RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JMY (Homo sapiens)

Ensembl gene IDs: ENSG00000152409

Ensembl transcript IDs: ENST00000396137.5

Found 267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGTTCTACACACCCTCCACCCTCCACTCTTTGCTAGAGACTTATaGTTACAGCACACTCTGGAAGACAGACCACAGGACATATGTATA +
Preference number: 1 (lower is better)
Translates to: GVLHTLHPPLFARDL*LQHTLEDRPQDICI
Trigger: TATACATATGTCCTGTGGTCTGTCTTCCAGAGTGTGCTGTAATCATAAGTCTCTAGCAAAGAGTGGAGGGTGGAGGGTGTGTAGAACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR TCA 90 bp TCCAAGTGTGAGGTGACTCTCATGGAGAACTGTAACAGGATGGGTTaGGAGACTTGTAGATGTATCCATGAGGCTGAGTGGAGTTCTACA +
Preference number: 1 (lower is better)
Translates to: SKCEVTLMENCNRMG*ETCRCIHEAEWSST
Trigger: TGTAGAACTCCACTCAGCCTCATGGATACATCTACAAGTCTCTCAACCCATCCTGTTACAGTTCTCCATGAGAGTCACCTCACACTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR GCA 90 bp GGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATaGCAGCCACGGAGACTTGTCTCTACTTTCTATCTTTGTAGAGCA +
Preference number: 1 (lower is better)
Translates to: GILPKFHSVHVKMVK*QPRRLVSTFYLCRA
Trigger: TGCTCTACAAAGATAGAAAGTAGAGACAAGTCTCCGTGGCTGGCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR GCA 90 bp TGGGTGTGTTGGAAAGTTATTTACAAGAGGATGGGCATAGCTGGCTaGCAACAATACTCTGCTTTAACCTCCTTCTTTTCCAAGTGTGAG +
Preference number: 1 (lower is better)
Translates to: WVCWKVIYKRMGIAG*QQYSALTSFFSKCE
Trigger: CTCACACTTGGAAAAGAAGGAGGTTAAAGCAGAGTATTGTTGGCAGCCAGCTATGCCCATCCTCTTGTAAATAACTTTCCAACACACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR CCA 90 bp GAAATGGGTGTGTTGGAAAGTTATTTACAAGAGGATGGGCATAGCTaGCTGCCAACAATACTCTGCTTTAACCTCCTTCTTTTCCAAGTG +
Preference number: 1 (lower is better)
Translates to: EMGVLESYLQEDGHS*LPTILCFNLLLFQV
Trigger: CACTTGGAAAAGAAGGAGGTTAAAGCAGAGTATTGTTGGCAGCCAGCTATGCCCATCCTCTTGTAAATAACTTTCCAACACACCCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR TCA 90 bp CTGAGTCCAATGATCTACATGTATTCAAGCCCACAACAATCCTGCTaGAAATCTGGAACATATAAATGTGTCCTTCAGGACTCCATCACA +
Preference number: 1 (lower is better)
Translates to: LSPMIYMYSSPQQSC*KSGTYKCVLQDSIT
Trigger: TGTGATGGAGTCCTGAAGGACACATTTATATGTTCCAGATTTTCAGCAGGATTGTTGTGGGCTTGAATACATGTAGATCATTGGACTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR GCA 90 bp GAAAGGCCAAGATCTGTCTTATGCAGAATTATATGTACAGGGTACTaGACACTGAGTCCAATGATCTACATGTATTCAAGCCCACAACAA +
Preference number: 1 (lower is better)
Translates to: ERPRSVLCRIICTGY*TLSPMIYMYSSPQQ
Trigger: TTGTTGTGGGCTTGAATACATGTAGATCATTGGACTCAGTGTGCAGTACCCTGTACATATAATTCTGCATAAGACAGATCTTGGCCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR CCA 90 bp ATTGCACATGTAAAATTCATGTTAACCATCATCTATTGGAACGACTaGAAAGTGATAACCTGCCAATTGTGCTTCCTTTCTTCACACCAC +
Preference number: 1 (lower is better)
Translates to: IAHVKFMLTIIYWND*KVITCQLCFLSSHH
Trigger: GTGGTGTGAAGAAAGGAAGCACAATTGGCAGGTTATCACTTTCCAGTCGTTCCAATAGATGATGGTTAACATGAATTTTACATGTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR TCA 90 bp CAGATAAGATGTGGGAATAGTGTGGGAACTAAAACCAATGTATTATaGAGATGCTGCAGAGAAGCTCCTAGTCTCATCAATAAACGTATT +
Preference number: 1 (lower is better)
Translates to: QIRCGNSVGTKTNVL*RCCREAPSLINKRI
Trigger: AATACGTTTATTGATGAGACTAGGAGCTTCTCTGCAGCATCTTCATAATACATTGGTTTTAGTTCCCACACTATTCCCACATCTTATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR TCA 90 bp GTCTACTATGGCCCAAGTATGCTTTGCAACTTGACACACATTCTGTaGTATAAAGTGGCCATGCCATATGTTACCAAATATTACTACATA +
Preference number: 1 (lower is better)
Translates to: VYYGPSMLCNLTHIL*YKVAMPYVTKYYYI
Trigger: TATGTAGTAATATTTGGTAACATATGGCATGGCCACTTTATATCACAGAATGTGTGTCAAGTTGCAAAGCATACTTGGGCCATAGTAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR TCA 90 bp AGTAATGCGGACATTTTAGGTGTATTTCCATTTGATTTTAATGCCTaGCTTACAGCTATCATGATGATAAACTTTCTCAGAGTGTCACAG +
Preference number: 1 (lower is better)
Translates to: SNADILGVFPFDFNA*LTAIMMINFLRVSQ
Trigger: CTGTGACACTCTGAGAAAGTTTATCATCATGATAGCTGTAAGTCAGGCATTAAAATCAAATGGAAATACACCTAAAATGTCCGCATTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR TCA 90 bp ATGGTTCTCAAAGCAGTCCCAATACAGCTCACAGTAGATCTCTGTCAACCCAGTACACCACTGAACCAATaGACTTTGGATCTAATGTTA +
Preference number: 2 (lower is better)
Translates to: MVLKAVPIQLTVDLCQPSTPLNQ*TLDLML
Trigger: TAACATTAGATCCAAAGTTCATTGGTTCAGTGGTGT...ACTGGGTTGACAGAGATCTACTGTGAGCTGTATTGGGACTGCTTTGAGAACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR GCA 90 bp CACATAAAAAGTACGGGCGAGTTTGGAACTGGAAATGTGAGCATCTACAAGTACATAACCTGCCAATTGTaGTTCCTTTCTTCACACCAC +
Preference number: 2 (lower is better)
Translates to: HIKSTGEFGTGNVSIYKYITCQL*FLSSHH
Trigger: GTGGTGTGAAGAAAGGAAGCACAATTGGCAGGTTAT...GTACTTGTAGATGCTCACATTTCCAGTTCCAAACTCGCCCGTACTTTTTATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR GCA 90 bp CACATAAAAAGTACGGGCGAGTTTGGAACTGGAAATGTGAGCATCTACAAGTACGGGCATGGTGGCATGTaGCTGTTTTGTTTTGAAATA +
Preference number: 2 (lower is better)
Translates to: HIKSTGEFGTGNVSIYKYGHGGM*LFCFEI
Trigger: TATTTCAAAACAAAACAGGCACATGCCACCATGCCC...GTACTTGTAGATGCTCACATTTCCAGTTCCAAACTCGCCCGTACTTTTTATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR GCA 90 bp ATGAATGTTCCAGGGTTTCTGGTTAATTTAACATTAGATCCGTCCGTATTTTTCCCGAGGCTGGCAGATTaGTTGAGTCCAGGAGTTCAA +
Preference number: 2 (lower is better)
Translates to: MNVPGFLVNLTLDPSVFFPRLAD*LSPGVQ
Trigger: TTGAACTCCTGGACTCAAGCAATCTGCCAGCCTCGG...GAAAAATACGGACGGATCTAATGTTAAATTAACCAGAAACCCTGGAACATTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR GCA 90 bp TCTGTACATGCACCTTACAGTGGCATAATGTCTCTGCAGAAGGGAAGAGACAGTTCCAAACAGAGAGAATaGTGCCCATTAGTTTTTGTT +
Preference number: 2 (lower is better)
Translates to: SVHAPYSGIMSLQKGRDSSKQRE*CPLVFV
Trigger: AACAAAAACTAATGGGCAGCATTCTCTCTGTTTGGA...ACTGTCTCTTCCCTTCTGCAGAGACATTATGCCACTGTAAGGTGCATGTACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR TCA 90 bp GTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTGGAAAGTTAAAAACCAATGTATTATaGAGATGCTGCAGAGAAGCT +
Preference number: 2 (lower is better)
Translates to: VEVGTCTLRQGNGCVGKLKTNVL*RCCREA
Trigger: AGCTTCTCTGCAGCATCTTCATAATACATTGGTTTT...TAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR TCA 90 bp ATACTGATCCCATTCCAAACAGAGAGAATGCTGCCCATTAGTTTTTGTTTCACTTTCCCTCTCAAGATATaGATGTTCCAGGGTTTCTGG +
Preference number: 2 (lower is better)
Translates to: ILIPFQTERMLPISFCFTFPLKI*MFQGFW
Trigger: CCAGAAACCCTGGAACATTCATATCTTGAGAGGGAA...AGTGAAACAAAAACTAATGGGCAGCATTCTCTCTGTTTGGAATGGGATCAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR GCA 90 bp ATGAATGTTCCAGGGTTTCTGGTTAATTTAACATTAGATCCGTCCGTATTTTTCGTGAAGATGGTGAAATaGCAGCCACGGAGACTTGTC +
Preference number: 2 (lower is better)
Translates to: MNVPGFLVNLTLDPSVFFVKMVK*QPRRLV
Trigger: GACAAGTCTCCGTGGCTGGCATTTCACCATCTTCAC...GAAAAATACGGACGGATCTAATGTTAAATTAACCAGAAACCCTGGAACATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR GCA 90 bp TCTGTACATGCACCTTACAGTGGCATAATGTCTCTGCAGAAGGGAAGAGACAGTAGGCATTCCTCATACTaGTGTAATATACACAATGAT +
Preference number: 2 (lower is better)
Translates to: SVHAPYSGIMSLQKGRDSRHSSY*CNIHND
Trigger: ATCATTGTGTATATTACAGCAGTATGAGGAATGCCT...ACTGTCTCTTCCCTTCTGCAGAGACATTATGCCACTGTAAGGTGCATGTACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR GCA 90 bp ATACTGATCCCATTCCAAACAGAGAGAATGCTGCCCATTAGTTTTTGTTTCACTGGCCCAAGTATGCTTTaGAACTTGACACACATTCTG +
Preference number: 2 (lower is better)
Translates to: ILIPFQTERMLPISFCFTGPSML*NLTHIL
Trigger: CAGAATGTGTGTCAAGTTGCAAAGCATACTTGGGCC...AGTGAAACAAAAACTAATGGGCAGCATTCTCTCTGTTTGGAATGGGATCAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR CCA 90 bp AACAAAGGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATGCATCTATTGGAACGACTaGAAAGTGATAACCTGCCAA +
Preference number: 2 (lower is better)
Translates to: NKGILPKFHSVHVKMVKCIYWND*KVITCQ
Trigger: TTGGCAGGTTATCACTTTCCAGTCGTTCCAATAGAT...GCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCCTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR CCA 90 bp GTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTGGAAAGTTATTAACCATCATCTATTaGAACGACTGGAAAGTGATA +
Preference number: 2 (lower is better)
Translates to: VEVGTCTLRQGNGCVGKLLTIIY*NDWKVI
Trigger: TATCACTTTCCAGTCGTTCCAATAGATGATGGTTAA...TAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR TCA 90 bp ATGAATGTTCCAGGGTTTCTGGTTAATTTAACATTAGATCCGTCCGTATTTTTCCTTTCTTCACACCACTaGACCAATGAACTTTGGATC +
Preference number: 2 (lower is better)
Translates to: MNVPGFLVNLTLDPSVFFLSSHH*TNELWI
Trigger: GATCCAAAGTTCATTGGTTCAGTGGTGTGAAGAAAG...GAAAAATACGGACGGATCTAATGTTAAATTAACCAGAAACCCTGGAACATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR TCA 90 bp ATACTGATCCCATTCCAAACAGAGAGAATGCTGCCCATTAGTTTTTGTTTCACTGTATGCTTTGCAACTTaGCACACATTCTGTGATATA +
Preference number: 2 (lower is better)
Translates to: ILIPFQTERMLPISFCFTVCFAT*HTFCDI
Trigger: TATATCACAGAATGTGTGTCAAGTTGCAAAGCATAC...AGTGAAACAAAAACTAATGGGCAGCATTCTCTCTGTTTGGAATGGGATCAGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR CCA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTAGAACTGTAACAGGATaGGTTGAGAGACTTGTAGAT +
Preference number: 2 (lower is better)
Translates to: KLTVKWAVTLISKCPKLIRTVTG*VERLVD
Trigger: ATCTACAAGTCTCTCAACCCATCCTGTTACAGTTCT...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR TCA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTCCACAACAATCCTGCTaGAAATCTGGAACATATAAA +
Preference number: 2 (lower is better)
Translates to: KLTVKWAVTLISKCPKLIPQQSC*KSGTYK
Trigger: TTTATATGTTCCAGATTTTCAGCAGGATTGTTGTGG...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR GCA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTTCTTACATAACCTGTTaGCAGAAAATTTTCTCCCTA +
Preference number: 2 (lower is better)
Translates to: KLTVKWAVTLISKCPKLISYITC*QKIFSL
Trigger: TAGGGAGAAAATTTTCTGGCAACAGGTTATGTAAGA...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR CAA 90 bp CACATAAAAAGTACGGGCGAGTTTGGAACTGGAAATGTGAGCATCTACAAGTACAGGCTGGCAGATTGCTaGAGTCCAGGAGTTCAAGAC +
Preference number: 3 (lower is better)
Translates to: HIKSTGEFGTGNVSIYKYRLADC*SPGVQD
Trigger: GTCTTGAACTCCTGGACTCAAGCAATCTGCCAGCCT...GTACTTGTAGATGCTCACATTTCCAGTTCCAAACTCGCCCGTACTTTTTATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR CCA 72 bp AGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTaGAAAGTTATTTACAAGAGGATGGGCATAGCTGGC +
Preference number: 3 (lower is better)
Translates to: RNLHLKARKWVC*KVIYKRMGIAG
Trigger: GCCAGCTATGCCCATCCTCTTGTAAATAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR CAA 90 bp TCTGTACATGCACCTTACAGTGGCATAATGTCTCTGCAGAAGGGAAGAGACAGTTGGCCCAAGTATGCTTaGCAACTTGACACACATTCT +
Preference number: 3 (lower is better)
Translates to: SVHAPYSGIMSLQKGRDSWPKYA*QLDTHS
Trigger: AGAATGTGTGTCAAGTTGCAAAGCATACTTGGGCCA...ACTGTCTCTTCCCTTCTGCAGAGACATTATGCCACTGTAAGGTGCATGTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR CCA 72 bp TGTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATaGGTGTGTTGGAAAGTTATTTACAAGAGGATGGGC +
Preference number: 3 (lower is better)
Translates to: CRSRNLHLKARK*VCWKVIYKRMG
Trigger: GCCCATCCTCTTGTAAATAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR CAA 90 bp CACATAAAAAGTACGGGCGAGTTTGGAACTGGAAATGTGAGCATCTACAAGTACATATACACTGGGCTTTaGCTCCAGTACTGCTTTCTG +
Preference number: 3 (lower is better)
Translates to: HIKSTGEFGTGNVSIYKYIYTGL*LQYCFL
Trigger: CAGAAAGCAGTACTGGAGCAAAAGCCCAGTGTATAT...GTACTTGTAGATGCTCACATTTCCAGTTCCAAACTCGCCCGTACTTTTTATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR GCA 72 bp TTAACTCCCTCCACAGAAAGGCCAAGATCTGTCTTATaGAGAATTATATGTACAGGGTACTGCACACTGAGT +
Preference number: 3 (lower is better)
Translates to: LTPSTERPRSVL*RIICTGYCTLS
Trigger: ACTCAGTGTGCAGTACCCTGTACATATAATTCTGCATAAGACAGATCTTGGCCTTTCTGTGGAGGGAGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR GCA 72 bp TGGAAAGTTATTTACAAGAGGATGGGCATAGCTGGCTaGCAACAATACTCTGCTTTAACCTCCTTCTTTTCC +
Preference number: 3 (lower is better)
Translates to: WKVIYKRMGIAG*QQYSALTSFFS
Trigger: GGAAAAGAAGGAGGTTAAAGCAGAGTATTGTTGGCAGCCAGCTATGCCCATCCTCTTGTAAATAACTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR CCA 72 bp GTGTTGGAAAGTTATTTACAAGAGGATGGGCATAGCTaGCTGCCAACAATACTCTGCTTTAACCTCCTTCTT +
Preference number: 3 (lower is better)
Translates to: VLESYLQEDGHS*LPTILCFNLLL
Trigger: AAGAAGGAGGTTAAAGCAGAGTATTGTTGGCAGCCAGCTATGCCCATCCTCTTGTAAATAACTTTCCAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR CCA 72 bp AACCTCAGAGGTATTTTCTGTACATGCACCTTACAGTaGCATAATGTCTCTGCAGAAGGGAAGAGACAGTAT +
Preference number: 3 (lower is better)
Translates to: NLRGIFCTCTLQ*HNVSAEGKRQY
Trigger: ATACTGTCTCTTCCCTTCTGCAGAGACATTATGCCACTGTAAGGTGCATGTACAGAAAATACCTCTGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR CAA 90 bp CACATAAAAAGTACGGGCGAGTTTGGAACTGGAAATGTGAGCATCTACAAGTACGTTAACCATCATCTATaGGAACGACTGGAAAGTGAT +
Preference number: 3 (lower is better)
Translates to: HIKSTGEFGTGNVSIYKYVNHHL*ERLESD
Trigger: ATCACTTTCCAGTCGTTCCAATAGATGATGGTTAAC...GTACTTGTAGATGCTCACATTTCCAGTTCCAAACTCGCCCGTACTTTTTATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR CAA 90 bp TTGTGTTATGAGAAAAGCTCTACATTTCTATTCCCACTATTACAGCTGTGTCTAACCACCCCCATGCTGTaGAAGCTTCCATATTACATC +
Preference number: 3 (lower is better)
Translates to: LCYEKSSTFLFPLLQLCLTTPML*KLPYYI
Trigger: GATGTAATATGGAAGCTTCAACAGCATGGGGGTGGT...TAGACACAGCTGTAATAGTGGGAATAGAAATGTAGAGCTTTTCTCATAACACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR TCA 72 bp TGTGGGAATAGTGTGGGAACTAAAACCAATGTATTATaGAGATGCTGCAGAGAAGCTCCTAGTCTCATCAAT +
Preference number: 3 (lower is better)
Translates to: CGNSVGTKTNVL*RCCREAPSLIN
Trigger: ATTGATGAGACTAGGAGCTTCTCTGCAGCATCTTCATAATACATTGGTTTTAGTTCCCACACTATTCCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR TCA 72 bp GGCCCAAGTATGCTTTGCAACTTGACACACATTCTGTaGTATAAAGTGGCCATGCCATATGTTACCAAATAT +
Preference number: 3 (lower is better)
Translates to: GPSMLCNLTHIL*YKVAMPYVTKY
Trigger: ATATTTGGTAACATATGGCATGGCCACTTTATATCACAGAATGTGTGTCAAGTTGCAAAGCATACTTGGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR-3UTR CAA 90 bp TTGTGTTATGAGAAAAGCTCTACATTTCTATTCCCACTATTACAGCTGTGTCTATCCACCCTCCACTCTTaGCTAGAGACTTATGATTAC +
Preference number: 3 (lower is better)
Translates to: LCYEKSSTFLFPLLQLCLSTLHS*LETYDY
Trigger: GTAATCATAAGTCTCTAGCAAAGAGTGGAGGGTGGA...TAGACACAGCTGTAATAGTGGGAATAGAAATGTAGAGCTTTTCTCATAACACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR TCA 72 bp ATGATCTACATGTATTCAAGCCCACAACAATCCTGCTaGAAATCTGGAACATATAAATGTGTCCTTCAGGAC +
Preference number: 3 (lower is better)
Translates to: MIYMYSSPQQSC*KSGTYKCVLQD
Trigger: GTCCTGAAGGACACATTTATATGTTCCAGATTTTCAGCAGGATTGTTGTGGGCTTGAATACATGTAGATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR GCA 72 bp AGATCTGTCTTATGCAGAATTATATGTACAGGGTACTaGACACTGAGTCCAATGATCTACATGTATTCAAGC +
Preference number: 3 (lower is better)
Translates to: RSVLCRIICTGY*TLSPMIYMYSS
Trigger: GCTTGAATACATGTAGATCATTGGACTCAGTGTGCAGTACCCTGTACATATAATTCTGCATAAGACAGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR CCA 72 bp CAATATTTTGAAGCACATAAAAAGTACGGGCGAGTTTaGAACTGGAAATGTGAGCATCTACAAGTACCATCA +
Preference number: 3 (lower is better)
Translates to: QYFEAHKKYGRV*NWKCEHLQVPS
Trigger: TGATGGTACTTGTAGATGCTCACATTTCCAGTTCCAAACTCGCCCGTACTTTTTATGTGCTTCAAAATATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR CCA 72 bp GTAAAATTCATGTTAACCATCATCTATTGGAACGACTaGAAAGTGATAACCTGCCAATTGTGCTTCCTTTCT +
Preference number: 3 (lower is better)
Translates to: VKFMLTIIYWND*KVITCQLCFLS
Trigger: AGAAAGGAAGCACAATTGGCAGGTTATCACTTTCCAGTCGTTCCAATAGATGATGGTTAACATGAATTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR CCA 72 bp ATTGCACATGTAAAATTCATGTTAACCATCATCTATTaGAACGACTGGAAAGTGATAACCTGCCAATTGTGC +
Preference number: 3 (lower is better)
Translates to: IAHVKFMLTIIY*NDWKVITCQLC
Trigger: GCACAATTGGCAGGTTATCACTTTCCAGTCGTTCCAATAGATGATGGTTAACATGAATTTTACATGTGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp GTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTGGAAAGTTACAGGCCGGCGCTGTATaGGTCCCGGTCGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: VEVGTCTLRQGNGCVGKLQAGAV*VPVARP
Trigger: TGGGCGAGCGACCGGGACGCATACAGCGCCGGCCTG...TAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp AGGCCAAGATCTGTCTTATGCAGAATTATATGTACAGGGTACTGCACACTGAGTGCGAGGCCGTGGAGCTaGGTCTGCGGCGCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: RPRSVLCRIICTGYCTLSARPWS*VCGAPV
Trigger: CACCGGAGCGCCGCAGACGCAGCTCCACGGCCTCGC...ACTCAGTGTGCAGTACCCTGTACATATAATTCTGCATAAGACAGATCTTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp ATGGTTCTCAAAGCAGTCCCAATACAGCTCACAGTAGATCTCTGTCAACCCAGTTCTCCGCCCCTTTGCTaGCAGGACTCCGCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: MVLKAVPIQLTVDLCQPSSPPLC*QDSAAA
Trigger: CGCGGCTGCGGAGTCCTGGCAGCAAAGGGGCGGAGA...ACTGGGTTGACAGAGATCTACTGTGAGCTGTATTGGGACTGCTTTGAGAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp TCTGTACATGCACCTTACAGTGGCATAATGTCTCTGCAGAAGGGAAGAGACAGTAGCCCGGAGCCGGCCTaGCTGATGAACCCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SVHAPYSGIMSLQKGRDSSPEPA*LMNPSP
Trigger: AGGAGACGGGTTCATCAGTCAGGCCGGCTCCGGGCT...ACTGTCTCTTCCCTTCTGCAGAGACATTATGCCACTGTAAGGTGCATGTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp TCTGTACATGCACCTTACAGTGGCATAATGTCTCTGCAGAAGGGAAGAGACAGTCCAGAAGGCTGCGAGTaGTCCGAGGAGAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: SVHAPYSGIMSLQKGRDSPEGCE*SEESRP
Trigger: AGGGCGGCTCTCCTCGGAGCACTCGCAGCCTTCTGG...ACTGTCTCTTCCCTTCTGCAGAGACATTATGCCACTGTAAGGTGCATGTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp GTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTGGAAAGTTACCGCTCCTCTGCCTCTaGGCCGTCCGGTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VEVGTCTLRQGNGCVGKLPLLCL*AVRLWQ
Trigger: CTGCCACAACCGGACGGCCCAGAGGCAGAGGAGCGG...TAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp GTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTGGAAAGTTAGAGTTGCAGAGGCAGTaGCCTCGGGCCGACCCCTGC +
Preference number: 4 (lower is better)
Translates to: VEVGTCTLRQGNGCVGKLELQRQ*PRADPC
Trigger: GCAGGGGTCGGCCCGAGGCCACTGCCTCTGCAACTC...TAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp AGGCCAAGATCTGTCTTATGCAGAATTATATGTACAGGGTACTGCACACTGAGTGAGCACAGCTGCTGGTaGACGGCGCGCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RPRSVLCRIICTGYCTLSEHSCW*TARRSW
Trigger: CCAGGACCTGCGCGCCGTGCACCAGCAGCTGTGCTC...ACTCAGTGTGCAGTACCCTGTACATATAATTCTGCATAAGACAGATCTTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp ATACTGATCCCATTCCAAACAGAGAGAATGCTGCCCATTAGTTTTTGTTTCACTGAGACTCCAGCTCGGTaGCGGGCGGCGGCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: ILIPFQTERMLPISFCFTETPAR*RAAAAP
Trigger: CGGAGCAGCCGCCGCCCGCCACCGAGCTGGAGTCTC...AGTGAAACAAAAACTAATGGGCAGCATTCTCTCTGTTTGGAATGGGATCAGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp ATACTGATCCCATTCCAAACAGAGAGAATGCTGCCCATTAGTTTTTGTTTCACTCGCCCCCGCCCCTGGTaGTGCTGCAGAAAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: ILIPFQTERMLPISFCFTRPRPW*CCRKPG
Trigger: TCCGGGCTTTCTGCAGCAGCACCAGGGGCGGGGGCG...AGTGAAACAAAAACTAATGGGCAGCATTCTCTCTGTTTGGAATGGGATCAGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp TCTGTACATGCACCTTACAGTGGCATAATGTCTCTGCAGAAGGGAAGAGACAGTCGCCGAGCTCCTTTGTaGCGCGGATCGAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SVHAPYSGIMSLQKGRDSRRAPL*RGSREG
Trigger: TCCTTCTCTCGATCCGCGCCACAAAGGAGCTCGGCG...ACTGTCTCTTCCCTTCTGCAGAGACATTATGCCACTGTAAGGTGCATGTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp CACATAAAAAGTACGGGCGAGTTTGGAACTGGAAATGTGAGCATCTACAAGTACCGCTCGTCGAACACATaGGGCCGCACAGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: HIKSTGEFGTGNVSIYKYRSSNT*GRTATQ
Trigger: CTGGGTGGCTGTGCGGCCCCATGTGTTCGACGAGCG...GTACTTGTAGATGCTCACATTTCCAGTTCCAAACTCGCCCGTACTTTTTATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp ATGGTTCTCAAAGCAGTCCCAATACAGCTCACAGTAGATCTCTGTCAACCCAGTTTTTCTGACCCGGGATaGGTTTGGCCCGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: MVLKAVPIQLTVDLCQPSFSDPG*VWPALG
Trigger: GCCCAGTGCGGGCCAAACCCATCCCGGGTCAGAAAA...ACTGGGTTGACAGAGATCTACTGTGAGCTGTATTGGGACTGCTTTGAGAACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp CAACTGAGGAACCAAGTGCTTAAACTGTCATTTTCCAAAAGAATCAGAACCAATACACCTGGGCCTCTCTaGGCGCCGGCCGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QLRNQVLKLSFSKRIRTNTPGPL*APAGLL
Trigger: CAGCAGCCCGGCCGGCGCCCAGAGAGGCCCAGGTGT...ATTGGTTCTGATTCTTTTGGAAAATGACAGTTTAAGCACTTGGTTCCTCAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp GAACCAATGAACTTTGGATCTAATGTTATCCAACTGAGGAACCAAGTGCTTAAACCCCGCCCCTGGTGCTaGTGCAGAAAGCCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: EPMNFGSNVIQLRNQVLKPRPWC*CRKPGA
Trigger: GGCTCCGGGCTTTCTGCAGCAGCACCAGGGGCGGGG...TTTAAGCACTTGGTTCCTCAGTTGGATAACATTAGATCCAAAGTTCATTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp GAACCAATGAACTTTGGATCTAATGTTATCCAACTGAGGAACCAAGTGCTTAAACGGGAGCCGCTCCTCTaGCTCTGGGCCGTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: EPMNFGSNVIQLRNQVLKREPLL*LWAVRL
Trigger: CAACCGGACGGCCCAGAGGCAGAGGAGCGGCTCCCG...TTTAAGCACTTGGTTCCTCAGTTGGATAACATTAGATCCAAAGTTCATTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp AACAAAGGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATGCGGTCCCCCAGAAGGCTaGGAGTGCTCCGAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: NKGILPKFHSVHVKMVKCGPPEG*ECSEES
Trigger: GCTCTCCTCGGAGCACTCGCAGCCTTCTGGGGGACC...GCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCCTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp GTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTGGAAAGTTACGAGAGCGCCAGAGGTaGCTCGTCCTCCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: VEVGTCTLRQGNGCVGKLRERQR*LVLLHH
Trigger: ATGGTGAAGGAGGACGAGGCACCTCTGGCGCTCTCG...TAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp ATACTGATCCCATTCCAAACAGAGAGAATGCTGCCCATTAGTTTTTGTTTCACTGCGCGAACGACATGGTaGCTCCGGCTTCTCGCCGCG +
Preference number: 4 (lower is better)
Translates to: ILIPFQTERMLPISFCFTARTTW*LRLLAA
Trigger: CGCGGCGAGAAGCCGGAGCCACCATGTCGTTCGCGC...AGTGAAACAAAAACTAATGGGCAGCATTCTCTCTGTTTGGAATGGGATCAGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp GTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTGGAAAGTTACACCTCATCCATGGGTaGGCTCACTCTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VEVGTCTLRQGNGCVGKLHLIHG*AHSPPL
Trigger: CAGAGGAGGAGAGTGAGCTCACCCATGGATGAGGTG...TAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp ATACTGATCCCATTCCAAACAGAGAGAATGCTGCCCATTAGTTTTTGTTTCACTGACTCTCCGCCCCTTTaGTGCCAGGACTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: ILIPFQTERMLPISFCFTDSPPL*CQDSAA
Trigger: GGCTGCGGAGTCCTGGCAGCAAAGGGGCGGAGAGTC...AGTGAAACAAAAACTAATGGGCAGCATTCTCTCTGTTTGGAATGGGATCAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp ATGGTTCTCAAAGCAGTCCCAATACAGCTCACAGTAGATCTCTGTCAACCCAGTTGGGCCGTCCGGTTGTaGCAGGTTATGGCAAACTTG +
Preference number: 4 (lower is better)
Translates to: MVLKAVPIQLTVDLCQPSWAVRL*QVMANL
Trigger: CAAGTTTGCCATAACCTGCCACAACCGGACGGCCCA...ACTGGGTTGACAGAGATCTACTGTGAGCTGTATTGGGACTGCTTTGAGAACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp AGGCCAAGATCTGTCTTATGCAGAATTATATGTACAGGGTACTGCACACTGAGTGCTTCTTCCGTGCACTaGCCAGCTGGCTGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: RPRSVLCRIICTGYCTLSASSVH*PAGCCQ
Trigger: TTGACAGCAGCCAGCTGGTCAGTGCACGGAAGAAGC...ACTCAGTGTGCAGTACCCTGTACATATAATTCTGCATAAGACAGATCTTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp GTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTGGAAAGTTATCTGAGCTTCTTCCGTaGACTGACCAGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VEVGTCTLRQGNGCVGKLSELLP*TDQLAA
Trigger: AGCAGCCAGCTGGTCAGTGCACGGAAGAAGCTCAGA...TAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp TCTGTACATGCACCTTACAGTGGCATAATGTCTCTGCAGAAGGGAAGAGACAGTCCGAGGCTGGCAGATTaGTTGAGTCCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: SVHAPYSGIMSLQKGRDSPRLAD*LSPGVQ
Trigger: TTGAACTCCTGGACTCAAGCAATCTGCCAGCCTCGG...ACTGTCTCTTCCCTTCTGCAGAGACATTATGCCACTGTAAGGTGCATGTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp GAACCAATGAACTTTGGATCTAATGTTATCCAACTGAGGAACCAAGTGCTTAAACCAGCGCGAACGACATaGTGGCTCCGGCTTCTCGCC +
Preference number: 4 (lower is better)
Translates to: EPMNFGSNVIQLRNQVLKPARTT*WLRLLA
Trigger: GGCGAGAAGCCGGAGCCACCATGTCGTTCGCGCTGG...TTTAAGCACTTGGTTCCTCAGTTGGATAACATTAGATCCAAAGTTCATTGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp AACAAAGGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATGCGGGTTTGGCCCGCACTaGGCTCCTAAGACGACTCTC +
Preference number: 4 (lower is better)
Translates to: NKGILPKFHSVHVKMVKCGFGPH*APKTTL
Trigger: GAGAGTCGTCTTAGGAGCCCAGTGCGGGCCAAACCC...GCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCCTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp TTGTGTTATGAGAAAAGCTCTACATTTCTATTCCCACTATTACAGCTGTGTCTACGTACAGAGGACACCTaGGCCTCTCTGGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: LCYEKSSTFLFPLLQLCLRTEDT*ASLGAG
Trigger: GCCGGCGCCCAGAGAGGCCCAGGTGTCCTCTGTACG...TAGACACAGCTGTAATAGTGGGAATAGAAATGTAGAGCTTTTCTCATAACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTACCGAGCACAGCTGCTaGTGCACGGCGCGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KLTVKWAVTLISKCPKLITEHSC*CTARRS
Trigger: GGACCTGCGCGCCGTGCACCAGCAGCTGTGCTCGGT...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp TTGTGTTATGAGAAAAGCTCTACATTTCTATTCCCACTATTACAGCTGTGTCTATTCACCGAGCACAGCTaGTGGTGCACGGCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LCYEKSSTFLFPLLQLCLFTEHS*WCTARR
Trigger: CCTGCGCGCCGTGCACCAGCAGCTGTGCTCGGTGAA...TAGACACAGCTGTAATAGTGGGAATAGAAATGTAGAGCTTTTCTCATAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp AGGCCAAGATCTGTCTTATGCAGAATTATATGTACAGGGTACTGCACACTGAGTAACCCGTCCACGTCTTaGTTCCAGCTGGCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: RPRSVLCRIICTGYCTLSNPSTS*FQLACF
Trigger: AAAGCACGCCAGCTGGAAGCAAGACGTGGACGGGTT...ACTCAGTGTGCAGTACCCTGTACATATAATTCTGCATAAGACAGATCTTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp ATGGTTCTCAAAGCAGTCCCAATACAGCTCACAGTAGATCTCTGTCAACCCAGTGTGAAGATGGTGAAATaGCAGCCACGGAGACTTGTC +
Preference number: 4 (lower is better)
Translates to: MVLKAVPIQLTVDLCQPSVKMVK*QPRRLV
Trigger: GACAAGTCTCCGTGGCTGGCATTTCACCATCTTCAC...ACTGGGTTGACAGAGATCTACTGTGAGCTGTATTGGGACTGCTTTGAGAACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp AACAAAGGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATGCGTGCTGAGGGGGCACTaGCTGACTTTGGGATCCTCT +
Preference number: 4 (lower is better)
Translates to: NKGILPKFHSVHVKMVKCVLRGH*LTLGSS
Trigger: AGAGGATCCCAAAGTCAGCCAGTGCCCCCTCAGCAC...GCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCCTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp AACAAAGGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATGCTCTGCCGCAGCTCGCTaGGGCTTTCGTAATACTCCT +
Preference number: 4 (lower is better)
Translates to: NKGILPKFHSVHVKMVKCSAAAR*GFRNTP
Trigger: AGGAGTATTACGAAAGCCTCAGCGAGCTGCGGCAGA...GCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCCTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp CACATAAAAAGTACGGGCGAGTTTGGAACTGGAAATGTGAGCATCTACAAGTACCTCCTCTTCGTCCTCTaGCTCTGGGGATGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: HIKSTGEFGTGNVSIYKYLLFVL*LWGCFF
Trigger: AAAGAAGCATCCCCAGAGTCAGAGGACGAAGAGGAG...GTACTTGTAGATGCTCACATTTCCAGTTCCAAACTCGCCCGTACTTTTTATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp AACAAAGGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATGCCCGTCTCCTAAACTCTaGGCCTCAGCATCGCCACAA +
Preference number: 4 (lower is better)
Translates to: NKGILPKFHSVHVKMVKCPSPKL*ASASPQ
Trigger: TTGTGGCGATGCTGAGGCGCAGAGTTTAGGAGACGG...GCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCCTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTACAGTCCGGCCCAGCTaGACTCTTCGGCCGGAGACT +
Preference number: 4 (lower is better)
Translates to: KLTVKWAVTLISKCPKLITVRPS*TLRPET
Trigger: AGTCTCCGGCCGAAGAGTGCAGCTGGGCCGGACTGT...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp ATGGTTCTCAAAGCAGTCCCAATACAGCTCACAGTAGATCTCTGTCAACCCAGTCCAGCATGGCCTCCATaGTTTCGTAAGTGTCATAGT +
Preference number: 4 (lower is better)
Translates to: MVLKAVPIQLTVDLCQPSPAWPP*FRKCHS
Trigger: ACTATGACACTTACGAAAGCATGGAGGCCATGCTGG...ACTGGGTTGACAGAGATCTACTGTGAGCTGTATTGGGACTGCTTTGAGAACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp TCTGTACATGCACCTTACAGTGGCATAATGTCTCTGCAGAAGGGAAGAGACAGTGGTTGTGGCAGGTTATaGCAAACTTGCCCTCAATCT +
Preference number: 4 (lower is better)
Translates to: SVHAPYSGIMSLQKGRDSGCGRL*QTCPQS
Trigger: AGATTGAGGGCAAGTTTGCCATAACCTGCCACAACC...ACTGTCTCTTCCCTTCTGCAGAGACATTATGCCACTGTAAGGTGCATGTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp ATACTGATCCCATTCCAAACAGAGAGAATGCTGCCCATTAGTTTTTGTTTCACTTCGGTGAAGAGCACCTaGGAGAGGATCTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: ILIPFQTERMLPISFCFTSVKST*ERIFQP
Trigger: CGGCTGGAAGATCCTCTCCCAGGTGCTCTTCACCGA...AGTGAAACAAAAACTAATGGGCAGCATTCTCTCTGTTTGGAATGGGATCAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp ATACTGATCCCATTCCAAACAGAGAGAATGCTGCCCATTAGTTTTTGTTTCACTCCTGGATGCGCTTCCTaGCCCGCTGAAGCACTTCTT +
Preference number: 4 (lower is better)
Translates to: ILIPFQTERMLPISFCFTPGCAS*PAEALL
Trigger: AAGAAGTGCTTCAGCGGGCCAGGAAGCGCATCCAGG...AGTGAAACAAAAACTAATGGGCAGCATTCTCTCTGTTTGGAATGGGATCAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp ATACTGATCCCATTCCAAACAGAGAGAATGCTGCCCATTAGTTTTTGTTTCACTTTATCCAAGAGCTCCTaGATGCGCTTCCTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: ILIPFQTERMLPISFCFTLSKSS*MRFLAR
Trigger: GCGGGCCAGGAAGCGCATCCAGGAGCTCTTGGATAA...AGTGAAACAAAAACTAATGGGCAGCATTCTCTCTGTTTGGAATGGGATCAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp AACAAAGGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATGCCGTGCACTGACCAGCTaGCTGCTGTCAAAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: NKGILPKFHSVHVKMVKCRALTS*LLSKRC
Trigger: ACACCTCTTTGACAGCAGCCAGCTGGTCAGTGCACG...GCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCCTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp TCTGTACATGCACCTTACAGTGGCATAATGTCTCTGCAGAAGGGAAGAGACAGTTTAGCTGGGGCATGGTaGCATGTGCCTGTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SVHAPYSGIMSLQKGRDSLAGAW*HVPVLF
Trigger: AAACAAAACAGGCACATGCCACCATGCCCCAGCTAA...ACTGTCTCTTCCCTTCTGCAGAGACATTATGCCACTGTAAGGTGCATGTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp TCTGTACATGCACCTTACAGTGGCATAATGTCTCTGCAGAAGGGAAGAGACAGTAAATTAGCTGGGGCATaGTGGCATGTGCCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SVHAPYSGIMSLQKGRDSKLAGA*WHVPVL
Trigger: CAAAACAGGCACATGCCACCATGCCCCAGCTAATTT...ACTGTCTCTTCCCTTCTGCAGAGACATTATGCCACTGTAAGGTGCATGTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp TTGTGTTATGAGAAAAGCTCTACATTTCTATTCCCACTATTACAGCTGTGTCTAGCTCCTAACCAGAGTTaGAGAGGCAGTGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: LCYEKSSTFLFPLLQLCLAPNQS*RGSGLG
Trigger: CCCGAGGCCACTGCCTCTGCAACTCTGGTTAGGAGC...TAGACACAGCTGTAATAGTGGGAATAGAAATGTAGAGCTTTTCTCATAACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp ATGAATGTTCCAGGGTTTCTGGTTAATTTAACATTAGATCCGTCCGTATTTTTCAGGCACGGCTCCAACTaGGAGTTCACCGAGCACAGC +
Preference number: 4 (lower is better)
Translates to: MNVPGFLVNLTLDPSVFFRHGSN*EFTEHS
Trigger: GCTGTGCTCGGTGAACTCGCAGTTGGAGCCGTGCCT...GAAAAATACGGACGGATCTAATGTTAAATTAACCAGAAACCCTGGAACATTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp GAACCAATGAACTTTGGATCTAATGTTATCCAACTGAGGAACCAAGTGCTTAAAACAGCACAGTCCACATaGCCGAAGGTTCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: EPMNFGSNVIQLRNQVLKTAQST*PKVPRG
Trigger: TCCCCGAGGAACCTTCGGGCATGTGGACTGTGCTGT...TTTAAGCACTTGGTTCCTCAGTTGGATAACATTAGATCCAAAGTTCATTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp TTGTGTTATGAGAAAAGCTCTACATTTCTATTCCCACTATTACAGCTGTGTCTACCAAGAGCTCCTGGATaGGCTTCCTGGCCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: LCYEKSSTFLFPLLQLCLPRAPG*ASWPAE
Trigger: TTCAGCGGGCCAGGAAGCGCATCCAGGAGCTCTTGG...TAGACACAGCTGTAATAGTGGGAATAGAAATGTAGAGCTTTTCTCATAACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp CACATAAAAAGTACGGGCGAGTTTGGAACTGGAAATGTGAGCATCTACAAGTACCCACCCCGCAAACTCTaGATCTCTTCCTTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: HIKSTGEFGTGNVSIYKYPPRKL*ISSFSA
Trigger: TGCACTAAAGGAAGAGATGCAGAGTTTGCGGGGTGG...GTACTTGTAGATGCTCACATTTCCAGTTCCAAACTCGCCCGTACTTTTTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp ATGGTTCTCAAAGCAGTCCCAATACAGCTCACAGTAGATCTCTGTCAACCCAGTTTGGAGAACAGGACTTaGTGCACCTTTTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: MVLKAVPIQLTVDLCQPSLENRT*CTFSSC
Trigger: GCAAGAAGAAAAGGTGCAGCAAGTCCTGTTCTCCAA...ACTGGGTTGACAGAGATCTACTGTGAGCTGTATTGGGACTGCTTTGAGAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp TCTGTACATGCACCTTACAGTGGCATAATGTCTCTGCAGAAGGGAAGAGACAGTGGCCCAAGTATGCTTTaGAACTTGACACACATTCTG +
Preference number: 4 (lower is better)
Translates to: SVHAPYSGIMSLQKGRDSGPSML*NLTHIL
Trigger: CAGAATGTGTGTCAAGTTGCAAAGCATACTTGGGCC...ACTGTCTCTTCCCTTCTGCAGAGACATTATGCCACTGTAAGGTGCATGTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp GTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTGGAAAGTTAGCTGTCTTCGTAGCATaGCAAGTTCTCTCATGTCTC +
Preference number: 4 (lower is better)
Translates to: VEVGTCTLRQGNGCVGKLAVFVA*QVLSCL
Trigger: GAGACATGAGAGAACTTGCCATGCTACGAAGACAGC...TAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp TTGTGTTATGAGAAAAGCTCTACATTTCTATTCCCACTATTACAGCTGTGTCTAGATCATCGGTCTCGGTaGAGAGCACCTGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LCYEKSSTFLFPLLQLCLDHRSR*RAPGRG
Trigger: TCCTCTCCCAGGTGCTCTTCACCGAGACCGATGATC...TAGACACAGCTGTAATAGTGGGAATAGAAATGTAGAGCTTTTCTCATAACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp ATGGTTCTCAAAGCAGTCCCAATACAGCTCACAGTAGATCTCTGTCAACCCAGTCACCCCTTTTCCATCTaGAATAAATCTTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: MVLKAVPIQLTVDLCQPSHPFSI*NKSCWS
Trigger: TGACCAGCAAGATTTATTTCAGATGGAAAAGGGGTG...ACTGGGTTGACAGAGATCTACTGTGAGCTGTATTGGGACTGCTTTGAGAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp AACAAAGGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATGCGTTCACATGGTCACCTaGGGCCGGATCTGTTTACAA +
Preference number: 4 (lower is better)
Translates to: NKGILPKFHSVHVKMVKCVHMVT*GRICLQ
Trigger: TTGTAAACAGATCCGGCCGCAGGTGACCATGTGAAC...GCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCCTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTAGAGTGTCGATTTCCTaGTCGGTCATCTCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: KLTVKWAVTLISKCPKLIRVSIS*SVISGA
Trigger: CGCCCCCGAGATGACCGAGCAGGAAATCGACACTCT...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp AGGCCAAGATCTGTCTTATGCAGAATTATATGTACAGGGTACTGCACACTGAGTCTTCTAAGAGCTTCATaGATGCTCCGTGTTAGAGGG +
Preference number: 4 (lower is better)
Translates to: RPRSVLCRIICTGYCTLSLLRAS*MLRVRG
Trigger: CCCTCTAACACGGAGCATCCATGAAGCTCTTAGAAG...ACTCAGTGTGCAGTACCCTGTACATATAATTCTGCATAAGACAGATCTTGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp AACAAAGGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATGCATCCATGAGGCTGAGTaGAGTTCTACACACCCTCCA +
Preference number: 4 (lower is better)
Translates to: NKGILPKFHSVHVKMVKCIHEAE*SSTHPP
Trigger: TGGAGGGTGTGTAGAACTCCACTCAGCCTCATGGAT...GCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCCTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTGCTTCAGATGTTTTCTaGCCCGGGATGGGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: KLTVKWAVTLISKCPKLIASDVF*PGMGLA
Trigger: GGCCAAACCCATCCCGGGTCAGAAAACATCTGAAGC...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp CAACTGAGGAACCAAGTGCTTAAACTGTCATTTTCCAAAAGAATCAGAACCAATGACAGTACAGCCATGTaGGCTTTCCGCTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: QLRNQVLKLSFSKRIRTNDSTAM*AFRCQS
Trigger: TGATTGGCAGCGGAAAGCTCACATGGCTGTACTGTC...ATTGGTTCTGATTCTTTTGGAAAATGACAGTTTAAGCACTTGGTTCCTCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp TCTGTACATGCACCTTACAGTGGCATAATGTCTCTGCAGAAGGGAAGAGACAGTTTACCAAATTTCTTCTaGTCAGCTCGCATTCGATCA +
Preference number: 4 (lower is better)
Translates to: SVHAPYSGIMSLQKGRDSLPNFF*SARIRS
Trigger: TGATCGAATGCGAGCTGATCAGAAGAAATTTGGTAA...ACTGTCTCTTCCCTTCTGCAGAGACATTATGCCACTGTAAGGTGCATGTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp AACAAAGGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATGCAGGTTATGGCAAACTTaGCCTCAATCTCGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: NKGILPKFHSVHVKMVKCRLWQT*PQSRSR
Trigger: CCTGGAACGAGATTGAGGGCAAGTTTGCCATAACCT...GCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCCTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp AGGCCAAGATCTGTCTTATGCAGAATTATATGTACAGGGTACTGCACACTGAGTGAAGTATCTTCAAGTTaGACAAGGCTCTGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: RPRSVLCRIICTGYCTLSEVSSS*TRLWGS
Trigger: AGAACCCCAGAGCCTTGTGCAACTTGAAGATACTTC...ACTCAGTGTGCAGTACCCTGTACATATAATTCTGCATAAGACAGATCTTGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp TCTGTACATGCACCTTACAGTGGCATAATGTCTCTGCAGAAGGGAAGAGACAGTATCTATTGGAACGACTaGAAAGTGATAACCTGCCAA +
Preference number: 4 (lower is better)
Translates to: SVHAPYSGIMSLQKGRDSIYWND*KVITCQ
Trigger: TTGGCAGGTTATCACTTTCCAGTCGTTCCAATAGAT...ACTGTCTCTTCCCTTCTGCAGAGACATTATGCCACTGTAAGGTGCATGTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp GAACCAATGAACTTTGGATCTAATGTTATCCAACTGAGGAACCAAGTGCTTAAAGCTTCATCCTCCATCTaGTACAAGTCCAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: EPMNFGSNVIQLRNQVLKASSSI*YKSRSS
Trigger: GGAGCTTCTGGACTTGTATCAGATGGAGGATGAAGC...TTTAAGCACTTGGTTCCTCAGTTGGATAACATTAGATCCAAAGTTCATTGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp AGGCCAAGATCTGTCTTATGCAGAATTATATGTACAGGGTACTGCACACTGAGTTTGACACACATTCTGTaGTATAAAGTGGCCATGCCA +
Preference number: 4 (lower is better)
Translates to: RPRSVLCRIICTGYCTLSLTHIL*YKVAMP
Trigger: TGGCATGGCCACTTTATATCACAGAATGTGTGTCAA...ACTCAGTGTGCAGTACCCTGTACATATAATTCTGCATAAGACAGATCTTGGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp ATGGTTCTCAAAGCAGTCCCAATACAGCTCACAGTAGATCTCTGTCAACCCAGTGTATGCTTTGCAACTTaGCACACATTCTGTGATATA +
Preference number: 4 (lower is better)
Translates to: MVLKAVPIQLTVDLCQPSVCFAT*HTFCDI
Trigger: TATATCACAGAATGTGTGTCAAGTTGCAAAGCATAC...ACTGGGTTGACAGAGATCTACTGTGAGCTGTATTGGGACTGCTTTGAGAACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp TCTGTACATGCACCTTACAGTGGCATAATGTCTCTGCAGAAGGGAAGAGACAGTTTGATGCTTTCTAGTTaGGCTGTCAATAGTAACTCT +
Preference number: 4 (lower is better)
Translates to: SVHAPYSGIMSLQKGRDSLMLSS*AVNSNS
Trigger: AGAGTTACTATTGACAGCGCAACTAGAAAGCATCAA...ACTGTCTCTTCCCTTCTGCAGAGACATTATGCCACTGTAAGGTGCATGTACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp AACAAAGGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATGCTATACACTGGGCTTTTaGTCCAGTACTGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: NKGILPKFHSVHVKMVKCYTLGF*SSTAFW
Trigger: CCAGAAAGCAGTACTGGAGCAAAAGCCCAGTGTATA...GCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCCTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp CACATAAAAAGTACGGGCGAGTTTGGAACTGGAAATGTGAGCATCTACAAGTACGTAGAAGTAGGAACCTaGACCTTAAGGCAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: HIKSTGEFGTGNVSIYKYVEVGT*TLRQGN
Trigger: ATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC...GTACTTGTAGATGCTCACATTTCCAGTTCCAAACTCGCCCGTACTTTTTATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp AGGCCAAGATCTGTCTTATGCAGAATTATATGTACAGGGTACTGCACACTGAGTAAGAGGGGATGGGAGTaGATTTATGGTAACAGAACA +
Preference number: 4 (lower is better)
Translates to: RPRSVLCRIICTGYCTLSKRGWE*IYGNRT
Trigger: TGTTCTGTTACCATAAATCCACTCCCATCCCCTCTT...ACTCAGTGTGCAGTACCCTGTACATATAATTCTGCATAAGACAGATCTTGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp CAACTGAGGAACCAAGTGCTTAAACTGTCATTTTCCAAAAGAATCAGAACCAATTTTCTCCAGTGTCTCTaGGCCACTGTCCTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: QLRNQVLKLSFSKRIRTNFLQCL*ATVLSN
Trigger: GTTGCTAAGGACAGTGGCCCAGAGACACTGGAGAAA...ATTGGTTCTGATTCTTTTGGAAAATGACAGTTTAAGCACTTGGTTCCTCAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp CACATAAAAAGTACGGGCGAGTTTGGAACTGGAAATGTGAGCATCTACAAGTACTCAACCTTTTTCAGATaGAAACTACCACGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: HIKSTGEFGTGNVSIYKYSTFFR*KLPRFK
Trigger: CTTGAAGCGTGGTAGTTTTCATCTGAAAAAGGTTGA...GTACTTGTAGATGCTCACATTTCCAGTTCCAAACTCGCCCGTACTTTTTATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp AGGCCAAGATCTGTCTTATGCAGAATTATATGTACAGGGTACTGCACACTGAGTCTAATGTTATCCAACTaGGGAACCAAGTGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: RPRSVLCRIICTGYCTLSLMLSN*GTKCLN
Trigger: GTTTAAGCACTTGGTTCCTCAGTTGGATAACATTAG...ACTCAGTGTGCAGTACCCTGTACATATAATTCTGCATAAGACAGATCTTGGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp GTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTGGAAAGTTAAAAGCAATTAAGCAGTaGCCCTTCTTAATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: VEVGTCTLRQGNGCVGKLKAIKQ*PFLMCF
Trigger: AAAGCACATTAAGAAGGGTCACTGCTTAATTGCTTT...TAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTTTCGGTTGTAGCTTCTaGAAGGCTGCTGTAGGCTTC +
Preference number: 4 (lower is better)
Translates to: KLTVKWAVTLISKCPKLIFGCSF*KAAVGF
Trigger: GAAGCCTACAGCAGCCTTGCAGAAGCTACAACCGAA...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp GTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTGGAAAGTTACCAAGATCTGTCTTATaGAGAATTATATGTACAGGG +
Preference number: 4 (lower is better)
Translates to: VEVGTCTLRQGNGCVGKLPRSVL*RIICTG
Trigger: CCCTGTACATATAATTCTGCATAAGACAGATCTTGG...TAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp GTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTGGAAAGTTATTAGAAACTGCATACTaGAGTTTTTCCATCCGTTCA +
Preference number: 4 (lower is better)
Translates to: VEVGTCTLRQGNGCVGKLLETAY*SFSIRS
Trigger: TGAACGGATGGAAAAACTCCAGTATGCAGTTTCTAA...TAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp TTGTGTTATGAGAAAAGCTCTACATTTCTATTCCCACTATTACAGCTGTGTCTACTTCCTTCTCCAGCATaGCCTCCATGCTTTCGTAAG +
Preference number: 4 (lower is better)
Translates to: LCYEKSSTFLFPLLQLCLLPSPA*PPCFRK
Trigger: CTTACGAAAGCATGGAGGCCATGCTGGAGAAGGAAG...TAGACACAGCTGTAATAGTGGGAATAGAAATGTAGAGCTTTTCTCATAACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp CAACTGAGGAACCAAGTGCTTAAACTGTCATTTTCCAAAAGAATCAGAACCAATAGTTGCACAAGGCTCTaGGGTTCTGTTGTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: QLRNQVLKLSFSKRIRTNSCTRL*GSVVCD
Trigger: ATCACAGACAACAGAACCCCAGAGCCTTGTGCAACT...ATTGGTTCTGATTCTTTTGGAAAATGACAGTTTAAGCACTTGGTTCCTCAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp ATGGTTCTCAAAGCAGTCCCAATACAGCTCACAGTAGATCTCTGTCAACCCAGTTATGGTAACAGAACATaGTTCGAGGTTGTTATTCAA +
Preference number: 4 (lower is better)
Translates to: MVLKAVPIQLTVDLCQPSYGNRT*FEVVIQ
Trigger: TTGAATAACAACCTCGAACCATGTTCTGTTACCATA...ACTGGGTTGACAGAGATCTACTGTGAGCTGTATTGGGACTGCTTTGAGAACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp AGGCCAAGATCTGTCTTATGCAGAATTATATGTACAGGGTACTGCACACTGAGTAGAACTGTAACAGGATaGGTTGAGAGACTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: RPRSVLCRIICTGYCTLSRTVTG*VERLVD
Trigger: ATCTACAAGTCTCTCAACCCATCCTGTTACAGTTCT...ACTCAGTGTGCAGTACCCTGTACATATAATTCTGCATAAGACAGATCTTGGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp GTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTGGAAAGTTACTTAAGGCAAGGAAATaGGTGTGTTGGAAAGTTATT +
Preference number: 4 (lower is better)
Translates to: VEVGTCTLRQGNGCVGKLLKARK*VCWKVI
Trigger: AATAACTTTCCAACACACCCATTTCCTTGCCTTAAG...TAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp ATACTGATCCCATTCCAAACAGAGAGAATGCTGCCCATTAGTTTTTGTTTCACTAAGTACGGGCGAGTTTaGAACTGGAAATGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: ILIPFQTERMLPISFCFTKYGRV*NWKCEH
Trigger: ATGCTCACATTTCCAGTTCCAAACTCGCCCGTACTT...AGTGAAACAAAAACTAATGGGCAGCATTCTCTCTGTTTGGAATGGGATCAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp TCTGTACATGCACCTTACAGTGGCATAATGTCTCTGCAGAAGGGAAGAGACAGTGCAAACAGCGGTTTGTaGATACAGAAATCATATATT +
Preference number: 4 (lower is better)
Translates to: SVHAPYSGIMSLQKGRDSANSGL*IQKSYI
Trigger: AATATATGATTTCTGTATCCACAAACCGCTGTTTGC...ACTGTCTCTTCCCTTCTGCAGAGACATTATGCCACTGTAAGGTGCATGTACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp ATGGTTCTCAAAGCAGTCCCAATACAGCTCACAGTAGATCTCTGTCAACCCAGTAGTCAAAACGATTACTaGAGATTTCATGGTATTGCT +
Preference number: 4 (lower is better)
Translates to: MVLKAVPIQLTVDLCQPSSQNDY*RFHGIA
Trigger: AGCAATACCATGAAATCTCCAGTAATCGTTTTGACT...ACTGGGTTGACAGAGATCTACTGTGAGCTGTATTGGGACTGCTTTGAGAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp TTGTGTTATGAGAAAAGCTCTACATTTCTATTCCCACTATTACAGCTGTGTCTAAGCAGCCGCTGCCCATaGTGCTTTACCAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: LCYEKSSTFLFPLLQLCLSSRCP*CFTKFL
Trigger: AAGAAATTTGGTAAAGCATCATGGGCAGCGGCTGCT...TAGACACAGCTGTAATAGTGGGAATAGAAATGTAGAGCTTTTCTCATAACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp CAACTGAGGAACCAAGTGCTTAAACTGTCATTTTCCAAAAGAATCAGAACCAATTTCCCTCTCAAGATATaGATGTTCCAGGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: QLRNQVLKLSFSKRIRTNFPLKI*MFQGFW
Trigger: CCAGAAACCCTGGAACATTCATATCTTGAGAGGGAA...ATTGGTTCTGATTCTTTTGGAAAATGACAGTTTAAGCACTTGGTTCCTCAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp GAACCAATGAACTTTGGATCTAATGTTATCCAACTGAGGAACCAAGTGCTTAAATTTCCAAGTGTGAGGTaGCTCTCATGGAGAACTGTA +
Preference number: 4 (lower is better)
Translates to: EPMNFGSNVIQLRNQVLKFPSVR*LSWRTV
Trigger: TACAGTTCTCCATGAGAGTCACCTCACACTTGGAAA...TTTAAGCACTTGGTTCCTCAGTTGGATAACATTAGATCCAAAGTTCATTGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp CAACTGAGGAACCAAGTGCTTAAACTGTCATTTTCCAAAAGAATCAGAACCAATCTTCTTTTCCAAGTGTaGGGTGACTCTCATGGAGAA +
Preference number: 4 (lower is better)
Translates to: QLRNQVLKLSFSKRIRTNLLFQV*GDSHGE
Trigger: TTCTCCATGAGAGTCACCTCACACTTGGAAAAGAAG...ATTGGTTCTGATTCTTTTGGAAAATGACAGTTTAAGCACTTGGTTCCTCAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp GAACCAATGAACTTTGGATCTAATGTTATCCAACTGAGGAACCAAGTGCTTAAAGAGAACAGGACTTGCTaGACCTTTTCTTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: EPMNFGSNVIQLRNQVLKENRTC*TFSSCM
Trigger: CATGCAAGAAGAAAAGGTGCAGCAAGTCCTGTTCTC...TTTAAGCACTTGGTTCCTCAGTTGGATAACATTAGATCCAAAGTTCATTGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTAGTTCTCCCAGTCTGTaGAAGGTAAAGCCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: KLTVKWAVTLISKCPKLISSPSL*KVKPPL
Trigger: AAGAGGAGGCTTTACCTTGCACAGACTGGGAGAACT...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp ATACTGATCCCATTCCAAACAGAGAGAATGCTGCCCATTAGTTTTTGTTTCACTATAACCTGCCAATTGTaGTTCCTTTCTTCACACCAC +
Preference number: 4 (lower is better)
Translates to: ILIPFQTERMLPISFCFTITCQL*FLSSHH
Trigger: GTGGTGTGAAGAAAGGAAGCACAATTGGCAGGTTAT...AGTGAAACAAAAACTAATGGGCAGCATTCTCTCTGTTTGGAATGGGATCAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp CACATAAAAAGTACGGGCGAGTTTGGAACTGGAAATGTGAGCATCTACAAGTACCAGATGACTTTTCAGTaGATTGAAAGATGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: HIKSTGEFGTGNVSIYKYQMTFQ*IERWFS
Trigger: TGAGAACCATCTTTCAATGCACTGAAAAGTCATCTG...GTACTTGTAGATGCTCACATTTCCAGTTCCAAACTCGCCCGTACTTTTTATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp ATGAATGTTCCAGGGTTTCTGGTTAATTTAACATTAGATCCGTCCGTATTTTTCGCTCTAACAGTAAGGTaGTTCCACTTTCTCACCCCT +
Preference number: 4 (lower is better)
Translates to: MNVPGFLVNLTLDPSVFFALTVR*FHFLTP
Trigger: AGGGGTGAGAAAGTGGAAGCACCTTACTGTTAGAGC...GAAAAATACGGACGGATCTAATGTTAAATTAACCAGAAACCCTGGAACATTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp TTGTGTTATGAGAAAAGCTCTACATTTCTATTCCCACTATTACAGCTGTGTCTATGGAGGAAGAGGGGATaGGAGTGGATTTATGGTAAC +
Preference number: 4 (lower is better)
Translates to: LCYEKSSTFLFPLLQLCLWRKRG*EWIYGN
Trigger: GTTACCATAAATCCACTCCCATCCCCTCTTCCTCCA...TAGACACAGCTGTAATAGTGGGAATAGAAATGTAGAGCTTTTCTCATAACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp AGGCCAAGATCTGTCTTATGCAGAATTATATGTACAGGGTACTGCACACTGAGTGATGTGGGAATAGTGTaGGAACTAAAACCAATGTAT +
Preference number: 4 (lower is better)
Translates to: RPRSVLCRIICTGYCTLSDVGIV*ELKPMY
Trigger: ATACATTGGTTTTAGTTCCCACACTATTCCCACATC...ACTCAGTGTGCAGTACCCTGTACATATAATTCTGCATAAGACAGATCTTGGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp CACATAAAAAGTACGGGCGAGTTTGGAACTGGAAATGTGAGCATCTACAAGTACCAGCACCCAAAGAACTaGATATATGAAATGTTGACA +
Preference number: 4 (lower is better)
Translates to: HIKSTGEFGTGNVSIYKYQHPKN*IYEMLT
Trigger: TGTCAACATTTCATATATCCAGTTCTTTGGGTGCTG...GTACTTGTAGATGCTCACATTTCCAGTTCCAAACTCGCCCGTACTTTTTATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp GAACCAATGAACTTTGGATCTAATGTTATCCAACTGAGGAACCAAGTGCTTAAAGGGCGAGTTTGGAACTaGAAATGTGAGCATCTACAA +
Preference number: 4 (lower is better)
Translates to: EPMNFGSNVIQLRNQVLKGRVWN*KCEHLQ
Trigger: TTGTAGATGCTCACATTTCCAGTTCCAAACTCGCCC...TTTAAGCACTTGGTTCCTCAGTTGGATAACATTAGATCCAAAGTTCATTGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp AGGCCAAGATCTGTCTTATGCAGAATTATATGTACAGGGTACTGCACACTGAGTTTCTGTGATATAAAGTaGCCATGCCATATGTTACCA +
Preference number: 4 (lower is better)
Translates to: RPRSVLCRIICTGYCTLSFCDIK*PCHMLP
Trigger: TGGTAACATATGGCATGGCCACTTTATATCACAGAA...ACTCAGTGTGCAGTACCCTGTACATATAATTCTGCATAAGACAGATCTTGGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp CAACTGAGGAACCAAGTGCTTAAACTGTCATTTTCCAAAAGAATCAGAACCAATCCTTTTCTTCTTGCATaGGCTAGTCGTAATCTGGTT +
Preference number: 4 (lower is better)
Translates to: QLRNQVLKLSFSKRIRTNPFLLA*ASRNLV
Trigger: AACCAGATTACGACTAGCTCATGCAAGAAGAAAAGG...ATTGGTTCTGATTCTTTTGGAAAATGACAGTTTAAGCACTTGGTTCCTCAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp GAACCAATGAACTTTGGATCTAATGTTATCCAACTGAGGAACCAAGTGCTTAAACTTTCTTCACACCACTaGACCAATGAACTTTGGATC +
Preference number: 4 (lower is better)
Translates to: EPMNFGSNVIQLRNQVLKLSSHH*TNELWI
Trigger: GATCCAAAGTTCATTGGTTCAGTGGTGTGAAGAAAG...TTTAAGCACTTGGTTCCTCAGTTGGATAACATTAGATCCAAAGTTCATTGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp GAACCAATGAACTTTGGATCTAATGTTATCCAACTGAGGAACCAAGTGCTTAAAATGGAAATCTTGATCTaGTGTCTTCGTAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: EPMNFGSNVIQLRNQVLKMEILI*CLRSMA
Trigger: TGCCATGCTACGAAGACAGCAGATCAAGATTTCCAT...TTTAAGCACTTGGTTCCTCAGTTGGATAACATTAGATCCAAAGTTCATTGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp GAACCAATGAACTTTGGATCTAATGTTATCCAACTGAGGAACCAAGTGCTTAAAATATGTACAGGGTACTaGACACTGAGTCCAATGATC +
Preference number: 4 (lower is better)
Translates to: EPMNFGSNVIQLRNQVLKICTGY*TLSPMI
Trigger: GATCATTGGACTCAGTGTGCAGTACCCTGTACATAT...TTTAAGCACTTGGTTCCTCAGTTGGATAACATTAGATCCAAAGTTCATTGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp TTGTGTTATGAGAAAAGCTCTACATTTCTATTCCCACTATTACAGCTGTGTCTATGTAACAGGATGGGTTaGGAGACTTGTAGATGTATC +
Preference number: 4 (lower is better)
Translates to: LCYEKSSTFLFPLLQLCLCNRMG*ETCRCI
Trigger: GATACATCTACAAGTCTCTCAACCCATCCTGTTACA...TAGACACAGCTGTAATAGTGGGAATAGAAATGTAGAGCTTTTCTCATAACACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTTTGGAACTGGAAATGTaGGCATCTACAAGTACCATC +
Preference number: 4 (lower is better)
Translates to: KLTVKWAVTLISKCPKLILELEM*ASTSTI
Trigger: GATGGTACTTGTAGATGCTCACATTTCCAGTTCCAA...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp ATGAATGTTCCAGGGTTTCTGGTTAATTTAACATTAGATCCGTCCGTATTTTTCGGGCATGGTGGCATGTaGCTGTTTTGTTTTGAAATA +
Preference number: 4 (lower is better)
Translates to: MNVPGFLVNLTLDPSVFFGHGGM*LFCFEI
Trigger: TATTTCAAAACAAAACAGGCACATGCCACCATGCCC...GAAAAATACGGACGGATCTAATGTTAAATTAACCAGAAACCCTGGAACATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp ATGAATGTTCCAGGGTTTCTGGTTAATTTAACATTAGATCCGTCCGTATTTTTCACATGCACCTTACAGTaGCATAATGTCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: MNVPGFLVNLTLDPSVFFTCTLQ*HNVSAE
Trigger: TTCTGCAGAGACATTATGCCACTGTAAGGTGCATGT...GAAAAATACGGACGGATCTAATGTTAAATTAACCAGAAACCCTGGAACATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp AACAAAGGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATGCAGTATTGGGAAAAGCTaGAATAATTTGTTACACCCT +
Preference number: 4 (lower is better)
Translates to: NKGILPKFHSVHVKMVKCSIGKS*NNLLHP
Trigger: AGGGTGTAACAAATTATTCCAGCTTTTCCCAATACT...GCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCCTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR CAA 72 bp CATTGCACATGTAAAATTCATGTTAACCATCATCTATaGGAACGACTGGAAAGTGATAACCTGCCAATTGTG +
Preference number: 4 (lower is better)
Translates to: HCTCKIHVNHHL*ERLESDNLPIV
Trigger: CACAATTGGCAGGTTATCACTTTCCAGTCGTTCCAATAGATGATGGTTAACATGAATTTTACATGTGCAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR CAA 72 bp TTGCAGTTGAGACTAGATTGGAAATTAACTTCTAAATaGACTCAGCATAAGCAAACAGCGGTTTGTGGATAC +
Preference number: 4 (lower is better)
Translates to: LQLRLDWKLTSK*TQHKQTAVCGY
Trigger: GTATCCACAAACCGCTGTTTGCTTATGCTGAGTCAATTTAGAAGTTAATTTCCAATCTAGTCTCAACTGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTTATCGGGTAGAAGTGTaGAGGATTCTCTCAAAACAT +
Preference number: 4 (lower is better)
Translates to: KLTVKWAVTLISKCPKLIYRVEV*RILSKH
Trigger: ATGTTTTGAGAGAATCCTTCACACTTCTACCCGATA...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp CAACTGAGGAACCAAGTGCTTAAACTGTCATTTTCCAAAAGAATCAGAACCAATACACCACTGAACCAATaGACTTTGGATCTAATGTTA +
Preference number: 4 (lower is better)
Translates to: QLRNQVLKLSFSKRIRTNTPLNQ*TLDLML
Trigger: TAACATTAGATCCAAAGTTCATTGGTTCAGTGGTGT...ATTGGTTCTGATTCTTTTGGAAAATGACAGTTTAAGCACTTGGTTCCTCAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp CAACTGAGGAACCAAGTGCTTAAACTGTCATTTTCCAAAAGAATCAGAACCAATAAAACCAATGTATTATaGAGATGCTGCAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: QLRNQVLKLSFSKRIRTNKTNVL*RCCREA
Trigger: AGCTTCTCTGCAGCATCTTCATAATACATTGGTTTT...ATTGGTTCTGATTCTTTTGGAAAATGACAGTTTAAGCACTTGGTTCCTCAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTTTTGCTAGAGACTTATaGTTACAGCACACTCTGGAA +
Preference number: 4 (lower is better)
Translates to: KLTVKWAVTLISKCPKLIFARDL*LQHTLE
Trigger: TTCCAGAGTGTGCTGTAATCATAAGTCTCTAGCAAA...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTTGTCTGCAATGGTTTTaGAATGTCTTACAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: KLTVKWAVTLISKCPKLICLQWF*NVLQLF
Trigger: GAACAGCTGTAAGACATTTCAAAACCATTGCAGACA...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp GAACCAATGAACTTTGGATCTAATGTTATCCAACTGAGGAACCAAGTGCTTAAAGATTTAAGTATGACTTaGCCAGGATACCTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: EPMNFGSNVIQLRNQVLKDLSMT*PGYLCL
Trigger: TAAACAGAGGTATCCTGGGCAAGTCATACTTAAATC...TTTAAGCACTTGGTTCCTCAGTTGGATAACATTAGATCCAAAGTTCATTGGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR TCA 90 bp ATGAATGTTCCAGGGTTTCTGGTTAATTTAACATTAGATCCGTCCGTATTTTTCCCACAACAATCCTGCTaGAAATCTGGAACATATAAA +
Preference number: 4 (lower is better)
Translates to: MNVPGFLVNLTLDPSVFFPQQSC*KSGTYK
Trigger: TTTATATGTTCCAGATTTTCAGCAGGATTGTTGTGG...GAAAAATACGGACGGATCTAATGTTAAATTAACCAGAAACCCTGGAACATTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp CAACTGAGGAACCAAGTGCTTAAACTGTCATTTTCCAAAAGAATCAGAACCAATTCTTACATAACCTGTTaGCAGAAAATTTTCTCCCTA +
Preference number: 4 (lower is better)
Translates to: QLRNQVLKLSFSKRIRTNSYITC*QKIFSL
Trigger: TAGGGAGAAAATTTTCTGGCAACAGGTTATGTAAGA...ATTGGTTCTGATTCTTTTGGAAAATGACAGTTTAAGCACTTGGTTCCTCAGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTTCCAAACAGAGAGAATaGTGCCCATTAGTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: KLTVKWAVTLISKCPKLISKQRE*CPLVFV
Trigger: AACAAAAACTAATGGGCAGCATTCTCTCTGTTTGGA...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp TTGTGTTATGAGAAAAGCTCTACATTTCTATTCCCACTATTACAGCTGTGTCTAGTTGTTATTCAAAAGTaGAAGAGATATAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LCYEKSSTFLFPLLQLCLVVIQK*KRYSGR
Trigger: CCTCCCACTATATCTCTTCCACTTTTGAATAACAAC...TAGACACAGCTGTAATAGTGGGAATAGAAATGTAGAGCTTTTCTCATAACACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp GAACCAATGAACTTTGGATCTAATGTTATCCAACTGAGGAACCAAGTGCTTAAATTAACCATCATCTATTaGAACGACTGGAAAGTGATA +
Preference number: 4 (lower is better)
Translates to: EPMNFGSNVIQLRNQVLKLTIIY*NDWKVI
Trigger: TATCACTTTCCAGTCGTTCCAATAGATGATGGTTAA...TTTAAGCACTTGGTTCCTCAGTTGGATAACATTAGATCCAAAGTTCATTGGTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp ATGAATGTTCCAGGGTTTCTGGTTAATTTAACATTAGATCCGTCCGTATTTTTCATCATTTACCCCTCTTaGTTCACAAATGAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: MNVPGFLVNLTLDPSVFFIIYPS*FTNEGK
Trigger: TTTCCCTTCATTTGTGAACCAAGAGGGGTAAATGAT...GAAAAATACGGACGGATCTAATGTTAAATTAACCAGAAACCCTGGAACATTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
3UTR CAA 72 bp TACATTGGTTATAATTTTGGTTGCATTAGGAGCCATTaGAAATTGACAGTCAAGTGGGCAGTAACATTAATC +
Preference number: 4 (lower is better)
Translates to: YIGYNFGCIRSH*KLTVKWAVTLI
Trigger: GATTAATGTTACTGCCCACTTGACTGTCAATTTCAAATGGCTCCTAATGCAACCAAAATTATAACCAATGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp TTGTGTTATGAGAAAAGCTCTACATTTCTATTCCCACTATTACAGCTGTGTCTAAGTTTCCTTAGAAACTaGATACTGGAGTTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LCYEKSSTFLFPLLQLCLSFLRN*ILEFFH
Trigger: ATGGAAAAACTCCAGTATGCAGTTTCTAAGGAAACT...TAGACACAGCTGTAATAGTGGGAATAGAAATGTAGAGCTTTTCTCATAACACAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR GCA 90 bp ATGAATGTTCCAGGGTTTCTGGTTAATTTAACATTAGATCCGTCCGTATTTTTCATGTATCTCCATAAATaGAGCTTTTCAGATGTTGCT +
Preference number: 4 (lower is better)
Translates to: MNVPGFLVNLTLDPSVFFMYLHK*SFSDVA
Trigger: AGCAACATCTGAAAAGCTGCATTTATGGAGATACAT...GAAAAATACGGACGGATCTAATGTTAAATTAACCAGAAACCCTGGAACATTCAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CCA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTGTTGTACATTTACTGTaGGCAAAACGTAGAAAACTT +
Preference number: 4 (lower is better)
Translates to: KLTVKWAVTLISKCPKLIVVHLL*AKRRKL
Trigger: AAGTTTTCTACGTTTTGCCCACAGTAAATGTACAAC...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS GCA 90 bp TGCTGCCAGGACTCCGCAGCCGCGGGTCCCCCAGAAGGCTGCGAGTaGTCCGAGGAGAGCCGCCCTCCGCCCAGGCCGAGCTCCGCCGGG +
Preference number: 5 (lower is better)
Translates to: CCQDSAAAGPPEGCE*SEESRPPPRPSSAG
Trigger: CCCGGCGGAGCTCGGCCTGGGCGGAGGGCGGCTCTCCTCGGAGCACTCGCAGCCTTCTGGGGGACCCGCGGCTGCGGAGTCCTGGCAGCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS GCA 90 bp CCCCTTTGCTGCCAGGACTCCGCAGCCGCGGGTCCCCCAGAAGGCTaGGAGTGCTCCGAGGAGAGCCGCCCTCCGCCCAGGCCGAGCTCC +
Preference number: 5 (lower is better)
Translates to: PLCCQDSAAAGPPEG*ECSEESRPPPRPSS
Trigger: GGAGCTCGGCCTGGGCGGAGGGCGGCTCTCCTCGGAGCACTCGCAGCCTTCTGGGGGACCCGCGGCTGCGGAGTCCTGGCAGCAAAGGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 90 bp ACAGTCCGGCCCAGCTGCACTCTTCGGCCGGAGACTCCAGCTCGGTaGCGGGCGGCGGCTGCTCCGCGTCCGAGAGCGCCAGAGGTGCCT +
Preference number: 5 (lower is better)
Translates to: TVRPSCTLRPETPAR*RAAAAPRPRAPEVP
Trigger: AGGCACCTCTGGCGCTCTCGGACGCGGAGCAGCCGCCGCCCGCCACCGAGCTGGAGTCTCCGGCCGAAGAGTGCAGCTGGGCCGGACTGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS GCA 90 bp CTGCACTCTTCGGCCGGAGACTCCAGCTCGGTGGCGGGCGGCGGCTaGTCCGCGTCCGAGAGCGCCAGAGGTGCCTCGTCCTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: LHSSAGDSSSVAGGG*SASESARGASSSFT
Trigger: GGTGAAGGAGGACGAGGCACCTCTGGCGCTCTCGGACGCGGAGCAGCCGCCGCCCGCCACCGAGCTGGAGTCTCCGGCCGAAGAGTGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 90 bp TCCCAGAGGCGCTCACTATCCGTACAGAGGACACCTGGGCCTCTCTaGGCGCCGGCCGGGCTGCTGCAGCGGCTGCCCCCGCCGCATCGT +
Preference number: 5 (lower is better)
Translates to: SQRRSLSVQRTPGPL*APAGLLQRLPPPHR
Trigger: ACGATGCGGCGGGGGCAGCCGCTGCAGCAGCCCGGCCGGCGCCCAGAGAGGCCCAGGTGTCCTCTGTACGGATAGTGAGCGCCTCTGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS GCA 90 bp GGACACCTGGGCCTCTCTGGGCGCCGGCCGGGCTGCTGCAGCGGCTaGCCCCGCCGCATCGTCGGCTTCAGATGTTTTCTGACCCGGGAT +
Preference number: 5 (lower is better)
Translates to: GHLGLSGRRPGCCSG*PRRIVGFRCFLTRD
Trigger: ATCCCGGGTCAGAAAACATCTGAAGCCGACGATGCGGCGGGGGCAGCCGCTGCAGCAGCCCGGCCGGCGCCCAGAGAGGCCCAGGTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS GCA 90 bp CCGTACAGAGGACACCTGGGCCTCTCTGGGCGCCGGCCGGGCTGCTaGAGCGGCTGCCCCCGCCGCATCGTCGGCTTCAGATGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: PYRGHLGLSGRRPGC*SGCPRRIVGFRCFL
Trigger: CAGAAAACATCTGAAGCCGACGATGCGGCGGGGGCAGCCGCTGCAGCAGCCCGGCCGGCGCCCAGAGAGGCCCAGGTGTCCTCTGTACGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 90 bp CCCCCTCGCGCCCCCGCTTGCTCCCGGGAGCCGCTCCTCTGCCTCTaGGCCGTCCGGTTGTGGCAGGTTATGGCAAACTTGCCCTCAATC +
Preference number: 5 (lower is better)
Translates to: PPRAPACSREPLLCL*AVRLWQVMANLPSI
Trigger: GATTGAGGGCAAGTTTGCCATAACCTGCCACAACCGGACGGCCCAGAGGCAGAGGAGCGGCTCCCGGGAGCAAGCGGGGGCGCGAGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS TCA 90 bp CCCGCCCCCGCCCCTGGTGCTGCTGCAGAAAGCCCGGAGCCGGCCTaGCTGATGAACCCGTCTCCTAAACTCTGCGCCTCAGCATCGCCA +
Preference number: 5 (lower is better)
Translates to: PAPAPGAAAESPEPA*LMNPSPKLCASASP
Trigger: TGGCGATGCTGAGGCGCAGAGTTTAGGAGACGGGTTCATCAGTCAGGCCGGCTCCGGGCTTTCTGCAGCAGCACCAGGGGCGGGGGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS GCA 90 bp TATCCGTACAGAGGACACCTGGGCCTCTCTGGGCGCCGGCCGGGCTaGTGCAGCGGCTGCCCCCGCCGCATCGTCGGCTTCAGATGTTTT +
Preference number: 5 (lower is better)
Translates to: YPYRGHLGLSGRRPG*CSGCPRRIVGFRCF
Trigger: AAAACATCTGAAGCCGACGATGCGGCGGGGGCAGCCGCTGCAGCAGCCCGGCCGGCGCCCAGAGAGGCCCAGGTGTCCTCTGTACGGATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS GCA 90 bp ATGCCCGAAGGTTCCTCGGGGAACACCGGCAGGCACGGCTCCAACTaGGAGTTCACCGAGCACAGCTGCTGGTGCACGGCGCGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: MPEGSSGNTGRHGSN*EFTEHSCWCTARRS
Trigger: GGACCTGCGCGCCGTGCACCAGCAGCTGTGCTCGGTGAACTCGCAGTTGGAGCCGTGCCTGCCGGTGTTCCCCGAGGAACCTTCGGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS TCA 90 bp GCTGCAGCGGCTGCCCCCGCCGCATCGTCGGCTTCAGATGTTTTCTaGCCCGGGATGGGTTTGGCCCGCACTGGGCTCCTAAGACGACTC +
Preference number: 5 (lower is better)
Translates to: AAAAAPAASSASDVF*PGMGLARTGLLRRL
Trigger: GAGTCGTCTTAGGAGCCCAGTGCGGGCCAAACCCATCCCGGGTCAGAAAACATCTGAAGCCGACGATGCGGCGGGGGCAGCCGCTGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 90 bp TGCGAGTTCACCGAGCACAGCTGCTGGTGCACGGCGCGCAGGTCCTaGAAAGAAAACAGTCCGGCCCAGCTGCACTCTTCGGCCGGAGAC +
Preference number: 5 (lower is better)
Translates to: CEFTEHSCWCTARRS*KENSPAQLHSSAGD
Trigger: GTCTCCGGCCGAAGAGTGCAGCTGGGCCGGACTGTTTTCTTTCCAGGACCTGCGCGCCGTGCACCAGCAGCTGTGCTCGGTGAACTCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 90 bp GCTTGCTCCCGGGAGCCGCTCCTCTGCCTCTGGGCCGTCCGGTTGTaGCAGGTTATGGCAAACTTGCCCTCAATCTCGTTCCAGGCCACA +
Preference number: 5 (lower is better)
Translates to: ACSREPLLCLWAVRL*QVMANLPSISFQAT
Trigger: TGTGGCCTGGAACGAGATTGAGGGCAAGTTTGCCATAACCTGCCACAACCGGACGGCCCAGAGGCAGAGGAGCGGCTCCCGGGAGCAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 90 bp GTCGGCTTCAGATGTTTTCTGACCCGGGATGGGTTTGGCCCGCACTaGGCTCCTAAGACGACTCTCCGCCCCTTTGCTGCCAGGACTCCG +
Preference number: 5 (lower is better)
Translates to: VGFRCFLTRDGFGPH*APKTTLRPFAARTP
Trigger: CGGAGTCCTGGCAGCAAAGGGGCGGAGAGTCGTCTTAGGAGCCCAGTGCGGGCCAAACCCATCCCGGGTCAGAAAACATCTGAAGCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 90 bp GCCACAATAAAGACGAATTTGTGTTTCTCGCGCTCGTCGAACACATaGGGCCGCACAGCCACCCAGTCCGACTCGAGCGTCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: ATIKTNLCFSRSSNT*GRTATQSDSSVSSS
Trigger: GCTGGAGGAGACGCTCGAGTCGGACTGGGTGGCTGTGCGGCCCCATGTGTTCGACGAGCGCGAGAAACACAAATTCGTCTTTATTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 90 bp CTTCTCATTCCCCTCCTTTCTAGGCAGATCTTTCTCCAGTGTCTCTaGGCCACTGTCCTTAGCAACAGGCAGAGGTGGTGGTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: LLIPLLSRQIFLQCL*ATVLSNRQRWWWWG
Trigger: CCCCCACCACCACCACCTCTGCCTGTTGCTAAGGACAGTGGCCCAGAGACACTGGAGAAAGATCTGCCTAGAAAGGAGGGGAATGAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 90 bp AAACCTTCAGCAGTCTTTCTGAGCTTCTTCCGTGCACTGACCAGCTaGCTGCTGTCAAAGAGGTGTGCTGAGGGGGCACTGGCTGACTTT +
Preference number: 5 (lower is better)
Translates to: KPSAVFLSFFRALTS*LLSKRCAEGALADF
Trigger: AAAGTCAGCCAGTGCCCCCTCAGCACACCTCTTTGACAGCAGCCAGCTGGTCAGTGCACGGAAGAAGCTCAGAAAGACTGCTGAAGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp ATGGTTCTCAAAGCAGTCCCAATACAGCTCACAGTAGATCTCTGTCAACCCAGTGACCGCCGAGCTCCTTaGTGGCGCGGATCGAGAGAA +
Preference number: 5 (lower is better)
Translates to: MVLKAVPIQLTVDLCQPSDRRAP*WRGSRE
Trigger: TTCTCTCGATCCGCGCCACAAAGGAGCTCGGCGGTC...ACTGGGTTGACAGAGATCTACTGTGAGCTGTATTGGGACTGCTTTGAGAACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp AACAAAGGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATGCCGACTCTCCGCCCCTTaGCTGCCAGGACTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: NKGILPKFHSVHVKMVKCRLSAP*LPGLRS
Trigger: GCTGCGGAGTCCTGGCAGCAAAGGGGCGGAGAGTCG...GCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCCTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp ATGGTTCTCAAAGCAGTCCCAATACAGCTCACAGTAGATCTCTGTCAACCCAGTAAACCCGTCCACGTCTaGCTTCCAGCTGGCGTGCTT +
Preference number: 5 (lower is better)
Translates to: MVLKAVPIQLTVDLCQPSKPVHV*LPAGVL
Trigger: AAGCACGCCAGCTGGAAGCAAGACGTGGACGGGTTT...ACTGGGTTGACAGAGATCTACTGTGAGCTGTATTGGGACTGCTTTGAGAACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS GCA 90 bp TTTATTTCTGAGGTAGGATTTCTTGGCAGAAACCCGTCCACGTCTTaGTTCCAGCTGGCGTGCTTTCTGCTGAAGTTTCTGCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: FISEVGFLGRNPSTS*FQLACFLLKFLQLF
Trigger: GAAGAGCTGCAGAAACTTCAGCAGAAAGCACGCCAGCTGGAAGCAAGACGTGGACGGGTTTCTGCCAAGAAATCCTACCTCAGAAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp CACATAAAAAGTACGGGCGAGTTTGGAACTGGAAATGTGAGCATCTACAAGTACGCCGAGGCTGGCAGATaGCTTGAGTCCAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: HIKSTGEFGTGNVSIYKYAEAGR*LESRSS
Trigger: TGAACTCCTGGACTCAAGCAATCTGCCAGCCTCGGC...GTACTTGTAGATGCTCACATTTCCAGTTCCAAACTCGCCCGTACTTTTTATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS TCA 90 bp TCATCAGGAAAAGGAGGCAGAGTTCGCTGTTCAACCTTTTTCAGATaGAAACTACCACGCTTCAAGGAGGCTAGCACCTCATCCATGGGT +
Preference number: 5 (lower is better)
Translates to: SSGKGGRVRCSTFFR*KLPRFKEASTSSMG
Trigger: ACCCATGGATGAGGTGCTAGCCTCCTTGAAGCGTGGTAGTTTTCATCTGAAAAAGGTTGAACAGCGAACTCTGCCTCCTTTTCCTGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp ATACTGATCCCATTCCAAACAGAGAGAATGCTGCCCATTAGTTTTTGTTTCACTGGCTCTGGGGTTCTGTaGTCTGTGATGGCCCACGCT +
Preference number: 5 (lower is better)
Translates to: ILIPFQTERMLPISFCFTGSGVL*SVMAHA
Trigger: AGCGTGGGCCATCACAGACAACAGAACCCCAGAGCC...AGTGAAACAAAAACTAATGGGCAGCATTCTCTCTGTTTGGAATGGGATCAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp CACATAAAAAGTACGGGCGAGTTTGGAACTGGAAATGTGAGCATCTACAAGTACGGGCACTGGCTGACTTaGGGATCCTCTTCTCATTCC +
Preference number: 5 (lower is better)
Translates to: HIKSTGEFGTGNVSIYKYGHWLT*GSSSHS
Trigger: GGAATGAGAAGAGGATCCCAAAGTCAGCCAGTGCCC...GTACTTGTAGATGCTCACATTTCCAGTTCCAAACTCGCCCGTACTTTTTATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 90 bp GCTTCAAGTTGTGTTAATGAAGTATCTTCAAGTTGCACAAGGCTCTaGGGTTCTGTTGTCTGTGATGGCCCACGCTTGACTCTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: ASSCVNEVSSSCTRL*GSVVCDGPRLTLPS
Trigger: AGAAGGAAGAGTCAAGCGTGGGCCATCACAGACAACAGAACCCCAGAGCCTTGTGCAACTTGAAGATACTTCATTAACACAACTTGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 90 bp TCCTCTGACTCTGGGGATGCTTCTTTAATTCTTCTAAGAGCTTCATaGATGCTCCGTGTTAGAGGGTCTGTATCGGGTAGAAGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: SSDSGDASLILLRAS*MLRVRGSVSGRSVK
Trigger: CTTCACACTTCTACCCGATACAGACCCTCTAACACGGAGCATCCATGAAGCTCTTAGAAGAATTAAAGAAGCATCCCCAGAGTCAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS TCA 90 bp AACTGCATACTGGAGTTTTTCCATCCGTTCAGCAGCCGCTGCCCATaGTGCTTTACCAAATTTCTTCTGATCAGCTCGCATTCGATCATA +
Preference number: 5 (lower is better)
Translates to: NCILEFFHPFSSRCP*CFTKFLLISSHSII
Trigger: TATGATCGAATGCGAGCTGATCAGAAGAAATTTGGTAAAGCATCATGGGCAGCGGCTGCTGAACGGATGGAAAAACTCCAGTATGCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTCTCTGGGCCGTCCGGTaGTGGCAGGTTATGGCAAAC +
Preference number: 5 (lower is better)
Translates to: KLTVKWAVTLISKCPKLILWAVR*WQVMAN
Trigger: GTTTGCCATAACCTGCCACAACCGGACGGCCCAGAG...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp AACAAAGGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATGCAGGCTGGCAGATTGCTaGAGTCCAGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: NKGILPKFHSVHVKMVKCRLADC*SPGVQD
Trigger: GTCTTGAACTCCTGGACTCAAGCAATCTGCCAGCCT...GCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCCTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp GTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTGGAAAGTTAACCACCCCCATGCTGTaGAAGCTTCCATATTACATC +
Preference number: 5 (lower is better)
Translates to: VEVGTCTLRQGNGCVGKLTTPML*KLPYYI
Trigger: GATGTAATATGGAAGCTTCAACAGCATGGGGGTGGT...TAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp TCTGTACATGCACCTTACAGTGGCATAATGTCTCTGCAGAAGGGAAGAGACAGTAGGAGCCATTTGAAATaGACAGTCAAGTGGGCAGTA +
Preference number: 5 (lower is better)
Translates to: SVHAPYSGIMSLQKGRDSRSHLK*TVKWAV
Trigger: TACTGCCCACTTGACTGTCAATTTCAAATGGCTCCT...ACTGTCTCTTCCCTTCTGCAGAGACATTATGCCACTGTAAGGTGCATGTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp GTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTGGAAAGTTAATGCTCTCTGTATTCTaGTGCTTATCCAAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: VEVGTCTLRQGNGCVGKLMLSVF*CLSKSS
Trigger: GGAGCTCTTGGATAAGCACAAGAATACAGAGAGCAT...TAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp GTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTGGAAAGTTAATATACACTGGGCTTTaGCTCCAGTACTGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: VEVGTCTLRQGNGCVGKLIYTGL*LQYCFL
Trigger: CAGAAAGCAGTACTGGAGCAAAAGCCCAGTGTATAT...TAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp AGGCCAAGATCTGTCTTATGCAGAATTATATGTACAGGGTACTGCACACTGAGTACAATAAAGACGAATTaGTGTTTCTCGCGCTCGTCG +
Preference number: 5 (lower is better)
Translates to: RPRSVLCRIICTGYCTLSTIKTN*CFSRSS
Trigger: CGACGAGCGCGAGAAACACAAATTCGTCTTTATTGT...ACTCAGTGTGCAGTACCCTGTACATATAATTCTGCATAAGACAGATCTTGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp GTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTGGAAAGTTACTTCTGTTATGTCACTaGTTAGTTCTCCCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: VEVGTCTLRQGNGCVGKLLLLCH*LVLPVC
Trigger: ACAGACTGGGAGAACTAACAAGTGACATAACAGAAG...TAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS TCA 90 bp TCAGTTTTCTCTTCTACCTGTAACACACTTGGTAAAGAGTCACAATaGTCCTCTTGGAGAACAGGACTTGCTGCACCTTTTCTTCTTGCA +
Preference number: 5 (lower is better)
Translates to: SVFSSTCNTLGKESQ*SSWRTGLAAPFLLA
Trigger: TGCAAGAAGAAAAGGTGCAGCAAGTCCTGTTCTCCAAGAGGATCATTGTGACTCTTTACCAAGTGTGTTACAGGTAGAAGAGAAAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS TCA 90 bp CTTCATGGATGCTCCGTGTTAGAGGGTCTGTATCGGGTAGAAGTGTaGAGGATTCTCTCAAAACATCCTTCTGTACCTTCTTCAATTTTA +
Preference number: 5 (lower is better)
Translates to: LHGCSVLEGLYRVEV*RILSKHPSVPSSIL
Trigger: TAAAATTGAAGAAGGTACAGAAGGATGTTTTGAGAGAATCCTTCACACTTCTACCCGATACAGACCCTCTAACACGGAGCATCCATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 90 bp TGGATTTATGGTAACAGAACATGGTTCGAGGTTGTTATTCAAAAGTaGAAGAGATATAGTGGGAGGCAGTTCAGAGGTAACACCACTGAG +
Preference number: 5 (lower is better)
Translates to: WIYGNRTWFEVVIQK*KRYSGRQFRGNTTE
Trigger: CTCAGTGGTGTTACCTCTGAACTGCCTCCCACTATATCTCTTCCACTTTTGAATAACAACCTCGAACCATGTTCTGTTACCATAAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp GAACCAATGAACTTTGGATCTAATGTTATCCAACTGAGGAACCAAGTGCTTAAACAGGTTATGGCAAACTaGCCCTCAATCTCGTTCCAG +
Preference number: 5 (lower is better)
Translates to: EPMNFGSNVIQLRNQVLKQVMAN*PSISFQ
Trigger: CTGGAACGAGATTGAGGGCAAGTTTGCCATAACCTG...TTTAAGCACTTGGTTCCTCAGTTGGATAACATTAGATCCAAAGTTCATTGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp TCTGTACATGCACCTTACAGTGGCATAATGTCTCTGCAGAAGGGAAGAGACAGTTCTGATATAAGTCTTTaGATGCTTTCTAGTTGCGCT +
Preference number: 5 (lower is better)
Translates to: SVHAPYSGIMSLQKGRDSSDISL*MLSSCA
Trigger: AGCGCAACTAGAAAGCATCAAAAGACTTATATCAGA...ACTGTCTCTTCCCTTCTGCAGAGACATTATGCCACTGTAAGGTGCATGTACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp AGGCCAAGATCTGTCTTATGCAGAATTATATGTACAGGGTACTGCACACTGAGTTGCATTAGGAGCCATTaGAAATTGACAGTCAAGTGG +
Preference number: 5 (lower is better)
Translates to: RPRSVLCRIICTGYCTLSCIRSH*KLTVKW
Trigger: CCACTTGACTGTCAATTTCAAATGGCTCCTAATGCA...ACTCAGTGTGCAGTACCCTGTACATATAATTCTGCATAAGACAGATCTTGGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp CACATAAAAAGTACGGGCGAGTTTGGAACTGGAAATGTGAGCATCTACAAGTACGAACATGGTTCGAGGTaGTTATTCAAAAGTGGAAGA +
Preference number: 5 (lower is better)
Translates to: HIKSTGEFGTGNVSIYKYEHGSR*LFKSGR
Trigger: TCTTCCACTTTTGAATAACAACCTCGAACCATGTTC...GTACTTGTAGATGCTCACATTTCCAGTTCCAAACTCGCCCGTACTTTTTATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp CAACTGAGGAACCAAGTGCTTAAACTGTCATTTTCCAAAAGAATCAGAACCAATGCCAGCCACGGAGACTaGTCTCTACTTTCTATCTTT +
Preference number: 5 (lower is better)
Translates to: QLRNQVLKLSFSKRIRTNASHGD*SLLSIF
Trigger: AAAGATAGAAAGTAGAGACAAGTCTCCGTGGCTGGC...ATTGGTTCTGATTCTTTTGGAAAATGACAGTTTAAGCACTTGGTTCCTCAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp ATACTGATCCCATTCCAAACAGAGAGAATGCTGCCCATTAGTTTTTGTTTCACTTCCACCCTCCACTCTTaGCTAGAGACTTATGATTAC +
Preference number: 5 (lower is better)
Translates to: ILIPFQTERMLPISFCFTSTLHS*LETYDY
Trigger: GTAATCATAAGTCTCTAGCAAAGAGTGGAGGGTGGA...AGTGAAACAAAAACTAATGGGCAGCATTCTCTCTGTTTGGAATGGGATCAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp GTAGAAGTAGGAACCTGCACCTTAAGGCAAGGAAATGGGTGTGTTGGAAAGTTAAAGGAAATGGGTGTGTaGGAAAGTTATTTACAAGAG +
Preference number: 5 (lower is better)
Translates to: VEVGTCTLRQGNGCVGKLKEMGV*ESYLQE
Trigger: CTCTTGTAAATAACTTTCCAACACACCCATTTCCTT...TAACTTTCCAACACACCCATTTCCTTGCCTTAAGGTGCAGGTTCCTACTTCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp AACAAAGGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATGCCTACCTGTAACACACTaGGTAAAGAGTCACAATGAT +
Preference number: 5 (lower is better)
Translates to: NKGILPKFHSVHVKMVKCLPVTH*VKSHND
Trigger: ATCATTGTGACTCTTTACCAAGTGTGTTACAGGTAG...GCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCCTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp AACAAAGGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATGCGTTAACCATCATCTATaGGAACGACTGGAAAGTGAT +
Preference number: 5 (lower is better)
Translates to: NKGILPKFHSVHVKMVKCVNHHL*ERLESD
Trigger: ATCACTTTCCAGTCGTTCCAATAGATGATGGTTAAC...GCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCCTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp CACATAAAAAGTACGGGCGAGTTTGGAACTGGAAATGTGAGCATCTACAAGTACATCCCCAAATTTCCCTaGTTAAAACTGAACTCTGTA +
Preference number: 5 (lower is better)
Translates to: HIKSTGEFGTGNVSIYKYIPKFP*LKLNSV
Trigger: TACAGAGTTCAGTTTTAACAAGGGAAATTTGGGGAT...GTACTTGTAGATGCTCACATTTCCAGTTCCAAACTCGCCCGTACTTTTTATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTTTCTCCATGGAAATCTaGATCTGCTGTCTTCGTAGC +
Preference number: 5 (lower is better)
Translates to: KLTVKWAVTLISKCPKLIFSMEI*ICCLRS
Trigger: GCTACGAAGACAGCAGATCAAGATTTCCATGGAGAA...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTCTGCACCTTTTCTTCTaGCATGAGCTAGTCGTAATC +
Preference number: 5 (lower is better)
Translates to: KLTVKWAVTLISKCPKLILHLFF*HELVVI
Trigger: GATTACGACTAGCTCATGCAAGAAGAAAAGGTGCAG...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp AACAAAGGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATGCCCTACACATGCTACATaGGTTATAATTTTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: NKGILPKFHSVHVKMVKCPTHAT*VIILVA
Trigger: TGCAACCAAAATTATAACCAATGTAGCATGTGTAGG...GCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCCTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTTGGCCCAAGTATGCTTaGCAACTTGACACACATTCT +
Preference number: 5 (lower is better)
Translates to: KLTVKWAVTLISKCPKLIWPKYA*QLDTHS
Trigger: AGAATGTGTGTCAAGTTGCAAAGCATACTTGGGCCA...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp ATACTGATCCCATTCCAAACAGAGAGAATGCTGCCCATTAGTTTTTGTTTCACTACCTTGTATTTAGCTTaGCCTAGGCTAAAAGCATTG +
Preference number: 5 (lower is better)
Translates to: ILIPFQTERMLPISFCFTTLYLA*PRLKAL
Trigger: CAATGCTTTTAGCCTAGGCAAAGCTAAATACAAGGT...AGTGAAACAAAAACTAATGGGCAGCATTCTCTCTGTTTGGAATGGGATCAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp GAACCAATGAACTTTGGATCTAATGTTATCCAACTGAGGAACCAAGTGCTTAAACCTACAATTGCGAAGTaGTACATTTACTGTGGGCAA +
Preference number: 5 (lower is better)
Translates to: EPMNFGSNVIQLRNQVLKPTIAK*YIYCGQ
Trigger: TTGCCCACAGTAAATGTACAACTTCGCAATTGTAGG...TTTAAGCACTTGGTTCCTCAGTTGGATAACATTAGATCCAAAGTTCATTGGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp AACAAAGGCATTCTCCCAAAATTCCATTCAGTGCATGTGAAGATGGTGAAATGCAATTTGTTACACCCTTaGATAGCTACCCATAGAACA +
Preference number: 5 (lower is better)
Translates to: NKGILPKFHSVHVKMVKCNLLHP*IATHRT
Trigger: TGTTCTATGGGTAGCTATCAAAGGGTGTAACAAATT...GCATTTCACCATCTTCACATGCACTGAATGGAATTTTGGGAGAATGCCTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp AAATTGACAGTCAAGTGGGCAGTAACATTAATCTCAAAATGTCCCAAACTCATTGTCTTACATAACCTGTaGCCAGAAAATTTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: KLTVKWAVTLISKCPKLIVLHNL*PENFLP
Trigger: AGGGAGAAAATTTTCTGGCAACAGGTTATGTAAGAC...AATGAGTTTGGGACATTTTGAGATTAATGTTACTGCCCACTTGACTGTCAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp ATGAATGTTCCAGGGTTTCTGGTTAATTTAACATTAGATCCGTCCGTATTTTTCGTGTCTGCAATGGTTTaGAAATGTCTTACAGCTGTT +
Preference number: 5 (lower is better)
Translates to: MNVPGFLVNLTLDPSVFFVSAMV*KCLTAV
Trigger: AACAGCTGTAAGACATTTCAAAACCATTGCAGACAC...GAAAAATACGGACGGATCTAATGTTAAATTAACCAGAAACCCTGGAACATTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS-3UTR CAA 90 bp ATGAATGTTCCAGGGTTTCTGGTTAATTTAACATTAGATCCGTCCGTATTTTTCCCTATTTTAAATGCATaGCAGTTGAGACTAGATTGG +
Preference number: 5 (lower is better)
Translates to: MNVPGFLVNLTLDPSVFFPILNA*QLRLDW
Trigger: CCAATCTAGTCTCAACTGCAATGCATTTAAAATAGG...GAAAAATACGGACGGATCTAATGTTAAATTAACCAGAAACCCTGGAACATTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS GCA 72 bp GACTCCGCAGCCGCGGGTCCCCCAGAAGGCTGCGAGTaGTCCGAGGAGAGCCGCCCTCCGCCCAGGCCGAGC +
Preference number: 6 (lower is better)
Translates to: DSAAAGPPEGCE*SEESRPPPRPS
Trigger: GCTCGGCCTGGGCGGAGGGCGGCTCTCCTCGGAGCACTCGCAGCCTTCTGGGGGACCCGCGGCTGCGGAGTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS GCA 72 bp TCGGCCGGAGACTCCAGCTCGGTGGCGGGCGGCGGCTaGTCCGCGTCCGAGAGCGCCAGAGGTGCCTCGTCC +
Preference number: 6 (lower is better)
Translates to: SAGDSSSVAGGG*SASESARGASS
Trigger: GGACGAGGCACCTCTGGCGCTCTCGGACGCGGAGCAGCCGCCGCCCGCCACCGAGCTGGAGTCTCCGGCCGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS GCA 72 bp TGCCAGGACTCCGCAGCCGCGGGTCCCCCAGAAGGCTaGGAGTGCTCCGAGGAGAGCCGCCCTCCGCCCAGG +
Preference number: 6 (lower is better)
Translates to: CQDSAAAGPPEG*ECSEESRPPPR
Trigger: CCTGGGCGGAGGGCGGCTCTCCTCGGAGCACTCGCAGCCTTCTGGGGGACCCGCGGCTGCGGAGTCCTGGCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 72 bp CCGACTCGAGCGTCTCCTCCAGCGCGAACGACATGGTaGCTCCGGCTTCTCGCCGCGGGGAAGGGCCGCCGG +
Preference number: 6 (lower is better)
Translates to: PTRASPPARTTW*LRLLAAGKGRR
Trigger: CCGGCGGCCCTTCCCCGCGGCGAGAAGCCGGAGCCACCATGTCGTTCGCGCTGGAGGAGACGCTCGAGTCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 72 bp CGCTCACTATCCGTACAGAGGACACCTGGGCCTCTCTaGGCGCCGGCCGGGCTGCTGCAGCGGCTGCCCCCG +
Preference number: 6 (lower is better)
Translates to: RSLSVQRTPGPL*APAGLLQRLPP
Trigger: CGGGGGCAGCCGCTGCAGCAGCCCGGCCGGCGCCCAGAGAGGCCCAGGTGTCCTCTGTACGGATAGTGAGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 72 bp AGTCCGACTCGAGCGTCTCCTCCAGCGCGAACGACATaGTGGCTCCGGCTTCTCGCCGCGGGGAAGGGCCGC +
Preference number: 6 (lower is better)
Translates to: SPTRASPPARTT*WLRLLAAGKGR
Trigger: GCGGCCCTTCCCCGCGGCGAGAAGCCGGAGCCACCATGTCGTTCGCGCTGGAGGAGACGCTCGAGTCGGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CAA 72 bp GCCCGCACTGGGCTCCTAAGACGACTCTCCGCCCCTTaGCTGCCAGGACTCCGCAGCCGCGGGTCCCCCAGA +
Preference number: 6 (lower is better)
Translates to: ARTGLLRRLSAP*LPGLRSRGSPR
Trigger: TCTGGGGGACCCGCGGCTGCGGAGTCCTGGCAGCAAAGGGGCGGAGAGTCGTCTTAGGAGCCCAGTGCGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CAA 90 bp ATGGGTTTGGCCCGCACTGGGCTCCTAAGACGACTCTCCGCCCCTTaGCTGCCAGGACTCCGCAGCCGCGGGTCCCCCAGAAGGCTGCGA +
Preference number: 6 (lower is better)
Translates to: MGLARTGLLRRLSAP*LPGLRSRGSPRRLR
Trigger: TCGCAGCCTTCTGGGGGACCCGCGGCTGCGGAGTCCTGGCAGCAAAGGGGCGGAGAGTCGTCTTAGGAGCCCAGTGCGGGCCAAACCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS GCA 72 bp GGTTCCTCGGGGAACACCGGCAGGCACGGCTCCAACTaGGAGTTCACCGAGCACAGCTGCTGGTGCACGGCG +
Preference number: 6 (lower is better)
Translates to: GSSGNTGRHGSN*EFTEHSCWCTA
Trigger: CGCCGTGCACCAGCAGCTGTGCTCGGTGAACTCGCAGTTGGAGCCGTGCCTGCCGGTGTTCCCCGAGGAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CAA 90 bp CCCGCTTGCTCCCGGGAGCCGCTCCTCTGCCTCTGGGCCGTCCGGTaGTGGCAGGTTATGGCAAACTTGCCCTCAATCTCGTTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: PACSREPLLCLWAVR*WQVMANLPSISFQA
Trigger: GGCCTGGAACGAGATTGAGGGCAAGTTTGCCATAACCTGCCACAACCGGACGGCCCAGAGGCAGAGGAGCGGCTCCCGGGAGCAAGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS TCA 72 bp GCTGCCCCCGCCGCATCGTCGGCTTCAGATGTTTTCTaGCCCGGGATGGGTTTGGCCCGCACTGGGCTCCTA +
Preference number: 6 (lower is better)
Translates to: AAPAASSASDVF*PGMGLARTGLL
Trigger: TAGGAGCCCAGTGCGGGCCAAACCCATCCCGGGTCAGAAAACATCTGAAGCCGACGATGCGGCGGGGGCAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS TCA 72 bp GCCCCTGGTGCTGCTGCAGAAAGCCCGGAGCCGGCCTaGCTGATGAACCCGTCTCCTAAACTCTGCGCCTCA +
Preference number: 6 (lower is better)
Translates to: APGAAAESPEPA*LMNPSPKLCAS
Trigger: TGAGGCGCAGAGTTTAGGAGACGGGTTCATCAGTCAGGCCGGCTCCGGGCTTTCTGCAGCAGCACCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CAA 72 bp TCCCGGGAGCCGCTCCTCTGCCTCTGGGCCGTCCGGTaGTGGCAGGTTATGGCAAACTTGCCCTCAATCTCG +
Preference number: 6 (lower is better)
Translates to: SREPLLCLWAVR*WQVMANLPSIS
Trigger: CGAGATTGAGGGCAAGTTTGCCATAACCTGCCACAACCGGACGGCCCAGAGGCAGAGGAGCGGCTCCCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS GCA 72 bp AGGCACGGCTCCAACTGCGAGTTCACCGAGCACAGCTaGTGGTGCACGGCGCGCAGGTCCTGGAAAGAAAAC +
Preference number: 6 (lower is better)
Translates to: RHGSNCEFTEHS*WCTARRSWKEN
Trigger: GTTTTCTTTCCAGGACCTGCGCGCCGTGCACCAGCAGCTGTGCTCGGTGAACTCGCAGTTGGAGCCGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 72 bp CGGGAGCCGCTCCTCTGCCTCTGGGCCGTCCGGTTGTaGCAGGTTATGGCAAACTTGCCCTCAATCTCGTTC +
Preference number: 6 (lower is better)
Translates to: REPLLCLWAVRL*QVMANLPSISF
Trigger: GAACGAGATTGAGGGCAAGTTTGCCATAACCTGCCACAACCGGACGGCCCAGAGGCAGAGGAGCGGCTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 72 bp TACTCCTCGGGATCATCGGTCTCGGTGAAGAGCACCTaGGAGAGGATCTTCCAGCCGCAGGTGTCCAGGCCG +
Preference number: 6 (lower is better)
Translates to: YSSGSSVSVKST*ERIFQPQVSRP
Trigger: CGGCCTGGACACCTGCGGCTGGAAGATCCTCTCCCAGGTGCTCTTCACCGAGACCGATGATCCCGAGGAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 72 bp AGATGTTTTCTGACCCGGGATGGGTTTGGCCCGCACTaGGCTCCTAAGACGACTCTCCGCCCCTTTGCTGCC +
Preference number: 6 (lower is better)
Translates to: RCFLTRDGFGPH*APKTTLRPFAA
Trigger: GGCAGCAAAGGGGCGGAGAGTCGTCTTAGGAGCCCAGTGCGGGCCAAACCCATCCCGGGTCAGAAAACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 72 bp AAGACGAATTTGTGTTTCTCGCGCTCGTCGAACACATaGGGCCGCACAGCCACCCAGTCCGACTCGAGCGTC +
Preference number: 6 (lower is better)
Translates to: KTNLCFSRSSNT*GRTATQSDSSV
Trigger: GACGCTCGAGTCGGACTGGGTGGCTGTGCGGCCCCATGTGTTCGACGAGCGCGAGAAACACAAATTCGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 72 bp GCTGGCTGCTGTCAAAGAGGTGTGCTGAGGGGGCACTaGCTGACTTTGGGATCCTCTTCTCATTCCCCTCCT +
Preference number: 6 (lower is better)
Translates to: AGCCQRGVLRGH*LTLGSSSHSPP
Trigger: AGGAGGGGAATGAGAAGAGGATCCCAAAGTCAGCCAGTGCCCCCTCAGCACACCTCTTTGACAGCAGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 72 bp GCAGTCTTTCTGAGCTTCTTCCGTGCACTGACCAGCTaGCTGCTGTCAAAGAGGTGTGCTGAGGGGGCACTG +
Preference number: 6 (lower is better)
Translates to: AVFLSFFRALTS*LLSKRCAEGAL
Trigger: CAGTGCCCCCTCAGCACACCTCTTTGACAGCAGCCAGCTGGTCAGTGCACGGAAGAAGCTCAGAAAGACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 72 bp TCTTGTGCTTATCCAAGAGCTCCTGGATGCGCTTCCTaGCCCGCTGAAGCACTTCTTCGTAGCCCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: SCAYPRAPGCAS*PAEALLRSPSA
Trigger: GGCAGAAGGGCTACGAAGAAGTGCTTCAGCGGGCCAGGAAGCGCATCCAGGAGCTCTTGGATAAGCACAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS TCA 72 bp GAAGCACTTCTTCGTAGCCCTTCTGCCGCAGCTCGCTaGGGCTTTCGTAATACTCCTCGGGATCATCGGTCT +
Preference number: 6 (lower is better)
Translates to: EALLRSPSAAAR*GFRNTPRDHRS
Trigger: AGACCGATGATCCCGAGGAGTATTACGAAAGCCTCAGCGAGCTGCGGCAGAAGGGCTACGAAGAAGTGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS GCA 72 bp CTGCAAACCTTCAGCAGTCTTTCTGAGCTTCTTCCGTaGACTGACCAGCTGGCTGCTGTCAAAGAGGTGTGC +
Preference number: 6 (lower is better)
Translates to: LQTFSSLSELLP*TDQLAAVKEVC
Trigger: GCACACCTCTTTGACAGCAGCCAGCTGGTCAGTGCACGGAAGAAGCTCAGAAAGACTGCTGAAGGTTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CAA 90 bp CTCCTCTGCCTCTGGGCCGTCCGGTTGTGGCAGGTTATGGCAAACTaGCCCTCAATCTCGTTCCAGGCCACAATAAAGACGAATTTGTGT +
Preference number: 6 (lower is better)
Translates to: LLCLWAVRLWQVMAN*PSISFQATIKTNLC
Trigger: ACACAAATTCGTCTTTATTGTGGCCTGGAACGAGATTGAGGGCAAGTTTGCCATAACCTGCCACAACCGGACGGCCCAGAGGCAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CAA 72 bp TACAAGTCCAGAAGCTCCACCATGCTCTCTGTATTCTaGTGCTTATCCAAGAGCTCCTGGATGCGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: YKSRSSTMLSVF*CLSKSSWMRFL
Trigger: CAGGAAGCGCATCCAGGAGCTCTTGGATAAGCACAAGAATACAGAGAGCATGGTGGAGCTTCTGGACTTGTA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS TCA 72 bp CTGGAGTTTTTCCATCCGTTCAGCAGCCGCTGCCCATaGTGCTTTACCAAATTTCTTCTGATCAGCTCGCAT +
Preference number: 6 (lower is better)
Translates to: LEFFHPFSSRCP*CFTKFLLISSH
Trigger: ATGCGAGCTGATCAGAAGAAATTTGGTAAAGCATCATGGGCAGCGGCTGCTGAACGGATGGAAAAACTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS TCA 72 bp AAAGGAGGCAGAGTTCGCTGTTCAACCTTTTTCAGATaGAAACTACCACGCTTCAAGGAGGCTAGCACCTCA +
Preference number: 6 (lower is better)
Translates to: KGGRVRCSTFFR*KLPRFKEASTS
Trigger: TGAGGTGCTAGCCTCCTTGAAGCGTGGTAGTTTTCATCTGAAAAAGGTTGAACAGCGAACTCTGCCTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 72 bp TGTGTTAATGAAGTATCTTCAAGTTGCACAAGGCTCTaGGGTTCTGTTGTCTGTGATGGCCCACGCTTGACT +
Preference number: 6 (lower is better)
Translates to: CVNEVSSSCTRL*GSVVCDGPRLT
Trigger: AGTCAAGCGTGGGCCATCACAGACAACAGAACCCCAGAGCCTTGTGCAACTTGAAGATACTTCATTAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS GCA 72 bp GTGGCTTCAAGTTGTGTTAATGAAGTATCTTCAAGTTaGACAAGGCTCTGGGGTTCTGTTGTCTGTGATGGC +
Preference number: 6 (lower is better)
Translates to: VASSCVNEVSSS*TRLWGSVVCDG
Trigger: GCCATCACAGACAACAGAACCCCAGAGCCTTGTGCAACTTGAAGATACTTCATTAACACAACTTGAAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 72 bp GGTAACAGAACATGGTTCGAGGTTGTTATTCAAAAGTaGAAGAGATATAGTGGGAGGCAGTTCAGAGGTAAC +
Preference number: 6 (lower is better)
Translates to: GNRTWFEVVIQK*KRYSGRQFRGN
Trigger: GTTACCTCTGAACTGCCTCCCACTATATCTCTTCCACTTTTGAATAACAACCTCGAACCATGTTCTGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS TCA 72 bp TGGAGAACAGGACTTGCTGCACCTTTTCTTCTTGCATaGGCTAGTCGTAATCTGGTTGATTTAAGTATGACT +
Preference number: 6 (lower is better)
Translates to: WRTGLAAPFLLA*ASRNLVDLSMT
Trigger: AGTCATACTTAAATCAACCAGATTACGACTAGCTCATGCAAGAAGAAAAGGTGCAGCAAGTCCTGTTCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396137.5
CDS CCA 72 bp AAGAGGGGATGGGAGTGGATTTATGGTAACAGAACATaGTTCGAGGTTGTTATTCAAAAGTGGAAGAGATAT +
Preference number: 6 (lower is better)
Translates to: KRGWEWIYGNRT*FEVVIQKWKRY
Trigger: ATATCTCTTCCACTTTTGAATAACAACCTCGAACCATGTTCTGTTACCATAAATCCACTCCCATCCCCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396137.5