RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for JDP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000140044

Ensembl transcript IDs: ENST00000267569.5, ENST00000419727.6, ENST00000435893.6, ENST00000437176.5, ENST00000558068.1, ENST00000559060.5, ENST00000559773.5, ENST00000651602.1

Found 659 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGCCCACAGCAAACTCCAGCAGGGCTGGCGAGGGTGCGCCCGGCTaGCGCCTCCTGGGCAGGGCCGCGCTGGACCGAGGTGGGTGGGGG +
Preference number: 1 (lower is better)
Translates to: VPTANSSRAGEGAPG*RLLGRAALDRGGWG
Trigger: CCCCCACCCACCTCGGTCCAGCGCGGCCCTGCCCAGGAGGCGGCAGCCGGGCGCACCCTCGCCAGCCCTGCTGGAGTTTGCTGTGGGCAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 90 bp CAAACTCCAGCAGGGCTGGCGAGGGTGCGCCCGGCTGCCGCCTCCTaGGCAGGGCCGCGCTGGACCGAGGTGGGTGGGGGCATCAGGGCC +
Preference number: 1 (lower is better)
Translates to: QTPAGLARVRPAAAS*AGPRWTEVGGGIRA
Trigger: GGCCCTGATGCCCCCACCCACCTCGGTCCAGCGCGGCCCTGCCCAGGAGGCGGCAGCCGGGCGCACCCTCGCCAGCCCTGCTGGAGTTTG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 90 bp GAAGGGCGCCCGCGCCTCAGTGCCCACAGCAAACTCCAGCAGGGCTaGCGAGGGTGCGCCCGGCTGCCGCCTCCTGGGCAGGGCCGCGCT +
Preference number: 1 (lower is better)
Translates to: EGRPRLSAHSKLQQG*RGCARLPPPGQGRA
Trigger: AGCGCGGCCCTGCCCAGGAGGCGGCAGCCGGGCGCACCCTCGCCAGCCCTGCTGGAGTTTGCTGTGGGCACTGAGGCGCGGGCGCCCTTC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 90 bp AAACATTCGGTGAGTATGTGCTTTGGAAGGGCGCCCGCGCCTCAGTaGCCACAGCAAACTCCAGCAGGGCTGGCGAGGGTGCGCCCGGCT +
Preference number: 1 (lower is better)
Translates to: KHSVSMCFGRAPAPQ*PQQTPAGLARVRPA
Trigger: AGCCGGGCGCACCCTCGCCAGCCCTGCTGGAGTTTGCTGTGGGCACTGAGGCGCGGGCGCCCTTCCAAAGCACATACTCACCGAATGTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR TCA 90 bp TGGCTTTTCCTGGCTGTTCGGAGGTTCCTTGGATGGGTGCCCTGGTaGAGAGGCCAGAGAAGAGCCCAGGGCTGCCTCGTTGGGCGTCTC +
Preference number: 1 (lower is better)
Translates to: WLFLAVRRFLGWVPW*RGQRRAQGCLVGRL
Trigger: GAGACGCCCAACGAGGCAGCCCTGGGCTCTTCTCTGGCCTCTTCACCAGGGCACCCATCCAAGGAACCTCCGAACAGCCAGGAAAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 90 bp CAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTaGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCT +
Preference number: 1 (lower is better)
Translates to: QAGQPYPRVNFGLSA*SLWVSSARSSSWVA
Trigger: AGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 90 bp TCAAGTGGGGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTaGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTC +
Preference number: 1 (lower is better)
Translates to: SSGAPGRTTLPEGQL*SQRLVPLGFLSPLF
Trigger: GAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCCCCACTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 90 bp CTGCACAGGCTAAGGAGGCTCTATTTTGGAGATGCCAGCTCCCGGTaGCCAAGCACAGGACCAGGGAAGCCACAGCCAGTGGCACACGGC +
Preference number: 1 (lower is better)
Translates to: LHRLRRLYFGDASSR*PSTGPGKPQPVAHG
Trigger: GCCGTGTGCCACTGGCTGTGGCTTCCCTGGTCCTGTGCTTGGCCACCGGGAGCTGGCATCTCCAAAATAGAGCCTCCTTAGCCTGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 90 bp GCAACTCATGGCTTTTCCTGGCTGTTCGGAGGTTCCTTGGATGGGTaGCCTGGTGAAGAGGCCAGAGAAGAGCCCAGGGCTGCCTCGTTG +
Preference number: 1 (lower is better)
Translates to: ATHGFSWLFGGSLDG*PGEEAREEPRAASL
Trigger: CAACGAGGCAGCCCTGGGCTCTTCTCTGGCCTCTTCACCAGGGCACCCATCCAAGGAACCTCCGAACAGCCAGGAAAAGCCATGAGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 90 bp GCCTATAGCAGAGGCTCCAAACAGTCTCCGACCCTGAGAGGGCCTTaGACCCATTCCCCAGGCAGACACCACGCAAGGCGGCTATGTAAG +
Preference number: 1 (lower is better)
Translates to: AYSRGSKQSPTLRGP*THSPGRHHARRLCK
Trigger: CTTACATAGCCGCCTTGCGTGGTGTCTGCCTGGGGAATGGGTGCAAGGCCCTCTCAGGGTCGGAGACTGTTTGGAGCCTCTGCTATAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 90 bp CAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTaGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGT +
Preference number: 1 (lower is better)
Translates to: QPYPRVNFGLSAWSL*VSSARSSSWVADLS
Trigger: ACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 90 bp GTTTCTAGGGCGGGGTGCAGGGGAGTCCACACCAAGTGTGTTGGGTaGAGGGAAACTGAGAGGAGTGAGCGAGGGAGGGATCACAGGTGT +
Preference number: 1 (lower is better)
Translates to: VSRAGCRGVHTKCVG*RETERSERGRDHRC
Trigger: ACACCTGTGATCCCTCCCTCGCTCACTCCTCTCAGTTTCCCTCCACCCAACACACTTGGTGTGGACTCCCCTGCACCCCGCCCTAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR TCA 90 bp AAAATGAACAGGCCTATAGCAGAGGCTCCAAACAGTCTCCGACCCTaGGAGGGCCTTGCACCCATTCCCCAGGCAGACACCACGCAAGGC +
Preference number: 1 (lower is better)
Translates to: KMNRPIAEAPNSLRP*EGLAPIPQADTTQG
Trigger: GCCTTGCGTGGTGTCTGCCTGGGGAATGGGTGCAAGGCCCTCTCAGGGTCGGAGACTGTTTGGAGCCTCTGCTATAGGCCTGTTCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR TCA 90 bp GGTCCTGGTGAGGAAGGCTCCGCACAGCACAAGTCACTGGTGTGGTaGCTTTGGAAGACAGCCCACCTGCACAGGCTAAGGAGGCTCTAT +
Preference number: 1 (lower is better)
Translates to: GPGEEGSAQHKSLVW*LWKTAHLHRLRRLY
Trigger: ATAGAGCCTCCTTAGCCTGTGCAGGTGGGCTGTCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTGCGGAGCCTTCCTCACCAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 90 bp AAAGCCCTGCCAGGACAGCCAGTCTGTAAACATTCGGTGAGTATGTaGTTTGGAAGGGCGCCCGCGCCTCAGTGCCCACAGCAAACTCCA +
Preference number: 1 (lower is better)
Translates to: KALPGQPVCKHSVSM*FGRAPAPQCPQQTP
Trigger: TGGAGTTTGCTGTGGGCACTGAGGCGCGGGCGCCCTTCCAAAGCACATACTCACCGAATGTTTACAGACTGGCTGTCCTGGCAGGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 90 bp AGTTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTaGCTGTTCGGAGGTTCCTTGGATGGGTGCCCTGGTGAAGAGGCC +
Preference number: 1 (lower is better)
Translates to: SSILSRVLVATHGFS*LFGGSLDGCPGEEA
Trigger: GGCCTCTTCACCAGGGCACCCATCCAAGGAACCTCCGAACAGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR TCA 90 bp GTCTGTGCCATCTCTCCCGGCTTCCTGCACAAGTTCCCTGGCAACTaGGGTCACACCACAAACACATTTTTCCTCTCATGGGGAGGCTCA +
Preference number: 1 (lower is better)
Translates to: VCAISPGFLHKFPGN*GHTTNTFFLSWGGS
Trigger: TGAGCCTCCCCATGAGAGGAAAAATGTGTTTGTGGTGTGACCTCAGTTGCCAGGGAACTTGTGCAGGAAGCCGGGAGAGATGGCACAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 90 bp ACAAGGAAGCTAAAAACACCTCTCCCGCCTTCCTCATGCGTGACATaGCTTGAGAACTGCCGAGTGCCAGGTACACAGCAGGCACTGAGT +
Preference number: 1 (lower is better)
Translates to: TRKLKTPLPPSSCVT*LENCRVPGTQQALS
Trigger: ACTCAGTGCCTGCTGTGTACCTGGCACTCGGCAGTTCTCAAGGCATGTCACGCATGAGGAAGGCGGGAGAGGTGTTTTTAGCTTCCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 90 bp AGCGAGGGAGGGATCACAGGTGTGTTAATCACCATTCTCCACTTCTaGCCATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAG +
Preference number: 1 (lower is better)
Translates to: SEGGITGVLITILHF*PSQKASSTIWEATQ
Trigger: CTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATGGGCAGAAGTGGAGAATGGTGATTAACACACCTGTGATCCCTCCCTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR TCA 90 bp CAGGGCCTGGCACACACAACAGGCCCTCAGAAAACATCTGCAGAGTaGGCGAACACTCTGACTGCTCTCAAAATAGTAACTGCAGGTGGC +
Preference number: 1 (lower is better)
Translates to: QGLAHTTGPQKTSAE*ANTLTALKIVTAGG
Trigger: GCCACCTGCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCTCACTCTGCAGATGTTTTCTGAGGGCCTGTTGTGTGTGCCAGGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 90 bp TTTCATTCTGAGTTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATaGCTTTTCCTGGCTGTTCGGAGGTTCCTTGGATGGGTGCCCTGG +
Preference number: 1 (lower is better)
Translates to: FHSEFHPQPRFGCNS*LFLAVRRFLGWVPW
Trigger: CCAGGGCACCCATCCAAGGAACCTCCGAACAGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAACTCAGAATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 90 bp GGGTTGCAGTTTCATTCTGAGTTCCATCCTCAGCCGCGTTTTGGTTaGAACTCATGGCTTTTCCTGGCTGTTCGGAGGTTCCTTGGATGG +
Preference number: 1 (lower is better)
Translates to: GLQFHSEFHPQPRFG*NSWLFLAVRRFLGW
Trigger: CCATCCAAGGAACCTCCGAACAGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAACTCAGAATGAAACTGCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 90 bp CTTCAGTATACAAGGAAGCTAAAAACACCTCTCCCGCCTTCCTCATaGGTGACATGCCTTGAGAACTGCCGAGTGCCAGGTACACAGCAG +
Preference number: 1 (lower is better)
Translates to: LQYTRKLKTPLPPSS*VTCLENCRVPGTQQ
Trigger: CTGCTGTGTACCTGGCACTCGGCAGTTCTCAAGGCATGTCACGCATGAGGAAGGCGGGAGAGGTGTTTTTAGCTTCCTTGTATACTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR TCA 90 bp TGGGGACAAGTGCTGTTCCCTGGCAAGGCTGCCATGAAGACGAAATaGGACAACTTATGGAGCAAGCACAGGATTCACTCCTTACTGGAG +
Preference number: 1 (lower is better)
Translates to: WGQVLFPGKAAMKTK*DNLWSKHRIHSLLE
Trigger: CTCCAGTAAGGAGTGAATCCTGTGCTTGCTCCATAAGTTGTCTCATTTCGTCTTCATGGCAGCCTTGCCAGGGAACAGCACTTGTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 90 bp GAATTCTCAGGGCCTGGCACACACAACAGGCCCTCAGAAAACATCTaGAGAGTGAGCGAACACTCTGACTGCTCTCAAAATAGTAACTGC +
Preference number: 1 (lower is better)
Translates to: EFSGPGTHNRPSENI*RVSEHSDCSQNSNC
Trigger: GCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCTCACTCTGCAGATGTTTTCTGAGGGCCTGTTGTGTGTGCCAGGCCCTGAGAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 90 bp TCAGGGTGCACAAAGCAGTTGAGGTCACACATGCACAGTGGCAGGTaGCCAGAAGAAACTCAAATGCTGGCTCTTGCAATGAAGCCTATA +
Preference number: 1 (lower is better)
Translates to: SGCTKQLRSHMHSGR*PEETQMLALAMKPI
Trigger: TATAGGCTTCATTGCAAGAGCCAGCATTTGAGTTTCTTCTGGGCACCTGCCACTGTGCATGTGTGACCTCAACTGCTTTGTGCACCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 90 bp AGCCTCAGGTTTTATGCACCTGAAGTCAGACTGACAATAACATCTTaGCTCTGCCACCTAACACCTGTGACCTTGGGCAGGTTACCTCTT +
Preference number: 1 (lower is better)
Translates to: SLRFYAPEVRLTITS*LCHLTPVTLGRLPL
Trigger: AAGAGGTAACCTGCCCAAGGTCACAGGTGTTAGGTGGCAGAGCCAAGATGTTATTGTCAGTCTGACTTCAGGTGCATAAAACCTGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 90 bp AACAGGCCCTCAGAAAACATCTGCAGAGTGAGCGAACACTCTGACTaGTCTCAAAATAGTAACTGCAGGTGGCTTAATGTCTCTGAGCCT +
Preference number: 1 (lower is better)
Translates to: NRPSENICRVSEHSD*SQNSNCRWLNVSEP
Trigger: AGGCTCAGAGACATTAAGCCACCTGCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCTCACTCTGCAGATGTTTTCTGAGGGCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 90 bp CACAAAATAAGTCTTCAACAAATGGTGTCTGCGAGTTTAATTCCCTaGACCTCTAATTCGCCATCTGTGAATTGGGGACAAGTGCTGTTC +
Preference number: 1 (lower is better)
Translates to: HKISLQQMVSASLIP*TSNSPSVNWGQVLF
Trigger: GAACAGCACTTGTCCCCAATTCACAGATGGCGAATTAGAGGTCCAGGGAATTAAACTCGCAGACACCATTTGTTGAAGACTTATTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR GCA 90 bp CGGCTGCCGCCTCCTGGGCAGGGCCGCGCTGGACCGAGGTGGGTGGGGGCATCATCGGTGCCTCTGTCCTaGCTCCTTCAAGTGGGGCCC +
Preference number: 2 (lower is better)
Translates to: RLPPPGQGRAGPRWVGASSVPLS*LLQVGP
Trigger: GGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA...TGATGCCCCCACCCACCTCGGTCCAGCGCGGCCCTGCCCAGGAGGCGGCAGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CAA 90 bp CCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTaGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: PGRTTLPEGQLWSQR*VPLGFLSPLFLLGG
Trigger: GCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR GCA 90 bp TCCAAACAGTCTCCGACCCTGAGAGGGCCTTGCACCCATTCCCCAGGCAGACACGCGCCCGCGCCTCAGTaGCCACAGCAAACTCCAGCA +
Preference number: 2 (lower is better)
Translates to: SKQSPTLRGPCTHSPGRHAPAPQ*PQQTPA
Trigger: TGCTGGAGTTTGCTGTGGGCACTGAGGCGCGGGCGC...GTGTCTGCCTGGGGAATGGGTGCAAGGCCCTCTCAGGGTCGGAGACTGTTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp GGGCATCAGGGCCCCGCAGCACGCCCCTCTCCAGCTTCGCATCAGGGCGAGGGGTCCTCAGCCGCGTTTTaGTTGCAACTCATGGCTTTT +
Preference number: 2 (lower is better)
Translates to: GHQGPAARPSPASHQGEGSSAAF*LQLMAF
Trigger: AAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGA...CCCCTCGCCCTGATGCGAAGCTGGAGAGGGGCGTGCTGCGGGGCCCTGATGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR TCA 90 bp TCCAAACAGTCTCCGACCCTGAGAGGGCCTTGCACCCATTCCCCAGGCAGACACGGATGGGTGCCCTGGTaGAGAGGCCAGAGAAGAGCC +
Preference number: 2 (lower is better)
Translates to: SKQSPTLRGPCTHSPGRHGWVPW*RGQRRA
Trigger: GGCTCTTCTCTGGCCTCTTCACCAGGGCACCCATCC...GTGTCTGCCTGGGGAATGGGTGCAAGGCCCTCTCAGGGTCGGAGACTGTTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp GGTGGAGGGAAACTGAGAGGAGTGAGCGAGGGAGGGATCACAGGTGTGTTAATCCCAGGGCTGCCTCGTTaGGCGTCTCCCTGGCCTCGG +
Preference number: 2 (lower is better)
Translates to: GGGKLRGVSEGGITGVLIPGLPR*ASPWPR
Trigger: CCGAGGCCAGGGAGACGCCCAACGAGGCAGCCCTGG...GATTAACACACCTGTGATCCCTCCCTCGCTCACTCCTCTCAGTTTCCCTCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CAA 90 bp TTCAAGTGGGGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTaGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTT +
Preference number: 2 (lower is better)
Translates to: FKWGPRQDNPTRGST*VSALGPSGFPQPAL
Trigger: AAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCCCCACTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR GCA 90 bp GGGCATCAGGGCCCCGCAGCACGCCCCTCTCCAGCTTCGCATCAGGGCGAGGGGTTGTACAGTTTTTCATaGACCAAAGGAAGGGCCATC +
Preference number: 2 (lower is better)
Translates to: GHQGPAARPSPASHQGEGLYSFS*TKGRAI
Trigger: GATGGCCCTTCCTTTGGTGCATGAAAAACTGTACAA...CCCCTCGCCCTGATGCGAAGCTGGAGAGGGGCGTGCTGCGGGGCCCTGATGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR GCA 90 bp CTGGCCACCCCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCGCGCCCGCGCCTCAGTaGCCACAGCAAACTCCAGCA +
Preference number: 2 (lower is better)
Translates to: LATPDTQRLQYLGVTHNGAPAPQ*PQQTPA
Trigger: TGCTGGAGTTTGCTGTGGGCACTGAGGCGCGGGCGC...GCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGGGGTGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp AGGATTACAGCGCGAGGGGTTCCTGATGCAGAACTGACACTGCCTCACCTGCATCGTTGGGCGTCTCCCTaGCCTCGGTGCCTCTGTCCT +
Preference number: 2 (lower is better)
Translates to: RITARGVPDAELTLPHLHRWASP*PRCLCP
Trigger: AGGACAGAGGCACCGAGGCCAGGGAGACGCCCAACG...ATGCAGGTGAGGCAGTGTCAGTTCTGCATCAGGAACCCCTCGCGCTGTAATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp CTGGTGAGGAAGGCTCCGCACAGCACAAGTCACTGGTGTGGTGACTTTGGAAGACGTTGGGCGTCTCCCTaGCCTCGGTGCCTCTGTCCT +
Preference number: 2 (lower is better)
Translates to: LVRKAPHSTSHWCGDFGRRWASP*PRCLCP
Trigger: AGGACAGAGGCACCGAGGCCAGGGAGACGCCCAACG...TCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTGCGGAGCCTTCCTCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR GCA 90 bp GAACAGGCCTATAGCAGAGGCTCCAAACAGTCTCCGACCCTGAGAGGGCCTTGCCATTCGGTGAGTATGTaGTTTGGAAGGGCGCCCGCG +
Preference number: 2 (lower is better)
Translates to: EQAYSRGSKQSPTLRGPCHSVSM*FGRAPA
Trigger: CGCGGGCGCCCTTCCAAAGCACATACTCACCGAATG...GCAAGGCCCTCTCAGGGTCGGAGACTGTTTGGAGCCTCTGCTATAGGCCTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp CCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTaGGTGGCTGATCTGAGTTTC +
Preference number: 2 (lower is better)
Translates to: PYPRVNFGLSAWSLWVSSARSSS*VADLSF
Trigger: GAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGC...TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp CTTCTGCCACAGCTGACAGTGAGAGGACCAGGTCCTGTTTCTAGGGCGGGGTGCTGTTCGGAGGTTCCTTaGATGGGTGCCCTGGTGAAG +
Preference number: 2 (lower is better)
Translates to: LLPQLTVRGPGPVSRAGCCSEVP*MGALVK
Trigger: CTTCACCAGGGCACCCATCCAAGGAACCTCCGAACA...GCACCCCGCCCTAGAAACAGGACCTGGTCCTCTCACTGTCAGCTGTGGCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp GAGGCCCCACAAGGGCAAGACTTAGGTCTGTTTCATCCTCCAGTGAATTCTCAGAAACTCCAGCAGGGCTaGCGAGGGTGCGCCCGGCTG +
Preference number: 2 (lower is better)
Translates to: EAPQGQDLGLFHPPVNSQKLQQG*RGCARL
Trigger: CAGCCGGGCGCACCCTCGCCAGCCCTGCTGGAGTTT...CTGAGAATTCACTGGAGGATGAAACAGACCTAAGTCTTGCCCTTGTGGGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR TCA 90 bp GGGAAGCCACAGCCAGTGGCACACGGCAGTCCTGTAAGAACATCCACTAGGTCAACAGCAGGCACTGAGTaGATGCCACTGAGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: GKPQPVAHGSPVRTSTRSTAGTE*MPLSCS
Trigger: GGAGCAGCTCAGTGGCATTCACTCAGTGCCTGCTGT...TGACCTAGTGGATGTTCTTACAGGACTGCCGTGTGCCACTGGCTGTGGCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp ATCTGCAGAGTGAGCGAACACTCTGACTGCTCTCAAAATAGTAACTGCAGGTGGCCAGGGCTGCCTCGTTaGGCGTCTCCCTGGCCTCGG +
Preference number: 2 (lower is better)
Translates to: ICRVSEHSDCSQNSNCRWPGLPR*ASPWPR
Trigger: CCGAGGCCAGGGAGACGCCCAACGAGGCAGCCCTGG...CCACCTGCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCTCACTCTGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp CTTCTGCCACAGCTGACAGTGAGAGGACCAGGTCCTGTTTCTAGGGCGGGGTGCGCCTCGTCCACAATTTaGGAAGCAACCCAGGTTCAC +
Preference number: 2 (lower is better)
Translates to: LLPQLTVRGPGPVSRAGCASSTI*EATQVH
Trigger: GTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGC...GCACCCCGCCCTAGAAACAGGACCTGGTCCTCTCACTGTCAGCTGTGGCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CAA 90 bp GGGGGCAGAGAAGCCATCCACACCCTTCCCTGGGTCAGACACACATaGACCAGGGTAGTTGGTTCACTCTGTGATCATGGGACAACCTGG +
Preference number: 2 (lower is better)
Translates to: GGREAIHTLPWVRHT*TRVVGSLCDHGTTW
Trigger: CCAGGTTGTCCCATGATCACAGAGTGAACCAACTACCCTGGTCAATGTGTGTCTGACCCAGGGAAGGGTGTGGATGGCTTCTCTGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR TCA 90 bp GAACAGGCCTATAGCAGAGGCTCCAAACAGTCTCCGACCCTGAGAGGGCCTTGCGTTGCAGTTTCATTCTaGGTTCCATCCTCAGCCGCG +
Preference number: 2 (lower is better)
Translates to: EQAYSRGSKQSPTLRGPCVAVSF*VPSSAA
Trigger: CGCGGCTGAGGATGGAACTCAGAATGAAACTGCAAC...GCAAGGCCCTCTCAGGGTCGGAGACTGTTTGGAGCCTCTGCTATAGGCCTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR TCA 90 bp TCTGCCCATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTCGCCTTCCTCATGCGTaGCATGCCTTGAGAACTGCC +
Preference number: 2 (lower is better)
Translates to: SAHPRRPRPQFGKQPRFTRLPHA*HALRTA
Trigger: GGCAGTTCTCAAGGCATGTCACGCATGAGGAAGGCG...AGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATGGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp TCTGCCCATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTCCCGAGGGTCAACTTTaGTCTCAGCGCTTGGTCCCT +
Preference number: 2 (lower is better)
Translates to: SAHPRRPRPQFGKQPRFTPEGQL*SQRLVP
Trigger: AGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGG...AGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATGGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp TCTGAGTTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTCCTGCCTCCTTCAAGTaGGGCCCCAGGCAGGACAAC +
Preference number: 2 (lower is better)
Translates to: SEFHPQPRFGCNSWLFLAPASFK*GPRQDN
Trigger: GTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGG...AGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAACTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR TCA 90 bp TGTTGTGAAAATGAACAGGCCTATAGCAGAGGCTCCAAACAGTCTCCGACCCTGGGATGGGTGCCCTGGTaGAGAGGCCAGAGAAGAGCC +
Preference number: 2 (lower is better)
Translates to: CCENEQAYSRGSKQSPTLGWVPW*RGQRRA
Trigger: GGCTCTTCTCTGGCCTCTTCACCAGGGCACCCATCC...CAGGGTCGGAGACTGTTTGGAGCCTCTGCTATAGGCCTGTTCATTTTCACAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR TCA 90 bp CATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCGCCTTCCTCATGCGTaGCATGCCTTGAGAACTGCC +
Preference number: 2 (lower is better)
Translates to: HPRRPRPQFGKQPRFTAVRLPHA*HALRTA
Trigger: GGCAGTTCTCAAGGCATGTCACGCATGAGGAAGGCG...AACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp ACAAGTGCTGTTCCCTGGCAAGGCTGCCATGAAGACGAAATGAGACAACTTATGCGTTGGGCGTCTCCCTaGCCTCGGTGCCTCTGTCCT +
Preference number: 2 (lower is better)
Translates to: TSAVPWQGCHEDEMRQLMRWASP*PRCLCP
Trigger: AGGACAGAGGCACCGAGGCCAGGGAGACGCCCAACG...CATAAGTTGTCTCATTTCGTCTTCATGGCAGCCTTGCCAGGGAACAGCACTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp CTGGTGAGGAAGGCTCCGCACAGCACAAGTCACTGGTGTGGTGACTTTGGAAGAAAGGGTTTACAAGGATaGAAATGCACCCCGCCCCCG +
Preference number: 2 (lower is better)
Translates to: LVRKAPHSTSHWCGDFGRKGLQG*KCTPPP
Trigger: CGGGGGCGGGGTGCATTTCCATCCTTGTAAACCCTT...TCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTGCGGAGCCTTCCTCACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR TCA 90 bp CTGGTGAGGAAGGCTCCGCACAGCACAAGTCACTGGTGTGGTGACTTTGGAAGAGTTGCAGTTTCATTCTaGGTTCCATCCTCAGCCGCG +
Preference number: 2 (lower is better)
Translates to: LVRKAPHSTSHWCGDFGRVAVSF*VPSSAA
Trigger: CGCGGCTGAGGATGGAACTCAGAATGAAACTGCAAC...TCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTGCGGAGCCTTCCTCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR TCA 90 bp AGGATTACAGCGCGAGGGGTTCCTGATGCAGAACTGACACTGCCTCACCTGCATGTTGCAGTTTCATTCTaGGTTCCATCCTCAGCCGCG +
Preference number: 2 (lower is better)
Translates to: RITARGVPDAELTLPHLHVAVSF*VPSSAA
Trigger: CGCGGCTGAGGATGGAACTCAGAATGAAACTGCAAC...ATGCAGGTGAGGCAGTGTCAGTTCTGCATCAGGAACCCCTCGCGCTGTAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR GCA 90 bp TACAGGACTGAGTACTATGAAGGGTTTACAAGGATGGAAATGCACCCCGCCCCCGGTTCCTTGGATGGGTaGCCTGGTGAAGAGGCCAGA +
Preference number: 2 (lower is better)
Translates to: YRTEYYEGFTRMEMHPAPGSLDG*PGEEAR
Trigger: TCTGGCCTCTTCACCAGGGCACCCATCCAAGGAACC...GGGGGCGGGGTGCATTTCCATCCTTGTAAACCCTTCATAGTACTCAGTCCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR GCA 90 bp CTGGTGAGGAAGGCTCCGCACAGCACAAGTCACTGGTGTGGTGACTTTGGAAGAACATGCCTTGAGAACTaGCGAGTGCCAGGTACACAG +
Preference number: 2 (lower is better)
Translates to: LVRKAPHSTSHWCGDFGRTCLEN*RVPGTQ
Trigger: CTGTGTACCTGGCACTCGGCAGTTCTCAAGGCATGT...TCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTGCGGAGCCTTCCTCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp TCTGAGTTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTGCCCGCTCTTCCTCCTaGGTGGCTGATCTGAGTTTC +
Preference number: 2 (lower is better)
Translates to: SEFHPQPRFGCNSWLFLAARSSS*VADLSF
Trigger: GAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGC...AGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAACTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp TCTGCCCATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTTTTGGTCTCAGCGCTTaGTCCCTCTGGGTTTCCTCA +
Preference number: 2 (lower is better)
Translates to: SAHPRRPRPQFGKQPRFTFGLSA*SLWVSS
Trigger: TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAA...AGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATGGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp ATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCAAGGGTTTACAAGGATaGAAATGCACCCCGCCCCCG +
Preference number: 2 (lower is better)
Translates to: IPEGLVHNLGSNPGSLLFKGLQG*KCTPPP
Trigger: CGGGGGCGGGGTGCATTTCCATCCTTGTAAACCCTT...GAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp CTGGTGAGGAAGGCTCCGCACAGCACAAGTCACTGGTGTGGTGACTTTGGAAGAAGAGTCACAGGCCTCTaGAGGGAGAGTTCAAACACC +
Preference number: 2 (lower is better)
Translates to: LVRKAPHSTSHWCGDFGRRVTGL*RESSNT
Trigger: GGTGTTTGAACTCTCCCTCCAGAGGCCTGTGACTCT...TCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTGCGGAGCCTTCCTCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp TTCTTGTACATTTCCTTTTGCCCCTGTGCTAGAGTTCCTCCCAAGACTAGGAGGTGCTCCGGCCCTGGGTaGCAGGGATTCAGCTGTCGA +
Preference number: 2 (lower is better)
Translates to: FLYISFCPCARVPPKTRRCSGPG*QGFSCR
Trigger: TCGACAGCTGAATCCCTGCCACCCAGGGCCGGAGCA...CCTCCTAGTCTTGGGAGGAACTCTAGCACAGGGGCAAAAGGAAATGTACAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
3UTR-3UTR CCA 90 bp CTGGTGAGGAAGGCTCCGCACAGCACAAGTCACTGGTGTGGTGACTTTGGAAGAGCCTCGTCCACAATTTaGGAAGCAACCCAGGTTCAC +
Preference number: 2 (lower is better)
Translates to: LVRKAPHSTSHWCGDFGRASSTI*EATQVH
Trigger: GTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGC...TCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTGCGGAGCCTTCCTCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR TCA 90 bp GGTGGAGGGAAACTGAGAGGAGTGAGCGAGGGAGGGATCACAGGTGTGTTAATCCTGGCAAGGCTGCCATaGAGACGAAATGAGACAACT +
Preference number: 2 (lower is better)
Translates to: GGGKLRGVSEGGITGVLILARLP*RRNETT
Trigger: AGTTGTCTCATTTCGTCTTCATGGCAGCCTTGCCAG...GATTAACACACCTGTGATCCCTCCCTCGCTCACTCCTCTCAGTTTCCCTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR GCA 90 bp CAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTTGTACAGTTTTTCATaGACCAAAGGAAGGGCCATC +
Preference number: 2 (lower is better)
Translates to: QAGQPYPRVNFGLSAWSLLYSFS*TKGRAI
Trigger: GATGGCCCTTCCTTTGGTGCATGAAAAACTGTACAA...GAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR GCA 90 bp TTCTTGTACATTTCCTTTTGCCCCTGTGCTAGAGTTCCTCCCAAGACTAGGAGGTTACAAGGATGGAAATaGACCCCGCCCCCGCCCTGG +
Preference number: 2 (lower is better)
Translates to: FLYISFCPCARVPPKTRRLQGWK*TPPPPW
Trigger: CCAGGGCGGGGGCGGGGTGCATTTCCATCCTTGTAA...CCTCCTAGTCTTGGGAGGAACTCTAGCACAGGGGCAAAAGGAAATGTACAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
3UTR-3UTR GCA 90 bp CATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTACATGCCTTGAGAACTaGCGAGTGCCAGGTACACAG +
Preference number: 2 (lower is better)
Translates to: HPRRPRPQFGKQPRFTAVTCLEN*RVPGTQ
Trigger: CTGTGTACCTGGCACTCGGCAGTTCTCAAGGCATGT...AACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp TACAGGACTGAGTACTATGAAGGGTTTACAAGGATGGAAATGCACCCCGCCCCCTGTTCGGAGGTTCCTTaGATGGGTGCCCTGGTGAAG +
Preference number: 2 (lower is better)
Translates to: YRTEYYEGFTRMEMHPAPCSEVP*MGALVK
Trigger: CTTCACCAGGGCACCCATCCAAGGAACCTCCGAACA...GGGGGCGGGGTGCATTTCCATCCTTGTAAACCCTTCATAGTACTCAGTCCTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CAA 90 bp CAGGTGGGTTGCAGTTTCATTCTGAGTTCCATCCTCAGCCGCGTTTaGGTTGCAACTCATGGCTTTTCCTGGCTGTTCGGAGGTTCCTTG +
Preference number: 2 (lower is better)
Translates to: QVGCSFILSSILSRV*VATHGFSWLFGGSL
Trigger: CAAGGAACCTCCGAACAGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAACTCAGAATGAAACTGCAACCCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CAA 90 bp CACCATTCTCCACTTCTGCCCATCCCAGAAGGCCTCGTCCACAATTaGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCAT +
Preference number: 2 (lower is better)
Translates to: HHSPLLPIPEGLVHN*GSNPGSLLFLTRSH
Trigger: ATGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATGGGCAGAAGTGGAGAATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR TCA 90 bp CTGGCCACCCCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCTCTGTAAACATTCGGTaGGTATGTGCTTTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: LATPDTQRLQYLGVTHNGSVNIR*VCALEG
Trigger: CCCTTCCAAAGCACATACTCACCGAATGTTTACAGA...GCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGGGGTGGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR TCA 90 bp GGGAAGCCACAGCCAGTGGCACACGGCAGTCCTGTAAGAACATCCACTAGGTCATCTGTAAACATTCGGTaGGTATGTGCTTTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: GKPQPVAHGSPVRTSTRSSVNIR*VCALEG
Trigger: CCCTTCCAAAGCACATACTCACCGAATGTTTACAGA...TGACCTAGTGGATGTTCTTACAGGACTGCCGTGTGCCACTGGCTGTGGCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR TCA 90 bp CAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCATCACCAAACAGTCTCCGACCCTaGGAGGGCCTTGCACCCATT +
Preference number: 2 (lower is better)
Translates to: QFGKQPRFTAVLDTKSSPNSLRP*EGLAPI
Trigger: AATGGGTGCAAGGCCCTCTCAGGGTCGGAGACTGTT...TGGTGATGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR TCA 90 bp ACAAGTGCTGTTCCCTGGCAAGGCTGCCATGAAGACGAAATGAGACAACTTATGAACAGTCTCCGACCCTaGGAGGGCCTTGCACCCATT +
Preference number: 2 (lower is better)
Translates to: TSAVPWQGCHEDEMRQLMNSLRP*EGLAPI
Trigger: AATGGGTGCAAGGCCCTCTCAGGGTCGGAGACTGTT...CATAAGTTGTCTCATTTCGTCTTCATGGCAGCCTTGCCAGGGAACAGCACTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR TCA 90 bp AGGATTACAGCGCGAGGGGTTCCTGATGCAGAACTGACACTGCCTCACCTGCATCTAATTCGCCATCTGTaGATTGGGGACAAGTGCTGT +
Preference number: 2 (lower is better)
Translates to: RITARGVPDAELTLPHLHLIRHL*IGDKCC
Trigger: ACAGCACTTGTCCCCAATTCACAGATGGCGAATTAG...ATGCAGGTGAGGCAGTGTCAGTTCTGCATCAGGAACCCCTCGCGCTGTAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR GCA 90 bp CCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGTTGTACAGTTTTTCATaGACCAAAGGAAGGGCCATC +
Preference number: 2 (lower is better)
Translates to: PTRGSTLVSALGPSGFPQLYSFS*TKGRAI
Trigger: GATGGCCCTTCCTTTGGTGCATGAAAAACTGTACAA...CTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR GCA 90 bp CAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCATCACCAGGTTCCTTGGATGGGTaGCCTGGTGAAGAGGCCAGA +
Preference number: 2 (lower is better)
Translates to: QFGKQPRFTAVLDTKSSPGSLDG*PGEEAR
Trigger: TCTGGCCTCTTCACCAGGGCACCCATCCAAGGAACC...TGGTGATGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp TCTGAGTTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTTTTGGTCTCAGCGCTTaGTCCCTCTGGGTTTCCTCA +
Preference number: 2 (lower is better)
Translates to: SEFHPQPRFGCNSWLFLAFGLSA*SLWVSS
Trigger: TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAA...AGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAACTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp CTGGTGAGGAAGGCTCCGCACAGCACAAGTCACTGGTGTGGTGACTTTGGAAGACACAACGGCCGTAACTaGTGGCTATCTGTTCATAAC +
Preference number: 2 (lower is better)
Translates to: LVRKAPHSTSHWCGDFGRHNGRN*WLSVHN
Trigger: GTTATGAACAGATAGCCACCAGTTACGGCCGTTGTG...TCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTGCGGAGCCTTCCTCACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp CATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTTCGCCATCTGTGAATTaGGGACAAGTGCTGTTCCCT +
Preference number: 2 (lower is better)
Translates to: HPRRPRPQFGKQPRFTAVSPSVN*GQVLFP
Trigger: AGGGAACAGCACTTGTCCCCAATTCACAGATGGCGA...AACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CAA 90 bp GGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTaGACACGAAGTCATCACCAGCAACTAGTTATCCTAAGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: GLVHNLGSNPGSLLF*TRSHHQQLVILSPG
Trigger: CCCTGGACTTAGGATAACTAGTTGCTGGTGATGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR GCA 90 bp AACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTTTGTACAGTTTTTCATaGACCAAAGGAAGGGCCATC +
Preference number: 2 (lower is better)
Translates to: NPTRGSTLVSALGPSGFPLYSFS*TKGRAI
Trigger: GATGGCCCTTCCTTTGGTGCATGAAAAACTGTACAA...AGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR GCA 90 bp GGAGTTACACACAACGGCCGTAACTGGTGGCTATCTGTTCATAACAAACAAACCGGTTCCTTGGATGGGTaGCCTGGTGAAGAGGCCAGA +
Preference number: 2 (lower is better)
Translates to: GVTHNGRNWWLSVHNKQTGSLDG*PGEEAR
Trigger: TCTGGCCTCTTCACCAGGGCACCCATCCAAGGAACC...GGTTTGTTTGTTATGAACAGATAGCCACCAGTTACGGCCGTTGTGTGTAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR GCA 90 bp GGGAAGCCACAGCCAGTGGCACACGGCAGTCCTGTAAGAACATCCACTAGGTCATCAACAAATGGTGTCTaGGAGTTTAATTCCCTGGAC +
Preference number: 2 (lower is better)
Translates to: GKPQPVAHGSPVRTSTRSSTNGV*EFNSLD
Trigger: GTCCAGGGAATTAAACTCGCAGACACCATTTGTTGA...TGACCTAGTGGATGTTCTTACAGGACTGCCGTGTGCCACTGGCTGTGGCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp AGGATTACAGCGCGAGGGGTTCCTGATGCAGAACTGACACTGCCTCACCTGCATGCGAGTTTAATTCCCTaGACCTCTAATTCGCCATCT +
Preference number: 2 (lower is better)
Translates to: RITARGVPDAELTLPHLHASLIP*TSNSPS
Trigger: AGATGGCGAATTAGAGGTCCAGGGAATTAAACTCGC...ATGCAGGTGAGGCAGTGTCAGTTCTGCATCAGGAACCCCTCGCGCTGTAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR TCA 90 bp CCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCCGTAACTGGTCTGTAAACATTCGGTaGGTATGTGCTTTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: PDTQRLQYLGVTHNGRNWSVNIR*VCALEG
Trigger: CCCTTCCAAAGCACATACTCACCGAATGTTTACAGA...CCAGTTACGGCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp GAAGACGAAATGAGACAACTTATGGAGCAAGCACAGGATTCACTCCTTACTGGAGCCCGCTCTTCCTCCTaGGTGGCTGATCTGAGTTTC +
Preference number: 2 (lower is better)
Translates to: EDEMRQLMEQAQDSLLTGARSSS*VADLSF
Trigger: GAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGC...TCCAGTAAGGAGTGAATCCTGTGCTTGCTCCATAAGTTGTCTCATTTCGTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp GGAGTTACACACAACGGCCGTAACTGGTGGCTATCTGTTCATAACAAACAAACCTGTTCGGAGGTTCCTTaGATGGGTGCCCTGGTGAAG +
Preference number: 2 (lower is better)
Translates to: GVTHNGRNWWLSVHNKQTCSEVP*MGALVK
Trigger: CTTCACCAGGGCACCCATCCAAGGAACCTCCGAACA...GGTTTGTTTGTTATGAACAGATAGCCACCAGTTACGGCCGTTGTGTGTAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp AAGTCCACTTCATTTTTCTCATGGCTTGAAAAATATCAAAGGATTACAGCGCGAAAACTCCAGCAGGGCTaGCGAGGGTGCGCCCGGCTG +
Preference number: 2 (lower is better)
Translates to: KSTSFFSWLEKYQRITARKLQQG*RGCARL
Trigger: CAGCCGGGCGCACCCTCGCCAGCCCTGCTGGAGTTT...TCGCGCTGTAATCCTTTGATATTTTTCAAGCCATGAGAAAAATGAAGTGGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp TCTGCCCATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGGAGTCAAGTTTAGTTaGGTAAACTGTAGCCTTTGC +
Preference number: 2 (lower is better)
Translates to: SAHPRRPRPQFGKQPRFTGVKFS*VNCSLC
Trigger: GCAAAGGCTACAGTTTACCCAACTAAACTTGACTCC...AGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATGGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp TTCTTGTACATTTCCTTTTGCCCCTGTGCTAGAGTTCCTCCCAAGACTAGGAGGGTCACACATGCACAGTaGCAGGTGCCCAGAAGAAAC +
Preference number: 2 (lower is better)
Translates to: FLYISFCPCARVPPKTRRVTHAQ*QVPRRN
Trigger: GTTTCTTCTGGGCACCTGCCACTGTGCATGTGTGAC...CCTCCTAGTCTTGGGAGGAACTCTAGCACAGGGGCAAAAGGAAATGTACAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
3UTR CAA 90 bp GGGAGAGTTCAAACACCAGCTCTATCCCTTGCTAGCTGGGTTACCTaGGATAAGTCGCTTACCTTCTCTGAGCCTCAGTTAAACCATCTG +
Preference number: 2 (lower is better)
Translates to: GRVQTPALSLASWVT*DKSLTFSEPQLNHL
Trigger: CAGATGGTTTAACTGAGGCTCAGAGAAGGTAAGCGACTTATCCAAGGTAACCCAGCTAGCAAGGGATAGAGCTGGTGTTTGAACTCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CAA 90 bp AGACTGACAATAACATCTTGGCTCTGCCACCTAACACCTGTGACCTaGGGCAGGTTACCTCTTCTGTGTGCCTCGGTTTTCTCATCTGTA +
Preference number: 2 (lower is better)
Translates to: RLTITSWLCHLTPVT*GRLPLLCASVFSSV
Trigger: TACAGATGAGAAAACCGAGGCACACAGAAGAGGTAACCTGCCCAAGGTCACAGGTGTTAGGTGGCAGAGCCAAGATGTTATTGTCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR TCA 90 bp CAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCATCACCACTGGCAAGGCTGCCATaGAGACGAAATGAGACAACT +
Preference number: 2 (lower is better)
Translates to: QFGKQPRFTAVLDTKSSPLARLP*RRNETT
Trigger: AGTTGTCTCATTTCGTCTTCATGGCAGCCTTGCCAG...TGGTGATGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR GCA 90 bp CATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTGTAAACTGTAGCCTTTaGAAGCTTCAGTATACAAGG +
Preference number: 2 (lower is better)
Translates to: HPRRPRPQFGKQPRFTAVVNCSL*KLQYTR
Trigger: CCTTGTATACTGAAGCTTGCAAAGGCTACAGTTTAC...AACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp ATCTGCAGAGTGAGCGAACACTCTGACTGCTCTCAAAATAGTAACTGCAGGTGGTCCTCAGCCGCGTTTTaGTTGCAACTCATGGCTTTT +
Preference number: 2 (lower is better)
Translates to: ICRVSEHSDCSQNSNCRWSSAAF*LQLMAF
Trigger: AAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGA...CCACCTGCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCTCACTCTGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp TACAGGACTGAGTACTATGAAGGGTTTACAAGGATGGAAATGCACCCCGCCCCCAACGGCCGTAACTGGTaGCTATCTGTTCATAACAAA +
Preference number: 2 (lower is better)
Translates to: YRTEYYEGFTRMEMHPAPNGRNW*LSVHNK
Trigger: TTTGTTATGAACAGATAGCCACCAGTTACGGCCGTT...GGGGGCGGGGTGCATTTCCATCCTTGTAAACCCTTCATAGTACTCAGTCCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp CAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCATCACCACACAACGGCCGTAACTaGTGGCTATCTGTTCATAAC +
Preference number: 2 (lower is better)
Translates to: QFGKQPRFTAVLDTKSSPHNGRN*WLSVHN
Trigger: GTTATGAACAGATAGCCACCAGTTACGGCCGTTGTG...TGGTGATGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR TCA 90 bp AATCCATATTCTTACCAACACATACTTGTTTCTGCCCATCTGATAGCTAAAGCGACAGCAGGCACTGAGTaGATGCCACTGAGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: NPYSYQHILVSAHLIAKATAGTE*MPLSCS
Trigger: GGAGCAGCTCAGTGGCATTCACTCAGTGCCTGCTGT...CGCTTTAGCTATCAGATGGGCAGAAACAAGTATGTGTTGGTAAGAATATGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
3UTR-3UTR GCA 90 bp CGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCATTGTACAGTTTTTCATaGACCAAAGGAAGGGCCATC +
Preference number: 2 (lower is better)
Translates to: RPQFGKQPRFTAVLDTKSLYSFS*TKGRAI
Trigger: GATGGCCCTTCCTTTGGTGCATGAAAAACTGTACAA...TGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp GGAGTTACACACAACGGCCGTAACTGGTGGCTATCTGTTCATAACAAACAAACCTCCTCAGCCGCGTTTTaGTTGCAACTCATGGCTTTT +
Preference number: 2 (lower is better)
Translates to: GVTHNGRNWWLSVHNKQTSSAAF*LQLMAF
Trigger: AAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGA...GGTTTGTTTGTTATGAACAGATAGCCACCAGTTACGGCCGTTGTGTGTAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp CAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCATCACCAGCGAGTTTAATTCCCTaGACCTCTAATTCGCCATCT +
Preference number: 2 (lower is better)
Translates to: QFGKQPRFTAVLDTKSSPASLIP*TSNSPS
Trigger: AGATGGCGAATTAGAGGTCCAGGGAATTAAACTCGC...TGGTGATGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CCA 90 bp AATCCATATTCTTACCAACACATACTTGTTTCTGCCCATCTGATAGCTAAAGCGGCCTCGTCCACAATTTaGGAAGCAACCCAGGTTCAC +
Preference number: 2 (lower is better)
Translates to: NPYSYQHILVSAHLIAKAASSTI*EATQVH
Trigger: GTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGC...CGCTTTAGCTATCAGATGGGCAGAAACAAGTATGTGTTGGTAAGAATATGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
3UTR-3UTR TCA 90 bp CAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCATCACCAAAACCATCTGTAAAATaGGAAGAATCGTGCCTAGTT +
Preference number: 2 (lower is better)
Translates to: QFGKQPRFTAVLDTKSSPKPSVK*EESCLV
Trigger: AACTAGGCACGATTCTTCTCATTTTACAGATGGTTT...TGGTGATGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR GCA 90 bp AAGTCCACTTCATTTTTCTCATGGCTTGAAAAATATCAAAGGATTACAGCGCGATCCTCATGCGTGACATaGCTTGAGAACTGCCGAGTG +
Preference number: 2 (lower is better)
Translates to: KSTSFFSWLEKYQRITARSSCVT*LENCRV
Trigger: CACTCGGCAGTTCTCAAGGCATGTCACGCATGAGGA...TCGCGCTGTAATCCTTTGATATTTTTCAAGCCATGAGAAAAATGAAGTGGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CAA 90 bp GTGCCTAGTTTGTGCTCTTGTGAGAAGGGAAGAGACTATGTCTGCTaGTCACAAAATAAGTCTTCAACAAATGGTGTCTGCGAGTTTAAT +
Preference number: 2 (lower is better)
Translates to: VPSLCSCEKGRDYVC*SQNKSSTNGVCEFN
Trigger: ATTAAACTCGCAGACACCATTTGTTGAAGACTTATTTTGTGACAAGCAGACATAGTCTCTTCCCTTCTCACAAGAGCACAAACTAGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR TCA 90 bp AATCCATATTCTTACCAACACATACTTGTTTCTGCCCATCTGATAGCTAAAGCGCAGGTTTTATGCACCTaGAGTCAGACTGACAATAAC +
Preference number: 2 (lower is better)
Translates to: NPYSYQHILVSAHLIAKAQVLCT*SQTDNN
Trigger: GTTATTGTCAGTCTGACTTCAGGTGCATAAAACCTG...CGCTTTAGCTATCAGATGGGCAGAAACAAGTATGTGTTGGTAAGAATATGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
3UTR-3UTR CCA 90 bp AATCCATATTCTTACCAACACATACTTGTTTCTGCCCATCTGATAGCTAAAGCGGGAGTCAAGTTTAGTTaGGTAAACTGTAGCCTTTGC +
Preference number: 2 (lower is better)
Translates to: NPYSYQHILVSAHLIAKAGVKFS*VNCSLC
Trigger: GCAAAGGCTACAGTTTACCCAACTAAACTTGACTCC...CGCTTTAGCTATCAGATGGGCAGAAACAAGTATGTGTTGGTAAGAATATGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
3UTR GCA 72 bp GTGAGTATGTGCTTTGGAAGGGCGCCCGCGCCTCAGTaGCCACAGCAAACTCCAGCAGGGCTGGCGAGGGTG +
Preference number: 3 (lower is better)
Translates to: VSMCFGRAPAPQ*PQQTPAGLARV
Trigger: CACCCTCGCCAGCCCTGCTGGAGTTTGCTGTGGGCACTGAGGCGCGGGCGCCCTTCCAAAGCACATACTCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 72 bp CCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTaGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCT +
Preference number: 3 (lower is better)
Translates to: PRVNFGLSAWSL*VSSARSSSWVA
Trigger: AGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 72 bp GCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTaGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGC +
Preference number: 3 (lower is better)
Translates to: APGRTTLPEGQL*SQRLVPLGFLS
Trigger: GCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR TCA 72 bp AGGCCTATAGCAGAGGCTCCAAACAGTCTCCGACCCTaGGAGGGCCTTGCACCCATTCCCCAGGCAGACACC +
Preference number: 3 (lower is better)
Translates to: RPIAEAPNSLRP*EGLAPIPQADT
Trigger: GGTGTCTGCCTGGGGAATGGGTGCAAGGCCCTCTCAGGGTCGGAGACTGTTTGGAGCCTCTGCTATAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR TCA 72 bp TTGAGAACTGCCGAGTGCCAGGTACACAGCAGGCACTaGGTGAATGCCACTGAGCTGCTCCGGCCCTGGGTG +
Preference number: 3 (lower is better)
Translates to: LRTAECQVHSRH*VNATELLRPWV
Trigger: CACCCAGGGCCGGAGCAGCTCAGTGGCATTCACTCAGTGCCTGCTGTGTACCTGGCACTCGGCAGTTCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 72 bp GGCTTTTCCTGGCTGTTCGGAGGTTCCTTGGATGGGTaGCCTGGTGAAGAGGCCAGAGAAGAGCCCAGGGCT +
Preference number: 3 (lower is better)
Translates to: GFSWLFGGSLDG*PGEEAREEPRA
Trigger: AGCCCTGGGCTCTTCTCTGGCCTCTTCACCAGGGCACCCATCCAAGGAACCTCCGAACAGCCAGGAAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 72 bp ACAGTGAGAGGACCAGGTCCTGTTTCTAGGGCGGGGTaGAGGGGAGTCCACACCAAGTGTGTTGGGTGGAGG +
Preference number: 3 (lower is better)
Translates to: TVRGPGPVSRAG*RGVHTKCVGWR
Trigger: CCTCCACCCAACACACTTGGTGTGGACTCCCCTGCACCCCGCCCTAGAAACAGGACCTGGTCCTCTCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 72 bp CAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTaGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: QPYPRVNFGLSA*SLWVSSARSSS
Trigger: GGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CAA 90 bp GGTGGAGGGAAACTGAGAGGAGTGAGCGAGGGAGGGATCACAGGTGTGTTAATCGACCCTGAGAGGGCCTaGCACCCATTCCCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: GGGKLRGVSEGGITGVLIDPERA*HPFPRQ
Trigger: CTGCCTGGGGAATGGGTGCAAGGCCCTCTCAGGGTC...GATTAACACACCTGTGATCCCTCCCTCGCTCACTCCTCTCAGTTTCCCTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 72 bp CCAGGACAGCCAGTCTGTAAACATTCGGTGAGTATGTaGTTTGGAAGGGCGCCCGCGCCTCAGTGCCCACAG +
Preference number: 3 (lower is better)
Translates to: PGQPVCKHSVSM*FGRAPAPQCPQ
Trigger: CTGTGGGCACTGAGGCGCGGGCGCCCTTCCAAAGCACATACTCACCGAATGTTTACAGACTGGCTGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CAA 90 bp ATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCGACCCTGAGAGGGCCTaGCACCCATTCCCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: IPEGLVHNLGSNPGSLLFDPERA*HPFPRQ
Trigger: CTGCCTGGGGAATGGGTGCAAGGCCCTCTCAGGGTC...GAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CAA 90 bp CTGGCCACCCCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCCTTTGGTCTCAGCGCTaGGTCCCTCTGGGTTTCCTC +
Preference number: 3 (lower is better)
Translates to: LATPDTQRLQYLGVTHNGLWSQR*VPLGFL
Trigger: GAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAG...GCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGGGGTGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CAA 90 bp GGGAAGCCACAGCCAGTGGCACACGGCAGTCCTGTAAGAACATCCACTAGGTCACTGTTCGGAGGTTCCTaGGATGGGTGCCCTGGTGAA +
Preference number: 3 (lower is better)
Translates to: GKPQPVAHGSPVRTSTRSLFGGS*DGCPGE
Trigger: TTCACCAGGGCACCCATCCAAGGAACCTCCGAACAG...TGACCTAGTGGATGTTCTTACAGGACTGCCGTGTGCCACTGGCTGTGGCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR TCA 72 bp AAGCCCTGCCAGGACAGCCAGTCTGTAAACATTCGGTaGGTATGTGCTTTGGAAGGGCGCCCGCGCCTCAGT +
Preference number: 3 (lower is better)
Translates to: KPCQDSQSVNIR*VCALEGRPRLS
Trigger: ACTGAGGCGCGGGCGCCCTTCCAAAGCACATACTCACCGAATGTTTACAGACTGGCTGTCCTGGCAGGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR TCA 72 bp GAGGAAGGCTCCGCACAGCACAAGTCACTGGTGTGGTaGCTTTGGAAGACAGCCCACCTGCACAGGCTAAGG +
Preference number: 3 (lower is better)
Translates to: EEGSAQHKSLVW*LWKTAHLHRLR
Trigger: CCTTAGCCTGTGCAGGTGGGCTGTCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTGCGGAGCCTTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 72 bp GTCCTGGTGAGGAAGGCTCCGCACAGCACAAGTCACTaGTGTGGTGACTTTGGAAGACAGCCCACCTGCACA +
Preference number: 3 (lower is better)
Translates to: VLVRKAPHSTSH*CGDFGRQPTCT
Trigger: TGTGCAGGTGGGCTGTCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTGCGGAGCCTTCCTCACCAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR TCA 72 bp CCCTCCTCTCCGCGGCCCTCCCAGGAGCACTCCCTATaGCTGATTGTGATATTGACAGCATTCTTGTGCAGG +
Preference number: 3 (lower is better)
Translates to: PSSPRPSQEHSL*LIVILTAFLCR
Trigger: CCTGCACAAGAATGCTGTCAATATCACAATCAGTCATAGGGAGTGCTCCTGGGAGGGCCGCGGAGAGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
3UTR CCA 72 bp ACACTGAGGCCCAGGGAGGGAATGATGCATCCAGCATaGCTGGTTGTGACCAGTCAGGAGCTGAACAGATCC +
Preference number: 3 (lower is better)
Translates to: TLRPREGMMHPA*LVVTSQELNRS
Trigger: GGATCTGTTCAGCTCCTGACTGGTCACAACCAGCCATGCTGGATGCATCATTCCCTCCCTGGGCCTCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
3UTR GCA 72 bp CTAAAAACACCTCTCCCGCCTTCCTCATGCGTGACATaGCTTGAGAACTGCCGAGTGCCAGGTACACAGCAG +
Preference number: 3 (lower is better)
Translates to: LKTPLPPSSCVT*LENCRVPGTQQ
Trigger: CTGCTGTGTACCTGGCACTCGGCAGTTCTCAAGGCATGTCACGCATGAGGAAGGCGGGAGAGGTGTTTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 72 bp ATAGTTGAAGTTGAAGTCCAGCGTCCTACTTACCCTTaGAGTGGCATCCCTAGTTCCCTCCTCTCCGCGGCC +
Preference number: 3 (lower is better)
Translates to: IVEVEVQRPTYP*SGIPSSLLSAA
Trigger: GGCCGCGGAGAGGAGGGAACTAGGGATGCCACTGCAAGGGTAAGTAGGACGCTGGACTTCAACTTCAACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
3UTR-3UTR CAA 90 bp TCTGAGTTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTCTTTGGTCTCAGCGCTaGGTCCCTCTGGGTTTCCTC +
Preference number: 3 (lower is better)
Translates to: SEFHPQPRFGCNSWLFLALWSQR*VPLGFL
Trigger: GAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAG...AGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAACTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CAA 90 bp TACAGGACTGAGTACTATGAAGGGTTTACAAGGATGGAAATGCACCCCGCCCCCCTGTTCGGAGGTTCCTaGGATGGGTGCCCTGGTGAA +
Preference number: 3 (lower is better)
Translates to: YRTEYYEGFTRMEMHPAPLFGGS*DGCPGE
Trigger: TTCACCAGGGCACCCATCCAAGGAACCTCCGAACAG...GGGGGCGGGGTGCATTTCCATCCTTGTAAACCCTTCATAGTACTCAGTCCTGTA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CAA 90 bp GGGAAGCCACAGCCAGTGGCACACGGCAGTCCTGTAAGAACATCCACTAGGTCATCAGCCGCGTTTTGGTaGCAACTCATGGCTTTTCCT +
Preference number: 3 (lower is better)
Translates to: GKPQPVAHGSPVRTSTRSSAAFW*QLMAFP
Trigger: AGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGA...TGACCTAGTGGATGTTCTTACAGGACTGCCGTGTGCCACTGGCTGTGGCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CAA 90 bp TCTGCCCATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTTTCGCCATCTGTGAATaGGGGACAAGTGCTGTTCCC +
Preference number: 3 (lower is better)
Translates to: SAHPRRPRPQFGKQPRFTFAICE*GTSAVP
Trigger: GGGAACAGCACTTGTCCCCAATTCACAGATGGCGAA...AGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATGGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR TCA 72 bp TCCTATTCAACCATGAGGACAATCATAGTGGGTTGGTaGCAGGAGGAGAGTCACAGGCCTCTGGAGGGAGAG +
Preference number: 3 (lower is better)
Translates to: SYSTMRTIIVGW*QEESHRPLEGE
Trigger: CTCTCCCTCCAGAGGCCTGTGACTCTCCTCCTGTCACCAACCCACTATGATTGTCCTCATGGTTGAATAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 72 bp GGGCCTGGCACACACAACAGGCCCTCAGAAAACATCTaGAGAGTGAGCGAACACTCTGACTGCTCTCAAAAT +
Preference number: 3 (lower is better)
Translates to: GPGTHNRPSENI*RVSEHSDCSQN
Trigger: ATTTTGAGAGCAGTCAGAGTGTTCGCTCACTCTGCAGATGTTTTCTGAGGGCCTGTTGTGTGTGCCAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 72 bp AGGGTGCACAAAGCAGTTGAGGTCACACATGCACAGTaGCAGGTGCCCAGAAGAAACTCAAATGCTGGCTCT +
Preference number: 3 (lower is better)
Translates to: RVHKAVEVTHAQ*QVPRRNSNAGS
Trigger: AGAGCCAGCATTTGAGTTTCTTCTGGGCACCTGCCACTGTGCATGTGTGACCTCAACTGCTTTGTGCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CAA 90 bp CAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCATCACCACTGTTCGGAGGTTCCTaGGATGGGTGCCCTGGTGAA +
Preference number: 3 (lower is better)
Translates to: QFGKQPRFTAVLDTKSSPLFGGS*DGCPGE
Trigger: TTCACCAGGGCACCCATCCAAGGAACCTCCGAACAG...TGGTGATGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR TCA 72 bp GTGCTGTTCCCTGGCAAGGCTGCCATGAAGACGAAATaGGACAACTTATGGAGCAAGCACAGGATTCACTCC +
Preference number: 3 (lower is better)
Translates to: VLFPGKAAMKTK*DNLWSKHRIHS
Trigger: GGAGTGAATCCTGTGCTTGCTCCATAAGTTGTCTCATTTCGTCTTCATGGCAGCCTTGCCAGGGAACAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 72 bp TTAATTCCCTGGACCTCTAATTCGCCATCTGTGAATTaGGGACAAGTGCTGTTCCCTGGCAAGGCTGCCATG +
Preference number: 3 (lower is better)
Translates to: LIPWTSNSPSVN*GQVLFPGKAAM
Trigger: CATGGCAGCCTTGCCAGGGAACAGCACTTGTCCCCAATTCACAGATGGCGAATTAGAGGTCCAGGGAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CAA 90 bp CGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCATCAGCCGCGTTTTGGTaGCAACTCATGGCTTTTCCT +
Preference number: 3 (lower is better)
Translates to: RPQFGKQPRFTAVLDTKSSAAFW*QLMAFP
Trigger: AGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGA...TGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CAA 90 bp TTCTTGTACATTTCCTTTTGCCCCTGTGCTAGAGTTCCTCCCAAGACTAGGAGGTCCACACCAAGTGTGTaGGGTGGAGGGAAACTGAGA +
Preference number: 3 (lower is better)
Translates to: FLYISFCPCARVPPKTRRSTPSV*GGGKLR
Trigger: TCTCAGTTTCCCTCCACCCAACACACTTGGTGTGGA...CCTCCTAGTCTTGGGAGGAACTCTAGCACAGGGGCAAAAGGAAATGTACAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
3UTR TCA 72 bp CGTGTTATCCAGGGTGGTCTCAATCTTCTGACCTCATaGTCCACCCATCTTGGCCTCCCAACCTTTAATCCA +
Preference number: 3 (lower is better)
Translates to: RVIQGGLNLLTS*STHLGLPTFNP
Trigger: TGGATTAAAGGTTGGGAGGCCAAGATGGGTGGATCATGAGGTCAGAAGATTGAGACCACCCTGGATAACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
3UTR GCA 72 bp ACAAAGCAGTTGAGGTCACACATGCACAGTGGCAGGTaGCCAGAAGAAACTCAAATGCTGGCTCTTGCAATG +
Preference number: 3 (lower is better)
Translates to: TKQLRSHMHSGR*PEETQMLALAM
Trigger: CATTGCAAGAGCCAGCATTTGAGTTTCTTCTGGGCACCTGCCACTGTGCATGTGTGACCTCAACTGCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR-3UTR CAA 90 bp CAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCATCACCATGGGTCAGACACACATaGACCAGGGTAGTTGGTTCA +
Preference number: 3 (lower is better)
Translates to: QFGKQPRFTAVLDTKSSPWVRHT*TRVVGS
Trigger: TGAACCAACTACCCTGGTCAATGTGTGTCTGACCCA...TGGTGATGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 72 bp TGTGAATTGGGGACAAGTGCTGTTCCCTGGCAAGGCTaGCATGAAGACGAAATGAGACAACTTATGGAGCAA +
Preference number: 3 (lower is better)
Translates to: CELGTSAVPWQG*HEDEMRQLMEQ
Trigger: TTGCTCCATAAGTTGTCTCATTTCGTCTTCATGGCAGCCTTGCCAGGGAACAGCACTTGTCCCCAATTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 72 bp TTTTATGCACCTGAAGTCAGACTGACAATAACATCTTaGCTCTGCCACCTAACACCTGTGACCTTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: FYAPEVRLTITS*LCHLTPVTLGR
Trigger: CCTGCCCAAGGTCACAGGTGTTAGGTGGCAGAGCCAAGATGTTATTGTCAGTCTGACTTCAGGTGCATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 72 bp TCTGTGAACACCCTTGGAGATGGTTTGCCTGAGACTTaGGAATTCTTAACATGTACTGTGAGCACAGGTGGG +
Preference number: 3 (lower is better)
Translates to: SVNTLGDGLPET*EFLTCTVSTGG
Trigger: CCCACCTGTGCTCACAGTACATGTTAAGAATTCCCAAGTCTCAGGCAAACCATCTCCAAGGGTGTTCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR TCA 72 bp GCACACACAACAGGCCCTCAGAAAACATCTGCAGAGTaGGCGAACACTCTGACTGCTCTCAAAATAGTAACT +
Preference number: 3 (lower is better)
Translates to: AHTTGPQKTSAE*ANTLTALKIVT
Trigger: AGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCTCACTCTGCAGATGTTTTCTGAGGGCCTGTTGTGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 72 bp TATACAGAGGAGTGTGGAGAAGATAGCCCACATCTGTaGACACATCACCCACCTCTGAAAAATCCTGTCATT +
Preference number: 3 (lower is better)
Translates to: YTEECGEDSPHL*THHPPLKNPVI
Trigger: AATGACAGGATTTTTCAGAGGTGGGTGATGTGTGCACAGATGTGGGCTATCTTCTCCACACTCCTCTGTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
3UTR CCA 72 bp AGGGTAGTTGGTTCACTCTGTGATCATGGGACAACCTaGAACTCTATCCAGCCTTCCCAGAAACTAAATCTA +
Preference number: 3 (lower is better)
Translates to: RVVGSLCDHGTT*NSIQPSQKLNL
Trigger: TAGATTTAGTTTCTGGGAAGGCTGGATAGAGTTCCAGGTTGTCCCATGATCACAGAGTGAACCAACTACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 72 bp TCAGAAAACATCTGCAGAGTGAGCGAACACTCTGACTaGTCTCAAAATAGTAACTGCAGGTGGCTTAATGTC +
Preference number: 3 (lower is better)
Translates to: SENICRVSEHSD*SQNSNCRWLNV
Trigger: GACATTAAGCCACCTGCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCTCACTCTGCAGATGTTTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 72 bp AGTCTTCAACAAATGGTGTCTGCGAGTTTAATTCCCTaGACCTCTAATTCGCCATCTGTGAATTGGGGACAA +
Preference number: 3 (lower is better)
Translates to: SLQQMVSASLIP*TSNSPSVNWGQ
Trigger: TTGTCCCCAATTCACAGATGGCGAATTAGAGGTCCAGGGAATTAAACTCGCAGACACCATTTGTTGAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR GCA 72 bp ACCATCTGTAAAATGAGAAGAATCGTGCCTAGTTTGTaGTCTTGTGAGAAGGGAAGAGACTATGTCTGCTTG +
Preference number: 3 (lower is better)
Translates to: TICKMRRIVPSL*SCEKGRDYVCL
Trigger: CAAGCAGACATAGTCTCTTCCCTTCTCACAAGAGCACAAACTAGGCACGATTCTTCTCATTTTACAGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CCA 72 bp CAGTACTTAGGAGTTACACACAACGGCCGTAACTGGTaGCTATCTGTTCATAACAAACAAACCATAGCATAT +
Preference number: 3 (lower is better)
Translates to: QYLGVTHNGRNW*LSVHNKQTIAY
Trigger: ATATGCTATGGTTTGTTTGTTATGAACAGATAGCCACCAGTTACGGCCGTTGTGTGTAACTCCTAAGTACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR TCA 72 bp TTCACTCCCCTACCCTCCATCTCAACAGTAGGTTTCTaGGATTTATCCATATTGATACATATAGCTCTGGTT +
Preference number: 3 (lower is better)
Translates to: FTPLPSISTVGF*DLSILIHIALV
Trigger: AACCAGAGCTATATGTATCAATATGGATAAATCTCAGAAACCTACTGTTGAGATGGAGGGTAGGGGAGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
3UTR GCA 72 bp AGTTTGTGCTCTTGTGAGAAGGGAAGAGACTATGTCTaGTTGTCACAAAATAAGTCTTCAACAAATGGTGTC +
Preference number: 3 (lower is better)
Translates to: SLCSCEKGRDYV*LSQNKSSTNGV
Trigger: GACACCATTTGTTGAAGACTTATTTTGTGACAAGCAGACATAGTCTCTTCCCTTCTCACAAGAGCACAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CGGCTGCCGCCTCCTGGGCAGGGCCGCGCTGGACCGAGGTGGGTGGGGGCATCACCTGCCTCCTTCAAGTaGGGCCCCAGGCAGGACAAC +
Preference number: 4 (lower is better)
Translates to: RLPPPGQGRAGPRWVGASPASFK*GPRQDN
Trigger: GTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGG...TGATGCCCCCACCCACCTCGGTCCAGCGCGGCCCTGCCCAGGAGGCGGCAGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GGGCATCAGGGCCCCGCAGCACGCCCCTCTCCAGCTTCGCATCAGGGCGAGGGGAAACTCCAGCAGGGCTaGCGAGGGTGCGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GHQGPAARPSPASHQGEGKLQQG*RGCARL
Trigger: CAGCCGGGCGCACCCTCGCCAGCCCTGCTGGAGTTT...CCCCTCGCCCTGATGCGAAGCTGGAGAGGGGCGTGCTGCGGGGCCCTGATGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GGGCATCAGGGCCCCGCAGCACGCCCCTCTCCAGCTTCGCATCAGGGCGAGGGGCGTTGGGCGTCTCCCTaGCCTCGGTGCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GHQGPAARPSPASHQGEGRWASP*PRCLCP
Trigger: AGGACAGAGGCACCGAGGCCAGGGAGACGCCCAACG...CCCCTCGCCCTGATGCGAAGCTGGAGAGGGGCGTGCTGCGGGGCCCTGATGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CGGCTGCCGCCTCCTGGGCAGGGCCGCGCTGGACCGAGGTGGGTGGGGGCATCAATGCGTGACATGCCTTaGGAACTGCCGAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RLPPPGQGRAGPRWVGASMRDMP*ELPSAR
Trigger: CCTGGCACTCGGCAGTTCTCAAGGCATGTCACGCAT...TGATGCCCCCACCCACCTCGGTCCAGCGCGGCCCTGCCCAGGAGGCGGCAGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CGGCTGCCGCCTCCTGGGCAGGGCCGCGCTGGACCGAGGTGGGTGGGGGCATCAGAAGGGTCCGGGATCTaGCCAGGCATCATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RLPPPGQGRAGPRWVGASEGSGI*PGIIAG
Trigger: TCCTGCTATGATGCCTGGGCAGATCCCGGACCCTTC...TGATGCCCCCACCCACCTCGGTCCAGCGCGGCCCTGCCCAGGAGGCGGCAGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGGCATCAGGGCCCCGCAGCACGCCCCTCTCCAGCTTCGCATCAGGGCGAGGGGTCGGTGCCTCTGTCCTaGCTCCTTCAAGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GHQGPAARPSPASHQGEGSVPLS*LLQVGP
Trigger: GGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA...CCCCTCGCCCTGATGCGAAGCTGGAGAGGGGCGTGCTGCGGGGCCCTGATGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CGGCTGCCGCCTCCTGGGCAGGGCCGCGCTGGACCGAGGTGGGTGGGGGCATCACATTCGGTGAGTATGTaGTTTGGAAGGGCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: RLPPPGQGRAGPRWVGASHSVSM*FGRAPA
Trigger: CGCGGGCGCCCTTCCAAAGCACATACTCACCGAATG...TGATGCCCCCACCCACCTCGGTCCAGCGCGGCCCTGCCCAGGAGGCGGCAGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CGGCTGCCGCCTCCTGGGCAGGGCCGCGCTGGACCGAGGTGGGTGGGGGCATCAGCAAGGGTGCAATCATaGCCCCGAGGTTGCGGATGT +
Preference number: 4 (lower is better)
Translates to: RLPPPGQGRAGPRWVGASARVQS*PRGCGC
Trigger: ACATCCGCAACCTCGGGGCCATGATTGCACCCTTGC...TGATGCCCCCACCCACCTCGGTCCAGCGCGGCCCTGCCCAGGAGGCGGCAGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGGCATCAGGGCCCCGCAGCACGCCCCTCTCCAGCTTCGCATCAGGGCGAGGGGGTTTCTAGGGCGGGGTaGAGGGGAGTCCACACCAAG +
Preference number: 4 (lower is better)
Translates to: GHQGPAARPSPASHQGEGVSRAG*RGVHTK
Trigger: CTTGGTGTGGACTCCCCTGCACCCCGCCCTAGAAAC...CCCCTCGCCCTGATGCGAAGCTGGAGAGGGGCGTGCTGCGGGGCCCTGATGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCGCGTCCCGGGTTCCATaGAGTCCCCCGGCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: ALGPSGFPQPALPPGWLIASRVP*SPPAPP
Trigger: TGGCGGAGCCGGGGGACTGCATGGAACCCGGGACGC...GATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419727.6
CDS-3UTR GCA 90 bp CGGCTGCCGCCTCCTGGGCAGGGCCGCGCTGGACCGAGGTGGGTGGGGGCATCACGTCCTACTTACCCTTaGAGTGGCATCCCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: RLPPPGQGRAGPRWVGASRPTYP*SGIPSS
Trigger: GGAACTAGGGATGCCACTGCAAGGGTAAGTAGGACG...TGATGCCCCCACCCACCTCGGTCCAGCGCGGCCCTGCCCAGGAGGCGGCAGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CCA 90 bp AGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCAGTCAGGGCCGAGCTaGGGAGCCCGGTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SAWSLWVSSARSSSWVADQSGPS*GARSGG
Trigger: GCCCCCTGACCGGGCTCCCCAGCTCGGCCCTGACTG...ATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGCAGTCAGGGCCGAGCTaGGGAGCCCGGTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LVSALGPSGFPQPALPPGQSGPS*GARSGG
Trigger: GCCCCCTGACCGGGCTCCCCAGCTCGGCCCTGACTG...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GGGCATCAGGGCCCCGCAGCACGCCCCTCTCCAGCTTCGCATCAGGGCGAGGGGGCCCGCTCTTCCTCCTaGGTGGCTGATCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GHQGPAARPSPASHQGEGARSSS*VADLSF
Trigger: GAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGC...CCCCTCGCCCTGATGCGAAGCTGGAGAGGGGCGTGCTGCGGGGCCCTGATGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACCTCCGCCACCCCACGGTaGAGGAGCGCTCGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: RCLCPASFKWGPRQDNPTSATPR*RSARES
Trigger: GCTTTCTCGAGCGCTCCTGCACCGTGGGGTGGCGGA...GGTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419727.6
CDS-3UTR GCA 90 bp GGGCATCAGGGCCCCGCAGCACGCCCCTCTCCAGCTTCGCATCAGGGCGAGGGGACCATTCTCCACTTCTaGCCATCCCAGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GHQGPAARPSPASHQGEGTILHF*PSQKAS
Trigger: CGAGGCCTTCTGGGATGGGCAGAAGTGGAGAATGGT...CCCCTCGCCCTGATGCGAAGCTGGAGAGGGGCGTGCTGCGGGGCCCTGATGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCCAGGGGGCCAAGCCCTaGCAGGGAGCCTGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: ALGPSGFPQPALPPGWLIQGAKP*QGACGH
Trigger: GTGACCACAGGCTCCCTGCCAGGGCTTGGCCCCCTG...GATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGCCAGGGCTGCCTCGTTaGGCGTCTCCCTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LVSALGPSGFPQPALPPGPGLPR*ASPWPR
Trigger: CCGAGGCCAGGGAGACGCCCAACGAGGCAGCCCTGG...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GGGCATCAGGGCCCCGCAGCACGCCCCTCTCCAGCTTCGCATCAGGGCGAGGGGTGTTCGGAGGTTCCTTaGATGGGTGCCCTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GHQGPAARPSPASHQGEGCSEVP*MGALVK
Trigger: CTTCACCAGGGCACCCATCCAAGGAACCTCCGAACA...CCCCTCGCCCTGATGCGAAGCTGGAGAGGGGCGTGCTGCGGGGCCCTGATGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGAAACTCCAGCAGGGCTaGCGAGGGTGCGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: VSALGPSGFPQPALPPGWKLQQG*RGCARL
Trigger: CAGCCGGGCGCACCCTCGCCAGCCCTGCTGGAGTTT...CCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GGGCATCAGGGCCCCGCAGCACGCCCCTCTCCAGCTTCGCATCAGGGCGAGGGGAAGGGTTTACAAGGATaGAAATGCACCCCGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GHQGPAARPSPASHQGEGKGLQG*KCTPPP
Trigger: CGGGGGCGGGGTGCATTTCCATCCTTGTAAACCCTT...CCCCTCGCCCTGATGCGAAGCTGGAGAGGGGCGTGCTGCGGGGCCCTGATGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACCCGGGCTGGGGCCTCTTaGCCAGTTTCACCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RCLCPASFKWGPRQDNPTRAGAS*PVSPPG
Trigger: TCCTGGAGGTGAAACTGGGCAAGAGGCCCCAGCCCG...GGTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACCTCGGTGCCTCTGTCCTaGCTCCTTCAAGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: RCLCPASFKWGPRQDNPTSVPLS*LLQVGP
Trigger: GGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA...GGTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGCAGGGGGCCAAGCCCTaGCAGGGAGCCTGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LVSALGPSGFPQPALPPGQGAKP*QGACGH
Trigger: GTGACCACAGGCTCCCTGCCAGGGCTTGGCCCCCTG...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCCAGTCAGGGCCGAGCTaGGGAGCCCGGTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: QPYPRVNFGLSAWSLWVSQSGPS*GARSGG
Trigger: GCCCCCTGACCGGGCTCCCCAGCTCGGCCCTGACTG...GGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCCCAGGGCTGCCTCGTTaGGCGTCTCCCTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: QAGQPYPRVNFGLSAWSLPGLPR*ASPWPR
Trigger: CCGAGGCCAGGGAGACGCCCAACGAGGCAGCCCTGG...GAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CGGCTGCCGCCTCCTGGGCAGGGCCGCGCTGGACCGAGGTGGGTGGGGGCATCACACAACGGCCGTAACTaGTGGCTATCTGTTCATAAC +
Preference number: 4 (lower is better)
Translates to: RLPPPGQGRAGPRWVGASHNGRN*WLSVHN
Trigger: GTTATGAACAGATAGCCACCAGTTACGGCCGTTGTG...TGATGCCCCCACCCACCTCGGTCCAGCGCGGCCCTGCCCAGGAGGCGGCAGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTAAAGCTCGAGGTCCCTaGGCTGCGGGAGCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GPRQDNPTRGSTLVSALGKARGP*AAGASP
Trigger: CGGGGAGGCTCCCGCAGCCCAGGGACCTCGAGCTTT...ACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435893.6
CDS-3UTR GCA 90 bp GGGCATCAGGGCCCCGCAGCACGCCCCTCTCCAGCTTCGCATCAGGGCGAGGGGCAGCCGCGTTTTGGTTaGAACTCATGGCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GHQGPAARPSPASHQGEGQPRFG*NSWLFL
Trigger: CAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTG...CCCCTCGCCCTGATGCGAAGCTGGAGAGGGGCGTGCTGCGGGGCCCTGATGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp AGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGGCAGGGAGCCTGTaGTCACCGAAGGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SAWSLWVSSARSSSWVADLAGSL*SPKGPG
Trigger: TCCCGGACCCTTCGGTGACCACAGGCTCCCTGCCAG...ATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CTGGCCACCCCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCCAGTCAGGGCCGAGCTaGGGAGCCCGGTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LATPDTQRLQYLGVTHNGQSGPS*GARSGG
Trigger: GCCCCCTGACCGGGCTCCCCAGCTCGGCCCTGACTG...GCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGGGGTGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GGGGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGCCTGCCTCCTTCAAGTaGGGCCCCAGGCAGGACAAC +
Preference number: 4 (lower is better)
Translates to: GAPGRTTLPEGQLWSQRLPASFK*GPRQDN
Trigger: GTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGG...CAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCACCAGGGCTGCCTCGTTaGGCGTCTCCCTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: PYPRVNFGLSAWSLWVSSPGLPR*ASPWPR
Trigger: CCGAGGCCAGGGAGACGCCCAACGAGGCAGCCCTGG...TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp ACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCCCAGGGCTGCCTCGTTaGGCGTCTCCCTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TLPEGQLWSQRLVPLGFLPGLPR*ASPWPR
Trigger: CCGAGGCCAGGGAGACGCCCAACGAGGCAGCCCTGG...GAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGCGGGCTGGGGCCTCTTaGCCAGTTTCACCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LVSALGPSGFPQPALPPGRAGAS*PVSPPG
Trigger: TCCTGGAGGTGAAACTGGGCAAGAGGCCCCAGCCCG...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACCCGGCATCGGGCTGCTaGGACTTTGTTCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYPASGC*DFVLLP
Trigger: CGGGAGAAGAACAAAGTCGCAGCAGCCCGATGCCGG...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACTTACAAGGATGGAAATaGACCCCGCCCCCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYLQGWK*TPPPPW
Trigger: CCAGGGCGGGGGCGGGGTGCATTTCCATCCTTGTAA...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGGGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGCACAGGTGGGTCTGTaGCATCTCTCCCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GAPGRTTLPEGQLWSQRLAQVGL*HLSRLP
Trigger: AGGAAGCCGGGAGAGATGGCACAGACCCACCTGTGC...CAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCCTGGCAGGGAGCCTGTaGTCACCGAAGGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: QAGQPYPRVNFGLSAWSLLAGSL*SPKGPG
Trigger: TCCCGGACCCTTCGGTGACCACAGGCTCCCTGCCAG...GAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCGTTGGGCGTCTCCCTaGCCTCGGTGCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PGRTTLPEGQLWSQRLVPRWASP*PRCLCP
Trigger: AGGACAGAGGCACCGAGGCCAGGGAGACGCCCAACG...AGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACATGCGTGACATGCCTTaGGAACTGCCGAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYMRDMP*ELPSAR
Trigger: CCTGGCACTCGGCAGTTCTCAAGGCATGTCACGCAT...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGGGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGATCAGGATGAGCTGCTaGCGCTCCTGCTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GAPGRTTLPEGQLWSQRLIRMSC*RSCFSS
Trigger: GGAGCTGAAGCAGGAGCGGCAGCAGCTCATCCTGAT...CAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACAGCATCAGGATGAGCTaGTGCCGCTCCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYSIRMS*CRSCFS
Trigger: GCTGAAGCAGGAGCGGCAGCAGCTCATCCTGATGCT...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTCGGTGCCTCTGTCCTaGCTCCTTCAAGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: QAGQPYPRVNFGLSAWSLSVPLS*LLQVGP
Trigger: GGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA...GAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGGCGCCCGCGCCTCAGTaGCCACAGCAAACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PTRGSTLVSALGPSGFPQAPAPQ*PQQTPA
Trigger: TGCTGGAGTTTGCTGTGGGCACTGAGGCGCGGGCGC...CTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACCACCATTCTCCACTTCTaGCCATCCCAGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RCLCPASFKWGPRQDNPTTILHF*PSQKAS
Trigger: CGAGGCCTTCTGGGATGGGCAGAAGTGGAGAATGGT...GGTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACCTCTCTCCCGGCTTCCTaGACAAGTTCCCTGGCAACT +
Preference number: 4 (lower is better)
Translates to: RCLCPASFKWGPRQDNPTSLPAS*TSSLAT
Trigger: AGTTGCCAGGGAACTTGTGCAGGAAGCCGGGAGAGA...GGTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GGGGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGCCTCCTCCCAGCCCATaGTCACTTCTTCTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: GAPGRTTLPEGQLWSQRLPPPSP*SLLLEL
Trigger: CAGCTCGAGAAGAAGTGACCATGGGCTGGGAGGAGG...CAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACCCTCCTCCCAGCCCATaGTCACTTCTTCTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYPPPSP*SLLLEL
Trigger: CAGCTCGAGAAGAAGTGACCATGGGCTGGGAGGAGG...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCCCGAGGGTCAACTTTaGTCTCAGCGCTTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: VSALGPSGFPQPALPPGWPEGQL*SQRLVP
Trigger: AGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGG...CCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCCCTGCCTCCTTCAAGTaGGGCCCCAGGCAGGACAAC +
Preference number: 4 (lower is better)
Translates to: QAGQPYPRVNFGLSAWSLPASFK*GPRQDN
Trigger: GTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGG...GAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTGGTGAGTATGTGCTTTaGAAGGGCGCCCGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: GPRQDNPTRGSTLVSALGGEYVL*KGARAS
Trigger: TGAGGCGCGGGCGCCCTTCCAAAGCACATACTCACC...ACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp AGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATAGCCTCCCGAGTAGCTaGGACTACAGGCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: SAWSLWVSSARSSSWVADSLPSS*DYRHVP
Trigger: TGGCACGTGCCTGTAGTCCCAGCTACTCGGGAGGCT...ATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
3UTR CAA 72 bp GGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTaGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GPRQDNPTRGST*VSALGPSGFPQ
Trigger: CTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGGATGGGTGCCCTGGTaGAGAGGCCAGAGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: PYPRVNFGLSAWSLWVSSGWVPW*RGQRRA
Trigger: GGCTCTTCTCTGGCCTCTTCACCAGGGCACCCATCC...TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATGAAGGGTCCGGGATCTaGCCAGGCATCATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SAWSLWVSSARSSSWVADEGSGI*PGIIAG
Trigger: TCCTGCTATGATGCCTGGGCAGATCCCGGACCCTTC...ATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACCAGGAAGTGCAAGGGTaGAATCATGGCCCCGAGGTT +
Preference number: 4 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYQEVQG*NHGPEV
Trigger: AACCTCGGGGCCATGATTGCACCCTTGCACTTCCTG...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCACGGGCTGGGGCCTCTTaGCCAGTTTCACCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PYPRVNFGLSAWSLWVSSRAGAS*PVSPPG
Trigger: TCCTGGAGGTGAAACTGGGCAAGAGGCCCCAGCCCG...TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCCGGGCTGGGGCCTCTTaGCCAGTTTCACCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QPYPRVNFGLSAWSLWVSRAGAS*PVSPPG
Trigger: TCCTGGAGGTGAAACTGGGCAAGAGGCCCCAGCCCG...GGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCCCGGCATCGGGCTGCTaGGACTTTGTTCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: QAGQPYPRVNFGLSAWSLPASGC*DFVLLP
Trigger: CGGGAGAAGAACAAAGTCGCAGCAGCCCGATGCCGG...GAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GAACAGGCCTATAGCAGAGGCTCCAAACAGTCTCCGACCCTGAGAGGGCCTTGCCGCTCGGATTCCCGCTaGAGAAACTCCGTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: EQAYSRGSKQSPTLRGPCRSDSR*RNSVRS
Trigger: GGAGCGCACGGAGTTTCTGCAGCGGGAATCCGAGCG...GCAAGGCCCTCTCAGGGTCGGAGACTGTTTGGAGCCTCTGCTATAGGCCTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGATCAGGATGAGCTGCTaGCGCTCCTGCTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LVSALGPSGFPQPALPPGIRMSC*RSCFSS
Trigger: GGAGCTGAAGCAGGAGCGGCAGCAGCTCATCCTGAT...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGAGCATCAGGATGAGCTaGTGCCGCTCCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LVSALGPSGFPQPALPPGSIRMS*CRSCFS
Trigger: GCTGAAGCAGGAGCGGCAGCAGCTCATCCTGATGCT...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTTACAAGGATGGAAATaGACCCCGCCCCCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QAGQPYPRVNFGLSAWSLLQGWK*TPPPPW
Trigger: CCAGGGCGGGGGCGGGGTGCATTTCCATCCTTGTAA...GAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCGCTCTATTTTGGAGATaGCAGCTCCCGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: ALGPSGFPQPALPPGWLIALFWR*QLPVAK
Trigger: CTTGGCCACCGGGAGCTGGCATCTCCAAAATAGAGC...GATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GGTGGAGGGAAACTGAGAGGAGTGAGCGAGGGAGGGATCACAGGTGTGTTAATCCAGGGGGCCAAGCCCTaGCAGGGAGCCTGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: GGGKLRGVSEGGITGVLIQGAKP*QGACGH
Trigger: GTGACCACAGGCTCCCTGCCAGGGCTTGGCCCCCTG...GATTAACACACCTGTGATCCCTCCCTCGCTCACTCCTCTCAGTTTCCCTCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGTTTCACACGTTGGGCGTCTCCCTaGCCTCGGTGCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LWVSSARSSSWVADLSFTRWASP*PRCLCP
Trigger: AGGACAGAGGCACCGAGGCCAGGGAGACGCCCAACG...TGTGAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTGTTCGGCCAGGGCTGCCTCGTTaGGCGTCTCCCTGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: FHPQPRFGCNSWLFLAVRPGLPR*ASPWPR
Trigger: CCGAGGCCAGGGAGACGCCCAACGAGGCAGCCCTGG...CCGAACAGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACTGTTCGGAGGTTCCTTaGATGGGTGCCCTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYCSEVP*MGALVK
Trigger: CTTCACCAGGGCACCCATCCAAGGAACCTCCGAACA...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp AGGATTACAGCGCGAGGGGTTCCTGATGCAGAACTGACACTGCCTCACCTGCATAAACTCCAGCAGGGCTaGCGAGGGTGCGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: RITARGVPDAELTLPHLHKLQQG*RGCARL
Trigger: CAGCCGGGCGCACCCTCGCCAGCCCTGCTGGAGTTT...ATGCAGGTGAGGCAGTGTCAGTTCTGCATCAGGAACCCCTCGCGCTGTAATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACGGATTCACTCCTTACTaGAGGCCCCACAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYGFTPY*RPHKGK
Trigger: CTTGCCCTTGTGGGGCCTCCAGTAAGGAGTGAATCC...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCGGATTCACTCCTTACTaGAGGCCCCACAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: ALGPSGFPQPALPPGWLIGFTPY*RPHKGK
Trigger: CTTGCCCTTGTGGGGCCTCCAGTAAGGAGTGAATCC...GATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CTGGCCACCCCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCGATGCCAGCTCCCGGTaGCCAAGCACAGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: LATPDTQRLQYLGVTHNGDASSR*PSTGPG
Trigger: CCCTGGTCCTGTGCTTGGCCACCGGGAGCTGGCATC...GCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGGGGTGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp GCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCGTTGCAGTTTCATTCTaGGTTCCATCCTCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: ALGPSGFPQPALPPGWLIVAVSF*VPSSAA
Trigger: CGCGGCTGAGGATGGAACTCAGAATGAAACTGCAAC...GATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACGTTGCAGTTTCATTCTaGGTTCCATCCTCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYVAVSF*VPSSAA
Trigger: CGCGGCTGAGGATGGAACTCAGAATGAAACTGCAAC...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCAACAGTCTCCGACCCTaGGAGGGCCTTGCACCCATT +
Preference number: 4 (lower is better)
Translates to: QAGQPYPRVNFGLSAWSLNSLRP*EGLAPI
Trigger: AATGGGTGCAAGGCCCTCTCAGGGTCGGAGACTGTT...GAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp GTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGTGTTTCATCCTCCAGTaGATTCTCAGGGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: VSALGPSGFPQPALPPGWCFILQ*ILRAWH
Trigger: GTGCCAGGCCCTGAGAATTCACTGGAGGATGAAACA...CCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp GTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGATCATAGTGGGTTGGTaGCAGGAGGAGAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: VSALGPSGFPQPALPPGWIIVGW*QEESHR
Trigger: CCTGTGACTCTCCTCCTGTCACCAACCCACTATGAT...CCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp TCCAAACAGTCTCCGACCCTGAGAGGGCCTTGCACCCATTCCCCAGGCAGACACCGCCTTCCTCATGCGTaGCATGCCTTGAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: SKQSPTLRGPCTHSPGRHRLPHA*HALRTA
Trigger: GGCAGTTCTCAAGGCATGTCACGCATGAGGAAGGCG...GTGTCTGCCTGGGGAATGGGTGCAAGGCCCTCTCAGGGTCGGAGACTGTTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACAAGTCACTGGTGTGGTaGCTTTGGAAGACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYKSLVW*LWKTAH
Trigger: GTGGGCTGTCTTCCAAAGTCACCACACCAGTGACTT...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CTGGCCACCCCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCGGCCCAGGGAGGGAATaGTGCATCCAGCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: LATPDTQRLQYLGVTHNGGPGRE*CIQHGW
Trigger: CCAGCCATGCTGGATGCATCATTCCCTCCCTGGGCC...GCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGGGGTGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR GCA 90 bp TCCAAACAGTCTCCGACCCTGAGAGGGCCTTGCACCCATTCCCCAGGCAGACACGAAGGGTCCGGGATCTaGCCAGGCATCATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SKQSPTLRGPCTHSPGRHEGSGI*PGIIAG
Trigger: TCCTGCTATGATGCCTGGGCAGATCCCGGACCCTTC...GTGTCTGCCTGGGGAATGGGTGCAAGGCCCTCTCAGGGTCGGAGACTGTTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACTCATGGCCCCGAGGTTaGGGATGTCAGCGTATTTCA +
Preference number: 4 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYSWPRG*GCQRIS
Trigger: TGAAATACGCTGACATCCGCAACCTCGGGGCCATGA...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGTCATGGCCCCGAGGTTaGGGATGTCAGCGTATTTCA +
Preference number: 4 (lower is better)
Translates to: VSALGPSGFPQPALPPGWSWPRG*GCQRIS
Trigger: TGAAATACGCTGACATCCGCAACCTCGGGGCCATGA...CCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCAGGAAGTGCAAGGGTaGAATCATGGCCCCGAGGTT +
Preference number: 4 (lower is better)
Translates to: GPRQDNPTRGSTLVSALGQEVQG*NHGPEV
Trigger: AACCTCGGGGCCATGATTGCACCCTTGCACTTCCTG...ACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGCAGGAAGTGCAAGGGTaGAATCATGGCCCCGAGGTT +
Preference number: 4 (lower is better)
Translates to: LVSALGPSGFPQPALPPGQEVQG*NHGPEV
Trigger: AACCTCGGGGCCATGATTGCACCCTTGCACTTCCTG...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp ACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCCCGGCATCGGGCTGCTaGGACTTTGTTCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: TLPEGQLWSQRLVPLGFLPASGC*DFVLLP
Trigger: CGGGAGAAGAACAAAGTCGCAGCAGCCCGATGCCGG...GAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATGTTCCGGCATCGGGCTaGTGCGACTTTGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SAWSLWVSSARSSSWVADVPASG*CDFVLL
Trigger: GAGAAGAACAAAGTCGCAGCAGCCCGATGCCGGAAC...ATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTGTTCCGGCATCGGGCTaGTGCGACTTTGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GPRQDNPTRGSTLVSALGVPASG*CDFVLL
Trigger: GAGAAGAACAAAGTCGCAGCAGCCCGATGCCGGAAC...ACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGTTTCACACGCTCGGATTCCCGCTaGAGAAACTCCGTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: LWVSSARSSSWVADLSFTRSDSR*RNSVRS
Trigger: GGAGCGCACGGAGTTTCTGCAGCGGGAATCCGAGCG...TGTGAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CTGGCCACCCCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCCGCTCGGATTCCCGCTaGAGAAACTCCGTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: LATPDTQRLQYLGVTHNGRSDSR*RNSVRS
Trigger: GGAGCGCACGGAGTTTCTGCAGCGGGAATCCGAGCG...GCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGGGGTGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGCTGGGTCTTCAGCTCTaGGTTCATGAGTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LVSALGPSGFPQPALPPGLGLQL*VHEFQP
Trigger: CGGCTGGAACTCATGAACGCAGAGCTGAAGACCCAG...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TCCAAACAGTCTCCGACCCTGAGAGGGCCTTGCACCCATTCCCCAGGCAGACACCATTCGGTGAGTATGTaGTTTGGAAGGGCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: SKQSPTLRGPCTHSPGRHHSVSM*FGRAPA
Trigger: CGCGGGCGCCCTTCCAAAGCACATACTCACCGAATG...GTGTCTGCCTGGGGAATGGGTGCAAGGCCCTCTCAGGGTCGGAGACTGTTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGGCATCAGGGCCCCGCAGCACGCCCCTCTCCAGCTTCGCATCAGGGCGAGGGGGTAAACTGTAGCCTTTaGAAGCTTCAGTATACAAGG +
Preference number: 4 (lower is better)
Translates to: GHQGPAARPSPASHQGEGVNCSL*KLQYTR
Trigger: CCTTGTATACTGAAGCTTGCAAAGGCTACAGTTTAC...CCCCTCGCCCTGATGCGAAGCTGGAGAGGGGCGTGCTGCGGGGCCCTGATGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCAGAAGGCAACCCGCTaGCACAACCTTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: PGRTTLPEGQLWSQRLVPQKATR*HNLLPQ
Trigger: CTGTGGCAGAAGGTTGTGGCAGCGGGTTGCCTTCTG...AGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATGCTCTATTTTGGAGATaGCAGCTCCCGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SAWSLWVSSARSSSWVADALFWR*QLPVAK
Trigger: CTTGGCCACCGGGAGCTGGCATCTCCAAAATAGAGC...ATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp AGCTCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCACAGTCAGGGCCGAGCTaGGGAGCCCGGTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SSADAGCAEPHCTVFHAPQSGPS*GARSGG
Trigger: GCCCCCTGACCGGGCTCCCCAGCTCGGCCCTGACTG...TGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCGCAAGGGTGCAATCATaGCCCCGAGGTTGCGGATGT +
Preference number: 4 (lower is better)
Translates to: QAGQPYPRVNFGLSAWSLARVQS*PRGCGC
Trigger: ACATCCGCAACCTCGGGGCCATGATTGCACCCTTGC...GAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCCTCCTCCCAGCCCATaGTCACTTCTTCTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: PGRTTLPEGQLWSQRLVPPPPSP*SLLLEL
Trigger: CAGCTCGAGAAGAAGTGACCATGGGCTGGGAGGAGG...AGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGTTCGGAGGTTCCTTaGATGGGTGCCCTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LVSALGPSGFPQPALPPGCSEVP*MGALVK
Trigger: CTTCACCAGGGCACCCATCCAAGGAACCTCCGAACA...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGGGTGAGTATGTGCTTTaGAAGGGCGCCCGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: PTRGSTLVSALGPSGFPQGEYVL*KGARAS
Trigger: TGAGGCGCGGGCGCCCTTCCAAAGCACATACTCACC...CTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGAAGGGTTTACAAGGATaGAAATGCACCCCGCCCCCG +
Preference number: 4 (lower is better)
Translates to: LVSALGPSGFPQPALPPGKGLQG*KCTPPP
Trigger: CGGGGGCGGGGTGCATTTCCATCCTTGTAAACCCTT...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GGGGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGATCCACACCCTTCCCTaGGTCAGACACACATTGACC +
Preference number: 4 (lower is better)
Translates to: GAPGRTTLPEGQLWSQRLIHTLP*VRHTLT
Trigger: GGTCAATGTGTGTCTGACCCAGGGAAGGGTGTGGAT...CAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp AACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTTGCTCCGGCCCTGGGTaGCAGGGATTCAGCTGTCGA +
Preference number: 4 (lower is better)
Translates to: NPTRGSTLVSALGPSGFPCSGPG*QGFSCR
Trigger: TCGACAGCTGAATCCCTGCCACCCAGGGCCGGAGCA...AGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCGCCTCGTCCACAATTTaGGAAGCAACCCAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: ALGPSGFPQPALPPGWLIASSTI*EATQVH
Trigger: GTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGC...GATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGCATCCACTAGGTCACTaGAGGGACCCTGGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: LVSALGPSGFPQPALPPGHPLGH*RDPGKS
Trigger: GGACTTACCAGGGTCCCTCCAGTGACCTAGTGGATG...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CAA 72 bp ACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTaGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TTLPEGQLWSQR*VPLGFLSPLFL
Trigger: GAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp ACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGGCGAGAAGCAAGATaGTGGGGAAGGCCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: TLPEGQLWSQRLVPLGFLRREAR*WGRPQD
Trigger: GTCTTGGGGCCTTCCCCATCATCTTGCTTCTCGCCT...GAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267569.5
CDS-3UTR TCA 90 bp GGGGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGCTGGCAAGGCTGCCATaGAGACGAAATGAGACAACT +
Preference number: 4 (lower is better)
Translates to: GAPGRTTLPEGQLWSQRLLARLP*RRNETT
Trigger: AGTTGTCTCATTTCGTCTTCATGGCAGCCTTGCCAG...CAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAACAGCAGGCACTGAGTaGATGCCACTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PYPRVNFGLSAWSLWVSSTAGTE*MPLSCS
Trigger: GGAGCAGCTCAGTGGCATTCACTCAGTGCCTGCTGT...TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CTGGCCACCCCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCAGCGCGAGGGGTTCCTaGTGCAGAACTGACACTGCC +
Preference number: 4 (lower is better)
Translates to: LATPDTQRLQYLGVTHNGSARGS*CRTDTA
Trigger: GGCAGTGTCAGTTCTGCATCAGGAACCCCTCGCGCT...GCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGGGGTGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp GGGGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGAAGTTCCCTGGCAACTaGGGTCACACCACAAACACA +
Preference number: 4 (lower is better)
Translates to: GAPGRTTLPEGQLWSQRLKFPGN*GHTTNT
Trigger: TGTGTTTGTGGTGTGACCTCAGTTGCCAGGGAACTT...CAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACAAGTTCCCTGGCAACTaGGGTCACACCACAAACACA +
Preference number: 4 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYKFPGN*GHTTNT
Trigger: TGTGTTTGTGGTGTGACCTCAGTTGCCAGGGAACTT...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCACAGGTCTTATGTGTaGCCACCTGGCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: QLWSQRLVPLGFLSPLFLHRSYV*PPGRRA
Trigger: TGCCCTCCTGCCAGGTGGTCACACATAAGACCTGTG...GAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR TCA 90 bp GTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGGTGGTCTCAATCTTCTaGCCTCATGATCCACCCATC +
Preference number: 4 (lower is better)
Translates to: VSALGPSGFPQPALPPGWVVSIF*PHDPPI
Trigger: GATGGGTGGATCATGAGGTCAGAAGATTGAGACCAC...CCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR GCA 90 bp AGGATTACAGCGCGAGGGGTTCCTGATGCAGAACTGACACTGCCTCACCTGCATCGGGCTGGGGCCTCTTaGCCAGTTTCACCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RITARGVPDAELTLPHLHRAGAS*PVSPPG
Trigger: TCCTGGAGGTGAAACTGGGCAAGAGGCCCCAGCCCG...ATGCAGGTGAGGCAGTGTCAGTTCTGCATCAGGAACCCCTCGCGCTGTAATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCCGGCATCGGGCTGCTaGGACTTTGTTCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: NPTRGSTLVSALGPSGFPPASGC*DFVLLP
Trigger: CGGGAGAAGAACAAAGTCGCAGCAGCCCGATGCCGG...AGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp ACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCTGCTGCCGCTCCTaGTTCAGCTCCTCAATCTGG +
Preference number: 4 (lower is better)
Translates to: TLPEGQLWSQRLVPLGFLSCCRS*FSSSIW
Trigger: CCAGATTGAGGAGCTGAAGCAGGAGCGGCAGCAGCT...GAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCACTTCTTCTCGAGCTaGTCGAGCAGTGGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: PGRTTLPEGQLWSQRLVPHFFSS*SSSGLP
Trigger: AGGCAACCCACTGCTCGAGCAGCTCGAGAAGAAGTG...AGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp ACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCGGTTCCTTGGATGGGTaGCCTGGTGAAGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TLPEGQLWSQRLVPLGFLGSLDG*PGEEAR
Trigger: TCTGGCCTCTTCACCAGGGCACCCATCCAAGGAACC...GAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGGGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGCAGCCGCGTTTTGGTTaGAACTCATGGCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GAPGRTTLPEGQLWSQRLQPRFG*NSWLFL
Trigger: CAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTG...CAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCCGTAACTGGGCGCCCGCGCCTCAGTaGCCACAGCAAACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PDTQRLQYLGVTHNGRNWAPAPQ*PQQTPA
Trigger: TGCTGGAGTTTGCTGTGGGCACTGAGGCGCGGGCGC...CCAGTTACGGCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGGAAGCCACAGCCAGTGGCACACGGCAGTCCTGTAAGAACATCCACTAGGTCATTACAAGGATGGAAATaGACCCCGCCCCCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GKPQPVAHGSPVRTSTRSLQGWK*TPPPPW
Trigger: CCAGGGCGGGGGCGGGGTGCATTTCCATCCTTGTAA...TGACCTAGTGGATGTTCTTACAGGACTGCCGTGTGCCACTGGCTGTGGCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CTGGCCACCCCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCGTTTCTAGGGCGGGGTaGAGGGGAGTCCACACCAAG +
Preference number: 4 (lower is better)
Translates to: LATPDTQRLQYLGVTHNGVSRAG*RGVHTK
Trigger: CTTGGTGTGGACTCCCCTGCACCCCGCCCTAGAAAC...GCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGGGGTGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGTTTCACAGTTTCTAGGGCGGGGTaGAGGGGAGTCCACACCAAG +
Preference number: 4 (lower is better)
Translates to: LWVSSARSSSWVADLSFTVSRAG*RGVHTK
Trigger: CTTGGTGTGGACTCCCCTGCACCCCGCCCTAGAAAC...TGTGAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGGCATCAGGGCCCCGCAGCACGCCCCTCTCCAGCTTCGCATCAGGGCGAGGGGTCAAATGCTGGCTCTTaGAATGAAGCCTATAATTGT +
Preference number: 4 (lower is better)
Translates to: GHQGPAARPSPASHQGEGSNAGS*NEAYNC
Trigger: ACAATTATAGGCTTCATTGCAAGAGCCAGCATTTGA...CCCCTCGCCCTGATGCGAAGCTGGAGAGGGGCGTGCTGCGGGGCCCTGATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTTTGGTCTCAGCGCTTaGTCCCTCTGGGTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LVSALGPSGFPQPALPPGFGLSA*SLWVSS
Trigger: TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAA...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CTGGTGAGGAAGGCTCCGCACAGCACAAGTCACTGGTGTGGTGACTTTGGAAGACCTGCCTCCTTCAAGTaGGGCCCCAGGCAGGACAAC +
Preference number: 4 (lower is better)
Translates to: LVRKAPHSTSHWCGDFGRPASFK*GPRQDN
Trigger: GTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGG...TCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTGCGGAGCCTTCCTCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GGTGGAGGGAAACTGAGAGGAGTGAGCGAGGGAGGGATCACAGGTGTGTTAATCCCTGCCTCCTTCAAGTaGGGCCCCAGGCAGGACAAC +
Preference number: 4 (lower is better)
Translates to: GGGKLRGVSEGGITGVLIPASFK*GPRQDN
Trigger: GTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGG...GATTAACACACCTGTGATCCCTCCCTCGCTCACTCCTCTCAGTTTCCCTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTGTTCGGCGTTGGGCGTCTCCCTaGCCTCGGTGCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: FHPQPRFGCNSWLFLAVRRWASP*PRCLCP
Trigger: AGGACAGAGGCACCGAGGCCAGGGAGACGCCCAACG...CCGAACAGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCGTTGGGCGTCTCCCTaGCCTCGGTGCCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: HPRRPRPQFGKQPRFTAVRWASP*PRCLCP
Trigger: AGGACAGAGGCACCGAGGCCAGGGAGACGCCCAACG...AACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCCAAACAGTCTCCGACCCTGAGAGGGCCTTGCACCCATTCCCCAGGCAGACACAAGGGTTTACAAGGATaGAAATGCACCCCGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SKQSPTLRGPCTHSPGRHKGLQG*KCTPPP
Trigger: CGGGGGCGGGGTGCATTTCCATCCTTGTAAACCCTT...GTGTCTGCCTGGGGAATGGGTGCAAGGCCCTCTCAGGGTCGGAGACTGTTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GGTGGAGGGAAACTGAGAGGAGTGAGCGAGGGAGGGATCACAGGTGTGTTAATCTGCTCCGGCCCTGGGTaGCAGGGATTCAGCTGTCGA +
Preference number: 4 (lower is better)
Translates to: GGGKLRGVSEGGITGVLICSGPG*QGFSCR
Trigger: TCGACAGCTGAATCCCTGCCACCCAGGGCCGGAGCA...GATTAACACACCTGTGATCCCTCCCTCGCTCACTCCTCTCAGTTTCCCTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTTATGTGTGACCACCTaGCAGGAGGGCACACTGAGG +
Preference number: 4 (lower is better)
Translates to: QAGQPYPRVNFGLSAWSLLCVTT*QEGTLR
Trigger: CCTCAGTGTGCCCTCCTGCCAGGTGGTCACACATAA...GAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR TCA 90 bp CATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTGGATGGGTGCCCTGGTaGAGAGGCCAGAGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: HPRRPRPQFGKQPRFTAVGWVPW*RGQRRA
Trigger: GGCTCTTCTCTGGCCTCTTCACCAGGGCACCCATCC...AACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp GTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGGTCGCTTACCTTCTCTaGGCCTCAGTTAAACCATCT +
Preference number: 4 (lower is better)
Translates to: VSALGPSGFPQPALPPGWVAYLL*ASVKPS
Trigger: AGATGGTTTAACTGAGGCTCAGAGAAGGTAAGCGAC...CCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGTTTCACACGCCTTCCTCATGCGTaGCATGCCTTGAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: LWVSSARSSSWVADLSFTRLPHA*HALRTA
Trigger: GGCAGTTCTCAAGGCATGTCACGCATGAGGAAGGCG...TGTGAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp AACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCACAGGTCTTATGTGTaGCCACCTGGCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: NPTRGSTLVSALGPSGFPHRSYV*PPGRRA
Trigger: TGCCCTCCTGCCAGGTGGTCACACATAAGACCTGTG...AGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR GCA 90 bp CCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTTCATGGCCCCGAGGTTaGGGATGTCAGCGTATTTCA +
Preference number: 4 (lower is better)
Translates to: PGRTTLPEGQLWSQRLVPSWPRG*GCQRIS
Trigger: TGAAATACGCTGACATCCGCAACCTCGGGGCCATGA...AGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCACAGGAAGTGCAAGGGTaGAATCATGGCCCCGAGGTT +
Preference number: 4 (lower is better)
Translates to: PYPRVNFGLSAWSLWVSSQEVQG*NHGPEV
Trigger: AACCTCGGGGCCATGATTGCACCCTTGCACTTCCTG...TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCGTTCCGGCATCGGGCTaGTGCGACTTTGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: QPYPRVNFGLSAWSLWVSVPASG*CDFVLL
Trigger: GAGAAGAACAAAGTCGCAGCAGCCCGATGCCGGAAC...GGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGGAAGCCACAGCCAGTGGCACACGGCAGTCCTGTAAGAACATCCACTAGGTCAAGCTGCTGCCGCTCCTaGTTCAGCTCCTCAATCTGG +
Preference number: 4 (lower is better)
Translates to: GKPQPVAHGSPVRTSTRSSCCRS*FSSSIW
Trigger: CCAGATTGAGGAGCTGAAGCAGGAGCGGCAGCAGCT...TGACCTAGTGGATGTTCTTACAGGACTGCCGTGTGCCACTGGCTGTGGCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGTTTCACAATCAGGATGAGCTGCTaGCGCTCCTGCTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LWVSSARSSSWVADLSFTIRMSC*RSCFSS
Trigger: GGAGCTGAAGCAGGAGCGGCAGCAGCTCATCCTGAT...TGTGAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGTTTCACAAGCATCAGGATGAGCTaGTGCCGCTCCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LWVSSARSSSWVADLSFTSIRMS*CRSCFS
Trigger: GCTGAAGCAGGAGCGGCAGCAGCTCATCCTGATGCT...TGTGAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCCACTTCTTCTCGAGCTaGTCGAGCAGTGGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: QPYPRVNFGLSAWSLWVSHFFSS*SSSGLP
Trigger: AGGCAACCCACTGCTCGAGCAGCTCGAGAAGAAGTG...GGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCATTCGGTGAGTATGTaGTTTGGAAGGGCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: NPTRGSTLVSALGPSGFPHSVSM*FGRAPA
Trigger: CGCGGGCGCCCTTCCAAAGCACATACTCACCGAATG...AGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCCCTCAGAAAACATCTaGAGAGTGAGCGAACACTCT +
Preference number: 4 (lower is better)
Translates to: VSALGPSGFPQPALPPGWPSENI*RVSEHS
Trigger: AGAGTGTTCGCTCACTCTGCAGATGTTTTCTGAGGG...CCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCCTCCCGCCTTCCTCATaGGTGACATGCCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: QPYPRVNFGLSAWSLWVSLPPSS*VTCLEN
Trigger: GTTCTCAAGGCATGTCACGCATGAGGAAGGCGGGAG...GGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGTCTCTCCCGGCTTCCTaGACAAGTTCCCTGGCAACT +
Preference number: 4 (lower is better)
Translates to: PTRGSTLVSALGPSGFPQSLPAS*TSSLAT
Trigger: AGTTGCCAGGGAACTTGTGCAGGAAGCCGGGAGAGA...CTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TACAGGACTGAGTACTATGAAGGGTTTACAAGGATGGAAATGCACCCCGCCCCCCTGGCAGGGAGCCTGTaGTCACCGAAGGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: YRTEYYEGFTRMEMHPAPLAGSL*SPKGPG
Trigger: TCCCGGACCCTTCGGTGACCACAGGCTCCCTGCCAG...GGGGGCGGGGTGCATTTCCATCCTTGTAAACCCTTCATAGTACTCAGTCCTGTA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGTTTCACAGCAAGGGTGCAATCATaGCCCCGAGGTTGCGGATGT +
Preference number: 4 (lower is better)
Translates to: LWVSSARSSSWVADLSFTARVQS*PRGCGC
Trigger: ACATCCGCAACCTCGGGGCCATGATTGCACCCTTGC...TGTGAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTTCAGCTCCTCAATCTaGGTCTTCAGCTCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: LVSALGPSGFPQPALPPGFSSSI*VFSSAF
Trigger: GAACGCAGAGCTGAAGACCCAGATTGAGGAGCTGAA...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CTGGCCACCCCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCCCCGAGGGTCAACTTTaGTCTCAGCGCTTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: LATPDTQRLQYLGVTHNGPEGQL*SQRLVP
Trigger: AGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGG...GCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGGGGTGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACTCCTCAGCCGCGTTTTaGTTGCAACTCATGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYSSAAF*LQLMAF
Trigger: AAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGA...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TGTTGTGAAAATGAACAGGCCTATAGCAGAGGCTCCAAACAGTCTCCGACCCTGAAACTCCAGCAGGGCTaGCGAGGGTGCGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: CCENEQAYSRGSKQSPTLKLQQG*RGCARL
Trigger: CAGCCGGGCGCACCCTCGCCAGCCCTGCTGGAGTTT...CAGGGTCGGAGACTGTTTGGAGCCTCTGCTATAGGCCTGTTCATTTTCACAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGGGATTCACTCCTTACTaGAGGCCCCACAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: PTRGSTLVSALGPSGFPQGFTPY*RPHKGK
Trigger: CTTGCCCTTGTGGGGCCTCCAGTAAGGAGTGAATCC...CTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACCGCGAGTTTAATTCCCTaGACCTCTAATTCGCCATCT +
Preference number: 4 (lower is better)
Translates to: RCLCPASFKWGPRQDNPTASLIP*TSNSPS
Trigger: AGATGGCGAATTAGAGGTCCAGGGAATTAAACTCGC...GGTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CTTCTGCCACAGCTGACAGTGAGAGGACCAGGTCCTGTTTCTAGGGCGGGGTGCAGAGTCACAGGCCTCTaGAGGGAGAGTTCAAACACC +
Preference number: 4 (lower is better)
Translates to: LLPQLTVRGPGPVSRAGCRVTGL*RESSNT
Trigger: GGTGTTTGAACTCTCCCTCCAGAGGCCTGTGACTCT...GCACCCCGCCCTAGAAACAGGACCTGGTCCTCTCACTGTCAGCTGTGGCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTATCCACACCCTTCCCTaGGTCAGACACACATTGACC +
Preference number: 4 (lower is better)
Translates to: PGRTTLPEGQLWSQRLVPIHTLP*VRHTLT
Trigger: GGTCAATGTGTGTCTGACCCAGGGAAGGGTGTGGAT...AGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCCAAACAGTCTCCGACCCTGAGAGGGCCTTGCACCCATTCCCCAGGCAGACACGCCTCGTCCACAATTTaGGAAGCAACCCAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: SKQSPTLRGPCTHSPGRHASSTI*EATQVH
Trigger: GTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGC...GTGTCTGCCTGGGGAATGGGTGCAAGGCCCTCTCAGGGTCGGAGACTGTTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GAACAGGCCTATAGCAGAGGCTCCAAACAGTCTCCGACCCTGAGAGGGCCTTGCCATCCACTAGGTCACTaGAGGGACCCTGGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: EQAYSRGSKQSPTLRGPCHPLGH*RDPGKS
Trigger: GGACTTACCAGGGTCCCTCCAGTGACCTAGTGGATG...GCAAGGCCCTCTCAGGGTCGGAGACTGTTTGGAGCCTCTGCTATAGGCCTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACCACAGCACAAGTCACTaGTGTGGTGACTTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYHSTSH*CGDFGR
Trigger: TCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTG...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCCTGCACAAGTTCCCTaGCAACTGAGGTCACACCAC +
Preference number: 4 (lower is better)
Translates to: QLWSQRLVPLGFLSPLFLPAQVP*QLRSHH
Trigger: GTGGTGTGACCTCAGTTGCCAGGGAACTTGTGCAGG...GAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CAA 72 bp AGGCTCCGCACAGCACAAGTCACTGGTGTGGTGACTTaGGAAGACAGCCCACCTGCACAGGCTAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RLRTAQVTGVVT*EDSPPAQAKEA
Trigger: AGCCTCCTTAGCCTGTGCAGGTGGGCTGTCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTGCGGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTAGGAATCACCCAGGATaGCCTCTCTCTTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: PGRTTLPEGQLWSQRLVPRNHPG*PLSWNL
Trigger: CAGATTCCAAGAGAGAGGTCATCCTGGGTGATTCCT...AGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267569.5
CDS-3UTR TCA 90 bp CAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCGCCAGCCTGCTACCATaGATCTTGGAGAATCAACCA +
Preference number: 4 (lower is better)
Translates to: QAGQPYPRVNFGLSAWSLASLLP*ILENQP
Trigger: TGGTTGATTCTCCAAGATTCATGGTAGCAGGCTGGC...GAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267569.5
CDS-3UTR TCA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACTCTGTAAACATTCGGTaGGTATGTGCTTTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYSVNIR*VCALEG
Trigger: CCCTTCCAAAGCACATACTCACCGAATGTTTACAGA...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGCTAATTCGCCATCTGTaGATTGGGGACAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LVSALGPSGFPQPALPPGLIRHL*IGDKCC
Trigger: ACAGCACTTGTCCCCAATTCACAGATGGCGAATTAG...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp TCTGCCCATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTATGCGTGACATGCCTTaGGAACTGCCGAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SAHPRRPRPQFGKQPRFTMRDMP*ELPSAR
Trigger: CCTGGCACTCGGCAGTTCTCAAGGCATGTCACGCAT...AGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATGGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACCCAGGTTTTATGCACCTaGAGTCAGACTGACAATAAC +
Preference number: 4 (lower is better)
Translates to: RCLCPASFKWGPRQDNPTQVLCT*SQTDNN
Trigger: GTTATTGTCAGTCTGACTTCAGGTGCATAAAACCTG...GGTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCTCATGGCCCCGAGGTTaGGGATGTCAGCGTATTTCA +
Preference number: 4 (lower is better)
Translates to: QLWSQRLVPLGFLSPLFLSWPRG*GCQRIS
Trigger: TGAAATACGCTGACATCCGCAACCTCGGGGCCATGA...GAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TCTGAGTTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTCGCTCGGATTCCCGCTaGAGAAACTCCGTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: SEFHPQPRFGCNSWLFLARSDSR*RNSVRS
Trigger: GGAGCGCACGGAGTTTCTGCAGCGGGAATCCGAGCG...AGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAACTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GAGGCCCCACAAGGGCAAGACTTAGGTCTGTTTCATCCTCCAGTGAATTCTCAGTCGGTGCCTCTGTCCTaGCTCCTTCAAGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: EAPQGQDLGLFHPPVNSQSVPLS*LLQVGP
Trigger: GGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA...CTGAGAATTCACTGGAGGATGAAACAGACCTAAGTCTTGCCCTTGTGGGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGTGGAGGGAAACTGAGAGGAGTGAGCGAGGGAGGGATCACAGGTGTGTTAATCGGTTCCTTGGATGGGTaGCCTGGTGAAGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GGGKLRGVSEGGITGVLIGSLDG*PGEEAR
Trigger: TCTGGCCTCTTCACCAGGGCACCCATCCAAGGAACC...GATTAACACACCTGTGATCCCTCCCTCGCTCACTCCTCTCAGTTTCCCTCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCAGCGCCCGCGCCTCAGTaGCCACAGCAAACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RPQFGKQPRFTAVLDTKSAPAPQ*PQQTPA
Trigger: TGCTGGAGTTTGCTGTGGGCACTGAGGCGCGGGCGC...TGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CTGGTGAGGAAGGCTCCGCACAGCACAAGTCACTGGTGTGGTGACTTTGGAAGACATTCGGTGAGTATGTaGTTTGGAAGGGCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: LVRKAPHSTSHWCGDFGRHSVSM*FGRAPA
Trigger: CGCGGGCGCCCTTCCAAAGCACATACTCACCGAATG...TCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTGCGGAGCCTTCCTCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCACATGCCTTGAGAACTaGCGAGTGCCAGGTACACAG +
Preference number: 4 (lower is better)
Translates to: QLWSQRLVPLGFLSPLFLTCLEN*RVPGTQ
Trigger: CTGTGTACCTGGCACTCGGCAGTTCTCAAGGCATGT...GAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CTGGCCACCCCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCACCATTCTCCACTTCTaGCCATCCCAGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LATPDTQRLQYLGVTHNGTILHF*PSQKAS
Trigger: CGAGGCCTTCTGGGATGGGCAGAAGTGGAGAATGGT...GCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGGGGTGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp ATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCGCACAGGTGGGTCTGTaGCATCTCTCCCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: IPEGLVHNLGSNPGSLLFAQVGL*HLSRLP
Trigger: AGGAAGCCGGGAGAGATGGCACAGACCCACCTGTGC...GAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCCCTTGGAGATGGTTTaGCTGAGACTTGGGAATTCT +
Preference number: 4 (lower is better)
Translates to: SAWSLWVSSARSSSWVADPLEMV*LRLGNS
Trigger: AGAATTCCCAAGTCTCAGGCAAACCATCTCCAAGGG...ATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTACAGATCCAGGAGTCTaGGATCCCAGGCATTCATCA +
Preference number: 4 (lower is better)
Translates to: PGRTTLPEGQLWSQRLVPTDPGV*DPRHSS
Trigger: TGATGAATGCCTGGGATCGCAGACTCCTGGATCTGT...AGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CCA 90 bp ATCTGCAGAGTGAGCGAACACTCTGACTGCTCTCAAAATAGTAACTGCAGGTGGCAGGGGGCCAAGCCCTaGCAGGGAGCCTGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: ICRVSEHSDCSQNSNCRWQGAKP*QGACGH
Trigger: GTGACCACAGGCTCCCTGCCAGGGCTTGGCCCCCTG...CCACCTGCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCTCACTCTGCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp AACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTTCACTTTTCACGGGCTaGGGCCTCTTGCCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: NPTRGSTLVSALGPSGFPSLFTG*GLLPSF
Trigger: GAAACTGGGCAAGAGGCCCCAGCCCGTGAAAAGTGA...AGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CTGGTGAGGAAGGCTCCGCACAGCACAAGTCACTGGTGTGGTGACTTTGGAAGAGCCCGCTCTTCCTCCTaGGTGGCTGATCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LVRKAPHSTSHWCGDFGRARSSS*VADLSF
Trigger: GAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGC...TCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTGCGGAGCCTTCCTCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGTTTGGTCTCAGCGCTTaGTCCCTCTGGGTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: PTRGSTLVSALGPSGFPQFGLSA*SLWVSS
Trigger: TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAA...CTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CTGGTGAGGAAGGCTCCGCACAGCACAAGTCACTGGTGTGGTGACTTTGGAAGACCCGAGGGTCAACTTTaGTCTCAGCGCTTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: LVRKAPHSTSHWCGDFGRPEGQL*SQRLVP
Trigger: AGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGG...TCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTGCGGAGCCTTCCTCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GGGAAGCCACAGCCAGTGGCACACGGCAGTCCTGTAAGAACATCCACTAGGTCATGTTCGGAGGTTCCTTaGATGGGTGCCCTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GKPQPVAHGSPVRTSTRSCSEVP*MGALVK
Trigger: CTTCACCAGGGCACCCATCCAAGGAACCTCCGAACA...TGACCTAGTGGATGTTCTTACAGGACTGCCGTGTGCCACTGGCTGTGGCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCGCCTCGTCCACAATTTaGGAAGCAACCCAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: QLWSQRLVPLGFLSPLFLASSTI*EATQVH
Trigger: GTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGC...GAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp AGCTCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAGATGCCAGCTCCCGGTaGCCAAGCACAGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: SSADAGCAEPHCTVFHAPDASSR*PSTGPG
Trigger: CCCTGGTCCTGTGCTTGGCCACCGGGAGCTGGCATC...TGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAAAGGAGGCTCTATTTTaGAGATGCCAGCTCCCGGTG +
Preference number: 4 (lower is better)
Translates to: PYPRVNFGLSAWSLWVSSKEALF*RCQLPV
Trigger: CACCGGGAGCTGGCATCTCCAAAATAGAGCCTCCTT...TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCCTGACAATAACATCTTaGCTCTGCCACCTAACACCT +
Preference number: 4 (lower is better)
Translates to: ALGPSGFPQPALPPGWLILTITS*LCHLTP
Trigger: AGGTGTTAGGTGGCAGAGCCAAGATGTTATTGTCAG...GATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTCTGTAAACATTCGGTaGGTATGTGCTTTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LVSALGPSGFPQPALPPGSVNIR*VCALEG
Trigger: CCCTTCCAAAGCACATACTCACCGAATGTTTACAGA...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCCTGGCAAGGCTGCCATaGAGACGAAATGAGACAACT +
Preference number: 4 (lower is better)
Translates to: QPYPRVNFGLSAWSLWVSLARLP*RRNETT
Trigger: AGTTGTCTCATTTCGTCTTCATGGCAGCCTTGCCAG...GGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGTTTCACAATCATAGTGGGTTGGTaGCAGGAGGAGAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: LWVSSARSSSWVADLSFTIIVGW*QEESHR
Trigger: CCTGTGACTCTCCTCCTGTCACCAACCCACTATGAT...TGTGAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp ATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCCGCCTTCCTCATGCGTaGCATGCCTTGAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: IPEGLVHNLGSNPGSLLFRLPHA*HALRTA
Trigger: GGCAGTTCTCAAGGCATGTCACGCATGAGGAAGGCG...GAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGTTTCACAGGTGCACAAAGCAGTTaGGGTCACACATGCACAGTG +
Preference number: 4 (lower is better)
Translates to: LWVSSARSSSWVADLSFTGAQSS*GHTCTV
Trigger: CACTGTGCATGTGTGACCTCAACTGCTTTGTGCACC...TGTGAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp AGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCACATCACCCACCTCTaGAAAATCCTGTCATTCTAC +
Preference number: 4 (lower is better)
Translates to: SAWSLWVSSARSSSWVADHITHL*KILSFY
Trigger: GTAGAATGACAGGATTTTTCAGAGGTGGGTGATGTG...ATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR GCA 90 bp CCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCCGTAACTGGGAAGGGTCCGGGATCTaGCCAGGCATCATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PDTQRLQYLGVTHNGRNWEGSGI*PGIIAG
Trigger: TCCTGCTATGATGCCTGGGCAGATCCCGGACCCTTC...CCAGTTACGGCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTTCATGGCCCCGAGGTTaGGGATGTCAGCGTATTTCA +
Preference number: 4 (lower is better)
Translates to: NPTRGSTLVSALGPSGFPSWPRG*GCQRIS
Trigger: TGAAATACGCTGACATCCGCAACCTCGGGGCCATGA...AGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGTTTCACATTCACCTCCAGGAAGTaGAAGGGTGCAATCATGGCC +
Preference number: 4 (lower is better)
Translates to: LWVSSARSSSWVADLSFTFTSRK*KGAIMA
Trigger: GGCCATGATTGCACCCTTGCACTTCCTGGAGGTGAA...TGTGAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AGGATTACAGCGCGAGGGGTTCCTGATGCAGAACTGACACTGCCTCACCTGCATGTTCCGGCATCGGGCTaGTGCGACTTTGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: RITARGVPDAELTLPHLHVPASG*CDFVLL
Trigger: GAGAAGAACAAAGTCGCAGCAGCCCGATGCCGGAAC...ATGCAGGTGAGGCAGTGTCAGTTCTGCATCAGGAACCCCTCGCGCTGTAATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGGCGCTCGGATTCCCGCTaGAGAAACTCCGTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: RLMLAVLNLIVQFFMHQRRSDSR*RNSVRS
Trigger: GGAGCGCACGGAGTTTCTGCAGCGGGAATCCGAGCG...CCTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCCGTAACTGGAGCTGCTGCCGCTCCTaGTTCAGCTCCTCAATCTGG +
Preference number: 4 (lower is better)
Translates to: PDTQRLQYLGVTHNGRNWSCCRS*FSSSIW
Trigger: CCAGATTGAGGAGCTGAAGCAGGAGCGGCAGCAGCT...CCAGTTACGGCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGTTGTACAGTTTTTCATaGACCAAAGGAAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: VSALGPSGFPQPALPPGWLYSFS*TKGRAI
Trigger: GATGGCCCTTCCTTTGGTGCATGAAAAACTGTACAA...CCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GAAGACGAAATGAGACAACTTATGGAGCAAGCACAGGATTCACTCCTTACTGGAAAGGAAGCCTCAGGCTaGCGGGCGCCTCGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: EDEMRQLMEQAQDSLLTGKEASG*RAPRGR
Trigger: CCTCCCGCGAGGCGCCCGGCAGCCTGAGGCTTCCTT...TCCAGTAAGGAGTGAATCCTGTGCTTGCTCCATAAGTTGTCTCATTTCGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435893.6
CDS-3UTR GCA 90 bp GCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCAGCGAACACTCTGACTaGTCTCAAAATAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: ALGPSGFPQPALPPGWLISEHSD*SQNSNC
Trigger: GCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCT...GATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp ACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCTTCAGCTCCTCAATCTaGGTCTTCAGCTCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: TLPEGQLWSQRLVPLGFLFSSSI*VFSSAF
Trigger: GAACGCAGAGCTGAAGACCCAGATTGAGGAGCTGAA...GAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGTTCAGCTCCTCAATCTaGGTCTTCAGCTCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: PTRGSTLVSALGPSGFPQFSSSI*VFSSAF
Trigger: GAACGCAGAGCTGAAGACCCAGATTGAGGAGCTGAA...CTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CTGGCCACCCCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCTTTGGTCTCAGCGCTTaGTCCCTCTGGGTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LATPDTQRLQYLGVTHNGFGLSA*SLWVSS
Trigger: TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAA...GCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGGGGTGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp AACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTTTTGGTCTCAGCGCTTaGTCCCTCTGGGTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: NPTRGSTLVSALGPSGFPFGLSA*SLWVSS
Trigger: TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAA...AGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCTGAGTTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTGGTGAGTATGTGCTTTaGAAGGGCGCCCGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: SEFHPQPRFGCNSWLFLAGEYVL*KGARAS
Trigger: TGAGGCGCGGGCGCCCTTCCAAAGCACATACTCACC...AGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAACTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CTTCTGCCACAGCTGACAGTGAGAGGACCAGGTCCTGTTTCTAGGGCGGGGTGCCACAACGGCCGTAACTaGTGGCTATCTGTTCATAAC +
Preference number: 4 (lower is better)
Translates to: LLPQLTVRGPGPVSRAGCHNGRN*WLSVHN
Trigger: GTTATGAACAGATAGCCACCAGTTACGGCCGTTGTG...GCACCCCGCCCTAGAAACAGGACCTGGTCCTCTCACTGTCAGCTGTGGCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp AGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATGCGAGTTTAATTCCCTaGACCTCTAATTCGCCATCT +
Preference number: 4 (lower is better)
Translates to: SAWSLWVSSARSSSWVADASLIP*TSNSPS
Trigger: AGATGGCGAATTAGAGGTCCAGGGAATTAAACTCGC...ATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp ACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCGATCATGGGACAACCTaGAACTCTATCCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: TLPEGQLWSQRLVPLGFLDHGTT*NSIQPS
Trigger: GGAAGGCTGGATAGAGTTCCAGGTTGTCCCATGATC...GAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGGTGCTCCGGCCCTGGGTaGCAGGGATTCAGCTGTCGA +
Preference number: 4 (lower is better)
Translates to: RLMLAVLNLIVQFFMHQRCSGPG*QGFSCR
Trigger: TCGACAGCTGAATCCCTGCCACCCAGGGCCGGAGCA...CCTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CTGGCCACCCCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCGTCACACATGCACAGTaGCAGGTGCCCAGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: LATPDTQRLQYLGVTHNGVTHAQ*QVPRRN
Trigger: GTTTCTTCTGGGCACCTGCCACTGTGCATGTGTGAC...GCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGGGGTGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp AGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGACAATAACATCTTaGCTCTGCCACCTAACACCT +
Preference number: 4 (lower is better)
Translates to: SAWSLWVSSARSSSWVADLTITS*LCHLTP
Trigger: AGGTGTTAGGTGGCAGAGCCAAGATGTTATTGTCAG...ATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp ACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCACATTTTTCCTCTCATaGGGAGGCTCAGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: TLPEGQLWSQRLVPLGFLTFFLS*GGSASG
Trigger: ACCTGAGGCTGAGCCTCCCCATGAGAGGAAAAATGT...GAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACGTCAGAACACAAACTTaGCAGCCCATCTTTACAGAA +
Preference number: 4 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYVRTQT*QPIFTE
Trigger: TTCTGTAAAGATGGGCTGCCAAGTTTGTGTTCTGAC...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CCA 90 bp TCTGAGTTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTAGCCTCCCGAGTAGCTaGGACTACAGGCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: SEFHPQPRFGCNSWLFLASLPSS*DYRHVP
Trigger: TGGCACGTGCCTGTAGTCCCAGCTACTCGGGAGGCT...AGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAACTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR TCA 90 bp CAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCGTCGCTTACCTTCTCTaGGCCTCAGTTAAACCATCT +
Preference number: 4 (lower is better)
Translates to: QLWSQRLVPLGFLSPLFLVAYLL*ASVKPS
Trigger: AGATGGTTTAACTGAGGCTCAGAGAAGGTAAGCGAC...GAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CTGGTGAGGAAGGCTCCGCACAGCACAAGTCACTGGTGTGGTGACTTTGGAAGATTCCTGATGCAGAACTaGCACTGCCTCACCTGCATC +
Preference number: 4 (lower is better)
Translates to: LVRKAPHSTSHWCGDFGRFLMQN*HCLTCI
Trigger: GATGCAGGTGAGGCAGTGTCAGTTCTGCATCAGGAA...TCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTGCGGAGCCTTCCTCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CTGGTGAGGAAGGCTCCGCACAGCACAAGTCACTGGTGTGGTGACTTTGGAAGAGGTGCACAAAGCAGTTaGGGTCACACATGCACAGTG +
Preference number: 4 (lower is better)
Translates to: LVRKAPHSTSHWCGDFGRGAQSS*GHTCTV
Trigger: CACTGTGCATGTGTGACCTCAACTGCTTTGTGCACC...TCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTGCGGAGCCTTCCTCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp TCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGGGCCCAGGGAGGGAATaGTGCATCCAGCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: SADAGCAEPHCTVFHAPKGPGRE*CIQHGW
Trigger: CCAGCCATGCTGGATGCATCATTCCCTCCCTGGGCC...CTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR TCA 90 bp TGTTGTGAAAATGAACAGGCCTATAGCAGAGGCTCCAAACAGTCTCCGACCCTGCCTCCCAGGTCCAAGTaGTTCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: CCENEQAYSRGSKQSPTLPPRSK*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCACTTGGACCTGGGAGG...CAGGGTCGGAGACTGTTTGGAGCCTCTGCTATAGGCCTGTTCATTTTCACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR GCA 90 bp CATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCAGGAAGTGCAAGGGTaGAATCATGGCCCCGAGGTT +
Preference number: 4 (lower is better)
Translates to: HPRRPRPQFGKQPRFTAVQEVQG*NHGPEV
Trigger: AACCTCGGGGCCATGATTGCACCCTTGCACTTCCTG...AACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AGGATTACAGCGCGAGGGGTTCCTGATGCAGAACTGACACTGCCTCACCTGCATTTCACCTCCAGGAAGTaGAAGGGTGCAATCATGGCC +
Preference number: 4 (lower is better)
Translates to: RITARGVPDAELTLPHLHFTSRK*KGAIMA
Trigger: GGCCATGATTGCACCCTTGCACTTCCTGGAGGTGAA...ATGCAGGTGAGGCAGTGTCAGTTCTGCATCAGGAACCCCTCGCGCTGTAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TGTTGTGAAAATGAACAGGCCTATAGCAGAGGCTCCAAACAGTCTCCGACCCTGCCGGCATCGGGCTGCTaGGACTTTGTTCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: CCENEQAYSRGSKQSPTLPASGC*DFVLLP
Trigger: CGGGAGAAGAACAAAGTCGCAGCAGCCCGATGCCGG...CAGGGTCGGAGACTGTTTGGAGCCTCTGCTATAGGCCTGTTCATTTTCACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTGGGTCTTCAGCTCTaGGTTCATGAGTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: HPRRPRPQFGKQPRFTAVLGLQL*VHEFQP
Trigger: CGGCTGGAACTCATGAACGCAGAGCTGAAGACCCAG...AACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCACTTCTTCTCGAGCTaGTCGAGCAGTGGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: HPRRPRPQFGKQPRFTAVHFFSS*SSSGLP
Trigger: AGGCAACCCACTGCTCGAGCAGCTCGAGAAGAAGTG...AACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTTTGTACAGTTTTTCATaGACCAAAGGAAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: GPRQDNPTRGSTLVSALGLYSFS*TKGRAI
Trigger: GATGGCCCTTCCTTTGGTGCATGAAAAACTGTACAA...ACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATTTGTACAGTTTTTCATaGACCAAAGGAAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: SAWSLWVSSARSSSWVADLYSFS*TKGRAI
Trigger: GATGGCCCTTCCTTTGGTGCATGAAAAACTGTACAA...ATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATTCAACAAATGGTGTCTaGGAGTTTAATTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: SAWSLWVSSARSSSWVADSTNGV*EFNSLD
Trigger: GTCCAGGGAATTAAACTCGCAGACACCATTTGTTGA...ATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TCTGCCCATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTACATGCCTTGAGAACTaGCGAGTGCCAGGTACACAG +
Preference number: 4 (lower is better)
Translates to: SAHPRRPRPQFGKQPRFTTCLEN*RVPGTQ
Trigger: CTGTGTACCTGGCACTCGGCAGTTCTCAAGGCATGT...AGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATGGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGTTTCACAACAGATCCAGGAGTCTaGGATCCCAGGCATTCATCA +
Preference number: 4 (lower is better)
Translates to: LWVSSARSSSWVADLSFTTDPGV*DPRHSS
Trigger: TGATGAATGCCTGGGATCGCAGACTCCTGGATCTGT...TGTGAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CCA 90 bp GAAGACGAAATGAGACAACTTATGGAGCAAGCACAGGATTCACTCCTTACTGGACAGGGGGCCAAGCCCTaGCAGGGAGCCTGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: EDEMRQLMEQAQDSLLTGQGAKP*QGACGH
Trigger: GTGACCACAGGCTCCCTGCCAGGGCTTGGCCCCCTG...TCCAGTAAGGAGTGAATCCTGTGCTTGCTCCATAAGTTGTCTCATTTCGTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TACAGGACTGAGTACTATGAAGGGTTTACAAGGATGGAAATGCACCCCGCCCCCGCAAGGGTGCAATCATaGCCCCGAGGTTGCGGATGT +
Preference number: 4 (lower is better)
Translates to: YRTEYYEGFTRMEMHPAPARVQS*PRGCGC
Trigger: ACATCCGCAACCTCGGGGCCATGATTGCACCCTTGC...GGGGGCGGGGTGCATTTCCATCCTTGTAAACCCTTCATAGTACTCAGTCCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GAGGCCCCACAAGGGCAAGACTTAGGTCTGTTTCATCCTCCAGTGAATTCTCAGGCCCGCTCTTCCTCCTaGGTGGCTGATCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: EAPQGQDLGLFHPPVNSQARSSS*VADLSF
Trigger: GAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGC...CTGAGAATTCACTGGAGGATGAAACAGACCTAAGTCTTGCCCTTGTGGGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp ACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCTCCTCAGCCGCGTTTTaGTTGCAACTCATGGCTTTT +
Preference number: 4 (lower is better)
Translates to: TLPEGQLWSQRLVPLGFLSSAAF*LQLMAF
Trigger: AAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGA...GAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCAGGTGAGTATGTGCTTTaGAAGGGCGCCCGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: RPQFGKQPRFTAVLDTKSGEYVL*KGARAS
Trigger: TGAGGCGCGGGCGCCCTTCCAAAGCACATACTCACC...TGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCACAACGGCCGTAACTaGTGGCTATCTGTTCATAAC +
Preference number: 4 (lower is better)
Translates to: QLWSQRLVPLGFLSPLFLHNGRN*WLSVHN
Trigger: GTTATGAACAGATAGCCACCAGTTACGGCCGTTGTG...GAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTGTTCGGAAGGGTTTACAAGGATaGAAATGCACCCCGCCCCCG +
Preference number: 4 (lower is better)
Translates to: FHPQPRFGCNSWLFLAVRKGLQG*KCTPPP
Trigger: CGGGGGCGGGGTGCATTTCCATCCTTGTAAACCCTT...CCGAACAGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCTGCCCATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTAGAGTCACAGGCCTCTaGAGGGAGAGTTCAAACACC +
Preference number: 4 (lower is better)
Translates to: SAHPRRPRPQFGKQPRFTRVTGL*RESSNT
Trigger: GGTGTTTGAACTCTCCCTCCAGAGGCCTGTGACTCT...AGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATGGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGGGAGTCAAGTTTAGTTaGGTAAACTGTAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LVSALGPSGFPQPALPPGGVKFS*VNCSLC
Trigger: GCAAAGGCTACAGTTTACCCAACTAAACTTGACTCC...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCTGCCCATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTAAGGAGGCTCTATTTTaGAGATGCCAGCTCCCGGTG +
Preference number: 4 (lower is better)
Translates to: SAHPRRPRPQFGKQPRFTKEALF*RCQLPV
Trigger: CACCGGGAGCTGGCATCTCCAAAATAGAGCCTCCTT...AGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATGGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp ATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCCCTGCACAAGTTCCCTaGCAACTGAGGTCACACCAC +
Preference number: 4 (lower is better)
Translates to: IPEGLVHNLGSNPGSLLFPAQVP*QLRSHH
Trigger: GTGGTGTGACCTCAGTTGCCAGGGAACTTGTGCAGG...GAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTGTTCGGTTATGTGTGACCACCTaGCAGGAGGGCACACTGAGG +
Preference number: 4 (lower is better)
Translates to: FHPQPRFGCNSWLFLAVRLCVTT*QEGTLR
Trigger: CCTCAGTGTGCCCTCCTGCCAGGTGGTCACACATAA...CCGAACAGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
3UTR CAA 72 bp CCACTTCTGCCCATCCCAGAAGGCCTCGTCCACAATTaGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACA +
Preference number: 4 (lower is better)
Translates to: PLLPIPEGLVHN*GSNPGSLLFLT
Trigger: TGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATGGGCAGAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCCGTAACTGGCTCTTGGAATCTGAATaGCGTAGGTCACGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: PDTQRLQYLGVTHNGRNWLLESE*RRSRGF
Trigger: GAAGCCGCGTGACCTACGTCATTCAGATTCCAAGAG...CCAGTTACGGCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267569.5
CDS-3UTR TCA 90 bp GGAGTTACACACAACGGCCGTAACTGGTGGCTATCTGTTCATAACAAACAAACCGGATGGGTGCCCTGGTaGAGAGGCCAGAGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: GVTHNGRNWWLSVHNKQTGWVPW*RGQRRA
Trigger: GGCTCTTCTCTGGCCTCTTCACCAGGGCACCCATCC...GGTTTGTTTGTTATGAACAGATAGCCACCAGTTACGGCCGTTGTGTGTAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp TTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTGTTCGGGTTGCAGTTTCATTCTaGGTTCCATCCTCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: FHPQPRFGCNSWLFLAVRVAVSF*VPSSAA
Trigger: CGCGGCTGAGGATGGAACTCAGAATGAAACTGCAAC...CCGAACAGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTTGTTTCATCCTCCAGTaGATTCTCAGGGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: HPRRPRPQFGKQPRFTAVCFILQ*ILRAWH
Trigger: GTGCCAGGCCCTGAGAATTCACTGGAGGATGAAACA...AACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGTTTCACACTAATTCGCCATCTGTaGATTGGGGACAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LWVSSARSSSWVADLSFTLIRHL*IGDKCC
Trigger: ACAGCACTTGTCCCCAATTCACAGATGGCGAATTAG...TGTGAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp ATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTCCTGATGCAGAACTaGCACTGCCTCACCTGCATC +
Preference number: 4 (lower is better)
Translates to: IPEGLVHNLGSNPGSLLFFLMQN*HCLTCI
Trigger: GATGCAGGTGAGGCAGTGTCAGTTCTGCATCAGGAA...GAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp TCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGAGCGCGAGGGGTTCCTaGTGCAGAACTGACACTGCC +
Preference number: 4 (lower is better)
Translates to: SADAGCAEPHCTVFHAPKSARGS*CRTDTA
Trigger: GGCAGTGTCAGTTCTGCATCAGGAACCCCTCGCGCT...CTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp ATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCAAGTCACTGGTGTGGTaGCTTTGGAAGACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: IPEGLVHNLGSNPGSLLFKSLVW*LWKTAH
Trigger: GTGGGCTGTCTTCCAAAGTCACCACACCAGTGACTT...GAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp TTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTGTTCGGAAGTCACTGGTGTGGTaGCTTTGGAAGACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: FHPQPRFGCNSWLFLAVRKSLVW*LWKTAH
Trigger: GTGGGCTGTCTTCCAAAGTCACCACACCAGTGACTT...CCGAACAGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp GAACAGGCCTATAGCAGAGGCTCCAAACAGTCTCCGACCCTGAGAGGGCCTTGCTGGAGATGGTTTGCCTaGGACTTGGGAATTCTTAAC +
Preference number: 4 (lower is better)
Translates to: EQAYSRGSKQSPTLRGPCWRWFA*DLGILN
Trigger: GTTAAGAATTCCCAAGTCTCAGGCAAACCATCTCCA...GCAAGGCCCTCTCAGGGTCGGAGACTGTTTGGAGCCTCTGCTATAGGCCTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGTGGAGATGGTTTGCCTaGGACTTGGGAATTCTTAAC +
Preference number: 4 (lower is better)
Translates to: PTRGSTLVSALGPSGFPQWRWFA*DLGILN
Trigger: GTTAAGAATTCCCAAGTCTCAGGCAAACCATCTCCA...CTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp TCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGCCTCCCAGGTCCAAGTaGTTCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SADAGCAEPHCTVFHAPKPPRSK*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCACTTGGACCTGGGAGG...CTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR GCA 90 bp TACAGGACTGAGTACTATGAAGGGTTTACAAGGATGGAAATGCACCCCGCCCCCCACTTCTTCTCGAGCTaGTCGAGCAGTGGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: YRTEYYEGFTRMEMHPAPHFFSS*SSSGLP
Trigger: AGGCAACCCACTGCTCGAGCAGCTCGAGAAGAAGTG...GGGGGCGGGGTGCATTTCCATCCTTGTAAACCCTTCATAGTACTCAGTCCTGTA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGTGGAGGGAAACTGAGAGGAGTGAGCGAGGGAGGGATCACAGGTGTGTTAATCCAGCCGCGTTTTGGTTaGAACTCATGGCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GGGKLRGVSEGGITGVLIQPRFG*NSWLFL
Trigger: CAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTG...GATTAACACACCTGTGATCCCTCCCTCGCTCACTCCTCTCAGTTTCCCTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GAAGACGAAATGAGACAACTTATGGAGCAAGCACAGGATTCACTCCTTACTGGAGCGCCCGCGCCTCAGTaGCCACAGCAAACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: EDEMRQLMEQAQDSLLTGAPAPQ*PQQTPA
Trigger: TGCTGGAGTTTGCTGTGGGCACTGAGGCGCGGGCGC...TCCAGTAAGGAGTGAATCCTGTGCTTGCTCCATAAGTTGTCTCATTTCGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTGTTCGGTCCTCATGCGTGACATaGCTTGAGAACTGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: FHPQPRFGCNSWLFLAVRSSCVT*LENCRV
Trigger: CACTCGGCAGTTCTCAAGGCATGTCACGCATGAGGA...CCGAACAGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCACAGAAGGCAACCCGCTaGCACAACCTTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: RPQFGKQPRFTAVLDTKSQKATR*HNLLPQ
Trigger: CTGTGGCAGAAGGTTGTGGCAGCGGGTTGCCTTCTG...TGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACTCAAATGCTGGCTCTTaGAATGAAGCCTATAATTGT +
Preference number: 4 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYSNAGS*NEAYNC
Trigger: ACAATTATAGGCTTCATTGCAAGAGCCAGCATTTGA...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGGAAGCCACAGCCAGTGGCACACGGCAGTCCTGTAAGAACATCCACTAGGTCAATGCACAGTGGCAGGTaGCCAGAAGAAACTCAAATG +
Preference number: 4 (lower is better)
Translates to: GKPQPVAHGSPVRTSTRSMHSGR*PEETQM
Trigger: CATTTGAGTTTCTTCTGGGCACCTGCCACTGTGCAT...TGACCTAGTGGATGTTCTTACAGGACTGCCGTGTGCCACTGGCTGTGGCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CTGGCCACCCCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCATGCACAGTGGCAGGTaGCCAGAAGAAACTCAAATG +
Preference number: 4 (lower is better)
Translates to: LATPDTQRLQYLGVTHNGMHSGR*PEETQM
Trigger: CATTTGAGTTTCTTCTGGGCACCTGCCACTGTGCAT...GCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGGGGTGGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTTGTACATTTCCTTTTaGCCCTGTGCTAGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: QAGQPYPRVNFGLSAWSLLYISF*PCARVP
Trigger: AGGAACTCTAGCACAGGGGCAAAAGGAAATGTACAA...GAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR GCA 90 bp CATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCGTCCTACTTACCCTTaGAGTGGCATCCCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: HPRRPRPQFGKQPRFTAVRPTYP*SGIPSS
Trigger: GGAACTAGGGATGCCACTGCAAGGGTAAGTAGGACG...AACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CCA 90 bp GAAGACGAAATGAGACAACTTATGGAGCAAGCACAGGATTCACTCCTTACTGGACTGGCAGGGAGCCTGTaGTCACCGAAGGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: EDEMRQLMEQAQDSLLTGLAGSL*SPKGPG
Trigger: TCCCGGACCCTTCGGTGACCACAGGCTCCCTGCCAG...TCCAGTAAGGAGTGAATCCTGTGCTTGCTCCATAAGTTGTCTCATTTCGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CTTCTGCCACAGCTGACAGTGAGAGGACCAGGTCCTGTTTCTAGGGCGGGGTGCAACGGCCGTAACTGGTaGCTATCTGTTCATAACAAA +
Preference number: 4 (lower is better)
Translates to: LLPQLTVRGPGPVSRAGCNGRNW*LSVHNK
Trigger: TTTGTTATGAACAGATAGCCACCAGTTACGGCCGTT...GCACCCCGCCCTAGAAACAGGACCTGGTCCTCTCACTGTCAGCTGTGGCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCTGCCCATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTTCGCCATCTGTGAATTaGGGACAAGTGCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: SAHPRRPRPQFGKQPRFTSPSVN*GQVLFP
Trigger: AGGGAACAGCACTTGTCCCCAATTCACAGATGGCGA...AGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATGGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCGCGAGTTTAATTCCCTaGACCTCTAATTCGCCATCT +
Preference number: 4 (lower is better)
Translates to: QLWSQRLVPLGFLSPLFLASLIP*TSNSPS
Trigger: AGATGGCGAATTAGAGGTCCAGGGAATTAAACTCGC...GAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCACTGACAATAACATCTTaGCTCTGCCACCTAACACCT +
Preference number: 4 (lower is better)
Translates to: PYPRVNFGLSAWSLWVSSLTITS*LCHLTP
Trigger: AGGTGTTAGGTGGCAGAGCCAAGATGTTATTGTCAG...TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCTGCCCATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTACATTTTTCCTCTCATaGGGAGGCTCAGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: SAHPRRPRPQFGKQPRFTTFFLS*GGSASG
Trigger: ACCTGAGGCTGAGCCTCCCCATGAGAGGAAAAATGT...AGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATGGGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CAA 72 bp AGCTTCCTATTCAACCATGAGGACAATCATAGTGGGTaGGTGACAGGAGGAGAGTCACAGGCCTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SFLFNHEDNHSG*VTGGESQASGG
Trigger: CCCTCCAGAGGCCTGTGACTCTCCTCCTGTCACCAACCCACTATGATTGTCCTCATGGTTGAATAGGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp TTCTTGTACATTTCCTTTTGCCCCTGTGCTAGAGTTCCTCCCAAGACTAGGAGGAACAGTCTCCGACCCTaGGAGGGCCTTGCACCCATT +
Preference number: 4 (lower is better)
Translates to: FLYISFCPCARVPPKTRRNSLRP*EGLAPI
Trigger: AATGGGTGCAAGGCCCTCTCAGGGTCGGAGACTGTT...CCTCCTAGTCTTGGGAGGAACTCTAGCACAGGGGCAAAAGGAAATGTACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR TCA 90 bp TTCTTGTACATTTCCTTTTGCCCCTGTGCTAGAGTTCCTCCCAAGACTAGGAGGACAGCAGGCACTGAGTaGATGCCACTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FLYISFCPCARVPPKTRRTAGTE*MPLSCS
Trigger: GGAGCAGCTCAGTGGCATTCACTCAGTGCCTGCTGT...CCTCCTAGTCTTGGGAGGAACTCTAGCACAGGGGCAAAAGGAAATGTACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR TCA 90 bp ATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCGTTCACTGCTGTTCTTaGCACGAAGTCATCACCAGC +
Preference number: 4 (lower is better)
Translates to: IPEGLVHNLGSNPGSLLFVHCCS*HEVITS
Trigger: GCTGGTGATGACTTCGTGTCAAGAACAGCAGTGAAC...GAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp GAGGCCCCACAAGGGCAAGACTTAGGTCTGTTTCATCCTCCAGTGAATTCTCAGGGTGCACAAAGCAGTTaGGGTCACACATGCACAGTG +
Preference number: 4 (lower is better)
Translates to: EAPQGQDLGLFHPPVNSQGAQSS*GHTCTV
Trigger: CACTGTGCATGTGTGACCTCAACTGCTTTGTGCACC...CTGAGAATTCACTGGAGGATGAAACAGACCTAAGTCTTGCCCTTGTGGGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGGAAGGGTCCGGGATCTaGCCAGGCATCATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SADAGCAEPHCTVFHAPKEGSGI*PGIIAG
Trigger: TCCTGCTATGATGCCTGGGCAGATCCCGGACCCTTC...CTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AGCTCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCACTGGGTCTTCAGCTCTaGGTTCATGAGTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: SSADAGCAEPHCTVFHAPLGLQL*VHEFQP
Trigger: CGGCTGGAACTCATGAACGCAGAGCTGAAGACCCAG...TGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TTCTTGTACATTTCCTTTTGCCCCTGTGCTAGAGTTCCTCCCAAGACTAGGAGGAGCTGCTGCCGCTCCTaGTTCAGCTCCTCAATCTGG +
Preference number: 4 (lower is better)
Translates to: FLYISFCPCARVPPKTRRSCCRS*FSSSIW
Trigger: CCAGATTGAGGAGCTGAAGCAGGAGCGGCAGCAGCT...CCTCCTAGTCTTGGGAGGAACTCTAGCACAGGGGCAAAAGGAAATGTACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR GCA 90 bp ATCTGCAGAGTGAGCGAACACTCTGACTGCTCTCAAAATAGTAACTGCAGGTGGATCAGGATGAGCTGCTaGCGCTCCTGCTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ICRVSEHSDCSQNSNCRWIRMSC*RSCFSS
Trigger: GGAGCTGAAGCAGGAGCGGCAGCAGCTCATCCTGAT...CCACCTGCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCTCACTCTGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCACACTTCTTCTCGAGCTaGTCGAGCAGTGGGTTGCCT +
Preference number: 4 (lower is better)
Translates to: RPQFGKQPRFTAVLDTKSHFFSS*SSSGLP
Trigger: AGGCAACCCACTGCTCGAGCAGCTCGAGAAGAAGTG...TGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCATCAACAAATGGTGTCTaGGAGTTTAATTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PYPRVNFGLSAWSLWVSSSTNGV*EFNSLD
Trigger: GTCCAGGGAATTAAACTCGCAGACACCATTTGTTGA...TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AGCTCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCACTCCCGCCTTCCTCATaGGTGACATGCCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: SSADAGCAEPHCTVFHAPLPPSS*VTCLEN
Trigger: GTTCTCAAGGCATGTCACGCATGAGGAAGGCGGGAG...TGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGTGGAGGGAAACTGAGAGGAGTGAGCGAGGGAGGGATCACAGGTGTGTTAATCATGCACAGTGGCAGGTaGCCAGAAGAAACTCAAATG +
Preference number: 4 (lower is better)
Translates to: GGGKLRGVSEGGITGVLIMHSGR*PEETQM
Trigger: CATTTGAGTTTCTTCTGGGCACCTGCCACTGTGCAT...GATTAACACACCTGTGATCCCTCCCTCGCTCACTCCTCTCAGTTTCCCTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp AGCTCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCATCACTTTTCACGGGCTaGGGCCTCTTGCCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SSADAGCAEPHCTVFHAPSLFTG*GLLPSF
Trigger: GAAACTGGGCAAGAGGCCCCAGCCCGTGAAAAGTGA...TGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGCCTCCTCCCAGCCCATaGTCACTTCTTCTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: SADAGCAEPHCTVFHAPKPPPSP*SLLLEL
Trigger: CAGCTCGAGAAGAAGTGACCATGGGCTGGGAGGAGG...CTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGCCCGAGGGTCAACTTTaGTCTCAGCGCTTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: SADAGCAEPHCTVFHAPKPEGQL*SQRLVP
Trigger: AGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGG...CTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAAACGGCCGTAACTGGTaGCTATCTGTTCATAACAAA +
Preference number: 4 (lower is better)
Translates to: PYPRVNFGLSAWSLWVSSNGRNW*LSVHNK
Trigger: TTTGTTATGAACAGATAGCCACCAGTTACGGCCGTT...TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCTGCCCATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTCACAGCACAAGTCACTaGTGTGGTGACTTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SAHPRRPRPQFGKQPRFTHSTSH*CGDFGR
Trigger: TCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTG...AGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATGGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGTTTCACAGTCTTTCTCAGGCCATaGTTGCATTCATCAACTCGA +
Preference number: 4 (lower is better)
Translates to: LWVSSARSSSWVADLSFTVFLRP*LHSSTR
Trigger: TCGAGTTGATGAATGCAACCATGGCCTGAGAAAGAC...TGTGAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR TCA 90 bp CGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGGGTTGCAGTTTCATTCTaGGTTCCATCCTCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: RLMLAVLNLIVQFFMHQRVAVSF*VPSSAA
Trigger: CGCGGCTGAGGATGGAACTCAGAATGAAACTGCAAC...CCTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp TCTGAGTTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTCTGGCAAGGCTGCCATaGAGACGAAATGAGACAACT +
Preference number: 4 (lower is better)
Translates to: SEFHPQPRFGCNSWLFLALARLP*RRNETT
Trigger: AGTTGTCTCATTTCGTCTTCATGGCAGCCTTGCCAG...AGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAACTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGGTTCCTGATGCAGAACTaGCACTGCCTCACCTGCATC +
Preference number: 4 (lower is better)
Translates to: RLMLAVLNLIVQFFMHQRFLMQN*HCLTCI
Trigger: GATGCAGGTGAGGCAGTGTCAGTTCTGCATCAGGAA...CCTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp GAAGACGAAATGAGACAACTTATGGAGCAAGCACAGGATTCACTCCTTACTGGAAGCGCGAGGGGTTCCTaGTGCAGAACTGACACTGCC +
Preference number: 4 (lower is better)
Translates to: EDEMRQLMEQAQDSLLTGSARGS*CRTDTA
Trigger: GGCAGTGTCAGTTCTGCATCAGGAACCCCTCGCGCT...TCCAGTAAGGAGTGAATCCTGTGCTTGCTCCATAAGTTGTCTCATTTCGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp AACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGGTTTTATGCACCTaGAGTCAGACTGACAATAAC +
Preference number: 4 (lower is better)
Translates to: NPTRGSTLVSALGPSGFPQVLCT*SQTDNN
Trigger: GTTATTGTCAGTCTGACTTCAGGTGCATAAAACCTG...AGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AGCTCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCATTCACCTCCAGGAAGTaGAAGGGTGCAATCATGGCC +
Preference number: 4 (lower is better)
Translates to: SSADAGCAEPHCTVFHAPFTSRK*KGAIMA
Trigger: GGCCATGATTGCACCCTTGCACTTCCTGGAGGTGAA...TGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGAGTTACACACAACGGCCGTAACTGGTGGCTATCTGTTCATAACAAACAAACCATCAGGATGAGCTGCTaGCGCTCCTGCTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GVTHNGRNWWLSVHNKQTIRMSC*RSCFSS
Trigger: GGAGCTGAAGCAGGAGCGGCAGCAGCTCATCCTGAT...GGTTTGTTTGTTATGAACAGATAGCCACCAGTTACGGCCGTTGTGTGTAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGAGTTACACACAACGGCCGTAACTGGTGGCTATCTGTTCATAACAAACAAACCAGCATCAGGATGAGCTaGTGCCGCTCCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GVTHNGRNWWLSVHNKQTSIRMS*CRSCFS
Trigger: GCTGAAGCAGGAGCGGCAGCAGCTCATCCTGATGCT...GGTTTGTTTGTTATGAACAGATAGCCACCAGTTACGGCCGTTGTGTGTAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CTGGCCACCCCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCTTGTACAGTTTTTCATaGACCAAAGGAAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: LATPDTQRLQYLGVTHNGLYSFS*TKGRAI
Trigger: GATGGCCCTTCCTTTGGTGCATGAAAAACTGTACAA...GCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGGGGTGGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GAAGACGAAATGAGACAACTTATGGAGCAAGCACAGGATTCACTCCTTACTGGATTACAAGGATGGAAATaGACCCCGCCCCCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: EDEMRQLMEQAQDSLLTGLQGWK*TPPPPW
Trigger: CCAGGGCGGGGGCGGGGTGCATTTCCATCCTTGTAA...TCCAGTAAGGAGTGAATCCTGTGCTTGCTCCATAAGTTGTCTCATTTCGTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp ATCTGCAGAGTGAGCGAACACTCTGACTGCTCTCAAAATAGTAACTGCAGGTGGTCTCTCCCGGCTTCCTaGACAAGTTCCCTGGCAACT +
Preference number: 4 (lower is better)
Translates to: ICRVSEHSDCSQNSNCRWSLPAS*TSSLAT
Trigger: AGTTGCCAGGGAACTTGTGCAGGAAGCCGGGAGAGA...CCACCTGCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCTCACTCTGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GAGGCCCCACAAGGGCAAGACTTAGGTCTGTTTCATCCTCCAGTGAATTCTCAGTTCAGCTCCTCAATCTaGGTCTTCAGCTCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: EAPQGQDLGLFHPPVNSQFSSSI*VFSSAF
Trigger: GAACGCAGAGCTGAAGACCCAGATTGAGGAGCTGAA...CTGAGAATTCACTGGAGGATGAAACAGACCTAAGTCTTGCCCTTGTGGGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GGAGTTACACACAACGGCCGTAACTGGTGGCTATCTGTTCATAACAAACAAACCCCTCCTCCCAGCCCATaGTCACTTCTTCTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: GVTHNGRNWWLSVHNKQTPPPSP*SLLLEL
Trigger: CAGCTCGAGAAGAAGTGACCATGGGCTGGGAGGAGG...GGTTTGTTTGTTATGAACAGATAGCCACCAGTTACGGCCGTTGTGTGTAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CTGGCCACCCCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCAACGGCCGTAACTGGTaGCTATCTGTTCATAACAAA +
Preference number: 4 (lower is better)
Translates to: LATPDTQRLQYLGVTHNGNGRNW*LSVHNK
Trigger: TTTGTTATGAACAGATAGCCACCAGTTACGGCCGTT...GCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGGGGTGGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGGAGAGTCACAGGCCTCTaGAGGGAGAGTTCAAACACC +
Preference number: 4 (lower is better)
Translates to: RLMLAVLNLIVQFFMHQRRVTGL*RESSNT
Trigger: GGTGTTTGAACTCTCCCTCCAGAGGCCTGTGACTCT...CCTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp ATCTGCAGAGTGAGCGAACACTCTGACTGCTCTCAAAATAGTAACTGCAGGTGGCCTGCACAAGTTCCCTaGCAACTGAGGTCACACCAC +
Preference number: 4 (lower is better)
Translates to: ICRVSEHSDCSQNSNCRWPAQVP*QLRSHH
Trigger: GTGGTGTGACCTCAGTTGCCAGGGAACTTGTGCAGG...CCACCTGCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCTCACTCTGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CAA 72 bp ATAACATCTTGGCTCTGCCACCTAACACCTGTGACCTaGGGCAGGTTACCTCTTCTGTGTGCCTCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: ITSWLCHLTPVT*GRLPLLCASVF
Trigger: GAAAACCGAGGCACACAGAAGAGGTAACCTGCCCAAGGTCACAGGTGTTAGGTGGCAGAGCCAAGATGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp GGAGTTACACACAACGGCCGTAACTGGTGGCTATCTGTTCATAACAAACAAACCTCAGCTCTGCGTTCATaGGTTCCAGCCGCTCGGATT +
Preference number: 4 (lower is better)
Translates to: GVTHNGRNWWLSVHNKQTSALRS*VPAARI
Trigger: AATCCGAGCGGCTGGAACTCATGAACGCAGAGCTGA...GGTTTGTTTGTTATGAACAGATAGCCACCAGTTACGGCCGTTGTGTGTAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp GAGGCCCCACAAGGGCAAGACTTAGGTCTGTTTCATCCTCCAGTGAATTCTCAGCTAATTCGCCATCTGTaGATTGGGGACAAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: EAPQGQDLGLFHPPVNSQLIRHL*IGDKCC
Trigger: ACAGCACTTGTCCCCAATTCACAGATGGCGAATTAG...CTGAGAATTCACTGGAGGATGAAACAGACCTAAGTCTTGCCCTTGTGGGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp GAACAGGCCTATAGCAGAGGCTCCAAACAGTCTCCGACCCTGAGAGGGCCTTGCAAACCATCTGTAAAATaGGAAGAATCGTGCCTAGTT +
Preference number: 4 (lower is better)
Translates to: EQAYSRGSKQSPTLRGPCKPSVK*EESCLV
Trigger: AACTAGGCACGATTCTTCTCATTTTACAGATGGTTT...GCAAGGCCCTCTCAGGGTCGGAGACTGTTTGGAGCCTCTGCTATAGGCCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp TTCTTGTACATTTCCTTTTGCCCCTGTGCTAGAGTTCCTCCCAAGACTAGGAGGATCATAGTGGGTTGGTaGCAGGAGGAGAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: FLYISFCPCARVPPKTRRIIVGW*QEESHR
Trigger: CCTGTGACTCTCCTCCTGTCACCAACCCACTATGAT...CCTCCTAGTCTTGGGAGGAACTCTAGCACAGGGGCAAAAGGAAATGTACAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR TCA 90 bp TGTTGTGAAAATGAACAGGCCTATAGCAGAGGCTCCAAACAGTCTCCGACCCTGAAGTTCCCTGGCAACTaGGGTCACACCACAAACACA +
Preference number: 4 (lower is better)
Translates to: CCENEQAYSRGSKQSPTLKFPGN*GHTTNT
Trigger: TGTGTTTGTGGTGTGACCTCAGTTGCCAGGGAACTT...CAGGGTCGGAGACTGTTTGGAGCCTCTGCTATAGGCCTGTTCATTTTCACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCCGTAACTGGTGGAGATGGTTTGCCTaGGACTTGGGAATTCTTAAC +
Preference number: 4 (lower is better)
Translates to: PDTQRLQYLGVTHNGRNWWRWFA*DLGILN
Trigger: GTTAAGAATTCCCAAGTCTCAGGCAAACCATCTCCA...CCAGTTACGGCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGTTCACCTCCAGGAAGTaGAAGGGTGCAATCATGGCC +
Preference number: 4 (lower is better)
Translates to: SADAGCAEPHCTVFHAPKFTSRK*KGAIMA
Trigger: GGCCATGATTGCACCCTTGCACTTCCTGGAGGTGAA...CTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GAAGACGAAATGAGACAACTTATGGAGCAAGCACAGGATTCACTCCTTACTGGAAGCATCAGGATGAGCTaGTGCCGCTCCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: EDEMRQLMEQAQDSLLTGSIRMS*CRSCFS
Trigger: GCTGAAGCAGGAGCGGCAGCAGCTCATCCTGATGCT...TCCAGTAAGGAGTGAATCCTGTGCTTGCTCCATAAGTTGTCTCATTTCGTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GAAGACGAAATGAGACAACTTATGGAGCAAGCACAGGATTCACTCCTTACTGGAGGTTCCTTGGATGGGTaGCCTGGTGAAGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: EDEMRQLMEQAQDSLLTGGSLDG*PGEEAR
Trigger: TCTGGCCTCTTCACCAGGGCACCCATCCAAGGAACC...TCCAGTAAGGAGTGAATCCTGTGCTTGCTCCATAAGTTGTCTCATTTCGTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TCTGCCCATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTAGCGAACACTCTGACTaGTCTCAAAATAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: SAHPRRPRPQFGKQPRFTSEHSD*SQNSNC
Trigger: GCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCT...AGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATGGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp ATCTGCAGAGTGAGCGAACACTCTGACTGCTCTCAAAATAGTAACTGCAGGTGGTCCTCATGCGTGACATaGCTTGAGAACTGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: ICRVSEHSDCSQNSNCRWSSCVT*LENCRV
Trigger: CACTCGGCAGTTCTCAAGGCATGTCACGCATGAGGA...CCACCTGCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCTCACTCTGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGTTTCACAGTAAACTGTAGCCTTTaGAAGCTTCAGTATACAAGG +
Preference number: 4 (lower is better)
Translates to: LWVSSARSSSWVADLSFTVNCSL*KLQYTR
Trigger: CCTTGTATACTGAAGCTTGCAAAGGCTACAGTTTAC...TGTGAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GAAGACGAAATGAGACAACTTATGGAGCAAGCACAGGATTCACTCCTTACTGGACAGAAGGCAACCCGCTaGCACAACCTTCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: EDEMRQLMEQAQDSLLTGQKATR*HNLLPQ
Trigger: CTGTGGCAGAAGGTTGTGGCAGCGGGTTGCCTTCTG...TCCAGTAAGGAGTGAATCCTGTGCTTGCTCCATAAGTTGTCTCATTTCGTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp AATCCATATTCTTACCAACACATACTTGTTTCTGCCCATCTGATAGCTAAAGCGCTGGCAGGGAGCCTGTaGTCACCGAAGGGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: NPYSYQHILVSAHLIAKALAGSL*SPKGPG
Trigger: TCCCGGACCCTTCGGTGACCACAGGCTCCCTGCCAG...CGCTTTAGCTATCAGATGGGCAGAAACAAGTATGTGTTGGTAAGAATATGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CCA 90 bp GAAGACGAAATGAGACAACTTATGGAGCAAGCACAGGATTCACTCCTTACTGGACCCGAGGGTCAACTTTaGTCTCAGCGCTTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: EDEMRQLMEQAQDSLLTGPEGQL*SQRLVP
Trigger: AGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGG...TCCAGTAAGGAGTGAATCCTGTGCTTGCTCCATAAGTTGTCTCATTTCGTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp AGCTCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAGATCATGGGACAACCTaGAACTCTATCCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SSADAGCAEPHCTVFHAPDHGTT*NSIQPS
Trigger: GGAAGGCTGGATAGAGTTCCAGGTTGTCCCATGATC...TGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TGTTGTGAAAATGAACAGGCCTATAGCAGAGGCTCCAAACAGTCTCCGACCCTGGATCATGGGACAACCTaGAACTCTATCCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: CCENEQAYSRGSKQSPTLDHGTT*NSIQPS
Trigger: GGAAGGCTGGATAGAGTTCCAGGTTGTCCCATGATC...CAGGGTCGGAGACTGTTTGGAGCCTCTGCTATAGGCCTGTTCATTTTCACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GGAGTTACACACAACGGCCGTAACTGGTGGCTATCTGTTCATAACAAACAAACCCATCCACTAGGTCACTaGAGGGACCCTGGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: GVTHNGRNWWLSVHNKQTHPLGH*RDPGKS
Trigger: GGACTTACCAGGGTCCCTCCAGTGACCTAGTGGATG...GGTTTGTTTGTTATGAACAGATAGCCACCAGTTACGGCCGTTGTGTGTAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGAAGGAGGCTCTATTTTaGAGATGCCAGCTCCCGGTG +
Preference number: 4 (lower is better)
Translates to: SADAGCAEPHCTVFHAPKKEALF*RCQLPV
Trigger: CACCGGGAGCTGGCATCTCCAAAATAGAGCCTCCTT...CTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCTGAGTTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTCACAGCACAAGTCACTaGTGTGGTGACTTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SEFHPQPRFGCNSWLFLAHSTSH*CGDFGR
Trigger: TCTTCCAAAGTCACCACACCAGTGACTTGTGCTGTG...AGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAACTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp ACAAGTGCTGTTCCCTGGCAAGGCTGCCATGAAGACGAAATGAGACAACTTATGGTTCACTGCTGTTCTTaGCACGAAGTCATCACCAGC +
Preference number: 4 (lower is better)
Translates to: TSAVPWQGCHEDEMRQLMVHCCS*HEVITS
Trigger: GCTGGTGATGACTTCGTGTCAAGAACAGCAGTGAAC...CATAAGTTGTCTCATTTCGTCTTCATGGCAGCCTTGCCAGGGAACAGCACTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp TCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGGTGGTCTCAATCTTCTaGCCTCATGATCCACCCATC +
Preference number: 4 (lower is better)
Translates to: SADAGCAEPHCTVFHAPKVVSIF*PHDPPI
Trigger: GATGGGTGGATCATGAGGTCAGAAGATTGAGACCAC...CTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR TCA 90 bp GAGGCCCCACAAGGGCAAGACTTAGGTCTGTTTCATCCTCCAGTGAATTCTCAGCACATCACCCACCTCTaGAAAATCCTGTCATTCTAC +
Preference number: 4 (lower is better)
Translates to: EAPQGQDLGLFHPPVNSQHITHL*KILSFY
Trigger: GTAGAATGACAGGATTTTTCAGAGGTGGGTGATGTG...CTGAGAATTCACTGGAGGATGAAACAGACCTAAGTCTTGCCCTTGTGGGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR GCA 90 bp AATCCATATTCTTACCAACACATACTTGTTTCTGCCCATCTGATAGCTAAAGCGTCGGTGCCTCTGTCCTaGCTCCTTCAAGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: NPYSYQHILVSAHLIAKASVPLS*LLQVGP
Trigger: GGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA...CGCTTTAGCTATCAGATGGGCAGAAACAAGTATGTGTTGGTAAGAATATGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR GCA 90 bp CAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCATCACCACAGCCGCGTTTTGGTTaGAACTCATGGCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: QFGKQPRFTAVLDTKSSPQPRFG*NSWLFL
Trigger: CAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTG...TGGTGATGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTGTTCGGAGCGAACACTCTGACTaGTCTCAAAATAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: FHPQPRFGCNSWLFLAVRSEHSD*SQNSNC
Trigger: GCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCT...CCGAACAGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AGCTCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCACCCTCAGAAAACATCTaGAGAGTGAGCGAACACTCT +
Preference number: 4 (lower is better)
Translates to: SSADAGCAEPHCTVFHAPPSENI*RVSEHS
Trigger: AGAGTGTTCGCTCACTCTGCAGATGTTTTCTGAGGG...TGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCCGTAACTGGTCAACAAATGGTGTCTaGGAGTTTAATTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PDTQRLQYLGVTHNGRNWSTNGV*EFNSLD
Trigger: GTCCAGGGAATTAAACTCGCAGACACCATTTGTTGA...CCAGTTACGGCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GGAGTTACACACAACGGCCGTAACTGGTGGCTATCTGTTCATAACAAACAAACCTCCTCATGCGTGACATaGCTTGAGAACTGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: GVTHNGRNWWLSVHNKQTSSCVT*LENCRV
Trigger: CACTCGGCAGTTCTCAAGGCATGTCACGCATGAGGA...GGTTTGTTTGTTATGAACAGATAGCCACCAGTTACGGCCGTTGTGTGTAACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp GAAGACGAAATGAGACAACTTATGGAGCAAGCACAGGATTCACTCCTTACTGGAGCTCTATTTTGGAGATaGCAGCTCCCGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: EDEMRQLMEQAQDSLLTGALFWR*QLPVAK
Trigger: CTTGGCCACCGGGAGCTGGCATCTCCAAAATAGAGC...TCCAGTAAGGAGTGAATCCTGTGCTTGCTCCATAAGTTGTCTCATTTCGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCACCCTTGGAGATGGTTTaGCTGAGACTTGGGAATTCT +
Preference number: 4 (lower is better)
Translates to: RPQFGKQPRFTAVLDTKSPLEMV*LRLGNS
Trigger: AGAATTCCCAAGTCTCAGGCAAACCATCTCCAAGGG...TGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AGCTCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCACCCTTGGAGATGGTTTaGCTGAGACTTGGGAATTCT +
Preference number: 4 (lower is better)
Translates to: SSADAGCAEPHCTVFHAPPLEMV*LRLGNS
Trigger: AGAATTCCCAAGTCTCAGGCAAACCATCTCCAAGGG...TGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp ATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGTACATTTCCTTTTaGCCCTGTGCTAGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: IPEGLVHNLGSNPGSLLFLYISF*PCARVP
Trigger: AGGAACTCTAGCACAGGGGCAAAAGGAAATGTACAA...GAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CCA 90 bp GAAGACGAAATGAGACAACTTATGGAGCAAGCACAGGATTCACTCCTTACTGGATCACTTTTCACGGGCTaGGGCCTCTTGCCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: EDEMRQLMEQAQDSLLTGSLFTG*GLLPSF
Trigger: GAAACTGGGCAAGAGGCCCCAGCCCGTGAAAAGTGA...TCCAGTAAGGAGTGAATCCTGTGCTTGCTCCATAAGTTGTCTCATTTCGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp ATCTGCAGAGTGAGCGAACACTCTGACTGCTCTCAAAATAGTAACTGCAGGTGGTCGCCATCTGTGAATTaGGGACAAGTGCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: ICRVSEHSDCSQNSNCRWSPSVN*GQVLFP
Trigger: AGGGAACAGCACTTGTCCCCAATTCACAGATGGCGA...CCACCTGCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCTCACTCTGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp ACAAGTGCTGTTCCCTGGCAAGGCTGCCATGAAGACGAAATGAGACAACTTATGCCGTGTTATCCAGGGTaGTCTCAATCTTCTGACCTC +
Preference number: 4 (lower is better)
Translates to: TSAVPWQGCHEDEMRQLMPCYPG*SQSSDL
Trigger: GAGGTCAGAAGATTGAGACCACCCTGGATAACACGG...CATAAGTTGTCTCATTTCGTCTTCATGGCAGCCTTGCCAGGGAACAGCACTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR TCA 90 bp AAGTCCACTTCATTTTTCTCATGGCTTGAAAAATATCAAAGGATTACAGCGCGAGGATGGGTGCCCTGGTaGAGAGGCCAGAGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: KSTSFFSWLEKYQRITARGWVPW*RGQRRA
Trigger: GGCTCTTCTCTGGCCTCTTCACCAGGGCACCCATCC...TCGCGCTGTAATCCTTTGATATTTTTCAAGCCATGAGAAAAATGAAGTGGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGGTCTGTAAACATTCGGTaGGTATGTGCTTTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RLMLAVLNLIVQFFMHQRSVNIR*VCALEG
Trigger: CCCTTCCAAAGCACATACTCACCGAATGTTTACAGA...CCTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp GGTGGAGGGAAACTGAGAGGAGTGAGCGAGGGAGGGATCACAGGTGTGTTAATCAAACCATCTGTAAAATaGGAAGAATCGTGCCTAGTT +
Preference number: 4 (lower is better)
Translates to: GGGKLRGVSEGGITGVLIKPSVK*EESCLV
Trigger: AACTAGGCACGATTCTTCTCATTTTACAGATGGTTT...GATTAACACACCTGTGATCCCTCCCTCGCTCACTCCTCTCAGTTTCCCTCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCATCACCAGTCGCTTACCTTCTCTaGGCCTCAGTTAAACCATCT +
Preference number: 4 (lower is better)
Translates to: QFGKQPRFTAVLDTKSSPVAYLL*ASVKPS
Trigger: AGATGGTTTAACTGAGGCTCAGAGAAGGTAAGCGAC...TGGTGATGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp GGAGTTACACACAACGGCCGTAACTGGTGGCTATCTGTTCATAACAAACAAACCGTTCACTGCTGTTCTTaGCACGAAGTCATCACCAGC +
Preference number: 4 (lower is better)
Translates to: GVTHNGRNWWLSVHNKQTVHCCS*HEVITS
Trigger: GCTGGTGATGACTTCGTGTCAAGAACAGCAGTGAAC...GGTTTGTTTGTTATGAACAGATAGCCACCAGTTACGGCCGTTGTGTGTAACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp ATCTGCAGAGTGAGCGAACACTCTGACTGCTCTCAAAATAGTAACTGCAGGTGGCCCTCAGAAAACATCTaGAGAGTGAGCGAACACTCT +
Preference number: 4 (lower is better)
Translates to: ICRVSEHSDCSQNSNCRWPSENI*RVSEHS
Trigger: AGAGTGTTCGCTCACTCTGCAGATGTTTTCTGAGGG...CCACCTGCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCTCACTCTGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp ATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCGTAAACTGTAGCCTTTaGAAGCTTCAGTATACAAGG +
Preference number: 4 (lower is better)
Translates to: IPEGLVHNLGSNPGSLLFVNCSL*KLQYTR
Trigger: CCTTGTATACTGAAGCTTGCAAAGGCTACAGTTTAC...GAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GGAGTTACACACAACGGCCGTAACTGGTGGCTATCTGTTCATAACAAACAAACCTCGCCATCTGTGAATTaGGGACAAGTGCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: GVTHNGRNWWLSVHNKQTSPSVN*GQVLFP
Trigger: AGGGAACAGCACTTGTCCCCAATTCACAGATGGCGA...GGTTTGTTTGTTATGAACAGATAGCCACCAGTTACGGCCGTTGTGTGTAACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp AGGCTTTTATACCTCTATTACCCAGATGTGTGTGTAGCCATAAACAATAAAGTAGATGCCAGCTCCCGGTaGCCAAGCACAGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: RLLYLYYPDVCVAINNKVDASSR*PSTGPG
Trigger: CCCTGGTCCTGTGCTTGGCCACCGGGAGCTGGCATC...TACTTTATTGTTTATGGCTACACACACATCTGGGTAATAGAGGTATAAAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR TCA 90 bp AATCCATATTCTTACCAACACATACTTGTTTCTGCCCATCTGATAGCTAAAGCGAACAGTCTCCGACCCTaGGAGGGCCTTGCACCCATT +
Preference number: 4 (lower is better)
Translates to: NPYSYQHILVSAHLIAKANSLRP*EGLAPI
Trigger: AATGGGTGCAAGGCCCTCTCAGGGTCGGAGACTGTT...CGCTTTAGCTATCAGATGGGCAGAAACAAGTATGTGTTGGTAAGAATATGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR GCA 90 bp AATCCATATTCTTACCAACACATACTTGTTTCTGCCCATCTGATAGCTAAAGCGGGTTCCTTGGATGGGTaGCCTGGTGAAGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: NPYSYQHILVSAHLIAKAGSLDG*PGEEAR
Trigger: TCTGGCCTCTTCACCAGGGCACCCATCCAAGGAACC...CGCTTTAGCTATCAGATGGGCAGAAACAAGTATGTGTTGGTAAGAATATGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CCA 90 bp GACTATGTCTGCTTGTCACAAAATAAGTCTTCAACAAATGGTGTCTGCGAGTTTGCAAGGGTGCAATCATaGCCCCGAGGTTGCGGATGT +
Preference number: 4 (lower is better)
Translates to: DYVCLSQNKSSTNGVCEFARVQS*PRGCGC
Trigger: ACATCCGCAACCTCGGGGCCATGATTGCACCCTTGC...AAACTCGCAGACACCATTTGTTGAAGACTTATTTTGTGACAAGCAGACATAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp CAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCATCACCACAGGTTTTATGCACCTaGAGTCAGACTGACAATAAC +
Preference number: 4 (lower is better)
Translates to: QFGKQPRFTAVLDTKSSPQVLCT*SQTDNN
Trigger: GTTATTGTCAGTCTGACTTCAGGTGCATAAAACCTG...TGGTGATGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp ACAAGTGCTGTTCCCTGGCAAGGCTGCCATGAAGACGAAATGAGACAACTTATGTTGTACAGTTTTTCATaGACCAAAGGAAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: TSAVPWQGCHEDEMRQLMLYSFS*TKGRAI
Trigger: GATGGCCCTTCCTTTGGTGCATGAAAAACTGTACAA...CATAAGTTGTCTCATTTCGTCTTCATGGCAGCCTTGCCAGGGAACAGCACTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AATCCATATTCTTACCAACACATACTTGTTTCTGCCCATCTGATAGCTAAAGCGCTCCCGCCTTCCTCATaGGTGACATGCCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: NPYSYQHILVSAHLIAKALPPSS*VTCLEN
Trigger: GTTCTCAAGGCATGTCACGCATGAGGAAGGCGGGAG...CGCTTTAGCTATCAGATGGGCAGAAACAAGTATGTGTTGGTAAGAATATGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CCA 90 bp GACTATGTCTGCTTGTCACAAAATAAGTCTTCAACAAATGGTGTCTGCGAGTTTTCACTTTTCACGGGCTaGGGCCTCTTGCCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: DYVCLSQNKSSTNGVCEFSLFTG*GLLPSF
Trigger: GAAACTGGGCAAGAGGCCCCAGCCCGTGAAAAGTGA...AAACTCGCAGACACCATTTGTTGAAGACTTATTTTGTGACAAGCAGACATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp GAAGACGAAATGAGACAACTTATGGAGCAAGCACAGGATTCACTCCTTACTGGATCCTCAGCCGCGTTTTaGTTGCAACTCATGGCTTTT +
Preference number: 4 (lower is better)
Translates to: EDEMRQLMEQAQDSLLTGSSAAF*LQLMAF
Trigger: AAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGA...TCCAGTAAGGAGTGAATCCTGTGCTTGCTCCATAAGTTGTCTCATTTCGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp TCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGGGAGTCAAGTTTAGTTaGGTAAACTGTAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SADAGCAEPHCTVFHAPKGVKFS*VNCSLC
Trigger: GCAAAGGCTACAGTTTACCCAACTAAACTTGACTCC...CTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp CAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCATCACCAGGAGTCAAGTTTAGTTaGGTAAACTGTAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: QFGKQPRFTAVLDTKSSPGVKFS*VNCSLC
Trigger: GCAAAGGCTACAGTTTACCCAACTAAACTTGACTCC...TGGTGATGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CAA 72 bp CACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTaGACACGAAGTCATCACCAGCAACTAGTTATCCTA +
Preference number: 4 (lower is better)
Translates to: HNLGSNPGSLLF*TRSHHQQLVIL
Trigger: TAGGATAACTAGTTGCTGGTGATGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR TCA 90 bp GAAGACGAAATGAGACAACTTATGGAGCAAGCACAGGATTCACTCCTTACTGGATCTGTAAACATTCGGTaGGTATGTGCTTTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: EDEMRQLMEQAQDSLLTGSVNIR*VCALEG
Trigger: CCCTTCCAAAGCACATACTCACCGAATGTTTACAGA...TCCAGTAAGGAGTGAATCCTGTGCTTGCTCCATAAGTTGTCTCATTTCGTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp CGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGGTCAAATGCTGGCTCTTaGAATGAAGCCTATAATTGT +
Preference number: 4 (lower is better)
Translates to: RLMLAVLNLIVQFFMHQRSNAGS*NEAYNC
Trigger: ACAATTATAGGCTTCATTGCAAGAGCCAGCATTTGA...CCTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp TGTTGTGAAAATGAACAGGCCTATAGCAGAGGCTCCAAACAGTCTCCGACCCTGTTGACAGCATTCTTGTaGAGGCTTTTATACCTCTAT +
Preference number: 4 (lower is better)
Translates to: CCENEQAYSRGSKQSPTLLTAFL*RLLYLY
Trigger: ATAGAGGTATAAAAGCCTGCACAAGAATGCTGTCAA...CAGGGTCGGAGACTGTTTGGAGCCTCTGCTATAGGCCTGTTCATTTTCACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CCA 90 bp AATCCATATTCTTACCAACACATACTTGTTTCTGCCCATCTGATAGCTAAAGCGATCCACACCCTTCCCTaGGTCAGACACACATTGACC +
Preference number: 4 (lower is better)
Translates to: NPYSYQHILVSAHLIAKAIHTLP*VRHTLT
Trigger: GGTCAATGTGTGTCTGACCCAGGGAAGGGTGTGGAT...CGCTTTAGCTATCAGATGGGCAGAAACAAGTATGTGTTGGTAAGAATATGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CCA 90 bp GGAGTTACACACAACGGCCGTAACTGGTGGCTATCTGTTCATAACAAACAAACCGTCAGAACACAAACTTaGCAGCCCATCTTTACAGAA +
Preference number: 4 (lower is better)
Translates to: GVTHNGRNWWLSVHNKQTVRTQT*QPIFTE
Trigger: TTCTGTAAAGATGGGCTGCCAAGTTTGTGTTCTGAC...GGTTTGTTTGTTATGAACAGATAGCCACCAGTTACGGCCGTTGTGTGTAACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR TCA 90 bp AAGTCCACTTCATTTTTCTCATGGCTTGAAAAATATCAAAGGATTACAGCGCGATGTTTCATCCTCCAGTaGATTCTCAGGGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: KSTSFFSWLEKYQRITARCFILQ*ILRAWH
Trigger: GTGCCAGGCCCTGAGAATTCACTGGAGGATGAAACA...TCGCGCTGTAATCCTTTGATATTTTTCAAGCCATGAGAAAAATGAAGTGGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AAGTCCACTTCATTTTTCTCATGGCTTGAAAAATATCAAAGGATTACAGCGCGATTCACCTCCAGGAAGTaGAAGGGTGCAATCATGGCC +
Preference number: 4 (lower is better)
Translates to: KSTSFFSWLEKYQRITARFTSRK*KGAIMA
Trigger: GGCCATGATTGCACCCTTGCACTTCCTGGAGGTGAA...TCGCGCTGTAATCCTTTGATATTTTTCAAGCCATGAGAAAAATGAAGTGGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR GCA 90 bp AGGCTTTTATACCTCTATTACCCAGATGTGTGTGTAGCCATAAACAATAAAGTACTGGGTCTTCAGCTCTaGGTTCATGAGTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: RLLYLYYPDVCVAINNKVLGLQL*VHEFQP
Trigger: CGGCTGGAACTCATGAACGCAGAGCTGAAGACCCAG...TACTTTATTGTTTATGGCTACACACACATCTGGGTAATAGAGGTATAAAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR TCA 90 bp GGAGTTACACACAACGGCCGTAACTGGTGGCTATCTGTTCATAACAAACAAACCAAACCATCTGTAAAATaGGAAGAATCGTGCCTAGTT +
Preference number: 4 (lower is better)
Translates to: GVTHNGRNWWLSVHNKQTKPSVK*EESCLV
Trigger: AACTAGGCACGATTCTTCTCATTTTACAGATGGTTT...GGTTTGTTTGTTATGAACAGATAGCCACCAGTTACGGCCGTTGTGTGTAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp AGGCTTTTATACCTCTATTACCCAGATGTGTGTGTAGCCATAAACAATAAAGTATTTGGTCTCAGCGCTTaGTCCCTCTGGGTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RLLYLYYPDVCVAINNKVFGLSA*SLWVSS
Trigger: TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAA...TACTTTATTGTTTATGGCTACACACACATCTGGGTAATAGAGGTATAAAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CCA 90 bp AATCCATATTCTTACCAACACATACTTGTTTCTGCCCATCTGATAGCTAAAGCGTCCTCAGCCGCGTTTTaGTTGCAACTCATGGCTTTT +
Preference number: 4 (lower is better)
Translates to: NPYSYQHILVSAHLIAKASSAAF*LQLMAF
Trigger: AAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGA...CGCTTTAGCTATCAGATGGGCAGAAACAAGTATGTGTTGGTAAGAATATGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CCA 90 bp AAGTCCACTTCATTTTTCTCATGGCTTGAAAAATATCAAAGGATTACAGCGCGAACATTTTTCCTCTCATaGGGAGGCTCAGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: KSTSFFSWLEKYQRITARTFFLS*GGSASG
Trigger: ACCTGAGGCTGAGCCTCCCCATGAGAGGAAAAATGT...TCGCGCTGTAATCCTTTGATATTTTTCAAGCCATGAGAAAAATGAAGTGGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
3UTR CAA 72 bp TTGTGCTCTTGTGAGAAGGGAAGAGACTATGTCTGCTaGTCACAAAATAAGTCTTCAACAAATGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LCSCEKGRDYVC*SQNKSSTNGVC
Trigger: GCAGACACCATTTGTTGAAGACTTATTTTGTGACAAGCAGACATAGTCTCTTCCCTTCTCACAAGAGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp AAGTCCACTTCATTTTTCTCATGGCTTGAAAAATATCAAAGGATTACAGCGCGACACAACGGCCGTAACTaGTGGCTATCTGTTCATAAC +
Preference number: 4 (lower is better)
Translates to: KSTSFFSWLEKYQRITARHNGRN*WLSVHN
Trigger: GTTATGAACAGATAGCCACCAGTTACGGCCGTTGTG...TCGCGCTGTAATCCTTTGATATTTTTCAAGCCATGAGAAAAATGAAGTGGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CCA 90 bp AATCCATATTCTTACCAACACATACTTGTTTCTGCCCATCTGATAGCTAAAGCGGTCTTTCTCAGGCCATaGTTGCATTCATCAACTCGA +
Preference number: 4 (lower is better)
Translates to: NPYSYQHILVSAHLIAKAVFLRP*LHSSTR
Trigger: TCGAGTTGATGAATGCAACCATGGCCTGAGAAAGAC...CGCTTTAGCTATCAGATGGGCAGAAACAAGTATGTGTTGGTAAGAATATGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CCA 90 bp AGGCTTTTATACCTCTATTACCCAGATGTGTGTGTAGCCATAAACAATAAAGTACCGTGTTATCCAGGGTaGTCTCAATCTTCTGACCTC +
Preference number: 4 (lower is better)
Translates to: RLLYLYYPDVCVAINNKVPCYPG*SQSSDL
Trigger: GAGGTCAGAAGATTGAGACCACCCTGGATAACACGG...TACTTTATTGTTTATGGCTACACACACATCTGGGTAATAGAGGTATAAAAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR GCA 90 bp GACTATGTCTGCTTGTCACAAAATAAGTCTTCAACAAATGGTGTCTGCGAGTTTTTGACAGCATTCTTGTaGAGGCTTTTATACCTCTAT +
Preference number: 4 (lower is better)
Translates to: DYVCLSQNKSSTNGVCEFLTAFL*RLLYLY
Trigger: ATAGAGGTATAAAAGCCTGCACAAGAATGCTGTCAA...AAACTCGCAGACACCATTTGTTGAAGACTTATTTTGTGACAAGCAGACATAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CAA 90 bp CGGCTGCCGCCTCCTGGGCAGGGCCGCGCTGGACCGAGGTGGGTGGGGGCATCACTTTGGTCTCAGCGCTaGGTCCCTCTGGGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: RLPPPGQGRAGPRWVGASLWSQR*VPLGFL
Trigger: GAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAG...TGATGCCCCCACCCACCTCGGTCCAGCGCGGCCCTGCCCAGGAGGCGGCAGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp GGGCATCAGGGCCCCGCAGCACGCCCCTCTCCAGCTTCGCATCAGGGCGAGGGGGTGCGCTCCTTCTTCTaGTTCCGGCATCGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: GHQGPAARPSPASHQGEGVRSFF*FRHRAA
Trigger: AGCAGCCCGATGCCGGAACAAGAAGAAGGAGCGCAC...CCCCTCGCCCTGATGCGAAGCTGGAGAGGGGCGTGCTGCGGGGCCCTGATGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACCGACCCTGAGAGGGCCTaGCACCCATTCCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: RCLCPASFKWGPRQDNPTDPERA*HPFPRQ
Trigger: CTGCCTGGGGAATGGGTGCAAGGCCCTCTCAGGGTC...GGTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp GCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGCTCGAGCAGTGGGTaGCCTTCTGACTCGGGGGTC +
Preference number: 5 (lower is better)
Translates to: ALGPSGFPQPALPPGWLICSSSG*PSDSGV
Trigger: GACCCCCGAGTCAGAAGGCAACCCACTGCTCGAGCA...GATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp GGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCGGGCTGCTGCGACTTaGTTCTTCTCCCGGCGCCTT +
Preference number: 5 (lower is better)
Translates to: GPRQDNPTRGSTLVSALGRAAAT*FFSRRL
Trigger: AAGGCGCCGGGAGAAGAACAAAGTCGCAGCAGCCCG...ACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGCGGGCTGCTGCGACTTaGTTCTTCTCCCGGCGCCTT +
Preference number: 5 (lower is better)
Translates to: LVSALGPSGFPQPALPPGRAAAT*FFSRRL
Trigger: AAGGCGCCGGGAGAAGAACAAAGTCGCAGCAGCCCG...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp GCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCACCCGAGGGTCAACTTaGGTCTCAGCGCTTGGTCCC +
Preference number: 5 (lower is better)
Translates to: ALGPSGFPQPALPPGWLITRGST*VSALGP
Trigger: GGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGT...GATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTTGCTCGAGCAGTGGGTaGCCTTCTGACTCGGGGGTC +
Preference number: 5 (lower is better)
Translates to: PGRTTLPEGQLWSQRLVPCSSSG*PSDSGV
Trigger: GACCCCCGAGTCAGAAGGCAACCCACTGCTCGAGCA...AGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACCTTTGGTCTCAGCGCTaGGTCCCTCTGGGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYLWSQR*VPLGFL
Trigger: GAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAG...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp GGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTACCCGAGGGTCAACTTaGGTCTCAGCGCTTGGTCCC +
Preference number: 5 (lower is better)
Translates to: GPRQDNPTRGSTLVSALGTRGST*VSALGP
Trigger: GGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGT...ACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGGACCCTGAGAGGGCCTaGCACCCATTCCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: PTRGSTLVSALGPSGFPQDPERA*HPFPRQ
Trigger: CTGCCTGGGGAATGGGTGCAAGGCCCTCTCAGGGTC...CTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp GGGGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGATCATGGCCCCGAGGTaGCGGATGTCAGCGTATTTC +
Preference number: 5 (lower is better)
Translates to: GAPGRTTLPEGQLWSQRLIMAPR*RMSAYF
Trigger: GAAATACGCTGACATCCGCAACCTCGGGGCCATGAT...CAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCTGCTCGAGCAGTGGGTaGCCTTCTGACTCGGGGGTC +
Preference number: 5 (lower is better)
Translates to: QLWSQRLVPLGFLSPLFLCSSSG*PSDSGV
Trigger: GACCCCCGAGTCAGAAGGCAACCCACTGCTCGAGCA...GAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACACTGGTGTGGTGACTTaGGAAGACAGCCCACCTGCA +
Preference number: 5 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYTGVVT*EDSPPA
Trigger: TGCAGGTGGGCTGTCTTCCAAAGTCACCACACCAGT...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp GGGGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGACTGGTGTGGTGACTTaGGAAGACAGCCCACCTGCA +
Preference number: 5 (lower is better)
Translates to: GAPGRTTLPEGQLWSQRLTGVVT*EDSPPA
Trigger: TGCAGGTGGGCTGTCTTCCAAAGTCACCACACCAGT...CAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS GCA 90 bp GGGCTGGGGCCTCTTGCCCAGTTTCACCTCCAGGAAGTGCAAGGGTaGAATCATGGCCCCGAGGTTGCGGATGTCAGCGTATTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: GLGPLAQFHLQEVQG*NHGPEVADVSVFQL
Trigger: GAGCTGAAATACGCTGACATCCGCAACCTCGGGGCCATGATTGCACCCTTGCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000558068.1
ENST00000559060.5
ENST00000559773.5
ENST00000651602.1
CDS GCA 90 bp GTCCATGTTGCCGGTGGACCTCACTTTTCACGGGCTGGGGCCTCTTaGCCAGTTTCACCTCCAGGAAGTGCAAGGGTGCAATCATGGCCC +
Preference number: 5 (lower is better)
Translates to: VHVAGGPHFSRAGAS*PVSPPGSARVQSWP
Trigger: GGGCCATGATTGCACCCTTGCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAGCCCGTGAAAAGTGAGGTCCACCGGCAACATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558068.1
ENST00000559773.5
CDS-3UTR CAA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGATCATGGCCCCGAGGTaGCGGATGTCAGCGTATTTC +
Preference number: 5 (lower is better)
Translates to: LVSALGPSGFPQPALPPGIMAPR*RMSAYF
Trigger: GAAATACGCTGACATCCGCAACCTCGGGGCCATGAT...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CTGGCCACCCCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCCGGGCTGCTGCGACTTaGTTCTTCTCCCGGCGCCTT +
Preference number: 5 (lower is better)
Translates to: LATPDTQRLQYLGVTHNGRAAAT*FFSRRL
Trigger: AAGGCGCCGGGAGAAGAACAAAGTCGCAGCAGCCCG...GCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGGGGTGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCGTGCGCTCCTTCTTCTaGTTCCGGCATCGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: QPYPRVNFGLSAWSLWVSVRSFF*FRHRAA
Trigger: AGCAGCCCGATGCCGGAACAAGAAGAAGGAGCGCAC...GGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp ACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCGTGCGCTCCTTCTTCTaGTTCCGGCATCGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: TLPEGQLWSQRLVPLGFLVRSFF*FRHRAA
Trigger: AGCAGCCCGATGCCGGAACAAGAAGAAGGAGCGCAC...GAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCACCCGAGGGTCAACTTaGGTCTCAGCGCTTGGTCCC +
Preference number: 5 (lower is better)
Translates to: QPYPRVNFGLSAWSLWVSTRGST*VSALGP
Trigger: GGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGT...GGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGACCCGAGGGTCAACTTaGGTCTCAGCGCTTGGTCCC +
Preference number: 5 (lower is better)
Translates to: PTRGSTLVSALGPSGFPQTRGST*VSALGP
Trigger: GGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGT...CTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACCGGTTCACTGCTGTTCTaGACACGAAGTCATCACCAG +
Preference number: 5 (lower is better)
Translates to: RCLCPASFKWGPRQDNPTGSLLF*TRSHHQ
Trigger: CTGGTGATGACTTCGTGTCAAGAACAGCAGTGAACC...GGTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp TCGGTGCCTCTGTCCTGCCTCCTTCAAGTGGGGCCCCAGGCAGGACAACCCTACTCCACACCAAGTGTGTaGGGTGGAGGGAAACTGAGA +
Preference number: 5 (lower is better)
Translates to: SVPLSCLLQVGPQAGQPYSTPSV*GGGKLR
Trigger: TCTCAGTTTCCCTCCACCCAACACACTTGGTGTGGA...GTAGGGTTGTCCTGCCTGGGGCCCCACTTGAAGGAGGCAGGACAGAGGCACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS GCA 90 bp GTTTCACCTCCAGGAAGTGCAAGGGTGCAATCATGGCCCCGAGGTTaGGGATGTCAGCGTATTTCAGCTCCTCCACAGTCAGGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: VSPPGSARVQSWPRG*GCQRISAPPQSGPS
Trigger: GCTCGGCCCTGACTGTGGAGGAGCTGAAATACGCTGACATCCGCAACCTCGGGGCCATGATTGCACCCTTGCACTTCCTGGAGGTGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000558068.1
ENST00000559060.5
ENST00000559773.5
ENST00000651602.1
CDS-3UTR CAA 90 bp TCTGCCCATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTTGCTCGAGCAGTGGGTaGCCTTCTGACTCGGGGGTC +
Preference number: 5 (lower is better)
Translates to: SAHPRRPRPQFGKQPRFTCSSSG*PSDSGV
Trigger: GACCCCCGAGTCAGAAGGCAACCCACTGCTCGAGCA...AGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATGGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCCTTTGGTCTCAGCGCTaGGTCCCTCTGGGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: QPYPRVNFGLSAWSLWVSLWSQR*VPLGFL
Trigger: GAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAG...GGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp GGGAAGCCACAGCCAGTGGCACACGGCAGTCCTGTAAGAACATCCACTAGGTCAACCCGAGGGTCAACTTaGGTCTCAGCGCTTGGTCCC +
Preference number: 5 (lower is better)
Translates to: GKPQPVAHGSPVRTSTRSTRGST*VSALGP
Trigger: GGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGT...TGACCTAGTGGATGTTCTTACAGGACTGCCGTGTGCCACTGGCTGTGGCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp GCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTCAGCCGCGTTTTGGTaGCAACTCATGGCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: ALGPSGFPQPALPPGWLISAAFW*QLMAFP
Trigger: AGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGA...GATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS GCA 90 bp GCTCCTCTTCCTCATCTAGCTCACTTTTCACGGGCTGGGGCCTCTTaGCCAGTTTCACCTCCAGGAAGTGCAAGGGTGCAATCATGGCCC +
Preference number: 5 (lower is better)
Translates to: APLPHLAHFSRAGAS*PVSPPGSARVQSWP
Trigger: GGGCCATGATTGCACCCTTGCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAGCCCGTGAAAAGTGAGCTAGATGAGGAAGAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000559060.5
ENST00000651602.1
CDS CCA 90 bp GCCTCTTGCCCAGTTTCACCTCCAGGAAGTGCAAGGGTGCAATCATaGCCCCGAGGTTGCGGATGTCAGCGTATTTCAGCTCCTCCACAG +
Preference number: 5 (lower is better)
Translates to: ASCPVSPPGSARVQS*PRGCGCQRISAPPQ
Trigger: CTGTGGAGGAGCTGAAATACGCTGACATCCGCAACCTCGGGGCCATGATTGCACCCTTGCACTTCCTGGAGGTGAAACTGGGCAAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000558068.1
ENST00000559060.5
ENST00000559773.5
ENST00000651602.1
CDS CCA 90 bp TCAATGAGCCCCAGCATATGGCAGGTTGTACACAACCTGGAAGGGTaGCTAAACCCAGAGGAGGCCCAGGCCCTCACTCCCAGCACTTTC +
Preference number: 5 (lower is better)
Translates to: SMSPSIWQVVHNLEG*LNPEEAQALTPSTF
Trigger: GAAAGTGCTGGGAGTGAGGGCCTGGGCCTCCTCTGGGTTTAGCCACCCTTCCAGGTTGTGTACAACCTGCCATATGCTGGGGCTCATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559773.5
CDS-3UTR CAA 90 bp CCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGATCATGGCCCCGAGGTaGCGGATGTCAGCGTATTTC +
Preference number: 5 (lower is better)
Translates to: PTRGSTLVSALGPSGFPQIMAPR*RMSAYF
Trigger: GAAATACGCTGACATCCGCAACCTCGGGGCCATGAT...CTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCATCATGGCCCCGAGGTaGCGGATGTCAGCGTATTTC +
Preference number: 5 (lower is better)
Translates to: QLWSQRLVPLGFLSPLFLIMAPR*RMSAYF
Trigger: GAAATACGCTGACATCCGCAACCTCGGGGCCATGAT...GAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGTTTCACACTGTTCGGAGGTTCCTaGGATGGGTGCCCTGGTGAA +
Preference number: 5 (lower is better)
Translates to: LWVSSARSSSWVADLSFTLFGGS*DGCPGE
Trigger: TTCACCAGGGCACCCATCCAAGGAACCTCCGAACAG...TGTGAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp TTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTCAGCCGCGTTTTGGTaGCAACTCATGGCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: LVSALGPSGFPQPALPPGSAAFW*QLMAFP
Trigger: AGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGA...CCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp GGCCCCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTGGTTCACTGCTGTTCTaGACACGAAGTCATCACCAG +
Preference number: 5 (lower is better)
Translates to: GPRQDNPTRGSTLVSALGGSLLF*TRSHHQ
Trigger: CTGGTGATGACTTCGTGTCAAGAACAGCAGTGAACC...ACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp ACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCGGCCTCGTCCACAATTaGGGAAGCAACCCAGGTTCA +
Preference number: 5 (lower is better)
Translates to: TLPEGQLWSQRLVPLGFLGLVHN*GSNPGS
Trigger: TGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCC...GAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAGGGCCTCGTCCACAATTaGGGAAGCAACCCAGGTTCA +
Preference number: 5 (lower is better)
Translates to: PTRGSTLVSALGPSGFPQGLVHN*GSNPGS
Trigger: TGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCC...CTGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGGGACCCTGAGAGGGCCTaGCACCCATTCCCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: RLMLAVLNLIVQFFMHQRDPERA*HPFPRQ
Trigger: CTGCCTGGGGAATGGGTGCAAGGCCCTCTCAGGGTC...CCTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CCAGGCAGGACAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTACCCTTGGAGATGGTTaGCCTGAGACTTGGGAATTC +
Preference number: 5 (lower is better)
Translates to: PGRTTLPEGQLWSQRLVPTLGDG*PETWEF
Trigger: GAATTCCCAAGTCTCAGGCAAACCATCTCCAAGGGT...AGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTGTCCTGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp TACAGGACTGAGTACTATGAAGGGTTTACAAGGATGGAAATGCACCCCGCCCCCGTGCGCTCCTTCTTCTaGTTCCGGCATCGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: YRTEYYEGFTRMEMHPAPVRSFF*FRHRAA
Trigger: AGCAGCCCGATGCCGGAACAAGAAGAAGGAGCGCAC...GGGGGCGGGGTGCATTTCCATCCTTGTAAACCCTTCATAGTACTCAGTCCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTGTTCGGAGGTTCCTaGGATGGGTGCCCTGGTGAA +
Preference number: 5 (lower is better)
Translates to: HPRRPRPQFGKQPRFTAVLFGGS*DGCPGE
Trigger: TTCACCAGGGCACCCATCCAAGGAACCTCCGAACAG...AACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCATCAGCCGCGTTTTGGTaGCAACTCATGGCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: PYPRVNFGLSAWSLWVSSSAAFW*QLMAFP
Trigger: AGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGA...TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCTCAATCCTCAGCCGCGTTTaGGTTGCAACTCATGGCTTT +
Preference number: 5 (lower is better)
Translates to: PYPRVNFGLSAWSLWVSSILSRV*VATHGF
Trigger: AAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGAT...TGAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CAACCCTACCCGAGGGTCAACTTTGGTCTCAGCGCTTGGTCCCTCTGGGTTTCCATCCTCAGCCGCGTTTaGGTTGCAACTCATGGCTTT +
Preference number: 5 (lower is better)
Translates to: QPYPRVNFGLSAWSLWVSILSRV*VATHGF
Trigger: AAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGAT...GGAAACCCAGAGGGACCAAGCGCTGAGACCAAAGTTGACCCTCGGGTAGGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp GGGAAGCCACAGCCAGTGGCACACGGCAGTCCTGTAAGAACATCCACTAGGTCACTAACACCTGTGACCTaGGGCAGGTTACCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: GKPQPVAHGSPVRTSTRSLTPVT*GRLPLL
Trigger: CAGAAGAGGTAACCTGCCCAAGGTCACAGGTGTTAG...TGACCTAGTGGATGTTCTTACAGGACTGCCGTGTGCCACTGGCTGTGGCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp GAACAGGCCTATAGCAGAGGCTCCAAACAGTCTCCGACCCTGAGAGGGCCTTGCCATGATCCACCCATCTaGGCCTCCCAACCTTTAATC +
Preference number: 5 (lower is better)
Translates to: EQAYSRGSKQSPTLRGPCHDPPI*ASQPLI
Trigger: GATTAAAGGTTGGGAGGCCAAGATGGGTGGATCATG...GCAAGGCCCTCTCAGGGTCGGAGACTGTTTGGAGCCTCTGCTATAGGCCTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CAA 90 bp CTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGTTTCACATGGGTCAGACACACATaGACCAGGGTAGTTGGTTCA +
Preference number: 5 (lower is better)
Translates to: LWVSSARSSSWVADLSFTWVRHT*TRVVGS
Trigger: TGAACCAACTACCCTGGTCAATGTGTGTCTGACCCA...TGTGAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGTTTCACAGGTTCACTGCTGTTCTaGACACGAAGTCATCACCAG +
Preference number: 5 (lower is better)
Translates to: LWVSSARSSSWVADLSFTGSLLF*TRSHHQ
Trigger: CTGGTGATGACTTCGTGTCAAGAACAGCAGTGAACC...TGTGAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp GGTGGAGGGAAACTGAGAGGAGTGAGCGAGGGAGGGATCACAGGTGTGTTAATCTCCACACCAAGTGTGTaGGGTGGAGGGAAACTGAGA +
Preference number: 5 (lower is better)
Translates to: GGGKLRGVSEGGITGVLISTPSV*GGGKLR
Trigger: TCTCAGTTTCCCTCCACCCAACACACTTGGTGTGGA...GATTAACACACCTGTGATCCCTCCCTCGCTCACTCCTCTCAGTTTCCCTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS GCA 90 bp TTCACATCCCGCCTGAATCCATCCATGAGTTCCTCTAGATCTCCATaGTCCAACCTCAGGCCAGGTTGCCTTGTGCCTTTTGGGCACAGT +
Preference number: 5 (lower is better)
Translates to: FTSRLNPSMSSSRSP*SNLRPGCLVPFGHS
Trigger: ACTGTGCCCAAAAGGCACAAGGCAACCTGGCCTGAGGTTGGAGCATGGAGATCTAGAGGAACTCATGGATGGATTCAGGCGGGATGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559773.5
CDS-3UTR CAA 90 bp GGAGTTACACACAACGGCCGTAACTGGTGGCTATCTGTTCATAACAAACAAACCCGGGCTGCTGCGACTTaGTTCTTCTCCCGGCGCCTT +
Preference number: 5 (lower is better)
Translates to: GVTHNGRNWWLSVHNKQTRAAAT*FFSRRL
Trigger: AAGGCGCCGGGAGAAGAACAAAGTCGCAGCAGCCCG...GGTTTGTTTGTTATGAACAGATAGCCACCAGTTACGGCCGTTGTGTGTAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp TCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGGTGCGCTCCTTCTTCTaGTTCCGGCATCGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: SADAGCAEPHCTVFHAPKVRSFF*FRHRAA
Trigger: AGCAGCCCGATGCCGGAACAAGAAGAAGGAGCGCAC...CTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp TCTGCCCATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTATCCTCAGCCGCGTTTaGGTTGCAACTCATGGCTTT +
Preference number: 5 (lower is better)
Translates to: SAHPRRPRPQFGKQPRFTILSRV*VATHGF
Trigger: AAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGAT...AGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATGGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp TTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTGTTCGGTTCGCCATCTGTGAATaGGGGACAAGTGCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: FHPQPRFGCNSWLFLAVRFAICE*GTSAVP
Trigger: GGGAACAGCACTTGTCCCCAATTCACAGATGGCGAA...CCGAACAGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp GCGCTTGGTCCCTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCAGAGACTATGTCTGCTaGTCACAAAATAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: ALGPSGFPQPALPPGWLIRDYVC*SQNKSS
Trigger: TGAAGACTTATTTTGTGACAAGCAGACATAGTCTCT...GATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAGGGACCAAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp ATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTCCACACCAAGTGTGTaGGGTGGAGGGAAACTGAGA +
Preference number: 5 (lower is better)
Translates to: IPEGLVHNLGSNPGSLLFSTPSV*GGGKLR
Trigger: TCTCAGTTTCCCTCCACCCAACACACTTGGTGTGGA...GAACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp TCTGAGTTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTACTGGTGTGGTGACTTaGGAAGACAGCCCACCTGCA +
Preference number: 5 (lower is better)
Translates to: SEFHPQPRFGCNSWLFLATGVVT*EDSPPA
Trigger: TGCAGGTGGGCTGTCTTCCAAAGTCACCACACCAGT...AGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAACTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS TCA 90 bp GGAGCTAAGGAATCACCCAGGATGACCTCTCTCTTGGAATCTGAATaGCGTAGGTCACGCGGCTTCCAAAAGTCGAGGAGATCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: GAKESPRMTSLLESE*RRSRGFQKSRRSRR
Trigger: CCTTCTGGATCTCCTCGACTTTTGGAAGCCGCGTGACCTACGTCATTCAGATTCCAAGAGAGAGGTCATCCTGGGTGATTCCTTAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267569.5
CDS-3UTR CAA 90 bp GAAGACGAAATGAGACAACTTATGGAGCAAGCACAGGATTCACTCCTTACTGGATGCTCGAGCAGTGGGTaGCCTTCTGACTCGGGGGTC +
Preference number: 5 (lower is better)
Translates to: EDEMRQLMEQAQDSLLTGCSSSG*PSDSGV
Trigger: GACCCCCGAGTCAGAAGGCAACCCACTGCTCGAGCA...TCCAGTAAGGAGTGAATCCTGTGCTTGCTCCATAAGTTGTCTCATTTCGTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCATCACCACTTTGGTCTCAGCGCTaGGTCCCTCTGGGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: QFGKQPRFTAVLDTKSSPLWSQR*VPLGFL
Trigger: GAGGAAACCCAGAGGGACCAAGCGCTGAGACCAAAG...TGGTGATGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp TCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGCTGTTCGGAGGTTCCTaGGATGGGTGCCCTGGTGAA +
Preference number: 5 (lower is better)
Translates to: SADAGCAEPHCTVFHAPKLFGGS*DGCPGE
Trigger: TTCACCAGGGCACCCATCCAAGGAACCTCCGAACAG...CTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp ATCTGCAGAGTGAGCGAACACTCTGACTGCTCTCAAAATAGTAACTGCAGGTGGCTGTTCGGAGGTTCCTaGGATGGGTGCCCTGGTGAA +
Preference number: 5 (lower is better)
Translates to: ICRVSEHSDCSQNSNCRWLFGGS*DGCPGE
Trigger: TTCACCAGGGCACCCATCCAAGGAACCTCCGAACAG...CCACCTGCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCTCACTCTGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp TACAGGACTGAGTACTATGAAGGGTTTACAAGGATGGAAATGCACCCCGCCCCCTTCGCCATCTGTGAATaGGGGACAAGTGCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: YRTEYYEGFTRMEMHPAPFAICE*GTSAVP
Trigger: GGGAACAGCACTTGTCCCCAATTCACAGATGGCGAA...GGGGGCGGGGTGCATTTCCATCCTTGTAAACCCTTCATAGTACTCAGTCCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCCGTAACTGGGACAATCATAGTGGGTaGGTGACAGGAGGAGAGTCA +
Preference number: 5 (lower is better)
Translates to: PDTQRLQYLGVTHNGRNWDNHSG*VTGGES
Trigger: TGACTCTCCTCCTGTCACCAACCCACTATGATTGTC...CCAGTTACGGCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp TGTTGTGAAAATGAACAGGCCTATAGCAGAGGCTCCAAACAGTCTCCGACCCTGGGCCTCGTCCACAATTaGGGAAGCAACCCAGGTTCA +
Preference number: 5 (lower is better)
Translates to: CCENEQAYSRGSKQSPTLGLVHN*GSNPGS
Trigger: TGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCC...CAGGGTCGGAGACTGTTTGGAGCCTCTGCTATAGGCCTGTTCATTTTCACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp GAGGCCCCACAAGGGCAAGACTTAGGTCTGTTTCATCCTCCAGTGAATTCTCAGCTAACACCTGTGACCTaGGGCAGGTTACCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: EAPQGQDLGLFHPPVNSQLTPVT*GRLPLL
Trigger: CAGAAGAGGTAACCTGCCCAAGGTCACAGGTGTTAG...CTGAGAATTCACTGGAGGATGAAACAGACCTAAGTCTTGCCCTTGTGGGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS TCA 90 bp AATCAACCACCAAGCCTCTTCTTGGAGCTAAGGAATCACCCAGGATaGCCTCTCTCTTGGAATCTGAATGACGTAGGTCACGCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: NQPPSLFLELRNHPG*PLSWNLNDVGHAAS
Trigger: GGAAGCCGCGTGACCTACGTCATTCAGATTCCAAGAGAGAGGTCATCCTGGGTGATTCCTTAGCTCCAAGAAGAGGCTTGGTGGTTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267569.5
CDS-3UTR CAA 90 bp AGCTCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCACCACCAAGCCTCTTCTaGGAGCTAAGGAATCACCCA +
Preference number: 5 (lower is better)
Translates to: SSADAGCAEPHCTVFHAPPPSLF*ELRNHP
Trigger: TGGGTGATTCCTTAGCTCCAAGAAGAGGCTTGGTGG...TGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267569.5
CDS-3UTR CAA 90 bp CATCCCAGAAGGCCTCGTCCACAATTTGGGAAGCAACCCAGGTTCACTGCTGTTGGTCAGAACACAAACTaGGCAGCCCATCTTTACAGA +
Preference number: 5 (lower is better)
Translates to: HPRRPRPQFGKQPRFTAVGQNTN*AAHLYR
Trigger: TCTGTAAAGATGGGCTGCCAAGTTTGTGTTCTGACC...AACAGCAGTGAACCTGGGTTGCTTCCCAAATTGTGGACGAGGCCTTCTGGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CAA 90 bp AGCTCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCATCAGCCGCGTTTTGGTaGCAACTCATGGCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: SSADAGCAEPHCTVFHAPSAAFW*QLMAFP
Trigger: AGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGA...TGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267569.5
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGGTGGGTCAGACACACATaGACCAGGGTAGTTGGTTCA +
Preference number: 5 (lower is better)
Translates to: RLMLAVLNLIVQFFMHQRWVRHT*TRVVGS
Trigger: TGAACCAACTACCCTGGTCAATGTGTGTCTGACCCA...CCTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCATCACCAGGGTGCACAAAGCAGTaGAGGTCACACATGCACAGT +
Preference number: 5 (lower is better)
Translates to: QFGKQPRFTAVLDTKSSPGCTKQ*RSHMHS
Trigger: ACTGTGCATGTGTGACCTCAACTGCTTTGTGCACCC...TGGTGATGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp ACAAGTGCTGTTCCCTGGCAAGGCTGCCATGAAGACGAAATGAGACAACTTATGGGGTGCACAAAGCAGTaGAGGTCACACATGCACAGT +
Preference number: 5 (lower is better)
Translates to: TSAVPWQGCHEDEMRQLMGCTKQ*RSHMHS
Trigger: ACTGTGCATGTGTGACCTCAACTGCTTTGTGCACCC...CATAAGTTGTCTCATTTCGTCTTCATGGCAGCCTTGCCAGGGAACAGCACTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp TCGGCTGATGCTGGCTGTGCTGAACCTCATTGTACAGTTTTTCATGCACCAAAGGGGTGCACAAAGCAGTaGAGGTCACACATGCACAGT +
Preference number: 5 (lower is better)
Translates to: SADAGCAEPHCTVFHAPKGCTKQ*RSHMHS
Trigger: ACTGTGCATGTGTGACCTCAACTGCTTTGTGCACCC...CTTTGGTGCATGAAAAACTGTACAATGAGGTTCAGCACAGCCAGCATCAGCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp ATCTGCAGAGTGAGCGAACACTCTGACTGCTCTCAAAATAGTAACTGCAGGTGGCTAACACCTGTGACCTaGGGCAGGTTACCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: ICRVSEHSDCSQNSNCRWLTPVT*GRLPLL
Trigger: CAGAAGAGGTAACCTGCCCAAGGTCACAGGTGTTAG...CCACCTGCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCTCACTCTGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CTCTGGGTTTCCTCAGCCCGCTCTTCCTCCTGGGTGGCTGATCTGAGTTTCACATATTTCCAAATTGCTTaGCACAGTTTCTCACTGGCA +
Preference number: 5 (lower is better)
Translates to: LWVSSARSSSWVADLSFTYFQIA*HSFSLA
Trigger: TGCCAGTGAGAAACTGTGCAAAGCAATTTGGAAATA...TGTGAAACTCAGATCAGCCACCCAGGAGGAAGAGCGGGCTGAGGAAACCCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CAA 90 bp CAATTTGGGAAGCAACCCAGGTTCACTGCTGTTCTTGACACGAAGTCATCACCAATCCTCAGCCGCGTTTaGGTTGCAACTCATGGCTTT +
Preference number: 5 (lower is better)
Translates to: QFGKQPRFTAVLDTKSSPILSRV*VATHGF
Trigger: AAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGAT...TGGTGATGACTTCGTGTCAAGAACAGCAGTGAACCTGGGTTGCTTCCCAAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp GGAGTTACACACAACGGCCGTAACTGGTGGCTATCTGTTCATAACAAACAAACCTTCGCCATCTGTGAATaGGGGACAAGTGCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: GVTHNGRNWWLSVHNKQTFAICE*GTSAVP
Trigger: GGGAACAGCACTTGTCCCCAATTCACAGATGGCGAA...GGTTTGTTTGTTATGAACAGATAGCCACCAGTTACGGCCGTTGTGTGTAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp CTGGCCACCCCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCAGAGACTATGTCTGCTaGTCACAAAATAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: LATPDTQRLQYLGVTHNGRDYVC*SQNKSS
Trigger: TGAAGACTTATTTTGTGACAAGCAGACATAGTCTCT...GCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGGGGTGGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp TTCTTGTACATTTCCTTTTGCCCCTGTGCTAGAGTTCCTCCCAAGACTAGGAGGGACAATCATAGTGGGTaGGTGACAGGAGGAGAGTCA +
Preference number: 5 (lower is better)
Translates to: FLYISFCPCARVPPKTRRDNHSG*VTGGES
Trigger: TGACTCTCCTCCTGTCACCAACCCACTATGATTGTC...CCTCCTAGTCTTGGGAGGAACTCTAGCACAGGGGCAAAAGGAAATGTACAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CAA 90 bp ATCTGCAGAGTGAGCGAACACTCTGACTGCTCTCAAAATAGTAACTGCAGGTGGTGGGTCAGACACACATaGACCAGGGTAGTTGGTTCA +
Preference number: 5 (lower is better)
Translates to: ICRVSEHSDCSQNSNCRWWVRHT*TRVVGS
Trigger: TGAACCAACTACCCTGGTCAATGTGTGTCTGACCCA...CCACCTGCAGTTACTATTTTGAGAGCAGTCAGAGTGTTCGCTCACTCTGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp ACAAGTGCTGTTCCCTGGCAAGGCTGCCATGAAGACGAAATGAGACAACTTATGCATGATCCACCCATCTaGGCCTCCCAACCTTTAATC +
Preference number: 5 (lower is better)
Translates to: TSAVPWQGCHEDEMRQLMHDPPI*ASQPLI
Trigger: GATTAAAGGTTGGGAGGCCAAGATGGGTGGATCATG...CATAAGTTGTCTCATTTCGTCTTCATGGCAGCCTTGCCAGGGAACAGCACTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CAA 90 bp GGTGGAGGGAAACTGAGAGGAGTGAGCGAGGGAGGGATCACAGGTGTGTTAATCCTGGTTATTTCCAAATaGCTTTGCACAGTTTCTCAC +
Preference number: 5 (lower is better)
Translates to: GGGKLRGVSEGGITGVLILVISK*LCTVSH
Trigger: GTGAGAAACTGTGCAAAGCAATTTGGAAATAACCAG...GATTAACACACCTGTGATCCCTCCCTCGCTCACTCCTCTCAGTTTCCCTCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CAA 90 bp AAGTCCACTTCATTTTTCTCATGGCTTGAAAAATATCAAAGGATTACAGCGCGACGGGCTGCTGCGACTTaGTTCTTCTCCCGGCGCCTT +
Preference number: 5 (lower is better)
Translates to: KSTSFFSWLEKYQRITARRAAAT*FFSRRL
Trigger: AAGGCGCCGGGAGAAGAACAAAGTCGCAGCAGCCCG...TCGCGCTGTAATCCTTTGATATTTTTCAAGCCATGAGAAAAATGAAGTGGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp GGAGTTACACACAACGGCCGTAACTGGTGGCTATCTGTTCATAACAAACAAACCGACAATCATAGTGGGTaGGTGACAGGAGGAGAGTCA +
Preference number: 5 (lower is better)
Translates to: GVTHNGRNWWLSVHNKQTDNHSG*VTGGES
Trigger: TGACTCTCCTCCTGTCACCAACCCACTATGATTGTC...GGTTTGTTTGTTATGAACAGATAGCCACCAGTTACGGCCGTTGTGTGTAACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp ACAAGTGCTGTTCCCTGGCAAGGCTGCCATGAAGACGAAATGAGACAACTTATGGGTCAGAACACAAACTaGGCAGCCCATCTTTACAGA +
Preference number: 5 (lower is better)
Translates to: TSAVPWQGCHEDEMRQLMGQNTN*AAHLYR
Trigger: TCTGTAAAGATGGGCTGCCAAGTTTGTGTTCTGACC...CATAAGTTGTCTCATTTCGTCTTCATGGCAGCCTTGCCAGGGAACAGCACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CAA 90 bp CCCGACACCCAGAGACTACAGTACTTAGGAGTTACACACAACGGCCGTAACTGGTATTTCCAAATTGCTTaGCACAGTTTCTCACTGGCA +
Preference number: 5 (lower is better)
Translates to: PDTQRLQYLGVTHNGRNWYFQIA*HSFSLA
Trigger: TGCCAGTGAGAAACTGTGCAAAGCAATTTGGAAATA...CCAGTTACGGCCGTTGTGTGTAACTCCTAAGTACTGTAGTCTCTGGGTGTCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CAA 90 bp TTCCATCCTCAGCCGCGTTTTGGTTGCAACTCATGGCTTTTCCTGGCTGTTCGGAGAGACTATGTCTGCTaGTCACAAAATAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: FHPQPRFGCNSWLFLAVRRDYVC*SQNKSS
Trigger: TGAAGACTTATTTTGTGACAAGCAGACATAGTCTCT...CCGAACAGCCAGGAAAAGCCATGAGTTGCAACCAAAACGCGGCTGAGGATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp TACAGGACTGAGTACTATGAAGGGTTTACAAGGATGGAAATGCACCCCGCCCCCCTGGTTATTTCCAAATaGCTTTGCACAGTTTCTCAC +
Preference number: 5 (lower is better)
Translates to: YRTEYYEGFTRMEMHPAPLVISK*LCTVSH
Trigger: GTGAGAAACTGTGCAAAGCAATTTGGAAATAACCAG...GGGGGCGGGGTGCATTTCCATCCTTGTAAACCCTTCATAGTACTCAGTCCTGTA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000435893.6
ENST00000651602.1
CDS-3UTR CAA 90 bp GACTATGTCTGCTTGTCACAAAATAAGTCTTCAACAAATGGTGTCTGCGAGTTTACCCTTGGAGATGGTTaGCCTGAGACTTGGGAATTC +
Preference number: 5 (lower is better)
Translates to: DYVCLSQNKSSTNGVCEFTLGDG*PETWEF
Trigger: GAATTCCCAAGTCTCAGGCAAACCATCTCCAAGGGT...AAACTCGCAGACACCATTTGTTGAAGACTTATTTTGTGACAAGCAGACATAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS-3UTR CAA 90 bp AAGTCCACTTCATTTTTCTCATGGCTTGAAAAATATCAAAGGATTACAGCGCGAACCCTTGGAGATGGTTaGCCTGAGACTTGGGAATTC +
Preference number: 5 (lower is better)
Translates to: KSTSFFSWLEKYQRITARTLGDG*PETWEF
Trigger: GAATTCCCAAGTCTCAGGCAAACCATCTCCAAGGGT...TCGCGCTGTAATCCTTTGATATTTTTCAAGCCATGAGAAAAATGAAGTGGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS CAA 90 bp CATAGCAGGAGGAGTGGCAGGCCAGCCTTAACCTCCCCCGCCGCCTaGGGCGCCCTCCTCCCGCGGCCGCTCGCGCTCCTCTCCCCGCGG +
Preference number: 6 (lower is better)
Translates to: HSRRSGRPALTSPAA*GALLPRPLALLSPR
Trigger: CCGCGGGGAGAGGAGCGCGAGCGGCCGCGGGAGGAGGGCGCCCAAGGCGGCGGGGGAGGTTAAGGCTGGCCTGCCACTCCTCCTGCTATG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419727.6
CDS CCA 72 bp CAGCGTATTTCAGCTCCTCCACAGTCAGGGCCGAGCTaGGGAGCCCGGTCAGGGGGCCAAGCCCTGGCAGGG +
Preference number: 6 (lower is better)
Translates to: QRISAPPQSGPS*GARSGGQALAG
Trigger: CCCTGCCAGGGCTTGGCCCCCTGACCGGGCTCCCCAGCTCGGCCCTGACTGTGGAGGAGCTGAAATACGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000558068.1
ENST00000559060.5
ENST00000559773.5
ENST00000651602.1
CDS GCA 72 bp GGCAGGGAGCCTGTGGTCACCGAAGGGTCCGGGATCTaGCCAGGCATCATAGCAGGAGGAGTGGCAGGCCAG +
Preference number: 6 (lower is better)
Translates to: GREPVVTEGSGI*PGIIAGGVAGQ
Trigger: CTGGCCTGCCACTCCTCCTGCTATGATGCCTGGGCAGATCCCGGACCCTTCGGTGACCACAGGCTCCCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000558068.1
ENST00000559060.5
ENST00000559773.5
ENST00000651602.1
CDS GCA 72 bp CAGGTGGGGCGGTGTCGGTTCAGCATCAGGATGAGCTaGTGCCGCTCCTGCTTCAGCTCCTCAATCTGGGTC +
Preference number: 6 (lower is better)
Translates to: QVGRCRFSIRMS*CRSCFSSSIWV
Trigger: GACCCAGATTGAGGAGCTGAAGCAGGAGCGGCAGCAGCTCATCCTGATGCTGAACCGACACCGCCCCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS GCA 72 bp GCCGGTGGACCTCACTTTTCACGGGCTGGGGCCTCTTaGCCAGTTTCACCTCCAGGAAGTGCAAGGGTGCAA +
Preference number: 6 (lower is better)
Translates to: AGGPHFSRAGAS*PVSPPGSARVQ
Trigger: TTGCACCCTTGCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAGCCCGTGAAAAGTGAGGTCCACCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558068.1
ENST00000559773.5
CDS CAA 72 bp TGCCGGTGGACCTCACTTTTCACGGGCTGGGGCCTCTaGCCCAGTTTCACCTCCAGGAAGTGCAAGGGTGCA +
Preference number: 6 (lower is better)
Translates to: CRWTSLFTGWGL*PSFTSRKCKGA
Trigger: TGCACCCTTGCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAGCCCGTGAAAAGTGAGGTCCACCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558068.1
ENST00000559773.5
CDS GCA 72 bp CGTGCGCTCCTTCTTCTTGTTCCGGCATCGGGCTGCTaGGACTTTGTTCTTCTCCCGGCGCCTTTTCCTTCG +
Preference number: 6 (lower is better)
Translates to: RALLLLVPASGC*DFVLLPAPFPS
Trigger: CGAAGGAAAAGGCGCCGGGAGAAGAACAAAGTCGCAGCAGCCCGATGCCGGAACAAGAAGAAGGAGCGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000559060.5
ENST00000651602.1
CDS CCA 72 bp TCTCCTCTTCCTCCTCCTCCACCTCCTCCCAGCCCATaGTCACTTCTTCTCGAGCTGCTCGAGCAGTGGGTT +
Preference number: 6 (lower is better)
Translates to: SPLPPPPPPPSP*SLLLELLEQWV
Trigger: AACCCACTGCTCGAGCAGCTCGAGAAGAAGTGACCATGGGCTGGGAGGAGGTGGAGGAGGAGGAAGAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000651602.1
CDS CCA 72 bp AGTCCATGTTGCCGGTGGACCTCACTTTTCACGGGCTaGGGCCTCTTGCCCAGTTTCACCTCCAGGAAGTGC +
Preference number: 6 (lower is better)
Translates to: SPCCRWTSLFTG*GLLPSFTSRKC
Trigger: GCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAGCCCGTGAAAAGTGAGGTCCACCGGCAACATGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558068.1
ENST00000559773.5
CDS CAA 90 bp AGTCCATGTTGCCGGTGGACCTCACTTTTCACGGGCTGGGGCCTCTaGCCCAGTTTCACCTCCAGGAAGTGCAAGGGTGCAATCATGGCC +
Preference number: 6 (lower is better)
Translates to: SPCCRWTSLFTGWGL*PSFTSRKCKGAIMA
Trigger: GGCCATGATTGCACCCTTGCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAGCCCGTGAAAAGTGAGGTCCACCGGCAACATGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558068.1
ENST00000559773.5
CDS CAA 90 bp AGTTTCACCTCCAGGAAGTGCAAGGGTGCAATCATGGCCCCGAGGTaGCGGATGTCAGCGTATTTCAGCTCCTCCACAGTCAGGGCCGAG +
Preference number: 6 (lower is better)
Translates to: SFTSRKCKGAIMAPR*RMSAYFSSSTVRAE
Trigger: CTCGGCCCTGACTGTGGAGGAGCTGAAATACGCTGACATCCGCAACCTCGGGGCCATGATTGCACCCTTGCACTTCCTGGAGGTGAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000558068.1
ENST00000559060.5
ENST00000559773.5
ENST00000651602.1
CDS CAA 90 bp CGCTCCTCTTCCTCATCTAGCTCACTTTTCACGGGCTGGGGCCTCTaGCCCAGTTTCACCTCCAGGAAGTGCAAGGGTGCAATCATGGCC +
Preference number: 6 (lower is better)
Translates to: RSSSSSSSLFTGWGL*PSFTSRKCKGAIMA
Trigger: GGCCATGATTGCACCCTTGCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAGCCCGTGAAAAGTGAGCTAGATGAGGAAGAGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000559060.5
ENST00000651602.1
CDS GCA 72 bp CCTCTTGCCCAGTTTCACCTCCAGGAAGTGCAAGGGTaGAATCATGGCCCCGAGGTTGCGGATGTCAGCGTA +
Preference number: 6 (lower is better)
Translates to: PLAQFHLQEVQG*NHGPEVADVSV
Trigger: TACGCTGACATCCGCAACCTCGGGGCCATGATTGCACCCTTGCACTTCCTGGAGGTGAAACTGGGCAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000558068.1
ENST00000559060.5
ENST00000559773.5
ENST00000651602.1
CDS CCA 72 bp CGCTCCTCTTCCTCATCTAGCTCACTTTTCACGGGCTaGGGCCTCTTGCCCAGTTTCACCTCCAGGAAGTGC +
Preference number: 6 (lower is better)
Translates to: RSSSSSSSLFTG*GLLPSFTSRKC
Trigger: GCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAGCCCGTGAAAAGTGAGCTAGATGAGGAAGAGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000559060.5
ENST00000651602.1
CDS GCA 72 bp CCAGGAAGTGCAAGGGTGCAATCATGGCCCCGAGGTTaGGGATGTCAGCGTATTTCAGCTCCTCCACAGTCA +
Preference number: 6 (lower is better)
Translates to: PGSARVQSWPRG*GCQRISAPPQS
Trigger: TGACTGTGGAGGAGCTGAAATACGCTGACATCCGCAACCTCGGGGCCATGATTGCACCCTTGCACTTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000558068.1
ENST00000559060.5
ENST00000559773.5
ENST00000651602.1
CDS GCA 72 bp CCTCATCTAGCTCACTTTTCACGGGCTGGGGCCTCTTaGCCAGTTTCACCTCCAGGAAGTGCAAGGGTGCAA +
Preference number: 6 (lower is better)
Translates to: PHLAHFSRAGAS*PVSPPGSARVQ
Trigger: TTGCACCCTTGCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAGCCCGTGAAAAGTGAGCTAGATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000559060.5
ENST00000651602.1
CDS CAA 72 bp TCCAGGAAGTGCAAGGGTGCAATCATGGCCCCGAGGTaGCGGATGTCAGCGTATTTCAGCTCCTCCACAGTC +
Preference number: 6 (lower is better)
Translates to: SRKCKGAIMAPR*RMSAYFSSSTV
Trigger: GACTGTGGAGGAGCTGAAATACGCTGACATCCGCAACCTCGGGGCCATGATTGCACCCTTGCACTTCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000558068.1
ENST00000559060.5
ENST00000559773.5
ENST00000651602.1
CDS CAA 72 bp TCCTCATCTAGCTCACTTTTCACGGGCTGGGGCCTCTaGCCCAGTTTCACCTCCAGGAAGTGCAAGGGTGCA +
Preference number: 6 (lower is better)
Translates to: SSSSSLFTGWGL*PSFTSRKCKGA
Trigger: TGCACCCTTGCACTTCCTGGAGGTGAAACTGGGCAAGAGGCCCCAGCCCGTGAAAAGTGAGCTAGATGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000559060.5
ENST00000651602.1
CDS CCA 72 bp CCAGTTTCACCTCCAGGAAGTGCAAGGGTGCAATCATaGCCCCGAGGTTGCGGATGTCAGCGTATTTCAGCT +
Preference number: 6 (lower is better)
Translates to: PVSPPGSARVQS*PRGCGCQRISA
Trigger: AGCTGAAATACGCTGACATCCGCAACCTCGGGGCCATGATTGCACCCTTGCACTTCCTGGAGGTGAAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267569.5
ENST00000419727.6
ENST00000435893.6
ENST00000437176.5
ENST00000558068.1
ENST00000559060.5
ENST00000559773.5
ENST00000651602.1
CDS GCA 72 bp CGCCTGAATCCATCCATGAGTTCCTCTAGATCTCCATaGTCCAACCTCAGGCCAGGTTGCCTTGTGCCTTTT +
Preference number: 6 (lower is better)
Translates to: RLNPSMSSSRSP*SNLRPGCLVPF
Trigger: AAAAGGCACAAGGCAACCTGGCCTGAGGTTGGAGCATGGAGATCTAGAGGAACTCATGGATGGATTCAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559773.5
CDS TCA 72 bp GAATCACCCAGGATGACCTCTCTCTTGGAATCTGAATaGCGTAGGTCACGCGGCTTCCAAAAGTCGAGGAGA +
Preference number: 6 (lower is better)
Translates to: ESPRMTSLLESE*RRSRGFQKSRR
Trigger: TCTCCTCGACTTTTGGAAGCCGCGTGACCTACGTCATTCAGATTCCAAGAGAGAGGTCATCCTGGGTGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267569.5
CDS TCA 72 bp CCAAGCCTCTTCTTGGAGCTAAGGAATCACCCAGGATaGCCTCTCTCTTGGAATCTGAATGACGTAGGTCAC +
Preference number: 6 (lower is better)
Translates to: PSLFLELRNHPG*PLSWNLNDVGH
Trigger: GTGACCTACGTCATTCAGATTCCAAGAGAGAGGTCATCCTGGGTGATTCCTTAGCTCCAAGAAGAGGCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267569.5