGGTCTCTCACGTTGGGTCT +
Preference number: 2 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQASLPS*VSHVGS
Trigger: AGACCCAACGTGAGAGACCCAGGAAGGAAGAGAAGC...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 90 bp TTCCAAGAAGTGCATCCACATCGTCCCCAGGTCCAGATGCCCACATaGCCCTGCAGGGACCAAGACCACACTCGGGCTGCTTGGACAGGA +
Preference number: 2 (lower is better)
Translates to: FQEVHPHRPQVQMPT*PCRDQDHTRAAWTG
Trigger: TCCTGTCCAAGCAGCCCGAGTGTGGTCTTGGTCCCTGCAGGGCAATGTGGGCATCTGGACCTGGGGACGATGTGGATGCACTTCTTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 90 bp TCCACGCTGGCCGGGCTGTGTAGAGACGCCCTTCTCTCCACTTTATaGGGTCCAGATTGTTGTGTGGCTTCTCCCCTCCTCTGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: STLAGLCRDALLSTL*GPDCCVASPLLCSL
Trigger: CAGGCTGCAGAGGAGGGGAGAAGCCACACAACAATCTGGACCCAATAAAGTGGAGAGAAGGGCGTCTCTACACAGCCCGGCCAGCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTATTAAAAGAGCCGGTTTaGCCTCTGACAAACCCAGCC +
Preference number: 2 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVLKEPV*PLTNPA
Trigger: GGCTGGGTTTGTCAGAGGTCAAACCGGCTCTTTTAA...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTATGGGCACGTTGCTGTTaGTGCCTCCCAAACGGCAGT +
Preference number: 2 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVWARCC*CLPNGS
Trigger: ACTGCCGTTTGGGAGGCAGCAACAGCAACGTGCCCA...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACCGCGGTTGCCCGTGTTaGCTCAGGCCTGCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDRGCPC*LRPAGL
Trigger: GAGGCCAGCAGGCCTGAGGCAACACGGGCAACCGCG...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACCGCGGTTGCCCGTGTTaGCTCAGGCCTGCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHRGCPC*LRPAGL
Trigger: GAGGCCAGCAGGCCTGAGGCAACACGGGCAACCGCG...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAAAATCCAATGGTCCCTaGGTTCTGGCCACCCTAAAC +
Preference number: 2 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVKSNGP*VLATLN
Trigger: GTTTAGGGTGGCCAGAACCCAGGGACCATTGGATTT...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTACAGCGTAGCCACTCCTaGGTGGATCGGCAAACAGCT +
Preference number: 2 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVQRSHS*VDRQTA
Trigger: AGCTGTTTGCCGATCCACCCAGGAGTGGCTACGCTG...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAAAGCTTCAGGACCCTATaGATGAGGCCGAATGTCATG +
Preference number: 2 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQSFRTL*MRPNVM
Trigger: CATGACATTCGGCCTCATCCATAGGGTCCTGAAGCT...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCAGGCTGGATGTGGCTTaGGAGAGACCTGTGGCACCA +
Preference number: 2 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSRLDVA*ERPVAP
Trigger: TGGTGCCACAGGTCTCTCCCAAGCCACATCCAGCCT...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 90 bp ACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTaGCTGTTGCTGCCTCCCAAACGGCAGTTTCTGGGGTCCCAGGTC +
Preference number: 2 (lower is better)
Translates to: TILAHSVGITACLGT*LLLPPKRQFLGSQV
Trigger: GACCTGGGACCCCAGAAACTGCCGTTTGGGAGGCAGCAACAGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 90 bp CCTTTGTGTGTCAGGGCTCGGGAGATTCTCCTCGCTGGCCAGCCATaGGCAAGAATGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTT +
Preference number: 2 (lower is better)
Translates to: PLCVRAREILLAGQP*ARMPDSEVAIAHRL
Trigger: AAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCATTCTTGCCAATGGCTGGCCAGCGAGGAGAATCTCCCGAGCCCTGACACACAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATGGCCGCTATGTACAGTaGGAACGACACCTGGGGCCA +
Preference number: 2 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDGRYVQ*ERHLGP
Trigger: TGGCCCCAGGTGTCGTTCTCACTGTACATAGCGGCC...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAACGAGGCACAGAGAGGTaGGGCCACTGGGAAGAAGCC +
Preference number: 2 (lower is better)
Translates to: LSCGLQLQDPMDEAECHERGTER*GHWEEA
Trigger: GGCTTCTTCCCAGTGGCCTCACCTCTCTGTGCCTCG...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAACAGAAGTATCGTAGATaGAGACATCGAGGCACAGAG +
Preference number: 2 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQQKYRR*RHRGTE
Trigger: CTCTGTGCCTCGATGTCTTCATCTACGATACTTCTG...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAAAACCCATCCTCATGTTaGGAAACCAGCTCCAAATGC +
Preference number: 2 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQNPSSC*ETSSKC
Trigger: GCATTTGGAGCTGGTTTCTCAACATGAGGATGGGTT...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCATCCTGCACCCGGCTCTaGCAATGCACTGGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPSCTRL*QCTGRW
Trigger: CCAGCGCCCAGTGCATTGGCAGAGCCGGGTGCAGGA...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGCTGGGTCTCTCACGTTaGGTCTGGTGGAGCCACCAG +
Preference number: 2 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKLGLSR*VWWSHQ
Trigger: CTGGTGGCTCCACCAGACCCAACGTGAGAGACCCAG...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATGGCCTCCTCCCACCTTaGCAGCTCCGTTTAAGGCTC +
Preference number: 2 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDGLLPP*QLRLRL
Trigger: GAGCCTTAAACGGAGCTGCCAAGGTGGGAGGAGGCC...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTATTGCCTCAGGCCTGCTaGCCTCCTGCTGTGAACATT +
Preference number: 2 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVLPQAC*PPAVNI
Trigger: AATGTTCACAGCAGGAGGCCAGCAGGCCTGAGGCAA...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTTGGGCGCTGTGGAGCTaGAACCGCAGAGTCCATCGG +
Preference number: 2 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPWALWS*NRRVHR
Trigger: CCGATGGACTCTGCGGTTTCAGCTCCACAGCGCCCA...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACCAGGGCCGGACACTGTaGCAGGTCCTCTGGGCCCAT +
Preference number: 2 (lower is better)
Translates to: ADLEAELTFQVFPADKAHQGRTL*QVLWAH
Trigger: ATGGGCCCAGAGGACCTGTCACAGTGTCCGGCCCTG...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAAAACAATTTGCCAGGTTaGAGAACACACGCTTTGAGG +
Preference number: 2 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQNNLPG*RTHALR
Trigger: CCTCAAAGCGTGTGTTCTTCAACCTGGCAAATTGTT...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCTGGCCTCCTGCTGTaGACATTTTGGGCAATACTG +
Preference number: 2 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVAGLLL*TFWAIL
Trigger: CAGTATTGCCCAAAATGTTCACAGCAGGAGGCCAGC...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAAGTGCCAGCGCACACGTaGACACGCACCCCACGCACG +
Preference number: 2 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQVPAHT*TRTPRT
Trigger: CGTGCGTGGGGTGCGTGTGCACGTGTGCGCTGGCAC...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTTGGAGGATCCTTTCATaGATGGGCAGGAGAATGGGA +
Preference number: 2 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCWRILS*MGRRMG
Trigger: TCCCATTCTCCTGCCCATGCATGAAAGGATCCTCCA...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTCAGGGACTGCTTGGCTaGTCCACAGTGACGGTCACT +
Preference number: 2 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCQGLLG*STVTVT
Trigger: AGTGACCGTCACTGTGGAGCAGCCAAGCAGTCCCTG...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGAAACCAGCTCCAAATaGTCACCTGGCTGTCAGGGA +
Preference number: 2 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVETSSK*SPGCQG
Trigger: TCCCTGACAGCCAGGTGAGCATTTGGAGCTGGTTTC...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTCCAGGAGTAGCGGTTTaGACGAGGGACATTTACAAG +
Preference number: 2 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCPGVAV*TRDIYK
Trigger: CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGG...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CCA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTGGATCCTTTCATGCATaGGCAGGAGAATGGGAGAGA +
Preference number: 2 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCGSFHA*AGEWER
Trigger: TCTCTCCCATTCTCCTGCCCATGCATGAAAGGATCC...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATCCAAGACAGGTGGGCTaGTGTCTTCTCTCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDPRQVG*CLLSPG
Trigger: CCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGG...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTCAGAGATTCACCATATaGGGCCGTCGGTCATCCCCG +
Preference number: 2 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCQRFTI*GRRSSP
Trigger: CGGGGATGACCGACGGCCCCATATGGTGAATCTCTG...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 90 bp TTGCCCGTGTTGCCTCAGGCCTGCTGGCCTCCTGCTGTGAACATTTaGGGCAATACTGTCTCTGCCAGTGACCCCCAATTGTCCACTTGT +
Preference number: 2 (lower is better)
Translates to: LPVLPQACWPPAVNI*GNTVSASDPQLSTC
Trigger: ACAAGTGGACAATTGGGGGTCACTGGCAGAGACAGTATTGCCCAAAATGTTCACAGCAGGAGGCCAGCAGGCCTGAGGCAACACGGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCAGAAAAAGCAAGCTTTaGAATCCAATGGTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGIRKSKL*NPMVPG
Trigger: CCCAGGGACCATTGGATTTCAAAGCTTGCTTTTTCT...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR TCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTGGGCGCTGTGGAGCTaGAACCGCAGAGTCCATCGG +
Preference number: 2 (lower is better)
Translates to: ADLEAELTFQVFPADKAHWALWS*NRRVHR
Trigger: CCGATGGACTCTGCGGTTTCAGCTCCACAGCGCCCA...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTACCACGGTCTTCGGCATaGGAGAGGTGTAATTCTCAA +
Preference number: 2 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVPRSSA*ERCNSQ
Trigger: TTGAGAATTACACCTCTCTCATGCCGAAGACCGTGG...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGTGGAGGGCTCAGGTaGTGGACTCTGTGTCCCCAC +
Preference number: 2 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWGGGLR*WTLCPH
Trigger: GTGGGGACACAGAGTCCAGCACCTGAGCCCTCCACC...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAACTTCCTTTTGCACACTaGTTCAACCTAAAGAGTTGG +
Preference number: 2 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQLPFAH*FNLKSW
Trigger: CCAACTCTTTAGGTTGAAGCAGTGTGCAAAAGGAAG...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACGTGTTGCCTCAGGCCTaGTGGCCTCCTGCTGTGAAC +
Preference number: 2 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDVLPQA*WPPAVN
Trigger: GTTCACAGCAGGAGGCCAGCAGGCCTGAGGCAACAC...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTCTCCCGCCCACCCCATaGAAAAATAGACATTCCAAT +
Preference number: 2 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCLPPTP*KNRHSN
Trigger: ATTGGAATGTCTATTTTTCCATGGGGTGGGCGGGAG...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCCTGTGTATCCTGGATaGAGGCAGGGCCGGACACTG +
Preference number: 2 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPPVYPG*RQGRTL
Trigger: CAGTGTCCGGCCCTGCCTCCATCCAGGATACACAGG...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCAGCTCCAGGGACTGCTTaGCTGCTCCACAGTGACGGT +
Preference number: 2 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPAPGTA*LLHSDG
Trigger: ACCGTCACTGTGGAGCAGCCAAGCAGTCCCTGGAGC...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACGCTCTGCCAATGCACTaGGCGCTGGGGTGTGGGGTT +
Preference number: 2 (lower is better)
Translates to: ADLEAELTFQVFPADKAHALPMH*ALGCGV
Trigger: AACCCCACACCCCAGCGCCCAGTGCATTGGCAGAGC...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCCATCTCCTAGAAATGTaGCTGCTAAGCCCCACTCCT +
Preference number: 2 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSHLLEM*LLSPTP
Trigger: AGGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATG...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAAGCAGATAGTGGGGTTTaGAATCTCAGTAAAGCCAAA +
Preference number: 2 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQADSGV*NLSKAK
Trigger: TTTGGCTTTACTGAGATTCCAAACCCCACTATCTGC...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGAGGCTCAGGCTGCTGTaGCAAGTTGGGGGACGGAGT +
Preference number: 2 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWRLRLL*QVGGRS
Trigger: ACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCT...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR TCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACGGGCCCATCTCCAGCTaGACAGGAAAGTCCATGGCC +
Preference number: 2 (lower is better)
Translates to: ADLEAELTFQVFPADKAHGPISS*TGKSMA
Trigger: GGCCATGGACTTTCCTGTTCAGCTGGAGATGGGCCC...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCCATGGTTCCAACAAGTaGCTCGCTTTGATAACCCGA +
Preference number: 2 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSHGSNK*LALITR
Trigger: TCGGGTTATCAAAGCGAGTCACTTGTTGGAACCATG...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCTCTTCTTGCCGACCTTaGAGCAGAGTTGACGTTTCA +
Preference number: 2 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSSSCRP*SRVDVS
Trigger: TGAAACGTCAACTCTGCTTCAAGGTCGGCAAGAAGA...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACCCCAGCCCTGTTCAGTaGCGTCAAGCTTTTGGGTCC +
Preference number: 2 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHPSPVQ*RQAFGS
Trigger: GGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGG...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAACCCAGCACCCATGTGTaGCAGCGCACACGTGCACAC +
Preference number: 2 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQPSTHV*QRTRAH
Trigger: GTGTGCACGTGTGCGCTGGCACACATGGGTGCTGGG...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCGGTTCACACACGGTTTaGGGTATGTACATCAATTAC +
Preference number: 2 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGIGSHTV*GMYINY
Trigger: GTAATTGATGTACATACCGCAAACCGTGTGTGAACC...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCACAGACCACATCCTCTaGCAGACGGGCTCCAGGAGT +
Preference number: 2 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFTDHIL*QTGSRS
Trigger: ACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTCTGT...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTAGTCCATCGGGATTTTaGCCAGGAGCAAGGGACATC +
Preference number: 2 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCSPSGF*PGARDI
Trigger: GATGTCCCTTGCTCCTGGGCAAAATCCCGATGGACT...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCAGGGACTGCTTGGCTaGTCCACAGTGACGGTCACT +
Preference number: 2 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPQGLLG*STVTVT
Trigger: AGTGACCGTCACTGTGGAGCAGCCAAGCAGTCCCTG...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGCAAGACAAGGCCCCTTaGCCCGGCTCGCGAGTCTTT +
Preference number: 2 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWQDKAP*PGSRVF
Trigger: AAAGACTCGCGAGCCGGGCCAAGGGGCCTTGTCTTG...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CCA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGAGTGAGAACGACACCTaGGGCCATCTGGCTTCTCTT +
Preference number: 2 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKSENDT*GHLASL
Trigger: AAGAGAAGCCAGATGGCCCCAGGTGTCGTTCTCACT...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTGGAGCCTGTGTATCCTaGATGGAGGCAGGGCCGGAC +
Preference number: 2 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLGACVS*MEAGPD
Trigger: GTCCGGCCCTGCCTCCATCCAGGATACACAGGCTCC...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTGCTCTGCCAATGCACTaGGCGCTGGGGTGTGGGGTT +
Preference number: 2 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLALPMH*ALGCGV
Trigger: AACCCCACACCCCAGCGCCCAGTGCATTGGCAGAGC...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTTTTCTTGAGCCCTGTTaGAGGCTCTTGGCAGGTCTG +
Preference number: 2 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCFLEPC*RLLAGL
Trigger: CAGACCTGCCAAGAGCCTCCAACAGGGCTCAAGAAA...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAACCTGTTGTGAATCTTaGAAACTCAAGCCCCAGTGC +
Preference number: 2 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVTCCES*KLKPQC
Trigger: GCACTGGGGCTTGAGTTTCCAAGATTCACAACAGGT...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACCCTGGCTGTCAGGGATaGGGAGCCTCATGGGTGAAA +
Preference number: 2 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHPGCQG*GASWVK
Trigger: TTTCACCCATGAGGCTCCCCATCCCTGACAGCCAGG...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp AGACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTAGCACCCACGCTCGCTTaGACACACGCCCACACGCAC +
Preference number: 2 (lower is better)
Translates to: RRQRVDRFTHGLRYVHQLAPTLA*THAHTH
Trigger: GTGCGTGTGGGCGTGTGTGCAAGCGAGCGTGGGTGC...TAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGACAGACCACATCCTCTaGCAGACGGGCTCCAGGAGT +
Preference number: 2 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWTDHIL*QTGSRS
Trigger: ACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTCTGT...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAAGGGAGGAACAGAAGCTaGTGGAGGCCCCTCGGAGAA +
Preference number: 2 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQGRNRS*WRPLGE
Trigger: TTCTCCGAGGGGCCTCCAGCAGCTTCTGTTCCTCCC...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGTGGGTAGGCTCAGGCTaGTGTGACAAGTTGGGGGAC +
Preference number: 2 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWWVGSG*CDKLGD
Trigger: GTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCA...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGATCCTGCACCCGGCTCTaGCAATGCACTGGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGSCTRL*QCTGRW
Trigger: CCAGCGCCCAGTGCATTGGCAGAGCCGGGTGCAGGA...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACGCACGTTGCTGTTGCTaGCTCCCAAACGGCAGTTTC +
Preference number: 2 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHARCCC*LPNGSF
Trigger: GAAACTGCCGTTTGGGAGGCAGCAACAGCAACGTGC...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGCTGCTGTGACAAGTTaGGGGACGGAGTCCAAGGGA +
Preference number: 2 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWAAVTS*GTESKG
Trigger: TCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGC...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGTCTTGTCTCCTGGGGTaGGTAGGCTCAGGCTGCTGT +
Preference number: 2 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWSCLLG*VGSGCC
Trigger: ACAGCAGCCTGAGCCTACCCACCCCAGGAGACAAGA...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACGTAGCCACTCCTGGGTaGATCGGCAAACAGCTCTTC +
Preference number: 2 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHVATPG*IGKQLF
Trigger: GAAGAGCTGTTTGCCGATCCACCCAGGAGTGGCTAC...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCAGAGATTCACCACCTaGGGCCCAGGATCAGAAGTG +
Preference number: 2 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPQRFTT*GPGSEV
Trigger: CACTTCTGATCCTGGGCCCCAGGTGGTGAATCTCTG...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 90 bp GTATCGCTCCAAAGACGACAGAGAGTTGACAGGTTCACACACGGTTaGCGGTATGTACATCAATTACAGAGGTGGCGACGCAGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: VSLQRRQRVDRFTHG*RYVHQLQRWRRRGE
Trigger: CTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCTTTGGAGCGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR TCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTACCCACCAATACCAAATaGTTTTGCTCTGTGGAGTTT +
Preference number: 2 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVPTNTK*FCSVEF
Trigger: AAACTCCACAGAGCAAAATCATTTGGTATTGGTGGG...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACCTGTCATCTGGTCAATaGACTGAGGCCCGAAGGCTT +
Preference number: 2 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHLSSGQ*TEARRL
Trigger: AAGCCTTCGGGCCTCAGTTCATTGACCAGATGACAG...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACGCTCGGCTTCCCCCATaGGAGGAAACAATTTGCCAG +
Preference number: 2 (lower is better)
Translates to: ADLEAELTFQVFPADKAHARLPP*EETICQ
Trigger: CTGGCAAATTGTTTCCTCTCATGGGGGAAGCCGAGC...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAATCCCCTAACAACACCTaGCTGGCCCACCTGCATCCT +
Preference number: 2 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQSPNNT*LAHLHP
Trigger: AGGATGCAGGTGGGCCAGGCAGGTGTTGTTAGGGGA...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCACAGTCAAGGGTAAGATaGTGTAGCCGAGAGTTCCCC +
Preference number: 2 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPQSRVR*CSREFP
Trigger: GGGGAACTCTCGGCTACAGCATCTTACCCTTGACTG...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACCAGTCAAGGGTAAGATaGTGTAGCCGAGAGTTCCCC +
Preference number: 2 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHQSRVR*CSREFP
Trigger: GGGGAACTCTCGGCTACAGCATCTTACCCTTGACTG...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCCAGGTGGAAGGATTTTaGATTCTCCCAAGAGAGATT +
Preference number: 2 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSQVEGF*ILPREI
Trigger: AATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTG...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTTGTCAAGCATTTCCCTaGCCCAGACCCCAAACTCAT +
Preference number: 2 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVACQAFP*PRPQTH
Trigger: ATGAGTTTGGGGTCTGGGGCAGGGAAATGCTTGACA...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACGTGGGAATAACTGCCTaGCTGGGCACGTTGCTGTTG +
Preference number: 2 (lower is better)
Translates to: ADLEAELTFQVFPADKAHVGITA*LGTLLL
Trigger: CAACAGCAACGTGCCCAGGCAGGCAGTTATTCCCAC...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACCAGCTTTCCAAGAAGTaGATCCACATCGTCCCCAGG +
Preference number: 2 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHQLSKK*IHIVPR
Trigger: CCTGGGGACGATGTGGATGCACTTCTTGGAAAGCTG...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACGCTTCTCTTCCTTCCTaGGTCTCTCACGTTGGGTCT +
Preference number: 2 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHASLPS*VSHVGS
Trigger: AGACCCAACGTGAGAGACCCAGGAAGGAAGAGAAGC...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTACACCTGGGGCCATCTaGCTTCTCTTCCTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLTPGAI*LLFLPG
Trigger: CCCAGGAAGGAAGAGAAGCCAGATGGCCCCAGGTGT...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACAGTGAGAACGACACCTaGGGCCATCTGGCTTCTCTT +
Preference number: 2 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHSENDT*GHLASL
Trigger: AAGAGAAGCCAGATGGCCCCAGGTGTCGTTCTCACT...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGAGGAGCCTGTGTATCCTaGATGGAGGCAGGGCCGGAC +
Preference number: 2 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGGACVS*MEAGPD
Trigger: GTCCGGCCCTGCCTCCATCCAGGATACACAGGCTCC...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTGGATGGGGAGCCTCATaGGTGAAAGAGGGTTGTGAT +
Preference number: 2 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPGWGAS*VKEGCD
Trigger: ATCACAACCCTCTTTCACCCATGAGGCTCCCCATCC...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGAGCCGGTTTGACCTCTaGCAAACCCAGCCAAGACAA +
Preference number: 2 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWSRFDL*QTQPRQ
Trigger: TTGTCTTGGCTGGGTTTGTCAGAGGTCAAACCGGCT...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR TCA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGGGCCGCTATGTACAGTaGGAACGACACCTGGGGCCA +
Preference number: 2 (lower is better)
Translates to: CHRAFQVEGFCILPREIQGRYVQ*ERHLGP
Trigger: TGGCCCCAGGTGTCGTTCTCACTGTACATAGCGGCC...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCCCAAGAGAGATTCAGTaGGCCAAGTCAGGACCCAAG +
Preference number: 2 (lower is better)
Translates to: SGDRISASPRNVAAKPHSPREIQ*AKSGPK
Trigger: CTTGGGTCCTGACTTGGCTCACTGAATCTCTCTTGG...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACCCACGGTCTTCGGCATaGGAGAGGTGTAATTCTCAA +
Preference number: 2 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDPRSSA*ERCNSQ
Trigger: TTGAGAATTACACCTCTCTCATGCCGAAGACCGTGG...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACTGTCAAGCATTTCCCTaGCCCAGACCCCAAACTCAT +
Preference number: 2 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDCQAFP*PRPQTH
Trigger: ATGAGTTTGGGGTCTGGGGCAGGGAAATGCTTGACA...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAACATCAATTACAGAGGTaGCGACGCAGGGGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQHQLQR*RRRGER
Trigger: CCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATG...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCACGGTCACTCTGAGGTaGAGCCTGTGTATCCTGGAT +
Preference number: 2 (lower is better)
Translates to: SGDRISASPRNVAAKPHSTVTLR*SLCILD
Trigger: ATCCAGGATACACAGGCTCCACCTCAGAGTGACCGT...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTTGTTTTAGGGAACTGTaGGCCTCCTCCCACCTTGGC +
Preference number: 2 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLCFREL*ASSHLG
Trigger: GCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACA...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACGGAGGTCGAGCATCATaGTTCCAACAAGTGACTCGC +
Preference number: 2 (lower is better)
Translates to: ADLEAELTFQVFPADKAHGGRAS*FQQVTR
Trigger: GCGAGTCACTTGTTGGAACCATGATGCTCGACCTCC...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 90 bp TCCAATGGTCCCTGGGTTCTGGCCACCCTAAACTACTTTGCACAGTaGGGTAGCAGCATGGTAACAGAACAGACAAGTCAACAGAGACAC +
Preference number: 2 (lower is better)
Translates to: SNGPWVLATLNYFAQ*GSSMVTEQTSQQRH
Trigger: GTGTCTCTGTTGACTTGTCTGTTCTGTTACCATGCTGCTACCCAACTGTGCAAAGTAGTTTAGGGTGGCCAGAACCCAGGGACCATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CAA 90 bp GTGCCCTTAGGAGGCCAAACATCCACCTGTCTACCAACTAGACATTaGGTCTCAGACAGCAAGAAAGGCTGCGTTTATGTCATTAGGGGG +
Preference number: 2 (lower is better)
Translates to: VPLGGQTSTCLPTRH*VSDSKKGCVYVIRG
Trigger: CCCCCTAATGACATAAACGCAGCCTTTCTTGCTGTCTGAGACCAAATGTCTAGTTGGTAGACAGGTGGATGTTTGGCCTCCTAAGGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACCAGAAGTATCGTAGATaGAGACATCGAGGCACAGAG +
Preference number: 2 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHQKYRR*RHRGTE
Trigger: CTCTGTGCCTCGATGTCTTCATCTACGATACTTCTG...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTCTTCCCATTGTCTCCTaGGAGGTTACAAATTGTGTT +
Preference number: 2 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCLPIVS*EVTNCV
Trigger: AACACAATTTGTAACCTCTCAGGAGACAATGGGAAG...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGTGGAGGATCCTTTCATaGATGGGCAGGAGAATGGGA +
Preference number: 2 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWWRILS*MGRRMG
Trigger: TCCCATTCTCCTGCCCATGCATGAAAGGATCCTCCA...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTAGTCCATCGGGATTTTaGCCAGGAGCAAGGGACATC +
Preference number: 2 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLSPSGF*PGARDI
Trigger: GATGTCCCTTGCTCCTGGGCAAAATCCCGATGGACT...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTAGACCCCAAACTCATTaGCACACTCCATACCACTGT +
Preference number: 2 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPRPQTH*HTPYHC
Trigger: ACAGTGGTATGGAGTGTGGCAATGAGTTTGGGGTCT...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACAGACCCCAAACTCATTaGCACACTCCATACCACTGT +
Preference number: 2 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHRPQTH*HTPYHC
Trigger: ACAGTGGTATGGAGTGTGGCAATGAGTTTGGGGTCT...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGTGGGTGGGAAGAAGGTaGAGGATCCTTTCATGCATG +
Preference number: 2 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWWVGRR*RILSCM
Trigger: CATGCATGAAAGGATCCTCCACCTTCTTCCCACCCA...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CCA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAAGCCCTCCTTTTGAAGTaGGTGCCTCCCCTAACAACA +
Preference number: 2 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQALLLK*VPPLTT
Trigger: TGTTGTTAGGGGAGGCACCCACTTCAAAAGGAGGGC...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CCA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGCCAAGACAGGTGGGCTaGTGTCTTCTCTCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: CHRAFQVEGFCILPREIQPRQVG*CLLSPG
Trigger: CCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGG...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTGCAGATAGTGGGGTTTaGAATCTCAGTAAAGCCAAA +
Preference number: 2 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCADSGV*NLSKAK
Trigger: TTTGGCTTTACTGAGATTCCAAACCCCACTATCTGC...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGAAGACGACAGAGAGTTaGCAGGTTCACACACGGTTT +
Preference number: 2 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWKTTES*QVHTRF
Trigger: AAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCTT...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGGCTAAGCCCCACTCCTaGACGGATCATTCACCGGCT +
Preference number: 2 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILAKPHS*TDHSPA
Trigger: AGCCGGTGAATGATCCGTGCAGGAGTGGGGCTTAGC...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAACTTCCTTTTGCACACTaGTTCAACCTAAAGAGTTGG +
Preference number: 2 (lower is better)
Translates to: LSCGLQLQDPMDEAECHELPFAH*FNLKSW
Trigger: CCAACTCTTTAGGTTGAAGCAGTGTGCAAAAGGAAG...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACTCAAATCATCAGCTCTaGATTCAAGTGCCCTGCTAC +
Preference number: 2 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDSNHQL*IQVPCY
Trigger: GTAGCAGGGCACTTGAATGCAGAGCTGATGATTTGA...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCCCTGTGTATCCTGGATaGAGGCAGGGCCGGACACTG +
Preference number: 2 (lower is better)
Translates to: FAHCFNLKSWSELALYHFPVYPG*RQGRTL
Trigger: CAGTGTCCGGCCCTGCCTCCATCCAGGATACACAGG...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAAACAGAGCTTTTCAGGTaGAAGGATTTTGCATTCTCC +
Preference number: 2 (lower is better)
Translates to: LSCGLQLQDPMDEAECHETELFR*KDFAFS
Trigger: GGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGT...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 90 bp TCATCACGTGGCTGTCATCTGGTCAATGAACTGAGGCCCGAAGGCTaGAGTCAAACTGGTTTTCAAGGCTGTGCTCATGGGATTTATATG +
Preference number: 2 (lower is better)
Translates to: SSRGCHLVNELRPEG*SQTGFQGCAHGIYM
Trigger: CATATAAATCCCATGAGCACAGCCTTGAAAACCAGTTTGACTCAAGCCTTCGGGCCTCAGTTCATTGACCAGATGACAGCCACGTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACCGGTTAGGACATTGGTaGGCTATGTCACCTATGTTT +
Preference number: 2 (lower is better)
Translates to: ADLEAELTFQVFPADKAHRLGHW*AMSPMF
Trigger: AAACATAGGTGACATAGCTCACCAATGTCCTAACCG...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACCCCACCAATACCAAATaGTTTTGCTCTGTGGAGTTT +
Preference number: 2 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHPTNTK*FCSVEF
Trigger: AAACTCCACAGAGCAAAATCATTTGGTATTGGTGGG...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACGATTTATATGTTTCTTaGGCCCTGTTGGAGGCTCTT +
Preference number: 2 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDDLYVS*ALLEAL
Trigger: AAGAGCCTCCAACAGGGCTCAAGAAACATATAAATC...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCGGTTCACACACGGTTTaGGGTATGTACATCAATTAC +
Preference number: 2 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFGSHTV*GMYINY
Trigger: GTAATTGATGTACATACCGCAAACCGTGTGTGAACC...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CCA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAACTCCCGCCCACCCCATaGAAAAATAGACATTCCAAT +
Preference number: 2 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQLPPTP*KNRHSN
Trigger: ATTGGAATGTCTATTTTTCCATGGGGTGGGCGGGAG...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACAGGCTTGAGTCAAACTaGTTTTCAAGGCTGTGCTCA +
Preference number: 2 (lower is better)
Translates to: ADLEAELTFQVFPADKAHRLESN*FSRLCS
Trigger: TGAGCACAGCCTTGAAAACCAGTTTGACTCAAGCCT...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGTTGCCTCAGGCCTGCTaGCCTCCTGCTGTGAACATT +
Preference number: 2 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILLPQAC*PPAVNI
Trigger: AATGTTCACAGCAGGAGGCCAGCAGGCCTGAGGCAA...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR TCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTCACCTATGTTTCAGGTaGCAGGGACATCACAACAAA +
Preference number: 2 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLHLCFR*QGHHNK
Trigger: TTTGTTGTGATGTCCCTGTCACCTGAAACATAGGTG...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTTGGTTTTCAAGGCTGTaGTCATGGGATTTATATGTT +
Preference number: 2 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVAWFSRL*SWDLYV
Trigger: AACATATAAATCCCATGAGCACAGCCTTGAAAACCA...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCTGTTTTAGGGAACTGTaGGCCTCCTCCCACCTTGGC +
Preference number: 2 (lower is better)
Translates to: FAHCFNLKSWSELALYHFCFREL*ASSHLG
Trigger: GCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACA...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACACAGAGCTTTTCAGGTaGAAGGATTTTGCATTCTCC +
Preference number: 2 (lower is better)
Translates to: ADLEAELTFQVFPADKAHTELFR*KDFAFS
Trigger: GGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGT...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACTACCAACTAGACATTTaGTCTCAGACAGCAAGAAAG +
Preference number: 2 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHYQLDI*SQTARK
Trigger: CTTTCTTGCTGTCTGAGACCAAATGTCTAGTTGGTA...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAGTTGGGTGAACGTTaGTTTCAAATCATCAGCTCT +
Preference number: 2 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDKLGER*FQIISS
Trigger: AGAGCTGATGATTTGAAACCAACGTTCACCCAACTT...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCACGGTCACTCTGAGGTaGAGCCTGTGTATCCTGGAT +
Preference number: 2 (lower is better)
Translates to: FAHCFNLKSWSELALYHFTVTLR*SLCILD
Trigger: ATCCAGGATACACAGGCTCCACCTCAGAGTGACCGT...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 90 bp TACCAAATGATTTTGCTCTGTGGAGTTTGTGTCTCGGTTAGGACATaGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACATCACA +
Preference number: 2 (lower is better)
Translates to: YQMILLCGVCVSVRT*VSYVTYVSGDRDIT
Trigger: TGTGATGTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGACACAAACTCCACAGAGCAAAATCATTTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 90 bp TTGTCTCCAGCAAGATCGAACCATGTAAGTGCCATTTCTGACAAGTaGGGTGAACGTTGGTTTCAAATCATCAGCTCTGCATTCAAGTGC +
Preference number: 2 (lower is better)
Translates to: LSPARSNHVSAISDK*GERWFQIISSAFKC
Trigger: GCACTTGAATGCAGAGCTGATGATTTGAAACCAACGTTCACCCAACTTGTCAGAAATGGCACTTACATGGTTCGATCTTGCTGGAGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR GCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGGACAGCAAGAAAGGCTaGGTTTATGTCATTAGGGGG +
Preference number: 2 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILDSKKG*VYVIRG
Trigger: CCCCCTAATGACATAAACGCAGCCTTTCTTGCTGTC...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 90 bp ACCAGATTAACAACACAACTGTATCGCTCCAAAGACGACAGAGAGTaGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGA +
Preference number: 2 (lower is better)
Translates to: TRLTTQLYRSKDDRE*TGSHTVCGMYINYR
Trigger: TCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCTTTGGAGCGATACAGTTGTGTTGTTAATCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CAA 90 bp TTGCTGTTTGCTGACTTTTGGACCAGGTCAGAAGGAAAGTGTTGTTaGTTCTTGAGACTTTGGACACAATGTCCTATGCCTTCTGATAGA +
Preference number: 2 (lower is better)
Translates to: LLFADFWTRSEGKCC*FLRLWTQCPMPSDR
Trigger: TCTATCAGAAGGCATAGGACATTGTGTCCAAAGTCTCAAGAACAAACAACACTTTCCTTCTGACCTGGTCCAAAAGTCAGCAAACAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR GCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGCAGGTGGAAGGATTTTaGATTCTCCCAAGAGAGATT +
Preference number: 2 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILQVEGF*ILPREI
Trigger: AATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTG...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 90 bp TTTGCTGACTTTTGGACCAGGTCAGAAGGAAAGTGTTGTTTGTTCTaGAGACTTTGGACACAATGTCCTATGCCTTCTGATAGAGATACT +
Preference number: 2 (lower is better)
Translates to: FADFWTRSEGKCCLF*RLWTQCPMPSDRDT
Trigger: AGTATCTCTATCAGAAGGCATAGGACATTGTGTCCAAAGTCTCAAGAACAAACAACACTTTCCTTCTGACCTGGTCCAAAAGTCAGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CCA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGAACAACAAAGGTTTGTTaGGTTAACAATGTCAAGCAT +
Preference number: 2 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGTTKVC*VNNVKH
Trigger: ATGCTTGACATTGTTAACCCAACAAACCTTTGTTGT...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 90 bp CGGTTTGGACGAGGGACATTTACAAGCACAGAGTGCACAATAGTTTaGTTATTTACAAATACACAGCAGTCCTTCAAGTTTTCAAGTTTC +
Preference number: 2 (lower is better)
Translates to: RFGRGTFTSTECTIV*LFTNTQQSFKFSSF
Trigger: GAAACTTGAAAACTTGAAGGACTGCTGTGTATTTGTAAATAACAAAACTATTGTGCACTCTGTGCTTGTAAATGTCCCTCGTCCAAACCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCACAACAAAGGTTTGTTaGGTTAACAATGTCAAGCAT +
Preference number: 2 (lower is better)
Translates to: FAHCFNLKSWSELALYHFTTKVC*VNNVKH
Trigger: ATGCTTGACATTGTTAACCCAACAAACCTTTGTTGT...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 72 bp GCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTaGACCCGGCTCTGCCAATGCACTGGGCGCTGGGGT +
Preference number: 3 (lower is better)
Translates to: ALSDVSARGSTS*TRLCQCTGRWG
Trigger: ACCCCAGCGCCCAGTGCATTGGCAGAGCCGGGTGCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 72 bp GCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTaGGTCCCTGTCCTGGGGCCCTCCACGCTGGCCGGG +
Preference number: 3 (lower is better)
Translates to: ASTQPCSVTSSF*VPVLGPSTLAG
Trigger: CCCGGCCAGCGTGGAGGGCCCCAGGACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCGGGCCTCCTCCCACCTaGGCAGCTCCGTTTAAGGCT +
Preference number: 3 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFGPPPT*AAPFKA
Trigger: AGCCTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCC...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCGTCCAGATGCCCACATaGCCCTGCAGGGACCAAGAC +
Preference number: 3 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVVQMPT*PCRDQD
Trigger: GTCTTGGTCCCTGCAGGGCAATGTGGGCATCTGGAC...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 72 bp GGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTaGTCGTACCCTTGGATGTGTGGCAGGCTGTCTTGC +
Preference number: 3 (lower is better)
Translates to: GPSENRLRPGSH*SYPWMCGRLSC
Trigger: GCAAGACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 72 bp CAAGCTTTTGGGTCCCTGTCCTGGGGCCCTCCACGCTaGCCGGGCTGTGTAGAGACGCCCTTCTCTCCACTT +
Preference number: 3 (lower is better)
Translates to: QAFGSLSWGPPR*PGCVETPFSPL
Trigger: AAGTGGAGAGAAGGGCGTCTCTACACAGCCCGGCCAGCGTGGAGGGCCCCAGGACAGGGACCCAAAAGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTCCAAGACAAGGCCCCTaGGCCCGGCTCGCGAGTCTT +
Preference number: 3 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCPRQGP*ARLASL
Trigger: AAGACTCGCGAGCCGGGCCAAGGGGCCTTGTCTTGG...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CAA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCGAGTCCATCGGGATTTaGCCCAGGAGCAAGGGACAT +
Preference number: 3 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFESIGI*PRSKGH
Trigger: ATGTCCCTTGCTCCTGGGCAAAATCCCGATGGACTC...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 72 bp CCTGTGTATCCTGGATGGAGGCAGGGCCGGACACTGTaGCAGGTCCTCTGGGCCCATCTCCAGCTGAACAGG +
Preference number: 3 (lower is better)
Translates to: PVYPGWRQGRTL*QVLWAHLQLNR
Trigger: CCTGTTCAGCTGGAGATGGGCCCAGAGGACCTGTCACAGTGTCCGGCCCTGCCTCCATCCAGGATACACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 72 bp GCTGTGGAGCTGAAACCGCAGAGTCCATCGGGATTTTaGCCAGGAGCAAGGGACATCCTCAGCCTGCGGCCG +
Preference number: 3 (lower is better)
Translates to: AVELKPQSPSGF*PGARDILSLRP
Trigger: CGGCCGCAGGCTGAGGATGTCCCTTGCTCCTGGGCAAAATCCCGATGGACTCTGCGGTTTCAGCTCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 72 bp CCTCCGGAGCCTCGAAAAGCAGAGTGGAAGTGGTGGTaGCCAGGACGCATGGGCTCTGATGGGAAGAGGGAG +
Preference number: 3 (lower is better)
Translates to: PPEPRKAEWKWW*PGRMGSDGKRE
Trigger: CTCCCTCTTCCCATCAGAGCCCATGCGTCCTGGGCACCACCACTTCCACTCTGCTTTTCGAGGCTCCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 72 bp CTGCTTGGCTGCTCCACAGTGACGGTCACTCTGAGGTaGAGCCTGTGTATCCTGGATGGAGGCAGGGCCGGA +
Preference number: 3 (lower is better)
Translates to: LLGCSTVTVTLR*SLCILDGGRAG
Trigger: TCCGGCCCTGCCTCCATCCAGGATACACAGGCTCCACCTCAGAGTGACCGTCACTGTGGAGCAGCCAAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCACTGTGGCCCTCCTTTaGAAGTGGGTGCCTCCCCTA +
Preference number: 3 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGITVALL*KWVPPL
Trigger: TAGGGGAGGCACCCACTTCAAAAGGAGGGCCACAGT...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR TCA 72 bp GGGCTGGTGTCTTCTCTCTCCTGGGCGCTGTGGAGCTaGAACCGCAGAGTCCATCGGGATTTTGCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: GLVSSLSWALWS*NRRVHRDFAQE
Trigger: CTCCTGGGCAAAATCCCGATGGACTCTGCGGTTTCAGCTCCACAGCGCCCAGGAGAGAGAAGACACCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 72 bp GGAACCAACCAGAATGGGGAGGGTGGAGGGCTCAGGTaGTGGACTCTGTGTCCCCACTGTGGCCCTCCTTTT +
Preference number: 3 (lower is better)
Translates to: GTNQNGEGGGLR*WTLCPHCGPPF
Trigger: AAAAGGAGGGCCACAGTGGGGACACAGAGTCCAGCACCTGAGCCCTCCACCCTCCCCATTCTGGTTGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR GCA 72 bp TGGCAGCTCCGTTTAAGGCTCCAGGGACTGCTTGGCTaGTCCACAGTGACGGTCACTCTGAGGTGGAGCCTG +
Preference number: 3 (lower is better)
Translates to: WQLRLRLQGLLG*STVTVTLRWSL
Trigger: CAGGCTCCACCTCAGAGTGACCGTCACTGTGGAGCAGCCAAGCAGTCCCTGGAGCCTTAAACGGAGCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 72 bp TGCATCCACATCGTCCCCAGGTCCAGATGCCCACATTaGCCTGCAGGGACCAAGACCACACTCGGGCTGCTT +
Preference number: 3 (lower is better)
Translates to: CIHIVPRSRCPH*PAGTKTTLGLL
Trigger: AAGCAGCCCGAGTGTGGTCTTGGTCCCTGCAGGGCAATGTGGGCATCTGGACCTGGGGACGATGTGGATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 72 bp TTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTaGATCGGCAAACAGCTCTTCAATACGTCCACCCCC +
Preference number: 3 (lower is better)
Translates to: FTGSPLSVATPG*IGKQLFNTSTP
Trigger: GGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 72 bp GCACGTTGCTGTTGCTGCCTCCCAAACGGCAGTTTCTaGGGTCCCAGGTCATCCAGGCTGGATGTGGCTTGG +
Preference number: 3 (lower is better)
Translates to: ARCCCCLPNGSF*GPRSSRLDVAW
Trigger: CCAAGCCACATCCAGCCTGGATGACCTGGGACCCCAGAAACTGCCGTTTGGGAGGCAGCAACAGCAACGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCCCCTGTTGGAGGCTCTaGGCAGGTCTGAACATTAAA +
Preference number: 3 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVPCWRL*AGLNIK
Trigger: TTTAATGTTCAGACCTGCCAAGAGCCTCCAACAGGG...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 72 bp GCTTACCCTGACGACGATGGCGTTTTGTGGTTAAAGTaGCTTGGGCGCACCCCCAGGACAGGGTCTGGTCCC +
Preference number: 3 (lower is better)
Translates to: AYPDDDGVLWLK*LGRTPRTGSGP
Trigger: GGGACCAGACCCTGTCCTGGGGGTGCGCCCAAGTCACTTTAACCACAAAACGCCATCGTCGTCAGGGTAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 72 bp ACCTTGGCAGCTCCGTTTAAGGCTCCAGGGACTGCTTaGCTGCTCCACAGTGACGGTCACTCTGAGGTGGAG +
Preference number: 3 (lower is better)
Translates to: TLAAPFKAPGTA*LLHSDGHSEVE
Trigger: CTCCACCTCAGAGTGACCGTCACTGTGGAGCAGCCAAGCAGTCCCTGGAGCCTTAAACGGAGCTGCCAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 72 bp TTGCCCTGCAGGGACCAAGACCACACTCGGGCTGCTTaGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGG +
Preference number: 3 (lower is better)
Translates to: LPCRDQDHTRAA*TGCSWSLFWSW
Trigger: CCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCCGAGTGTGGTCTTGGTCCCTGCAGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTCCTGGGTCTCTCACGTaGGGTCTGGTGGAGCCACCA +
Preference number: 3 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCPGSLT*GLVEPP
Trigger: TGGTGGCTCCACCAGACCCAACGTGAGAGACCCAGG...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTCCTGGGTCTCTCACGTaGGGTCTGGTGGAGCCACCA +
Preference number: 3 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVAPGSLT*GLVEPP
Trigger: TGGTGGCTCCACCAGACCCAACGTGAGAGACCCAGG...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCCCAGTGCAAACGGCCTaGAAGGAGGTCGAGCATCAT +
Preference number: 3 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSPVQTA*KEVEHH
Trigger: ATGATGCTCGACCTCCTTCAAGGCCGTTTGCACTGG...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCGCCATTTCTGACAAGTaGGGTGAACGTTGGTTTCAA +
Preference number: 3 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVAISDK*GERWFQ
Trigger: TTGAAACCAACGTTCACCCAACTTGTCAGAAATGGC...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCCAGTGACCCCCAATaGTCCACTTGTCTCCAGCAA +
Preference number: 3 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVASDPQ*STCLQQ
Trigger: TTGCTGGAGACAAGTGGACAATTGGGGGTCACTGGC...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCGACCTTGAAGCAGAGTaGACGTTTCAGGTTTTTCCA +
Preference number: 3 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVDLEAE*TFQVFP
Trigger: TGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTC...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 72 bp CCAAGTCAGGACCCAAGTTCTCAGTCAAGGGTAAGATaGTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTC +
Preference number: 3 (lower is better)
Translates to: PSQDPSSQSRVR*CSREFPNPRPV
Trigger: GACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTACCCTTGACTGAGAACTTGGGTCCTGACTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 72 bp CCTGGGGGTCAGAAAGCTGAGAGTCTACCAGGCAGGTaGCTTCTCCACCCACAGGCACAAGCTACAACAGCT +
Preference number: 3 (lower is better)
Translates to: PGGQKAESLPGR*LLHPQAQATTA
Trigger: AGCTGTTGTAGCTTGTGCCTGTGGGTGGAGAAGGCACCTGCCTGGTAGACTCTCAGCTTTCTGACCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 72 bp AACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTaGATGTGTGGCAGGCTGTCTTGCCCTGAACTCAAC +
Preference number: 3 (lower is better)
Translates to: NRLRPGSHWSYP*MCGRLSCPELN
Trigger: GTTGAGTTCAGGGCAAGACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 72 bp AGGCATTCGCGGTTGCCCGTGTTGCCTCAGGCCTGCTaGCCTCCTGCTGTGAACATTTTGGGCAATACTGTC +
Preference number: 3 (lower is better)
Translates to: RHSRLPVLPQAC*PPAVNILGNTV
Trigger: GACAGTATTGCCCAAAATGTTCACAGCAGGAGGCCAGCAGGCCTGAGGCAACACGGGCAACCGCGAATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTACAGAAAAAGCAAGCTTaGAAATCCAATGGTCCCTGG +
Preference number: 3 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVQKKQA*KSNGPW
Trigger: CCAGGGACCATTGGATTTCAAAGCTTGCTTTTTCTG...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR TCA 72 bp GGAGTCCAAGGGATCCTGGGAGATTCTAAGTGTGGCTaGTGGAACCAACCAGAATGGGGAGGGTGGAGGGCT +
Preference number: 3 (lower is better)
Translates to: GVQGILGDSKCG*WNQPEWGGWRA
Trigger: AGCCCTCCACCCTCCCCATTCTGGTTGGTTCCATCAGCCACACTTAGAATCTCCCAGGATCCCTTGGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR TCA 72 bp AATCTTCCTGTTCTGCCAGTACCCAGCCCTGTTCAGTaGCGTCAAGCTTTTGGGTCCCTGTCCTGGGGCCCT +
Preference number: 3 (lower is better)
Translates to: NLPVLPVPSPVQ*RQAFGSLSWGP
Trigger: AGGGCCCCAGGACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAGGAAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 72 bp CCTCCTTTTGAAGTGGGTGCCTCCCCTAACAACACCTaGCTGGCCCACCTGCATCCTAAACCCAGGACAAGA +
Preference number: 3 (lower is better)
Translates to: PPFEVGASPNNT*LAHLHPKPRTR
Trigger: TCTTGTCCTGGGTTTAGGATGCAGGTGGGCCAGGCAGGTGTTGTTAGGGGAGGCACCCACTTCAAAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR GCA 72 bp CCCTGCTACAATTCTGGCTCACTCTGTGGGAATAACTaGCTGCCTGGGCACGTTGCTGTTGCTGCCTCCCAA +
Preference number: 3 (lower is better)
Translates to: PCYNSGSLCGNN*LPGHVAVAASQ
Trigger: TTGGGAGGCAGCAACAGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 72 bp AAGAGGCATTCGCGGTTGCCCGTGTTGCCTCAGGCCTaGTGGCCTCCTGCTGTGAACATTTTGGGCAATACT +
Preference number: 3 (lower is better)
Translates to: KRHSRLPVLPQA*WPPAVNILGNT
Trigger: AGTATTGCCCAAAATGTTCACAGCAGGAGGCCAGCAGGCCTGAGGCAACACGGGCAACCGCGAATGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 72 bp GGGAGATTCTCCTCGCTGGCCAGCCATTGGCAAGAATaGCAGACTCAGAGGTTGCCATTGCCCACAGGCTTT +
Preference number: 3 (lower is better)
Translates to: GRFSSLASHWQE*QTQRLPLPTGF
Trigger: AAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCATTCTTGCCAATGGCTGGCCAGCGAGGAGAATCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 72 bp AGAAAGGCCTGGAGGGAGCTCTGGGTGGGAAGAAGGTaGAGGATCCTTTCATGCATGGGCAGGAGAATGGGA +
Preference number: 3 (lower is better)
Translates to: RKAWRELWVGRR*RILSCMGRRMG
Trigger: TCCCATTCTCCTGCCCATGCATGAAAGGATCCTCCACCTTCTTCCCACCCAGAGCTCCCTCCAGGCCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 72 bp ATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTaGGTGGATCGGCAAACAGCTCTTCAATACGTCCAC +
Preference number: 3 (lower is better)
Translates to: IIHRLPTQRSHS*VDRQTALQYVH
Trigger: GTGGACGTATTGAAGAGCTGTTTGCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACGGGCCTCCTCCCACCTaGGCAGCTCCGTTTAAGGCT +
Preference number: 3 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDGPPPT*AAPFKA
Trigger: AGCCTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCC...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACACCTGTGGCACCAGGTaGGAGGGAGGTCTCACCTCT +
Preference number: 3 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDTCGTR*EGGLTS
Trigger: AGAGGTGAGACCTCCCTCCAACCTGGTGCCACAGGT...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACACCTGTGGCACCAGGTaGGAGGGAGGTCTCACCTCT +
Preference number: 3 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHTCGTR*EGGLTS
Trigger: AGAGGTGAGACCTCCCTCCAACCTGGTGCCACAGGT...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACAAGAGGCATTCGCGGTaGCCCGTGTTGCCTCAGGCC +
Preference number: 3 (lower is better)
Translates to: ADLEAELTFQVFPADKAHKRHSR*PVLPQA
Trigger: GGCCTGAGGCAACACGGGCAACCGCGAATGCCTCTT...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 72 bp GCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCCTaGGAGATTCTAAGTGTGGCTGATGGAACCAACCAG +
Preference number: 3 (lower is better)
Translates to: AVTSWGTESKGS*EILSVADGTNQ
Trigger: CTGGTTGGTTCCATCAGCCACACTTAGAATCTCCCAGGATCCCTTGGACTCCGTCCCCCAACTTGTCACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 72 bp CCGGGCTGTGTAGAGACGCCCTTCTCTCCACTTTATTaGGTCCAGATTGTTGTGTGGCTTCTCCCCTCCTCT +
Preference number: 3 (lower is better)
Translates to: PGCVETPFSPLY*VQIVVWLLPSS
Trigger: AGAGGAGGGGAGAAGCCACACAACAATCTGGACCCAATAAAGTGGAGAGAAGGGCGTCTCTACACAGCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTGAGTCCATCGGGATTTaGCCCAGGAGCAAGGGACAT +
Preference number: 3 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVAESIGI*PRSKGH
Trigger: ATGTCCCTTGCTCCTGGGCAAAATCCCGATGGACTC...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGTCTCGGTTAGGACATaGGTGAGCTATGTCACCTAT +
Preference number: 3 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVVSVRT*VSYVTY
Trigger: ATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 72 bp CCCTCTGTAGCCTGTGACAATCAGCTTGAGTCTCTCTaGCAAGTCTCCGCCTTCTGTTCTTCTTGCCGACCT +
Preference number: 3 (lower is better)
Translates to: PSVACDNQLESL*QVSAFCSSCRP
Trigger: AGGTCGGCAAGAAGAACAGAAGGCGGAGACTTGGCAGAGAGACTCAAGCTGATTGTCACAGGCTACAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 72 bp ACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTaGACGAGGGACATTTACAAGCACAGAGTGCACAAT +
Preference number: 3 (lower is better)
Translates to: TSSARRAPGVAV*TRDIYKHRVHN
Trigger: ATTGTGCACTCTGTGCTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CAA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTAGGTTCACACACGGTTaGCGGTATGTACATCAATTA +
Preference number: 3 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCRFTHG*RYVHQL
Trigger: TAATTGATGTACATACCGCAAACCGTGTGTGAACCT...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CAA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTATCAGGTGGAAGGATTTaGCATTCTCCCAAGAGAGAT +
Preference number: 3 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVSGGRI*HSPKRD
Trigger: ATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGA...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCCATTTCTGACAAGTaGGGTGAACGTTGGTTTCAA +
Preference number: 3 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVAISDK*GERWFQ
Trigger: TTGAAACCAACGTTCACCCAACTTGTCAGAAATGGC...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 72 bp CGGCTCGCGAGTCTTTGTAGAGAGCAGAGCTTACCCTaGCGACGATGGCGTTTTGTGGTTAAAGTGACTTGG +
Preference number: 3 (lower is better)
Translates to: RLASLCREQSLP*RRWRFVVKVTW
Trigger: CCAAGTCACTTTAACCACAAAACGCCATCGTCGTCAGGGTAAGCTCTGCTCTCTACAAAGACTCGCGAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR GCA 72 bp TGTCAAGCATTTCCCTGCCCCAGACCCCAAACTCATTaGCACACTCCATACCACTGTCACGGAGTGCAGATA +
Preference number: 3 (lower is better)
Translates to: CQAFPCPRPQTH*HTPYHCHGVQI
Trigger: TATCTGCACTCCGTGACAGTGGTATGGAGTGTGGCAATGAGTTTGGGGTCTGGGGCAGGGAAATGCTTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 72 bp TGGCCAGCCATTGGCAAGAATGCCAGACTCAGAGGTTaGCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTC +
Preference number: 3 (lower is better)
Translates to: WPAIGKNARLRG*HCPQAFFSFPF
Trigger: GAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCATTCTTGCCAATGGCTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 72 bp CCCAGTGCAAACGGCCTTGAAGGAGGTCGAGCATCATaGTTCCAACAAGTGACTCGCTTTGATAACCCGATG +
Preference number: 3 (lower is better)
Translates to: PSANGLEGGRAS*FQQVTRFDNPM
Trigger: CATCGGGTTATCAAAGCGAGTCACTTGTTGGAACCATGATGCTCGACCTCCTTCAAGGCCGTTTGCACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACCCCCCAATTGTCCACTaGTCTCCAGCAAGATCGAAC +
Preference number: 3 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHPPIVH*SPARSN
Trigger: GTTCGATCTTGCTGGAGACAAGTGGACAATTGGGGG...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAACACTCGTGTTTTCACTaGTTAGAGGCGCTCGGCCAC +
Preference number: 3 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQHSCFH*LEALGH
Trigger: GTGGCCGAGCGCCTCTAACAAGTGAAAACACGAGTG...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CAA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCTGAGGCCCGAAGGCTaGAGTCAAACTGGTTTTCAA +
Preference number: 3 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPLRPEG*SQTGFQ
Trigger: TTGAAAACCAGTTTGACTCAAGCCTTCGGGCCTCAG...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 72 bp GAATCTTGGAAACTCAAGCCCCAGTGCAAACGGCCTTaGAGGAGGTCGAGCATCATGGTTCCAACAAGTGAC +
Preference number: 3 (lower is better)
Translates to: ESWKLKPQCKRP*RRSSIMVPTSD
Trigger: GTCACTTGTTGGAACCATGATGCTCGACCTCCTTCAAGGCCGTTTGCACTGGGGCTTGAGTTTCCAAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 72 bp GCCATTGGCAAGAATGCCAGACTCAGAGGTTGCCATTaGCCACAGGCTTTCTTCTCCTTTCCTTTCACAGCA +
Preference number: 3 (lower is better)
Translates to: AIGKNARLRGCH*PQAFFSFPFTA
Trigger: TGCTGTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCATTCTTGCCAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 72 bp ACACACGGTTTGCGGTATGTACATCAATTACAGAGGTaGCGACGCAGGGGAGAGAGGTTCACACTCGTGTTT +
Preference number: 3 (lower is better)
Translates to: THGLRYVHQLQR*RRRGERFTLVF
Trigger: AAACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 72 bp GAAGGTGGAGGATCCTTTCATGCATGGGCAGGAGAATaGGAGAGACAGAGAGAGAAGGAGAGAGAAGAACCA +
Preference number: 3 (lower is better)
Translates to: EGGGSFHAWAGE*ERQREKEREEP
Trigger: TGGTTCTTCTCTCTCCTTCTCTCTCTGTCTCTCCCATTCTCCTGCCCATGCATGAAAGGATCCTCCACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR TCA 72 bp CCTTCCCTAATCATCACGTGGCTGTCATCTGGTCAATaGACTGAGGCCCGAAGGCTTGAGTCAAACTGGTTT +
Preference number: 3 (lower is better)
Translates to: PSLIITWLSSGQ*TEARRLESNWF
Trigger: AAACCAGTTTGACTCAAGCCTTCGGGCCTCAGTTCATTGACCAGATGACAGCCACGTGATGATTAGGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 72 bp TGCCAAGTCTCCGCCTTCTGTTCTTCTTGCCGACCTTaGAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGA +
Preference number: 3 (lower is better)
Translates to: CQVSAFCSSCRP*SRVDVSGFSSR
Trigger: TCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGCAAGAAGAACAGAAGGCGGAGACTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTCCCTGTTGGAGGCTCTaGGCAGGTCTGAACATTAAA +
Preference number: 3 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLPCWRL*AGLNIK
Trigger: TTTAATGTTCAGACCTGCCAAGAGCCTCCAACAGGG...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 72 bp ACCTCTCTCAAAAGACAGACCCAAAGAAGGGGACCATaGCTGTCAGCACTCTGCTCACTAAAGTCGTGTTCT +
Preference number: 3 (lower is better)
Translates to: TSLKRQTQRRGP*LSALCSLKSCS
Trigger: AGAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTCTGTCTTTTGAGAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR TCA 72 bp AGTCCTTATGAGGGCCTCTGCCTGCTTGCTGTTTGCTaGCTTTTGGACCAGGTCAGAAGGAAAGTGTTGTTT +
Preference number: 3 (lower is better)
Translates to: SPYEGLCLLAVC*LLDQVRRKVLF
Trigger: AAACAACACTTTCCTTCTGACCTGGTCCAAAAGTCAGCAAACAGCAAGCAGGCAGAGGCCCTCATAAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR TCA 72 bp GCCTTGAAGGAGGTCGAGCATCATGGTTCCAACAAGTaGCTCGCTTTGATAACCCGATGTGTAAGCAGAATC +
Preference number: 3 (lower is better)
Translates to: ALKEVEHHGSNK*LALITRCVSRI
Trigger: GATTCTGCTTACACATCGGGTTATCAAAGCGAGTCACTTGTTGGAACCATGATGCTCGACCTCCTTCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 72 bp CGCCTTCTGTTCTTCTTGCCGACCTTGAAGCAGAGTTaGCGTTTCAGGTTTTTCCAGCAGACAAAGCTCACT +
Preference number: 3 (lower is better)
Translates to: RLLFFLPTLKQS*RFRFFQQTKLT
Trigger: AGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGCAAGAAGAACAGAAGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 72 bp AAAGACGACAGAGAGTTGACAGGTTCACACACGGTTTaGGGTATGTACATCAATTACAGAGGTGGCGACGCA +
Preference number: 3 (lower is better)
Translates to: KDDRELTGSHTV*GMYINYRGGDA
Trigger: TGCGTCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 72 bp ATTCTGGTGATAGGATATCTGCATCTCCTAGAAATGTaGCTGCTAAGCCCCACTCCTGCACGGATCATTCAC +
Preference number: 3 (lower is better)
Translates to: ILVIGYLHLLEM*LLSPTPARIIH
Trigger: GTGAATGATCCGTGCAGGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 72 bp GTTACAGTGTTAAAATTCACTCTCGGGGAAGCGATTTaGGGCCACGGCCCTAGAAACTGCATCTTTGTTCAG +
Preference number: 3 (lower is better)
Translates to: VTVLKFTLGEAI*GHGPRNCIFVQ
Trigger: CTGAACAAAGATGCAGTTTCTAGGGCCGTGGCCCCAAATCGCTTCCCCGAGAGTGAATTTTAACACTGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAGGTGGAAGGATTTaGCATTCTCCCAAGAGAGAT +
Preference number: 3 (lower is better)
Translates to: ADLEAELTFQVFPADKAHSGGRI*HSPKRD
Trigger: ATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGA...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACGGATTTATATGTTTCTaGAGCCCTGTTGGAGGCTCT +
Preference number: 3 (lower is better)
Translates to: ADLEAELTFQVFPADKAHGFICF*SPVGGS
Trigger: AGAGCCTCCAACAGGGCTCAAGAAACATATAAATCC...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACAAACAATTTGCCAGGTaGAAGAACACACGCTTTGAG +
Preference number: 3 (lower is better)
Translates to: ADLEAELTFQVFPADKAHKQFAR*KNTRFE
Trigger: CTCAAAGCGTGTGTTCTTCAACCTGGCAAATTGTTT...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 72 bp CAACACAACTGTATCGCTCCAAAGACGACAGAGAGTTaGCAGGTTCACACACGGTTTGCGGTATGTACATCA +
Preference number: 3 (lower is better)
Translates to: QHNCIAPKTTES*QVHTRFAVCTS
Trigger: TGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCTTTGGAGCGATACAGTTGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR TCA 72 bp GAGGAAACAATTTGCCAGGTTGAAGAACACACGCTTTaGGGGTTCTCAGAGGCTGACACCTGTTGTGAATCT +
Preference number: 3 (lower is better)
Translates to: EETICQVEEHTL*GFSEADTCCES
Trigger: AGATTCACAACAGGTGTCAGCCTCTGAGAACCCTCAAAGCGTGTGTTCTTCAACCTGGCAAATTGTTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 72 bp GTAATTCTCAAGTTCATCAGAGCTCGGCTTCCCCCATaGGAGGAAACAATTTGCCAGGTTGAAGAACACACG +
Preference number: 3 (lower is better)
Translates to: VILKFIRARLPP*EETICQVEEHT
Trigger: CGTGTGTTCTTCAACCTGGCAAATTGTTTCCTCTCATGGGGGAAGCCGAGCTCTGATGAACTTGAGAATTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 72 bp TTTATGTCATTAGGGGGAACACCACGGTCTTCGGCATaGGAGAGGTGTAATTCTCAAGTTCATCAGAGCTCG +
Preference number: 3 (lower is better)
Translates to: FMSLGGTPRSSA*ERCNSQVHQSS
Trigger: CGAGCTCTGATGAACTTGAGAATTACACCTCTCTCATGCCGAAGACCGTGGTGTTCCCCCTAATGACATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 72 bp GTTAGCAGAAAGCACGACTACTGTTGTCTAGAGGTGTaGGTTGAGCTGTTAGTTGTTAAGGACGAGCAGAAG +
Preference number: 3 (lower is better)
Translates to: VSRKHDYCCLEV*VELLVVKDEQK
Trigger: CTTCTGCTCGTCCTTAACAACTAACAGCTCAACCCACACCTCTAGACAACAGTAGTCGTGCTTTCTGCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 72 bp GAGGCCAAACATCCACCTGTCTACCAACTAGACATTTaGTCTCAGACAGCAAGAAAGGCTGCGTTTATGTCA +
Preference number: 3 (lower is better)
Translates to: EAKHPPVYQLDI*SQTARKAAFMS
Trigger: TGACATAAACGCAGCCTTTCTTGCTGTCTGAGACCAAATGTCTAGTTGGTAGACAGGTGGATGTTTGGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR-3UTR CAA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGACCCCATAACTTCCCATaGTCTCCTGAGAGGTTACAA +
Preference number: 3 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGPHNFP*SPERLQ
Trigger: TTGTAACCTCTCAGGAGACAATGGGAAGTTATGGGG...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 72 bp TTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTaGGCCCTGTTGGAGGCTCTTGGCAGGTCTGAACAT +
Preference number: 3 (lower is better)
Translates to: FSRLCSWDLYVS*ALLEALGRSEH
Trigger: ATGTTCAGACCTGCCAAGAGCCTCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR GCA 72 bp TTGGTTTCAAATCATCAGCTCTGCATTCAAGTGCCCTaGTACAATTCTGGCTCACTCTGTGGGAATAACTGC +
Preference number: 3 (lower is better)
Translates to: LVSNHQLCIQVP*YNSGSLCGNNC
Trigger: GCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCAGGGCACTTGAATGCAGAGCTGATGATTTGAAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 72 bp CAACAGAAAAAGCAAGCTTTGAAATCCAATGGTCCCTaGGTTCTGGCCACCCTAAACTACTTTGCACAGTTG +
Preference number: 3 (lower is better)
Translates to: QQKKQALKSNGP*VLATLNYFAQL
Trigger: CAACTGTGCAAAGTAGTTTAGGGTGGCCAGAACCCAGGGACCATTGGATTTCAAAGCTTGCTTTTTCTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR-3UTR CAA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGCAACCCATCCTCATGTaGAGAAACCAGCTCCAAATG +
Preference number: 3 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILQPILM*RNQLQM
Trigger: CATTTGGAGCTGGTTTCTCAACATGAGGATGGGTTG...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 72 bp TGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTaGAGGCTCTTGGCAGGTCTGAACATTAAACATTTC +
Preference number: 3 (lower is better)
Translates to: CAHGIYMFLEPC*RLLAGLNIKHF
Trigger: GAAATGTTTAATGTTCAGACCTGCCAAGAGCCTCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR TCA 72 bp TTTGGACCAGGTCAGAAGGAAAGTGTTGTTTGTTCTTaGGACTTTGGACACAATGTCCTATGCCTTCTGATA +
Preference number: 3 (lower is better)
Translates to: FGPGQKESVVCS*DFGHNVLCLLI
Trigger: TATCAGAAGGCATAGGACATTGTGTCCAAAGTCTCAAGAACAAACAACACTTTCCTTCTGACCTGGTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CCA 72 bp GAGCGAACTAGCTCTATATCATTTCTGTGTTGTAAATaGGAAATTAGCTACCCCATAACTTCCCATTGTCTC +
Preference number: 3 (lower is better)
Translates to: ERTSSISFLCCK*EISYPITSHCL
Trigger: GAGACAATGGGAAGTTATGGGGTAGCTAATTTCCCATTTACAACACAGAAATGATATAGAGCTAGTTCGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CCA 72 bp TTTCTTCCTTTTGCACACTGCTTCAACCTAAAGAGTTaGAGCGAACTAGCTCTATATCATTTCTGTGTTGTA +
Preference number: 3 (lower is better)
Translates to: FLPFAHCFNLKS*SELALYHFCVV
Trigger: TACAACACAGAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAAAGGAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCCGCCTTCCGACAGGCTaGGGCTCTGCCGCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGRLPTG*GSAAWG
Trigger: GCCCCACGCGGCAGAGCCTCAGCCTGTCGGAAGGCG...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAACCTTTCCTGCCCGCGTaGCGCTGGAGGCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQPFLPA*RWRPCQ
Trigger: CTGGCAGGGCCTCCAGCGTCACGCGGGCAGGAAAGG...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAGCGGTCCGCGCCTGCTaGACGCGAGGAATTCGGCCG +
Preference number: 4 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVAVRAC*TRGIRP
Trigger: CGGCCGAATTCCTCGCGTGCAGCAGGCGCGGACCGC...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361144.9
CDS-3UTR CCA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCTGGGGCCCTCCACGCTaGCCGGGCTGTGTAGAGACG +
Preference number: 4 (lower is better)
Translates to: SSPTPALSDVSARGSTSCWGPPR*PGCVET
Trigger: CGTCTCTACACAGCCCGGCCAGCGTGGAGGGCCCCA...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCTGGGGCCCTCCACGCTaGCCGGGCTGTGTAGAGACG +
Preference number: 4 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFWGPPR*PGCVET
Trigger: CGTCTCTACACAGCCCGGCCAGCGTGGAGGGCCCCA...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCGGGCCAGCTGGACCCTaGGCTCGGTGGCCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGIGPAGP*ARWPRG
Trigger: TCCTCTCGGCCACCGAGCTCAGGGTCCAGCTGGCCC...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATGACGCTACCAGCGGCTaGGCGAGGGGCTCCGACGGC +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHDATSG*ARGSDG
Trigger: GCCGTCGGAGCCCCTCGCGCAGCCGCTGGTAGCGTC...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361144.9
CDS-3UTR GCA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCGCCAGGCCTGGACGGTaGCCGCCTTCCAGTGGGACA +
Preference number: 4 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGARPGR*PPSSGT
Trigger: TGTCCCACTGGAAGGCGGGCACCGTCCAGGCCTGGC...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCCGCAGCTTGCGCCGGTaGAGGGAGCTGCACACCCCA +
Preference number: 4 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGRSLRR*RELHTP
Trigger: TGGGGTGTGCAGCTCCCTGCACCGGCGCAAGCTGCG...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAACGCAGCTTGCGCCGGTaGAGGGAGCTGCACACCCCA +
Preference number: 4 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQRSLRR*RELHTP
Trigger: TGGGGTGTGCAGCTCCCTGCACCGGCGCAAGCTGCG...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCGGGACTGAGACCTGCTaGAGCGGCCCCCAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGGTETC*SGPQPA
Trigger: CGCGGGCTGGGGGCCGCTGCAGCAGGTCTCAGTCCC...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCTCCTTCTGGGCCAGCTaGACCCTGAGCTCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVSFWAS*TLSSVA
Trigger: GGCCACCGAGCTCAGGGTCCAGCTGGCCCAGAAGGA...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCTCCTTCTGGGCCAGCTaGACCCTGAGCTCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SSPTPALSDVSARGSTSCSFWAS*TLSSVA
Trigger: GGCCACCGAGCTCAGGGTCCAGCTGGCCCAGAAGGA...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCTCCTTGAGGTCCAGCTaGGAGCGCAGTGCCGTGGCG +
Preference number: 4 (lower is better)
Translates to: SSPTPALSDVSARGSTSCSLRSS*ERSAVA
Trigger: CGCCACGGCACTGCGCTCCCAGCTGGACCTCAAGGA...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCTCCTGGCTGGCCGACTaGACCGCCCCATCGATGCGG +
Preference number: 4 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGSWLAD*TAPSMR
Trigger: CCGCATCGATGGGGCGGTCCAGTCGGCCAGCCAGGA...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCTGGTCACCTCCTGGCTaGCCGACTGGACCGCCCCAT +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVWSPPG*PTGPPH
Trigger: ATGGGGCGGTCCAGTCGGCCAGCCAGGAGGTGACCA...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCACCTCCAGCCAGGCCTaGACGGTGCCCGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGTSSQA*TVPAFQ
Trigger: CTGGAAGGCGGGCACCGTCCAGGCCTGGCTGGAGGT...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTGGGCCAGCTGGACCCTaGGCTCGGTGGCCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCGPAGP*ARWPRG
Trigger: TCCTCTCGGCCACCGAGCTCAGGGTCCAGCTGGCCC...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCCAGATGCGTCGGAGATaGCAGAGGGCTGCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVQMRRR*QRAAGS
Trigger: ACTCCCGGCAGCCCTCTGTCATCTCCGACGCATCTG...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTACGCCTTCCGACAGGCTaGGGCTCTGCCGCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVRLPTG*GSAAWG
Trigger: GCCCCACGCGGCAGAGCCTCAGCCTGTCGGAAGGCG...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCCAGGGCCGGACACTGTaGCAGGTCCTCTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGQGRTL*QVLWAH
Trigger: ATGGGCCCAGAGGACCTGTCACAGTGTCCGGCCCTG...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCAGAGGGAGGTGGGCCTaGGCATGGGCCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVRGRWA*AWAFFS
Trigger: GGAGAAGAAGGCCCATGCTCAGGCCCACCTCCCTCT...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCGGAGTCGTGGCTTCTTaGCCCGGAAGGGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVGVVAS*PGRVAG
Trigger: TCCAGCCACCCTTCCGGGTCAAGAAGCCACGACTCC...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR GCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATACGCACAGACACGCCTaGGGGCAGCAGGCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHTHRHA*GQQAQG
Trigger: CCCCTGCGCCTGCTGCCCGCAGGCGTGTCTGTGCGT...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCTCTGCCGCGTGGGGCTaGACTGGCTGTCCGAGTCAT +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVSAAWG*TGCPSH
Trigger: ATGACTCGGACAGCCAGTGCAGCCCCACGCGGCAGA...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCTGCAGCCGGTCCATCTaGTCCTCGCCTTCCGACAGG +
Preference number: 4 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFCSRSI*SSPSDR
Trigger: CCTGTCGGAAGGCGAGGAGCAGATGGACCGGCTGCA...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCTCCTGCACCCGGCTCTaGCAATGCACTGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGSCTRL*QCTGRW
Trigger: CCAGCGCCCAGTGCATTGGCAGAGCCGGGTGCAGGA...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCGGGACGCCTAGGCCCTaGCGCTCCCCACTCCTCGCG +
Preference number: 4 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSGTPRP*RSPLLA
Trigger: CGCGAGGAGTGGGGAGCGGCAGGGCCTAGGCGTCCC...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCGGATGTGCTTCCCACTaGGGATGCCCAGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVGCASH*GCPGQW
Trigger: CCACTGCCCTGGGCATCCCCAGTGGGAAGCACATCC...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCGGATGCCTGTGGAGTTaGCTGGGTGGAAGACGGCGC +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVGCLWS*LGGRRR
Trigger: GCGCCGTCTTCCACCCAGCCAACTCCACAGGCATCC...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCTGTCTCGAACCCACTTaGGCACCCGCTGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVCLEPT*APAGWS
Trigger: GGACCAACCAGCGGGTGCTCAAGTGGGTTCGAGACA...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCGGCCGCTATGTACAGTaGGAACGACACCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SSPTPALSDVSARGSTSCGRYVQ*ERHLGP
Trigger: TGGCCCCAGGTGTCGTTCTCACTGTACATAGCGGCC...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAGCTCTGGCTAGCTCCTaGTCCTTCTGGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVALASS*SFWASW
Trigger: CCAGCTGGCCCAGAAGGAGCAGGAGCTAGCCAGAGC...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAGGCATGGCGAGGGAATaGCGCTTGGGGACGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVGMARE*RLGTSL
Trigger: CAAGGACGTCCCCAAGCGGCATTCCCTCGCCATGCC...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATACTCTGCCGGATGGCTaGGGTCAGCGGGAGGTCCGC +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHTLPDG*GQREVR
Trigger: GCGGACCTCCCGCTGACCGCAGCCATCCGGCAGAGT...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCGCCTTCGGCGGCAGATaGGTCGGAGATGACAGAGGG +
Preference number: 4 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGAFGGR*VGDDRG
Trigger: CCCTCTGTCATCTCCGACGCATCTGCCGCCGAAGGC...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAGGTGGAGGGCTCAGGTaGTGGACTCTGTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVGGGLR*WTLCPH
Trigger: GTGGGGACACAGAGTCCAGCACCTGAGCCCTCCACC...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCTCTGCCGCGTGGGGCTaGACTGGCTGTCCGAGTCAT +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGSAAWG*TGCPSH
Trigger: ATGACTCGGACAGCCAGTGCAGCCCCACGCGGCAGA...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCGACAGGCTGAGGCTCTaGCGCGTGGGGCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGDRLRL*RVGLHW
Trigger: CCAGTGCAGCCCCACGCGGCAGAGCCTCAGCCTGTC...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCACCAGCTCCACCTGCTaGAGCCGGTCCATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGTSSTC*SRSICS
Trigger: GGAGCAGATGGACCGGCTGCAGCAGGTGGAGCTGGT...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCGCTCAGCCTCCCGGATaGCTGTGGAGTTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGAQPPG*LWSWLG
Trigger: ACCCAGCCAACTCCACAGGCATCCGGGAGGCTGAGC...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCAGAGGCAGCACTTCCTaGACCCGGCTCTGCCAATGC +
Preference number: 4 (lower is better)
Translates to: SSPTPALSDVSARGSTSCRGSTS*TRLCQC
Trigger: GCATTGGCAGAGCCGGGTGCAGGAAGTGCTGCCTCT...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCCCTGCCTGGGCACGTTaGTGTTGCTGCCTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVPAWAR*CCCLPN
Trigger: GTTTGGGAGGCAGCAACAGCAACGTGCCCAGGCAGG...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCCGAGGGAATGCCGCTTaGGGACGTCCTTGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGRGNAA*GRPWSA
Trigger: CGCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCG...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCCCGTCTCGCCCGGCATaGCGAGGGAATGCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGPSRPA*RGNAAW
Trigger: CCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGG...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATCCGTCTCGCCCGGCATaGCGAGGGAATGCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHPSRPA*RGNAAW
Trigger: CCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGG...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCCACTTGAGCACCCGCTaGTTGGTCCACACCACGGGG +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGHLSTR*LVHTTG
Trigger: CCCCGTGGTGTGGACCAACCAGCGGGTGCTCAAGTG...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCGCCTGTGGAGTTGGCTaGGTGGAAGACGGCGCTCAT +
Preference number: 4 (lower is better)
Translates to: SSPTPALSDVSARGSTSCACGVG*VEDGAH
Trigger: ATGAGCGCCGTCTTCCACCCAGCCAACTCCACAGGC...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCCTGGGTCTCTCACGTTaGGTCTGGTGGAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVLGLSR*VWWSHQ
Trigger: CTGGTGGCTCCACCAGACCCAACGTGAGAGACCCAG...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAAGGAGCCTGTGTATCCTaGATGGAGGCAGGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQGACVS*MEAGPD
Trigger: GTCCGGCCCTGCCTCCATCCAGGATACACAGGCTCC...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCCAGGTCAGAGGGGCCTaGATGCCCCTGGAGGGAACA +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGQVRGA*MPLEGT
Trigger: TGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACCTG...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCTCCGGTTGGTGGCCGTaGGTTCGGCTCGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGSGWWP*VRLAGW
Trigger: CCAACCTGCGAGCCGAACTCACGGCCACCAACCGGA...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCTCCCCAGCAGGATGCTaGCCTGGTGGAACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFSPAGC*PGGTSW
Trigger: CCAAGAAGTTCCACCAGGTCAGCATCCTGCTGGGGA...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCGGACCTCAGAGGACTTaGCGCCCTGCGACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGIGPQRT*RPATPP
Trigger: TGGAGGAGTCGCAGGGCGGCAAGTCCTCTGAGGTCC...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATAGCGGGAGGTCCGCCTaGACCACCCACTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHSGRSA*TTHSWL
Trigger: CAACCAGGAGTGGGTGGTGCAGGCGGACCTCCCGCT...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATGCACCCACGCTCGCTTaGACACACGCCCACACGCAC +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHAPTLA*THAHTH
Trigger: GTGCGTGTGGGCGTGTGTGCAAGCGAGCGTGGGTGC...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCCGGTGCAGGGAGCTaGACACCCCAAGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVAGAGS*TPQGPA
Trigger: AGCTGGGCCTTGGGGTGTGCAGCTCCCTGCACCGGC...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCTGGGCACGTTGCTGTTaGTGCCTCCCAAACGGCAGT +
Preference number: 4 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFWARCC*CLPNGS
Trigger: ACTGCCGTTTGGGAGGCAGCAACAGCAACGTGCCCA...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTGCGCCGCCACCCCGGTaGGGCGATGCAAAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCAPPPR*GDAKGA
Trigger: TGCCCCCTTTGCATCGCCGCACCGGGGTGGCGGCGC...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTCCTTCTGGGCCAGCTaGACCCTGAGCTCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHSFWAS*TLSSVA
Trigger: GGCCACCGAGCTCAGGGTCCAGCTGGCCCAGAAGGA...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCCGCGGCTCTCCAGTGTaGCATACAGCTGCTGCATCT +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVRGSPV*HTAAAS
Trigger: AGATGCAGCAGCTGTATGCCACACTGGAGAGCCGCG...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATCGCAGTGCCGTGGCGTaGTCTGTGGCCTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHRSAVA*SVASLA
Trigger: AGCCAAGGAGGCCACAGACCACGCCACGGCACTGCG...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCGGGAGCGCAGTGCCGTaGCGTGGTCTGTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSGSAVP*RGLWPP
Trigger: AGGAGGCCACAGACCACGCCACGGCACTGCGCTCCC...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAGGAGGGCTCAGGTGCTaGACTCTGTGTCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVGGLRC*TLCPHC
Trigger: ACAGTGGGGACACAGAGTCCAGCACCTGAGCCCTCC...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCCCAGAATGGGGAGGGTaGAGGGCTCAGGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGIPEWGG*RAQVLD
Trigger: GTCCAGCACCTGAGCCCTCCACCCTCCCCATTCTGG...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCACCAGCACAGCACCATaGACGCCGCTGTTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGTSTAP*TPLLVR
Trigger: CCTGACCAACAGCGGCGTCCATGGTGCTGTGCTGGT...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCACACCTGGGGCCATCTaGCTTCTCTTCCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFTPGAI*LLFLPG
Trigger: CCCAGGAAGGAAGAGAAGCCAGATGGCCCCAGGTGT...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCCAAGACAGGTGGGCTaGTGTCTTCTCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFPRQVG*CLLSPG
Trigger: CCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGG...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCCAATGCACTGGGCGCTaGGGTGTGGGGTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGQCTGR*GVGLGS
Trigger: GGACCCCAACCCCACACCCCAGCGCCCAGTGCATTG...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCCAGAGATTCACCATATaGGGCCGTCGGTCATCCCCG +
Preference number: 4 (lower is better)
Translates to: SSPTPALSDVSARGSTSCQRFTI*GRRSSP
Trigger: CGGGGATGACCGACGGCCCCATATGGTGAATCTCTG...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCCCTGTGGCACCAGGTTaGAGGGAGGTCTCACCTCTC +
Preference number: 4 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGPVAPG*REVSPL
Trigger: GAGAGGTGAGACCTCCCTCCAACCTGGTGCCACAGG...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCCCAGGTCATCCAGGCTaGATGTGGCTTGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: SSPTPALSDVSARGSTSCPGHPG*MWLGRD
Trigger: GTCTCTCCCAAGCCACATCCAGCCTGGATGACCTGG...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCCCAAACGGCAGTTTCTaGGGTCCCAGGTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVPNGSF*GPRSSR
Trigger: CCTGGATGACCTGGGACCCCAGAAACTGCCGTTTGG...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCCAAACGGCAGTTTCTaGGGTCCCAGGTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFPNGSF*GPRSSR
Trigger: CCTGGATGACCTGGGACCCCAGAAACTGCCGTTTGG...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCCTGGCTGTCAGGGATaGGGAGCCTCATGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFPGCQG*GASWVK
Trigger: TTTCACCCATGAGGCTCCCCATCCCTGACAGCCAGG...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATGGGCCAGCTGGACCCTaGGCTCGGTGGCCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDGPAGP*ARWPRG
Trigger: TCCTCTCGGCCACCGAGCTCAGGGTCCAGCTGGCCC...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATCCTTGGCCAGCGCTTTaGCCGCATCCTCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHPWPAL*PHPRSP
Trigger: AGGAGAGCGAGGATGCGGTCAAAGCGCTGGCCAAGG...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATCAGATGCGTCGGAGATaGCAGAGGGCTGCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHQMRRR*QRAAGS
Trigger: ACTCCCGGCAGCCCTCTGTCATCTCCGACGCATCTG...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCGCCTTGGCCACCCAGTaGTGGTCCAGCTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSALATQ*WSSSAA
Trigger: AGCTGCCGAGCTGGACCATCACTGGGTGGCCAAGGC...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCTCAACCAGGTGGTTCTaGAAGGCCTGGGAGTACTGG +
Preference number: 4 (lower is better)
Translates to: SSPTPALSDVSARGSTSCSTRWF*KAWEYW
Trigger: CCAGTACTCCCAGGCCTTTCAGAACCACCTGGTTGA...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCGGAGGGCCTCCCTGCTaGAGTTCACTTGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGGGPPC*SSLGTA
Trigger: TGCTGTACCAAGTGAACTTCAGCAGGGAGGCCCTCC...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCTGGGGGTCAGAAAGCTaGGAGTCTACCAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGWGSES*ESTRQV
Trigger: CACCTGCCTGGTAGACTCTCAGCTTTCTGACCCCCA...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCCCCAGCCCTGTTCAGTaGCGTCAAGCTTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGPSPVQ*RQAFGS
Trigger: GGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGG...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATGCCTTCGGCGGCAGATaGGTCGGAGATGACAGAGGG +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHAFGGR*VGDDRG
Trigger: CCCTCTGTCATCTCCGACGCATCTGCCGCCGAAGGC...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATCGGGACTGTCGCCGTTaGAGAGGGAGTGTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHRDCRR*RGSVSG
Trigger: ACCGGACACACTCCCTCTGCAACGGCGACAGTCCCG...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTATCCCCTAACAACACCTaGCTGGCCCACCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVSPNNT*LAHLHP
Trigger: AGGATGCAGGTGGGCCAGGCAGGTGTTGTTAGGGGA...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCGTTCTCCTCCTTTCCTaGCCGCGTGACGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGVLLLS*PRDAGG
Trigger: GCCTCCAGCGTCACGCGGGCAGGAAAGGAGGAGAAC...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCGCTAAGCCCCACTCCTaGACGGATCATTCACCGGCT +
Preference number: 4 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGAKPHS*TDHSPA
Trigger: AGCCGGTGAATGATCCGTGCAGGAGTGGGGCTTAGC...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCGTGGGAATAACTGCCTaGCTGGGCACGTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVVGITA*LGTLLL
Trigger: CAACAGCAACGTGCCCAGGCAGGCAGTTATTCCCAC...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCGGCCTGCTGGCCTCCTaGTGTGAACATTTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVGLLAS*CEHFGQ
Trigger: TTGCCCAAAATGTTCACAGCAGGAGGCCAGCAGGCC...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATCGAGGGAATGCCGCTTaGGGACGTCCTTGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHRGNAA*GRPWSA
Trigger: CGCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCG...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTATGCACCACCCACTCCTaGTTGCCATTGAGCACCGTC +
Preference number: 4 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVCTTHS*LPLSTV
Trigger: GACGGTGCTCAATGGCAACCAGGAGTGGGTGGTGCA...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAATGCACCACCCACTCCTaGTTGCCATTGAGCACCGTC +
Preference number: 4 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQCTTHS*LPLSTV
Trigger: GACGGTGCTCAATGGCAACCAGGAGTGGGTGGTGCA...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTGTTGACTCTGCCGGATaGCTGCGGTCAGCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCVDSAG*LRSAGG
Trigger: ACCTCCCGCTGACCGCAGCCATCCGGCAGAGTCAAC...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTCCGCTGCTTCCCTCTaGCGAAGACGCGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHSAASL*RRRGRW
Trigger: CCATCTCCCGCGTCTTCGCCAGAGGGAAGCAGCGGA...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAGTGGTTAAAGTGACTTaGGCGCACCCCCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVVVKVT*AHPQDR
Trigger: CCTGTCCTGGGGGTGCGCCCAAGTCACTTTAACCAC...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAAGGCCAGGGTCCCACTaGTCGTACCCTTGGATGTGT +
Preference number: 4 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVRPGSH*SYPWMC
Trigger: ACACATCCAAGGGTACGACCAGTGGGACCCTGGCCT...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTACACGGTAGTCCTCGATaGCCAGGCGCAGCTTGCGCC +
Preference number: 4 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVHGSPR*PGAACA
Trigger: GGCGCAAGCTGCGCCTGGCCATCGAGGACTACCGTG...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCTGTTCCAGCCTGCTCTaGGGGTCATCGTCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGCSSLL*GSSSPQ
Trigger: TTGCGGAGACGATGACCCCCAGAGCAGGCTGGAACA...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCTTGCCTCAGGCCTGCTaGCCTCCTGCTGTGAACATT +
Preference number: 4 (lower is better)
Translates to: SSPTPALSDVSARGSTSCLPQAC*PPAVNI
Trigger: AATGTTCACAGCAGGAGGCCAGCAGGCCTGAGGCAA...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCCTCCAAATGCTCACCTaGCTGTCAGGGATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGLQMLT*LSGMGS
Trigger: GCTCCCCATCCCTGACAGCCAGGTGAGCATTTGGAG...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 72 bp CGCTGTGGAGCTGAAACCGCAGAGTCCATCGGGATTTaGCCCAGGAGCAAGGGACATCCTCAGCCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: RCGAETAESIGI*PRSKGHPQPAA
Trigger: GGCCGCAGGCTGAGGATGTCCCTTGCTCCTGGGCAAAATCCCGATGGACTCTGCGGTTTCAGCTCCACAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 72 bp GTGCATCCACATCGTCCCCAGGTCCAGATGCCCACATaGCCCTGCAGGGACCAAGACCACACTCGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VHPHRPQVQMPT*PCRDQDHTRAA
Trigger: AGCAGCCCGAGTGTGGTCTTGGTCCCTGCAGGGCAATGTGGGCATCTGGACCTGGGGACGATGTGGATGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAGCTCATAGTTGCGGATaGAGTCTCGGAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVAHSCG*SLGAAP
Trigger: AGGAGCAGCTCCGAGACTTCATCCGCAACTATGAGC...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCCCTTGGCCAGCGCTTTaGCCGCATCCTCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSPWPAL*PHPRSP
Trigger: AGGAGAGCGAGGATGCGGTCAAAGCGCTGGCCAAGG...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATAGGCTCAGGCTGCTGTaGCAAGTTGGGGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHRLRLL*QVGGRS
Trigger: ACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCT...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTACAGTTCCTTTGCTGGTaGAGCCTCTTTGGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVQFLCW*SLFGAN
Trigger: GTTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTG...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCCCAAGAGAGATTCAGTaGGCCAAGTCAGGACCCAAG +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVPREIQ*AKSGPK
Trigger: CTTGGGTCCTGACTTGGCTCACTGAATCTCTCTTGG...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCGCTGGCCTCCTGCTGTaGACATTTTGGGCAATACTG +
Preference number: 4 (lower is better)
Translates to: SSPTPALSDVSARGSTSCAGLLL*TFWAIL
Trigger: CAGTATTGCCCAAAATGTTCACAGCAGGAGGCCAGC...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCGCCGCGTCCACGCACTaGTCGCAGGCTGCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFAASTH*SQAAGP
Trigger: GGGACCCGCAGCCTGCGAGCAGTGCGTGGACGCGGC...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361144.9
CDS-3UTR GCA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCGTGGCATACAGCTGCTaGATCTGGCTCACCAGGTCT +
Preference number: 4 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGVAYSC*IWLTRS
Trigger: AGACCTGGTGAGCCAGATGCAGCAGCTGTATGCCAC...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAGTGTGGCATACAGCTaGTGCATCTGGCTCACCAGG +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGSVAYS*CIWLTR
Trigger: CCTGGTGAGCCAGATGCAGCAGCTGTATGCCACACT...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTCAGCTGGGAGCGCAGTaGCGTGGCGTGGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCQLGAQ*RGVVCG
Trigger: GCCACAGACCACGCCACGGCACTGCGCTCCCAGCTG...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCTCGAGGGACTTCCGCTaGTTCCCTCTGGCGAAGACG +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGSRDFR*FPLAKT
Trigger: CGTCTTCGCCAGAGGGAAGCAGCGGAAGTCCCTCGA...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTGACAGGCTGAGGCTCTaGCGCGTGGGGCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCDRLRL*RVGLHW
Trigger: CCAGTGCAGCCCCACGCGGCAGAGCCTCAGCCTGTC...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGGCCGGTGCAGGGAGCTaGACACCCCAAGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKAGAGS*TPQGPA
Trigger: AGCTGGGCCTTGGGGTGTGCAGCTCCCTGCACCGGC...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCCAGCTTGAGTCTCTCTaGCAAGTCTCCGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVQLESL*QVSAFC
Trigger: ACAGAAGGCGGAGACTTGGCAGAGAGACTCAAGCTG...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAAGGAGGGACTGAGACCTaGTGCAGCGGCCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LSCGLQLQDPMDEAECHEGGTET*CSGPQP
Trigger: GGGCTGGGGGCCGCTGCAGCAGGTCTCAGTCCCTCC...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR GCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCAAGGGTGGCTGGAACTTaGCCCCCGGCCCGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPRVAGT*PPARGC
Trigger: GCAGCCCCGGGCCGGGGGGCAAGTTCCAGCCACCCT...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CCA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGTCCTTCTGGGCCAGCTaGACCCTGAGCTCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKSFWAS*TLSSVA
Trigger: GGCCACCGAGCTCAGGGTCCAGCTGGCCCAGAAGGA...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGGTGGCCTCCTTGGCTTaGCGCCGCAGCTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKVASLA*RRSSHF
Trigger: GAAGTGGGAGCTGCGGCGCCAAGCCAAGGAGGCCAC...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATGGGAGCGCAGTGCCGTaGCGTGGTCTGTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDGSAVP*RGLWPP
Trigger: AGGAGGCCACAGACCACGCCACGGCACTGCGCTCCC...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGTCCTTGAGGTCCAGCTaGGAGCGCAGTGCCGTGGCG +
Preference number: 4 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKSLRSS*ERSAVA
Trigger: CGCCACGGCACTGCGCTCCCAGCTGGACCTCAAGGA...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTCCGTCTCGCCCGGCATaGCGAGGGAATGCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCPSRPA*RGNAAW
Trigger: CCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGG...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCCAGGTTCTTCTGAACTaGGCCGGGACTGTCGCCGTT +
Preference number: 4 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGIQVLLN*AGTVAV
Trigger: AACGGCGACAGTCCCGGCCCAGTTCAGAAGAACCTG...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCTCCGCTGCTTCCCTCTaGCGAAGACGCGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSSAASL*RRRGRW
Trigger: CCATCTCCCGCGTCTTCGCCAGAGGGAAGCAGCGGA...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCTGAAGTTCACTTaGTACAGCAGCTCGATCCCC +
Preference number: 4 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFLLKFT*YSSSIP
Trigger: GGGGATCGAGCTGCTGTACCAAGTGAACTTCAGCAG...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCCTGCTGAAGTTCACTTaGTACAGCAGCTCGATCCCC +
Preference number: 4 (lower is better)
Translates to: SSPTPALSDVSARGSTSCLLKFT*YSSSIP
Trigger: GGGGATCGAGCTGCTGTACCAAGTGAACTTCAGCAG...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCACGGGCCCGGCGCTCCTaGAGGGCCTCCCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPRARRS*RASLLK
Trigger: CTTCAGCAGGGAGGCCCTCCAGGAGCGCCGGGCCCG...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCGGATGTGCTTCCCACTaGGGATGCCCAGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSGCASH*GCPGQW
Trigger: CCACTGCCCTGGGCATCCCCAGTGGGAAGCACATCC...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCTCACGTTGGGTCTGGTaGAGCCACCAGTTCCTTACA +
Preference number: 4 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFSRWVW*SHQFLT
Trigger: TGTAAGGAACTGGTGGCTCCACCAGACCCAACGTGA...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCGTCCAGATTGTTGTGTaGCTTCTCCCCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVVQIVV*LLPSSA
Trigger: TGCAGAGGAGGGGAGAAGCCACACAACAATCTGGAC...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATTTTGGGTCCCTGTCCTaGGGCCCTCCACGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDFGSLS*GPPRWP
Trigger: CGGCCAGCGTGGAGGGCCCCAGGACAGGGACCCAAA...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCGTGACGTCAAGCTTTTaGGTCCCTGTCCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGVTSSF*VPVLGP
Trigger: GGGCCCCAGGACAGGGACCCAAAAGCTTGACGTCAC...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTTTGTGCAGGTTCTTCTaGACTGGGCCGGGACTGTCG +
Preference number: 4 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCLCRFF*TGPGLS
Trigger: CGACAGTCCCGGCCCAGTTCAGAAGAACCTGCACAA...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCCAGTTCCTTTGCTGGTaGAGCCTCTTTGGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGIQFLCW*SLFGAN
Trigger: GTTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTG...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTACCATGGCCTCGGCATTaGATGTGGGCTCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVPWPRH*MWAPAP
Trigger: TGGTGCTGGAGCCCACATTCAATGCCGAGGCCATGG...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCCCACGGTCTTCGGCATaGGAGAGGTGTAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: SSPTPALSDVSARGSTSCPRSSA*ERCNSQ
Trigger: TTGAGAATTACACCTCTCTCATGCCGAAGACCGTGG...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCAGGAACTGCAGATCTaGGGCTACTTGTCACTTCCA +
Preference number: 4 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFQELQI*GYLSLP
Trigger: TGGAAGTGACAAGTAGCCTCAGATCTGCAGTTCCTG...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR GCA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCTCAGCTTTCATGGCCTaGAAGGCTTCTTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFSAFMA*KASLAL
Trigger: CAGAGCCAAAGAAGCCTTGCAGGCCATGAAAGCTGA...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCCATCCTCGCTCTCCTTaGGGTGCTGCTCATAGTTGC +
Preference number: 4 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGIHPRSP*GAAHSC
Trigger: GCAACTATGAGCAGCACCGCAAGGAGAGCGAGGATG...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTCAGCTGGGAGCGCAGTaGCGTGGCGTGGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVAQLGAQ*RGVVCG
Trigger: GCCACAGACCACGCCACGGCACTGCGCTCCCAGCTG...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGGGCATGGCGAGGGAATaGCGCTTGGGGACGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKGMARE*RLGTSL
Trigger: CAAGGACGTCCCCAAGCGGCATTCCCTCGCCATGCC...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGCGGGACTGTCGCCGTTaGAGAGGGAGTGTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKRDCRR*RGSVSG
Trigger: ACCGGACACACTCCCTCTGCAACGGCGACAGTCCCG...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATACAGACCACATCCTCTaGCAGACGGGCTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHTDHIL*QTGSRS
Trigger: ACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTCTGT...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTGCTTCCCACTGGGGATaGCCAGGGCAGTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCASHWG*PGQWPW
Trigger: CCATGGCCACTGCCCTGGGCATCCCCAGTGGGAAGC...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCCAGGGACTGCTTGGCTaGTCCACAGTGACGGTCACT +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGQGLLG*STVTVT
Trigger: AGTGACCGTCACTGTGGAGCAGCCAAGCAGTCCCTG...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCCAGCTTTCCAAGAAGTaGATCCACATCGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGQLSKK*IHIVPR
Trigger: CCTGGGGACGATGTGGATGCACTTCTTGGAAAGCTG...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCGAGTGGAAGTGGTGGTaGCCAGGACGCATGGGCTCT +
Preference number: 4 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSEWKWW*PGRMGS
Trigger: AGAGCCCATGCGTCCTGGGCACCACCACTTCCACTC...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTCAGGCGTCCGGCTGCTaGCAAAGGGAGAGCGCGGGA +
Preference number: 4 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVAQASGC*QRESAG
Trigger: TCCCGCGCTCTCCCTTTGGCAGCAGCCGGACGCCTG...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATCGCGGCTCTCCAGTGTaGCATACAGCTGCTGCATCT +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHRGSPV*HTAAAS
Trigger: AGATGCAGCAGCTGTATGCCACACTGGAGAGCCGCG...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAACCGTGGCGTGGTCTGTaGCCTCCTTGGCTTGGCGCC +
Preference number: 4 (lower is better)
Translates to: LSCGLQLQDPMDEAECHEPWRGL*PPWLGA
Trigger: GGCGCCAAGCCAAGGAGGCCACAGACCACGCCACGG...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATTCCTTGAGGTCCAGCTaGGAGCGCAGTGCCGTGGCG +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDSLRSS*ERSAVA
Trigger: CGCCACGGCACTGCGCTCCCAGCTGGACCTCAAGGA...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTGCACCACCCACTCCTaGTTGCCATTGAGCACCGTC +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHCTTHS*LPLSTV
Trigger: GACGGTGCTCAATGGCAACCAGGAGTGGGTGGTGCA...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCGAGGGCTGCCGGGAGTaGCAGGGGCTCACCCTGACC +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFEGCRE*QGLTLT
Trigger: GGTCAGGGTGAGCCCCTGCCACTCCCGGCAGCCCTC...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCCAGGTTCTTCTGAACTaGGCCGGGACTGTCGCCGTT +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGQVLLN*AGTVAV
Trigger: AACGGCGACAGTCCCGGCCCAGTTCAGAAGAACCTG...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCCATCAATTACAGAGGTaGCGACGCAGGGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGIHQLQR*RRRGER
Trigger: CCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATG...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTAGGAACAGAAGCTGCTaGAGGCCCCTCGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCRNRSC*RPLGEQ
Trigger: CTGTTCTCCGAGGGGCCTCCAGCAGCTTCTGTTCCT...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTTCCTGGCTGGCCGACTaGACCGCCCCATCGATGCGG +
Preference number: 4 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVASWLAD*TAPSMR
Trigger: CCGCATCGATGGGGCGGTCCAGTCGGCCAGCCAGGA...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATGTTCGGCTCGCAGGTTaGTCACCTCCTGGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDVRLAG*SPPGWP
Trigger: CGGCCAGCCAGGAGGTGACCAACCTGCGAGCCGAAC...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTACGCGTGGGGCTGCACTaGCTGTCCGAGTCATCAAAG +
Preference number: 4 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVRVGLH*LSESSK
Trigger: CTTTGATGACTCGGACAGCCAGTGCAGCCCCACGCG...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCCCAAGACAGGTGGGCTaGTGTCTTCTCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGPRQVG*CLLSPG
Trigger: CCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGG...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGGCCTCCTCCCACCTTaGCAGCTCCGTTTAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVGLLPP*QLRLRL
Trigger: GAGCCTTAAACGGAGCTGCCAAGGTGGGAGGAGGCC...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCTTTCTTGAGCCCTGTTaGAGGCTCTTGGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGFLEPC*RLLAGL
Trigger: CAGACCTGCCAAGAGCCTCCAACAGGGCTCAAGAAA...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAACCAGCGTGGATTCCATaGCTCTTTTGGGGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQPAWIP*LFWGLW
Trigger: CCAAAGACCCCAAAAGAGCCATGGAATCCACGCTGG...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR TCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACGGGCCAGCTGGACCCTaGGCTCGGTGGCCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHGPAGP*ARWPRG
Trigger: TCCTCTCGGCCACCGAGCTCAGGGTCCAGCTGGCCC...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATCAGATGCGTCGGAGATaGCAGAGGGCTGCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDQMRRR*QRAAGS
Trigger: ACTCCCGGCAGCCCTCTGTCATCTCCGACGCATCTG...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATGGTGTCGAGGGGAGTTaGTGTCGCTCGGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDGVEGS*CRSVWT
Trigger: CGTCCACACCGAGCGACATCAACTCCCCTCGACACC...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATGTTTTGTGGTTAAAGTaGCTTGGGCGCACCCCCAGG +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHVLWLK*LGRTPR
Trigger: CCTGGGGGTGCGCCCAAGTCACTTTAACCACAAAAC...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACCCTTTCCTGCCCGCGTaGCGCTGGAGGCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHPFLPA*RWRPCQ
Trigger: CTGGCAGGGCCTCCAGCGTCACGCGGGCAGGAAAGG...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTACTGCAGCCTGGGGTCTaGAAACAGCGATGCCAACAG +
Preference number: 4 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVLQPGV*KQRCQQ
Trigger: CTGTTGGCATCGCTGTTTTCAGACCCCAGGCTGCAG...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTACCCAGCCCTGTTCAGTaGCGTCAAGCTTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVPSPVQ*RQAFGS
Trigger: GGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGG...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCGGGAAATCTGGTCATTaGGGGTGTGCAATGATTGCA +
Preference number: 4 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFGKSGH*GCAMIA
Trigger: TGCAATCATTGCACACCCTCAATGACCAGATTTCCC...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR GCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATGGCATGGCGAGGGAATaGCGCTTGGGGACGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDGMARE*RLGTSL
Trigger: CAAGGACGTCCCCAAGCGGCATTCCCTCGCCATGCC...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp ATGTACATCAATTACAGAGGTGGCGACGCAGGGGAGAGAGGTTCACACTCGTGTACTCTGCCGGATGGCTaGGGTCAGCGGGAGGTCCGC +
Preference number: 4 (lower is better)
Translates to: MYINYRGGDAGERGSHSCTLPDG*GQREVR
Trigger: GCGGACCTCCCGCTGACCGCAGCCATCCGGCAGAGT...ACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACACTCTGCCGGATGGCTaGGGTCAGCGGGAGGTCCGC +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDTLPDG*GQREVR
Trigger: GCGGACCTCCCGCTGACCGCAGCCATCCGGCAGAGT...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCGTGCCAGCGCACACGTaGACACGCACCCCACGCACG +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFVPAHT*TRTPRT
Trigger: CGTGCGTGGGGTGCGTGTGCACGTGTGCGCTGGCAC...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGGGGAGGAACAGAAGCTaGTGGAGGCCCCTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKGRNRS*WRPLGE
Trigger: TTCTCCGAGGGGCCTCCAGCAGCTTCTGTTCCTCCC...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGGGACCGCCCCATCGATaGGGAGCGCGAGCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKGPPHR*GARAAY
Trigger: ATAAGCAGCTCGCGCTCCGCATCGATGGGGCGGTCC...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTTGCAGCCGGTCCATCTaGTCCTCGCCTTCCGACAGG +
Preference number: 4 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCCSRSI*SSPSDR
Trigger: CCTGTCGGAAGGCGAGGAGCAGATGGACCGGCTGCA...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAAGCTTCCCACTGGGGATaGCCAGGGCAGTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: LSCGLQLQDPMDEAECHEASHWG*PGQWPW
Trigger: CCATGGCCACTGCCCTGGGCATCCCCAGTGGGAAGC...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCCTCTGTGGGAATAACTaGCTGCCTGGGCACGTTGCT +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGLCGNN*LPGHVA
Trigger: AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAG...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCTCCAGATGCCCACATTaGCCTGCAGGGACCAAGACC +
Preference number: 4 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSSRCPH*PAGTKT
Trigger: GGTCTTGGTCCCTGCAGGGCAATGTGGGCATCTGGA...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCAGTCTACCAGGCAGGTaGCTTCTCCACCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSSLPGR*LLHPQA
Trigger: TGCCTGTGGGTGGAGAAGGCACCTGCCTGGTAGACT...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCAGCCATTGGCAAGAATaGCAGACTCAGAGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGSHWQE*QTQRLP
Trigger: TGGCAACCTCTGAGTCTGGCATTCTTGCCAATGGCT...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAATCTGCAGCCACAAAATaGCTTTGTGTGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQSAATK*LCVSGL
Trigger: GAGCCCTGACACACAAAGGCATTTTGTGGCTGCAGA...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCCACGGCCCTAGAAACTaGATCTTTGTTCAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: SSPTPALSDVSARGSTSCHGPRN*IFVQSQ
Trigger: TTGGCTCTGAACAAAGATGCAGTTTCTAGGGCCGTG...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCCGCCAGGCGTCCGGCTaGTGCCAAAGGGAGAGCGCG +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSRQASG*CQRESA
Trigger: CGCGCTCTCCCTTTGGCAGCAGCCGGACGCCTGGCG...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR GCA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAATGTTCCAGCACCAGCTaGCGGCAGAGCGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LSCGLQLQDPMDEAECHECSSTS*RQSAAQ
Trigger: CTGGGCAGCGCTCTGCCGGCAGCTGGTGCTGGAACA...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CCA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCAGGCTTCTTTGGCTCTaGCTAGCTCCTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGIRLLWL*LAPAPS
Trigger: AGAAGGAGCAGGAGCTAGCCAGAGCCAAAGAAGCCT...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAAGTGGCCTCCTTGGCTTaGCGCCGCAGCTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: LSCGLQLQDPMDEAECHEVASLA*RRSSHF
Trigger: GAAGTGGGAGCTGCGGCGCCAAGCCAAGGAGGCCAC...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCGGTCTGTGGCCTCCTTaGCTTGGCGCCGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GSANSSSIRPPPCVTELFGLWPP*LGAAAP
Trigger: GGGAGCTGCGGCGCCAAGCCAAGGAGGCCACAGACC...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCCCGTGGCGTGGTCTGTaGCCTCCTTGGCTTGGCGCC +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFPWRGL*PPWLGA
Trigger: GGCGCCAAGCCAAGGAGGCCACAGACCACGCCACGG...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACCCGTGGCGTGGTCTGTaGCCTCCTTGGCTTGGCGCC +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDPWRGL*PPWLGA
Trigger: GGCGCCAAGCCAAGGAGGCCACAGACCACGCCACGG...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCGGGAGCGCAGTGCCGTaGCGTGGTCTGTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFGSAVP*RGLWPP
Trigger: AGGAGGCCACAGACCACGCCACGGCACTGCGCTCCC...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp ATGTACATCAATTACAGAGGTGGCGACGCAGGGGAGAGAGGTTCACACTCGTGTGGGAGCGCAGTGCCGTaGCGTGGTCTGTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: MYINYRGGDAGERGSHSCGSAVP*RGLWPP
Trigger: AGGAGGCCACAGACCACGCCACGGCACTGCGCTCCC...ACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCCCGTCTCGCCCGGCATaGCGAGGGAATGCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFPSRPA*RGNAAW
Trigger: CCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGG...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTACAGGTTCTTCTGAACTaGGCCGGGACTGTCGCCGTT +
Preference number: 4 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVQVLLN*AGTVAV
Trigger: AACGGCGACAGTCCCGGCCCAGTTCAGAAGAACCTG...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTCGAAGACGCGGGAGATaGAGCCGAATCCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCRRRGR*SRIPSS
Trigger: AGAAGATGGGATTCGGCTCCATCTCCCGCGTCTTCG...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGTCCGCTGCTTCCCTCTaGCGAAGACGCGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKSAASL*RRRGRW
Trigger: CCATCTCCCGCGTCTTCGCCAGAGGGAAGCAGCGGA...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAAGCTTTGAAATCCAATaGTCCCTGGGTTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVSFEIQ*SLGSGH
Trigger: GTGGCCAGAACCCAGGGACCATTGGATTTCAAAGCT...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAGGATCCTTTCATGCATaGGCAGGAGAATGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVGSFHA*AGEWER
Trigger: TCTCTCCCATTCTCCTGCCCATGCATGAAAGGATCC...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTTGGTCACCTCCTGGCTaGCCGACTGGACCGCCCCAT +
Preference number: 4 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVAWSPPG*PTGPPH
Trigger: ATGGGGCGGTCCAGTCGGCCAGCCAGGAGGTGACCA...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCACCTCCAGCCAGGCCTaGACGGTGCCCGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GSANSSSIRPPPCVTELFTSSQA*TVPAFQ
Trigger: CTGGAAGGCGGGCACCGTCCAGGCCTGGCTGGAGGT...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTCGGGCCCGGCGCTCCTaGAGGGCCTCCCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLRARRS*RASLLK
Trigger: CTTCAGCAGGGAGGCCCTCCAGGAGCGCCGGGCCCG...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTGGATGCCTGTGGAGTTaGCTGGGTGGAAGACGGCGC +
Preference number: 4 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCGCLWS*LGGRRR
Trigger: GCGCCGTCTTCCACCCAGCCAACTCCACAGGCATCC...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGGCTCTGCCAATGCACTaGGCGCTGGGGTGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKALPMH*ALGCGV
Trigger: AACCCCACACCCCAGCGCCCAGTGCATTGGCAGAGC...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCCATCTCCTAGAAATGTaGCTGCTAAGCCCCACTCCT +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGHLLEM*LLSPTP
Trigger: AGGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATG...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCCTCCTTTCTGAGCTGTaGACTGCAGCTTCAGGACCC +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGLLSEL*TAASGP
Trigger: GGGTCCTGAAGCTGCAGTCCACAGCTCAGAAAGGAG...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCCACACTCGGGCTGCTTaGACAGGATGTAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGHTRAA*TGCSWS
Trigger: TGACCAGCTACATCCTGTCCAAGCAGCCCGAGTGTG...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCCCCTCCTCTGCAGCCTaGGGTCTGAAAACAGCGATG +
Preference number: 4 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSPSSAA*GLKTAM
Trigger: CATCGCTGTTTTCAGACCCCAGGCTGCAGAGGAGGG...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGGGTGCCCAGGACGCATaGGCTCTGATGGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKGAQDA*ALMGRG
Trigger: CCCTCTTCCCATCAGAGCCCATGCGTCCTGGGCACC...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAAAGACGACAGAGAGTTaGCAGGTTCACACACGGTTT +
Preference number: 4 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVKTTES*QVHTRF
Trigger: AAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCTT...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTAGCCGGTTTGACCTCTaGCAAACCCAGCCAAGACAA +
Preference number: 4 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCSRFDL*QTQPRQ
Trigger: TTGTCTTGGCTGGGTTTGTCAGAGGTCAAACCGGCT...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTTCCGGTTGGTGGCCGTaGGTTCGGCTCGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPSGWWP*VRLAGW
Trigger: CCAACCTGCGAGCCGAACTCACGGCCACCAACCGGA...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCTTCCTTACACGTTGGTaGCCTCCAGGCTGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGFLTRW*PPGCCS
Trigger: GCTACAACAGCCTGGAGGTCACCAACGTGTAAGGAA...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTTGGGCGCTGTGGAGCTaGAACCGCAGAGTCCATCGG +
Preference number: 4 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVAWALWS*NRRVHR
Trigger: CCGATGGACTCTGCGGTTTCAGCTCCACAGCGCCCA...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACCAGGGCCGGACACTGTaGCAGGTCCTCTGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDQGRTL*QVLWAH
Trigger: ATGGGCCCAGAGGACCTGTCACAGTGTCCGGCCCTG...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCCACCTATGTTTCAGGTaGCAGGGACATCACAACAAA +
Preference number: 4 (lower is better)
Translates to: SSPTPALSDVSARGSTSCHLCFR*QGHHNK
Trigger: TTTGTTGTGATGTCCCTGTCACCTGAAACATAGGTG...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTCGAGGCACAGAGAGGTaGGGCCACTGGGAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVARGTER*GHWEEA
Trigger: GGCTTCTTCCCAGTGGCCTCACCTCTCTGTGCCTCG...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCCAGAAGTATCGTAGATaGAGACATCGAGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGQKYRR*RHRGTE
Trigger: CTCTGTGCCTCGATGTCTTCATCTACGATACTTCTG...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCAACAATTTGCCAGGTTaGAGAACACACGCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVNNLPG*RTHALR
Trigger: CCTCAAAGCGTGTGTTCTTCAACCTGGCAAATTGTT...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAACCCATCCTCATGTTaGGAAACCAGCTCCAAATGC +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGNPSSC*ETSSKC
Trigger: GCATTTGGAGCTGGTTTCTCAACATGAGGATGGGTT...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCTCTTCTTGCCGACCTTaGAGCAGAGTTGACGTTTCA +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGSSCRP*SRVDVS
Trigger: TGAAACGTCAACTCTGCTTCAAGGTCGGCAAGAAGA...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTAGAGGGAGGTGGGCCTaGGCATGGGCCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVARGRWA*AWAFFS
Trigger: GGAGAAGAAGGCCCATGCTCAGGCCCACCTCCCTCT...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGACGGGCGGTCCGCGCCTaGTGCACGCGAGGAATTCGG +
Preference number: 4 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRRAVRA*CTRGIR
Trigger: CCGAATTCCTCGCGTGCAGCAGGCGCGGACCGCCCG...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361144.9
CDS-3UTR GCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCCATCCTCGCTCTCCTTaGGGTGCTGCTCATAGTTGC +
Preference number: 4 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSHPRSP*GAAHSC
Trigger: GCAACTATGAGCAGCACCGCAAGGAGAGCGAGGATG...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGCAGCTGGGAGCGCAGTaGCGTGGCGTGGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWQLGAQ*RGVVCG
Trigger: GCCACAGACCACGCCACGGCACTGCGCTCCCAGCTG...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCAGCGGGAGGTCCGCCTaGACCACCCACTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFSGRSA*TTHSWL
Trigger: CAACCAGGAGTGGGTGGTGCAGGCGGACCTCCCGCT...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAAACGCACAGACACGCCTaGGGGCAGCAGGCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQTHRHA*GQQAQG
Trigger: CCCCTGCGCCTGCTGCCCGCAGGCGTGTCTGTGCGT...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTTGTGGCAGGCTGTCTTaGCCTGAACTCAACCTCTCT +
Preference number: 4 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCCGRLS*PELNLS
Trigger: AGAGAGGTTGAGTTCAGGGCAAGACAGCCTGCCACA...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCGCCAGGCCTGGACGGTaGCCGCCTTCCAGTGGGACA +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSARPGR*PPSSGT
Trigger: TGTCCCACTGGAAGGCGGGCACCGTCCAGGCCTGGC...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAAACCCCAAGGCCCAGCTaGAGGTCCTCGTCACTCAGG +
Preference number: 4 (lower is better)
Translates to: LSCGLQLQDPMDEAECHETPRPS*RSSSLR
Trigger: CCTGAGTGACGAGGACCTGCAGCTGGGCCTTGGGGT...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACGGACAGGCTGCGGCCTaGCTCGGCATCACGGTAGTC +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDGQAAA*LGITVV
Trigger: GACTACCGTGATGCCGAGGCAGGCCGCAGCCTGTCC...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACTCCTGCACCCGGCTCTaGCAATGCACTGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHSCTRL*QCTGRW
Trigger: CCAGCGCCCAGTGCATTGGCAGAGCCGGGTGCAGGA...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTAGAGGCATTCGCGGTTaGCCGTGTTGCCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCRGIRG*PCCLRP
Trigger: AGGCCTGAGGCAACACGGGCAACCGCGAATGCCTCT...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGCGCAGGAGCACGGGCTaGCTGCAGTCGCCATCCGCT +
Preference number: 4 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWRRSTG*LQSPSA
Trigger: AGCGGATGGCGACTGCAGCCAGCCCGTGCTCCTGCG...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361144.9
CDS-3UTR CCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTACAGCTGCTGCATCTaGCTCACCAGGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHYSCCI*LTRSVF
Trigger: GAAGACAGACCTGGTGAGCCAGATGCAGCAGCTGTA...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp ATGTACATCAATTACAGAGGTGGCGACGCAGGGGAGAGAGGTTCACACTCGTGTGTGGCCTCCTTGGCTTaGCGCCGCAGCTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: MYINYRGGDAGERGSHSCVASLA*RRSSHF
Trigger: GAAGTGGGAGCTGCGGCGCCAAGCCAAGGAGGCCAC...ACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGTCTGTGGCCTCCTTaGCTTGGCGCCGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWGLWPP*LGAAAP
Trigger: GGGAGCTGCGGCGCCAAGCCAAGGAGGCCACAGACC...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACCGCAGTGCCGTGGCGTaGTCTGTGGCCTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDRSAVA*SVASLA
Trigger: AGCCAAGGAGGCCACAGACCACGCCACGGCACTGCG...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGAGGACTGTTTGGCCATaGCCAGCTCGGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKRTVWP*PARPPA
Trigger: AGCTGGAGGCCGAGCTGGCCATGGCCAAACAGTCCT...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCCCAGGAGTAGCGGTTTaGACGAGGGACATTTACAAG +
Preference number: 4 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGIPGVAV*TRDIYK
Trigger: CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGG...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGAGGCCAGGGTCCCACTaGTCGTACCCTTGGATGTGT +
Preference number: 4 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKRPGSH*SYPWMC
Trigger: ACACATCCAAGGGTACGACCAGTGGGACCCTGGCCT...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATCTAACAACACCTGCCTaGCCCACCTGCATCCTAAAC +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHLTTPA*PTCILN
Trigger: GTTTAGGATGCAGGTGGGCCAGGCAGGTGTTGTTAG...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATGCCCTCCTTTTGAAGTaGGTGCCTCCCCTAACAACA +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHALLLK*VPPLTT
Trigger: TGTTGTTAGGGGAGGCACCCACTTCAAAAGGAGGGC...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAGGTTGGTCACCTCCTaGCTGGCCGACTGGACCGCC +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDRLVTS*LADWTA
Trigger: GGCGGTCCAGTCGGCCAGCCAGGAGGTGACCAACCT...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCACGGTAGTCCTCGATaGCCAGGCGCAGCTTGCGCC +
Preference number: 4 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPHGSPR*PGAACA
Trigger: GGCGCAAGCTGCGCCTGGCCATCGAGGACTACCGTG...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCACCAGCTCGGCAGCTTTaGACAGGCTGCGGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPPARQL*TGCGLP
Trigger: AGGCAGGCCGCAGCCTGTCCAAAGCTGCCGAGCTGG...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACCCAGCTCGGCAGCTTTaGACAGGCTGCGGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHPARQL*TGCGLP
Trigger: AGGCAGGCCGCAGCCTGTCCAAAGCTGCCGAGCTGG...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCAGTGAGAACGACACCTaGGGCCATCTGGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGSENDT*GHLASL
Trigger: AAGAGAAGCCAGATGGCCCCAGGTGTCGTTCTCACT...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTCCTGTGTATCCTGGATaGAGGCAGGGCCGGACACTG +
Preference number: 4 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCPVYPG*RQGRTL
Trigger: CAGTGTCCGGCCCTGCCTCCATCCAGGATACACAGG...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTGCTCCAGGGACTGCTTaGCTGCTCCACAGTGACGGT +
Preference number: 4 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCAPGTA*LLHSDG
Trigger: ACCGTCACTGTGGAGCAGCCAAGCAGTCCCTGGAGC...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAAACCTGTTGTGAATCTTaGAAACTCAAGCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQTCCES*KLKPQC
Trigger: GCACTGGGGCTTGAGTTTCCAAGATTCACAACAGGT...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATGTGACGTCAAGCTTTTaGGTCCCTGTCCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDVTSSF*VPVLGP
Trigger: GGGCCCCAGGACAGGGACCCAAAAGCTTGACGTCAC...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAAGGTGCCCAGGACGCATaGGCTCTGATGGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: LSCGLQLQDPMDEAECHEGAQDA*ALMGRG
Trigger: CCCTCTTCCCATCAGAGCCCATGCGTCCTGGGCACC...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCGGCCTGTGGCAGAATTaGATGTCGCCAGCGTGGATT +
Preference number: 4 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSGLWQN*MSPAWI
Trigger: AATCCACGCTGGCGACATCCAATTCTGCCACAGGCC...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636203.1
3UTR CAA 72 bp GACGCAGGGGAGAGAGGTTCACACTCGTGTTTTCACTaGTTAGAGGCGCTCGGCCACACCCAGCACCCATGT +
Preference number: 4 (lower is better)
Translates to: DAGERGSHSCFH*LEALGHTQHPC
Trigger: ACATGGGTGCTGGGTGTGGCCGAGCGCCTCTAACAAGTGAAAACACGAGTGTGAACCTCTCTCCCCTGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CAA 72 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTaGGCAGCTCCGTTTAAGGCTCCAGGGACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: KGVLGNCGPPPT*AAPFKAPGTAW
Trigger: CCAAGCAGTCCCTGGAGCCTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp ATGTACATCAATTACAGAGGTGGCGACGCAGGGGAGAGAGGTTCACACTCGTGTCCTTGGCCAGCGCTTTaGCCGCATCCTCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: MYINYRGGDAGERGSHSCPWPAL*PHPRSP
Trigger: AGGAGAGCGAGGATGCGGTCAAAGCGCTGGCCAAGG...ACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCACTCCTGGTTGCCATTaGGCACCGTCTCGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFTPGCH*APSRPA
Trigger: TGCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGT...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACACTCCTGGTTGCCATTaGGCACCGTCTCGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDTPGCH*APSRPA
Trigger: TGCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGT...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCGCCTTGGCCACCCAGTaGTGGTCCAGCTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSALATQ*WSSSAA
Trigger: AGCTGCCGAGCTGGACCATCACTGGGTGGCCAAGGC...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTGGAGGGCCTCCCTGCTaGAGTTCACTTGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCGGPPC*SSLGTA
Trigger: TGCTGTACCAAGTGAACTTCAGCAGGGAGGCCCTCC...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGGGCCAGCCTTGTACTTaGGACCGCTGCTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKGQPCT*DRCCSP
Trigger: AGGAGAACAGCAGCGGTCTCAAGTACAAGGCTGGCC...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACTGGGCGCTGTGGAGCTaGAACCGCAGAGTCCATCGG +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDWALWS*NRRVHR
Trigger: CCGATGGACTCTGCGGTTTCAGCTCCACAGCGCCCA...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCAACAATTTGCCAGGTTaGAGAACACACGCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGNNLPG*RTHALR
Trigger: CCTCAAAGCGTGTGTTCTTCAACCTGGCAAATTGTT...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATGGGGAGCCTCATGGGTaGAAGAGGGTTGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDGEPHG*KRVVMA
Trigger: TGCCATCACAACCCTCTTTCACCCATGAGGCTCCCC...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAAGGAGCACGGGCTGGCTaGAGTCGCCATCCGCTCGGA +
Preference number: 4 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQGARAG*SRHPLG
Trigger: TCCGAGCGGATGGCGACTGCAGCCAGCCCGTGCTCC...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361144.9
CDS-3UTR GCA 90 bp ATGTACATCAATTACAGAGGTGGCGACGCAGGGGAGAGAGGTTCACACTCGTGTGGACCTCAGAGGACTTaGCGCCCTGCGACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: MYINYRGGDAGERGSHSCGPQRT*RPATPP
Trigger: TGGAGGAGTCGCAGGGCGGCAAGTCCTCTGAGGTCC...ACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACGGACCTCAGAGGACTTaGCGCCCTGCGACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDGPQRT*RPATPP
Trigger: TGGAGGAGTCGCAGGGCGGCAAGTCCTCTGAGGTCC...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCGCTCTGGCTAGCTCCTaGTCCTTCTGGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSANSSSIRPPPCVTELFALASS*SFWASW
Trigger: CCAGCTGGCCCAGAAGGAGCAGGAGCTAGCCAGAGC...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGGTGGCATACAGCTGCTaGATCTGGCTCACCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKVAYSC*IWLTRS
Trigger: AGACCTGGTGAGCCAGATGCAGCAGCTGTATGCCAC...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGAGTGTGGCATACAGCTaGTGCATCTGGCTCACCAGG +
Preference number: 4 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKSVAYS*CIWLTR
Trigger: CCTGGTGAGCCAGATGCAGCAGCTGTATGCCACACT...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCAGCGGGAGGTCCGCCTaGACCACCCACTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSSGRSA*TTHSWL
Trigger: CAACCAGGAGTGGGTGGTGCAGGCGGACCTCCCGCT...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGGGACTGTCGCCGTTaGAGAGGGAGTGTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPRDCRR*RGSVSG
Trigger: ACCGGACACACTCCCTCTGCAACGGCGACAGTCCCG...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCACGGGACTGTCGCCGTTaGAGAGGGAGTGTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPRDCRR*RGSVSG
Trigger: ACCGGACACACTCCCTCTGCAACGGCGACAGTCCCG...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCCCCAGCACCCATGTGTaGCAGCGCACACGTGCACAC +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFPSTHV*QRTRAH
Trigger: GTGTGCACGTGTGCGCTGGCACACATGGGTGCTGGG...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCGGTGGAGGGCTCAGGTaGTGGACTCTGTGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFGGGLR*WTLCPH
Trigger: GTGGGGACACAGAGTCCAGCACCTGAGCCCTCCACC...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCTATTGTCTTCCATCATaGTCAGGATTTTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGYCLPS*SGFWPG
Trigger: CCCAGGCCAAAATCCTGAGCATGATGGAAGACAATA...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376030.7
CDS-3UTR GCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCAGGACCGCCCCATCGATaGGGAGCGCGAGCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPGPPHR*GARAAY
Trigger: ATAAGCAGCTCGCGCTCCGCATCGATGGGGCGGTCC...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTATTGGACACGTTCAGGTaGTTCTCCAGGTCTCGCTTC +
Preference number: 4 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVLDTFR*FSRSRF
Trigger: GAAGCGAGACCTGGAGAAGCACCTGAACGTGTCCAA...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACACGGGGTCAATGTTCTaGGTCTCGCAGCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHTGSMF*VSQRAR
Trigger: CCGGGCCCGCTGCGAGACGCAGAACATTGACCCCGT...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTGTTCTCCTCCTTTCCTaGCCGCGTGACGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPVLLLS*PRDAGG
Trigger: GCCTCCAGCGTCACGCGGGCAGGAAAGGAGGAGAAC...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAAGGCACTGTTCCAGCCTaGTCTGGGGGTCATCGTCTC +
Preference number: 4 (lower is better)
Translates to: LSCGLQLQDPMDEAECHEGTVPA*SGGHRL
Trigger: GAGACGATGACCCCCAGAGCAGGCTGGAACAGTGCC...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGGCTAAGCCCCACTCCTaGACGGATCATTCACCGGCT +
Preference number: 4 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKAKPHS*TDHSPA
Trigger: AGCCGGTGAATGATCCGTGCAGGAGTGGGGCTTAGC...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTTCCTTTTGCACACTaGTTCAACCTAAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFLPFAH*FNLKSW
Trigger: CCAACTCTTTAGGTTGAAGCAGTGTGCAAAAGGAAG...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCCTCAGAGGTTGCCATTaGCCACAGGCTTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSLRGCH*PQAFFS
Trigger: GGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAG...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACACCCCGGTGCGGCGATaGAAAGGGGGCAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHTPVRR*KGGSSW
Trigger: CCAGGAACTGCCCCCTTTGCATCGCCGCACCGGGGT...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR GCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCAGCCTTGGCAAATCTTaGACAGCAGCAGTTCCATGC +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGSLGKS*TAAVPC
Trigger: GCATGGAACTGCTGCTGTGCAAGATTTGCCAAGGCT...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR GCA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCAGGGTGTGCAATGATTaGACAGCTGCTTGCATAAGT +
Preference number: 4 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGRVCND*TAACIS
Trigger: ACTTATGCAAGCAGCTGTGCAATCATTGCACACCCT...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCTACAGCTGCTGCATCTaGCTCACCAGGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSYSCCI*LTRSVF
Trigger: GAAGACAGACCTGGTGAGCCAGATGCAGCAGCTGTA...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACGTGGCCTCCTTGGCTTaGCGCCGCAGCTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHVASLA*RRSSHF
Trigger: GAAGTGGGAGCTGCGGCGCCAAGCCAAGGAGGCCAC...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGTCCTTGAGGTCCAGCTaGGAGCGCAGTGCCGTGGCG +
Preference number: 4 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWSLRSS*ERSAVA
Trigger: CGCCACGGCACTGCGCTCCCAGCTGGACCTCAAGGA...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCCGAGGGAATGCCGCTTaGGGACGTCCTTGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: GSANSSSIRPPPCVTELFRGNAA*GRPWSA
Trigger: CGCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCG...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp ATGTACATCAATTACAGAGGTGGCGACGCAGGGGAGAGAGGTTCACACTCGTGTCGAGGGAATGCCGCTTaGGGACGTCCTTGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: MYINYRGGDAGERGSHSCRGNAA*GRPWSA
Trigger: CGCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCG...ACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACGTTGACTCTGCCGGATaGCTGCGGTCAGCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHVDSAG*LRSAGG
Trigger: ACCTCCCGCTGACCGCAGCCATCCGGCAGAGTCAAC...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACGTTGACTCTGCCGGATaGCTGCGGTCAGCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDVDSAG*LRSAGG
Trigger: ACCTCCCGCTGACCGCAGCCATCCGGCAGAGTCAAC...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGCATCAATTACAGAGGTaGCGACGCAGGGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKHQLQR*RRRGER
Trigger: CCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATG...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTAAATCCAATGGTCCCTaGGTTCTGGCCACCCTAAAC +
Preference number: 4 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCKSNGP*VLATLN
Trigger: GTTTAGGGTGGCCAGAACCCAGGGACCATTGGATTT...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTTGGGTGGGAAGAAGGTaGAGGATCCTTTCATGCATG +
Preference number: 4 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCWVGRR*RILSCM
Trigger: CATGCATGAAAGGATCCTCCACCTTCTTCCCACCCA...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp ATGTACATCAATTACAGAGGTGGCGACGCAGGGGAGAGAGGTTCACACTCGTGTCCAGAATGGGGAGGGTaGAGGGCTCAGGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: MYINYRGGDAGERGSHSCPEWGG*RAQVLD
Trigger: GTCCAGCACCTGAGCCCTCCACCCTCCCCATTCTGG...ACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATGAGTCCAAGGGATCCTaGGAGATTCTAAGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHESKGS*EILSVA
Trigger: AGCCACACTTAGAATCTCCCAGGATCCCTTGGACTC...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCAGGATGCTGACCTGGTaGAACTTCTTGGACACGTTC +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGRMLTW*NFLDTF
Trigger: GAACGTGTCCAAGAAGTTCCACCAGGTCAGCATCCT...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAAGCCTGTGGAGTTGGCTaGGTGGAAGACGGCGCTCAT +
Preference number: 4 (lower is better)
Translates to: LSCGLQLQDPMDEAECHEACGVG*VEDGAH
Trigger: ATGAGCGCCGTCTTCCACCCAGCCAACTCCACAGGC...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTTGTTCCAGCCTGCTCTaGGGGTCATCGTCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCCSSLL*GSSSPQ
Trigger: TTGCGGAGACGATGACCCCCAGAGCAGGCTGGAACA...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATCAGCGTAGCCACTCCTaGGTGGATCGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDQRSHS*VDRQTA
Trigger: AGCTGTTTGCCGATCCACCCAGGAGTGGCTACGCTG...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCGCAGATAGTGGGGTTTaGAATCTCAGTAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFADSGV*NLSKAK
Trigger: TTTGGCTTTACTGAGATTCCAAACCCCACTATCTGC...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCGGAGGTCGAGCATCATaGTTCCAACAAGTGACTCGC +
Preference number: 4 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSGGRAS*FQQVTR
Trigger: GCGAGTCACTTGTTGGAACCATGATGCTCGACCTCC...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCAGCTTCAGGACCCTATaGATGAGGCCGAATGTCATG +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGSFRTL*MRPNVM
Trigger: CATGACATTCGGCCTCATCCATAGGGTCCTGAAGCT...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGAGGCTGGATGTGGCTTaGGAGAGACCTGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKRLDVA*ERPVAP
Trigger: TGGTGCCACAGGTCTCTCCCAAGCCACATCCAGCCT...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATCTCCAAATGCTCACCTaGCTGTCAGGGATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDLQMLT*LSGMGS
Trigger: GCTCCCCATCCCTGACAGCCAGGTGAGCATTTGGAG...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATAGCTGGTCACTGTTCTaGAGCTGGCCCCTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDSWSLF*SWPLCS
Trigger: GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCT...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTTTTGGGTCCCTGTCCTaGGGCCCTCCACGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLFGSLS*GPPRWP
Trigger: CGGCCAGCGTGGAGGGCCCCAGGACAGGGACCCAAA...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACCAGGTCAGAGGGGCCTaGATGCCCCTGGAGGGAACA +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDQVRGA*MPLEGT
Trigger: TGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACCTG...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTCTCGGGGAAGCGATTTaGGGCCACGGCCCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVALGEAI*GHGPRN
Trigger: GTTTCTAGGGCCGTGGCCCCAAATCGCTTCCCCGAG...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCTCCCCACTCCTCGCGTaGCAGCAGGGAGGGACTGAG +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSSPLLA*QQGGTE
Trigger: CTCAGTCCCTCCCTGCTGCCACGCGAGGAGTGGGGA...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CCA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAAGAGTCTCCTTCTCAGTaGGTAGAAAAGGGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQESPSQ*VEKGLC
Trigger: ACAAAGACCCTTTTCTACCCACTGAGAAGGAGACTC...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636203.1
3UTR CAA 72 bp GCCGGGCTGTGTAGAGACGCCCTTCTCTCCACTTTATaGGGTCCAGATTGTTGTGTGGCTTCTCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: AGLCRDALLSTL*GPDCCVASPLL
Trigger: GAGGAGGGGAGAAGCCACACAACAATCTGGACCCAATAAAGTGGAGAGAAGGGCGTCTCTACACAGCCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 72 bp GAGCCAACCCATTTCCTCTGCAGCCACAAAATGCCTTaGTGTGTCAGGGCTCGGGAGATTCTCCTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: EPTHFLCSHKMP*CVRAREILLAG
Trigger: GCCAGCGAGGAGAATCTCCCGAGCCCTGACACACAAAGGCATTTTGTGGCTGCAGAGGAAATGGGTTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACCCTTGGCCAGCGCTTTaGCCGCATCCTCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDPWPAL*PHPRSP
Trigger: AGGAGAGCGAGGATGCGGTCAAAGCGCTGGCCAAGG...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTAAGACGACAGAGAGTTaGCAGGTTCACACACGGTTT +
Preference number: 4 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCKTTES*QVHTRF
Trigger: AAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCTT...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGCCTCCGGCACAGGAATaGCAGCGGCGCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: CHRAFQVEGFCILPREIQPPAQE*QRRLQP
Trigger: GGGCTGGAGGCGCCGCTGTCATTCCTGTGCCGGAGG...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376030.7
CDS-3UTR TCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTTCAACCAGGTGGTTCTaGAAGGCCTGGGAGTACTGG +
Preference number: 4 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCSTRWF*KAWEYW
Trigger: CCAGTACTCCCAGGCCTTTCAGAACCACCTGGTTGA...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAATCCCCAGCAGGATGCTaGCCTGGTGGAACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LSCGLQLQDPMDEAECHESPAGC*PGGTSW
Trigger: CCAAGAAGTTCCACCAGGTCAGCATCCTGCTGGGGA...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTGGGCCCATCTCCAGCTaGACAGGAAAGTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPGPISS*TGKSMA
Trigger: GGCCATGGACTTTCCTGTTCAGCTGGAGATGGGCCC...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCCATGGTTCCAACAAGTaGCTCGCTTTGATAACCCGA +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGHGSNK*LALITR
Trigger: TCGGGTTATCAAAGCGAGTCACTTGTTGGAACCATG...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTTGGGGGTCAGAAAGCTaGGAGTCTACCAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVAWGSES*ESTRQV
Trigger: CACCTGCCTGGTAGACTCTCAGCTTTCTGACCCCCA...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACGCTCTGGCTAGCTCCTaGTCCTTCTGGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHALASS*SFWASW
Trigger: CCAGCTGGCCCAGAAGGAGCAGGAGCTAGCCAGAGC...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTGTGGCATACAGCTGCTaGATCTGGCTCACCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCVAYSC*IWLTRS
Trigger: AGACCTGGTGAGCCAGATGCAGCAGCTGTATGCCAC...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACCAGCTGGGAGCGCAGTaGCGTGGCGTGGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: DDRELTGSHTVCGMYINYQLGAQ*RGVVCG
Trigger: GCCACAGACCACGCCACGGCACTGCGCTCCCAGCTG...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp ATGTACATCAATTACAGAGGTGGCGACGCAGGGGAGAGAGGTTCACACTCGTGTTCGAGGGACTTCCGCTaGTTCCCTCTGGCGAAGACG +
Preference number: 4 (lower is better)
Translates to: MYINYRGGDAGERGSHSCSRDFR*FPLAKT
Trigger: CGTCTTCGCCAGAGGGAAGCAGCGGAAGTCCCTCGA...ACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCTCGAGGGACTTCCGCTaGTTCCCTCTGGCGAAGACG +
Preference number: 4 (lower is better)
Translates to: GSANSSSIRPPPCVTELFSRDFR*FPLAKT
Trigger: CGTCTTCGCCAGAGGGAAGCAGCGGAAGTCCCTCGA...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACGTGCCAGCGCACACGTaGACACGCACCCCACGCACG +
Preference number: 4 (lower is better)
Translates to: DDRELTGSHTVCGMYINYVPAHT*TRTPRT
Trigger: CGTGCGTGGGGTGCGTGTGCACGTGTGCGCTGGCAC...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAGGTTCACACACGGTTTaGGGTATGTACATCAATTAC +
Preference number: 4 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVGSHTV*GMYINY
Trigger: GTAATTGATGTACATACCGCAAACCGTGTGTGAACC...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACACCAGCTCCACCTGCTaGAGCCGGTCCATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHTSSTC*SRSICS
Trigger: GGAGCAGATGGACCGGCTGCAGCAGGTGGAGCTGGT...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTGGACAGGCTGCGGCCTaGCTCGGCATCACGGTAGTC +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLGQAAA*LGITVV
Trigger: GACTACCGTGATGCCGAGGCAGGCCGCAGCCTGTCC...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCAGGCGCTCATCTCCTCTaGCAGGTGTCTCCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPGAHLL*QVSPED
Trigger: ATCCTCCGGAGACACCTGGCAGAGGAGATGAGCGCC...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACGCTCAGCCTCCCGGATaGCTGTGGAGTTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHAQPPG*LWSWLG
Trigger: ACCCAGCCAACTCCACAGGCATCCGGGAGGCTGAGC...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACGGCACTGTTCCAGCCTaGTCTGGGGGTCATCGTCTC +
Preference number: 4 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHGTVPA*SGGHRL
Trigger: GAGACGATGACCCCCAGAGCAGGCTGGAACAGTGCC...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATGCACGTTGCTGTTGCTaGCTCCCAAACGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDARCCC*LPNGSF
Trigger: GAAACTGCCGTTTGGGAGGCAGCAACAGCAACGTGC...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTTCCAGATGCCCACATTaGCCTGCAGGGACCAAGACC +
Preference number: 4 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVASRCPH*PAGTKT
Trigger: GGTCTTGGTCCCTGCAGGGCAATGTGGGCATCTGGA...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATCGCTGGCCCAGGAACTaGAGATCTGAGGCTACTTGT +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDRWPRN*RSEATC
Trigger: ACAAGTAGCCTCAGATCTGCAGTTCCTGGGCCAGCG...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CCA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGAGGCTTCTTTGGCTCTaGCTAGCTCCTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKRLLWL*LAPAPS
Trigger: AGAAGGAGCAGGAGCTAGCCAGAGCCAAAGAAGCCT...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGCCTGCAAGGCTTCTTTaGCTCTGGCTAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKPARLL*LWLAPA
Trigger: AGCAGGAGCTAGCCAGAGCCAAAGAAGCCTTGCAGG...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACGGTCTGTGGCCTCCTTaGCTTGGCGCCGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: DDRELTGSHTVCGMYINYGLWPP*LGAAAP
Trigger: GGGAGCTGCGGCGCCAAGCCAAGGAGGCCACAGACC...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACCCGTGGCGTGGTCTGTaGCCTCCTTGGCTTGGCGCC +
Preference number: 4 (lower is better)
Translates to: DDRELTGSHTVCGMYINYPWRGL*PPWLGA
Trigger: GGCGCCAAGCCAAGGAGGCCACAGACCACGCCACGG...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGACGCAGTGCCGTGGCGTaGTCTGTGGCCTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRRSAVA*SVASLA
Trigger: AGCCAAGGAGGCCACAGACCACGCCACGGCACTGCG...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAGGACTGTTTGGCCATaGCCAGCTCGGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDRTVWP*PARPPA
Trigger: AGCTGGAGGCCGAGCTGGCCATGGCCAAACAGTCCT...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTAGAGGGCTGCCGGGAGTaGCAGGGGCTCACCCTGACC +
Preference number: 4 (lower is better)
Translates to: RRQRVDRFTHGLRYVHQLEGCRE*QGLTLT
Trigger: GGTCAGGGTGAGCCCCTGCCACTCCCGGCAGCCCTC...TAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGAGAGGGCTGCCGGGAGTaGCAGGGGCTCACCCTGACC +
Preference number: 4 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGEGCRE*QGLTLT
Trigger: GGTCAGGGTGAGCCCCTGCCACTCCCGGCAGCCCTC...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGTCCGCTGCTTCCCTCTaGCGAAGACGCGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWSAASL*RRRGRW
Trigger: CCATCTCCCGCGTCTTCGCCAGAGGGAAGCAGCGGA...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCCCCCAGGACAGGGTCTaGTCCCACACGTTCACACCA +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFPQDRV*SHTFTP
Trigger: TGGTGTGAACGTGTGGGACCAGACCCTGTCCTGGGG...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp ATGTACATCAATTACAGAGGTGGCGACGCAGGGGAGAGAGGTTCACACTCGTGTGGAGGGCTCAGGTGCTaGACTCTGTGTCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: MYINYRGGDAGERGSHSCGGLRC*TLCPHC
Trigger: ACAGTGGGGACACAGAGTCCAGCACCTGAGCCCTCC...ACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCGTGCCCGCCTTCCAGTaGGACATAGGGGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSVPAFQ*DIGVVL
Trigger: GAGGACCACCCCTATGTCCCACTGGAAGGCGGGCAC...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACCACTTGAGCACCCGCTaGTTGGTCCACACCACGGGG +
Preference number: 4 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDHLSTR*LVHTTG
Trigger: CCCCGTGGTGTGGACCAACCAGCGGGTGCTCAAGTG...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTACCAGCACAGCACCATaGACGCCGCTGTTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPTSTAP*TPLLVR
Trigger: CCTGACCAACAGCGGCGTCCATGGTGCTGTGCTGGT...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACGGAGCCTGTGTATCCTaGATGGAGGCAGGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHGACVS*MEAGPD
Trigger: GTCCGGCCCTGCCTCCATCCAGGATACACAGGCTCC...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACGGCCTCCTCCCACCTTaGCAGCTCCGTTTAAGGCTC +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDGLLPP*QLRLRL
Trigger: GAGCCTTAAACGGAGCTGCCAAGGTGGGAGGAGGCC...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGGTAGCCACTCCTGGGTaGATCGGCAAACAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKVATPG*IGKQLF
Trigger: GAAGAGCTGTTTGCCGATCCACCCAGGAGTGGCTAC...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCGCAGATAGTGGGGTTTaGAATCTCAGTAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGADSGV*NLSKAK
Trigger: TTTGGCTTTACTGAGATTCCAAACCCCACTATCTGC...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCTACCAACTAGACATTTaGTCTCAGACAGCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFYQLDI*SQTARK
Trigger: CTTTCTTGCTGTCTGAGACCAAATGTCTAGTTGGTA...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACCCTGTGGCACCAGGTTaGAGGGAGGTCTCACCTCTC +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDPVAPG*REVSPL
Trigger: GAGAGGTGAGACCTCCCTCCAACCTGGTGCCACAGG...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCCTTGGGAGAGACCTGTaGCACCAGGTTGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GSANSSSIRPPPCVTELFLGRDL*HQVGGR
Trigger: CCTCCCTCCAACCTGGTGCCACAGGTCTCTCCCAAG...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCTTCTCTCCACTTTATTaGGTCCAGATTGTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGFSPLY*VQIVVW
Trigger: CCACACAACAATCTGGACCCAATAAAGTGGAGAGAA...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTAAAGGATGCCGTCGCTaGCCCAGGAACTGCAGATCT +
Preference number: 4 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCKGCRR*PRNCRS
Trigger: AGATCTGCAGTTCCTGGGCCAGCGACGGCATCCTTT...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636203.1
3UTR CAA 72 bp CACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTaGGACGAGGGACATTTACAAGCACAGAGTGCACAA +
Preference number: 4 (lower is better)
Translates to: HILCQTGSRSSG*DEGHLQAQSAQ
Trigger: TTGTGCACTCTGTGCTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCTTGTGCAGGTTCTTCTaGACTGGGCCGGGACTGTCG +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFLCRFF*TGPGLS
Trigger: CGACAGTCCCGGCCCAGTTCAGAAGAACCTGCACAA...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGTTAAAAGAGCCGGTTTaGCCTCTGACAAACCCAGCC +
Preference number: 4 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKLKEPV*PLTNPA
Trigger: GGCTGGGTTTGTCAGAGGTCAAACCGGCTCTTTTAA...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACCCATGGCCTCGGCATTaGATGTGGGCTCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHPWPRH*MWAPAP
Trigger: TGGTGCTGGAGCCCACATTCAATGCCGAGGCCATGG...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTACATGGTTCCAACAAGTaGCTCGCTTTGATAACCCGA +
Preference number: 4 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVHGSNK*LALITR
Trigger: TCGGGTTATCAAAGCGAGTCACTTGTTGGAACCATG...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTGGGGAGCCTCATGGGTaGAAGAGGGTTGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPGEPHG*KRVVMA
Trigger: TGCCATCACAACCCTCTTTCACCCATGAGGCTCCCC...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACCCCTGGAGGGAACACTaGGGTCACCTCTGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHPWREH*GHLWPN
Trigger: ATTTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGG...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCCCTGGAGGGAACACTaGGGTCACCTCTGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPPWREH*GHLWPN
Trigger: ATTTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGG...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTGGACCTCAGAGGACTTaGCGCCCTGCGACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLGPQRT*RPATPP
Trigger: TGGAGGAGTCGCAGGGCGGCAAGTCCTCTGAGGTCC...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACATGAAGTCTCGGAGCTaGTCCTCGCGGCTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHMKSRS*SSRLSS
Trigger: ACTGGAGAGCCGCGAGGAGCAGCTCCGAGACTTCAT...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp ATGTACATCAATTACAGAGGTGGCGACGCAGGGGAGAGAGGTTCACACTCGTGTACAGACCACATCCTCTaGCAGACGGGCTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: MYINYRGGDAGERGSHSCTDHIL*QTGSRS
Trigger: ACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTCTGT...ACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGATGAGGGCCTCTGCCTaGTTGCTGTTTGCTGACTTT +
Preference number: 4 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKMRASA*LLFADF
Trigger: AAAGTCAGCAAACAGCAAGCAGGCAGAGGCCCTCAT...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTTCCCGCAGGAGCACTTaGGCTCCAAGCTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLSRRST*APSWGF
Trigger: GAACCCCCAGCTTGGAGCGCAAGTGCTCCTGCGGGA...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTCTCACCAGCTCCACCTaGTGCAGCCGGTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLLTSST*CSRSIC
Trigger: GCAGATGGACCGGCTGCAGCAGGTGGAGCTGGTGAG...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCCCTGCCTGGGCACGTTaGTGTTGCTGCCTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSPAWAR*CCCLPN
Trigger: GTTTGGGAGGCAGCAACAGCAACGTGCCCAGGCAGG...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTGTGGGAATAACTGCCTaGCTGGGCACGTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVAVGITA*LGTLLL
Trigger: CAACAGCAACGTGCCCAGGCAGGCAGTTATTCCCAC...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACGTGTTGCCTCAGGCCTaGTGGCCTCCTGCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDVLPQA*WPPAVN
Trigger: GTTCACAGCAGGAGGCCAGCAGGCCTGAGGCAACAC...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGACGCGGTTGCCCGTGTTaGCTCAGGCCTGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGRGCPC*LRPAGL
Trigger: GAGGCCAGCAGGCCTGAGGCAACACGGGCAACCGCG...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGCGCGGTTGCCCGTGTTaGCTCAGGCCTGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: CHRAFQVEGFCILPREIQRGCPC*LRPAGL
Trigger: GAGGCCAGCAGGCCTGAGGCAACACGGGCAACCGCG...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAGTCTACCAGGCAGGTaGCTTCTCCACCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDSLPGR*LLHPQA
Trigger: TGCCTGTGGGTGGAGAAGGCACCTGCCTGGTAGACT...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACGAGTGGAAGTGGTGGTaGCCAGGACGCATGGGCTCT +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHEWKWW*PGRMGS
Trigger: AGAGCCCATGCGTCCTGGGCACCACCACTTCCACTC...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCATGCACCACCCACTCCTaGTTGCCATTGAGCACCGTC +
Preference number: 4 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPCTTHS*LPLSTV
Trigger: GACGGTGCTCAATGGCAACCAGGAGTGGGTGGTGCA...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAAGTTGACTCTGCCGGATaGCTGCGGTCAGCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQVDSAG*LRSAGG
Trigger: ACCTCCCGCTGACCGCAGCCATCCGGCAGAGTCAAC...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCCAGGTTCTTCTGAACTaGGCCGGGACTGTCGCCGTT +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFQVLLN*AGTVAV
Trigger: AACGGCGACAGTCCCGGCCCAGTTCAGAAGAACCTG...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAACGAAGACGCGGGAGATaGAGCCGAATCCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LSCGLQLQDPMDEAECHERRRGR*SRIPSS
Trigger: AGAAGATGGGATTCGGCTCCATCTCCCGCGTCTTCG...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCGTGGTTAAAGTGACTTaGGCGCACCCCCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFVVKVT*AHPQDR
Trigger: CCTGTCCTGGGGGTGCGCCCAAGTCACTTTAACCAC...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGAGCTTTGAAATCCAATaGTCCCTGGGTTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKSFEIQ*SLGSGH
Trigger: GTGGCCAGAACCCAGGGACCATTGGATTTCAAAGCT...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGTGGGTGGGAAGAAGGTaGAGGATCCTTTCATGCATG +
Preference number: 4 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKWVGRR*RILSCM
Trigger: CATGCATGAAAGGATCCTCCACCTTCTTCCCACCCA...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCTCTTGTCTCCTGGGGTaGGTAGGCTCAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFSCLLG*VGSGCC
Trigger: ACAGCAGCCTGAGCCTACCCACCCCAGGAGACAAGA...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCTGTTGTCTAGAGGTGTaGGTTGAGCTGTTAGTTGTT +
Preference number: 4 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGICCLEV*VELLVV
Trigger: AACAACTAACAGCTCAACCCACACCTCTAGACAACA...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAAACTTGCGCTCCAAGCTaGGGGTTCTCCATGTTCGTC +
Preference number: 4 (lower is better)
Translates to: LSCGLQLQDPMDEAECHETCAPS*GFSMFV
Trigger: GACGAACATGGAGAACCCCCAGCTTGGAGCGCAAGT...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGAAGGCCTGGGAGTACTaGGACAGGCCAATGTCATTC +
Preference number: 4 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKKAWEY*DRPMSF
Trigger: GAATGACATTGGCCTGTCCCAGTACTCCCAGGCCTT...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATTCACGTTGGGTCTGGTaGAGCCACCAGTTCCTTACA +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDSRWVW*SHQFLT
Trigger: TGTAAGGAACTGGTGGCTCCACCAGACCCAACGTGA...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACGCTCCAGGGACTGCTTaGCTGCTCCACAGTGACGGT +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHAPGTA*LLHSDG
Trigger: ACCGTCACTGTGGAGCAGCCAAGCAGTCCCTGGAGC...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACCTTGGGAGAGACCTGTaGCACCAGGTTGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHLGRDL*HQVGGR
Trigger: CCTCCCTCCAACCTGGTGCCACAGGTCTCTCCCAAG...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCCCAGGTCATCCAGGCTaGATGTGGCTTGGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: GSANSSSIRPPPCVTELFPGHPG*MWLGRD
Trigger: GTCTCTCCCAAGCCACATCCAGCCTGGATGACCTGG...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCCTGGCTGTCAGGGATaGGGAGCCTCATGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPPGCQG*GASWVK
Trigger: TTTCACCCATGAGGCTCCCCATCCCTGACAGCCAGG...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCAGCTGGTCACTGTTCTaGAGCTGGCCCCTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: GSANSSSIRPPPCVTELFSWSLF*SWPLCS
Trigger: GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCT...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACCTCGGGGAAGCGATTTaGGGCCACGGCCCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDLGEAI*GHGPRN
Trigger: GTTTCTAGGGCCGTGGCCCCAAATCGCTTCCCCGAG...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACCAGATGCGTCGGAGATaGCAGAGGGCTGCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: DDRELTGSHTVCGMYINYQMRRR*QRAAGS
Trigger: ACTCCCGGCAGCCCTCTGTCATCTCCGACGCATCTG...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACGGTGTCGAGGGGAGTTaGTGTCGCTCGGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: DDRELTGSHTVCGMYINYGVEGS*CRSVWT
Trigger: CGTCCACACCGAGCGACATCAACTCCCCTCGACACC...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTTGTGCAGGTTCTTCTaGACTGGGCCGGGACTGTCG +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHLCRFF*TGPGLS
Trigger: CGACAGTCCCGGCCCAGTTCAGAAGAACCTGCACAA...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp ATGTACATCAATTACAGAGGTGGCGACGCAGGGGAGAGAGGTTCACACTCGTGTCAGAGGTTGTCCTTGTaGACAGGAGGCAAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: MYINYRGGDAGERGSHSCQRLSL*TGGKPD
Trigger: GTCAGGCTTGCCTCCTGTTCACAAGGACAACCTCTG...ACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400798.6
CDS-3UTR TCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTGGCCGCTATGTACAGTaGGAACGACACCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLGRYVQ*ERHLGP
Trigger: TGGCCCCAGGTGTCGTTCTCACTGTACATAGCGGCC...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATCCACGGTCTTCGGCATaGGAGAGGTGTAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDPRSSA*ERCNSQ
Trigger: TTGAGAATTACACCTCTCTCATGCCGAAGACCGTGG...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACCTGCAGCCTGGGGTCTaGAAACAGCGATGCCAACAG +
Preference number: 4 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDLQPGV*KQRCQQ
Trigger: CTGTTGGCATCGCTGTTTTCAGACCCCAGGCTGCAG...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCGCAGCAGGGAGGGACTaGGACCTGCTGCAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: FAHCFNLKSWSELALYHFAAGRD*DLLQRP
Trigger: GGGCCGCTGCAGCAGGTCTCAGTCCCTCCCTGCTGC...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR GCA 90 bp ATGTACATCAATTACAGAGGTGGCGACGCAGGGGAGAGAGGTTCACACTCGTGTAGTGTGGCATACAGCTaGTGCATCTGGCTCACCAGG +
Preference number: 4 (lower is better)
Translates to: MYINYRGGDAGERGSHSCSVAYS*CIWLTR
Trigger: CCTGGTGAGCCAGATGCAGCAGCTGTATGCCACACT...ACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGAGCGGGAGGTCCGCCTaGACCACCCACTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: CHRAFQVEGFCILPREIQSGRSA*TTHSWL
Trigger: CAACCAGGAGTGGGTGGTGCAGGCGGACCTCCCGCT...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACCCCAGCACCCATGTGTaGCAGCGCACACGTGCACAC +
Preference number: 4 (lower is better)
Translates to: DDRELTGSHTVCGMYINYPSTHV*QRTRAH
Trigger: GTGTGCACGTGTGCGCTGGCACACATGGGTGCTGGG...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGAGGGAGGAACAGAAGCTaGTGGAGGCCCCTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRGRNRS*WRPLGE
Trigger: TTCTCCGAGGGGCCTCCAGCAGCTTCTGTTCCTCCC...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGCCTGCCTGGCCCACCTaGATCCTAAACCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWPAWPT*ILNPGQ
Trigger: TTGTCCTGGGTTTAGGATGCAGGTGGGCCAGGCAGG...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGAACGGGGTCAATGTTCTaGGTCTCGCAGCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGTGSMF*VSQRAR
Trigger: CCGGGCCCGCTGCGAGACGCAGAACATTGACCCCGT...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATGTTGGTCAGGTTGTCTaGGTACTCCTTCAGGTCGAT +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDVGQVV*VLLQVD
Trigger: ATCGACCTGAAGGAGTACGCAGACAACCTGACCAAC...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTGGCGCTCATCTCCTCTaGCAGGTGTCTCCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLGAHLL*QVSPED
Trigger: ATCCTCCGGAGACACCTGGCAGAGGAGATGAGCGCC...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACCAGGGACTGCTTGGCTaGTCCACAGTGACGGTCACT +
Preference number: 4 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDQGLLG*STVTVT
Trigger: AGTGACCGTCACTGTGGAGCAGCCAAGCAGTCCCTG...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCTGGGCACGTTGCTGTTaGTGCCTCCCAAACGGCAGT +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSWARCC*CLPNGS
Trigger: ACTGCCGTTTGGGAGGCAGCAACAGCAACGTGCCCA...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTCTCAGAGGTTGCCATTaGCCACAGGCTTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVALRGCH*PQAFFS
Trigger: GGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAG...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATTCTGCAGCCACAAAATaGCTTTGTGTGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDSAATK*LCVSGL
Trigger: GAGCCCTGACACACAAAGGCATTTTGTGGCTGCAGA...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCTATTGTCTTCCATCATaGTCAGGATTTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGYCLPS*SGFWPE
Trigger: CTCAGGCCAAAATCCTGAGCATGATGGAAGACAATA...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CCA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAAAGGCTTCTTTGGCTCTaGCTAGCTCCTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSCGLQLQDPMDEAECHERLLWL*LAPAPS
Trigger: AGAAGGAGCAGGAGCTAGCCAGAGCCAAAGAAGCCT...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCACCTGCAAGGCTTCTTTaGCTCTGGCTAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPPARLL*LWLAPA
Trigger: AGCAGGAGCTAGCCAGAGCCAAAGAAGCCTTGCAGG...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCACGAAGACGCGGGAGATaGAGCCGAATCCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPRRRGR*SRIPSS
Trigger: AGAAGATGGGATTCGGCTCCATCTCCCGCGTCTTCG...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTGTTGTCTAGAGGTGTaGGTTGAGCTGTTAGTTGTT +
Preference number: 4 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHCCLEV*VELLVV
Trigger: AACAACTAACAGCTCAACCCACACCTCTAGACAACA...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACTCATGCTCAGGATTTTaGCCTGGGGGCGAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHSCSGF*PGGERG
Trigger: ACCTCTCTCGCCCCCAGGCCAAAATCCTGAGCATGA...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376030.7
CDS-3UTR CCA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGGTTCGGCTCGCAGGTTaGTCACCTCCTGGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: CHRAFQVEGFCILPREIQVRLAG*SPPGWP
Trigger: CGGCCAGCCAGGAGGTGACCAACCTGCGAGCCGAAC...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCCATTCAGCCAGGCCTTaGCCACCCAGTGATGGTCCA +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSHSARP*PPSDGP
Trigger: TGGACCATCACTGGGTGGCCAAGGCCTGGCTGAATG...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTGTGGAGTTGGCTGGGTaGAAGACGGCGCTCATCTCC +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLVELAG*KTALIS
Trigger: GGAGATGAGCGCCGTCTTCCACCCAGCCAACTCCAC...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACTGTTTTAGGGAACTGTaGGCCTCCTCCCACCTTGGC +
Preference number: 4 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHCFREL*ASSHLG
Trigger: GCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACA...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGACAATGCACTGGGCGCTaGGGTGTGGGGTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGQCTGR*GVGLGS
Trigger: GGACCCCAACCCCACACCCCAGCGCCCAGTGCATTG...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCACAACAAAGGTTTGTTaGGTTAACAATGTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: SSPTPALSDVSARGSTSCTTKVC*VNNVKH
Trigger: ATGCTTGACATTGTTAACCCAACAAACCTTTGTTGT...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACAGGCTGGATGTGGCTTaGGAGAGACCTGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHRLDVA*ERPVAP
Trigger: TGGTGCCACAGGTCTCTCCCAAGCCACATCCAGCCT...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACCATCCAGGCTGGATGTaGCTTGGGAGAGACCTGTGG +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHHPGWM*LGRDLW
Trigger: CCACAGGTCTCTCCCAAGCCACATCCAGCCTGGATG...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACTTGCCTCAGGCCTGCTaGCCTCCTGCTGTGAACATT +
Preference number: 4 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHLPQAC*PPAVNI
Trigger: AATGTTCACAGCAGGAGGCCAGCAGGCCTGAGGCAA...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCCACACTCGGGCTGCTTaGACAGGATGTAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GSANSSSIRPPPCVTELFHTRAA*TGCSWS
Trigger: TGACCAGCTACATCCTGTCCAAGCAGCCCGAGTGTG...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACCCTCGAAAAGCAGAGTaGAAGTGGTGGTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDPRKAE*KWWCPG
Trigger: TCCTGGGCACCACCACTTCCACTCTGCTTTTCGAGG...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACTCGCTGGCCAGCCATTaGCAAGAATGCCAGACTCAG +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDSLASH*QECQTQ
Trigger: CTGAGTCTGGCATTCTTGCCAATGGCTGGCCAGCGA...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCCCTAACCAGGAGTCGTaGCTTCTTGACCCGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSPNQES*LLDPEG
Trigger: CCCTTCCGGGTCAAGAAGCCACGACTCCTGGTTAGG...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTTGGGGTCTTTGGTGTTaGTCATGTGGCAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPWGLWC*SCGSVQ
Trigger: CTGGACGCTGCCACATGACCAACACCAAAGACCCCA...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636203.1
3UTR CAA 72 bp ATGTCAAGCATTTCCCTGCCCCAGACCCCAAACTCATaGCCACACTCCATACCACTGTCACGGAGTGCAGAT +
Preference number: 4 (lower is better)
Translates to: MSSISLPQTPNS*PHSIPLSRSAD
Trigger: ATCTGCACTCCGTGACAGTGGTATGGAGTGTGGCAATGAGTTTGGGGTCTGGGGCAGGGAAATGCTTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 72 bp GGCTGTCATCTGGTCAATGAACTGAGGCCCGAAGGCTaGAGTCAAACTGGTTTTCAAGGCTGTGCTCATGGG +
Preference number: 4 (lower is better)
Translates to: GCHLVNELRPEG*SQTGFQGCAHG
Trigger: CCCATGAGCACAGCCTTGAAAACCAGTTTGACTCAAGCCTTCGGGCCTCAGTTCATTGACCAGATGACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 72 bp AATTTAAACCAAAAGAGGCATTCGCGGTTGCCCGTGTaGCCTCAGGCCTGCTGGCCTCCTGCTGTGAACATT +
Preference number: 4 (lower is better)
Translates to: NLNQKRHSRLPV*PQACWPPAVNI
Trigger: AATGTTCACAGCAGGAGGCCAGCAGGCCTGAGGCAACACGGGCAACCGCGAATGCCTCTTTTGGTTTAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 72 bp CTGGCCAGCCATTGGCAAGAATGCCAGACTCAGAGGTaGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LASHWQECQTQR*PLPTGFLLLSF
Trigger: AAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCATTCTTGCCAATGGCTGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp AGACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTAGGTGTCGAGGGGAGTTaGTGTCGCTCGGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: RRQRVDRFTHGLRYVHQLGVEGS*CRSVWT
Trigger: CGTCCACACCGAGCGACATCAACTCCCCTCGACACC...TAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGAGGTGTCGAGGGGAGTTaGTGTCGCTCGGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGGVEGS*CRSVWT
Trigger: CGTCCACACCGAGCGACATCAACTCCCCTCGACACC...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGTTTTGTGGTTAAAGTaGCTTGGGCGCACCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWVLWLK*LGRTPR
Trigger: CCTGGGGGTGCGCCCAAGTCACTTTAACCACAAAAC...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGTTGGGCAGACCTTGCTaGACAGCTCACACATCCTCC +
Preference number: 4 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWLGRPC*TAHTSS
Trigger: GGAGGATGTGTGAGCTGTTCAGCAAGGTCTGCCCAA...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACCTGTCATCTGGTCAATaGACTGAGGCCCGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDLSSGQ*TEARRL
Trigger: AAGCCTTCGGGCCTCAGTTCATTGACCAGATGACAG...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACCAGTGCAAACGGCCTTaGAGGAGGTCGAGCATCATG +
Preference number: 4 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDQCKRP*RRSSIM
Trigger: CATGATGCTCGACCTCCTTCAAGGCCGTTTGCACTG...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACGAAGAACACACGCTTTaGGGGTTCTCAGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDEEHTL*GFSEAD
Trigger: GTCAGCCTCTGAGAACCCTCAAAGCGTGTGTTCTTC...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCGAAGAACACACGCTTTaGGGGTTCTCAGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GSANSSSIRPPPCVTELFEEHTL*GFSEAD
Trigger: GTCAGCCTCTGAGAACCCTCAAAGCGTGTGTTCTTC...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCGCTCGGCTTCCCCCATaGGAGGAAACAATTTGCCAG +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSARLPP*EETICQ
Trigger: CTGGCAAATTGTTTCCTCTCATGGGGGAAGCCGAGC...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTATAAGTTGGCACTGCTaGCCAAAGACGTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVAISWHC*PKTWEK
Trigger: CTTCTCCCACGTCTTTGGTCAGCAGTGCCAACTTAT...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR GCA 90 bp AGACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTAGCTCTGGCTAGCTCCTaGTCCTTCTGGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RRQRVDRFTHGLRYVHQLALASS*SFWASW
Trigger: CCAGCTGGCCCAGAAGGAGCAGGAGCTAGCCAGAGC...TAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGAATGAAGTCTCGGAGCTaGTCCTCGCGGCTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRMKSRS*SSRLSS
Trigger: ACTGGAGAGCCGCGAGGAGCAGCTCCGAGACTTCAT...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCCATCCTCGCTCTCCTTaGGGTGCTGCTCATAGTTGC +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSHPRSP*GAAHSC
Trigger: GCAACTATGAGCAGCACCGCAAGGAGAGCGAGGATG...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTAGCCTTCGGCGGCAGATaGGTCGGAGATGACAGAGGG +
Preference number: 4 (lower is better)
Translates to: RRQRVDRFTHGLRYVHQLAFGGR*VGDDRG
Trigger: CCCTCTGTCATCTCCGACGCATCTGCCGCCGAAGGC...TAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp ATGTACATCAATTACAGAGGTGGCGACGCAGGGGAGAGAGGTTCACACTCGTGTTGTGGCAGGCTGTCTTaGCCTGAACTCAACCTCTCT +
Preference number: 4 (lower is better)
Translates to: MYINYRGGDAGERGSHSCCGRLS*PELNLS
Trigger: AGAGAGGTTGAGTTCAGGGCAAGACAGCCTGCCACA...ACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGACCTGCCTGGCCCACCTaGATCCTAAACCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRPAWPT*ILNPGQ
Trigger: TTGTCCTGGGTTTAGGATGCAGGTGGGCCAGGCAGG...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGATGGGTAGGCTCAGGCTaGTGTGACAAGTTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRWVGSG*CDKLGD
Trigger: GTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCA...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGACCCCAAGGCCCAGCTaGAGGTCCTCGTCACTCAGG +
Preference number: 4 (lower is better)
Translates to: CHRAFQVEGFCILPREIQTPRPS*RSSSLR
Trigger: CCTGAGTGACGAGGACCTGCAGCTGGGCCTTGGGGT...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCAAGTCCATCGGGATTTTaGCCAGGAGCAAGGGACATC +
Preference number: 4 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPSPSGF*PGARDI
Trigger: GATGTCCCTTGCTCCTGGGCAAAATCCCGATGGACT...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACCTCTGTGGGAATAACTaGCTGCCTGGGCACGTTGCT +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHLCGNN*LPGHVA
Trigger: AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAG...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACGAAACCAGCTCCAAATaGTCACCTGGCTGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDETSSK*SPGCQG
Trigger: TCCCTGACAGCCAGGTGAGCATTTGGAGCTGGTTTC...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACGAAACCAGCTCCAAATaGTCACCTGGCTGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHETSSK*SPGCQG
Trigger: TCCCTGACAGCCAGGTGAGCATTTGGAGCTGGTTTC...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCGCATCCATTAAGAGGTaGCTCATCAATATCATGGAA +
Preference number: 4 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGASIKR*LINIME
Trigger: TTCCATGATATTGATGAGGCACCTCTTAATGGATGC...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCATACAGCTGCTGCATCTaGCTCACCAGGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPYSCCI*LTRSVF
Trigger: GAAGACAGACCTGGTGAGCCAGATGCAGCAGCTGTA...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGACGCGGCTCTCCAGTGTaGCATACAGCTGCTGCATCT +
Preference number: 4 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRRGSPV*HTAAAS
Trigger: AGATGCAGCAGCTGTATGCCACACTGGAGAGCCGCG...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGGACTGTTTGGCCATaGCCAGCTCGGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: DDRELTGSHTVCGMYINYRTVWP*PARPPA
Trigger: AGCTGGAGGCCGAGCTGGCCATGGCCAAACAGTCCT...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGCACTGGTCGTACCCTTaGATGTGTGGCAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWHWSYP*MCGRLS
Trigger: AGACAGCCTGCCACACATCCAAGGGTACGACCAGTG...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAAGCTGCTGTGACAAGTTaGGGGACGGAGTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQAAVTS*GTESKG
Trigger: TCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGC...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGCTGTTTGCTGACTTTTaGACCAGGTCAGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKLFADF*TRSEGK
Trigger: CTTTCCTTCTGACCTGGTCCAAAAGTCAGCAAACAG...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGAGGTTGGTCACCTCCTaGCTGGCCGACTGGACCGCC +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILRLVTS*LADWTA
Trigger: GGCGGTCCAGTCGGCCAGCCAGGAGGTGACCAACCT...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACACTTGCGCTCCAAGCTaGGGGTTCTCCATGTTCGTC +
Preference number: 4 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDTCAPS*GFSMFV
Trigger: GACGAACATGGAGAACCCCCAGCTTGGAGCGCAAGT...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAAAGGATGCTGACCTGGTaGAACTTCTTGGACACGTTC +
Preference number: 4 (lower is better)
Translates to: LSCGLQLQDPMDEAECHERMLTW*NFLDTF
Trigger: GAACGTGTCCAAGAAGTTCCACCAGGTCAGCATCCT...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTCAGCGTAGCCACTCCTaGGTGGATCGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLQRSHS*VDRQTA
Trigger: AGCTGTTTGCCGATCCACCCAGGAGTGGCTACGCTG...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTCATCCAGGCTGGATGTaGCTTGGGAGAGACCTGTGG +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLHPGWM*LGRDLW
Trigger: CCACAGGTCTCTCCCAAGCCACATCCAGCCTGGATG...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCAGGATGGGGAGCCTCATaGGTGAAAGAGGGTTGTGAT +
Preference number: 4 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPGWGAS*VKEGCD
Trigger: ATCACAACCCTCTTTCACCCATGAGGCTCCCCATCC...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGGCAGAGTGGAAGTGGTaGTGCCCAGGACGCATGGGC +
Preference number: 4 (lower is better)
Translates to: CHRAFQVEGFCILPREIQAEWKW*CPGRMG
Trigger: GCCCATGCGTCCTGGGCACCACCACTTCCACTCTGC...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTCTCTTTTGGGGTCTTTaGTGTTGGTCATGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVALFWGL*CWSCGS
Trigger: GCTGCCACATGACCAACACCAAAGACCCCAAAAGAG...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACTGGATGTCGCCAGCGTaGATTCCATGGCTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHWMSPA*IPWLFW
Trigger: CCAAAAGAGCCATGGAATCCACGCTGGCGACATCCA...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTATCATGCTCAGGATTTTaGCCTGAGCATCCATTAAGA +
Preference number: 4 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVSCSGF*PEHPLR
Trigger: TCTTAATGGATGCTCAGGCCAAAATCCTGAGCATGA...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR TCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGACTCCTGGTTGCCATTaGGCACCGTCTCGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILTPGCH*APSRPA
Trigger: TGCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGT...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGAGAGCAGAGCTTACCCTaGCGACGATGGCGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWREQSLP*RRWRFV
Trigger: CACAAAACGCCATCGTCGTCAGGGTAAGCTCTGCTC...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp ATGTACATCAATTACAGAGGTGGCGACGCAGGGGAGAGAGGTTCACACTCGTGTCAGGCTGTCTTGCCCTaGACTCAACCTCTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: MYINYRGGDAGERGSHSCQAVLP*TQPLSK
Trigger: TTTTGAGAGAGGTTGAGTTCAGGGCAAGACAGCCTG...ACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGGGGCCCATCTCCAGCTaGACAGGAAAGTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: CHRAFQVEGFCILPREIQGPISS*TGKSMA
Trigger: GGCCATGGACTTTCCTGTTCAGCTGGAGATGGGCCC...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTCGGTTAGGACATTGGTaGGCTATGTCACCTATGTTT +
Preference number: 4 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCRLGHW*AMSPMF
Trigger: AAACATAGGTGACATAGCTCACCAATGTCCTAACCG...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTTCAGCTTTCATGGCCTaGAAGGCTTCTTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPSAFMA*KASLAL
Trigger: CAGAGCCAAAGAAGCCTTGCAGGCCATGAAAGCTGA...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCTCAGCTTTCATGGCCTaGAAGGCTTCTTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFSAFMA*KASLAL
Trigger: CAGAGCCAAAGAAGCCTTGCAGGCCATGAAAGCTGA...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGGGCATGGCGAGGGAATaGCGCTTGGGGACGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILGMARE*RLGTSL
Trigger: CAAGGACGTCCCCAAGCGGCATTCCCTCGCCATGCC...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACTCCCCTAACAACACCTaGCTGGCCCACCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: DDRELTGSHTVCGMYINYSPNNT*LAHLHP
Trigger: AGGATGCAGGTGGGCCAGGCAGGTGTTGTTAGGGGA...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGCTCACCAGCTCCACCTaGTGCAGCCGGTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILLTSST*CSRSIC
Trigger: GCAGATGGACCGGCTGCAGCAGGTGGAGCTGGTGAG...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTTGTCAAGCATTTCCCTaGCCCAGACCCCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPCQAFP*PRPQTH
Trigger: ATGAGTTTGGGGTCTGGGGCAGGGAAATGCTTGACA...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTGACAGCAAGAAAGGCTaGGTTTATGTCATTAGGGGG +
Preference number: 4 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVADSKKG*VYVIRG
Trigger: CCCCCTAATGACATAAACGCAGCCTTTCTTGCTGTC...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGGTGTTGCCTCAGGCCTaGTGGCCTCCTGCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: CHRAFQVEGFCILPREIQVLPQA*WPPAVN
Trigger: GTTCACAGCAGGAGGCCAGCAGGCCTGAGGCAACAC...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCCAGCTTTCCAAGAAGTaGATCCACATCGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSQLSKK*IHIVPR
Trigger: CCTGGGGACGATGTGGATGCACTTCTTGGAAAGCTG...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCAAATCTTCCTGTTCTaGCAGTACCCAGCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPQIFLF*QYPALF
Trigger: GAACAGGGCTGGGTACTGGCAGAACAGGAAGATTTG...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTAGCCATTGGCAAGAATaGCAGACTCAGAGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPSHWQE*QTQRLP
Trigger: TGGCAACCTCTGAGTCTGGCATTCTTGCCAATGGCT...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGACCTGCAAGGCTTCTTTaGCTCTGGCTAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRPARLL*LWLAPA
Trigger: AGCAGGAGCTAGCCAGAGCCAAAGAAGCCTTGCAGG...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCCGCAGTGCCGTGGCGTaGTCTGTGGCCTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: FAHCFNLKSWSELALYHFRSAVA*SVASLA
Trigger: AGCCAAGGAGGCCACAGACCACGCCACGGCACTGCG...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTAAGGACTGTTTGGCCATaGCCAGCTCGGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RRQRVDRFTHGLRYVHQLRTVWP*PARPPA
Trigger: AGCTGGAGGCCGAGCTGGCCATGGCCAAACAGTCCT...TAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGACGAAGACGCGGGAGATaGAGCCGAATCCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRRRRGR*SRIPSS
Trigger: AGAAGATGGGATTCGGCTCCATCTCCCGCGTCTTCG...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCGGATCCTTTCATGCATaGGCAGGAGAATGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFGSFHA*AGEWER
Trigger: TCTCTCCCATTCTCCTGCCCATGCATGAAAGGATCC...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACTCTTGTCTCCTGGGGTaGGTAGGCTCAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DDRELTGSHTVCGMYINYSCLLG*VGSGCC
Trigger: ACAGCAGCCTGAGCCTACCCACCCCAGGAGACAAGA...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCGAATTTCCTCCAAACTaGGTGCCACTGCAGCACATG +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFEFPPN*VPLQHM
Trigger: CATGTGCTGCAGTGGCACCCAGTTTGGAGGAAATTC...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400798.6
CDS-3UTR CCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGGTGCCCGCCTTCCAGTaGGACATAGGGGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILVPAFQ*DIGVVL
Trigger: GAGGACCACCCCTATGTCCCACTGGAAGGCGGGCAC...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACAGCAGGATGCTGACCTaGTGGAACTTCTTGGACACG +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHSRMLT*WNFLDT
Trigger: CGTGTCCAAGAAGTTCCACCAGGTCAGCATCCTGCT...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGAGTGGAGTTGGCTGGGTaGAAGACGGCGCTCATCTCC +
Preference number: 4 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGVELAG*KTALIS
Trigger: GGAGATGAGCGCCGTCTTCCACCCAGCCAACTCCAC...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGACTGGGTCTCTCACGTTaGGTCTGGTGGAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGLGLSR*VWWSHQ
Trigger: CTGGTGGCTCCACCAGACCCAACGTGAGAGACCCAG...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACGCTTCTCTTCCTTCCTaGGTCTCTCACGTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHASLPS*VSHVGS
Trigger: AGACCCAACGTGAGAGACCCAGGAAGGAAGAGAAGC...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACACGGTCACTCTGAGGTaGAGCCTGTGTATCCTGGAT +
Preference number: 4 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDTVTLR*SLCILD
Trigger: ATCCAGGATACACAGGCTCCACCTCAGAGTGACCGT...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGGCTCTGCCAATGCACTaGGCGCTGGGGTGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILALPMH*ALGCGV
Trigger: AACCCCACACCCCAGCGCCCAGTGCATTGGCAGAGC...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTGTAGCCACTCCTGGGTaGATCGGCAAACAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLVATPG*IGKQLF
Trigger: GAAGAGCTGTTTGCCGATCCACCCAGGAGTGGCTAC...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTATACCAACTAGACATTTaGTCTCAGACAGCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVYQLDI*SQTARK
Trigger: CTTTCTTGCTGTCTGAGACCAAATGTCTAGTTGGTA...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGGCAGAGTGGAAGTGGTaGTGCCCAGGACGCATGGGC +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILAEWKW*CPGRMG
Trigger: GCCCATGCGTCCTGGGCACCACCACTTCCACTCTGC...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTTCGCTGGCCAGCCATTaGCAAGAATGCCAGACTCAG +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLSLASH*QECQTQ
Trigger: CTGAGTCTGGCATTCTTGCCAATGGCTGGCCAGCGA...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACCAGCGTCCAGACCCTTaGAGTGTCAGAGCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDQRPDP*SVRAKD
Trigger: ATCCTTTGCTCTGACACTCCAAGGGTCTGGACGCTG...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTATTCCATGGCTCTTTTaGGGTCTTTGGTGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCIPWLF*GLWCWS
Trigger: TGACCAACACCAAAGACCCCAAAAGAGCCATGGAAT...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636203.1
3UTR CAA 72 bp GAGGACAGAAAAGTCCTTATGAGGGCCTCTGCCTGCTaGCTGTTTGCTGACTTTTGGACCAGGTCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: EDRKVLMRASAC*LFADFWTRSEG
Trigger: TCCTTCTGACCTGGTCCAAAAGTCAGCAAACAGCAAGCAGGCAGAGGCCCTCATAAGGACTTTTCTGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CAA 72 bp AGCCATTGGCAAGAATGCCAGACTCAGAGGTTGCCATaGCCCACAGGCTTTCTTCTCCTTTCCTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: SHWQECQTQRLP*PTGFLLLSFHS
Trigger: GCTGTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCATTCTTGCCAATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGATTGTGCAGGTTCTTCTaGACTGGGCCGGGACTGTCG +
Preference number: 4 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGLCRFF*TGPGLS
Trigger: CGACAGTCCCGGCCCAGTTCAGAAGAACCTGCACAA...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCGATTCTAAGTGTGGCTaGTGGAACCAACCAGAATGG +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFDSKCG*WNQPEW
Trigger: CCATTCTGGTTGGTTCCATCAGCCACACTTAGAATC...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACTTGGGCAGACCTTGCTaGACAGCTCACACATCCTCC +
Preference number: 4 (lower is better)
Translates to: DDRELTGSHTVCGMYINYLGRPC*TAHTSS
Trigger: GGAGGATGTGTGAGCTGTTCAGCAAGGTCTGCCCAA...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGCTGCTTGCTGTTTGCTaGCTTTTGGACCAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWLLAVC*LLDQVR
Trigger: TCTGACCTGGTCCAAAAGTCAGCAAACAGCAAGCAG...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGGATTTATATGTTTCTTaGGCCCTGTTGGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKDLYVS*ALLEAL
Trigger: AAGAGCCTCCAACAGGGCTCAAGAAACATATAAATC...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCAAACCCATCCTCATGTTaGGAAACCAGCTCCAAATGC +
Preference number: 4 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPNPSSC*ETSSKC
Trigger: GCATTTGGAGCTGGTTTCTCAACATGAGGATGGGTT...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCGCCTTCGGCGGCAGATaGGTCGGAGATGACAGAGGG +
Preference number: 4 (lower is better)
Translates to: FAHCFNLKSWSELALYHFAFGGR*VGDDRG
Trigger: CCCTCTGTCATCTCCGACGCATCTGCCGCCGAAGGC...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCTCCCGCAGGAGCACTTaGGCTCCAAGCTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: FAHCFNLKSWSELALYHFSRRST*APSWGF
Trigger: GAACCCCCAGCTTGGAGCGCAAGTGCTCCTGCGGGA...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGAGAGGCAGCACTTCCTaGACCCGGCTCTGCCAATGC +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILRGSTS*TRLCQC
Trigger: GCATTGGCAGAGCCGGGTGCAGGAAGTGCTGCCTCT...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTCAGTCAAGGGTAAGATaGTGTAGCCGAGAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLQSRVR*CSREFP
Trigger: GGGGAACTCTCGGCTACAGCATCTTACCCTTGACTG...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCAAGACCCCAAACTCATTaGCACACTCCATACCACTGT +
Preference number: 4 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPRPQTH*HTPYHC
Trigger: ACAGTGGTATGGAGTGTGGCAATGAGTTTGGGGTCT...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACTGTCAAGCATTTCCCTaGCCCAGACCCCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDCQAFP*PRPQTH
Trigger: ATGAGTTTGGGGTCTGGGGCAGGGAAATGCTTGACA...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACTGCATTCAAGTGCCCTaGTACAATTCTGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHCIQVP*YNSGSL
Trigger: GAGTGAGCCAGAATTGTAGCAGGGCACTTGAATGCA...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGAGAGGCATTCGCGGTTaGCCGTGTTGCCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILRGIRG*PCCLRP
Trigger: AGGCCTGAGGCAACACGGGCAACCGCGAATGCCTCT...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTCAGCTTGAGTCTCTCTaGCAAGTCTCCGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLQLESL*QVSAFC
Trigger: ACAGAAGGCGGAGACTTGGCAGAGAGACTCAAGCTG...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCACCAACCCATTTCCTCTaGAGCCACAAAATGCCTTTG +
Preference number: 4 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPPTHFL*SHKMPL
Trigger: CAAAGGCATTTTGTGGCTGCAGAGGAAATGGGTTGG...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACCACGGCCCTAGAAACTaGATCTTTGTTCAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDHGPRN*IFVQSQ
Trigger: TTGGCTCTGAACAAAGATGCAGTTTCTAGGGCCGTG...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACTTTGTCCTCCTCCAGTaGCTTCGACTTGGTGACAAT +
Preference number: 4 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHFVLLQ*LRLGDN
Trigger: ATTGTCACCAAGTCGAAGGCACTGGAGGAGGACAAA...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTAGGCTTCTTTGGCTCTaGCTAGCTCCTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLRLLWL*LAPAPS
Trigger: AGAAGGAGCAGGAGCTAGCCAGAGCCAAAGAAGCCT...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACCCTGCAAGGCTTCTTTaGCTCTGGCTAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DDRELTGSHTVCGMYINYPARLL*LWLAPA
Trigger: AGCAGGAGCTAGCCAGAGCCAAAGAAGCCTTGCAGG...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGACGCGGCTCTCCAGTGTaGCATACAGCTGCTGCATCT +
Preference number: 4 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGRGSPV*HTAAAS
Trigger: AGATGCAGCAGCTGTATGCCACACTGGAGAGCCGCG...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACCACTGGTCGTACCCTTaGATGTGTGGCAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: DDRELTGSHTVCGMYINYHWSYP*MCGRLS
Trigger: AGACAGCCTGCCACACATCCAAGGGTACGACCAGTG...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp AGACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTAAGGAACAGAAGCTGCTaGAGGCCCCTCGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: RRQRVDRFTHGLRYVHQLRNRSC*RPLGEQ
Trigger: CTGTTCTCCGAGGGGCCTCCAGCAGCTTCTGTTCCT...TAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAACTAACAACACCTGCCTaGCCCACCTGCATCCTAAAC +
Preference number: 4 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQLTTPA*PTCILN
Trigger: GTTTAGGATGCAGGTGGGCCAGGCAGGTGTTGTTAG...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp AGACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTAGCTGCTGTGACAAGTTaGGGGACGGAGTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: RRQRVDRFTHGLRYVHQLAAVTS*GTESKG
Trigger: TCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGC...TAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp ATGTACATCAATTACAGAGGTGGCGACGCAGGGGAGAGAGGTTCACACTCGTGTTTGAGTTTTAGGCCTTaGGCAGACCTTGCTGAACAG +
Preference number: 4 (lower is better)
Translates to: MYINYRGGDAGERGSHSCLSFRP*ADLAEQ
Trigger: CTGTTCAGCAAGGTCTGCCCAAGGCCTAAAACTCAA...ACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGCATTCAGCCAGGCCTTaGCCACCCAGTGATGGTCCA +
Preference number: 4 (lower is better)
Translates to: CHRAFQVEGFCILPREIQHSARP*PPSDGP
Trigger: TGGACCATCACTGGGTGGCCAAGGCCTGGCTGAATG...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGACAGAGCTTTTCAGGTaGAAGGATTTTGCATTCTCC +
Preference number: 4 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKTELFR*KDFAFS
Trigger: GGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGT...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACCATCTCCTAGAAATGTaGCTGCTAAGCCCCACTCCT +
Preference number: 4 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDHLLEM*LLSPTP
Trigger: AGGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATG...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGCAGAGATTCACCATATaGGGCCGTCGGTCATCCCCG +
Preference number: 4 (lower is better)
Translates to: CHRAFQVEGFCILPREIQQRFTI*GRRSSP
Trigger: CGGGGATGACCGACGGCCCCATATGGTGAATCTCTG...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTGGAGGTCGAGCATCATaGTTCCAACAAGTGACTCGC +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLGGRAS*FQQVTR
Trigger: GCGAGTCACTTGTTGGAACCATGATGCTCGACCTCC...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACAGCTTCAGGACCCTATaGATGAGGCCGAATGTCATG +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHSFRTL*MRPNVM
Trigger: CATGACATTCGGCCTCATCCATAGGGTCCTGAAGCT...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTAAAGGGGGCAGTTCCTaGGAGATATTCTGGATGCGG +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLKGGSS*EIFWMR
Trigger: CCGCATCCAGAATATCTCCCAGGAACTGCCCCCTTT...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636203.1
3UTR CAA 72 bp CAAAGACGACAGAGAGTTGACAGGTTCACACACGGTTaGCGGTATGTACATCAATTACAGAGGTGGCGACGC +
Preference number: 4 (lower is better)
Translates to: QRRQRVDRFTHG*RYVHQLQRWRR
Trigger: GCGTCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CAA 72 bp CCCTGGGTTCTGGCCACCCTAAACTACTTTGCACAGTaGGGTAGCAGCATGGTAACAGAACAGACAAGTCAA +
Preference number: 4 (lower is better)
Translates to: PWVLATLNYFAQ*GSSMVTEQTSQ
Trigger: TTGACTTGTCTGTTCTGTTACCATGCTGCTACCCAACTGTGCAAAGTAGTTTAGGGTGGCCAGAACCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CAA 72 bp CCGCCTTCTGTTCTTCTTGCCGACCTTGAAGCAGAGTaGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: PPSVLLADLEAE*TFQVFPADKAH
Trigger: GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGCAAGAAGAACAGAAGGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAACAGGCTGTCTTGCCCTaGACTCAACCTCTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQQAVLP*TQPLSK
Trigger: TTTTGAGAGAGGTTGAGTTCAGGGCAAGACAGCCTG...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGATTCTAAGTGTGGCTaGTGGAACCAACCAGAATGG +
Preference number: 4 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWDSKCG*WNQPEW
Trigger: CCATTCTGGTTGGTTCCATCAGCCACACTTAGAATC...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCTGTCTCGAACCCACTTaGGCACCCGCTGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: FAHCFNLKSWSELALYHFCLEPT*APAGWS
Trigger: GGACCAACCAGCGGGTGCTCAAGTGGGTTCGAGACA...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGGGCCAGCCTTGTACTTaGGACCGCTGCTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILGQPCT*DRCCSP
Trigger: AGGAGAACAGCAGCGGTCTCAAGTACAAGGCTGGCC...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTCTTCCCATTGTCTCCTaGGAGGTTACAAATTGTGTT +
Preference number: 4 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVALPIVS*EVTNCV
Trigger: AACACAATTTGTAACCTCTCAGGAGACAATGGGAAG...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGATGAAGTCTCGGAGCTaGTCCTCGCGGCTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILMKSRS*SSRLSS
Trigger: ACTGGAGAGCCGCGAGGAGCAGCTCCGAGACTTCAT...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACATCCTCGCTCTCCTTaGGGTGCTGCTCATAGTTGC +
Preference number: 4 (lower is better)
Translates to: RRQRVDRFTHGLRYVHQLHPRSP*GAAHSC
Trigger: GCAACTATGAGCAGCACCGCAAGGAGAGCGAGGATG...TAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAATGGAGGATCCTTTCATaGATGGGCAGGAGAATGGGA +
Preference number: 4 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQWRILS*MGRRMG
Trigger: TCCCATTCTCCTGCCCATGCATGAAAGGATCCTCCA...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACGACAGCAAGAAAGGCTaGGTTTATGTCATTAGGGGG +
Preference number: 4 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDDSKKG*VYVIRG
Trigger: CCCCCTAATGACATAAACGCAGCCTTTCTTGCTGTC...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGAGCACGTTGCTGTTGCTaGCTCCCAAACGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGARCCC*LPNGSF
Trigger: GAAACTGCCGTTTGGGAGGCAGCAACAGCAACGTGC...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTCAAATCTTCCTGTTCTaGCAGTACCCAGCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLQIFLF*QYPALF
Trigger: GAACAGGGCTGGGTACTGGCAGAACAGGAAGATTTG...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGAGAGTCCAAGGGATCCTaGGAGATTCTAAGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRESKGS*EILSVA
Trigger: AGCCACACTTAGAATCTCCCAGGATCCCTTGGACTC...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGAAGACGAGAGAAAGCCTaGAGTCCCCACCTTCATAGA +
Preference number: 4 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRRREKA*SPHLHR
Trigger: TCTATGAAGGTGGGGACTCCAGGCTTTCTCTCGTCT...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400798.6
CDS-3UTR CCA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGACATGGACGCCGCTGTTaGTCAGGTTGTCTGCGTACT +
Preference number: 4 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGHGRRC*SGCLRT
Trigger: AGTACGCAGACAACCTGACCAACAGCGGCGTCCATG...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGTGTTTTAGGGAACTGTaGGCCTCCTCCCACCTTGGC +
Preference number: 4 (lower is better)
Translates to: CHRAFQVEGFCILPREIQCFREL*ASSHLG
Trigger: GCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACA...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCAGGCTTGAGTCAAACTaGTTTTCAAGGCTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GSANSSSIRPPPCVTELFRLESN*FSRLCS
Trigger: TGAGCACAGCCTTGAAAACCAGTTTGACTCAAGCCT...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACACCTGTTGTGAATCTTaGAAACTCAAGCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHTCCES*KLKPQC
Trigger: GCACTGGGGCTTGAGTTTCCAAGATTCACAACAGGT...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGCAGAGATTCACCACCTaGGGCCCAGGATCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: CHRAFQVEGFCILPREIQQRFTT*GPGSEV
Trigger: CACTTCTGATCCTGGGCCCCAGGTGGTGAATCTCTG...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGCTCCTTTCTGAGCTGTaGACTGCAGCTTCAGGACCC +
Preference number: 4 (lower is better)
Translates to: CHRAFQVEGFCILPREIQLLSEL*TAASGP
Trigger: GGGTCCTGAAGCTGCAGTCCACAGCTCAGAAAGGAG...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTCCATTTCTGACAAGTTaGGTGAACGTTGGTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCPFLTS*VNVGFK
Trigger: TTTGAAACCAACGTTCACCCAACTTGTCAGAAATGG...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGACCTCGAAAAGCAGAGTaGAAGTGGTGGTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGPRKAE*KWWCPG
Trigger: TCCTGGGCACCACCACTTCCACTCTGCTTTTCGAGG...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTTCCTGGGAGATATTCTaGATGCGGAGGGAAGTGCTA +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLSWEIF*MRREVL
Trigger: TAGCACTTCCCTCCGCATCCAGAATATCTCCCAGGA...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636203.1
3UTR CAA 72 bp GGAGGCCAAACATCCACCTGTCTACCAACTAGACATTaGGTCTCAGACAGCAAGAAAGGCTGCGTTTATGTC +
Preference number: 4 (lower is better)
Translates to: GGQTSTCLPTRH*VSDSKKGCVYV
Trigger: GACATAAACGCAGCCTTTCTTGCTGTCTGAGACCAAATGTCTAGTTGGTAGACAGGTGGATGTTTGGCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp AGACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTAAGCCGGTTTGACCTCTaGCAAACCCAGCCAAGACAA +
Preference number: 4 (lower is better)
Translates to: RRQRVDRFTHGLRYVHQLSRFDL*QTQPRQ
Trigger: TTGTCTTGGCTGGGTTTGTCAGAGGTCAAACCGGCT...TAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGACTAACTGGCCTCTCTTaGAGGCATCCAAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRLTGLS*RHPKSR
Trigger: TCTGCTTTTTGGATGCCTTCAAGAGAGGCCAGTTAG...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400798.6
CDS-3UTR TCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCCGGTTAGGACATTGGTaGGCTATGTCACCTATGTTT +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSRLGHW*AMSPMF
Trigger: AAACATAGGTGACATAGCTCACCAATGTCCTAACCG...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCCTTCCCATTGTCTCCTaGGAGGTTACAAATTGTGTT +
Preference number: 4 (lower is better)
Translates to: GSANSSSIRPPPCVTELFLPIVS*EVTNCV
Trigger: AACACAATTTGTAACCTCTCAGGAGACAATGGGAAG...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCACCTTGAAGCAGAGTTaGCGTTTCAGGTTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSTLKQS*RFRFFQ
Trigger: CTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGT...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACACCTTGAAGCAGAGTTaGCGTTTCAGGTTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDTLKQS*RFRFFQ
Trigger: CTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGT...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACTCAGCTTTCATGGCCTaGAAGGCTTCTTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DDRELTGSHTVCGMYINYSAFMA*KASLAL
Trigger: CAGAGCCAAAGAAGCCTTGCAGGCCATGAAAGCTGA...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACTGGAGGATCCTTTCATaGATGGGCAGGAGAATGGGA +
Preference number: 4 (lower is better)
Translates to: DDRELTGSHTVCGMYINYWRILS*MGRRMG
Trigger: TCCCATTCTCCTGCCCATGCATGAAAGGATCCTCCA...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACATGAGGGCCTCTGCCTaGTTGCTGTTTGCTGACTTT +
Preference number: 4 (lower is better)
Translates to: DDRELTGSHTVCGMYINYMRASA*LLFADF
Trigger: AAAGTCAGCAAACAGCAAGCAGGCAGAGGCCCTCAT...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACCAGGTGGAAGGATTTTaGATTCTCCCAAGAGAGATT +
Preference number: 4 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHQVEGF*ILPREI
Trigger: AATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTG...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCACTTCCTTTTGCACACTaGTTCAACCTAAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPLPFAH*FNLKSW
Trigger: CCAACTCTTTAGGTTGAAGCAGTGTGCAAAAGGAAG...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCTGTCAGAGCAAAGGATaGCGTCGCTGGCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: FAHCFNLKSWSELALYHFCQSKG*RRWPRN
Trigger: GTTCCTGGGCCAGCGACGGCATCCTTTGCTCTGACA...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CCA 90 bp AGACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTATACAGCTGCTGCATCTaGCTCACCAGGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RRQRVDRFTHGLRYVHQLYSCCI*LTRSVF
Trigger: GAAGACAGACCTGGTGAGCCAGATGCAGCAGCTGTA...TAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACCCAGGAGTAGCGGTTTaGACGAGGGACATTTACAAG +
Preference number: 4 (lower is better)
Translates to: DDRELTGSHTVCGMYINYPGVAV*TRDIYK
Trigger: CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGG...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGATTGAGTTTTAGGCCTTaGGCAGACCTTGCTGAACAG +
Preference number: 4 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRLSFRP*ADLAEQ
Trigger: CTGTTCAGCAAGGTCTGCCCAAGGCCTAAAACTCAA...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CCA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGTTGATATCCTCTAACTaGCCTCTCTTGAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWLISSN*PLLKAS
Trigger: GGATGCCTTCAAGAGAGGCCAGTTAGAGGATATCAA...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400798.6
CDS-3UTR CCA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGAAAGGCCTGGGAGTACTaGGACAGGCCAATGTCATTC +
Preference number: 4 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGKAWEY*DRPMSF
Trigger: GAATGACATTGGCCTGTCCCAGTACTCCCAGGCCTT...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTACAGAGCTTTTCAGGTaGAAGGATTTTGCATTCTCC +
Preference number: 4 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPTELFR*KDFAFS
Trigger: GGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGT...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGTTCAACCTAAAGAGTTaGAGCGAACTAGCTCTATAT +
Preference number: 4 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKFNLKS*SELALY
Trigger: ATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAA...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACAGGCTTGAGTCAAACTaGTTTTCAAGGCTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDRLESN*FSRLCS
Trigger: TGAGCACAGCCTTGAAAACCAGTTTGACTCAAGCCT...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAAAAGTTGGGTGAACGTTaGTTTCAAATCATCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LSCGLQLQDPMDEAECHEKLGER*FQIISS
Trigger: AGAGCTGATGATTTGAAACCAACGTTCACCCAACTT...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGGGATGGGGAGCCTCATaGGTGAAAGAGGGTTGTGAT +
Preference number: 4 (lower is better)
Translates to: CHRAFQVEGFCILPREIQGWGAS*VKEGCD
Trigger: ATCACAACCCTCTTTCACCCATGAGGCTCCCCATCC...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCCCCTCCTCTGCAGCCTaGGGTCTGAAAACAGCGATG +
Preference number: 4 (lower is better)
Translates to: FAHCFNLKSWSELALYHFPSSAA*GLKTAM
Trigger: CATCGCTGTTTTCAGACCCCAGGCTGCAGAGGAGGG...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACAAACCCTATAAGCCTTaGCAAATCTTGCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDKPYKP*QILHSS
Trigger: GCTGCTGTGCAAGATTTGCCAAGGCTTATAGGGTTT...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR TCA 90 bp AGACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTATTAAAAGAGCCGGTTTaGCCTCTGACAAACCCAGCC +
Preference number: 4 (lower is better)
Translates to: RRQRVDRFTHGLRYVHQLLKEPV*PLTNPA
Trigger: GGCTGGGTTTGTCAGAGGTCAAACCGGCTCTTTTAA...TAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGAAGAAAAAGCAAGCTTTaGAATCCAATGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRRKSKL*NPMVPG
Trigger: CCCAGGGACCATTGGATTTCAAAGCTTGCTTTTTCT...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCAGTGTTGTTTGTTCTTaGGACTTTGGACACAATGTC +
Preference number: 4 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFSVVCS*DFGHNV
Trigger: GACATTGTGTCCAAAGTCTCAAGAACAAACAACACT...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACCCCACCAATACCAAATaGTTTTGCTCTGTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHPTNTK*FCSVEF
Trigger: AAACTCCACAGAGCAAAATCATTTGGTATTGGTGGG...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCCCCACCAATACCAAATaGTTTTGCTCTGTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSPTNTK*FCSVEF
Trigger: AAACTCCACAGAGCAAAATCATTTGGTATTGGTGGG...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCGGCTCTTGGCAGGTCTaGACATTAAACATTTCTTTT +
Preference number: 4 (lower is better)
Translates to: GSANSSSIRPPPCVTELFGSWQV*TLNISF
Trigger: AAAAGAAATGTTTAATGTTCAGACCTGCCAAGAGCC...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCGATTTATATGTTTCTTaGGCCCTGTTGGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSDLYVS*ALLEAL
Trigger: AAGAGCCTCCAACAGGGCTCAAGAAACATATAAATC...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGCTGTCATCTGGTCAATaGACTGAGGCCCGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILLSSGQ*TEARRL
Trigger: AAGCCTTCGGGCCTCAGTTCATTGACCAGATGACAG...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCCAGTGCAAACGGCCTTaGAGGAGGTCGAGCATCATG +
Preference number: 4 (lower is better)
Translates to: FAHCFNLKSWSELALYHFQCKRP*RRSSIM
Trigger: CATGATGCTCGACCTCCTTCAAGGCCGTTTGCACTG...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGGCTGGCCTCCTGCTGTaGACATTTTGGGCAATACTG +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILAGLLL*TFWAIL
Trigger: CAGTATTGCCCAAAATGTTCACAGCAGGAGGCCAGC...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCAGTGTGGCATACAGCTaGTGCATCTGGCTCACCAGG +
Preference number: 4 (lower is better)
Translates to: FAHCFNLKSWSELALYHFSVAYS*CIWLTR
Trigger: CCTGGTGAGCCAGATGCAGCAGCTGTATGCCACACT...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGTTGGACACGTTCAGGTaGTTCTCCAGGTCTCGCTTC +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILLDTFR*FSRSRF
Trigger: GAAGCGAGACCTGGAGAAGCACCTGAACGTGTCCAA...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGAGTCCATCGGGATTTTaGCCAGGAGCAAGGGACATC +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILSPSGF*PGARDI
Trigger: GATGTCCCTTGCTCCTGGGCAAAATCCCGATGGACT...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACCAGGTGGAAGGATTTTaGATTCTCCCAAGAGAGATT +
Preference number: 4 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDQVEGF*ILPREI
Trigger: AATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTG...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCGGCCTGCTGGCCTCCTaGTGTGAACATTTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: FAHCFNLKSWSELALYHFGLLAS*CEHFGQ
Trigger: TTGCCCAAAATGTTCACAGCAGGAGGCCAGCAGGCC...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGAGCAGGATGCTGACCTaGTGGAACTTCTTGGACACG +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILSRMLT*WNFLDT
Trigger: CGTGTCCAAGAAGTTCCACCAGGTCAGCATCCTGCT...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCAAGTTGGGTGAACGTTaGTTTCAAATCATCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GSANSSSIRPPPCVTELFKLGER*FQIISS
Trigger: AGAGCTGATGATTTGAAACCAACGTTCACCCAACTT...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCTTCTCTCCACTTTATTaGGTCCAGATTGTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSFSPLY*VQIVVW
Trigger: CCACACAACAATCTGGACCCAATAAAGTGGAGAGAA...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCGCCTCATCAATATCATaGAACTCTTCAGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSASSIS*NSSESP
Trigger: AGGAGACTCTGAAGAGTTCCATGATATTGATGAGGC...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR TCA 90 bp AGACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTAGGGAATTGCCACAATTaGTATCCTCTAACTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RRQRVDRFTHGLRYVHQLGNCHN*YPLTGL
Trigger: GAGGCCAGTTAGAGGATATCAATTGTGGCAATTCCC...TAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400798.6
CDS-3UTR TCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCTTCCTTACACGTTGGTaGCCTCCAGGCTGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: FAHCFNLKSWSELALYHFFLTRW*PPGCCS
Trigger: GCTACAACAGCCTGGAGGTCACCAACGTGTAAGGAA...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACGGCTCTTGGCAGGTCTaGACATTAAACATTTCTTTT +
Preference number: 4 (lower is better)
Translates to: ADLEAELTFQVFPADKAHGSWQV*TLNISF
Trigger: AAAAGAAATGTTTAATGTTCAGACCTGCCAAGAGCC...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGAGGACACAATGTCCTATaGCTTCTGATAGAGATACTC +
Preference number: 4 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRGHNVL*LLIEIL
Trigger: GAGTATCTCTATCAGAAGGCATAGGACATTGTGTCC...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR GCA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCTGGTTTTCAAGGCTGTaGTCATGGGATTTATATGTT +
Preference number: 4 (lower is better)
Translates to: GSANSSSIRPPPCVTELFWFSRL*SWDLYV
Trigger: AACATATAAATCCCATGAGCACAGCCTTGAAAACCA...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCATGGTTTTCAAGGCTGTaGTCATGGGATTTATATGTT +
Preference number: 4 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPWFSRL*SWDLYV
Trigger: AACATATAAATCCCATGAGCACAGCCTTGAAAACCA...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGATGCATTCAAGTGCCCTaGTACAATTCTGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGCIQVP*YNSGSL
Trigger: GAGTGAGCCAGAATTGTAGCAGGGCACTTGAATGCA...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCAGTGAGAACGACACCTaGGGCCATCTGGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: FAHCFNLKSWSELALYHFSENDT*GHLASL
Trigger: AAGAGAAGCCAGATGGCCCCAGGTGTCGTTCTCACT...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCATTCAACCTAAAGAGTTaGAGCGAACTAGCTCTATAT +
Preference number: 4 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPFNLKS*SELALY
Trigger: ATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAA...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCTTTCTTGAGCCCTGTTaGAGGCTCTTGGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: FAHCFNLKSWSELALYHFFLEPC*RLLAGL
Trigger: CAGACCTGCCAAGAGCCTCCAACAGGGCTCAAGAAA...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCGTCCAGATTGTTGTGTaGCTTCTCCCCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: FAHCFNLKSWSELALYHFVQIVV*LLPSSA
Trigger: TGCAGAGGAGGGGAGAAGCCACACAACAATCTGGAC...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 72 bp ATTTTGCTCTGTGGAGTTTGTGTCTCGGTTAGGACATaGGTGAGCTATGTCACCTATGTTTCAGGTGACAGG +
Preference number: 4 (lower is better)
Translates to: ILLCGVCVSVRT*VSYVTYVSGDR
Trigger: CCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGACACAAACTCCACAGAGCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAAAGTGTTGTTTGTTCTTaGGACTTTGGACACAATGTC +
Preference number: 4 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQSVVCS*DFGHNV
Trigger: GACATTGTGTCCAAAGTCTCAAGAACAAACAACACT...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR TCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGTCTTCTTGCCGACCTTaGAGCAGAGTTGACGTTTCA +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILSSCRP*SRVDVS
Trigger: TGAAACGTCAACTCTGCTTCAAGGTCGGCAAGAAGA...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCGTTGGTCAGGTTGTCTaGGTACTCCTTCAGGTCGAT +
Preference number: 4 (lower is better)
Translates to: FAHCFNLKSWSELALYHFVGQVV*VLLQVD
Trigger: ATCGACCTGAAGGAGTACGCAGACAACCTGACCAAC...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGAGACCCCAAACTCATTaGCACACTCCATACCACTGT +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILRPQTH*HTPYHC
Trigger: ACAGTGGTATGGAGTGTGGCAATGAGTTTGGGGTCT...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTCCATTTCTGACAAGTTaGGTGAACGTTGGTTTCAAA +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLPFLTS*VNVGFK
Trigger: TTTGAAACCAACGTTCACCCAACTTGTCAGAAATGG...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 72 bp GCTGACTTTTGGACCAGGTCAGAAGGAAAGTGTTGTTaGTTCTTGAGACTTTGGACACAATGTCCTATGCCT +
Preference number: 4 (lower is better)
Translates to: ADFWTRSEGKCC*FLRLWTQCPMP
Trigger: AGGCATAGGACATTGTGTCCAAAGTCTCAAGAACAAACAACACTTTCCTTCTGACCTGGTCCAAAAGTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CAA 72 bp GCAAGATCGAACCATGTAAGTGCCATTTCTGACAAGTaGGGTGAACGTTGGTTTCAAATCATCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ARSNHVSAISDK*GERWFQIISSA
Trigger: TGCAGAGCTGATGATTTGAAACCAACGTTCACCCAACTTGTCAGAAATGGCACTTACATGGTTCGATCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGCACCTATGTTTCAGGTaGCAGGGACATCACAACAAA +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILHLCFR*QGHHNK
Trigger: TTTGTTGTGATGTCCCTGTCACCTGAAACATAGGTG...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR TCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCCAGAAGTATCGTAGATaGAGACATCGAGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: FAHCFNLKSWSELALYHFQKYRR*RHRGTE
Trigger: CTCTGTGCCTCGATGTCTTCATCTACGATACTTCTG...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGTCAAATCATCAGCTCTaGATTCAAGTGCCCTGCTAC +
Preference number: 4 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILSNHQL*IQVPCY
Trigger: GTAGCAGGGCACTTGAATGCAGAGCTGATGATTTGA...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR GCA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCCCAACCCATTTCCTCTaGAGCCACAAAATGCCTTTG +
Preference number: 4 (lower is better)
Translates to: FAHCFNLKSWSELALYHFPTHFL*SHKMPL
Trigger: CAAAGGCATTTTGTGGCTGCAGAGGAAATGGGTTGG...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCACAACAAAGGTTTGTTaGGTTAACAATGTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: SGDRISASPRNVAAKPHSTTKVC*VNNVKH
Trigger: ATGCTTGACATTGTTAACCCAACAAACCTTTGTTGT...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CCA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTATAAAATGGGAAATCTaGTCATTGAGGGTGTGCAAT +
Preference number: 4 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLIKWEI*SLRVCN
Trigger: ATTGCACACCCTCAATGACCAGATTTCCCATTTTAT...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636203.1
3UTR CAA 72 bp TTTTGGACCAGGTCAGAAGGAAAGTGTTGTTTGTTCTaGAGACTTTGGACACAATGTCCTATGCCTTCTGAT +
Preference number: 4 (lower is better)
Translates to: FWTRSEGKCCLF*RLWTQCPMPSD
Trigger: ATCAGAAGGCATAGGACATTGTGTCCAAAGTCTCAAGAACAAACAACACTTTCCTTCTGACCTGGTCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
3UTR CAA 72 bp GGGATTTATATGTTTCTTGAGCCCTGTTGGAGGCTCTaGGCAGGTCTGAACATTAAACATTTCTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GIYMFLEPCWRL*AGLNIKHFFSS
Trigger: GGAAGAAAAGAAATGTTTAATGTTCAGACCTGCCAAGAGCCTCCAACAGGGCTCAAGAAACATATAAATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
3UTR CAA 72 bp TTTTCTTCCTTTTGCACACTGCTTCAACCTAAAGAGTaGGAGCGAACTAGCTCTATATCATTTCTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: FSSFCTLLQPKE*ERTSSISFLCC
Trigger: ACAACACAGAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAAAGGAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 90 bp ACCAGGGCTCTCAGTCCGGCCGGACGCCGGGCGGTCCGCGCCTGCTaGACGCGAGGAATTCGGCCGCGGAGCCTCTCACGTGGGAACGGC +
Preference number: 5 (lower is better)
Translates to: TRALSPAGRRAVRAC*TRGIRPRSLSRGNG
Trigger: GCCGTTCCCACGTGAGAGGCTCCGCGGCCGAATTCCTCGCGTGCAGCAGGCGCGGACCGCCCGGCGTCCGGCCGGACTGAGAGCCCTGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361144.9
CDS GCA 90 bp CGGACCAGGGCTCTCAGTCCGGCCGGACGCCGGGCGGTCCGCGCCTaGTGCACGCGAGGAATTCGGCCGCGGAGCCTCTCACGTGGGAAC +
Preference number: 5 (lower is better)
Translates to: RTRALSPAGRRAVRA*CTRGIRPRSLSRGN
Trigger: GTTCCCACGTGAGAGGCTCCGCGGCCGAATTCCTCGCGTGCAGCAGGCGCGGACCGCCCGGCGTCCGGCCGGACTGAGAGCCCTGGTCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361144.9
CDS GCA 90 bp AGCTCAGCCCCGGCTGTGTTCCAGCACCAGCTGCCGGCAGAGCGCTaGCCAGGCCCCGCGGCGTCTCAGTCCAGGGAGGCAGGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: SSAPAVFQHQLPAER*PGPAASQSREAGRA
Trigger: CGCCCTGCCTGCCTCCCTGGACTGAGACGCCGCGGGGCCTGGGCAGCGCTCTGCCGGCAGCTGGTGCTGGAACACAGCCGGGGCTGAGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS GCA 90 bp CCGCAGGCGTCTCCGGCTCATCCTCCACTCGGGACGCCTAGGCCCTaGCGCTCCCCACTCCTCGCGTGGCAGCAGGGAGGGACTGAGACC +
Preference number: 5 (lower is better)
Translates to: PQASPAHPPLGTPRP*RSPLLAWQQGGTET
Trigger: GGTCTCAGTCCCTCCCTGCTGCCACGCGAGGAGTGGGGAGCGGCAGGGCCTAGGCGTCCCGAGTGGAGGATGAGCCGGAGACGCCTGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS TCA 90 bp GGCCGCCGCCGCCGCTCAGTTCCGCCAGTCTCCGGTTGGTGGCCGTaGGTTCGGCTCGCAGGTTGGTCACCTCCTGGCTGGCCGACTGGA +
Preference number: 5 (lower is better)
Translates to: GRRRRSVPPVSGWWP*VRLAGWSPPGWPTG
Trigger: TCCAGTCGGCCAGCCAGGAGGTGACCAACCTGCGAGCCGAACTCACGGCCACCAACCGGAGACTGGCGGAACTGAGCGGCGGCGGCGGCC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376030.7
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS GCA 90 bp GACCGGTCGCCTTCGGCGGCAGATGCGTCGGAGATGACAGAGGGCTaGCGGGAGTGGCAGGGGCTCACCCTGACCGCTTGCCGGTCCGCA +
Preference number: 5 (lower is better)
Translates to: DRSPSAADASEMTEG*REWQGLTLTACRSA
Trigger: TGCGGACCGGCAAGCGGTCAGGGTGAGCCCCTGCCACTCCCGGCAGCCCTCTGTCATCTCCGACGCATCTGCCGCCGAAGGCGACCGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CCA 90 bp CTCCGGTTGGTGGCCGTGAGTTCGGCTCGCAGGTTGGTCACCTCCTaGCTGGCCGACTGGACCGCCCCATCGATGCGGAGCGCGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LRLVAVSSARRLVTS*LADWTAPSMRSASC
Trigger: GCAGCTCGCGCTCCGCATCGATGGGGCGGTCCAGTCGGCCAGCCAGGAGGTGACCAACCTGCGAGCCGAACTCACGGCCACCAACCGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376030.7
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS-3UTR CAA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCCCCGGCTCTACCTGTaGTGTCCTCCGCGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFPRLYL*CPPRPG
Trigger: GCCGGGCCGCGGAGGACACAACAGGTAGAGCCGGGG...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376030.7
CDS TCA 90 bp CGGTCAGCGGGAGGTCCGCCTGCACCACCCACTCCTGGTTGCCATTaGGCACCGTCTCGCCCGGCATGGCGAGGGAATGCCGCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: RSAGGPPAPPTPGCH*APSRPAWRGNAAWG
Trigger: TCCCCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGTGGGTGGTGCAGGCGGACCTCCCGCTGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS GCA 90 bp CACTTGAGCACCCGCTGGTTGGTCCACACCACGGGGTCAATGTTCTaGGTCTCGCAGCGGGCCCGGCGCTCCTGGAGGGCCTCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: HLSTRWLVHTTGSMF*VSQRARRSWRASLL
Trigger: CAGCAGGGAGGCCCTCCAGGAGCGCCGGGCCCGCTGCGAGACGCAGAACATTGACCCCGTGGTGTGGACCAACCAGCGGGTGCTCAAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 90 bp ACGGTCCCAGACAGGGCCCACTGGGGCAGAGTTCCAGGCTGTGCCTaGGGCCGACCCAGGCCCGCTTCCTCTGGATTCTCCTCACCCTCC +
Preference number: 5 (lower is better)
Translates to: TVPDRAHWGRVPGCA*GRPRPASSGFSSPS
Trigger: GGAGGGTGAGGAGAATCCAGAGGAAGCGGGCCTGGGTCGGCCGCAGGCACAGCCTGGAACTCTGCCCCAGTGGGCCCTGTCTGGGACCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 90 bp CGGATGGCTGCGGTCAGCGGGAGGTCCGCCTGCACCACCCACTCCTaGTTGCCATTGAGCACCGTCTCGCCCGGCATGGCGAGGGAATGC +
Preference number: 5 (lower is better)
Translates to: RMAAVSGRSACTTHS*LPLSTVSPGMAREC
Trigger: GCATTCCCTCGCCATGCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGTGGGTGGTGCAGGCGGACCTCCCGCTGACCGCAGCCATCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CCA 90 bp GCCATCACCACCTCCAGCCAGGCCTGGACGGTGCCCGCCTTCCAGTaGGACATAGGGGTGGTCCTCACCAGCTCCACCTGCTGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: AITTSSQAWTVPAFQ*DIGVVLTSSTCCSR
Trigger: CCGGCTGCAGCAGGTGGAGCTGGTGAGGACCACCCCTATGTCCCACTGGAAGGCGGGCACCGTCCAGGCCTGGCTGGAGGTGGTGATGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 90 bp GTTGATGTCGCTCGGTGTGGACGACCGGTCGCCTTCGGCGGCAGATaGGTCGGAGATGACAGAGGGCTGCCGGGAGTGGCAGGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: VDVARCGRPVAFGGR*VGDDRGLPGVAGAH
Trigger: GTGAGCCCCTGCCACTCCCGGCAGCCCTCTGTCATCTCCGACGCATCTGCCGCCGAAGGCGACCGGTCGTCCACACCGAGCGACATCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS GCA 90 bp ATAGGGGTGGTCCTCACCAGCTCCACCTGCTGCAGCCGGTCCATCTaGTCCTCGCCTTCCGACAGGCTGAGGCTCTGCCGCGTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: IGVVLTSSTCCSRSI*SSPSDRLRLCRVGL
Trigger: CAGCCCCACGCGGCAGAGCCTCAGCCTGTCGGAAGGCGAGGAGCAGATGGACCGGCTGCAGCAGGTGGAGCTGGTGAGGACCACCCCTAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCGCTCACCCTGACCGCTaGCCGGTCCGCAGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGAHPDR*PVRRVR
Trigger: CCTCACCCTGCGGACCGGCAAGCGGTCAGGGTGAGC...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS TCA 90 bp CTTTGGCTCTGGCTAGCTCCTGCTCCTTCTGGGCCAGCTGGACCCTaGGCTCGGTGGCCGAGAGGACCTCAGAGGACTTGCCGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: LWLWLAPAPSGPAGP*ARWPRGPQRTCRPA
Trigger: CGCAGGGCGGCAAGTCCTCTGAGGTCCTCTCGGCCACCGAGCTCAGGGTCCAGCTGGCCCAGAAGGAGCAGGAGCTAGCCAGAGCCAAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361144.9
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS TCA 90 bp CCACCTGCTGCAGCCGGTCCATCTGCTCCTCGCCTTCCGACAGGCTaGGGCTCTGCCGCGTGGGGCTGCACTGGCTGTCCGAGTCATCAA +
Preference number: 5 (lower is better)
Translates to: PPAAAGPSAPRLPTG*GSAAWGCTGCPSHQ
Trigger: TTGATGACTCGGACAGCCAGTGCAGCCCCACGCGGCAGAGCCTCAGCCTGTCGGAAGGCGAGGAGCAGATGGACCGGCTGCAGCAGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 90 bp CAGCTCCTTCATCCGGTTGTCCTTGAGGTCCAGCTGGGAGCGCAGTaGCGTGGCGTGGTCTGTGGCCTCCTTGGCTTGGCGCCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: QLLHPVVLEVQLGAQ*RGVVCGLLGLAPQL
Trigger: GAGCTGCGGCGCCAAGCCAAGGAGGCCACAGACCACGCCACGGCACTGCGCTCCCAGCTGGACCTCAAGGACAACCGGATGAAGGAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361144.9
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS GCA 90 bp TGCAGCCGGTCCATCTGCTCCTCGCCTTCCGACAGGCTGAGGCTCTaGCGCGTGGGGCTGCACTGGCTGTCCGAGTCATCAAAGAGGCCG +
Preference number: 5 (lower is better)
Translates to: CSRSICSSPSDRLRL*RVGLHWLSESSKRP
Trigger: CGGCCTCTTTGATGACTCGGACAGCCAGTGCAGCCCCACGCGGCAGAGCCTCAGCCTGTCGGAAGGCGAGGAGCAGATGGACCGGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 90 bp CCCGCCTTCCAGTGGGACATAGGGGTGGTCCTCACCAGCTCCACCTaGTGCAGCCGGTCCATCTGCTCCTCGCCTTCCGACAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: PAFQWDIGVVLTSST*CSRSICSSPSDRLR
Trigger: CCTCAGCCTGTCGGAAGGCGAGGAGCAGATGGACCGGCTGCAGCAGGTGGAGCTGGTGAGGACCACCCCTATGTCCCACTGGAAGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CCA 90 bp GCCCGCGCCGCCACCCCGGTGCGGCGATGCAAAGGGGGCAGTTCCTaGGAGATATTCTGGATGCGGAGGGAAGTGCTAACTCAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: ARAATPVRRCKGGSS*EIFWMRREVLTQPS
Trigger: GCTGGGCTGAGTTAGCACTTCCCTCCGCATCCAGAATATCTCCCAGGAACTGCCCCCTTTGCATCGCCGCACCGGGGTGGCGGCGCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS TCA 90 bp GACTGTCGCCGTTGCAGAGGGAGTGTGTCCGGTGTCGAGGGGAGTTaGTGTCGCTCGGTGTGGACGACCGGTCGCCTTCGGCGGCAGATG +
Preference number: 5 (lower is better)
Translates to: DCRRCRGSVSGVEGS*CRSVWTTGRLRRQM
Trigger: CATCTGCCGCCGAAGGCGACCGGTCGTCCACACCGAGCGACATCAACTCCCCTCGACACCGGACACACTCCCTCTGCAACGGCGACAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000503743.5
ENST00000636203.1
CDS TCA 90 bp GCTTCCCACTGGGGATGCCCAGGGCAGTGGCCATGGCCTCGGCATTaGATGTGGGCTCCAGCACCAGCACAGCACCATGGACGCCGCTGT +
Preference number: 5 (lower is better)
Translates to: ASHWGCPGQWPWPRH*MWAPAPAQHHGRRC
Trigger: ACAGCGGCGTCCATGGTGCTGTGCTGGTGCTGGAGCCCACATTCAATGCCGAGGCCATGGCCACTGCCCTGGGCATCCCCAGTGGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 90 bp TGGAAGACGGCGCTCATCTCCTCTGCCAGGTGTCTCCGGAGGATGTaGTTCCCACTGGGGATGCCCAGGGCAGTGGCCATGGCCTCGGCA +
Preference number: 5 (lower is better)
Translates to: WKTALISSARCLRRM*FPLGMPRAVAMASA
Trigger: TGCCGAGGCCATGGCCACTGCCCTGGGCATCCCCAGTGGGAAGCACATCCTCCGGAGACACCTGGCAGAGGAGATGAGCGCCGTCTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 90 bp CCGGCCAGCCTTGTACTTGAGACCGCTGCTGTTCTCCTCCTTTCCTaGCCGCGTGACGCTGGAGGCCCTGCCAGGGGGCGTTCCAAAACG +
Preference number: 5 (lower is better)
Translates to: PASLVLETAAVLLLS*PRDAGGPARGRSKT
Trigger: CGTTTTGGAACGCCCCCTGGCAGGGCCTCCAGCGTCACGCGGGCAGGAAAGGAGGAGAACAGCAGCGGTCTCAAGTACAAGGCTGGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CCA 90 bp ATCCGGTTGTCCTTGAGGTCCAGCTGGGAGCGCAGTGCCGTGGCGTaGTCTGTGGCCTCCTTGGCTTGGCGCCGCAGCTCCCACTTCTCA +
Preference number: 5 (lower is better)
Translates to: IRLSLRSSWERSAVA*SVASLAWRRSSHFS
Trigger: TGAGAAGTGGGAGCTGCGGCGCCAAGCCAAGGAGGCCACAGACCACGCCACGGCACTGCGCTCCCAGCTGGACCTCAAGGACAACCGGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361144.9
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CCA 90 bp GCCGTGAGTTCGGCTCGCAGGTTGGTCACCTCCTGGCTGGCCGACTaGACCGCCCCATCGATGCGGAGCGCGAGCTGCTTATTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: AVSSARRLVTSWLAD*TAPSMRSASCLLSS
Trigger: GGAAGACAATAAGCAGCTCGCGCTCCGCATCGATGGGGCGGTCCAGTCGGCCAGCCAGGAGGTGACCAACCTGCGAGCCGAACTCACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376030.7
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS-3UTR CAA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCTGTGGCCTCCTTGGCTaGGCGCCGCAGCTCCCACTT +
Preference number: 5 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGCGLLG*APQLPL
Trigger: AAGTGGGAGCTGCGGCGCCAAGCCAAGGAGGCCACA...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCTGGTCTGTGGCCTCCTaGGCTTGGCGCCGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGIWSVAS*AWRRSS
Trigger: GGAGCTGCGGCGCCAAGCCAAGGAGGCCACAGACCA...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCGCGAGGGAATGCCGCTaGGGGACGTCCTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGARECR*GTSLVS
Trigger: GCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCGC...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTGCTCACCCTGACCGCTaGCCGGTCCGCAGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCAHPDR*PVRRVR
Trigger: CCTCACCCTGCGGACCGGCAAGCGGTCAGGGTGAGC...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCCCGGGACTGTCGCCGTaGCAGAGGGAGTGTGTCCGG +
Preference number: 5 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGIPGLSP*QRECVR
Trigger: CCGGACACACTCCCTCTGCAACGGCGACAGTCCCGG...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAAAGTTCGGCTCGCAGGTaGGTCACCTCCTGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQSSARR*VTSWLA
Trigger: GGCCAGCCAGGAGGTGACCAACCTGCGAGCCGAACT...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAAGGCAGCCGGCCAGCCTaGTACTTGAGACCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQGSRPA*YLRPLL
Trigger: CAGCAGCGGTCTCAAGTACAAGGCTGGCCGGCTGCC...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS TCA 90 bp CTGGCCTTACGTTGCAGAGGGAGTGTGTCCGGTGTCGAGGGGAGTTaGTGTCGCTCGGTGTGGACGACCGGTCGCCTTCGGCGGCAGATG +
Preference number: 5 (lower is better)
Translates to: LALRCRGSVSGVEGS*CRSVWTTGRLRRQM
Trigger: CATCTGCCGCCGAAGGCGACCGGTCGTCCACACCGAGCGACATCAACTCCCCTCGACACCGGACACACTCCCTCTGCAACGTAAGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS GCA 90 bp TCAGGGGCGGTACCATCAAAGAGGCCGGGGTCGAGGGACTTCCGCTaGTTCCCTCTGGCGAAGACGCGGGAGATGGAGCCGAATCCCATC +
Preference number: 5 (lower is better)
Translates to: SGAVPSKRPGSRDFR*FPLAKTREMEPNPI
Trigger: GATGGGATTCGGCTCCATCTCCCGCGTCTTCGCCAGAGGGAAGCAGCGGAAGTCCCTCGACCCCGGCCTCTTTGATGGTACCGCCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361144.9
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
CDS-3UTR CAA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCAGGACCTCAGAGGACTaGCCGCCCTGCGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGIRTSED*PPCDSS
Trigger: GGAGGAGTCGCAGGGCGGCAAGTCCTCTGAGGTCCT...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTGGTCTGTGGCCTCCTaGGCTTGGCGCCGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHWSVAS*AWRRSS
Trigger: GGAGCTGCGGCGCCAAGCCAAGGAGGCCACAGACCA...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCTTCATCCGGTTGTCCTaGAGGTCCAGCTGGGAGCGC +
Preference number: 5 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFFIRLS*RSSWER
Trigger: GCGCTCCCAGCTGGACCTCAAGGACAACCGGATGAA...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCCGCTTGGGGACGTCCTaGGTCAGCGTAGCTAAGGAC +
Preference number: 5 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVRLGTS*VSVAKD
Trigger: GTCCTTAGCTACGCTGACCAAGGACGTCCCCAAGCG...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCCGGTGTCGAGGGGAGTaGATGTCGCTCGGTGTGGAC +
Preference number: 5 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGRCRGE*MSLGVD
Trigger: GTCCACACCGAGCGACATCAACTCCCCTCGACACCG...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAGGCTGCTGTGACAAGTaGGGGGACGGAGTCCAAGGG +
Preference number: 5 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVGCCDK*GDGVQG
Trigger: CCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCC...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCGCCATGGCCTCGGCATaGAATGTGGGCTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGAMASA*NVGSST
Trigger: GGTGCTGGAGCCCACATTCAATGCCGAGGCCATGGC...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCCTGGGCACGTTGCTGTaGCTGCCTCCCAAACGGCAG +
Preference number: 5 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGLGTLL*LPPKRQ
Trigger: CTGCCGTTTGGGAGGCAGCAACAGCAACGTGCCCAG...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS TCA 90 bp TACTGGGACAGGCCAATGTCATTCAGCCAGGCCTTGGCCACCCAGTaGTGGTCCAGCTCGGCAGCTTTGGACAGGCTGCGGCCTGCCTCG +
Preference number: 5 (lower is better)
Translates to: YWDRPMSFSQALATQ*WSSSAALDRLRPAS
Trigger: CGAGGCAGGCCGCAGCCTGTCCAAAGCTGCCGAGCTGGACCATCACTGGGTGGCCAAGGCCTGGCTGAATGACATTGGCCTGTCCCAGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 90 bp TGGCTGTCCGAGTCATCAAAGAGGCCGGGGTCGAGGGACTTCCGCTaGTTCCCTCTGGCGAAGACGCGGGAGATGGAGCCGAATCCCATC +
Preference number: 5 (lower is better)
Translates to: WLSESSKRPGSRDFR*FPLAKTREMEPNPI
Trigger: GATGGGATTCGGCTCCATCTCCCGCGTCTTCGCCAGAGGGAAGCAGCGGAAGTCCCTCGACCCCGGCCTCTTTGATGACTCGGACAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 90 bp ATGAAACAGCAGAGACAGGTGACACAGGAGAGCAGAGGCGGCCCGTaGGGTGTGGGGCCTTCCGTGGAAGGATGCCATCTCTCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: MKQQRQVTQESRGGP*GVGPSVEGCHLSGA
Trigger: GGCCCCTGAGAGATGGCATCCTTCCACGGAAGGCCCCACACCGCACGGGCCGCCTCTGCTCTCCTGTGTCACCTGTCTCTGCTGTTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS-3UTR CAA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATAGGACCTCAGAGGACTaGCCGCCCTGCGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHRTSED*PPCDSS
Trigger: GGAGGAGTCGCAGGGCGGCAAGTCCTCTGAGGTCCT...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAAGCAGGTCCTTCTCCTaGGCCAGCGCTTTGACCGCA +
Preference number: 5 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVSRSFS*ASALTA
Trigger: TGCGGTCAAAGCGCTGGCCAAGGAGAAGGACCTGCT...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTGTGGCCTCCTTGGCTaGGCGCCGCAGCTCCCACTT +
Preference number: 5 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHCGLLG*APQLPL
Trigger: AAGTGGGAGCTGCGGCGCCAAGCCAAGGAGGCCACA...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATCACTCCTGGTTGCCATaGAGCACCGTCTCGCCCGGC +
Preference number: 5 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHHSWLP*STVSPG
Trigger: GCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGTG...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAACCACCCACTCCTGGTaGCCATTGAGCACCGTCTCG +
Preference number: 5 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVTTHSW*PLSTVS
Trigger: CGAGACGGTGCTCAATGGCAACCAGGAGTGGGTGGT...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCCCGGGACTGTCGCCGTaGCAGAGGGAGTGTGTCCGG +
Preference number: 5 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSPGLSP*QRECVR
Trigger: CCGGACACACTCCCTCTGCAACGGCGACAGTCCCGG...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATCCAAGACAAGGCCCCTaGGCCCGGCTCGCGAGTCTT +
Preference number: 5 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHPRQGP*ARLASL
Trigger: AAGACTCGCGAGCCGGGCCAAGGGGCCTTGTCTTGG...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCCCATGGACGCCGCTGTaGGTCAGGTTGTCTGCGTAC +
Preference number: 5 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGPWTPL*VRLSAY
Trigger: GTACGCAGACAACCTGACCAACAGCGGCGTCCATGG...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCGTCCAGATGCCCACATaGCCCTGCAGGGACCAAGAC +
Preference number: 5 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGVQMPT*PCRDQD
Trigger: GTCTTGGTCCCTGCAGGGCAATGTGGGCATCTGGAC...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCCTCGCTGGCCAGCCATaGGCAAGAATGCCAGACTCA +
Preference number: 5 (lower is better)
Translates to: SSPTPALSDVSARGSTSCLAGQP*ARMPDS
Trigger: TGAGTCTGGCATTCTTGCCAATGGCTGGCCAGCGAG...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CCA 90 bp AGGCCTGGGAGTACTGGGACAGGCCAATGTCATTCAGCCAGGCCTTaGCCACCCAGTGATGGTCCAGCTCGGCAGCTTTGGACAGGCTGC +
Preference number: 5 (lower is better)
Translates to: RPGSTGTGQCHSARP*PPSDGPARQLWTGC
Trigger: GCAGCCTGTCCAAAGCTGCCGAGCTGGACCATCACTGGGTGGCCAAGGCCTGGCTGAATGACATTGGCCTGTCCCAGTACTCCCAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTTCCTTGGCCAGCGCTTaGACCGCATCCTCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCSLASA*TASSLS
Trigger: GGAGAGCGAGGATGCGGTCAAAGCGCTGGCCAAGGA...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCTGTGGCCTCCTTGGCTaGGCGCCGCAGCTCCCACTT +
Preference number: 5 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSCGLLG*APQLPL
Trigger: AAGTGGGAGCTGCGGCGCCAAGCCAAGGAGGCCACA...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AGCTGCTGGAGGCCCCTCGGAGAACAGACTCAGGCCAGGGTCCCACTGGTCGTAGGCCTTGGGCAGACCTaGCTGAACAGCTCACACATC +
Preference number: 5 (lower is better)
Translates to: SCWRPLGEQTQARVPLVVGLGQT*LNSSHI
Trigger: GATGTGTGAGCTGTTCAGCAAGGTCTGCCCAAGGCC...TACGACCAGTGGGACCCTGGCCTGAGTCTGTTCTCCGAGGGGCCTCCAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCCAGTGCAAACGGCCTaGAAGGAGGTCGAGCATCAT +
Preference number: 5 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFPVQTA*KEVEHH
Trigger: ATGATGCTCGACCTCCTTCAAGGCCGTTTGCACTGG...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCGCAGAGGCTCCTGGGGGTCAGCCACAAAATGCCTTaGTGTGTCAGGGCTCGGGAG +
Preference number: 5 (lower is better)
Translates to: ERSGSAKDKGASQRLLGVSHKMP*CVRARE
Trigger: CTCCCGAGCCCTGACACACAAAGGCATTTTGTGGCT...GACCCCCAGGAGCCTCTGCGAGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCTTGGGGTCTTTGGTGTaGGTCATGTGGCAGCGTCCA +
Preference number: 5 (lower is better)
Translates to: SSPTPALSDVSARGSTSCLGSLV*VMWQRP
Trigger: TGGACGCTGCCACATGACCAACACCAAAGACCCCAA...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS GCA 90 bp TCCTGGTTGCCATTGAGCACCGTCTCGCCCGGCATGGCGAGGGAATaGCGCTTGGGGACGTCCTTGGTCAGCGTAGCTAAGGACTGTTTG +
Preference number: 5 (lower is better)
Translates to: SWLPLSTVSPGMARE*RLGTSLVSVAKDCL
Trigger: CAAACAGTCCTTAGCTACGCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGGTGCTCAATGGCAACCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CCA 90 bp GCGTACTCCTTCAGGTCGATGTCTCGAACCCACTTGAGCACCCGCTaGTTGGTCCACACCACGGGGTCAATGTTCTGCGTCTCGCAGCGG +
Preference number: 5 (lower is better)
Translates to: AYSFRSMSRTHLSTR*LVHTTGSMFCVSQR
Trigger: CCGCTGCGAGACGCAGAACATTGACCCCGTGGTGTGGACCAACCAGCGGGTGCTCAAGTGGGTTCGAGACATCGACCTGAAGGAGTACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTGCCTGCAAGGCTTCTTaGGCTCTGGCTAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCACKAS*ALASSC
Trigger: GCAGGAGCTAGCCAGAGCCAAAGAAGCCTTGCAGGC...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGTGGTCTGTGGCCTCCTaGGCTTGGCGCCGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKWSVAS*AWRRSS
Trigger: GGAGCTGCGGCGCCAAGCCAAGGAGGCCACAGACCA...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GGGTGGGTAGGCTCAGGCTGCTGTGACAAGTTGGGGGACGGAGTCCAAGGGATCAGCTCCTTCATCCGGTaGTCCTTGAGGTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GWVGSGCCDKLGDGVQGISSFIR*SLRSSW
Trigger: CCAGCTGGACCTCAAGGACAACCGGATGAAGGAGCT...GATCCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCCTGAGCCTACCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTCGCTTGGGGACGTCCTaGGTCAGCGTAGCTAAGGAC +
Preference number: 5 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCRLGTS*VSVAKD
Trigger: GTCCTTAGCTACGCTGACCAAGGACGTCCCCAAGCG...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTCCACTGGTCGTACCCTaGGATGTGTGGCAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCPLVVP*DVWQAV
Trigger: GACAGCCTGCCACACATCCAAGGGTACGACCAGTGG...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCACCTGGTGGAACTTCTaGGACACGTTCAGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFTWWNF*DTFRCF
Trigger: GAAGCACCTGAACGTGTCCAAGAAGTTCCACCAGGT...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTATTGAGCACCCGCTGGTaGGTCCACACCACGGGGTCA +
Preference number: 5 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVLSTRW*VHTTGS
Trigger: TGACCCCGTGGTGTGGACCAACCAGCGGGTGCTCAA...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCCATGGCCTCGGCATaGAATGTGGGCTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVAMASA*NVGSST
Trigger: GGTGCTGGAGCCCACATTCAATGCCGAGGCCATGGC...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAAGAGTCCATCGGGATTTaGCCCAGGAGCAAGGGACAT +
Preference number: 5 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQESIGI*PRSKGH
Trigger: ATGTCCCTTGCTCCTGGGCAAAATCCCGATGGACTC...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTACTGGGCACGTTGCTGTaGCTGCCTCCCAAACGGCAG +
Preference number: 5 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVLGTLL*LPPKRQ
Trigger: CTGCCGTTTGGGAGGCAGCAACAGCAACGTGCCCAG...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCCCCCCAATTGTCCACTaGTCTCCAGCAAGATCGAAC +
Preference number: 5 (lower is better)
Translates to: SSPTPALSDVSARGSTSCPPIVH*SPARSN
Trigger: GTTCGATCTTGCTGGAGACAAGTGGACAATTGGGGG...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCATTGGGTCCAGATTGTaGTGTGGCTTCTCCCCTCCT +
Preference number: 5 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFIGSRL*CGFSPP
Trigger: AGGAGGGGAGAAGCCACACAACAATCTGGACCCAAT...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS TCA 90 bp TCCTCCAGGTCCTTCGCCAACATCTCCTTCATCTGCCGGAGAAGGTaGACTTCCTCCTGGAGCCGCGACACTTCTTCCCGCAGGAGCACG +
Preference number: 5 (lower is better)
Translates to: SSRSFANISFICRRR*TSSWSRDTSSRRST
Trigger: CGTGCTCCTGCGGGAAGAAGTGTCGCGGCTCCAGGAGGAAGTTCACCTTCTCCGGCAGATGAAGGAGATGTTGGCGAAGGACCTGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361144.9
CDS GCA 90 bp TCTCGGAGCTGCTCCTCGCGGCTCTCCAGTGTGGCATACAGCTGCTaGATCTGGCTCACCAGGTCTGTCTTCTCGCCCTTTAAGCGCTTC +
Preference number: 5 (lower is better)
Translates to: SRSCSSRLSSVAYSC*IWLTRSVFSPFKRF
Trigger: GAAGCGCTTAAAGGGCGAGAAGACAGACCTGGTGAGCCAGATGCAGCAGCTGTATGCCACACTGGAGAGCCGCGAGGAGCAGCTCCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361144.9
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS GCA 90 bp AAGTCTCGGAGCTGCTCCTCGCGGCTCTCCAGTGTGGCATACAGCTaGTGCATCTGGCTCACCAGGTCTGTCTTCTCGCCCTTTAAGCGC +
Preference number: 5 (lower is better)
Translates to: KSRSCSSRLSSVAYS*CIWLTRSVFSPFKR
Trigger: GCGCTTAAAGGGCGAGAAGACAGACCTGGTGAGCCAGATGCAGCAGCTGTATGCCACACTGGAGAGCCGCGAGGAGCAGCTCCGAGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361144.9
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS GCA 90 bp GCAGGTTGGTCACCTCCTGGCTGGCCGACTGGACCGCCCCATCGATaGGGAGCGCGAGCTGCTTATTGTCTTCCATCATGCTCAGGATTT +
Preference number: 5 (lower is better)
Translates to: AGWSPPGWPTGPPHR*GARAAYCLPSCSGF
Trigger: AAATCCTGAGCATGATGGAAGACAATAAGCAGCTCGCGCTCCGCATCGATGGGGCGGTCCAGTCGGCCAGCCAGGAGGTGACCAACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376030.7
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CCA 90 bp ATGGCCTCGGCATTGAATGTGGGCTCCAGCACCAGCACAGCACCATaGACGCCGCTGTTGGTCAGGTTGTCTGCGTACTCCTTCAGGTCG +
Preference number: 5 (lower is better)
Translates to: MASALNVGSSTSTAP*TPLLVRLSAYSFRS
Trigger: CGACCTGAAGGAGTACGCAGACAACCTGACCAACAGCGGCGTCCATGGTGCTGTGCTGGTGCTGGAGCCCACATTCAATGCCGAGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGAGGACCTCAGAGGACTaGCCGCCCTGCGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKRTSED*PPCDSS
Trigger: GGAGGAGTCGCAGGGCGGCAAGTCCTCTGAGGTCCT...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAATGGTCTGTGGCCTCCTaGGCTTGGCGCCGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LSCGLQLQDPMDEAECHEWSVAS*AWRRSS
Trigger: GGAGCTGCGGCGCCAAGCCAAGGAGGCCACAGACCA...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTGCGAGGGAATGCCGCTaGGGGACGTCCTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCARECR*GTSLVS
Trigger: GCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCGC...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGGGCTGCTGTGACAAGTaGGGGGACGGAGTCCAAGGG +
Preference number: 5 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKGCCDK*GDGVQG
Trigger: CCCTTGGACTCCGTCCCCCAACTTGTCACAGCAGCC...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCACCTGGTGGAACTTCTaGGACACGTTCAGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGTWWNF*DTFRCF
Trigger: GAAGCACCTGAACGTGTCCAAGAAGTTCCACCAGGT...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS TCA 90 bp TCCTCCAGGTCCTTCGCCAACATCTCCTTCATCTGCCGGAGAAGGTaGACTTCCTCCTGGAGCCGCGACACTTCTTCCCGCAGGAGCACT +
Preference number: 5 (lower is better)
Translates to: SSRSFANISFICRRR*TSSWSRDTSSRRST
Trigger: AGTGCTCCTGCGGGAAGAAGTGTCGCGGCTCCAGGAGGAAGTTCACCTTCTCCGGCAGATGAAGGAGATGTTGGCGAAGGACCTGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS GCA 90 bp TCCTGGCTGGCCGACTGGACCGCCCCATCGATGCGGAGCGCGAGCTaGTTATTGTCTTCCATCATGCTCAGGATTTTGGCCTGTTGTGTC +
Preference number: 5 (lower is better)
Translates to: SWLADWTAPSMRSAS*LLSSIMLRILACCV
Trigger: GACACAACAGGCCAAAATCCTGAGCATGATGGAAGACAATAAGCAGCTCGCGCTCCGCATCGATGGGGCGGTCCAGTCGGCCAGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503743.5
CDS GCA 90 bp GGTCATGTGGCAGCGTCCAGACCCTTGGAGTGTCAGAGCAAAGGATaGCGTCGCTGGCCCAGGAACTGCAGATCTGAGGCTACTTGTCAC +
Preference number: 5 (lower is better)
Translates to: GHVAASRPLECQSKG*RRWPRNCRSEATCH
Trigger: GTGACAAGTAGCCTCAGATCTGCAGTTCCTGGGCCAGCGACGGCATCCTTTGCTCTGACACTCCAAGGGTCTGGACGCTGCCACATGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS CCA 90 bp AGCTGCTCCTCGCGGCTCTCCAGTGTGGCATACAGCTGCTGCATCTaGCTCACCAGGTCTGTCTTCTCGCCCTTTAAGCGCTTCCGATCA +
Preference number: 5 (lower is better)
Translates to: SCSSRLSSVAYSCCI*LTRSVFSPFKRFRS
Trigger: TGATCGGAAGCGCTTAAAGGGCGAGAAGACAGACCTGGTGAGCCAGATGCAGCAGCTGTATGCCACACTGGAGAGCCGCGAGGAGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361144.9
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CCA 90 bp TACCATCAAAGAGGCCGGGGTCGAGGGACTTCCGCTGCTTCCCTCTaGCGAAGACGCGGGAGATGGAGCCGAATCCCATCTTCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: YHQRGRGRGTSAASL*RRRGRWSRIPSSLS
Trigger: AGAAAGAGAAGATGGGATTCGGCTCCATCTCCCGCGTCTTCGCCAGAGGGAAGCAGCGGAAGTCCCTCGACCCCGGCCTCTTTGATGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361144.9
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
CDS CCA 90 bp AGTCATCAAAGAGGCCGGGGTCGAGGGACTTCCGCTGCTTCCCTCTaGCGAAGACGCGGGAGATGGAGCCGAATCCCATCTTCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: SHQRGRGRGTSAASL*RRRGRWSRIPSSLS
Trigger: AGAAAGAGAAGATGGGATTCGGCTCCATCTCCCGCGTCTTCGCCAGAGGGAAGCAGCGGAAGTCCCTCGACCCCGGCCTCTTTGATGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CCA 90 bp GGAAAGAACAGAACAGGAAATGCATTCGCCAGAGTGCTCCCTGGGTaGACGAGAGGAAACAGCGAGTATGGCTTCACCCCGCCACCCCCG +
Preference number: 5 (lower is better)
Translates to: GKNRTGNAFARVLPG*TRGNSEYGFTPPPP
Trigger: CGGGGGTGGCGGGGTGAAGCCATACTCGCTGTTTCCTCTCGTCCACCCAGGGAGCACTCTGGCGAATGCATTTCCTGTTCTGTTCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS-3UTR CAA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACGCTCACCCTGACCGCTaGCCGGTCCGCAGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: ADLEAELTFQVFPADKAHAHPDR*PVRRVR
Trigger: CCTCACCCTGCGGACCGGCAAGCGGTCAGGGTGAGC...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTCACTCGTGTTTTCACTaGTTAGAGGCGCTCGGCCAC +
Preference number: 5 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCHSCFH*LEALGH
Trigger: GTGGCCGAGCGCCTCTAACAAGTGAAAACACGAGTG...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGCCACTGGTCGTACCCTaGGATGTGTGGCAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKPLVVP*DVWQAV
Trigger: GACAGCCTGCCACACATCCAAGGGTACGACCAGTGG...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAATCCGCCAGTCTCCGGTaGGTGGCCGTGAGTTCGGCT +
Preference number: 5 (lower is better)
Translates to: LSCGLQLQDPMDEAECHESASLR*VAVSSA
Trigger: AGCCGAACTCACGGCCACCAACCGGAGACTGGCGGA...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTATTCTCCGTGCAGGCCTaGACGTACATAGGCATGGCC +
Preference number: 5 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVFSVQA*TYIGMA
Trigger: GGCCATGCCTATGTACGTCAAGGCCTGCACGGAGAA...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTACCGCTGTTGGTCAGGTaGTCTGCGTACTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVPLLVR*SAYSFR
Trigger: CCTGAAGGAGTACGCAGACAACCTGACCAACAGCGG...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTGGCAGCCGGCCAGCCTaGTACTTGAGACCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVAGSRPA*YLRPLL
Trigger: CAGCAGCGGTCTCAAGTACAAGGCTGGCCGGCTGCC...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCGTCTCGGTTAGGACATaGGTGAGCTATGTCACCTAT +
Preference number: 5 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFVSVRT*VSYVTY
Trigger: ATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCCTGCCCCCATAACTTCCCATaGTCTCCTGAGAGGTTACAA +
Preference number: 5 (lower is better)
Translates to: SSPTPALSDVSARGSTSCPHNFP*SPERLQ
Trigger: TTGTAACCTCTCAGGAGACAATGGGAAGTTATGGGG...GCAGGAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCATCGCGGTTGCCCGTGTaGCCTCAGGCCTGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPSRLPV*PQACWP
Trigger: AGGCCAGCAGGCCTGAGGCAACACGGGCAACCGCGA...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACTCGCGGTTGCCCGTGTaGCCTCAGGCCTGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHSRLPV*PQACWP
Trigger: AGGCCAGCAGGCCTGAGGCAACACGGGCAACCGCGA...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCGCAGCGTCCAGACCCTaGGAGTGTCAGAGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSAASRP*ECQSKG
Trigger: TCCTTTGCTCTGACACTCCAAGGGTCTGGACGCTGC...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS TCA 90 bp TCAGGTTGTCTGCGTACTCCTTCAGGTCGATGTCTCGAACCCACTTaGGCACCCGCTGGTTGGTCCACACCACGGGGTCAATGTTCTGCG +
Preference number: 5 (lower is better)
Translates to: SGCLRTPSGRCLEPT*APAGWSTPRGQCSA
Trigger: CGCAGAACATTGACCCCGTGGTGTGGACCAACCAGCGGGTGCTCAAGTGGGTTCGAGACATCGACCTGAAGGAGTACGCAGACAACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CCA 90 bp CTTTTGGGGTCTTTGGTGTTGGTCATGTGGCAGCGTCCAGACCCTTaGAGTGTCAGAGCAAAGGATGCCGTCGCTGGCCCAGGAACTGCA +
Preference number: 5 (lower is better)
Translates to: LLGSLVLVMWQRPDP*SVRAKDAVAGPGTA
Trigger: TGCAGTTCCTGGGCCAGCGACGGCATCCTTTGCTCTGACACTCCAAGGGTCTGGACGCTGCCACATGACCAACACCAAAGACCCCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS-3UTR CAA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTAGCAGGTCCTTCTCCTaGGCCAGCGCTTTGACCGCA +
Preference number: 5 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCSRSFS*ASALTA
Trigger: TGCGGTCAAAGCGCTGGCCAAGGAGAAGGACCTGCT...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTCGCTTGGGGACGTCCTaGGTCAGCGTAGCTAAGGAC +
Preference number: 5 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCRLGTS*VSVAKD
Trigger: GTCCTTAGCTACGCTGACCAAGGACGTCCCCAAGCG...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCGCGAGGGAATGCCGCTaGGGGACGTCCTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFARECR*GTSLVS
Trigger: GCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCGC...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACCACTCCTGGTTGCCATaGAGCACCGTCTCGCCCGGC +
Preference number: 5 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHHSWLP*STVSPG
Trigger: GCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGTG...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCACACTCCTGGTTGCCATaGAGCACCGTCTCGCCCGGC +
Preference number: 5 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPHSWLP*STVSPG
Trigger: GCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGTG...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCCCGGGACTGTCGCCGTaGCAGAGGGAGTGTGTCCGG +
Preference number: 5 (lower is better)
Translates to: SGDRISASPRNVAAKPHSPGLSP*QRECVR
Trigger: CCGGACACACTCCCTCTGCAACGGCGACAGTCCCGG...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp ACAGACTCAGGCCAGGGTCCCACTGGTCGTACCCTTGGATGTGTGGCAGGCTGTCTGCCTGCTTGCTGTTaGCTGACTTTTGGACCAGGT +
Preference number: 5 (lower is better)
Translates to: TDSGQGPTGRTLGCVAGCLPACC*LTFGPG
Trigger: ACCTGGTCCAAAAGTCAGCAAACAGCAAGCAGGCAG...ACAGCCTGCCACACATCCAAGGGTACGACCAGTGGGACCCTGGCCTGAGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATCTGCCTGCTTGCTGTTaGCTGACTTTTGGACCAGGT +
Preference number: 5 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHLPACC*LTFGPG
Trigger: ACCTGGTCCAAAAGTCAGCAAACAGCAAGCAGGCAG...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAATTCCCGCAGGAGCACTaGCGCTCCAAGCTGGGGGTT +
Preference number: 5 (lower is better)
Translates to: LSCGLQLQDPMDEAECHEFPQEH*RSKLGV
Trigger: AACCCCCAGCTTGGAGCGCAAGTGCTCCTGCGGGAA...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCTCCAGCTCGGCAGCTTaGGACAGGCTGCGGCCTGCC +
Preference number: 5 (lower is better)
Translates to: SGDRISASPRNVAAKPHSSSSAA*DRLRPA
Trigger: GGCAGGCCGCAGCCTGTCCAAAGCTGCCGAGCTGGA...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCCCTGCTGAAGTTCACTaGGTACAGCAGCTCGATCCC +
Preference number: 5 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSPAEVH*VQQLDP
Trigger: GGGATCGAGCTGCTGTACCAAGTGAACTTCAGCAGG...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GGGCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGAGTCCATCGGGATTTaGCCCAGGAGCAAGGGACAT +
Preference number: 5 (lower is better)
Translates to: GLLGQDVAGHCSGAGPSVESIGI*PRSKGH
Trigger: ATGTCCCTTGCTCCTGGGCAAAATCCCGATGGACTC...TACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCAAGAGGCAGCACTTCGGATTTATATGTTTCTaGAGCCCTGTTGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: REFPNPRPVRRLGKRQHFGFICF*SPVGGS
Trigger: AGAGCCTCCAACAGGGCTCAAGAAACATATAAATCC...GAAGTGCTGCCTCTTGCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAAAAGAGGCATTCGCGGTaGCCCGTGTTGCCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: LSCGLQLQDPMDEAECHEKRHSR*PVLPQA
Trigger: GGCCTGAGGCAACACGGGCAACCGCGAATGCCTCTT...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GTAAGATGCTGTAGCCGAGAGTTCCCCAACCCCCGCCCTGTCCGACGTCTCGGCTTTATTGGGTCCAGATaGTTGTGTGGCTTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: VRCCSREFPNPRPVRRLGFIGSR*LCGFSP
Trigger: AGGGGAGAAGCCACACAACAATCTGGACCCAATAAA...GCCGAGACGTCGGACAGGGCGGGGGTTGGGGAACTCTCGGCTACAGCATCTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCACTCAGAGGTTGCCATaGCCCACAGGCTTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGTQRLP*PTGFLL
Trigger: GAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGT...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 90 bp CCCAGCAGGATGCTGACCTGGTGGAACTTCTTGGACACGTTCAGGTaGTTCTCCAGGTCTCGCTTCATCAGGGAATTCAGCATCCGCCCA +
Preference number: 5 (lower is better)
Translates to: PSRMLTWWNFLDTFR*FSRSRFIREFSIRP
Trigger: TGGGCGGATGCTGAATTCCCTGATGAAGCGAGACCTGGAGAAGCACCTGAACGTGTCCAAGAAGTTCCACCAGGTCAGCATCCTGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 90 bp CCCTTGGAGTGTCAGAGCAAAGGATGCCGTCGCTGGCCCAGGAACTaGAGATCTGAGGCTACTTGTCACTTCCAAGAAAATGTCCCCGCC +
Preference number: 5 (lower is better)
Translates to: PLECQSKGCRRWPRN*RSEATCHFQENVPA
Trigger: GGCGGGGACATTTTCTTGGAAGTGACAAGTAGCCTCAGATCTGCAGTTCCTGGGCCAGCGACGGCATCCTTTGCTCTGACACTCCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS CCA 90 bp GCAGCGTCCAGACCCTTGGAGTGTCAGAGCAAAGGATGCCGTCGCTaGCCCAGGAACTGCAGATCTGAGGCTACTTGTCACTTCCAAGAA +
Preference number: 5 (lower is better)
Translates to: AASRPLECQSKGCRR*PRNCRSEATCHFQE
Trigger: TTCTTGGAAGTGACAAGTAGCCTCAGATCTGCAGTTCCTGGGCCAGCGACGGCATCCTTTGCTCTGACACTCCAAGGGTCTGGACGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS-3UTR CAA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCATCCTTGGCCAGCGCTTaGACCGCATCCTCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPSLASA*TASSLS
Trigger: GGAGAGCGAGGATGCGGTCAAAGCGCTGGCCAAGGA...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCCGGTGTCGAGGGGAGTaGATGTCGCTCGGTGTGGAC +
Preference number: 5 (lower is better)
Translates to: GSANSSSIRPPPCVTELFRCRGE*MSLGVD
Trigger: GTCCACACCGAGCGACATCAACTCCCCTCGACACCG...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCAGTTCGGCTCGCAGGTaGGTCACCTCCTGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: SGDRISASPRNVAAKPHSSSARR*VTSWLA
Trigger: GGCCAGCCAGGAGGTGACCAACCTGCGAGCCGAACT...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTTTCCCGCAGGAGCACTaGCGCTCCAAGCTGGGGGTT +
Preference number: 5 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPFPQEH*RSKLGV
Trigger: AACCCCCAGCTTGGAGCGCAAGTGCTCCTGCGGGAA...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACTTGAGCACCCGCTGGTaGGTCCACACCACGGGGTCA +
Preference number: 5 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHLSTRW*VHTTGS
Trigger: TGACCCCGTGGTGTGGACCAACCAGCGGGTGCTCAA...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCTGGAAATCGGGATCTTaGCTGCTGAAGCCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSWKSGS*LLKPLP
Trigger: AGGAAGGGGCTTCAGCAGCAAAGATCCCGATTTCCA...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACCCTGGGTCTCTCACGTaGGGTCTGGTGGAGCCACCA +
Preference number: 5 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHPGSLT*GLVEPP
Trigger: TGGTGGCTCCACCAGACCCAACGTGAGAGACCCAGG...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCCTTCTCTCCACTTTATaGGGTCCAGATTGTTGTGTG +
Preference number: 5 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGLLSTL*GPDCCV
Trigger: CACACAACAATCTGGACCCAATAAAGTGGAGAGAAG...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GGTCAGAGGGGCCTGGATGCCCCTGGAGGGAACACTGAGGTCACCTCTGGCCAATCCAGTGCCTTCGACTaGGTGACAATAAAATGGGAA +
Preference number: 5 (lower is better)
Translates to: GQRGLDAPGGNTEVTSGQSSAFD*VTIKWE
Trigger: TTCCCATTTTATTGTCACCAAGTCGAAGGCACTGGA...TTGGCCAGAGGTGACCTCAGTGTTCCCTCCAGGGGCATCCAGGCCCCTCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS TCA 90 bp TCAAGATCCTCTAGTGACTGTACAATAGGGTTGTGCAGGTTCTTCTaGACTGGGCCGGGACTGTCGCCGTTGCAGAGGGAGTGTGTCCGG +
Preference number: 5 (lower is better)
Translates to: SRSSSDCTIGLCRFF*TGPGLSPLQRECVR
Trigger: CCGGACACACTCCCTCTGCAACGGCGACAGTCCCGGCCCAGTTCAGAAGAACCTGCACAACCCTATTGTACAGTCACTAGAGGATCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000503743.5
ENST00000636203.1
CDS TCA 90 bp CGCTTCATCAGGGAATTCAGCATCCGCCCATCAACCAGGTGGTTCTaGAAGGCCTGGGAGTACTGGGACAGGCCAATGTCATTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: RFIREFSIRPSTRWF*KAWEYWDRPMSFSQ
Trigger: CTGGCTGAATGACATTGGCCTGTCCCAGTACTCCCAGGCCTTTCAGAACCACCTGGTTGATGGGCGGATGCTGAATTCCCTGATGAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CCA 90 bp TTCACTTGGTACAGCAGCTCGATCCCCAGCAGGATGCTGACCTGGTaGAACTTCTTGGACACGTTCAGGTGCTTCTCCAGGTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: FTWYSSSIPSRMLTW*NFLDTFRCFSRSRF
Trigger: GAAGCGAGACCTGGAGAAGCACCTGAACGTGTCCAAGAAGTTCCACCAGGTCAGCATCCTGCTGGGGATCGAGCTGCTGTACCAAGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CCA 90 bp AAGTTCACTTGGTACAGCAGCTCGATCCCCAGCAGGATGCTGACCTaGTGGAACTTCTTGGACACGTTCAGGTGCTTCTCCAGGTCTCGC +
Preference number: 5 (lower is better)
Translates to: KFTWYSSSIPSRMLT*WNFLDTFRCFSRSR
Trigger: GCGAGACCTGGAGAAGCACCTGAACGTGTCCAAGAAGTTCCACCAGGTCAGCATCCTGCTGGGGATCGAGCTGCTGTACCAAGTGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCTCCTTGGCCAGCGCTTaGACCGCATCCTCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: SGDRISASPRNVAAKPHSSLASA*TASSLS
Trigger: GGAGAGCGAGGATGCGGTCAAAGCGCTGGCCAAGGA...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGAGCGAGGGAATGCCGCTaGGGGACGTCCTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRARECR*GTSLVS
Trigger: GCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCGC...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTACCACCCACTCCTGGTaGCCATTGAGCACCGTCTCG +
Preference number: 5 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPTTHSW*PLSTVS
Trigger: CGAGACGGTGCTCAATGGCAACCAGGAGTGGGTGGT...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCACCACCCACTCCTGGTaGCCATTGAGCACCGTCTCG +
Preference number: 5 (lower is better)
Translates to: GSANSSSIRPPPCVTELFTTHSW*PLSTVS
Trigger: CGAGACGGTGCTCAATGGCAACCAGGAGTGGGTGGT...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AGACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTAGCTCACCCTGACCGCTaGCCGGTCCGCAGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: RRQRVDRFTHGLRYVHQLAHPDR*PVRRVR
Trigger: CCTCACCCTGCGGACCGGCAAGCGGTCAGGGTGAGC...TAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACCCGGGACTGTCGCCGTaGCAGAGGGAGTGTGTCCGG +
Preference number: 5 (lower is better)
Translates to: DDRELTGSHTVCGMYINYPGLSP*QRECVR
Trigger: CCGGACACACTCCCTCTGCAACGGCGACAGTCCCGG...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAACCAAGACAAGGCCCCTaGGCCCGGCTCGCGAGTCTT +
Preference number: 5 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQPRQGP*ARLASL
Trigger: AAGACTCGCGAGCCGGGCCAAGGGGCCTTGTCTTGG...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTCCTGCTGAAGTTCACTaGGTACAGCAGCTCGATCCC +
Preference number: 5 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCPAEVH*VQQLDP
Trigger: GGGATCGAGCTGCTGTACCAAGTGAACTTCAGCAGG...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTCGGATGCCTGTGGAGTaGGCTGGGTGGAAGACGGCG +
Preference number: 5 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLRMPVE*AGWKTA
Trigger: CGCCGTCTTCCACCCAGCCAACTCCACAGGCATCCG...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACCGGCCAGCCTTGTACTaGAGACCGCTGCTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDRPALY*RPLLFS
Trigger: GGAGAACAGCAGCGGTCTCAAGTACAAGGCTGGCCG...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACCCTGGGTCTCTCACGTaGGGTCTGGTGGAGCCACCA +
Preference number: 5 (lower is better)
Translates to: ADLEAELTFQVFPADKAHPGSLT*GLVEPP
Trigger: TGGTGGCTCCACCAGACCCAACGTGAGAGACCCAGG...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACGGGCCTCCTCCCACCTaGGCAGCTCCGTTTAAGGCT +
Preference number: 5 (lower is better)
Translates to: ADLEAELTFQVFPADKAHGPPPT*AAPFKA
Trigger: AGCCTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCC...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCCTTCAACCTAAAGAGTaGGAGCGAACTAGCTCTATA +
Preference number: 5 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGLQPKE*ERTSSI
Trigger: TATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAG...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CACGGATCATTCACCGGCTCCCCACTCAGCGTAGCCACTCCTGGGTGGATCGGCCTACCAACTAGACATTaGGTCTCAGACAGCAAGAAA +
Preference number: 5 (lower is better)
Translates to: HGSFTGSPLSVATPGWIGLPTRH*VSDSKK
Trigger: TTTCTTGCTGTCTGAGACCAAATGTCTAGTTGGTAG...GCCGATCCACCCAGGAGTGGCTACGCTGAGTGGGGAGCCGGTGAATGATCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCACCTGTGGCACCAGGTaGGAGGGAGGTCTCACCTCT +
Preference number: 5 (lower is better)
Translates to: GSANSSSIRPPPCVTELFTCGTR*EGGLTS
Trigger: AGAGGTGAGACCTCCCTCCAACCTGGTGCCACAGGT...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CTGTTCTGCCAGTACCCAGCCCTGTTCAGTGACGTCAAGCTTTTGGGTCCCTGTGCCAGTGACCCCCAATaGTCCACTTGTCTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: LFCQYPALFSDVKLLGPCASDPQ*STCLQQ
Trigger: TTGCTGGAGACAAGTGGACAATTGGGGGTCACTGGC...ACAGGGACCCAAAAGCTTGACGTCACTGAACAGGGCTGGGTACTGGCAGAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCCCTGTGACAATCAGCTaGAGTCTCTCTGCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSPVTIS*SLSAKS
Trigger: AGACTTGGCAGAGAGACTCAAGCTGATTGTCACAGG...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCAGTCCAGATGCCCACATaGCCCTGCAGGGACCAAGAC +
Preference number: 5 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPVQMPT*PCRDQD
Trigger: GTCTTGGTCCCTGCAGGGCAATGTGGGCATCTGGAC...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GAAAGTCCATGGCCCACCCAAGACAGGTGGGCTGGTGTCTTCTCTCTCCTGGGCTTTATTGGGTCCAGATaGTTGTGTGGCTTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: ESPWPTQDRWAGVFSLLGFIGSR*LCGFSP
Trigger: AGGGGAGAAGCCACACAACAATCTGGACCCAATAAA...GCCCAGGAGAGAGAAGACACCAGCCCACCTGTCTTGGGTGGGCCATGGACTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCAAGCCTTGGCAAATCTaGCACAGCAGCAGTTCCATG +
Preference number: 5 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSKPWQI*HSSSSM
Trigger: CATGGAACTGCTGCTGTGCAAGATTTGCCAAGGCTT...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CAA 90 bp GGATCGGCAAACAGCTCTTCAATACGTCCACCCCCATGTGTCACAGAGCTTTTCGGGCCTGTGGCAGAATaGGATGTCGCCAGCGTGGAT +
Preference number: 5 (lower is better)
Translates to: GSANSSSIRPPPCVTELFGPVAE*DVASVD
Trigger: ATCCACGCTGGCGACATCCAATTCTGCCACAGGCCC...GAAAAGCTCTGTGACACATGGGGGTGGACGTATTGAAGAGCTGTTTGCCGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS CCA 90 bp AAAAGGAAAGAACAGAACAGGAAATGCATTCGCCAGAGTGCTCCCTaGGTGGACGAGAGGAAACAGCGAGTATGGCTTCACCCCGCCACC +
Preference number: 5 (lower is better)
Translates to: KRKEQNRKCIRQSAP*VDERKQRVWLHPAT
Trigger: GGTGGCGGGGTGAAGCCATACTCGCTGTTTCCTCTCGTCCACCCAGGGAGCACTCTGGCGAATGCATTTCCTGTTCTGTTCTTTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 90 bp GAGAATGGTGCAGGGACACTGCTGGCTGTAGGTATAACTCCACAGTaGTCCTTCAGGATCAGGGAATGGATGTCAGAGACCCCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: ENGAGTLLAVGITPQ*SFRIREWMSETPPV
Trigger: CACTGGAGGGGTCTCTGACATCCATTCCCTGATCCTGAAGGACCACTGTGGAGTTATACCTACAGCCAGCAGTGTCCCTGCACCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS-3UTR CAA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGAGCAGGTCCTTCTCCTaGGCCAGCGCTTTGACCGCA +
Preference number: 5 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWSRSFS*ASALTA
Trigger: TGCGGTCAAAGCGCTGGCCAAGGAGAAGGACCTGCT...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACAGCAGGTCCTTCTCCTaGGCCAGCGCTTTGACCGCA +
Preference number: 5 (lower is better)
Translates to: ADLEAELTFQVFPADKAHSRSFS*ASALTA
Trigger: TGCGGTCAAAGCGCTGGCCAAGGAGAAGGACCTGCT...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACTGTGGCCTCCTTGGCTaGGCGCCGCAGCTCCCACTT +
Preference number: 5 (lower is better)
Translates to: DDRELTGSHTVCGMYINYCGLLG*APQLPL
Trigger: AAGTGGGAGCTGCGGCGCCAAGCCAAGGAGGCCACA...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGTTCATCCGGTTGTCCTaGAGGTCCAGCTGGGAGCGC +
Preference number: 5 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWFIRLS*RSSWER
Trigger: GCGCTCCCAGCTGGACCTCAAGGACAACCGGATGAA...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTAGCTCCTTCATCCGGTaGTCCTTGAGGTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPSSFIR*SLRSSW
Trigger: CCAGCTGGACCTCAAGGACAACCGGATGAAGGAGCT...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTGTGGTAGAGAGTCTGTaGACTCTGCCGGATGGCTGC +
Preference number: 5 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPVVESL*TLPDGC
Trigger: GCAGCCATCCGGCAGAGTCAACAGACTCTCTACCAC...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCGTGGTAGAGAGTCTGTaGACTCTGCCGGATGGCTGC +
Preference number: 5 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFVVESL*TLPDGC
Trigger: GCAGCCATCCGGCAGAGTCAACAGACTCTCTACCAC...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGACGGTGTCGAGGGGAGTaGATGTCGCTCGGTGTGGAC +
Preference number: 5 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRRCRGE*MSLGVD
Trigger: GTCCACACCGAGCGACATCAACTCCCCTCGACACCG...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATAACTACTTTGCACAGTaGGGTAGCAGCATGGTAACA +
Preference number: 5 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHNYFAQ*GSSMVT
Trigger: TGTTACCATGCTGCTACCCAACTGTGCAAAGTAGTT...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCATTCTCCGTGCAGGCCTaGACGTACATAGGCATGGCC +
Preference number: 5 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPFSVQA*TYIGMA
Trigger: GGCCATGCCTATGTACGTCAAGGCCTGCACGGAGAA...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGTCCAGCTCGGCAGCTTaGGACAGGCTGCGGCCTGCC +
Preference number: 5 (lower is better)
Translates to: CHRAFQVEGFCILPREIQSSSAA*DRLRPA
Trigger: GGCAGGCCGCAGCCTGTCCAAAGCTGCCGAGCTGGA...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACCCATGGACGCCGCTGTaGGTCAGGTTGTCTGCGTAC +
Preference number: 5 (lower is better)
Translates to: ADLEAELTFQVFPADKAHPWTPL*VRLSAY
Trigger: GTACGCAGACAACCTGACCAACAGCGGCGTCCATGG...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GCTGCTTGGACAGGATGTAGCTGGTCACTGTTCTGGAGCTGGCCCCTCTGTAGCGTCTCGGTTAGGACATaGGTGAGCTATGTCACCTAT +
Preference number: 5 (lower is better)
Translates to: AAWTGCSWSLFWSWPLCSVSVRT*VSYVTY
Trigger: ATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC...GCTACAGAGGGGCCAGCTCCAGAACAGTGACCAGCTACATCCTGTCCAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACACCTGTGGCACCAGGTaGGAGGGAGGTCTCACCTCT +
Preference number: 5 (lower is better)
Translates to: ADLEAELTFQVFPADKAHTCGTR*EGGLTS
Trigger: AGAGGTGAGACCTCCCTCCAACCTGGTGCCACAGGT...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CTGAGCTGTGGACTGCAGCTTCAGGACCCTATGGATGAGGCCGAATGTCATGAAGCCAGTGACCCCCAATaGTCCACTTGTCTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: LSCGLQLQDPMDEAECHEASDPQ*STCLQQ
Trigger: TTGCTGGAGACAAGTGGACAATTGGGGGTCACTGGC...TTCATGACATTCGGCCTCATCCATAGGGTCCTGAAGCTGCAGTCCACAGCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCAGTGACGTCAAGCTTTaGGGTCCCTGTCCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: SGDRISASPRNVAAKPHSSDVKL*GPCPGA
Trigger: GGCCCCAGGACAGGGACCCAAAAGCTTGACGTCACT...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS TCA 90 bp AAGATCACAATAGTATTCATCTCCCAGGGCTGCTGTGCCAATGCCTaGGGACAGATAAAAAGCCCCAGCAAGCGGCCTGGCACCCATGAG +
Preference number: 5 (lower is better)
Translates to: KITIVFISQGCCANA*GQIKSPSKRPGTHE
Trigger: CTCATGGGTGCCAGGCCGCTTGCTGGGGCTTTTTATCTGTCCTCAGGCATTGGCACAGCAGCCCTGGGAGATGAATACTATTGTGATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400797.3
CDS TCA 90 bp TCAAGATCCTCTAGTGACTGTACAATAGGGTTGTGCAGGTTCTTCTaGACTGGGCCGGGACTGTCGCCCTGTAGCCAGAGGAGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: SRSSSDCTIGLCRFF*TGPGLSPCSQRRRG
Trigger: TCCTCTTCTCCTCTGGCTACAGGGCGACAGTCCCGGCCCAGTTCAGAAGAACCTGCACAACCCTATTGTACAGTCACTAGAGGATCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 90 bp GTGGACGTCAGATGCCCAAGGCAAAGGGTTACCTGTAGCTATTTTTaGGCTCTTCCTGGCTTACCTGCATGCACACCTGTTGAGATGGGG +
Preference number: 5 (lower is better)
Translates to: VDVRCPRQRVTCSYF*ALPGLPACTPVEMG
Trigger: CCCCATCTCAACAGGTGTGCATGCAGGTAAGCCAGGAAGAGCCCAAAAATAGCTACAGGTAACCCTTTGCCTTGGGCATCTGACGTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS-3UTR CAA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGAGGACCTCAGAGGACTaGCCGCCCTGCGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: CHRAFQVEGFCILPREIQRTSED*PPCDSS
Trigger: GGAGGAGTCGCAGGGCGGCAAGTCCTCTGAGGTCCT...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACTCCTTGGCCAGCGCTTaGACCGCATCCTCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: DDRELTGSHTVCGMYINYSLASA*TASSLS
Trigger: GGAGAGCGAGGATGCGGTCAAAGCGCTGGCCAAGGA...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTTTCATCCGGTTGTCCTaGAGGTCCAGCTGGGAGCGC +
Preference number: 5 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLFIRLS*RSSWER
Trigger: GCGCTCCCAGCTGGACCTCAAGGACAACCGGATGAA...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACAGCTCCTTCATCCGGTaGTCCTTGAGGTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDSSFIR*SLRSSW
Trigger: CCAGCTGGACCTCAAGGACAACCGGATGAAGGAGCT...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AGACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACACTCCTGGTTGCCATaGAGCACCGTCTCGCCCGGC +
Preference number: 5 (lower is better)
Translates to: RRQRVDRFTHGLRYVHQLHSWLP*STVSPG
Trigger: GCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGTG...TAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAAACCACCCACTCCTGGTaGCCATTGAGCACCGTCTCG +
Preference number: 5 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQTTHSW*PLSTVS
Trigger: CGAGACGGTGCTCAATGGCAACCAGGAGTGGGTGGT...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACCGGTGTCGAGGGGAGTaGATGTCGCTCGGTGTGGAC +
Preference number: 5 (lower is better)
Translates to: DDRELTGSHTVCGMYINYRCRGE*MSLGVD
Trigger: GTCCACACCGAGCGACATCAACTCCCCTCGACACCG...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GACCACATCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATAGGTTCACACACGGTTaGCGGTATGTACATCAATTA +
Preference number: 5 (lower is better)
Translates to: DHILCQTGSRSSGLDEGHRFTHG*RYVHQL
Trigger: TAATTGATGTACATACCGCAAACCGTGTGTGAACCT...ATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGATGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACATCATGCTCAGGATTTaGGCCTGGGGGCGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: ADLEAELTFQVFPADKAHIMLRI*AWGRER
Trigger: CCTCTCTCGCCCCCAGGCCAAAATCCTGAGCATGAT...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376030.7
CDS-3UTR CAA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGATCCGCCAGTCTCCGGTaGGTGGCCGTGAGTTCGGCT +
Preference number: 5 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGSASLR*VAVSSA
Trigger: AGCCGAACTCACGGCCACCAACCGGAGACTGGCGGA...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGCGGATGCCTGTGGAGTaGGCTGGGTGGAAGACGGCG +
Preference number: 5 (lower is better)
Translates to: CHRAFQVEGFCILPREIQRMPVE*AGWKTA
Trigger: CGCCGTCTTCCACCCAGCCAACTCCACAGGCATCCG...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTCAGACCCCAAACTCATaGCCACACTCCATACCACTG +
Preference number: 5 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVAQTPNS*PHSIPL
Trigger: CAGTGGTATGGAGTGTGGCAATGAGTTTGGGGTCTG...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GGGGCCGTCGGTCATCCCCGATCCTGTTGTCCCAATAGCTTTCATTCTGGTGATCTGAGGCCCGAAGGCTaGAGTCAAACTGGTTTTCAA +
Preference number: 5 (lower is better)
Translates to: GAVGHPRSCCPNSFHSGDLRPEG*SQTGFQ
Trigger: TTGAAAACCAGTTTGACTCAAGCCTTCGGGCCTCAG...ATCACCAGAATGAAAGCTATTGGGACAACAGGATCGGGGATGACCGACGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCATGCCAGACTCAGAGGTaGCCATTGCCCACAGGCTTT +
Preference number: 5 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPCQTQR*PLPTGF
Trigger: AAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TGCCAGACTCAGAGGTTGCCATTGCCCACAGGCTTTCTTCTCCTTTCCTTTCACTGCCAGACTCAGAGGTaGCCATTGCCCACAGGCTTT +
Preference number: 5 (lower is better)
Translates to: CQTQRLPLPTGFLLLSFHCQTQR*PLPTGF
Trigger: AAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA...GTGAAAGGAAAGGAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGTCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACCTCGCTGGCCAGCCATaGGCAAGAATGCCAGACTCA +
Preference number: 5 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDLAGQP*ARMPDS
Trigger: TGAGTCTGGCATTCTTGCCAATGGCTGGCCAGCGAG...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CCA 90 bp AGATATCAAGAGAGGCAGCAGACAGTCCACTACCGTGGAGCTAATTaGATGCAGAGCTACAGCTCCAATTGGGGGCTGTCAGATTCCTCC +
Preference number: 5 (lower is better)
Translates to: RYQERQQTVHYRGAN*MQSYSSNWGLSDSS
Trigger: GGAGGAATCTGACAGCCCCCAATTGGAGCTGTAGCTCTGCATCCAATTAGCTCCACGGTAGTGGACTGTCTGCTGCCTCTCTTGATATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS-3UTR CAA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAAAGCTCCTTCATCCGGTaGTCCTTGAGGTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQSSFIR*SLRSSW
Trigger: CCAGCTGGACCTCAAGGACAACCGGATGAAGGAGCT...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACCGCTTGGGGACGTCCTaGGTCAGCGTAGCTAAGGAC +
Preference number: 5 (lower is better)
Translates to: DDRELTGSHTVCGMYINYRLGTS*VSVAKD
Trigger: GTCCTTAGCTACGCTGACCAAGGACGTCCCCAAGCG...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAAGTGGTAGAGAGTCTGTaGACTCTGCCGGATGGCTGC +
Preference number: 5 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQVVESL*TLPDGC
Trigger: GCAGCCATCCGGCAGAGTCAACAGACTCTCTACCAC...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGAACTACTTTGCACAGTaGGGTAGCAGCATGGTAACA +
Preference number: 5 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKNYFAQ*GSSMVT
Trigger: TGTTACCATGCTGCTACCCAACTGTGCAAAGTAGTT...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGAACTGTGGCCCTCCTTTaGAAGTGGGTGCCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRTVALL*KWVPPL
Trigger: TAGGGGAGGCACCCACTTCAAAAGGAGGGCCACAGT...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGAGGCCTTGGGCAGACCTaGCTGAACAGCTCACACATC +
Preference number: 5 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRGLGQT*LNSSHI
Trigger: GATGTGTGAGCTGTTCAGCAAGGTCTGCCCAAGGCC...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCAAGCGCGAGCTGCTTATaGTCTTCCATCATGCTCAGG +
Preference number: 5 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPSASCL*SSIMLR
Trigger: CCTGAGCATGATGGAAGACAATAAGCAGCTCGCGCT...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGGGGCCTCCTCCCACCTaGGCAGCTCCGTTTAAGGCT +
Preference number: 5 (lower is better)
Translates to: CHRAFQVEGFCILPREIQGPPPT*AAPFKA
Trigger: AGCCTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCC...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGCCCCATAACTTCCCATaGTCTCCTGAGAGGTTACAA +
Preference number: 5 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKPHNFP*SPERLQ
Trigger: TTGTAACCTCTCAGGAGACAATGGGAAGTTATGGGG...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCCCAGTGCAAACGGCCTaGAAGGAGGTCGAGCATCAT +
Preference number: 5 (lower is better)
Translates to: SGDRISASPRNVAAKPHSPVQTA*KEVEHH
Trigger: ATGATGCTCGACCTCCTTCAAGGCCGTTTGCACTGG...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGAAAGAGGCATTCGCGGTaGCCCGTGTTGCCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGKRHSR*PVLPQA
Trigger: GGCCTGAGGCAACACGGGCAACCGCGAATGCCTCTT...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCAACTCAGAGGTTGCCATaGCCCACAGGCTTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPTQRLP*PTGFLL
Trigger: GAGAAGAAAGCCTGTGGGCAATGGCAACCTCTGAGT...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CCA 90 bp AAAGAGAATGGGGCCTGCTCACTGAAACGCCTGTATGCAGACAACTaGCTTATCAAAGCACCCATTTCCTGGCAGCAGGAATGTGCCAAG +
Preference number: 5 (lower is better)
Translates to: KENGACSLKRLYADN*LIKAPISWQQECAK
Trigger: CTTGGCACATTCCTGCTGCCAGGAAATGGGTGCTTTGATAAGCCAGTTGTCTGCATACAGGCGTTTCAGTGAGCAGGCCCCATTCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS-3UTR CAA 90 bp AGACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTATTCATCCGGTTGTCCTaGAGGTCCAGCTGGGAGCGC +
Preference number: 5 (lower is better)
Translates to: RRQRVDRFTHGLRYVHQLFIRLS*RSSWER
Trigger: GCGCTCCCAGCTGGACCTCAAGGACAACCGGATGAA...TAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACAGCGCGAGCTGCTTATaGTCTTCCATCATGCTCAGG +
Preference number: 5 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDSASCL*SSIMLR
Trigger: CCTGAGCATGATGGAAGACAATAAGCAGCTCGCGCT...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGCGGCCAGCCTTGTACTaGAGACCGCTGCTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: CHRAFQVEGFCILPREIQRPALY*RPLLFS
Trigger: GGAGAACAGCAGCGGTCTCAAGTACAAGGCTGGCCG...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGTCAGGTGGAAGGATTTaGCATTCTCCCAAGAGAGAT +
Preference number: 5 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKSGGRI*HSPKRD
Trigger: ATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGA...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACCAGACCCCAAACTCATaGCCACACTCCATACCACTG +
Preference number: 5 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDQTPNS*PHSIPL
Trigger: CAGTGGTATGGAGTGTGGCAATGAGTTTGGGGTCTG...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGGGATTTATATGTTTCTaGAGCCCTGTTGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKGFICF*SPVGGS
Trigger: AGAGCCTCCAACAGGGCTCAAGAAACATATAAATCC...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GTCTCGGTTAGGACATTGGTGAGCTATGTCACCTATGTTTCAGGTGACAGGGACCCCCCAATTGTCCACTaGTCTCCAGCAAGATCGAAC +
Preference number: 5 (lower is better)
Translates to: VSVRTLVSYVTYVSGDRDPPIVH*SPARSN
Trigger: GTTCGATCTTGCTGGAGACAAGTGGACAATTGGGGG...GTCCCTGTCACCTGAAACATAGGTGACATAGCTCACCAATGTCCTAACCGAGAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AAGGGTGTTTTAGGGAACTGTGGGCCTCCTCCCACCTTGGCAGCTCCGTTTAAGGACCTTGAAGCAGAGTaGACGTTTCAGGTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: KGVLGNCGPPPTLAAPFKDLEAE*TFQVFP
Trigger: TGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTC...CTTAAACGGAGCTGCCAAGGTGGGAGGAGGCCCACAGTTCCCTAAAACACCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACCGCCTTCTGTTCTTCTaGCCGACCTTGAAGCAGAGT +
Preference number: 5 (lower is better)
Translates to: ADLEAELTFQVFPADKAHRLLFF*PTLKQS
Trigger: ACTCTGCTTCAAGGTCGGCAAGAAGAACAGAAGGCG...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCACCTGTGACAATCAGCTaGAGTCTCTCTGCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPPVTIS*SLSAKS
Trigger: AGACTTGGCAGAGAGACTCAAGCTGATTGTCACAGG...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGAGTGACGTCAAGCTTTaGGGTCCCTGTCCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: CHRAFQVEGFCILPREIQSDVKL*GPCPGA
Trigger: GGCCCCAGGACAGGGACCCAAAAGCTTGACGTCACT...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCAGATTCCATGGCTCTTTaGGGGTCTTTGGTGTTGGTC +
Preference number: 5 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPDSMAL*GSLVLV
Trigger: GACCAACACCAAAGACCCCAAAAGAGCCATGGAATC...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CAA 90 bp CACGGAGTGCAGATAGTGGGGTTTGGAATCTCAGTAAAGCCAAACCACAGGCCAAGCTGCTTGCATAAGTaGGCACTGCTGACCAAAGAC +
Preference number: 5 (lower is better)
Translates to: HGVQIVGFGISVKPNHRPSCLHK*ALLTKD
Trigger: GTCTTTGGTCAGCAGTGCCAACTTATGCAAGCAGCT...TGGCCTGTGGTTTGGCTTTACTGAGATTCCAAACCCCACTATCTGCACTCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CAA 90 bp TGCTACAATTCTGGCTCACTCTGTGGGAATAACTGCCTGCCTGGGCACGTTGCTTGGGAAATCTGGTCATaGAGGGTGTGCAATGATTGC +
Preference number: 5 (lower is better)
Translates to: CYNSGSLCGNNCLPGHVAWEIWS*RVCNDC
Trigger: GCAATCATTGCACACCCTCAATGACCAGATTTCCCA...AGCAACGTGCCCAGGCAGGCAGTTATTCCCACAGAGTGAGCCAGAATTGTAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS GCA 90 bp AGACAACTGGCTTATCAAAGCACCCATTTCCTGGCAGCAGGAATGTaGCAAGGCTATGGTGGGCAAAAGACTAGGACTGGGTCAAATGCA +
Preference number: 5 (lower is better)
Translates to: RQLAYQSTHFLAAGM*QGYGGQKTRTGSNA
Trigger: TGCATTTGACCCAGTCCTAGTCTTTTGCCCACCATAGCCTTGGCACATTCCTGCTGCCAGGAAATGGGTGCTTTGATAAGCCAGTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS GCA 90 bp CAGTCATTAGTCCAGGCTGCACTATTCTTGCTGGTGGACGTCAGATaGCCAAGGCAAAGGGTTACCTGTAGCTATTTTTGGGCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: QSLVQAALFLLVDVR*PRQRVTCSYFWALP
Trigger: AGGAAGAGCCCAAAAATAGCTACAGGTAACCCTTTGCCTTGGGCATCTGACGTCCACCAGCAAGAATAGTGCAGCCTGGACTAATGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 90 bp GGTCCCCACACCCAGACCCCAATATTTCATGTTAGAGCCTCGACATaGCTTCCAACTGTCCTCAGAAGCTCAACCCACCTTCAATTTACT +
Preference number: 5 (lower is better)
Translates to: GPHTQTPIFHVRAST*LPTVLRSSTHLQFT
Trigger: AGTAAATTGAAGGTGGGTTGAGCTTCTGAGGACAGTTGGAAGCCATGTCGAGGCTCTAACATGAAATATTGGGGTCTGGGTGTGGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 90 bp AAACGCCTGTATGCAGACAACTGGCTTATCAAAGCACCCATTTCCTaGCAGCAGGAATGTGCCAAGGCTATGGTGGGCAAAAGACTAGGA +
Preference number: 5 (lower is better)
Translates to: KRLYADNWLIKAPIS*QQECAKAMVGKRLG
Trigger: TCCTAGTCTTTTGCCCACCATAGCCTTGGCACATTCCTGCTGCCAGGAAATGGGTGCTTTGATAAGCCAGTTGTCTGCATACAGGCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS-3UTR CAA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGAGTGGTAGAGAGTCTGTaGACTCTGCCGGATGGCTGC +
Preference number: 5 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGVVESL*TLPDGC
Trigger: GCAGCCATCCGGCAGAGTCAACAGACTCTCTACCAC...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGTCCAGGAGTAGCGGTTaGGACGAGGGACATTTACAA +
Preference number: 5 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWSRSSG*DEGHLQ
Trigger: TTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGA...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp TCCTCTGCCAGACGGGCTCCAGGAGTAGCGGTTTGGACGAGGGACATTTACAAGGAAGGAAAGTGTTGTTaGTTCTTGAGACTTTGGACA +
Preference number: 5 (lower is better)
Translates to: SSARRAPGVAVWTRDIYKEGKCC*FLRLWT
Trigger: TGTCCAAAGTCTCAAGAACAAACAACACTTTCCTTC...CTTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGAGCCCGTCTGGCAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GACCCAAAGAAGGGGACCATGACTGTCAGCACTCTGCTCACTAAAGTCGTGTTCGGGGAATTGCCACAATaGATATCCTCTAACTGGCCT +
Preference number: 5 (lower is better)
Translates to: DPKKGTMTVSTLLTKVVFGELPQ*ISSNWP
Trigger: AGGCCAGTTAGAGGATATCAATTGTGGCAATTCCCC...GAACACGACTTTAGTGAGCAGAGTGCTGACAGTCATGGTCCCCTTCTTTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400798.6
CDS-3UTR CAA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGACCGCTGTTGGTCAGGTaGTCTGCGTACTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGPLLVR*SAYSFR
Trigger: CCTGAAGGAGTACGCAGACAACCTGACCAACAGCGG...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTTGGAAATCGGGATCTTaGCTGCTGAAGCCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLWKSGS*LLKPLP
Trigger: AGGAAGGGGCTTCAGCAGCAAAGATCCCGATTTCCA...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACCCCTGTTGGAGGCTCTaGGCAGGTCTGAACATTAAA +
Preference number: 5 (lower is better)
Translates to: ADLEAELTFQVFPADKAHPCWRL*AGLNIK
Trigger: TTTAATGTTCAGACCTGCCAAGAGCCTCCAACAGGG...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTATTGGGTCCAGATTGTaGTGTGGCTTCTCCCCTCCT +
Preference number: 5 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLIGSRL*CGFSPP
Trigger: AGGAGGGGAGAAGCCACACAACAATCTGGACCCAAT...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTTTCGCCACCCTTTCCTaGCAGTTTTTCTCAAACACC +
Preference number: 5 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPFATLS*QFFSNT
Trigger: GGTGTTTGAGAAAAACTGCAAGGAAAGGGTGGCGAA...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CAA 90 bp GTGACTCGCTTTGATAACCCGATGTGTAAGCAGAATCGCAATGCATCCGTCCTTGCTCTTTTGGGGTCTTaGGTGTTGGTCATGTGGCAG +
Preference number: 5 (lower is better)
Translates to: VTRFDNPMCKQNRNASVLALLGS*VLVMWQ
Trigger: CTGCCACATGACCAACACCAAAGACCCCAAAAGAGC...AAGGACGGATGCATTGCGATTCTGCTTACACATCGGGTTATCAAAGCGAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS CCA 90 bp TCTGATGAGGGCTCTGGGGAATTGCCACAATTGATATCCTCTAACTaGCCTCTCTTGAAGGCATCCAAAAAGCAGACGAGAGAAAGCCTG +
Preference number: 5 (lower is better)
Translates to: SDEGSGELPQLISSN*PLLKASKKQTRESL
Trigger: CAGGCTTTCTCTCGTCTGCTTTTTGGATGCCTTCAAGAGAGGCCAGTTAGAGGATATCAATTGTGGCAATTCCCCAGAGCCCTCATCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376028.8
ENST00000400798.6
CDS CCA 90 bp TTGGGTAGTTGTTTGACCCTGGCACGTCACTTCCCTGTCCTTGTGTaGAGAATGAAGATCACAATAGTATTCATCTCCCAGGGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: LGSCLTLARHFPVLV*RMKITIVFISQGCC
Trigger: ACAGCAGCCCTGGGAGATGAATACTATTGTGATCTTCATTCTCCACACAAGGACAGGGAAGTGACGTGCCAGGGTCAAACAACTACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400797.3
CDS CCA 90 bp GGGTCTTTGTCCTCCTCCAGTGCCTTCGACTTGGTGACAATAAAATaGGAAATCTGGTCATTGAGGGTGTGCAATGATTGCACAGCTGCT +
Preference number: 5 (lower is better)
Translates to: GSLSSSSAFDLVTIK*EIWSLRVCNDCTAA
Trigger: AGCAGCTGTGCAATCATTGCACACCCTCAATGACCAGATTTCCCATTTTATTGTCACCAAGTCGAAGGCACTGGAGGAGGACAAAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS-3UTR CAA 90 bp AGACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACACTCGTGTTTTCACTaGTTAGAGGCGCTCGGCCAC +
Preference number: 5 (lower is better)
Translates to: RRQRVDRFTHGLRYVHQLHSCFH*LEALGH
Trigger: GTGGCCGAGCGCCTCTAACAAGTGAAAACACGAGTG...TAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTTCCGCAATCTTCGTTTaGAAGAGAGCCATAGTCATC +
Preference number: 5 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPSAIFV*KRAIVI
Trigger: GATGACTATGGCTCTCTTCAAAACGAAGATTGCGGA...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp GCCGACCTTGAAGCAGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACCAACCCATCCTCATGTaGAGAAACCAGCTCCAAATG +
Preference number: 5 (lower is better)
Translates to: ADLEAELTFQVFPADKAHQPILM*RNQLQM
Trigger: CATTTGGAGCTGGTTTCTCAACATGAGGATGGGTTG...GTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTCGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS TCA 90 bp ATTAGCCACTCCAGGGCGTCTAAGTTCCTGTCCCAGTCTGTCCTCTaGGTTAGAGCTAGAGCTTGGTTAGACTTGGTGCTTTTCATAAAG +
Preference number: 5 (lower is better)
Translates to: ISHSRASKFLSQSVL*VRARAWLDLVLFIK
Trigger: CTTTATGAAAAGCACCAAGTCTAACCAAGCTCTAGCTCTAACTCAGAGGACAGACTGGGACAGGAACTTAGACGCCCTGGAGTGGCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS GCA 90 bp AGCCTACAGGTGTACAAAAGCCTTCACTACATCCCAGAATCAGTCTaGCCTGTCTGGAGCCCACAGATCCTTTGGATCAAAACAGTCATT +
Preference number: 5 (lower is better)
Translates to: SLQVYKSLHYIPESV*PVWSPQILWIKTVI
Trigger: AATGACTGTTTTGATCCAAAGGATCTGTGGGCTCCAGACAGGGCAGACTGATTCTGGGATGTAGTGAAGGCTTTTGTACACCTGTAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 90 bp TACATCCCAGAATCAGTCTGCCCTGTCTGGAGCCCACAGATCCTTTaGATCAAAACAGTCATTACTAGGGAGACTCCTGGTGGTTATTTC +
Preference number: 5 (lower is better)
Translates to: YIPESVCPVWSPQIL*IKTVITRETPGGYF
Trigger: GAAATAACCACCAGGAGTCTCCCTAGTAATGACTGTTTTGATCCAAAGGATCTGTGGGCTCCAGACAGGGCAGACTGATTCTGGGATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 90 bp GTGTACAAAAGCCTTCACTACATCCCAGAATCAGTCTGCCCTGTCTaGAGCCCACAGATCCTTTGGATCAAAACAGTCATTACTAGGGAG +
Preference number: 5 (lower is better)
Translates to: VYKSLHYIPESVCPV*SPQILWIKTVITRE
Trigger: CTCCCTAGTAATGACTGTTTTGATCCAAAGGATCTGTGGGCTCCAGACAGGGCAGACTGATTCTGGGATGTAGTGAAGGCTTTTGTACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS-3UTR CAA 90 bp TTTGCACACTGCTTCAACCTAAAGAGTTGGAGCGAACTAGCTCTATATCATTTCATGTCTCGAACCCACTaGAGCACCCGCTGGTTGGTC +
Preference number: 5 (lower is better)
Translates to: FAHCFNLKSWSELALYHFMSRTH*STRWLV
Trigger: GACCAACCAGCGGGTGCTCAAGTGGGTTCGAGACAT...GAAATGATATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAGCAGTGTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACAAAGGGGCCTCTTCAACCTAAAGAGTaGGAGCGAACTAGCTCTATA +
Preference number: 5 (lower is better)
Translates to: RQTDFQKKGPAQPRTKGPLQPKE*ERTSSI
Trigger: TATAGAGCTAGTTCGCTCCAACTCTTTAGGTTGAAG...AGGCCCCTTTGTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CGATGCCAACAGACAGACAGATTTCCAAAAGAAAGGTCCGGCTCAGCCAAGGACCTACCAACTAGACATTaGGTCTCAGACAGCAAGAAA +
Preference number: 5 (lower is better)
Translates to: RCQQTDRFPKERSGSAKDLPTRH*VSDSKK
Trigger: TTTCTTGCTGTCTGAGACCAAATGTCTAGTTGGTAG...GTCCTTGGCTGAGCCGGACCTTTCTTTTGGAAATCTGTCTGTCTGTTGGCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCCTTCTCTCCACTTTATaGGGTCCAGATTGTTGTGTG +
Preference number: 5 (lower is better)
Translates to: SGDRISASPRNVAAKPHSLLSTL*GPDCCV
Trigger: CACACAACAATCTGGACCCAATAAAGTGGAGAGAAG...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 90 bp TCATCAAGAGCTAGGCAGCTAGGGCCTTTGCCTCCTGGGAGCTGGTaGCCAGTATGCAATCAAAAAGTGTTTGATGAAATAAACAAAGGA +
Preference number: 5 (lower is better)
Translates to: SSRARQLGPLPPGSW*PVCNQKVFDEINKG
Trigger: TCCTTTGTTTATTTCATCAAACACTTTTTGATTGCATACTGGGCACCAGCTCCCAGGAGGCAAAGGCCCTAGCTGCCTAGCTCTTGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS-3UTR CAA 90 bp CCGTCCCCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGAGGTTCACACACGGTTaGCGGTATGTACATCAATTA +
Preference number: 5 (lower is better)
Translates to: PSPGIKIHTVPLLVKPLWRFTHG*RYVHQL
Trigger: TAATTGATGTACATACCGCAAACCGTGTGTGAACCT...CCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGGGGACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp AGACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTATCCAGGAGTAGCGGTTaGGACGAGGGACATTTACAA +
Preference number: 5 (lower is better)
Translates to: RRQRVDRFTHGLRYVHQLSRSSG*DEGHLQ
Trigger: TTGTAAATGTCCCTCGTCCAAACCGCTACTCCTGGA...TAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGACAGAAAAAGCAAGCTTaGAAATCCAATGGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRQKKQA*KSNGPW
Trigger: CCAGGGACCATTGGATTTCAAAGCTTGCTTTTTCTG...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp ATGTACATCAATTACAGAGGTGGCGACGCAGGGGAGAGAGGTTCACACTCGTGTGTCAGAAGGAAAGTGTaGTTTGTTCTTGAGACTTTG +
Preference number: 5 (lower is better)
Translates to: MYINYRGGDAGERGSHSCVRRKV*FVLETL
Trigger: CAAAGTCTCAAGAACAAACAACACTTTCCTTCTGAC...ACACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGACTGAGGCCCGAAGGCTaGAGTCAAACTGGTTTTCAA +
Preference number: 5 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGLRPEG*SQTGFQ
Trigger: TTGAAAACCAGTTTGACTCAAGCCTTCGGGCCTCAG...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TCTGGTGATAGGATATCTGCATCTCCTAGAAATGTGGCTGCTAAGCCCCACTCCAAACAATTTGCCAGGTaGAAGAACACACGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: SGDRISASPRNVAAKPHSKQFAR*KNTRFE
Trigger: CTCAAAGCGTGTGTTCTTCAACCTGGCAAATTGTTT...GGAGTGGGGCTTAGCAGCCACATTTCTAGGAGATGCAGATATCCTATCACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGCGCCTTCTGTTCTTCTaGCCGACCTTGAAGCAGAGT +
Preference number: 5 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILRLLFF*PTLKQS
Trigger: ACTCTGCTTCAAGGTCGGCAAGAAGAACAGAAGGCG...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 90 bp GATAGGAACATCTTTGCCAAATCTATGGGTAAAGAGAATGGGGCCTaGTCACTGAAACGCCTGTATGCAGACAACTGGCTTATCAAAGCA +
Preference number: 5 (lower is better)
Translates to: DRNIFAKSMGKENGA*SLKRLYADNWLIKA
Trigger: TGCTTTGATAAGCCAGTTGTCTGCATACAGGCGTTTCAGTGAGCAGGCCCCATTCTCTTTACCCATAGATTTGGCAAAGATGTTCCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 90 bp GGATTTTGGCCTGAGCATCCATTAAGAGGTGCCTCATCAATATCATaGAACTCTTCAGAGTCTCCTTCTCAGTGGGTAGAAAAGGGTCTT +
Preference number: 5 (lower is better)
Translates to: GFWPEHPLRGASSIS*NSSESPSQWVEKGL
Trigger: AAGACCCTTTTCTACCCACTGAGAAGGAGACTCTGAAGAGTTCCATGATATTGATGAGGCACCTCTTAATGGATGCTCAGGCCAAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS-3UTR CAA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGATTTGTTCTTGAGACTTaGGACACAATGTCCTATGCC +
Preference number: 5 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWRFVLET*DTMSYA
Trigger: GGCATAGGACATTGTGTCCAAAGTCTCAAGAACAAA...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS GCA 90 bp AAAACAGTCATTACTAGGGAGACTCCTGGTGGTTATTTCTGGAATTaGAAGCATAATGCCAAGGTCCGTCAACCTTCTCCAACCTCTCTA +
Preference number: 5 (lower is better)
Translates to: KTVITRETPGGYFWN*KHNAKVRQPSPTSL
Trigger: TAGAGAGGTTGGAGAAGGTTGACGGACCTTGGCATTATGCTTGCAATTCCAGAAATAACCACCAGGAGTCTCCCTAGTAATGACTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 90 bp TGGATGACTTCTGAGCATCCATTAAGAGGTGCCTCATCAATATCATaGAACTCTTCAGAGTCTCCTTCTCAGTGGGTAGAAAAGGGTCTT +
Preference number: 5 (lower is better)
Translates to: WMTSEHPLRGASSIS*NSSESPSQWVEKGL
Trigger: AAGACCCTTTTCTACCCACTGAGAAGGAGACTCTGAAGAGTTCCATGATATTGATGAGGCACCTCTTAATGGATGCTCAGAAGTCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636564.1
CDS-3UTR CAA 90 bp GACGACAGAGAGTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACTTTGTTCTTGAGACTTaGGACACAATGTCCTATGCC +
Preference number: 5 (lower is better)
Translates to: DDRELTGSHTVCGMYINYFVLET*DTMSYA
Trigger: GGCATAGGACATTGTGTCCAAAGTCTCAAGAACAAA...GTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAACTCTCTGTCGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp GTTGACAGGTTCACACACGGTTTGCGGTATGTACATCAATTACAGAGGTGGCGAGAAGGAAAGTGTTGTTaGTTCTTGAGACTTTGGACA +
Preference number: 5 (lower is better)
Translates to: VDRFTHGLRYVHQLQRWREGKCC*FLRLWT
Trigger: TGTCCAAAGTCTCAAGAACAAACAACACTTTCCTTC...TCGCCACCTCTGTAATTGATGTACATACCGCAAACCGTGTGTGAACCTGTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp CCTGGCATTAAAATACACACAGTTCCTTTGCTGGTGAAGCCTCTTTGGGGCCAAGTCAGAAGGAAAGTGTaGTTTGTTCTTGAGACTTTG +
Preference number: 5 (lower is better)
Translates to: PGIKIHTVPLLVKPLWGQVRRKV*FVLETL
Trigger: CAAAGTCTCAAGAACAAACAACACTTTCCTTCTGAC...TTGGCCCCAAAGAGGCTTCACCAGCAAAGGAACTGTGTGTATTTTAATGCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361144.9
ENST00000400798.6
CDS-3UTR CAA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGTCCGCAATCTTCGTTTaGAAGAGAGCCATAGTCATC +
Preference number: 5 (lower is better)
Translates to: CHRAFQVEGFCILPREIQSAIFV*KRAIVI
Trigger: GATGACTATGGCTCTCTTCAAAACGAAGATTGCGGA...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGATCAGGTGGAAGGATTTaGCATTCTCCCAAGAGAGAT +
Preference number: 5 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGSGGRI*HSPKRD
Trigger: ATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGA...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp CTGGTTTTCAAGGCTGTGCTCATGGGATTTATATGTTTCTTGAGCCCTGTTGGAGCCATTTCTGACAAGTaGGGTGAACGTTGGTTTCAA +
Preference number: 5 (lower is better)
Translates to: LVFKAVLMGFICFLSPVGAISDK*GERWFQ
Trigger: TTGAAACCAACGTTCACCCAACTTGTCAGAAATGGC...TCCAACAGGGCTCAAGAAACATATAAATCCCATGAGCACAGCCTTGAAAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGGACCTTGAAGCAGAGTaGACGTTTCAGGTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: CHRAFQVEGFCILPREIQDLEAE*TFQVFP
Trigger: TGGAAAAACCTGAAACGTCAACTCTGCTTCAAGGTC...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp TGTCACAGAGCTTTTCAGGTGGAAGGATTTTGCATTCTCCCAAGAGAGATTCAGAAACAATTTGCCAGGTaGAAGAACACACGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: CHRAFQVEGFCILPREIQKQFAR*KNTRFE
Trigger: CTCAAAGCGTGTGTTCTTCAACCTGGCAAATTGTTT...CTGAATCTCTCTTGGGAGAATGCAAAATCCTTCCACCTGAAAAGCTCTGTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS-3UTR CAA 90 bp AGAGTTGACGTTTCAGGTTTTTCCAGCAGACAAAGCTCACTCAATCTGATACTGGCCATTTCTGACAAGTaGGGTGAACGTTGGTTTCAA +
Preference number: 5 (lower is better)
Translates to: RVDVSGFSSRQSSLNLILAISDK*GERWFQ
Trigger: TTGAAACCAACGTTCACCCAACTTGTCAGAAATGGC...CAGTATCAGATTGAGTGAGCTTTGTCTGCTGGAAAAACCTGAAACGTCAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CCA 90 bp TTGCAAACAGAATCCATTCTGAAGGCAGCTAAGATAGTTCCACTCTaGATAGGAACATCTTTGCCAAATCTATGGGTAAAGAGAATGGGG +
Preference number: 5 (lower is better)
Translates to: LQTESILKAAKIVPL*IGTSLPNLWVKRMG
Trigger: CCCCATTCTCTTTACCCATAGATTTGGCAAAGATGTTCCTATCCAGAGTGGAACTATCTTAGCTGCCTTCAGAATGGATTCTGTTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS GCA 72 bp GCGTCTCAGTCCAGGGAGGCAGGCAGGGCGCGAGGCTaGCCCAGGGTCCCCGGGGAGCTGGCCTTGCTGGCG +
Preference number: 6 (lower is better)
Translates to: ASQSREAGRARG*PRVPGELALLA
Trigger: CGCCAGCAAGGCCAGCTCCCCGGGGACCCTGGGGCAGCCTCGCGCCCTGCCTGCCTCCCTGGACTGAGACGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS GCA 72 bp CTCAGTCCGGCCGGACGCCGGGCGGTCCGCGCCTGCTaGACGCGAGGAATTCGGCCGCGGAGCCTCTCACGT +
Preference number: 6 (lower is better)
Translates to: LSPAGRRAVRAC*TRGIRPRSLSR
Trigger: ACGTGAGAGGCTCCGCGGCCGAATTCCTCGCGTGCAGCAGGCGCGGACCGCCCGGCGTCCGGCCGGACTGAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361144.9
CDS GCA 72 bp GCTCTCAGTCCGGCCGGACGCCGGGCGGTCCGCGCCTaGTGCACGCGAGGAATTCGGCCGCGGAGCCTCTCA +
Preference number: 6 (lower is better)
Translates to: ALSPAGRRAVRA*CTRGIRPRSLS
Trigger: TGAGAGGCTCCGCGGCCGAATTCCTCGCGTGCAGCAGGCGCGGACCGCCCGGCGTCCGGCCGGACTGAGAGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361144.9
CDS GCA 72 bp CCGGCTGTGTTCCAGCACCAGCTGCCGGCAGAGCGCTaGCCAGGCCCCGCGGCGTCTCAGTCCAGGGAGGCA +
Preference number: 6 (lower is better)
Translates to: PAVFQHQLPAER*PGPAASQSREA
Trigger: TGCCTCCCTGGACTGAGACGCCGCGGGGCCTGGGCAGCGCTCTGCCGGCAGCTGGTGCTGGAACACAGCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS CAA 72 bp GGGCCGCCGCCGCCGCTCAGTTCCGCCAGTCTCCGGTaGGTGGCCGTGAGTTCGGCTCGCAGGTTGGTCACC +
Preference number: 6 (lower is better)
Translates to: GPPPPLSSASLR*VAVSSARRLVT
Trigger: GGTGACCAACCTGCGAGCCGAACTCACGGCCACCAACCGGAGACTGGCGGAACTGAGCGGCGGCGGCGGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376030.7
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CCA 72 bp GCGGTCAGCGGGAGGTCCGCCTGCACCACCCACTCCTaGTTGCCATTGAGCACCGTCTCGCCCGGCATGGCG +
Preference number: 6 (lower is better)
Translates to: AVSGRSACTTHS*LPLSTVSPGMA
Trigger: CGCCATGCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGTGGGTGGTGCAGGCGGACCTCCCGCTGACCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CAA 90 bp GCGGTCAGCGGGAGGTCCGCCTGCACCACCCACTCCTGGTTGCCATaGAGCACCGTCTCGCCCGGCATGGCGAGGGAATGCCGCTTGGGG +
Preference number: 6 (lower is better)
Translates to: AVSGRSACTTHSWLP*STVSPGMARECRLG
Trigger: CCCCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGTGGGTGGTGCAGGCGGACCTCCCGCTGACCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CAA 90 bp ATGGCTGCGGTCAGCGGGAGGTCCGCCTGCACCACCCACTCCTGGTaGCCATTGAGCACCGTCTCGCCCGGCATGGCGAGGGAATGCCGC +
Preference number: 6 (lower is better)
Translates to: MAAVSGRSACTTHSW*PLSTVSPGMARECR
Trigger: GCGGCATTCCCTCGCCATGCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGTGGGTGGTGCAGGCGGACCTCCCGCTGACCGCAGCCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CCA 72 bp GTGGCCGTGAGTTCGGCTCGCAGGTTGGTCACCTCCTaGCTGGCCGACTGGACCGCCCCATCGATGCGGAGC +
Preference number: 6 (lower is better)
Translates to: VAVSSARRLVTS*LADWTAPSMRS
Trigger: GCTCCGCATCGATGGGGCGGTCCAGTCGGCCAGCCAGGAGGTGACCAACCTGCGAGCCGAACTCACGGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376030.7
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CAA 72 bp TGGGAGCGCAGTGCCGTGGCGTGGTCTGTGGCCTCCTaGGCTTGGCGCCGCAGCTCCCACTTCTCACGCTCC +
Preference number: 6 (lower is better)
Translates to: WERSAVAWSVAS*AWRRSSHFSRS
Trigger: GGAGCGTGAGAAGTGGGAGCTGCGGCGCCAAGCCAAGGAGGCCACAGACCACGCCACGGCACTGCGCTCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361144.9
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CAA 72 bp GTCAGCGGGAGGTCCGCCTGCACCACCCACTCCTGGTaGCCATTGAGCACCGTCTCGCCCGGCATGGCGAGG +
Preference number: 6 (lower is better)
Translates to: VSGRSACTTHSW*PLSTVSPGMAR
Trigger: CCTCGCCATGCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGTGGGTGGTGCAGGCGGACCTCCCGCTGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CAA 90 bp AGTTCCGCCAGTCTCCGGTTGGTGGCCGTGAGTTCGGCTCGCAGGTaGGTCACCTCCTGGCTGGCCGACTGGACCGCCCCATCGATGCGG +
Preference number: 6 (lower is better)
Translates to: SSASLRLVAVSSARR*VTSWLADWTAPSMR
Trigger: CCGCATCGATGGGGCGGTCCAGTCGGCCAGCCAGGAGGTGACCAACCTGCGAGCCGAACTCACGGCCACCAACCGGAGACTGGCGGAACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376030.7
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS TCA 72 bp GGAGGTCCGCCTGCACCACCCACTCCTGGTTGCCATTaGGCACCGTCTCGCCCGGCATGGCGAGGGAATGCC +
Preference number: 6 (lower is better)
Translates to: GGPPAPPTPGCH*APSRPAWRGNA
Trigger: GGCATTCCCTCGCCATGCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGTGGGTGGTGCAGGCGGACCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS TCA 72 bp CGCCGCTCAGTTCCGCCAGTCTCCGGTTGGTGGCCGTaGGTTCGGCTCGCAGGTTGGTCACCTCCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: RRSVPPVSGWWP*VRLAGWSPPGW
Trigger: CCAGCCAGGAGGTGACCAACCTGCGAGCCGAACTCACGGCCACCAACCGGAGACTGGCGGAACTGAGCGGCG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376030.7
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS GCA 72 bp CTCTGCCGGATGGCTGCGGTCAGCGGGAGGTCCGCCTaGACCACCCACTCCTGGTTGCCATTGAGCACCGTC +
Preference number: 6 (lower is better)
Translates to: LCRMAAVSGRSA*TTHSWLPLSTV
Trigger: GACGGTGCTCAATGGCAACCAGGAGTGGGTGGTGCAGGCGGACCTCCCGCTGACCGCAGCCATCCGGCAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS GCA 72 bp CGCCGGTGCAGGGAGCTGCACACCCCAAGGCCCAGCTaGAGGTCCTCGTCACTCAGGCTCAGCAGCACCTTC +
Preference number: 6 (lower is better)
Translates to: RRCRELHTPRPS*RSSSLRLSSTF
Trigger: GAAGGTGCTGCTGAGCCTGAGTGACGAGGACCTGCAGCTGGGCCTTGGGGTGTGCAGCTCCCTGCACCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CCA 72 bp TCGGCTCGCAGGTTGGTCACCTCCTGGCTGGCCGACTaGACCGCCCCATCGATGCGGAGCGCGAGCTGCTTA +
Preference number: 6 (lower is better)
Translates to: SARRLVTSWLAD*TAPSMRSASCL
Trigger: TAAGCAGCTCGCGCTCCGCATCGATGGGGCGGTCCAGTCGGCCAGCCAGGAGGTGACCAACCTGCGAGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376030.7
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CCA 72 bp ACCTCCAGCCAGGCCTGGACGGTGCCCGCCTTCCAGTaGGACATAGGGGTGGTCCTCACCAGCTCCACCTGC +
Preference number: 6 (lower is better)
Translates to: TSSQAWTVPAFQ*DIGVVLTSSTC
Trigger: GCAGGTGGAGCTGGTGAGGACCACCCCTATGTCCCACTGGAAGGCGGGCACCGTCCAGGCCTGGCTGGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CAA 72 bp GCCAGCTCGGCCTCCAGCTCCTTCATCCGGTTGTCCTaGAGGTCCAGCTGGGAGCGCAGTGCCGTGGCGTGG +
Preference number: 6 (lower is better)
Translates to: ASSASSSFIRLS*RSSWERSAVAW
Trigger: CCACGCCACGGCACTGCGCTCCCAGCTGGACCTCAAGGACAACCGGATGAAGGAGCTGGAGGCCGAGCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361144.9
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CAA 72 bp GGGAGGTCCGCCTGCACCACCCACTCCTGGTTGCCATaGAGCACCGTCTCGCCCGGCATGGCGAGGGAATGC +
Preference number: 6 (lower is better)
Translates to: GRSACTTHSWLP*STVSPGMAREC
Trigger: GCATTCCCTCGCCATGCCGGGCGAGACGGTGCTCAATGGCAACCAGGAGTGGGTGGTGCAGGCGGACCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS TCA 72 bp CCAGCTCGGCCTCCAGCTCCTTCATCCGGTTGTCCTTaGGGTCCAGCTGGGAGCGCAGTGCCGTGGCGTGGT +
Preference number: 6 (lower is better)
Translates to: PARPPAPSSGCP*GPAGSAVPWRG
Trigger: ACCACGCCACGGCACTGCGCTCCCAGCTGGACCTCAAGGACAACCGGATGAAGGAGCTGGAGGCCGAGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361144.9
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CAA 72 bp ACCCTGAGCTCGGTGGCCGAGAGGACCTCAGAGGACTaGCCGCCCTGCGACTCCTCCAGGTCCTTCGCCAAC +
Preference number: 6 (lower is better)
Translates to: TLSSVAERTSED*PPCDSSRSFAN
Trigger: GTTGGCGAAGGACCTGGAGGAGTCGCAGGGCGGCAAGTCCTCTGAGGTCCTCTCGGCCACCGAGCTCAGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361144.9
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CAA 90 bp ACCGTCTCGCCCGGCATGGCGAGGGAATGCCGCTTGGGGACGTCCTaGGTCAGCGTAGCTAAGGACTGTTTGGCCATGGCCAGCTCGGCC +
Preference number: 6 (lower is better)
Translates to: TVSPGMARECRLGTS*VSVAKDCLAMASSA
Trigger: GGCCGAGCTGGCCATGGCCAAACAGTCCTTAGCTACGCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CAA 90 bp GGACTGTCGCCGTTGCAGAGGGAGTGTGTCCGGTGTCGAGGGGAGTaGATGTCGCTCGGTGTGGACGACCGGTCGCCTTCGGCGGCAGAT +
Preference number: 6 (lower is better)
Translates to: GLSPLQRECVRCRGE*MSLGVDDRSPSAAD
Trigger: ATCTGCCGCCGAAGGCGACCGGTCGTCCACACCGAGCGACATCAACTCCCCTCGACACCGGACACACTCCCTCTGCAACGGCGACAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000503743.5
ENST00000636203.1
CDS CAA 90 bp TGCTTCCCACTGGGGATGCCCAGGGCAGTGGCCATGGCCTCGGCATaGAATGTGGGCTCCAGCACCAGCACAGCACCATGGACGCCGCTG +
Preference number: 6 (lower is better)
Translates to: CFPLGMPRAVAMASA*NVGSSTSTAPWTPL
Trigger: CAGCGGCGTCCATGGTGCTGTGCTGGTGCTGGAGCCCACATTCAATGCCGAGGCCATGGCCACTGCCCTGGGCATCCCCAGTGGGAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS TCA 72 bp CGTTGCAGAGGGAGTGTGTCCGGTGTCGAGGGGAGTTaGTGTCGCTCGGTGTGGACGACCGGTCGCCTTCGG +
Preference number: 6 (lower is better)
Translates to: RCRGSVSGVEGS*CRSVWTTGRLR
Trigger: CCGAAGGCGACCGGTCGTCCACACCGAGCGACATCAACTCCCCTCGACACCGGACACACTCCCTCTGCAACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS GCA 72 bp GTACCATCAAAGAGGCCGGGGTCGAGGGACTTCCGCTaGTTCCCTCTGGCGAAGACGCGGGAGATGGAGCCG +
Preference number: 6 (lower is better)
Translates to: VPSKRPGSRDFR*FPLAKTREMEP
Trigger: CGGCTCCATCTCCCGCGTCTTCGCCAGAGGGAAGCAGCGGAAGTCCCTCGACCCCGGCCTCTTTGATGGTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361144.9
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
CDS GCA 72 bp GAGTCATCAAAGAGGCCGGGGTCGAGGGACTTCCGCTaGTTCCCTCTGGCGAAGACGCGGGAGATGGAGCCG +
Preference number: 6 (lower is better)
Translates to: ESSKRPGSRDFR*FPLAKTREMEP
Trigger: CGGCTCCATCTCCCGCGTCTTCGCCAGAGGGAAGCAGCGGAAGTCCCTCGACCCCGGCCTCTTTGATGACTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 72 bp TCCATCTGCTCCTCGCCTTCCGACAGGCTGAGGCTCTaGCGCGTGGGGCTGCACTGGCTGTCCGAGTCATCA +
Preference number: 6 (lower is better)
Translates to: SICSSPSDRLRL*RVGLHWLSESS
Trigger: TGATGACTCGGACAGCCAGTGCAGCCCCACGCGGCAGAGCCTCAGCCTGTCGGAAGGCGAGGAGCAGATGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 72 bp CAGTGGGACATAGGGGTGGTCCTCACCAGCTCCACCTaGTGCAGCCGGTCCATCTGCTCCTCGCCTTCCGAC +
Preference number: 6 (lower is better)
Translates to: QWDIGVVLTSST*CSRSICSSPSD
Trigger: GTCGGAAGGCGAGGAGCAGATGGACCGGCTGCAGCAGGTGGAGCTGGTGAGGACCACCCCTATGTCCCACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 72 bp GCGCTCATCTCCTCTGCCAGGTGTCTCCGGAGGATGTaGTTCCCACTGGGGATGCCCAGGGCAGTGGCCATG +
Preference number: 6 (lower is better)
Translates to: ALISSARCLRRM*FPLGMPRAVAM
Trigger: CATGGCCACTGCCCTGGGCATCCCCAGTGGGAAGCACATCCTCCGGAGACACCTGGCAGAGGAGATGAGCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CCA 72 bp TTGGCTCTGGCTAGCTCCTGCTCCTTCTGGGCCAGCTaGACCCTGAGCTCGGTGGCCGAGAGGACCTCAGAG +
Preference number: 6 (lower is better)
Translates to: LALASSCSFWAS*TLSSVAERTSE
Trigger: CTCTGAGGTCCTCTCGGCCACCGAGCTCAGGGTCCAGCTGGCCCAGAAGGAGCAGGAGCTAGCCAGAGCCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361144.9
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CCA 72 bp TCCAGCTCCTTCATCCGGTTGTCCTTGAGGTCCAGCTaGGAGCGCAGTGCCGTGGCGTGGTCTGTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: SSSFIRLSLRSS*ERSAVAWSVAS
Trigger: GGAGGCCACAGACCACGCCACGGCACTGCGCTCCCAGCTGGACCTCAAGGACAACCGGATGAAGGAGCTGGA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361144.9
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CCA 72 bp GGTGTGAGTGGTAGAGAGTCTGTTGACTCTGCCGGATaGCTGCGGTCAGCGGGAGGTCCGCCTGCACCACCC +
Preference number: 6 (lower is better)
Translates to: GVSGRESVDSAG*LRSAGGPPAPP
Trigger: GGGTGGTGCAGGCGGACCTCCCGCTGACCGCAGCCATCCGGCAGAGTCAACAGACTCTCTACCACTCACACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CCA 72 bp AGAGGCCGGGGTCGAGGGACTTCCGCTGCTTCCCTCTaGCGAAGACGCGGGAGATGGAGCCGAATCCCATCT +
Preference number: 6 (lower is better)
Translates to: RGRGRGTSAASL*RRRGRWSRIPS
Trigger: AGATGGGATTCGGCTCCATCTCCCGCGTCTTCGCCAGAGGGAAGCAGCGGAAGTCCCTCGACCCCGGCCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CAA 72 bp CCGTTGCAGAGGGAGTGTGTCCGGTGTCGAGGGGAGTaGATGTCGCTCGGTGTGGACGACCGGTCGCCTTCG +
Preference number: 6 (lower is better)
Translates to: PLQRECVRCRGE*MSLGVDDRSPS
Trigger: CGAAGGCGACCGGTCGTCCACACCGAGCGACATCAACTCCCCTCGACACCGGACACACTCCCTCTGCAACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000503743.5
ENST00000636203.1
CDS CAA 72 bp CTGGGGATGCCCAGGGCAGTGGCCATGGCCTCGGCATaGAATGTGGGCTCCAGCACCAGCACAGCACCATGG +
Preference number: 6 (lower is better)
Translates to: LGMPRAVAMASA*NVGSSTSTAPW
Trigger: CCATGGTGCTGTGCTGGTGCTGGAGCCCACATTCAATGCCGAGGCCATGGCCACTGCCCTGGGCATCCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CAA 90 bp GCTGGCCTTACGTTGCAGAGGGAGTGTGTCCGGTGTCGAGGGGAGTaGATGTCGCTCGGTGTGGACGACCGGTCGCCTTCGGCGGCAGAT +
Preference number: 6 (lower is better)
Translates to: AGLTLQRECVRCRGE*MSLGVDDRSPSAAD
Trigger: ATCTGCCGCCGAAGGCGACCGGTCGTCCACACCGAGCGACATCAACTCCCCTCGACACCGGACACACTCCCTCTGCAACGTAAGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS TCA 72 bp TGGGGATGCCCAGGGCAGTGGCCATGGCCTCGGCATTaGATGTGGGCTCCAGCACCAGCACAGCACCATGGA +
Preference number: 6 (lower is better)
Translates to: WGCPGQWPWPRH*MWAPAPAQHHG
Trigger: TCCATGGTGCTGTGCTGGTGCTGGAGCCCACATTCAATGCCGAGGCCATGGCCACTGCCCTGGGCATCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 72 bp CCATTGAGCACCGTCTCGCCCGGCATGGCGAGGGAATaGCGCTTGGGGACGTCCTTGGTCAGCGTAGCTAAG +
Preference number: 6 (lower is better)
Translates to: PLSTVSPGMARE*RLGTSLVSVAK
Trigger: CTTAGCTACGCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGGTGCTCAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CCA 72 bp CGGCGCTCCTGGAGGGCCTCCCTGCTGAAGTTCACTTaGTACAGCAGCTCGATCCCCAGCAGGATGCTGACC +
Preference number: 6 (lower is better)
Translates to: RRSWRASLLKFT*YSSSIPSRMLT
Trigger: GGTCAGCATCCTGCTGGGGATCGAGCTGCTGTACCAAGTGAACTTCAGCAGGGAGGCCCTCCAGGAGCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CAA 72 bp CCCGGCATGGCGAGGGAATGCCGCTTGGGGACGTCCTaGGTCAGCGTAGCTAAGGACTGTTTGGCCATGGCC +
Preference number: 6 (lower is better)
Translates to: PGMARECRLGTS*VSVAKDCLAMA
Trigger: GGCCATGGCCAAACAGTCCTTAGCTACGCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCGCCATGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CAA 72 bp AGCACCGTCTCGCCCGGCATGGCGAGGGAATGCCGCTaGGGGACGTCCTTGGTCAGCGTAGCTAAGGACTGT +
Preference number: 6 (lower is better)
Translates to: STVSPGMARECR*GTSLVSVAKDC
Trigger: ACAGTCCTTAGCTACGCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CAA 72 bp CCGGCGCTCCTGGAGGGCCTCCCTGCTGAAGTTCACTaGGTACAGCAGCTCGATCCCCAGCAGGATGCTGAC +
Preference number: 6 (lower is better)
Translates to: PALLEGLPAEVH*VQQLDPQQDAD
Trigger: GTCAGCATCCTGCTGGGGATCGAGCTGCTGTACCAAGTGAACTTCAGCAGGGAGGCCCTCCAGGAGCGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CAA 72 bp ACGTTGCAGAGGGAGTGTGTCCGGTGTCGAGGGGAGTaGATGTCGCTCGGTGTGGACGACCGGTCGCCTTCG +
Preference number: 6 (lower is better)
Translates to: TLQRECVRCRGE*MSLGVDDRSPS
Trigger: CGAAGGCGACCGGTCGTCCACACCGAGCGACATCAACTCCCCTCGACACCGGACACACTCCCTCTGCAACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS TCA 72 bp CCTCGCTCTCCTTGCGGTGCTGCTCATAGTTGCGGATaGAGTCTCGGAGCTGCTCCTCGCGGCTCTCCAGTG +
Preference number: 6 (lower is better)
Translates to: PRSPCGAAHSCG*SLGAAPRGSPV
Trigger: CACTGGAGAGCCGCGAGGAGCAGCTCCGAGACTTCATCCGCAACTATGAGCAGCACCGCAAGGAGAGCGAGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361144.9
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS TCA 72 bp CACGCTCCAGCAGGTCCTTCTCCTTGGCCAGCGCTTTaGCCGCATCCTCGCTCTCCTTGCGGTGCTGCTCAT +
Preference number: 6 (lower is better)
Translates to: HAPAGPSPWPAL*PHPRSPCGAAH
Trigger: ATGAGCAGCACCGCAAGGAGAGCGAGGATGCGGTCAAAGCGCTGGCCAAGGAGAAGGACCTGCTGGAGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361144.9
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS TCA 72 bp AGGCCAATGTCATTCAGCCAGGCCTTGGCCACCCAGTaGTGGTCCAGCTCGGCAGCTTTGGACAGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: RPMSFSQALATQ*WSSSAALDRLR
Trigger: CCGCAGCCTGTCCAAAGCTGCCGAGCTGGACCATCACTGGGTGGCCAAGGCCTGGCTGAATGACATTGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 72 bp AGCTGCTCCTCGCGGCTCTCCAGTGTGGCATACAGCTaGTGCATCTGGCTCACCAGGTCTGTCTTCTCGCCC +
Preference number: 6 (lower is better)
Translates to: SCSSRLSSVAYS*CIWLTRSVFSP
Trigger: GGGCGAGAAGACAGACCTGGTGAGCCAGATGCAGCAGCTGTATGCCACACTGGAGAGCCGCGAGGAGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361144.9
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS GCA 72 bp TCACCTCCTGGCTGGCCGACTGGACCGCCCCATCGATaGGGAGCGCGAGCTGCTTATTGTCTTCCATCATGC +
Preference number: 6 (lower is better)
Translates to: SPPGWPTGPPHR*GARAAYCLPSC
Trigger: GCATGATGGAAGACAATAAGCAGCTCGCGCTCCGCATCGATGGGGCGGTCCAGTCGGCCAGCCAGGAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376030.7
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CAA 72 bp TCACGCTCCAGCAGGTCCTTCTCCTTGGCCAGCGCTTaGACCGCATCCTCGCTCTCCTTGCGGTGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: SRSSRSFSLASA*TASSLSLRCCS
Trigger: TGAGCAGCACCGCAAGGAGAGCGAGGATGCGGTCAAAGCGCTGGCCAAGGAGAAGGACCTGCTGGAGCGTGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361144.9
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CAA 90 bp TTGCCATTGAGCACCGTCTCGCCCGGCATGGCGAGGGAATGCCGCTaGGGGACGTCCTTGGTCAGCGTAGCTAAGGACTGTTTGGCCATG +
Preference number: 6 (lower is better)
Translates to: LPLSTVSPGMARECR*GTSLVSVAKDCLAM
Trigger: CATGGCCAAACAGTCCTTAGCTACGCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGGTGCTCAATGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CAA 90 bp TACTCCTTCAGGTCGATGTCTCGAACCCACTTGAGCACCCGCTGGTaGGTCCACACCACGGGGTCAATGTTCTGCGTCTCGCAGCGGGCC +
Preference number: 6 (lower is better)
Translates to: YSFRSMSRTHLSTRW*VHTTGSMFCVSQRA
Trigger: GGCCCGCTGCGAGACGCAGAACATTGACCCCGTGGTGTGGACCAACCAGCGGGTGCTCAAGTGGGTTCGAGACATCGACCTGAAGGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 72 bp GCAGCGTCCAGACCCTTGGAGTGTCAGAGCAAAGGATaGCGTCGCTGGCCCAGGAACTGCAGATCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: AASRPLECQSKG*RRWPRNCRSEA
Trigger: AGCCTCAGATCTGCAGTTCCTGGGCCAGCGACGGCATCCTTTGCTCTGACACTCCAAGGGTCTGGACGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS CCA 72 bp GCCACCCCGGTGCGGCGATGCAAAGGGGGCAGTTCCTaGGAGATATTCTGGATGCGGAGGGAAGTGCTAACT +
Preference number: 6 (lower is better)
Translates to: ATPVRRCKGGSS*EIFWMRREVLT
Trigger: AGTTAGCACTTCCCTCCGCATCCAGAATATCTCCCAGGAACTGCCCCCTTTGCATCGCCGCACCGGGGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS CAA 72 bp GGCTCCAGCACCAGCACAGCACCATGGACGCCGCTGTaGGTCAGGTTGTCTGCGTACTCCTTCAGGTCGATG +
Preference number: 6 (lower is better)
Translates to: GSSTSTAPWTPL*VRLSAYSFRSM
Trigger: CATCGACCTGAAGGAGTACGCAGACAACCTGACCAACAGCGGCGTCCATGGTGCTGTGCTGGTGCTGGAGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CAA 90 bp CTGGCCGACTGGACCGCCCCATCGATGCGGAGCGCGAGCTGCTTATaGTCTTCCATCATGCTCAGGATTTTGGCCTGTTGTGTCCTCCGC +
Preference number: 6 (lower is better)
Translates to: LADWTAPSMRSASCL*SSIMLRILACCVLR
Trigger: GCGGAGGACACAACAGGCCAAAATCCTGAGCATGATGGAAGACAATAAGCAGCTCGCGCTCCGCATCGATGGGGCGGTCCAGTCGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503743.5
CDS TCA 72 bp CTGCGTACTCCTTCAGGTCGATGTCTCGAACCCACTTaGGCACCCGCTGGTTGGTCCACACCACGGGGTCAA +
Preference number: 6 (lower is better)
Translates to: LRTPSGRCLEPT*APAGWSTPRGQ
Trigger: TTGACCCCGTGGTGTGGACCAACCAGCGGGTGCTCAAGTGGGTTCGAGACATCGACCTGAAGGAGTACGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 72 bp TGCTCCTCGCGGCTCTCCAGTGTGGCATACAGCTGCTaGATCTGGCTCACCAGGTCTGTCTTCTCGCCCTTT +
Preference number: 6 (lower is better)
Translates to: CSSRLSSVAYSC*IWLTRSVFSPF
Trigger: AAAGGGCGAGAAGACAGACCTGGTGAGCCAGATGCAGCAGCTGTATGCCACACTGGAGAGCCGCGAGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361144.9
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CCA 72 bp AGTACTGGGACAGGCCAATGTCATTCAGCCAGGCCTTaGCCACCCAGTGATGGTCCAGCTCGGCAGCTTTGG +
Preference number: 6 (lower is better)
Translates to: STGTGQCHSARP*PPSDGPARQLW
Trigger: CCAAAGCTGCCGAGCTGGACCATCACTGGGTGGCCAAGGCCTGGCTGAATGACATTGGCCTGTCCCAGTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CCA 72 bp GCTCCAGCACCAGCACAGCACCATGGACGCCGCTGTTaGTCAGGTTGTCTGCGTACTCCTTCAGGTCGATGT +
Preference number: 6 (lower is better)
Translates to: APAPAQHHGRRC*SGCLRTPSGRC
Trigger: ACATCGACCTGAAGGAGTACGCAGACAACCTGACCAACAGCGGCGTCCATGGTGCTGTGCTGGTGCTGGAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CCA 72 bp GCATTGAATGTGGGCTCCAGCACCAGCACAGCACCATaGACGCCGCTGTTGGTCAGGTTGTCTGCGTACTCC +
Preference number: 6 (lower is better)
Translates to: ALNVGSSTSTAP*TPLLVRLSAYS
Trigger: GGAGTACGCAGACAACCTGACCAACAGCGGCGTCCATGGTGCTGTGCTGGTGCTGGAGCCCACATTCAATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CAA 72 bp TGGACCGCCCCATCGATGCGGAGCGCGAGCTGCTTATaGTCTTCCATCATGCTCAGGATTTTGGCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: WTAPSMRSASCL*SSIMLRILAWG
Trigger: CCCCCAGGCCAAAATCCTGAGCATGATGGAAGACAATAAGCAGCTCGCGCTCCGCATCGATGGGGCGGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000491547.1
CDS CAA 72 bp AGCACCTTCCCGCTCTTCACGTTCTCCGTGCAGGCCTaGACGTACATAGGCATGGCCATCACCACCTCCAGC +
Preference number: 6 (lower is better)
Translates to: STFPLFTFSVQA*TYIGMAITTSS
Trigger: GCTGGAGGTGGTGATGGCCATGCCTATGTACGTCAAGGCCTGCACGGAGAACGTGAAGAGCGGGAAGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CAA 72 bp AGGTCGATGTCTCGAACCCACTTGAGCACCCGCTGGTaGGTCCACACCACGGGGTCAATGTTCTGCGTCTCG +
Preference number: 6 (lower is better)
Translates to: RSMSRTHLSTRW*VHTTGSMFCVS
Trigger: CGAGACGCAGAACATTGACCCCGTGGTGTGGACCAACCAGCGGGTGCTCAAGTGGGTTCGAGACATCGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CAA 72 bp TCTGCGTACTCCTTCAGGTCGATGTCTCGAACCCACTaGAGCACCCGCTGGTTGGTCCACACCACGGGGTCA +
Preference number: 6 (lower is better)
Translates to: SAYSFRSMSRTH*STRWLVHTTGS
Trigger: TGACCCCGTGGTGTGGACCAACCAGCGGGTGCTCAAGTGGGTTCGAGACATCGACCTGAAGGAGTACGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CAA 90 bp GTCAGGTTGTCTGCGTACTCCTTCAGGTCGATGTCTCGAACCCACTaGAGCACCCGCTGGTTGGTCCACACCACGGGGTCAATGTTCTGC +
Preference number: 6 (lower is better)
Translates to: VRLSAYSFRSMSRTH*STRWLVHTTGSMFC
Trigger: GCAGAACATTGACCCCGTGGTGTGGACCAACCAGCGGGTGCTCAAGTGGGTTCGAGACATCGACCTGAAGGAGTACGCAGACAACCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CAA 90 bp TTGAATGTGGGCTCCAGCACCAGCACAGCACCATGGACGCCGCTGTaGGTCAGGTTGTCTGCGTACTCCTTCAGGTCGATGTCTCGAACC +
Preference number: 6 (lower is better)
Translates to: LNVGSSTSTAPWTPL*VRLSAYSFRSMSRT
Trigger: GGTTCGAGACATCGACCTGAAGGAGTACGCAGACAACCTGACCAACAGCGGCGTCCATGGTGCTGTGCTGGTGCTGGAGCCCACATTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CAA 90 bp TCTTTTGGGGTCTTTGGTGTTGGTCATGTGGCAGCGTCCAGACCCTaGGAGTGTCAGAGCAAAGGATGCCGTCGCTGGCCCAGGAACTGC +
Preference number: 6 (lower is better)
Translates to: SFGVFGVGHVAASRP*ECQSKGCRRWPRNC
Trigger: GCAGTTCCTGGGCCAGCGACGGCATCCTTTGCTCTGACACTCCAAGGGTCTGGACGCTGCCACATGACCAACACCAAAGACCCCAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS TCA 72 bp TGGGTCTGGTGGAGCCACCAGTTCCTTACACGTTGGTaGCCTCCAGGCTGTTGTAGCCTTCCAGACGGCACT +
Preference number: 6 (lower is better)
Translates to: WVWWSHQFLTRW*PPGCCSLPDGT
Trigger: AGTGCCGTCTGGAAGGCTACAACAGCCTGGAGGTCACCAACGTGTAAGGAACTGGTGGCTCCACCAGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS GCA 72 bp CGATGCGGAGCGCGAGCTGCTTATTGTCTTCCATCATaGTCAGGATTTTGGCCTGGGGGCGAGAGAGGTGAC +
Preference number: 6 (lower is better)
Translates to: RCGARAAYCLPS*SGFWPGGERGD
Trigger: GTCACCTCTCTCGCCCCCAGGCCAAAATCCTGAGCATGATGGAAGACAATAAGCAGCTCGCGCTCCGCATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000491547.1
CDS GCA 72 bp CGATGCGGAGCGCGAGCTGCTTATTGTCTTCCATCATaGTCAGGATTTTGGCCTGTTGTGTCCTCCGCGGCC +
Preference number: 6 (lower is better)
Translates to: RCGARAAYCLPS*SGFWPVVSSAA
Trigger: GGCCGCGGAGGACACAACAGGCCAAAATCCTGAGCATGATGGAAGACAATAAGCAGCTCGCGCTCCGCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503743.5
CDS CCA 72 bp GCTTCCGATCAGCTTTCATGGCCTGCAAGGCTTCTTTaGCTCTGGCTAGCTCCTGCTCCTTCTGGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: ASDQLSWPARLL*LWLAPAPSGPA
Trigger: AGCTGGCCCAGAAGGAGCAGGAGCTAGCCAGAGCCAAAGAAGCCTTGCAGGCCATGAAAGCTGATCGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361144.9
ENST00000376028.8
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CCA 72 bp TTCAGGTCGATGTCTCGAACCCACTTGAGCACCCGCTaGTTGGTCCACACCACGGGGTCAATGTTCTGCGTC +
Preference number: 6 (lower is better)
Translates to: FRSMSRTHLSTR*LVHTTGSMFCV
Trigger: GACGCAGAACATTGACCCCGTGGTGTGGACCAACCAGCGGGTGCTCAAGTGGGTTCGAGACATCGACCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CCA 72 bp TCTTTGGTGTTGGTCATGTGGCAGCGTCCAGACCCTTaGAGTGTCAGAGCAAAGGATGCCGTCGCTGGCCCA +
Preference number: 6 (lower is better)
Translates to: SLVLVMWQRPDP*SVRAKDAVAGP
Trigger: TGGGCCAGCGACGGCATCCTTTGCTCTGACACTCCAAGGGTCTGGACGCTGCCACATGACCAACACCAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS CAA 72 bp ACCAGCACAGCACCATGGACGCCGCTGTTGGTCAGGTaGTCTGCGTACTCCTTCAGGTCGATGTCTCGAACC +
Preference number: 6 (lower is better)
Translates to: TSTAPWTPLLVR*SAYSFRSMSRT
Trigger: GGTTCGAGACATCGACCTGAAGGAGTACGCAGACAACCTGACCAACAGCGGCGTCCATGGTGCTGTGCTGGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CAA 72 bp GTCGCCAGCGTGGATTCCATGGCTCTTTTGGGGTCTTaGGTGTTGGTCATGTGGCAGCGTCCAGACCCTTGG +
Preference number: 6 (lower is better)
Translates to: VASVDSMALLGS*VLVMWQRPDPW
Trigger: CCAAGGGTCTGGACGCTGCCACATGACCAACACCAAAGACCCCAAAAGAGCCATGGAATCCACGCTGGCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS CAA 90 bp CCTGTGGCAGAATTGGATGTCGCCAGCGTGGATTCCATGGCTCTTTaGGGGTCTTTGGTGTTGGTCATGTGGCAGCGTCCAGACCCTTGG +
Preference number: 6 (lower is better)
Translates to: PVAELDVASVDSMAL*GSLVLVMWQRPDPW
Trigger: CCAAGGGTCTGGACGCTGCCACATGACCAACACCAAAGACCCCAAAAGAGCCATGGAATCCACGCTGGCGACATCCAATTCTGCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS GCA 72 bp GGCTGTTGTAGCCTTCCAGACGGCACTGTTCCAGCCTaGTCTGGGGGTCATCGTCTCCGCAATCTTCGTTTT +
Preference number: 6 (lower is better)
Translates to: GCCSLPDGTVPA*SGGHRLRNLRF
Trigger: AAAACGAAGATTGCGGAGACGATGACCCCCAGAGCAGGCTGGAACAGTGCCGTCTGGAAGGCTACAACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CCA 72 bp TACAGCAGCTCGATCCCCAGCAGGATGCTGACCTGGTaGAACTTCTTGGACACGTTCAGGTGCTTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: YSSSIPSRMLTW*NFLDTFRCFSR
Trigger: CCTGGAGAAGCACCTGAACGTGTCCAAGAAGTTCCACCAGGTCAGCATCCTGCTGGGGATCGAGCTGCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CCA 72 bp TGGTACAGCAGCTCGATCCCCAGCAGGATGCTGACCTaGTGGAACTTCTTGGACACGTTCAGGTGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: WYSSSIPSRMLT*WNFLDTFRCFS
Trigger: GGAGAAGCACCTGAACGTGTCCAAGAAGTTCCACCAGGTCAGCATCCTGCTGGGGATCGAGCTGCTGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CCA 72 bp AGAACAGGAAATGCATTCGCCAGAGTGCTCCCTGGGTaGACGAGAGGAAACAGCGAGTATGGCTTCACCCCG +
Preference number: 6 (lower is better)
Translates to: RTGNAFARVLPG*TRGNSEYGFTP
Trigger: CGGGGTGAAGCCATACTCGCTGTTTCCTCTCGTCCACCCAGGGAGCACTCTGGCGAATGCATTTCCTGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 72 bp AGACCCTTGGAGTGTCAGAGCAAAGGATGCCGTCGCTaGCCCAGGAACTGCAGATCTGAGGCTACTTGTCAC +
Preference number: 6 (lower is better)
Translates to: RPLECQSKGCRR*PRNCRSEATCH
Trigger: GTGACAAGTAGCCTCAGATCTGCAGTTCCTGGGCCAGCGACGGCATCCTTTGCTCTGACACTCCAAGGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS CAA 72 bp TCGATCCCCAGCAGGATGCTGACCTGGTGGAACTTCTaGGACACGTTCAGGTGCTTCTCCAGGTCTCGCTTC +
Preference number: 6 (lower is better)
Translates to: SIPSRMLTWWNF*DTFRCFSRSRF
Trigger: GAAGCGAGACCTGGAGAAGCACCTGAACGTGTCCAAGAAGTTCCACCAGGTCAGCATCCTGCTGGGGATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CAA 72 bp AAGACGTGGGAGAAGGTGACGGGGCCTGTGGCAGAATaGGATGTCGCCAGCGTGGATTCCATGGCTCTTTTG +
Preference number: 6 (lower is better)
Translates to: KTWEKVTGPVAE*DVASVDSMALL
Trigger: CAAAAGAGCCATGGAATCCACGCTGGCGACATCCAATTCTGCCACAGGCCCCGTCACCTTCTCCCACGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS CAA 90 bp TACAGCAGCTCGATCCCCAGCAGGATGCTGACCTGGTGGAACTTCTaGGACACGTTCAGGTGCTTCTCCAGGTCTCGCTTCATCAGGGAA +
Preference number: 6 (lower is better)
Translates to: YSSSIPSRMLTWWNF*DTFRCFSRSRFIRE
Trigger: TTCCCTGATGAAGCGAGACCTGGAGAAGCACCTGAACGTGTCCAAGAAGTTCCACCAGGTCAGCATCCTGCTGGGGATCGAGCTGCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS TCA 72 bp TCTAGTGACTGTACAATAGGGTTGTGCAGGTTCTTCTaGACTGGGCCGGGACTGTCGCCGTTGCAGAGGGAG +
Preference number: 6 (lower is better)
Translates to: SSDCTIGLCRFF*TGPGLSPLQRE
Trigger: CTCCCTCTGCAACGGCGACAGTCCCGGCCCAGTTCAGAAGAACCTGCACAACCCTATTGTACAGTCACTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000503743.5
ENST00000636203.1
CDS TCA 72 bp AGGGAATTCAGCATCCGCCCATCAACCAGGTGGTTCTaGAAGGCCTGGGAGTACTGGGACAGGCCAATGTCA +
Preference number: 6 (lower is better)
Translates to: REFSIRPSTRWF*KAWEYWDRPMS
Trigger: TGACATTGGCCTGTCCCAGTACTCCCAGGCCTTTCAGAACCACCTGGTTGATGGGCGGATGCTGAATTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS TCA 72 bp TCACTTGGTACAGCAGCTCGATCCCCAGCAGGATGCTaGCCTGGTGGAACTTCTTGGACACGTTCAGGTGCT +
Preference number: 6 (lower is better)
Translates to: SLGTAARSPAGC*PGGTSWTRSGA
Trigger: AGCACCTGAACGTGTCCAAGAAGTTCCACCAGGTCAGCATCCTGCTGGGGATCGAGCTGCTGTACCAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS TCA 72 bp ATAGTATTCATCTCCCAGGGCTGCTGTGCCAATGCCTaGGGACAGATAAAAAGCCCCAGCAAGCGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: IVFISQGCCANA*GQIKSPSKRPG
Trigger: GCCAGGCCGCTTGCTGGGGCTTTTTATCTGTCCTCAGGCATTGGCACAGCAGCCCTGGGAGATGAATACTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400797.3
CDS TCA 72 bp TCTAGTGACTGTACAATAGGGTTGTGCAGGTTCTTCTaGACTGGGCCGGGACTGTCGCCCTGTAGCCAGAGG +
Preference number: 6 (lower is better)
Translates to: SSDCTIGLCRFF*TGPGLSPCSQR
Trigger: CCTCTGGCTACAGGGCGACAGTCCCGGCCCAGTTCAGAAGAACCTGCACAACCCTATTGTACAGTCACTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS TCA 72 bp CAAAGGATGCCGTCGCTGGCCCAGGAACTGCAGATCTaGGGCTACTTGTCACTTCCAAGAAAATGTCCCCGC +
Preference number: 6 (lower is better)
Translates to: QRMPSLAQELQI*GYLSLPRKCPR
Trigger: GCGGGGACATTTTCTTGGAAGTGACAAGTAGCCTCAGATCTGCAGTTCCTGGGCCAGCGACGGCATCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS CCA 72 bp GAGAGGCAGCAGACAGTCCACTACCGTGGAGCTAATTaGATGCAGAGCTACAGCTCCAATTGGGGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: ERQQTVHYRGAN*MQSYSSNWGLS
Trigger: TGACAGCCCCCAATTGGAGCTGTAGCTCTGCATCCAATTAGCTCCACGGTAGTGGACTGTCTGCTGCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CAA 72 bp TGGACCGCCCCATCGATGCGGAGCGCGAGCTGCTTATaGTCTTCCATCATGCTCAGGATTTTGGCCTGTTGT +
Preference number: 6 (lower is better)
Translates to: WTAPSMRSASCL*SSIMLRILACC
Trigger: ACAACAGGCCAAAATCCTGAGCATGATGGAAGACAATAAGCAGCTCGCGCTCCGCATCGATGGGGCGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503743.5
CDS CAA 90 bp GTGGTTCTGGAACTGGATGGCCTGGTTCAAATCCTGGCTCTGTCCTaGGGTAGTTGTTTGACCCTGGCACGTCACTTCCCTGTCCTTGTG +
Preference number: 6 (lower is better)
Translates to: VVLELDGLVQILALS*GSCLTLARHFPVLV
Trigger: CACAAGGACAGGGAAGTGACGTGCCAGGGTCAAACAACTACCCAAGGACAGAGCCAGGATTTGAACCAGGCCATCCAGTTCCAGAACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400797.3
CDS CAA 90 bp GAATTGGATGTCGCCAGCGTGGATTCCATGGCTCTTTTGGGGTCTTaGGTGTTGGTCATGTGGCAGCGTCCAGACCCTTGGAGTGTCAGA +
Preference number: 6 (lower is better)
Translates to: ELDVASVDSMALLGS*VLVMWQRPDPWSVR
Trigger: TCTGACACTCCAAGGGTCTGGACGCTGCCACATGACCAACACCAAAGACCCCAAAAGAGCCATGGAATCCACGCTGGCGACATCCAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS GCA 72 bp GGCAGCAGACAGTCCACTACCGTGGAGCTAATTGGATaGAGAGCTACAGCTCCAATTGGGGGCTGTCAGATT +
Preference number: 6 (lower is better)
Translates to: GSRQSTTVELIG*RATAPIGGCQI
Trigger: AATCTGACAGCCCCCAATTGGAGCTGTAGCTCTGCATCCAATTAGCTCCACGGTAGTGGACTGTCTGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 72 bp ACTTCCGCTGCTTCCCTCTGGCGAAGACGCGGGAGATaGAGCCGAATCCCATCTTCTCTTTCTTCTTTTTCC +
Preference number: 6 (lower is better)
Translates to: TSAASLWRRRGR*SRIPSSLSSFS
Trigger: GGAAAAAGAAGAAAGAGAAGATGGGATTCGGCTCCATCTCCCGCGTCTTCGCCAGAGGGAAGCAGCGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361144.9
ENST00000376030.7
ENST00000400797.3
ENST00000400798.6
ENST00000491547.1
ENST00000503743.5
ENST00000636203.1
CDS CCA 72 bp GGCCACAATGACAGTGAAGAGCAGTGGTTCTGGAACTaGATGGCCTGGTTCAAATCCTGGCTCTGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: GHNDSEEQWFWN*MAWFKSWLCPW
Trigger: CCAAGGACAGAGCCAGGATTTGAACCAGGCCATCCAGTTCCAGAACCACTGCTCTTCACTGTCATTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400797.3
CDS CCA 72 bp GCAGGGACACTGCTGGCTGTAGGTATAACTCCACAGTaGTCCTTCAGGATCAGGGAATGGATGTCAGAGACC +
Preference number: 6 (lower is better)
Translates to: AGTLLAVGITPQ*SFRIREWMSET
Trigger: GGTCTCTGACATCCATTCCCTGATCCTGAAGGACCACTGTGGAGTTATACCTACAGCCAGCAGTGTCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 72 bp GGGGCCTGCTCACTGAAACGCCTGTATGCAGACAACTaGCTTATCAAAGCACCCATTTCCTGGCAGCAGGAA +
Preference number: 6 (lower is better)
Translates to: GACSLKRLYADN*LIKAPISWQQE
Trigger: TTCCTGCTGCCAGGAAATGGGTGCTTTGATAAGCCAGTTGTCTGCATACAGGCGTTTCAGTGAGCAGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 72 bp TCCATGGCTCTTTTGGGGTCTTTGGTGTTGGTCATGTaGCAGCGTCCAGACCCTTGGAGTGTCAGAGCAAAG +
Preference number: 6 (lower is better)
Translates to: SMALLGSLVLVM*QRPDPWSVRAK
Trigger: CTTTGCTCTGACACTCCAAGGGTCTGGACGCTGCCACATGACCAACACCAAAGACCCCAAAAGAGCCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS CCA 72 bp CTGTGGCAGAATTGGATGTCGCCAGCGTGGATTCCATaGCTCTTTTGGGGTCTTTGGTGTTGGTCATGTGGC +
Preference number: 6 (lower is better)
Translates to: LWQNWMSPAWIP*LFWGLWCWSCG
Trigger: GCCACATGACCAACACCAAAGACCCCAAAAGAGCCATGGAATCCACGCTGGCGACATCCAATTCTGCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS CAA 72 bp GAACTGGATGGCCTGGTTCAAATCCTGGCTCTGTCCTaGGGTAGTTGTTTGACCCTGGCACGTCACTTCCCT +
Preference number: 6 (lower is better)
Translates to: ELDGLVQILALS*GSCLTLARHFP
Trigger: AGGGAAGTGACGTGCCAGGGTCAAACAACTACCCAAGGACAGAGCCAGGATTTGAACCAGGCCATCCAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400797.3
CDS CAA 72 bp AGCTTCCCCCACAACCGACACAATGAATCTCTTAGTTaGCGCAGGGGCAGGCAGGACTCGTTAGCCCTATTC +
Preference number: 6 (lower is better)
Translates to: SFPHNRHNESLS*RRGRQDSLALF
Trigger: GAATAGGGCTAACGAGTCCTGCCTGCCCCTGCGCAAACTAAGAGATTCATTGTGTCGGTTGTGGGGGAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS GCA 72 bp ATGCTGACCTGGTGGAACTTCTTGGACACGTTCAGGTaGTTCTCCAGGTCTCGCTTCATCAGGGAATTCAGC +
Preference number: 6 (lower is better)
Translates to: MLTWWNFLDTFR*FSRSRFIREFS
Trigger: GCTGAATTCCCTGATGAAGCGAGACCTGGAGAAGCACCTGAACGTGTCCAAGAAGTTCCACCAGGTCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CAA 90 bp GCAGCACATGACGGGCTAATGCCATCTGATGAGGGCTCTGGGGAATaGCCACAATTGATATCCTCTAACTGGCCTCTCTTGAAGGCATCC +
Preference number: 6 (lower is better)
Translates to: AAHDGLMPSDEGSGE*PQLISSNWPLLKAS
Trigger: GGATGCCTTCAAGAGAGGCCAGTTAGAGGATATCAATTGTGGCAATTCCCCAGAGCCCTCATCAGATGGCATTAGCCCGTCATGTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376028.8
ENST00000400798.6
CDS CAA 90 bp ACTGTCCTCAGAAGCTCAACCCACCTTCAATTTACTCCCACACTGTaGCAGAGCCCATCTGTCTGCCCCACTAGTCATCAAGAGCTAGGC +
Preference number: 6 (lower is better)
Translates to: TVLRSSTHLQFTPTL*QSPSVCPTSHQELG
Trigger: GCCTAGCTCTTGATGACTAGTGGGGCAGACAGATGGGCTCTGCAACAGTGTGGGAGTAAATTGAAGGTGGGTTGAGCTTCTGAGGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CAA 90 bp GTAGCCTCTAGCTTCCCCCACAACCGACACAATGAATCTCTTAGTTaGCGCAGGGGCAGGCAGGACTCGTTAGCCCTATTCACAGATATC +
Preference number: 6 (lower is better)
Translates to: VASSFPHNRHNESLS*RRGRQDSLALFTDI
Trigger: GATATCTGTGAATAGGGCTAACGAGTCCTGCCTGCCCCTGCGCAAACTAAGAGATTCATTGTGTCGGTTGTGGGGGAAGCTAGAGGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CAA 90 bp CTGTTCCAGCCTGCTCTGGGGGTCATCGTCTCCGCAATCTTCGTTTaGAAGAGAGCCATAGTCATCATGGAAATCGGGATCTTTGCTGCT +
Preference number: 6 (lower is better)
Translates to: LFQPALGVIVSAIFV*KRAIVIMEIGIFAA
Trigger: AGCAGCAAAGATCCCGATTTCCATGATGACTATGGCTCTCTTCAAAACGAAGATTGCGGAGACGATGACCCCCAGAGCAGGCTGGAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS TCA 72 bp TCCAGGGCGTCTAAGTTCCTGTCCCAGTCTGTCCTCTaGGTTAGAGCTAGAGCTTGGTTAGACTTGGTGCTT +
Preference number: 6 (lower is better)
Translates to: SRASKFLSQSVL*VRARAWLDLVL
Trigger: AAGCACCAAGTCTAACCAAGCTCTAGCTCTAACTCAGAGGACAGACTGGGACAGGAACTTAGACGCCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS GCA 72 bp GAAGCTCAACCCACCTTCAATTTACTCCCACACTGTTaGAGAGCCCATCTGTCTGCCCCACTAGTCATCAAG +
Preference number: 6 (lower is better)
Translates to: EAQPTFNLLPHC*RAHLSAPLVIK
Trigger: CTTGATGACTAGTGGGGCAGACAGATGGGCTCTGCAACAGTGTGGGAGTAAATTGAAGGTGGGTTGAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS GCA 72 bp GTCCAGGCTGCACTATTCTTGCTGGTGGACGTCAGATaGCCAAGGCAAAGGGTTACCTGTAGCTATTTTTGG +
Preference number: 6 (lower is better)
Translates to: VQAALFLLVDVR*PRQRVTCSYFW
Trigger: CCAAAAATAGCTACAGGTAACCCTTTGCCTTGGGCATCTGACGTCCACCAGCAAGAATAGTGCAGCCTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS GCA 72 bp TGTCAGAGCAAAGGATGCCGTCGCTGGCCCAGGAACTaGAGATCTGAGGCTACTTGTCACTTCCAAGAAAAT +
Preference number: 6 (lower is better)
Translates to: CQSKGCRRWPRN*RSEATCHFQEN
Trigger: ATTTTCTTGGAAGTGACAAGTAGCCTCAGATCTGCAGTTCCTGGGCCAGCGACGGCATCCTTTGCTCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS GCA 72 bp CGATGCGGAGCGCGAGCTGCTTATTGTCTTCCATCATaGTCAGGATTTTGGCCTGAGCATCCATTAAGAGGT +
Preference number: 6 (lower is better)
Translates to: RCGARAAYCLPS*SGFWPEHPLRG
Trigger: ACCTCTTAATGGATGCTCAGGCCAAAATCCTGAGCATGATGGAAGACAATAAGCAGCTCGCGCTCCGCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS CCA 72 bp AAAGAAAAATCTAAGTTTCCCCCTAACCAGGAGTCGTaGCTTCTTGACCCGGAAGGGTGGCTGGAACTTGCC +
Preference number: 6 (lower is better)
Translates to: KEKSKFPPNQES*LLDPEGWLELA
Trigger: GGCAAGTTCCAGCCACCCTTCCGGGTCAAGAAGCCACGACTCCTGGTTAGGGGGAAACTTAGATTTTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS CAA 72 bp GACGGGCTAATGCCATCTGATGAGGGCTCTGGGGAATaGCCACAATTGATATCCTCTAACTGGCCTCTCTTG +
Preference number: 6 (lower is better)
Translates to: DGLMPSDEGSGE*PQLISSNWPLL
Trigger: CAAGAGAGGCCAGTTAGAGGATATCAATTGTGGCAATTCCCCAGAGCCCTCATCAGATGGCATTAGCCCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376028.8
ENST00000400798.6
CDS CAA 72 bp CCTGCTCTGGGGGTCATCGTCTCCGCAATCTTCGTTTaGAAGAGAGCCATAGTCATCATGGAAATCGGGATC +
Preference number: 6 (lower is better)
Translates to: PALGVIVSAIFV*KRAIVIMEIGI
Trigger: GATCCCGATTTCCATGATGACTATGGCTCTCTTCAAAACGAAGATTGCGGAGACGATGACCCCCAGAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376030.7
ENST00000636203.1
CDS CAA 90 bp GACGGGCTAATGCCATCTGATGAGGGCTCTGGGGAATTGCCACAATaGATATCCTCTAACTGGCCTCTCTTGAAGGCATCCAAAAAGCAG +
Preference number: 6 (lower is better)
Translates to: DGLMPSDEGSGELPQ*ISSNWPLLKASKKQ
Trigger: CTGCTTTTTGGATGCCTTCAAGAGAGGCCAGTTAGAGGATATCAATTGTGGCAATTCCCCAGAGCCCTCATCAGATGGCATTAGCCCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376028.8
ENST00000400798.6
CDS CAA 90 bp GGGAATGGATGTCAGAGACCCCTCCAGTGGCCCACCTTCCTTGCCTaGGTTCTGTTAGTCAAGATAGACTTTGTCACTAGGATTCTCTTC +
Preference number: 6 (lower is better)
Translates to: GNGCQRPLQWPTFLA*VLLVKIDFVTRILF
Trigger: GAAGAGAATCCTAGTGACAAAGTCTATCTTGACTAACAGAACCAAGGCAAGGAAGGTGGGCCACTGGAGGGGTCTCTGACATCCATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS GCA 72 bp GCTAGGCAGCTAGGGCCTTTGCCTCCTGGGAGCTGGTaGCCAGTATGCAATCAAAAAGTGTTTGATGAAATA +
Preference number: 6 (lower is better)
Translates to: ARQLGPLPPGSW*PVCNQKVFDEI
Trigger: TATTTCATCAAACACTTTTTGATTGCATACTGGGCACCAGCTCCCAGGAGGCAAAGGCCCTAGCTGCCTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 72 bp ACCCAGACCCCAATATTTCATGTTAGAGCCTCGACATaGCTTCCAACTGTCCTCAGAAGCTCAACCCACCTT +
Preference number: 6 (lower is better)
Translates to: TQTPIFHVRAST*LPTVLRSSTHL
Trigger: AAGGTGGGTTGAGCTTCTGAGGACAGTTGGAAGCCATGTCGAGGCTCTAACATGAAATATTGGGGTCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 72 bp AGATGCCCAAGGCAAAGGGTTACCTGTAGCTATTTTTaGGCTCTTCCTGGCTTACCTGCATGCACACCTGTT +
Preference number: 6 (lower is better)
Translates to: RCPRQRVTCSYF*ALPGLPACTPV
Trigger: AACAGGTGTGCATGCAGGTAAGCCAGGAAGAGCCCAAAAATAGCTACAGGTAACCCTTTGCCTTGGGCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 72 bp GAATCAGTCTGCCCTGTCTGGAGCCCACAGATCCTTTaGATCAAAACAGTCATTACTAGGGAGACTCCTGGT +
Preference number: 6 (lower is better)
Translates to: ESVCPVWSPQIL*IKTVITRETPG
Trigger: ACCAGGAGTCTCCCTAGTAATGACTGTTTTGATCCAAAGGATCTGTGGGCTCCAGACAGGGCAGACTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 72 bp TTTCCATTGTGTTGCCAGCCCTGCCTTACGTGGGTGTaGAGGGAACCCTTAATAGCCTACAGGTGTACAAAA +
Preference number: 6 (lower is better)
Translates to: FPLCCQPCLTWV*REPLIAYRCTK
Trigger: TTTTGTACACCTGTAGGCTATTAAGGGTTCCCTCCACACCCACGTAAGGCAGGGCTGGCAACACAATGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS GCA 72 bp GTGTACAAAAGCCTTCACTACATCCCAGAATCAGTCTaGCCTGTCTGGAGCCCACAGATCCTTTGGATCAAA +
Preference number: 6 (lower is better)
Translates to: VYKSLHYIPESV*PVWSPQILWIK
Trigger: TTTGATCCAAAGGATCTGTGGGCTCCAGACAGGGCAGACTGATTCTGGGATGTAGTGAAGGCTTTTGTACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 72 bp GGCTCTGGGGAATTGCCACAATTGATATCCTCTAACTaGCCTCTCTTGAAGGCATCCAAAAAGCAGACGAGA +
Preference number: 6 (lower is better)
Translates to: GSGELPQLISSN*PLLKASKKQTR
Trigger: TCTCGTCTGCTTTTTGGATGCCTTCAAGAGAGGCCAGTTAGAGGATATCAATTGTGGCAATTCCCCAGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376028.8
ENST00000400798.6
CDS CCA 72 bp AGCCTTCACTACATCCCAGAATCAGTCTGCCCTGTCTaGAGCCCACAGATCCTTTGGATCAAAACAGTCATT +
Preference number: 6 (lower is better)
Translates to: SLHYIPESVCPV*SPQILWIKTVI
Trigger: AATGACTGTTTTGATCCAAAGGATCTGTGGGCTCCAGACAGGGCAGACTGATTCTGGGATGTAGTGAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS GCA 72 bp ATCTTTGCCAAATCTATGGGTAAAGAGAATGGGGCCTaGTCACTGAAACGCCTGTATGCAGACAACTGGCTT +
Preference number: 6 (lower is better)
Translates to: IFAKSMGKENGA*SLKRLYADNWL
Trigger: AAGCCAGTTGTCTGCATACAGGCGTTTCAGTGAGCAGGCCCCATTCTCTTTACCCATAGATTTGGCAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 72 bp TGTTTGACCCTGGCACGTCACTTCCCTGTCCTTGTGTaGAGAATGAAGATCACAATAGTATTCATCTCCCAG +
Preference number: 6 (lower is better)
Translates to: CLTLARHFPVLV*RMKITIVFISQ
Trigger: CTGGGAGATGAATACTATTGTGATCTTCATTCTCCACACAAGGACAGGGAAGTGACGTGCCAGGGTCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400797.3
CDS CCA 72 bp AGTGCCTTCGACTTGGTGACAATAAAATGGGAAATCTaGTCATTGAGGGTGTGCAATGATTGCACAGCTGCT +
Preference number: 6 (lower is better)
Translates to: SAFDLVTIKWEI*SLRVCNDCTAA
Trigger: AGCAGCTGTGCAATCATTGCACACCCTCAATGACCAGATTTCCCATTTTATTGTCACCAAGTCGAAGGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS CCA 72 bp CCTGAGCATCCATTAAGAGGTGCCTCATCAATATCATaGAACTCTTCAGAGTCTCCTTCTCAGTGGGTAGAA +
Preference number: 6 (lower is better)
Translates to: PEHPLRGASSIS*NSSESPSQWVE
Trigger: TTCTACCCACTGAGAAGGAGACTCTGAAGAGTTCCATGATATTGATGAGGCACCTCTTAATGGATGCTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636203.1
CDS CAA 72 bp GAATTGCCACAATTGATATCCTCTAACTGGCCTCTCTaGAAGGCATCCAAAAAGCAGACGAGAGAAAGCCTG +
Preference number: 6 (lower is better)
Translates to: ELPQLISSNWPL*KASKKQTRESL
Trigger: CAGGCTTTCTCTCGTCTGCTTTTTGGATGCCTTCAAGAGAGGCCAGTTAGAGGATATCAATTGTGGCAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376028.8
ENST00000400798.6
CDS CAA 72 bp GCAGCTAAGATAGTTCCACTCTGGATAGGAACATCTTaGCCAAATCTATGGGTAAAGAGAATGGGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: AAKIVPLWIGTS*PNLWVKRMGPA
Trigger: AGCAGGCCCCATTCTCTTTACCCATAGATTTGGCAAAGATGTTCCTATCCAGAGTGGAACTATCTTAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CAA 72 bp AGAAAAGGGTCTTTGTCCTCCTCCAGTGCCTTCGACTaGGTGACAATAAAATGGGAAATCTGGTCATTGAGG +
Preference number: 6 (lower is better)
Translates to: RKGSLSSSSAFD*VTIKWEIWSLR
Trigger: CCTCAATGACCAGATTTCCCATTTTATTGTCACCAAGTCGAAGGCACTGGAGGAGGACAAAGACCCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636203.1
ENST00000636564.1
CDS CCA 72 bp TCTGAGCATCCATTAAGAGGTGCCTCATCAATATCATaGAACTCTTCAGAGTCTCCTTCTCAGTGGGTAGAA +
Preference number: 6 (lower is better)
Translates to: SEHPLRGASSIS*NSSESPSQWVE
Trigger: TTCTACCCACTGAGAAGGAGACTCTGAAGAGTTCCATGATATTGATGAGGCACCTCTTAATGGATGCTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636564.1
CDS CCA 72 bp ATTCTCTTGAGTTCTCCAGGTAGAGAATCATGTCACTaGCAAGTAATGGTTTTGTCCAATGTGTTCACCTCA +
Preference number: 6 (lower is better)
Translates to: ILLSSPGRESCH*QVMVLSNVFTS
Trigger: TGAGGTGAACACATTGGACAAAACCATTACTTGCCAGTGACATGATTCTCTACCTGGAGAACTCAAGAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CCA 72 bp GAATCCATTCTGAAGGCAGCTAAGATAGTTCCACTCTaGATAGGAACATCTTTGCCAAATCTATGGGTAAAG +
Preference number: 6 (lower is better)
Translates to: ESILKAAKIVPL*IGTSLPNLWVK
Trigger: CTTTACCCATAGATTTGGCAAAGATGTTCCTATCCAGAGTGGAACTATCTTAGCTGCCTTCAGAATGGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491547.1
CDS CAA 90 bp TTCAGAAGCCTGCTGGATCATTGGAAATGCATTGAAATGAATTCATaGTCCATGTGTTTATGGATGACTTCTGAGCATCCATTAAGAGGT +
Preference number: 6 (lower is better)
Translates to: FRSLLDHWKCIEMNS*SMCLWMTSEHPLRG
Trigger: ACCTCTTAATGGATGCTCAGAAGTCATCCATAAACACATGGACAATGAATTCATTTCAATGCATTTCCAATGATCCAGCAGGCTTCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636564.1