Pregenerated sensors for JSRP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000167476Ensembl transcript IDs: ENST00000300961.10, ENST00000593238.2
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCTGGCTCCCTCGGGGCTaGGCTTGGCGGGACCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GRSTRFISPESRGVQKGPWLPRG*AWRDPG Trigger: CCCTGGGTCCCGCCAAGCTCAGCCCCGAGGGAGCCA...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCCTTCCCGGGGCTCCCTaGCGGCCCGTGGCCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPLPGAP*RPVASP Trigger: AGGAGAGGCCACGGGCCGCCAGGGAGCCCCGGGAAG...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCGTGCCCACGGCCGGTaGCCCCCTTCGCGTGACTCC | + |
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Preference number: 4 (lower is better) Translates to: GRSTRFISPESRGVQKGPRAHGR*PPSRDS Trigger: GGAGTCACGCGAAGGGGGCCACCGGCCGTGGGCACG...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCTGGGCTCGGCGTCCCTaGAGTCCCGTGCCCACGGCC | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPWARRP*SPVPTA Trigger: GGCCGTGGGCACGGGACTCCAGGGACGCCGAGCCCA...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR GCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCAGTCGTGGGGCACGCTaGCGGAGTCGGCCAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPSRGAR*RSRPAW Trigger: CCAGGCTGGCCGACTCCGGCAGCGTGCCCCACGACT...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR GCA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCGGTCTGCGCCTTCTTaGGCGCGGGGACGCTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: GRSTRFISPESRGVQKGPRSAPS*ARGRSE Trigger: CTCGGAGCGTCCCCGCGCGCAAGAAGGCGCAGACCG...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR GCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCCTTGGGTCTGACCTCTaGCTCGGCCCGGGGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPLGSDL*LGPGRR Trigger: CCTGCGCCCCGGGCCGAGGCAGAGGTCAGACCCAAG...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR GCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCCGACTCCCAGGCCGCTaGTCCTCGTCGGGACGCCTC | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPRLPGR*SSSGRL Trigger: GAGGCGTCCCGACGAGGAGCAGCGGCCTGGGAGTCG...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCCTCCTTCCCCGTTCCTaGGGTCCCCCTGGCGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPLLPRS*GPPGGR Trigger: CCTGCCGCCAGGGGGACCCCAGGAACGGGGAAGGAG...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCGGACGGCCTCTCCGGTaGCCTCGCCGGGCTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPGRPLR*PRRAPL Trigger: AAGAGGAGCCCGGCGAGGCCACCGGAGAGGCCGTCC...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCCTCCCTGGCGGCCCGTaGCCTCTCCTCTTTCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPLPGGP*PLLFPR Trigger: CCGCGGAAAGAGGAGAGGCCACGGGCCGCCAGGGAG...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCGTGACTCCCAGCGCTaGGGTAGGGCTTCCCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GRSTRFISPESRGVQKGPRDSQR*GRASRG Trigger: GCCCCGGGAAGCCCTACCCCAGCGCTGGGAGTCACG...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCCTGCGCGGAGCTTCTaGCGACTCCCAGGCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GRSTRFISPESRGVQKGPPARSF*RLPGRC Trigger: GCAGCGGCCTGGGAGTCGCCAGAAGCTCCGCGCAGG...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR TCA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCGGGCCTTCAGCCACCTaGGAGTCGTGGGGCACGCTG | + |
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Preference number: 4 (lower is better) Translates to: GRSTRFISPESRGVQKGPGPSAT*ESWGTL Trigger: CAGCGTGCCCCACGACTCTCAGGTGGCTGAAGGCCC...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR GCA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCGGGCTCGGGCACACGTaGTTGGAGTGCTGCCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: GRSTRFISPESRGVQKGPGLGHT*LECCLP Trigger: GGGGAGGCAGCACTCCAAGCACGTGTGCCCGAGCCC...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR GCA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCGGGGACACCCAGGCCTaGTTCTTCCTGGGCTCGGCG | + |
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Preference number: 4 (lower is better) Translates to: GRSTRFISPESRGVQKGPGDTQA*FFLGSA Trigger: CGCCGAGCCCAGGAAGAAGCAGGCCTGGGTGTCCCC...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR GCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCGTCCCGCCCCTTGCCTaGGCGGAGCTTCTGGCGACT | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPVPPLA*AELLAT Trigger: AGTCGCCAGAAGCTCCGCGCAGGCAAGGGGCGGGAC...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR GCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCCTCAGTCCCGCCCCTTaGCTGCGCGGAGCTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPLSPAP*LRGASG Trigger: GCCAGAAGCTCCGCGCAGGCAAGGGGCGGGACTGAG...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCTCGGCCAGCGCAGAGTaGTCCTCCAGGGCCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GRSTRFISPESRGVQKGPSASAE*SSRAWQ Trigger: CTGCCAGGCCCTGGAGGACCACTCTGCGCTGGCCGA...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCGCGTCGCGGCACAGCTaGAAAGCCGAGCCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GRSTRFISPESRGVQKGPASRHS*KAEPSS Trigger: GCTGCTGGGCTCGGCTTTCCAGCTGTGCCGCGACGC...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCTCCGAGGCCTCTCCTTaGGTCCCCGGTCTGCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: GRSTRFISPESRGVQKGPSEASP*VPGLRG Trigger: CCCTCGCAGACCGGGGACCCAAGGAGAGGCCTCGGA...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR TCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCCAGCCTGGGTGTCGCTaGAGCCCTGTCCTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPQPGCR*SPVLLG Trigger: ACCCAGGAGGACAGGGCTTCAGCGACACCCAGGCTG...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR GCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCACGTGCTTGGAGTGCTaGCTCCCCAGGGACGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPTCLEC*LPRDGV Trigger: GACGCCGTCCCTGGGGAGGCAGCACTCCAAGCACGT...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR GCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCCACACGTGCTTGGAGTaGTGCCTCCCCAGGGACGGC | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPHTCLE*CLPRDG Trigger: GCCGTCCCTGGGGAGGCAGCACTCCAAGCACGTGTG...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR GCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCCTTGGGTCCCCGGTCTaGGAGGGTCACACGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPLGSPV*EGHTVL Trigger: GAGGACCGTGTGACCCTCGCAGACCGGGGACCCAAG...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCGAAGCCCTGTCCTCCTaGGTCTCGGCCAGCGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPEALSS*VSASAE Trigger: CTCTGCGCTGGCCGAGACCCAGGAGGACAGGGCTTC...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCGGAGTCGGCCAGCCTaGGTGTCGCTGAAGCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: GRSTRFISPESRGVQKGPRSRPA*VSLKPC Trigger: ACAGGGCTTCAGCGACACCCAGGCTGGCCGACTCCG...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCTCGGGCACACGTGCTTaGAGTGCTGCCTCCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPSGTRA*SAASPG Trigger: CCCTGGGGAGGCAGCACTCCAAGCACGTGTGCCCGA...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR TCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCGCACCAGGCACTTGTTaGGCGACAGGTCTCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPAPGTC*ATGLPR Trigger: CCTGGGGAGACCTGTCGCTCAACAAGTGCCTGGTGC...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR GCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCCTCTTCGTCGTTCTCTaGAGCCTCCCGACTCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPLFVVL*SLPTPG Trigger: CCCGGGAGTCGGGAGGCTGCAGAGAACGACGAAGAG...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCGCTGATGGAGGCGCCTaGGCCTCGAACTTAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GRSTRFISPESRGVQKGPADGGA*ASNLGR Trigger: CCTGCCTAAGTTCGAGGCCCAGGCGCCTCCATCAGC...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCAGGCCTGCTTCTTCCTaGGCTCGGCGTCCCTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: GRSTRFISPESRGVQKGPRPASS*ARRPWS Trigger: ACTCCAGGGACGCCGAGCCCAGGAAGAAGCAGGCCT...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCGCTCCTCCCAGGCTCTaGTTGTCATGGACATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GRSTRFISPESRGVQKGPAPPRL*LSWTWL Trigger: CAGCCATGTCCATGACAACCAGAGCCTGGGAGGAGC...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCTGGTTGTCATGGACATaGCTGGAGCAGCAGCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: GRSTRFISPESRGVQKGPWLSWT*LEQQQV Trigger: GACCTGCTGCTGCTCCAGCCATGTCCATGACAACCA...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CCA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCCTTTTTCCATCTTCTTaGGCCTGGTGTCCACACTGG | + |
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Preference number: 4 (lower is better) Translates to: AAALALFRQSRGASRRGPLFPSS*AWCPHW Trigger: CCAGTGTGGACACCAGGCCCAAGAAGATGGAAAAAG...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS CCA 90 bp | TCCCGTGCCCACGGCCGGTGGCCCCCTTCGCGTGACTCCCAGCGCTaGGGTAGGGCTTCCCGGGGCTCCCTGGCGGCCCGTGGCCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SRAHGRWPPSRDSQR*GRASRGSLAARGLS Trigger: GGAGAGGCCACGGGCCGCCAGGGAGCCCCGGGAAGCCCTACCCCAGCGCTGGGAGTCACGCGAAGGGGGCCACCGGCCGTGGGCACGGGA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS CCA 90 bp | GCCTCGGGGACACCCAGGCCTGCTTCTTCCTGGGCTCGGCGTCCCTaGAGTCCCGTGCCCACGGCCGGTGGCCCCCTTCGCGTGACTCCC | + |
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Preference number: 5 (lower is better) Translates to: ASGTPRPASSWARRP*SPVPTAGGPLRVTP Trigger: GGGAGTCACGCGAAGGGGGCCACCGGCCGTGGGCACGGGACTCCAGGGACGCCGAGCCCAGGAAGAAGCAGGCCTGGGTGTCCCCGAGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS GCA 90 bp | CCGCGGCTTCCCCTCTCTCCGAGGCCTCTCCTTGGGTCCCCGGTCTaGGAGGGTCACACGGTCCTCCCGGACGGCCTCTCCGGTGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: PRLPLSPRPLLGSPV*EGHTVLPDGLSGGL Trigger: GAGGCCACCGGAGAGGCCGTCCGGGAGGACCGTGTGACCCTCGCAGACCGGGGACCCAAGGAGAGGCCTCGGAGAGAGGGGAAGCCGCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS GCA 90 bp | TCCCGCCCCTTGCCTGCGCGGAGCTTCTGGCGACTCCCAGGCCGCTaGTCCTCGTCGGGACGCCTCGGGGACACCCAGGCCTGCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SRPLPARSFWRLPGR*SSSGRLGDTQACFF Trigger: GAAGAAGCAGGCCTGGGTGTCCCCGAGGCGTCCCGACGAGGAGCAGCGGCCTGGGAGTCGCCAGAAGCTCCGCGCAGGCAAGGGGCGGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS CCA 90 bp | CCCGGTCTGCGAGGGTCACACGGTCCTCCCGGACGGCCTCTCCGGTaGCCTCGCCGGGCTCCTCTTCGTCGTTCTCTGCAGCCTCCCGAC | + |
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Preference number: 5 (lower is better) Translates to: PGLRGSHGPPGRPLR*PRRAPLRRSLQPPD Trigger: GTCGGGAGGCTGCAGAGAACGACGAAGAGGAGCCCGGCGAGGCCACCGGAGAGGCCGTCCGGGAGGACCGTGTGACCCTCGCAGACCGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CAA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCCCCTCGGGGCTGAGCTaGGCGGGACCCAGGGCTCGG | + |
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Preference number: 5 (lower is better) Translates to: AAALALFRQSRGASRRGPPSGLS*AGPRAR Trigger: CCGAGCCCTGGGTCCCGCCAAGCTCAGCCCCGAGGG...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 72% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CAA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCGCGGTCTGCGCCTTCTaGCGCGCGGGGACGCTCCGA | + |
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Preference number: 5 (lower is better) Translates to: GRSTRFISPESRGVQKGPAVCAF*RAGTLR Trigger: TCGGAGCGTCCCCGCGCGCAAGAAGGCGCAGACCGC...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS TCA 90 bp | CTTCGTCGTTCTCTGCAGCCTCCCGACTCCCGGGAATCTTGGGTCTaGCCTCTGCCTCGGCCCGGGGCGCAGGCGGCGCTGATGGAGGCG | + |
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Preference number: 5 (lower is better) Translates to: LRRSLQPPDSRESWV*PLPRPGAQAALMEA Trigger: CGCCTCCATCAGCGCCGCCTGCGCCCCGGGCCGAGGCAGAGGTCAGACCCAAGATTCCCGGGAGTCGGGAGGCTGCAGAGAACGACGAAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CAA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCGCTCAGTCCCGCCCCTaGCCTGCGCGGAGCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: AAALALFRQSRGASRRGPAQSRP*PARSFW Trigger: CCAGAAGCTCCGCGCAGGCAAGGGGCGGGACTGAGC...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CAA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCCTCGGGCACACGTGCTaGGAGTGCTGCCTCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: AAALALFRQSRGASRRGPLGHTC*ECCLPR Trigger: CCTGGGGAGGCAGCACTCCAAGCACGTGTGCCCGAG...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CAA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCAGGCCGCCAGCCGCTTaGCTGAGCCTTGTGGACAGG | + |
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Preference number: 5 (lower is better) Translates to: GRSTRFISPESRGVQKGPRPPAA*LSLVDR Trigger: CCTGTCCACAAGGCTCAGCAAAGCGGCTGGCGGCCT...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CAA 90 bp | GCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCGCGAGCACCAGGCACTaGTTGAGCGACAGGTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: AAALALFRQSRGASRRGPASTRH*LSDRSP Trigger: GGGAGACCTGTCGCTCAACAAGTGCCTGGTGCTCGC...GGGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CAA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCCCTCCCAGGCTCTGGTaGTCATGGACATGGCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: GRSTRFISPESRGVQKGPPPRLW*SWTWLE Trigger: CTCCAGCCATGTCCATGACAACCAGAGCCTGGGAGG...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS-3UTR CAA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCAGCACCAGGCACTTGTaGAGCGACAGGTCTCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: GRSTRFISPESRGVQKGPSTRHL*SDRSPQ Trigger: CTGGGGAGACCTGTCGCTCAACAAGTGCCTGGTGCT...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS CCA 90 bp | TGGCGGCAGGCTCTTTTTCCATCTTCTTGGGCCTGGTGTCCACACTaGGGCCTTCAGCCACCTGAGAGTCGTGGGGCACGCTGCCGGAGT | + |
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Preference number: 5 (lower is better) Translates to: WRQALFPSSWAWCPH*GLQPPESRGARCRS Trigger: ACTCCGGCAGCGTGCCCCACGACTCTCAGGTGGCTGAAGGCCCCAGTGTGGACACCAGGCCCAAGAAGATGGAAAAAGAGCCTGCCGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000300961.10 ENST00000593238.2 |
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| CDS-3UTR CAA 90 bp | GGCCGCAGCACTCGCTTTATTTCGCCAGAGTCGCGGGGCGTCCAGAAGGGGCCCTCTTTTTCCATCTTCTaGGGCCTGGTGTCCACACTG | + |
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Preference number: 5 (lower is better) Translates to: GRSTRFISPESRGVQKGPSFSIF*GLVSTL Trigger: CAGTGTGGACACCAGGCCCAAGAAGATGGAAAAAGA...GGGCCCCTTCTGGACGCCCCGCGACTCTGGCGAAATAAAGCGAGTGCTGCGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS CCA 72 bp | CACGGCCGGTGGCCCCCTTCGCGTGACTCCCAGCGCTaGGGTAGGGCTTCCCGGGGCTCCCTGGCGGCCCGT | + |
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Preference number: 6 (lower is better) Translates to: HGRWPPSRDSQR*GRASRGSLAAR Trigger: ACGGGCCGCCAGGGAGCCCCGGGAAGCCCTACCCCAGCGCTGGGAGTCACGCGAAGGGGGCCACCGGCCGTG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS CAA 72 bp | CTGGACTCCGGCGCGGGGCCGGCTCAGTCCCGCCCCTaGCCTGCGCGGAGCTTCTGGCGACTCCCAGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: LDSGAGPAQSRP*PARSFWRLPGR Trigger: GCGGCCTGGGAGTCGCCAGAAGCTCCGCGCAGGCAAGGGGCGGGACTGAGCCGGCCCCGCGCCGGAGTCCAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS GCA 72 bp | TGGACTCCGGCGCGGGGCCGGCTCAGTCCCGCCCCTTaGCTGCGCGGAGCTTCTGGCGACTCCCAGGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: WTPARGRLSPAP*LRGASGDSQAA Trigger: AGCGGCCTGGGAGTCGCCAGAAGCTCCGCGCAGGCAAGGGGCGGGACTGAGCCGGCCCCGCGCCGGAGTCCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS GCA 72 bp | TTGCCTGCGCGGAGCTTCTGGCGACTCCCAGGCCGCTaGTCCTCGTCGGGACGCCTCGGGGACACCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LPARSFWRLPGR*SSSGRLGDTQA Trigger: GGCCTGGGTGTCCCCGAGGCGTCCCGACGAGGAGCAGCGGCCTGGGAGTCGCCAGAAGCTCCGCGCAGGCAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS CCA 72 bp | GAGCTTGGCGGGACCCAGGGCTCGGGCACACGTGCTTaGAGTGCTGCCTCCCCAGGGACGGCGTCGCGGCAC | + |
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Preference number: 6 (lower is better) Translates to: ELGGTQGSGTRA*SAASPGTASRH Trigger: GTGCCGCGACGCCGTCCCTGGGGAGGCAGCACTCCAAGCACGTGTGCCCGAGCCCTGGGTCCCGCCAAGCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS CCA 72 bp | ACTCCCAGCGCTGGGGTAGGGCTTCCCGGGGCTCCCTaGCGGCCCGTGGCCTCTCCTCTTTCCGCGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: TPSAGVGLPGAP*RPVASPLSAAS Trigger: AGAGGCCGCGGAAAGAGGAGAGGCCACGGGCCGCCAGGGAGCCCCGGGAAGCCCTACCCCAGCGCTGGGAGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS CCA 72 bp | TCGGCCAGCCTGGGTGTCGCTGAAGCCCTGTCCTCCTaGGTCTCGGCCAGCGCAGAGTGGTCCTCCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SASLGVAEALSS*VSASAEWSSRA Trigger: GGCCCTGGAGGACCACTCTGCGCTGGCCGAGACCCAGGAGGACAGGGCTTCAGCGACACCCAGGCTGGCCGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300961.10 ENST00000593238.2 |
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| CDS CCA 72 bp | CGAGGGTCACACGGTCCTCCCGGACGGCCTCTCCGGTaGCCTCGCCGGGCTCCTCTTCGTCGTTCTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: RGSHGPPGRPLR*PRRAPLRRSLQ Trigger: CTGCAGAGAACGACGAAGAGGAGCCCGGCGAGGCCACCGGAGAGGCCGTCCGGGAGGACCGTGTGACCCTCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS TCA 72 bp | GCAGCGCCACCAGCGAGGCGAGCACCAGGCACTTGTTaGGCGACAGGTCTCCCCAGGGCAGCTCCTCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: AAPPARRAPGTC*ATGLPRAAPRS Trigger: TGAGCGAGGAGCTGCCCTGGGGAGACCTGTCGCTCAACAAGTGCCTGGTGCTCGCCTCGCTGGTGGCGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS CAA 72 bp | AGCAGCGCCACCAGCGAGGCGAGCACCAGGCACTTGTaGAGCGACAGGTCTCCCCAGGGCAGCTCCTCGCTC | + |
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Preference number: 6 (lower is better) Translates to: SSATSEASTRHL*SDRSPQGSSSL Trigger: GAGCGAGGAGCTGCCCTGGGGAGACCTGTCGCTCAACAAGTGCCTGGTGCTCGCCTCGCTGGTGGCGCTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300961.10 |
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| CDS CAA 72 bp | TGCCCAGGCCGCCATCCAGCTCCTCCCAGGCTCTGGTaGTCATGGACATGGCTGGAGCAGCAGCAGGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: CPGRHPAPPRLW*SWTWLEQQQVP Trigger: TGGGACCTGCTGCTGCTCCAGCCATGTCCATGACAACCAGAGCCTGGGAGGAGCTGGATGGCGGCCTGGGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300961.10 ENST00000593238.2 |
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