Pregenerated sensors for JARID2-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000271888Ensembl transcript IDs: ENST00000607711.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACACGGCTATCTTTTCTCAGGAGGCAGCCGCCGGGGCTTCACTCCTaGGCCACCAGCGACGTCCTCCAAGCGGGTCGAGCGGAGGCGCGT | + |
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Preference number: 5 (lower is better) Translates to: TRLSFLRRQPPGLHS*ATSDVLQAGRAEAR Trigger: ACGCGCCTCCGCTCGACCCGCTTGGAGGACGTCGCTGGTGGCCCAGGAGTGAAGCCCCGGCGGCTGCCTCCTGAGAAAAGATAGCCGTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS CCA 90 bp | CAGCACGACAGGGGGCTGGAGGCAGGTAAAAAGCAGGCTCTTGCGTaGCCCGGACAGTTGATATTCCTGGCACTCGGTGTTCGAGATGTT | + |
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Preference number: 5 (lower is better) Translates to: QHDRGLEAGKKQALA*PGQLIFLALGVRDV Trigger: AACATCTCGAACACCGAGTGCCAGGAATATCAACTGTCCGGGCCACGCAAGAGCCTGCTTTTTACCTGCCTCCAGCCCCCTGTCGTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS TCA 90 bp | GGCTGGAGGCAGGTAAAAAGCAGGCTCTTGCGTGGCCCGGACAGTTaGTATTCCTGGCACTCGGTGTTCGAGATGTTTCCTTACAATTGC | + |
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Preference number: 5 (lower is better) Translates to: GWRQVKSRLLRGPDS*YSWHSVFEMFPYNC Trigger: GCAATTGTAAGGAAACATCTCGAACACCGAGTGCCAGGAATATCAACTGTCCGGGCCACGCAAGAGCCTGCTTTTTACCTGCCTCCAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS TCA 90 bp | GTGGCCAAGGCGCGATTTGAATCCAGGTCTCTTACCTCCAGTTTCTaGGACCTTTCTAGACACCAAGGTTATCTCTTCAAATACTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: VAKARFESRSLTSSF*DLSRHQGYLFKYCC Trigger: GCAGCAGTATTTGAAGAGATAACCTTGGTGTCTAGAAAGGTCTCAGAAACTGGAGGTAAGAGACCTGGATTCAAATCGCGCCTTGGCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS GCA 90 bp | CGAGACTTGACAAAGTTGTTAATAAGGCGAAGGCCCAAAGCGCTATaGCAGGGCCTGCTACTTCATTTGTTTCAGCGATTAAACCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: RDLTKLLIRRRPKAL*QGLLLHLFQRLNQH Trigger: GTGCTGGTTTAATCGCTGAAACAAATGAAGTAGCAGGCCCTGGCATAGCGCTTTGGGCCTTCGCCTTATTAACAACTTTGTCAAGTCTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS GCA 90 bp | CCTGGCACTCGGTGTTCGAGATGTTTCCTTACAATTGCGTGTCTGTaGGGCTCGGTCTCCATATTCCACTCATTTTTGTCTCAACATTTT | + |
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Preference number: 5 (lower is better) Translates to: PGTRCSRCFLTIACL*GSVSIFHSFLSQHF Trigger: AAAATGTTGAGACAAAAATGAGTGGAATATGGAGACCGAGCCGCACAGACACGCAATTGTAAGGAAACATCTCGAACACCGAGTGCCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS TCA 72 bp | ACGCTCTGTACACAGACGCGAGGCGCTGTCCTGAGGTaGCACCGGCTGCACGGCACAAGCAGCAGGCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: TLCTQTRGAVLR*HRLHGTSSRRR Trigger: GCGGCGCCTGCTGCTTGTGCCGTGCAGCCGGTGTCACCTCAGGACAGCGCCTCGCGTCTGTGTACAGAGCGT 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS CCA 72 bp | TCTTTTCTCAGGAGGCAGCCGCCGGGGCTTCACTCCTaGGCCACCAGCGACGTCCTCCAAGCGGGTCGAGCG | + |
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Preference number: 6 (lower is better) Translates to: SFLRRQPPGLHS*ATSDVLQAGRA Trigger: CGCTCGACCCGCTTGGAGGACGTCGCTGGTGGCCCAGGAGTGAAGCCCCGGCGGCTGCCTCCTGAGAAAAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS TCA 72 bp | GCAGCACGCTCTGTACACAGACGCGAGGCGCTGTCCTaGGGTGACACCGGCTGCACGGCACAAGCAGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: AARSVHRREALS*GDTGCTAQAAG Trigger: GCCTGCTGCTTGTGCCGTGCAGCCGGTGTCACCTCAGGACAGCGCCTCGCGTCTGTGTACAGAGCGTGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS CCA 72 bp | AGGGGGCTGGAGGCAGGTAAAAAGCAGGCTCTTGCGTaGCCCGGACAGTTGATATTCCTGGCACTCGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: RGLEAGKKQALA*PGQLIFLALGV Trigger: AACACCGAGTGCCAGGAATATCAACTGTCCGGGCCACGCAAGAGCCTGCTTTTTACCTGCCTCCAGCCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS CAA 90 bp | ATAAGGCGAAGGCCCAAAGCGCTATGCCAGGGCCTGCTACTTCATTaGTTTCAGCGATTAAACCAGCACGACAGGGGGCTGGAGGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: IRRRPKALCQGLLLH*FQRLNQHDRGLEAG Trigger: ACCTGCCTCCAGCCCCCTGTCGTGCTGGTTTAATCGCTGAAACAAATGAAGTAGCAGGCCCTGGCATAGCGCTTTGGGCCTTCGCCTTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS CAA 72 bp | AGGCCCAAAGCGCTATGCCAGGGCCTGCTACTTCATTaGTTTCAGCGATTAAACCAGCACGACAGGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RPKALCQGLLLH*FQRLNQHDRGL Trigger: CAGCCCCCTGTCGTGCTGGTTTAATCGCTGAAACAAATGAAGTAGCAGGCCCTGGCATAGCGCTTTGGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS CCA 72 bp | CAAGCTCAGAGAGGCTCTCGGTTGCCTTTTGGGAAGTaGCCAAGGCGCGATTTGAATCCAGGTCTCTTACCT | + |
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Preference number: 6 (lower is better) Translates to: QAQRGSRLPFGK*PRRDLNPGLLP Trigger: AGGTAAGAGACCTGGATTCAAATCGCGCCTTGGCCACTTCCCAAAAGGCAACCGAGAGCCTCTCTGAGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS CAA 90 bp | GGGCTGGAGGCAGGTAAAAAGCAGGCTCTTGCGTGGCCCGGACAGTaGATATTCCTGGCACTCGGTGTTCGAGATGTTTCCTTACAATTG | + |
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Preference number: 6 (lower is better) Translates to: GLEAGKKQALAWPGQ*IFLALGVRDVSLQL Trigger: CAATTGTAAGGAAACATCTCGAACACCGAGTGCCAGGAATATCAACTGTCCGGGCCACGCAAGAGCCTGCTTTTTACCTGCCTCCAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS TCA 72 bp | CAGGTAAAAAGCAGGCTCTTGCGTGGCCCGGACAGTTaGTATTCCTGGCACTCGGTGTTCGAGATGTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: QVKSRLLRGPDS*YSWHSVFEMFP Trigger: AGGAAACATCTCGAACACCGAGTGCCAGGAATATCAACTGTCCGGGCCACGCAAGAGCCTGCTTTTTACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS TCA 72 bp | CTCGGTTGCCTTTTGGGAAGTGGCCAAGGCGCGATTTaGATCCAGGTCTCTTACCTCCAGTTTCTGAGACCT | + |
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Preference number: 6 (lower is better) Translates to: LGCLLGSGQGAI*IQVSYLQFLRP Trigger: AGGTCTCAGAAACTGGAGGTAAGAGACCTGGATTCAAATCGCGCCTTGGCCACTTCCCAAAAGGCAACCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS GCA 72 bp | TCCTGGCACTCGGTGTTCGAGATGTTTCCTTACAATTaGGTGTCTGTGCGGCTCGGTCTCCATATTCCACTC | + |
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Preference number: 6 (lower is better) Translates to: SWHSVFEMFPYN*VSVRLGLHIPL Trigger: GAGTGGAATATGGAGACCGAGCCGCACAGACACGCAATTGTAAGGAAACATCTCGAACACCGAGTGCCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS CCA 72 bp | AAACTGACAAGCTCAGAGAGGCTCTCGGTTGCCTTTTaGGAAGTGGCCAAGGCGCGATTTGAATCCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: KLTSSERLSVAF*EVAKARFESRS Trigger: AGACCTGGATTCAAATCGCGCCTTGGCCACTTCCCAAAAGGCAACCGAGAGCCTCTCTGAGCTTGTCAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS CAA 72 bp | TCTCGGTTGCCTTTTGGGAAGTGGCCAAGGCGCGATTaGAATCCAGGTCTCTTACCTCCAGTTTCTGAGACC | + |
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Preference number: 6 (lower is better) Translates to: SRLPFGKWPRRD*NPGLLPPVSET Trigger: GGTCTCAGAAACTGGAGGTAAGAGACCTGGATTCAAATCGCGCCTTGGCCACTTCCCAAAAGGCAACCGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS CAA 72 bp | TTCCTGGCACTCGGTGTTCGAGATGTTTCCTTACAATaGCGTGTCTGTGCGGCTCGGTCTCCATATTCCACT | + |
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Preference number: 6 (lower is better) Translates to: FLALGVRDVSLQ*RVCAARSPYST Trigger: AGTGGAATATGGAGACCGAGCCGCACAGACACGCAATTGTAAGGAAACATCTCGAACACCGAGTGCCAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS CAA 90 bp | CAGTTGATATTCCTGGCACTCGGTGTTCGAGATGTTTCCTTACAATaGCGTGTCTGTGCGGCTCGGTCTCCATATTCCACTCATTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: QLIFLALGVRDVSLQ*RVCAARSPYSTHFC Trigger: ACAAAAATGAGTGGAATATGGAGACCGAGCCGCACAGACACGCAATTGTAAGGAAACATCTCGAACACCGAGTGCCAGGAATATCAACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS GCA 72 bp | CGGTGTTCGAGATGTTTCCTTACAATTGCGTGTCTGTaGGGCTCGGTCTCCATATTCCACTCATTTTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RCSRCFLTIACL*GSVSIFHSFLS Trigger: AGACAAAAATGAGTGGAATATGGAGACCGAGCCGCACAGACACGCAATTGTAAGGAAACATCTCGAACACCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS CAA 72 bp | CACATAATCATCCCCACAGGTTTGATCACCACTAATTaGCAGATGCGGAAACTGACAAGCTCAGAGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: HIIIPTGLITTN*QMRKLTSSERL Trigger: GAGCCTCTCTGAGCTTGTCAGTTTCCGCATCTGCAAATTAGTGGTGATCAAACCTGTGGGGATGATTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS CAA 90 bp | GTTATTTATCACATAATCATCCCCACAGGTTTGATCACCACTAATTaGCAGATGCGGAAACTGACAAGCTCAGAGAGGCTCTCGGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: VIYHIIIPTGLITTN*QMRKLTSSERLSVA Trigger: GGCAACCGAGAGCCTCTCTGAGCTTGTCAGTTTCCGCATCTGCAAATTAGTGGTGATCAAACCTGTGGGGATGATTATGTGATAAATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS GCA 72 bp | ACAAAGTTGTTAATAAGGCGAAGGCCCAAAGCGCTATaGCAGGGCCTGCTACTTCATTTGTTTCAGCGATTA | + |
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Preference number: 6 (lower is better) Translates to: TKLLIRRRPKAL*QGLLLHLFQRL Trigger: TAATCGCTGAAACAAATGAAGTAGCAGGCCCTGGCATAGCGCTTTGGGCCTTCGCCTTATTAACAACTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS TCA 72 bp | GCGCGATTTGAATCCAGGTCTCTTACCTCCAGTTTCTaGGACCTTTCTAGACACCAAGGTTATCTCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: ARFESRSLTSSF*DLSRHQGYLFK Trigger: TTTGAAGAGATAACCTTGGTGTCTAGAAAGGTCTCAGAAACTGGAGGTAAGAGACCTGGATTCAAATCGCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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| CDS CAA 72 bp | GTTACTGTTATTTATCACATAATCATCCCCACAGGTTaGATCACCACTAATTTGCAGATGCGGAAACTGACA | + |
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Preference number: 6 (lower is better) Translates to: VTVIYHIIIPTG*ITTNLQMRKLT Trigger: TGTCAGTTTCCGCATCTGCAAATTAGTGGTGATCAAACCTGTGGGGATGATTATGTGATAAATAACAGTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607711.1 |
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