Pregenerated sensors for IZUMO3 (Homo sapiens)
Ensembl gene IDs: ENSG00000205442Ensembl transcript IDs: ENST00000418122.1, ENST00000543880.7, ENST00000604921.5
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TACAACTCTGGCCAAATTATTTGCTCTCCCATTACTTCCGTTGTCTCAGGATATCACTTAAGAGAATCATaGAAGACTTCTTGTCCATGT | + |
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Preference number: 2 (lower is better) Translates to: YNSGQIICSPITSVVSGYHLRES*KTSCPC Trigger: ACATGGACAAGAAGTCTTTCATGATTCTCTTAAGTG...ATATCCTGAGACAACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGAGTTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| 3UTR-3UTR CAA 90 bp | CTCTCCCATTACTTCCGTTGTCTCAGGATATCAATAAGCATTTTCATTAGAGAAGTTTACCTCCCAGTTTaGTACTTAGAGTCAACACTT | + |
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Preference number: 3 (lower is better) Translates to: LSHYFRCLRISISIFIREVYLPV*YLESTL Trigger: AAGTGTTGACTCTAAGTACAAAACTGGGAGGTAAAC...TTCTCTAATGAAAATGCTTATTGATATCCTGAGACAACGGAAGTAATGGGAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR GCA 90 bp | CAACTCTGGCCAAATTATTTGCTCTCCCATTACTTCCGTTGTCTCAGGATATCATCTAGGAGAGGGAACTaGCAGCTGGGGAGCGGATAC | + |
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Preference number: 4 (lower is better) Translates to: QLWPNYLLSHYFRCLRISSRRGN*QLGSGY Trigger: GTATCCGCTCCCCAGCTGGCAGTTCCCTCTCCTAGA...TGATATCCTGAGACAACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR TCA 90 bp | GTTTACCTCCCAGTTTTGTACTTAGAGTCAACACTTAAGAGAATCATGAAAGACTGCCGTTCAAGCAGCTaGGTTCGGCCGGGGACTTCT | + |
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Preference number: 4 (lower is better) Translates to: VYLPVLYLESTLKRIMKDCRSSS*VRPGTS Trigger: AGAAGTCCCCGGCCGAACTCAGCTGCTTGAACGGCA...GTCTTTCATGATTCTCTTAAGTGTTGACTCTAAGTACAAAACTGGGAGGTAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR TCA 90 bp | GAAAGGGTTTACCTCCCAGTTTTGTACTTAGAGTCAACACTTAAGAGAATCATGTCGGCCGGGGACTTCTaGAGGTATCAGATTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: ERVYLPVLYLESTLKRIMSAGDF*RYQISQ Trigger: CTGGGAAATCTGATACCTTCAGAAGTCCCCGGCCGA...CATGATTCTCTTAAGTGTTGACTCTAAGTACAAAACTGGGAGGTAAACCCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR CCA 90 bp | GTTTACCTCCCAGTTTTGTACTTAGAGTCAACACTTAAGAGAATCATGAAAGACCAGCCTTTGACTCCATaGAAGGCTGAGAGGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VYLPVLYLESTLKRIMKDQPLTP*KAERGR Trigger: CCTGCCCCTCTCAGCCTTCCATGGAGTCAAAGGCTG...GTCTTTCATGATTCTCTTAAGTGTTGACTCTAAGTACAAAACTGGGAGGTAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR TCA 90 bp | TACAACTCTGGCCAAATTATTTGCTCTCCCATTACTTCCGTTGTCTCAGGATATTGGTTCTGGATAGTCTaGCTCCACTTTTCCCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: YNSGQIICSPITSVVSGYWFWIV*LHFSRC Trigger: ACAGCGGGAAAAGTGGAGTCAGACTATCCAGAACCA...ATATCCTGAGACAACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGAGTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR TCA 90 bp | CAACTCTGGCCAAATTATTTGCTCTCCCATTACTTCCGTTGTCTCAGGATATCAATTCTAAACAGCCTTTaGCTCCATGGAAGGCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: QLWPNYLLSHYFRCLRISILNSL*LHGRLR Trigger: TCTCAGCCTTCCATGGAGTCAAAGGCTGTTTAGAAT...TGATATCCTGAGACAACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR CCA 90 bp | CAACTCTGGCCAAATTATTTGCTCTCCCATTACTTCCGTTGTCTCAGGATATCAAGCCTCTTGTCACTGTaGGAGACCTTGAAGCTTAAA | + |
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Preference number: 4 (lower is better) Translates to: QLWPNYLLSHYFRCLRISSLLSL*ETLKLK Trigger: TTTAAGCTTCAAGGTCTCCCACAGTGACAAGAGGCT...TGATATCCTGAGACAACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR TCA 90 bp | TTCTGTACAACTCTGGCCAAATTATTTGCTCTCCCATTACTTCCGTTGTCTCAGCACTGTGGGAGACCTTaGAGCTTAAATGAATCATCT | + |
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Preference number: 4 (lower is better) Translates to: FCTTLAKLFALPLLPLSQHCGRP*SLNESS Trigger: AGATGATTCATTTAAGCTTCAAGGTCTCCCACAGTG...CTGAGACAACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGAGTTGTACAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR CCA 90 bp | CAACTCTGGCCAAATTATTTGCTCTCCCATTACTTCCGTTGTCTCAGGATATCATCCAACAATCAAGAATaGGACCTTCAACCACAATGC | + |
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Preference number: 4 (lower is better) Translates to: QLWPNYLLSHYFRCLRISSNNQE*DLQPQC Trigger: GCATTGTGGTTGAAGGTCCCATTCTTGATTGTTGGA...TGATATCCTGAGACAACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR CCA 90 bp | TACAACTCTGGCCAAATTATTTGCTCTCCCATTACTTCCGTTGTCTCAGGATATATTCTCAGCCTTTCTTaGATCCTCGTCTCCACAATA | + |
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Preference number: 4 (lower is better) Translates to: YNSGQIICSPITSVVSGYILSLS*ILVSTI Trigger: TATTGTGGAGACGAGGATCCAAGAAAGGCTGAGAAT...ATATCCTGAGACAACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGAGTTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR TCA 90 bp | GAAAGGGTTTACCTCCCAGTTTTGTACTTAGAGTCAACACTTAAGAGAATCATGCTGTTGCCAGCAATATaGGAAATAGAGCAATCTCTC | + |
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Preference number: 4 (lower is better) Translates to: ERVYLPVLYLESTLKRIMLLPAI*EIEQSL Trigger: GAGAGATTGCTCTATTTCTCATATTGCTGGCAACAG...CATGATTCTCTTAAGTGTTGACTCTAAGTACAAAACTGGGAGGTAAACCCTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR TCA 90 bp | CAACTCTGGCCAAATTATTTGCTCTCCCATTACTTCCGTTGTCTCAGGATATCAACCTTGAAGCTTAAATaGATCATCTCCTTAATCTGC | + |
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Preference number: 4 (lower is better) Translates to: QLWPNYLLSHYFRCLRISTLKLK*IISLIC Trigger: GCAGATTAAGGAGATGATTCATTTAAGCTTCAAGGT...TGATATCCTGAGACAACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGAGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR CCA 90 bp | CTCTCCCATTACTTCCGTTGTCTCAGGATATCAATAAGCATTTTCATTAGAGAATTGGATTCCAGGTTTTaGCAGACATCGAGAAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LSHYFRCLRISISIFIRELDSRF*QTSRSL Trigger: CAAGCTTCTCGATGTCTGCCAAAACCTGGAATCCAA...TTCTCTAATGAAAATGCTTATTGATATCCTGAGACAACGGAAGTAATGGGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR CCA 90 bp | CAACTCTGGCCAAATTATTTGCTCTCCCATTACTTCCGTTGTCTCAGGATATCAGTAATTCTTTCAGTTTaGATTCCAGGTTTTGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: QLWPNYLLSHYFRCLRISVILSV*IPGFGR Trigger: TCTGCCAAAACCTGGAATCCAAACTGAAAGAATTAC...TGATATCCTGAGACAACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR CCA 90 bp | GTTTACCTCCCAGTTTTGTACTTAGAGTCAACACTTAAGAGAATCATGAAAGACGACAGCAGGTTGTCCTaGCAACTAGTTCACTTAGTT | + |
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Preference number: 4 (lower is better) Translates to: VYLPVLYLESTLKRIMKDDSRLS*QLVHLV Trigger: AACTAAGTGAACTAGTTGCCAGGACAACCTGCTGTC...GTCTTTCATGATTCTCTTAAGTGTTGACTCTAAGTACAAAACTGGGAGGTAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR CCA 90 bp | TACAACTCTGGCCAAATTATTTGCTCTCCCATTACTTCCGTTGTCTCAGGATATCTTTCTGTACAACTCTaGCCAAATTATTTGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: YNSGQIICSPITSVVSGYLSVQL*PNYLLS Trigger: GGAGAGCAAATAATTTGGCCAGAGTTGTACAGAAAG...ATATCCTGAGACAACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGAGTTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR GCA 90 bp | CTCTCCCATTACTTCCGTTGTCTCAGGATATCAATAAGCATTTTCATTAGAGAAGACCTTCAACCACAATaGAATCTTCAGAACAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: LSHYFRCLRISISIFIREDLQPQ*NLQNKQ Trigger: TTGCTTGTTCTGAAGATTGCATTGTGGTTGAAGGTC...TTCTCTAATGAAAATGCTTATTGATATCCTGAGACAACGGAAGTAATGGGAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR GCA 90 bp | CTCTCCCATTACTTCCGTTGTCTCAGGATATCAATAAGCATTTTCATTAGAGAATCTGGCCAAATTATTTaGTCTCCCATTACTTCCGTT | + |
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Preference number: 4 (lower is better) Translates to: LSHYFRCLRISISIFIRESGQII*SPITSV Trigger: AACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGA...TTCTCTAATGAAAATGCTTATTGATATCCTGAGACAACGGAAGTAATGGGAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR TCA 90 bp | GTTTACCTCCCAGTTTTGTACTTAGAGTCAACACTTAAGAGAATCATGAAAGACCACTTAAGAGAATCATaGAAGACTTCTTGTCCATGT | + |
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Preference number: 4 (lower is better) Translates to: VYLPVLYLESTLKRIMKDHLRES*KTSCPC Trigger: ACATGGACAAGAAGTCTTTCATGATTCTCTTAAGTG...GTCTTTCATGATTCTCTTAAGTGTTGACTCTAAGTACAAAACTGGGAGGTAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR GCA 90 bp | CTCTCCCATTACTTCCGTTGTCTCAGGATATCAATAAGCATTTTCATTAGAGAAATCTTTCCTGTGCATTaGAACATACCAGCATTACTT | + |
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Preference number: 4 (lower is better) Translates to: LSHYFRCLRISISIFIREIFPVH*NIPALL Trigger: AAGTAATGCTGGTATGTTGCAATGCACAGGAAAGAT...TTCTCTAATGAAAATGCTTATTGATATCCTGAGACAACGGAAGTAATGGGAGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR GCA 90 bp | CTCTCCCATTACTTCCGTTGTCTCAGGATATCAATAAGCATTTTCATTAGAGAAATATTATCTTTCCTGTaGATTGCAACATACCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: LSHYFRCLRISISIFIREILSFL*IATYQH Trigger: ATGCTGGTATGTTGCAATGCACAGGAAAGATAATAT...TTCTCTAATGAAAATGCTTATTGATATCCTGAGACAACGGAAGTAATGGGAGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR CAA 90 bp | TTCTGTACAACTCTGGCCAAATTATTTGCTCTCCCATTACTTCCGTTGTCTCAGCTCCCCGACAGCAGGTaGTCCTGGCAACTAGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: FCTTLAKLFALPLLPLSQLPDSR*SWQLVH Trigger: GTGAACTAGTTGCCAGGACAACCTGCTGTCGGGGAG...CTGAGACAACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGAGTTGTACAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR CAA 90 bp | TTCTGTACAACTCTGGCCAAATTATTTGCTCTCCCATTACTTCCGTTGTCTCAGAACACCCGAAGCCTCTaGTCACTGTGGGAGACCTTG | + |
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Preference number: 5 (lower is better) Translates to: FCTTLAKLFALPLLPLSQNTRSL*SLWETL Trigger: CAAGGTCTCCCACAGTGACAAGAGGCTTCGGGTGTT...CTGAGACAACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGAGTTGTACAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR CAA 90 bp | TTCTGTACAACTCTGGCCAAATTATTTGCTCTCCCATTACTTCCGTTGTCTCAGCATTCTAAACAGCCTTaGACTCCATGGAAGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: FCTTLAKLFALPLLPLSQHSKQP*TPWKAE Trigger: CTCAGCCTTCCATGGAGTCAAAGGCTGTTTAGAATG...CTGAGACAACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGAGTTGTACAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS TCA 90 bp | ATAGTAACACAGCACTTCCCAGTATTACAGCTGTTGCCAGCAATATaGGAAATAGAGCAATCTCTCGATTCTCAGCCTTTCTTGGATCCT | + |
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Preference number: 5 (lower is better) Translates to: IVTQHFPVLQLLPAI*EIEQSLDSQPFLDP Trigger: AGGATCCAAGAAAGGCTGAGAATCGAGAGATTGCTCTATTTCTCATATTGCTGGCAACAGCTGTAATACTGGGAAGTGCTGTGTTACTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000418122.1 ENST00000543880.7 ENST00000604921.5 |
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| CDS-3UTR CAA 90 bp | TACAACTCTGGCCAAATTATTTGCTCTCCCATTACTTCCGTTGTCTCAGGATATTTAGCGACCTTCGTATaGCCTTCATTTTCCTCCGAT | + |
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Preference number: 5 (lower is better) Translates to: YNSGQIICSPITSVVSGYLATFV*PSFSSD Trigger: ATCGGAGGAAAATGAAGGCAATACGAAGGTCGCTAA...ATATCCTGAGACAACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGAGTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR CAA 90 bp | CAACTCTGGCCAAATTATTTGCTCTCCCATTACTTCCGTTGTCTCAGGATATCAGTTTACCTCCCAGTTTaGTACTTAGAGTCAACACTT | + |
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Preference number: 5 (lower is better) Translates to: QLWPNYLLSHYFRCLRISVYLPV*YLESTL Trigger: AAGTGTTGACTCTAAGTACAAAACTGGGAGGTAAAC...TGATATCCTGAGACAACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGAGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR CAA 90 bp | CTCTCCCATTACTTCCGTTGTCTCAGGATATCAATAAGCATTTTCATTAGAGAATTTGGATTCCAGGTTTaGGCAGACATCGAGAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: LSHYFRCLRISISIFIREFGFQV*ADIEKL Trigger: AAGCTTCTCGATGTCTGCCAAAACCTGGAATCCAAA...TTCTCTAATGAAAATGCTTATTGATATCCTGAGACAACGGAAGTAATGGGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR CAA 90 bp | CTCTCCCATTACTTCCGTTGTCTCAGGATATCAATAAGCATTTTCATTAGAGAACTCTGGCCAAATTATTaGCTCTCCCATTACTTCCGT | + |
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Preference number: 5 (lower is better) Translates to: LSHYFRCLRISISIFIRELWPNY*LSHYFR Trigger: ACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGAG...TTCTCTAATGAAAATGCTTATTGATATCCTGAGACAACGGAAGTAATGGGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR CAA 90 bp | TACAACTCTGGCCAAATTATTTGCTCTCCCATTACTTCCGTTGTCTCAGGATATTATCTTTCCTGTGCATaGCAACATACCAGCATTACT | + |
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Preference number: 5 (lower is better) Translates to: YNSGQIICSPITSVVSGYYLSCA*QHTSIT Trigger: AGTAATGCTGGTATGTTGCAATGCACAGGAAAGATA...ATATCCTGAGACAACGGAAGTAATGGGAGAGCAAATAATTTGGCCAGAGTTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS TCA 90 bp | ACATATTCCTTTAGCGACCTTCGTATTGCCTTCATTTTCCTCCGATaGAAGATGCAAAAATGGAATAGTAACACAGCACTTCCCAGTATT | + |
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Preference number: 5 (lower is better) Translates to: TYSFSDLRIAFIFLR*KMQKWNSNTALPSI Trigger: AATACTGGGAAGTGCTGTGTTACTATTCCATTTTTGCATCTTTCATCGGAGGAAAATGAAGGCAATACGAAGGTCGCTAAAGGAATATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000543880.7 ENST00000604921.5 |
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| CDS-3UTR CAA 90 bp | GTTTACCTCCCAGTTTTGTACTTAGAGTCAACACTTAAGAGAATCATGAAAGACCCACAATATTCTCCTTaGAAGCACCTGTTAGTCATG | + |
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Preference number: 5 (lower is better) Translates to: VYLPVLYLESTLKRIMKDPQYSP*KHLLVM Trigger: CATGACTAACAGGTGCTTCAAAGGAGAATATTGTGG...GTCTTTCATGATTCTCTTAAGTGTTGACTCTAAGTACAAAACTGGGAGGTAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR CAA 90 bp | GAAAGGGTTTACCTCCCAGTTTTGTACTTAGAGTCAACACTTAAGAGAATCATGATCGAGAAGCTTGCCTaGATAGATAAAGACACCTTT | + |
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Preference number: 5 (lower is better) Translates to: ERVYLPVLYLESTLKRIMIEKLA*IDKDTF Trigger: AAAGGTGTCTTTATCTATCAAGGCAAGCTTCTCGAT...CATGATTCTCTTAAGTGTTGACTCTAAGTACAAAACTGGGAGGTAAACCCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS-3UTR CAA 90 bp | GAAAGGGTTTACCTCCCAGTTTTGTACTTAGAGTCAACACTTAAGAGAATCATGACATCCTCTATAAATTaGGGGTCACATTCTAAACAG | + |
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Preference number: 5 (lower is better) Translates to: ERVYLPVLYLESTLKRIMTSSIN*GSHSKQ Trigger: CTGTTTAGAATGTGACCCCAAATTTATAGAGGATGT...CATGATTCTCTTAAGTGTTGACTCTAAGTACAAAACTGGGAGGTAAACCCTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000543880.7 |
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| CDS CAA 90 bp | GAAGGTATCAGATTTCCCAGCAAGGAGCCAACATCCTCTATAAATTaGGGGTCACATTCTAAACAGCCTTTGACTCCATGGAAGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: EGIRFPSKEPTSSIN*GSHSKQPLTPWKAE Trigger: CTCAGCCTTCCATGGAGTCAAAGGCTGTTTAGAATGTGACCCCAAATTTATAGAGGATGTTGGCTCCTTGCTGGGAAATCTGATACCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000543880.7 ENST00000604921.5 |
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| CDS TCA 72 bp | CAGCACTTCCCAGTATTACAGCTGTTGCCAGCAATATaGGAAATAGAGCAATCTCTCGATTCTCAGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: QHFPVLQLLPAI*EIEQSLDSQPF Trigger: GAAAGGCTGAGAATCGAGAGATTGCTCTATTTCTCATATTGCTGGCAACAGCTGTAATACTGGGAAGTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000418122.1 ENST00000543880.7 ENST00000604921.5 |
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| CDS CAA 72 bp | AGATTTCCCAGCAAGGAGCCAACATCCTCTATAAATTaGGGGTCACATTCTAAACAGCCTTTGACTCCATGG | + |
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Preference number: 6 (lower is better) Translates to: RFPSKEPTSSIN*GSHSKQPLTPW Trigger: CCATGGAGTCAAAGGCTGTTTAGAATGTGACCCCAAATTTATAGAGGATGTTGGCTCCTTGCTGGGAAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000543880.7 ENST00000604921.5 |
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| CDS CAA 72 bp | GGATTCCAGGTTTTGGCAGACATCGAGAAGCTTGCCTaGATAGATAAAGACACCTTTCCATGTTTCATTGCC | + |
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Preference number: 6 (lower is better) Translates to: GFQVLADIEKLA*IDKDTFPCFIA Trigger: GGCAATGAAACATGGAAAGGTGTCTTTATCTATCAAGGCAAGCTTCTCGATGTCTGCCAAAACCTGGAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000543880.7 ENST00000604921.5 |
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| CDS TCA 72 bp | TTTAGCGACCTTCGTATTGCCTTCATTTTCCTCCGATaGAAGATGCAAAAATGGAATAGTAACACAGCACTT | + |
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Preference number: 6 (lower is better) Translates to: FSDLRIAFIFLR*KMQKWNSNTAL Trigger: AAGTGCTGTGTTACTATTCCATTTTTGCATCTTTCATCGGAGGAAAATGAAGGCAATACGAAGGTCGCTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000418122.1 ENST00000543880.7 ENST00000604921.5 |
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| CDS CAA 72 bp | GTTTCTTCTCCACATATTCCTTTAGCGACCTTCGTATaGCCTTCATTTTCCTCCGATGAAAGATGCAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: VSSPHIPLATFV*PSFSSDERCKN Trigger: ATTTTTGCATCTTTCATCGGAGGAAAATGAAGGCAATACGAAGGTCGCTAAAGGAATATGTGGAGAAGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000543880.7 ENST00000604921.5 |
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| CDS CAA 90 bp | ATTCTTCAAGTTTCTTCTCCACATATTCCTTTAGCGACCTTCGTATaGCCTTCATTTTCCTCCGATGAAAGATGCAAAAATGGAATAGTA | + |
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Preference number: 6 (lower is better) Translates to: ILQVSSPHIPLATFV*PSFSSDERCKNGIV Trigger: TACTATTCCATTTTTGCATCTTTCATCGGAGGAAAATGAAGGCAATACGAAGGTCGCTAAAGGAATATGTGGAGAAGAAACTTGAAGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000543880.7 ENST00000604921.5 |
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