Pregenerated sensors for IZUMO1R (Homo sapiens)
Ensembl gene IDs: ENSG00000183560Ensembl transcript IDs: ENST00000328458.5, ENST00000440961.6
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ATGGGGCAGAGCTGGCGAAGAGGCGGGCCACGGCCACATTGGGGTTaGCCTGAGCAGGCTCAAACCACTTCTGGAGACACCGCCCACTGT | + |
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Preference number: 5 (lower is better) Translates to: MGQSWRRGGPRPHWG*PEQAQTTSGDTAHC Trigger: ACAGTGGGCGGTGTCTCCAGAAGTGGTTTGAGCCTGCTCAGGGCAACCCCAATGTGGCCGTGGCCCGCCTCTTCGCCAGCTCTGCCCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328458.5 ENST00000440961.6 |
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| CDS CCA 90 bp | CAGGAACAGGGAGCAGACCATGATGGTGTAGGACAGTTCCCAGGATaGGGCAGAGCTGGCGAAGAGGCGGGCCACGGCCACATTGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: QEQGADHDGVGQFPG*GRAGEEAGHGHIGV Trigger: AACCCCAATGTGGCCGTGGCCCGCCTCTTCGCCAGCTCTGCCCCATCCTGGGAACTGTCCTACACCATCATGGTCTGCTCCCTGTTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328458.5 ENST00000440961.6 |
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| CDS TCA 90 bp | ACTTCTGGAGACACCGCCCACTGTTCCGTCGCTCAGGGCTGGCTTTaGAGGAATTGCTCCAAGTCTTCTCACACAGGTCAGCTGGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: TSGDTAHCSVAQGWL*RNCSKSSHTGQLGW Trigger: CCACCCCAGCTGACCTGTGTGAGAAGACTTGGAGCAATTCCTTCAAAGCCAGCCCTGAGCGACGGAACAGTGGGCGGTGTCTCCAGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328458.5 ENST00000440961.6 |
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| CDS TCA 90 bp | AGTGCTTCCGACAGCCAGGCATCAGCAGTCCACAGTGAAACAGGCTaGAGTTGTAGAGTGGGGATACATCCAGATGGGCTTCCCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: SASDSQASAVHSETG*SCRVGIHPDGLPSL Trigger: CAAGCTGGGAAGCCCATCTGGATGTATCCCCACTCTACAACTTCAGCCTGTTTCACTGTGGACTGCTGATGCCTGGCTGTCGGAAGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328458.5 ENST00000440961.6 |
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| CDS GCA 72 bp | TCCTGGCACAGCGGCACATTCACAACTCGCTCTCCCTaGCCACTCGGGGCCACTGGCTGGATCCAGGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: SWHSGTFTTRSP*PLGATGWIQGP Trigger: GGGGCCCTGGATCCAGCCAGTGGCCCCGAGTGGGCAGGGAGAGCGAGTTGTGAATGTGCCGCTGTGCCAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440961.6 |
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| CDS CCA 72 bp | GGAGCAGACCATGATGGTGTAGGACAGTTCCCAGGATaGGGCAGAGCTGGCGAAGAGGCGGGCCACGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: GADHDGVGQFPG*GRAGEEAGHGH Trigger: GTGGCCGTGGCCCGCCTCTTCGCCAGCTCTGCCCCATCCTGGGAACTGTCCTACACCATCATGGTCTGCTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328458.5 ENST00000440961.6 |
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| CDS GCA 72 bp | AGCTGGCGAAGAGGCGGGCCACGGCCACATTGGGGTTaGCCTGAGCAGGCTCAAACCACTTCTGGAGACACC | + |
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Preference number: 6 (lower is better) Translates to: SWRRGGPRPHWG*PEQAQTTSGDT Trigger: GGTGTCTCCAGAAGTGGTTTGAGCCTGCTCAGGGCAACCCCAATGTGGCCGTGGCCCGCCTCTTCGCCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328458.5 ENST00000440961.6 |
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| CDS CCA 72 bp | GGAAGTAATGGGAGAAAGGGAGGCACTGGGCCCCTTTaGGGCAGCGGTTCTTCCCCTGACTCCAGTCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GSNGRKGGTGPL*GSGSSPDSSPS Trigger: GCTGGGACTGGAGTCAGGGGAAGAACCGCTGCCCCAAAGGGGCCCAGTGCCTCCCTTTCTCCCATTACTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328458.5 ENST00000440961.6 |
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| CDS TCA 72 bp | GACACCGCCCACTGTTCCGTCGCTCAGGGCTGGCTTTaGAGGAATTGCTCCAAGTCTTCTCACACAGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: DTAHCSVAQGWL*RNCSKSSHTGQ Trigger: CTGACCTGTGTGAGAAGACTTGGAGCAATTCCTTCAAAGCCAGCCCTGAGCGACGGAACAGTGGGCGGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328458.5 ENST00000440961.6 |
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| CDS CCA 72 bp | TCTTCCCCTGACTCCAGTCCCAGCCACCACGCCAGTTaGATTTGCATGTGTAAGACATGCGACAGTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: SSPDSSPSHHAS*ICMCKTCDSLP Trigger: GGGAAGACTGTCGCATGTCTTACACATGCAAATCCAACTGGCGTGGTGGCTGGGACTGGAGTCAGGGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328458.5 ENST00000440961.6 |
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| CDS TCA 72 bp | GACAGCCAGGCATCAGCAGTCCACAGTGAAACAGGCTaGAGTTGTAGAGTGGGGATACATCCAGATGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: DSQASAVHSETG*SCRVGIHPDGL Trigger: AAGCCCATCTGGATGTATCCCCACTCTACAACTTCAGCCTGTTTCACTGTGGACTGCTGATGCCTGGCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328458.5 ENST00000440961.6 |
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