RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITIH3 (Homo sapiens)

Ensembl gene IDs: ENSG00000162267

Ensembl transcript IDs: ENST00000416872.6, ENST00000449956.2, ENST00000463893.1, ENST00000464804.1, ENST00000465243.6, ENST00000465314.5, ENST00000467268.1, ENST00000475931.1, ENST00000493136.1, ENST00000495622.5, ENST00000621946.4

Found 447 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCTGCTGTGGGTCCCAGTTGCCTGTTCCCTGGAGCAGAGGCTCATaGAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGAC +
Preference number: 1 (lower is better)
Translates to: SCCGSQLPVPWSRGS*RHVEAGSCLVSTLD
Trigger: GTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAGGGAACAGGCAACTGGGACCCACAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
3UTR TCA 90 bp TGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTaGGCTGCTGTGGGTCCCAGTTGCCTGTTCCCTGGAGCAGAGGCT +
Preference number: 1 (lower is better)
Translates to: WRGPRSCLPASHPLF*AAVGPSCLFPGAEA
Trigger: AGCCTCTGCTCCAGGGAACAGGCAACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
3UTR CCA 90 bp GTTGCCTGTTCCCTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTaGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTCCCAGCCCC +
Preference number: 1 (lower is better)
Translates to: VACSLEQRLMKACRG*QLSGLDLGLYFPSP
Trigger: GGGGCTGGGAAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAGGGAACAGGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
3UTR CCA 90 bp CAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTaGGTCCCAGTTGCCTGTTCCCTGGAGCAGAGGCTCATGAAGGCA +
Preference number: 1 (lower is better)
Translates to: QEVAFLLAIPSFELL*VPVACSLEQRLMKA
Trigger: TGCCTTCATGAGCCTCTGCTCCAGGGAACAGGCAACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
3UTR GCA 90 bp TCTCCGTTGTCACCTCCACCTGGAAGTCCATCTGAGCATTGGCGATaGCCAGTTTTCCAAAGTAAGTCTTTCTGGTCTTGGAGTCAGGGC +
Preference number: 1 (lower is better)
Translates to: SPLSPPPGSPSEHWR*PVFQSKSFWSWSQG
Trigger: GCCCTGACTCCAAGACCAGAAAGACTTACTTTGGAAAACTGGGCATCGCCAATGCTCAGATGGACTTCCAGGTGGAGGTGACAACGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
3UTR CCA 90 bp GGCCATCCATCCCAACAGGAGCTGGTGTGTCTACTCAAAACAGGTTaGGGACAATGTAGTCAGTGTGGACACCATCAATCAGCCCTTCTC +
Preference number: 1 (lower is better)
Translates to: GHPSQQELVCLLKTG*GQCSQCGHHQSALL
Trigger: GAGAAGGGCTGATTGATGGTGTCCACACTGACTACATTGTCCCCAACCTGTTTTGAGTAGACACACCAGCTCCTGTTGGGATGGATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
3UTR-3UTR TCA 90 bp TGCGTGACTGTGACTGTGTCCAGCCAGCTGAAAGTGCTCGGCACGGCCCTGTTCTGGAGCAGAGGCTCATaGAGGCATGTAGAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: CVTVTVSSQLKVLGTALFWSRGS*RHVEAG
Trigger: GCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCA...GAACAGGGCCGTGCCGAGCACTTTCAGCTGGCTGGACACAGTCACAGTCACGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
3UTR-3UTR TCA 90 bp TGCGTGACTGTGACTGTGTCCAGCCAGCTGAAAGTGCTCGGCACGGCCCTGTTCCCTGTGACTGCATCCTaGATAAGGCGCAGCACTGTG +
Preference number: 2 (lower is better)
Translates to: CVTVTVSSQLKVLGTALFPVTAS*IRRSTV
Trigger: CACAGTGCTGCGCCTTATTCAGGATGCAGTCACAGG...GAACAGGGCCGTGCCGAGCACTTTCAGCTGGCTGGACACAGTCACAGTCACGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
3UTR-3UTR GCA 90 bp GTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGGCTGTGGGTCCCAGTTaGCTGTTCCCTGGAGCAGAG +
Preference number: 2 (lower is better)
Translates to: VSGEAQEVAFLLAIPSFEAVGPS*LFPGAE
Trigger: CTCTGCTCCAGGGAACAGGCAACTGGGACCCACAGC...CTCAAAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
3UTR-3UTR GCA 90 bp GCCTGTTCCCTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCTGTCTAGAGGCCCAAGAAGTTaGCTTCCTGCTAGCCATCCC +
Preference number: 2 (lower is better)
Translates to: ACSLEQRLMKACRGWQLSRGPRS*LPASHP
Trigger: GGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCT...AGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAGGGAACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
3UTR-3UTR CCA 90 bp GTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTGGGTCCCAGTTGCCAGGCTGGCAGCTGTCTaGTCTCGACCTTGGACTTTA +
Preference number: 2 (lower is better)
Translates to: VAFLLAIPSFELLWVPVARLAAV*SRPWTL
Trigger: TAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCT...GGCAACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAAGGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
3UTR-3UTR CCA 90 bp GCCTGTTCCCTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCTGTCTGTCTGGTCTCGACCTTaGACTTTATTTTCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: ACSLEQRLMKACRGWQLSVWSRP*TLFSQP
Trigger: GGGCTGGGAAAATAAAGTCCAAGGTCGAGACCAGAC...AGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAGGGAACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
3UTR-3UTR CCA 90 bp CTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTAAGGCATGTAGAGGCTaGCAGCTGTCTGGTCTCGAC +
Preference number: 2 (lower is better)
Translates to: LCQWRGPRSCLPASHPLFKACRG*QLSGLD
Trigger: GTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTT...AAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
3UTR-3UTR CCA 90 bp ACCTGGTGTAGGACGACCACGAAGGTAACCCCATCTCCAAAGGAGACCACCATGGTCTGGTCTCGACCTTaGACTTTATTTTCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: TWCRTTTKVTPSPKETTMVWSRP*TLFSQP
Trigger: GGGCTGGGAAAATAAAGTCCAAGGTCGAGACCAGAC...CATGGTGGTCTCCTTTGGAGATGGGGTTACCTTCGTGGTCGTCCTACACCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621946.4
3UTR-3UTR CCA 90 bp AGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATGCTGCAAAGTAAGTCTTTCTaGTCTTGGAGTCAGGGCTGC +
Preference number: 2 (lower is better)
Translates to: SPSPLLWTNQQTTFVPMLQSKSF*SWSQGC
Trigger: GCAGCCCTGACTCCAAGACCAGAAAGACTTACTTTG...CAGCATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
3UTR-3UTR GCA 90 bp AAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTCCCTGTGAGGCCTGTGACTaGATCCTGAATAAGGCGCAG +
Preference number: 2 (lower is better)
Translates to: KACRGWQLSGLDLGLYFPCEACD*ILNKAQ
Trigger: CTGCGCCTTATTCAGGATGCAGTCACAGGCCTCACA...GGGAAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
3UTR-3UTR CCA 90 bp AATCAGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATAAGTCTTTCTGGTCTTaGAGTCAGGGCTGCCTCTCT +
Preference number: 2 (lower is better)
Translates to: NQPFSVVVDEPADNLRADKSFWS*SQGCLS
Trigger: AGAGAGGCAGCCCTGACTCCAAGACCAGAAAGACTT...ATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
3UTR-3UTR GCA 90 bp ATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTACAGGCCCCTCTCTGTaGCCATGTTCCAGATGCCAT +
Preference number: 2 (lower is better)
Translates to: MKACRGWQLSGLDLGLYFTGPSL*PCSRCH
Trigger: ATGGCATCTGGAACATGGGCACAGAGAGGGGCCTGT...AAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
3UTR-3UTR GCA 90 bp GTTGATCATCATGGACAGCCCATCCTGCGTGACTGTGACTGTGTCCAGCCAGCTTCTGAGCATTGGCGATaGCCAGTTTTCCAAAGTAAG +
Preference number: 2 (lower is better)
Translates to: VDHHGQPILRDCDCVQPASEHWR*PVFQSK
Trigger: CTTACTTTGGAAAACTGGGCATCGCCAATGCTCAGA...AGCTGGCTGGACACAGTCACAGTCACGCAGGATGGGCTGTCCATGATGATCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
3UTR-3UTR CCA 90 bp TGTAGGACGACCACGAAGGTAACCCCATCTCCAAAGGAGACCACCATGTTCTTCAGTCCATCTGAGCATTaGCGATGCCCAGTTTTCCAA +
Preference number: 2 (lower is better)
Translates to: CRTTTKVTPSPKETTMFFSPSEH*RCPVFQ
Trigger: TTGGAAAACTGGGCATCGCCAATGCTCAGATGGACT...GAAGAACATGGTGGTCTCCTTTGGAGATGGGGTTACCTTCGTGGTCGTCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621946.4
3UTR CCA 72 bp GCCTTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTaGGTCCCAGTTGCCTGTTCCCTGGAGCAGAGGCTC +
Preference number: 3 (lower is better)
Translates to: AFLLAIPSFELL*VPVACSLEQRL
Trigger: GAGCCTCTGCTCCAGGGAACAGGCAACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
3UTR-3UTR CAA 90 bp CAGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATGCTTCAGGGCTGCCTCTCTaGTCGCCAGTGATCTGCCCA +
Preference number: 3 (lower is better)
Translates to: QPFSVVVDEPADNLRADASGLPL*SPVICP
Trigger: TGGGCAGATCACTGGCGACAAGAGAGGCAGCCCTGA...AGCATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
3UTR TCA 72 bp CCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTaGGCTGCTGTGGGTCCCAGTTGCCTGTTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: PRSCLPASHPLF*AAVGPSCLFPG
Trigger: TCCAGGGAACAGGCAACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
3UTR CCA 72 bp GTGTGGACACCATCAATCAGCCCTTCTCCGTTGTTGTaGACGAACCAGCAGACAACCTTCGTGCCGATGCTG +
Preference number: 3 (lower is better)
Translates to: VWTPSISPSPLL*TNQQTTFVPML
Trigger: CAGCATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCTGATTGATGGTGTCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
3UTR CCA 72 bp TCCCTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTaGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTT +
Preference number: 3 (lower is better)
Translates to: SLEQRLMKACRG*QLSGLDLGLYF
Trigger: AAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
3UTR CCA 72 bp AGAAAGTCACGGTGGACAGGATGTTTCTTCCACACCTaGTGTAGGACGACCACGAAGGTAACCCCATCTCCA +
Preference number: 3 (lower is better)
Translates to: RKSRWTGCFFHT*CRTTTKVTPSP
Trigger: TGGAGATGGGGTTACCTTCGTGGTCGTCCTACACCAGGTGTGGAAGAAACATCCTGTCCACCGTGACTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
3UTR-3UTR CAA 90 bp CAATCAGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGAACCATGTTCTTCCTGTaGATCATCATGGACAGCCCA +
Preference number: 3 (lower is better)
Translates to: QSALLRCCGRTSRQPSCRTMFFL*IIMDSP
Trigger: TGGGCTGTCCATGATGATCAACAGGAAGAACATGGT...TCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCTGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
3UTR CCA 72 bp TCCCAACAGGAGCTGGTGTGTCTACTCAAAACAGGTTaGGGACAATGTAGTCAGTGTGGACACCATCAATCA +
Preference number: 3 (lower is better)
Translates to: SQQELVCLLKTG*GQCSQCGHHQS
Trigger: TGATTGATGGTGTCCACACTGACTACATTGTCCCCAACCTGTTTTGAGTAGACACACCAGCTCCTGTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR TCA 90 bp GCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCATCCTCCCAGAGGCCTTaGCCAAGCCGGCCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: APLCAHVPDAIKSGPSIPSSQRP*PSRPSC
Trigger: GCAAGACGGCCGGCTTGGTCAAGGCCTCTGGGAGGA...TGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGCTGTGTCCAGCCAGCTaGAAGTGCTCGGCACGGCCC +
Preference number: 4 (lower is better)
Translates to: VSGEAQEVAFLLAIPSFELCPAS*KCSARP
Trigger: GGGCCGTGCCGAGCACTTTCAGCTGGCTGGACACAG...CTCAAAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp CCAGTTGCCTGTTCCCTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCCCATGCGTCTGTGCTaGCATCCGGTGACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: PVACSLEQRLMKACRGWQPMRLC*HPVTVH
Trigger: GTGGACAGTCACCGGATGTCAGCACAGACGCATGGG...CTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAGGGAACAGGCAACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTGGGTCCCAGTTGCCCCAAGCCGGCCGTCTTaGCCTGGGACACAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: VAFLLAIPSFELLWVPVAPSRPS*PGTQPF
Trigger: AAAAGGCTGTGTCCCAGGGCAAGACGGCCGGCTTGG...GGCAACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAAGGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCGCTGTGGGTCCCAGTTaGCTGTTCCCTGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPAVGPS*LFPGAE
Trigger: CTCTGCTCCAGGGAACAGGCAACTGGGACCCACAGC...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GCCTGTTCCCTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCTGTCTCGCCGGGCAAACCCATaGTTCTCCAGGGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: ACSLEQRLMKACRGWQLSRRANP*FSRAMF
Trigger: GAACATGGCCCTGGAGAACCATGGGTTTGCCCGGCG...AGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAGGGAACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CCAGCTGAAAGTGCTCGGCACGGCCCTGTTCCACAGGGTGATCTTCTCCGTTGTCGCCGGGCAAACCCATaGTTCTCCAGGGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: PAESARHGPVPQGDLLRCRRANP*FSRAMF
Trigger: GAACATGGCCCTGGAGAACCATGGGTTTGCCCGGCG...ACAACGGAGAAGATCACCCTGTGGAACAGGGCCGTGCCGAGCACTTTCAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR TCA 90 bp CATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCCTCCCAGAGGCCTTaGCCAAGCCGGCCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: HVPDAIKSGPSIPTGAGVSSQRP*PSRPSC
Trigger: GCAAGACGGCCGGCTTGGTCAAGGCCTCTGGGAGGA...CACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTGGGTCCCAGTTGCCCCTTGTTCAGCATACTaGTGCCCCTCAGCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: VAFLLAIPSFELLWVPVAPCSAY*CPSAAR
Trigger: ACGGGCTGCTGAGGGGCATCAGTATGCTGAACAAGG...GGCAACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAAGGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp AACTGTGAGGCCTGTGACTGCATCCTGAATAAGGCGCAGCACTGTGCCTGGGGCCCTTGTTCAGCATACTaGTGCCCCTCAGCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: NCEACDCILNKAQHCAWGPCSAY*CPSAAR
Trigger: ACGGGCTGCTGAGGGGCATCAGTATGCTGAACAAGG...GCCCCAGGCACAGTGCTGCGCCTTATTCAGGATGCAGTCACAGGCCTCACAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR TCA 90 bp CCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACACTGTGTCCAGCCAGCTaGAAGTGCTCGGCACGGCCC +
Preference number: 4 (lower is better)
Translates to: PLCAHVPDAIKSGPSIPTLCPAS*KCSARP
Trigger: GGGCCGTGCCGAGCACTTTCAGCTGGCTGGACACAG...TGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTCTGTGTCCAGCCAGCTaGAAGTGCTCGGCACGGCCC +
Preference number: 4 (lower is better)
Translates to: VPDAIKSGPSIPTGAGVSLCPAS*KCSARP
Trigger: GGGCCGTGCCGAGCACTTTCAGCTGGCTGGACACAG...AGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GCCTGTTCCCTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCTGTCTTGGAGCAGAGGCTCATaGAGGCATGTAGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ACSLEQRLMKACRGWQLSWSRGS*RHVEAG
Trigger: GCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCA...AGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAGGGAACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAGCCATCCCCTCTTTTaGGCTGCTGTGGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPSHPLF*AAVGPS
Trigger: ACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCT...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCGGTGACTTTGCTGCCTaGAGCCACGTTGACCGAGAC +
Preference number: 4 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPGDFAA*SHVDRD
Trigger: GTCTCGGTCAACGTGGCTGCAGGCAGCAAAGTCACC...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAGCTGTGGGTCCCAGTTaGCTGTTCCCTGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: APLCAHVPDAIKSGPSIPAVGPS*LFPGAE
Trigger: CTCTGCTCCAGGGAACAGGCAACTGGGACCCACAGC...TGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTGGGTCCCAGTTAGACCTCGATGCCATTaGCCACCCCTTCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: EVAFLLAIPSFELLWVPVRPRCH*PPLPGG
Trigger: GCCTCCCGGAAGGGGTGGCCAATGGCATCGAGGTCT...AACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAAGGCAACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp TCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTACAACGTCCTGGCCTCCTaGAGGTTCTCGGGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: SRCHKIRAIHPNRSWCVYNVLAS*RFSGVA
Trigger: GGCCACGCCCGAGAACCTCCAGGAGGCCAGGACGTT...GTAGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCCACACCCGTCAGCAGTaGGTTGGCCACCTCCTCATA +
Preference number: 4 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPHTRQQ*VGHLLI
Trigger: TATGAGGAGGTGGCCAACCCACTGCTGACGGGTGTG...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCACACCCGTCAGCAGTaGGTTGGCCACCTCCTCATA +
Preference number: 4 (lower is better)
Translates to: LEQRLMKACRGWQLSGLDHTRQQ*VGHLLI
Trigger: TATGAGGAGGTGGCCAACCCACTGCTGACGGGTGTG...GTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GCCTGTTCCCTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCTGTCTTCCTTCTCCTCGCCATaGGCGTTCTTGCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ACSLEQRLMKACRGWQLSSFSSP*AFLRFS
Trigger: GGAGAAGCGCAAGAACGCCCATGGCGAGGAGAAGGA...AGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAGGGAACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAGAGCAGAGCCAAGATaGGACAGGGCCACCATGCAA +
Preference number: 4 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPRAEPR*DRATMQ
Trigger: TTGCATGGTGGCCCTGTCTCATCTTGGCTCTGCTCT...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GCCTGTTCCCTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCTGTCTAGGTTAGCTCGAAGGTaGCTTTGCTGCCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ACSLEQRLMKACRGWQLSRLARR*LCCLQP
Trigger: TGGCTGCAGGCAGCAAAGTCACCTTCGAGCTAACCT...AGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAGGGAACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp CCAGCTGAAAGTGCTCGGCACGGCCCTGTTCCACAGGGTGATCTTCTCCGTTGTCAGCATCCAGCATGCTaGTTCCCTGAGGCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: PAESARHGPVPQGDLLRCQHPAC*FPEARR
Trigger: TCTTCGAGCCTCAGGGAATCAGCATGCTGGATGCTG...ACAACGGAGAAGATCACCCTGTGGAACAGGGCCGTGCCGAGCACTTTCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR TCA 90 bp GCCTGTTCCCTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCTGTCTATGGCCCTTTTTCCCTaGGAAGGACTTGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: ACSLEQRLMKACRGWQLSMALFP*EGLGEG
Trigger: GCCCTCACCAAGTCCTTCTCAGGGAAAAAGGGCCAT...AGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAGGGAACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTGGGTCCCAGTTGCCACAGGCCCCTCTCTGTaGCCATGTTCCAGATGCCAT +
Preference number: 4 (lower is better)
Translates to: VAFLLAIPSFELLWVPVATGPSL*PCSRCH
Trigger: ATGGCATCTGGAACATGGGCACAGAGAGGGGCCTGT...GGCAACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAAGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp TCTCTCAGCTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCGCCATGGGCGTTCTTaGGCTTCTCCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLSCVSGEAQEVAFLLAIRHGRS*ASPAAA
Trigger: AGCAGCTGCTGGAGAAGCGCAAGAACGCCCATGGCG...GATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAGCTGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp ATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTACTCAAAACAGGTTGGGCGCCATGGGCGTTCTTaGGCTTCTCCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IRAIHPNRSWCVYSKQVGRHGRS*ASPAAA
Trigger: AGCAGCTGCTGGAGAAGCGCAAGAACGCCCATGGCG...CCCAACCTGTTTTGAGTAGACACACCAGCTCCTGTTGGGATGGATGGCCCGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR GCA 90 bp GAAAGTGCTCGGCACGGCCCTGTTCCACAGGGTGATCTTCTCCGTTGTCACCTCAGAGGCCCAAGAAGTTaGCTTCCTGCTAGCCATCCC +
Preference number: 4 (lower is better)
Translates to: ESARHGPVPQGDLLRCHLRGPRS*LPASHP
Trigger: GGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCT...GAGGTGACAACGGAGAAGATCACCCTGTGGAACAGGGCCGTGCCGAGCACTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CCA 90 bp CTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAAGACCTCGATGCCATTaGCCACCCCTTCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LCAHVPDAIKSGPSIPTGRPRCH*PPLPGG
Trigger: GCCTCCCGGAAGGGGTGGCCAATGGCATCGAGGTCT...TCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp TGTAGGACGACCACGAAGGTAACCCCATCTCCAAAGGAGACCACCATGTTCTTCAACGTCCTGGCCTCCTaGAGGTTCTCGGGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: CRTTTKVTPSPKETTMFFNVLAS*RFSGVA
Trigger: GGCCACGCCCGAGAACCTCCAGGAGGCCAGGACGTT...GAAGAACATGGTGGTCTCCTTTGGAGATGGGGTTACCTTCGTGGTCGTCCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CCA 90 bp GCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAGGAGGTGCTCCTCTCTaGGATTCTGTGCTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: APLCAHVPDAIKSGPSIPGGAPL*DSVLLS
Trigger: CGAGAGGAGCACAGAATCCCAGAGAGGAGCACCTCC...TGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CATGGACAGCCCATCCTGCGTGACTGTGACTGTGTCCAGCCAGCTGAAAGTGCTGGAGGTGCTCCTCTCTaGGATTCTGTGCTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: HGQPILRDCDCVQPAESAGGAPL*DSVLLS
Trigger: CGAGAGGAGCACAGAATCCCAGAGAGGAGCACCTCC...AGCACTTTCAGCTGGCTGGACACAGTCACAGTCACGCAGGATGGGCTGTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CCA 90 bp CAGGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCACACCCGTCAGCAGTaGGTTGGCCACCTCCTCATA +
Preference number: 4 (lower is better)
Translates to: QAPLCAHVPDAIKSGPSIHTRQQ*VGHLLI
Trigger: TATGAGGAGGTGGCCAACCCACTGCTGACGGGTGTG...GATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATGCTGGTCGTTGGTGGCCCCATaGCCCTTCACATCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: ALLRCCGRTSRQPSCRCWSLVAP*PFTSAL
Trigger: TAAGGCAGATGTGAAGGGCCATGGGGCCACCAACGA...CCAGCATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CCA 90 bp CTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACGCGCAGCACTGTGCCTaGGGCTTCATCGATGTTGAA +
Preference number: 4 (lower is better)
Translates to: LEQRLMKACRGWQLSGLDAQHCA*GFIDVE
Trigger: TTCAACATCGATGAAGCCCCAGGCACAGTGCTGCGC...GTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GAAAGTGCTCGGCACGGCCCTGTTCCACAGGGTGATCTTCTCCGTTGTCACCTCGCGCAGCACTGTGCCTaGGGCTTCATCGATGTTGAA +
Preference number: 4 (lower is better)
Translates to: ESARHGPVPQGDLLRCHLAQHCA*GFIDVE
Trigger: TTCAACATCGATGAAGCCCCAGGCACAGTGCTGCGC...GAGGTGACAACGGAGAAGATCACCCTGTGGAACAGGGCCGTGCCGAGCACTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR TCA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCGCACGAAGTAGCCATTaGCTATCTGCACGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPARSSH*LSARCQ
Trigger: CTGGCAACGTGCAGATAGTCAATGGCTACTTCGTGC...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACCACTGGAAGGCCTTaGGGTGCAAAGAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: APLCAHVPDAIKSGPSIPTTGRP*GAKKCT
Trigger: CGTGCACTTCTTTGCACCTCAAGGCCTTCCAGTGGT...TGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCATTGTCACCTCCTCTGTaGAGGTCAGGTCGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: APLCAHVPDAIKSGPSIPLSPPL*RSGRWW
Trigger: CCACCAACGACCTGACCTTCACAGAGGAGGTGACAA...TGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416872.6
CDS-3UTR TCA 90 bp CATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGCCCATGCGTCTGTGCTaGCATCCGGTGACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: HVPDAIKSGPSIPTGAGVPMRLC*HPVTVH
Trigger: GTGGACAGTCACCGGATGTCAGCACAGACGCATGGG...CACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTCCCATGCGTCTGTGCTaGCATCCGGTGACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: VPDAIKSGPSIPTGAGVSPMRLC*HPVTVH
Trigger: GTGGACAGTCACCGGATGTCAGCACAGACGCATGGG...AGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp CAGGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCTCTGGGAGCCCCTGGTaGCAATCAGCTGATGGTTCT +
Preference number: 4 (lower is better)
Translates to: QAPLCAHVPDAIKSGPSISGSPW*QSADGS
Trigger: AGAACCATCAGCTGATTGTCACCAGGGGCTCCCAGA...GATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGTGTCCACCTCCTCTGTaGAGGTCAGGTCGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: VSGEAQEVAFLLAIPSFECPPPL*RSGRWW
Trigger: CCACCAACGACCTGACCTTCACAGAGGAGGTGGACA...CTCAAAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp CAGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATGCTTCACAAAGTGATACTTaGGGGACAGGTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: QPFSVVVDEPADNLRADASQSDT*GTGPGP
Trigger: GGGCCCTGGACCTGTCCCTCAAGTATCACTTTGTGA...AGCATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR TCA 90 bp GTTGATCATCATGGACAGCCCATCCTGCGTGACTGTGACTGTGTCCAGCCAGCTAGCCATCCCCTCTTTTaGGCTGCTGTGGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: VDHHGQPILRDCDCVQPASHPLF*AAVGPS
Trigger: ACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCT...AGCTGGCTGGACACAGTCACAGTCACGCAGGATGGGCTGTCCATGATGATCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR GCA 90 bp GAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTGGGTCCCAGTTCTCCTTGGCCGTGTCTaGACGGTTGACGGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: EVAFLLAIPSFELLWVPVLLGRV*TVDGSH
Trigger: ATGAGAGCCGTCAACCGTGCAGACACGGCCAAGGAG...AACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAAGGCAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp TCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTACCCAAGCCGGCCGTCTTaGCCTGGGACACAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: SRCHKIRAIHPNRSWCVYPSRPS*PGTQPF
Trigger: AAAAGGCTGTGTCCCAGGGCAAGACGGCCGGCTTGG...GTAGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp AATCAGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATCCAAGCCGGCCGTCTTaGCCTGGGACACAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: NQPFSVVVDEPADNLRADPSRPS*PGTQPF
Trigger: AAAAGGCTGTGTCCCAGGGCAAGACGGCCGGCTTGG...ATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR GCA 90 bp ACCTGGTGTAGGACGACCACGAAGGTAACCCCATCTCCAAAGGAGACCACCATGGGTGACTTTGCTGCCTaGAGCCACGTTGACCGAGAC +
Preference number: 4 (lower is better)
Translates to: TWCRTTTKVTPSPKETTMGDFAA*SHVDRD
Trigger: GTCTCGGTCAACGTGGCTGCAGGCAGCAAAGTCACC...CATGGTGGTCTCCTTTGGAGATGGGGTTACCTTCGTGGTCGTCCTACACCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR GCA 90 bp CAGGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCTCGTACTTGCCCTTGTaGCTCTTCAGCAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: QAPLCAHVPDAIKSGPSISYLPL*LFSSSS
Trigger: CGAGGAGCTGCTGAAGAGGCACAAGGGCAAGTACGA...GATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp TGCGTGACTGTGACTGTGTCCAGCCAGCTGAAAGTGCTCGGCACGGCCCTGTTCGGTACATCTCGTACTTaGCCTTGTGCCTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: CVTVTVSSQLKVLGTALFGTSRT*PCASSA
Trigger: TGCTGAAGAGGCACAAGGGCAAGTACGAGATGTACC...GAACAGGGCCGTGCCGAGCACTTTCAGCTGGCTGGACACAGTCACAGTCACGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR GCA 90 bp GCCTGTTCCCTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCTGTCTCAGAGTCCTCATAAATaGGCCGGGCAAACCCATGGT +
Preference number: 4 (lower is better)
Translates to: ACSLEQRLMKACRGWQLSQSPHK*AGQTHG
Trigger: ACCATGGGTTTGCCCGGCGCATTTATGAGGACTCTG...AGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAGGGAACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GTCTCTCAGCTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCACCGGTGTGGCTTCTaGATCTTCCCCAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: VSQLCQWRGPRSCLPASHHRCGF*IFPRLV
Trigger: GACAAGCCTGGGGAAGATGCAGAAGCCACACCGGTG...ATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAGCTGAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449956.2
CDS-3UTR GCA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCTGTGAGGCCTGTGACTaGATCCTGAATAAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPCEACD*ILNKAQ
Trigger: CTGCGCCTTATTCAGGATGCAGTCACAGGCCTCACA...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp CAGGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCTCCCCTCTTTTGAGCTaGTGTGGGTCCCAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: QAPLCAHVPDAIKSGPSISPLLS*CGSQLP
Trigger: AGGCAACTGGGACCCACAGCAGCTCAAAAGAGGGGA...GATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCTTCTCGGGCGTGGCCTaGACTAAGTGCTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPFSGVA*TKCSFH
Trigger: ATGGAAAGAGCACTTAGTCCAGGCCACGCCCGAGAA...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGGAGGTTCTCGGGCGTaGCCTGGACTAAGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: AHVPDAIKSGPSIPTGAGGGSRA*PGLSAL
Trigger: AAGAGCACTTAGTCCAGGCCACGCCCGAGAACCTCC...ACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp TTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTGGGTCCCAGTTGCCTGTTCCTCTTCACAAACGTCCTaGCCTCCTGGAGGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: FLLAIPSFELLWVPVACSSSQTS*PPGGSR
Trigger: CCGAGAACCTCCAGGAGGCCAGGACGTTTGTGAAGA...GGAACAGGCAACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCGGAACTTGCCCCCGATaGCATTCCGCACATTCTCTT +
Preference number: 4 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPGTCPR*HSAHSL
Trigger: AAGAGAATGTGCGGAATGCCATCGGGGGCAAGTTCC...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACACGCCGGGCAAACCCATaGTTCTCCAGGGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: PLCAHVPDAIKSGPSIPTRRANP*FSRAMF
Trigger: GAACATGGCCCTGGAGAACCATGGGTTTGCCCGGCG...TGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAGGCTGGCAGCTGTCTaGTCTCGACCTTGGACTTTA +
Preference number: 4 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPRLAAV*SRPWTL
Trigger: TAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCT...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CAGGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCAAGGCATGTAGAGGCTaGCAGCTGTCTGGTCTCGAC +
Preference number: 4 (lower is better)
Translates to: QAPLCAHVPDAIKSGPSIKACRG*QLSGLD
Trigger: GTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTT...GATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CCAGCTGAAAGTGCTCGGCACGGCCCTGTTCCACAGGGTGATCTTCTCCGTTGTTCTTTTGAGCTGCTGTaGGTCCCAGTTGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: PAESARHGPVPQGDLLRCSFELL*VPVACS
Trigger: GGAACAGGCAACTGGGACCCACAGCAGCTCAAAAGA...ACAACGGAGAAGATCACCCTGTGGAACAGGGCCGTGCCGAGCACTTTCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR TCA 90 bp CTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTAGGTTAGCTCGAAGGTaGCTTTGCTGCCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LCQWRGPRSCLPASHPLFRLARR*LCCLQP
Trigger: TGGCTGCAGGCAGCAAAGTCACCTTCGAGCTAACCT...AAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGCAGCATCCAGCATGCTaGTTCCCTGAGGCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: VSGEAQEVAFLLAIPSFEQHPAC*FPEARR
Trigger: TCTTCGAGCCTCAGGGAATCAGCATGCTGGATGCTG...CTCAAAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp ATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTACTCAAAACAGGTTGGGATGGCCCTTTTTCCCTaGGAAGGACTTGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: IRAIHPNRSWCVYSKQVGMALFP*EGLGEG
Trigger: GCCCTCACCAAGTCCTTCTCAGGGAAAAAGGGCCAT...CCCAACCTGTTTTGAGTAGACACACCAGCTCCTGTTGGGATGGATGGCCCGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR TCA 90 bp GTCTCTCAGCTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATACCACTGGAAGGCCTTaGGGTGCAAAGAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: VSQLCQWRGPRSCLPASHTTGRP*GAKKCT
Trigger: CGTGCACTTCTTTGCACCTCAAGGCCTTCCAGTGGT...ATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAGCTGAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp ATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTACTCAAAACAGGTTGGGACCACTGGAAGGCCTTaGGGTGCAAAGAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: IRAIHPNRSWCVYSKQVGTTGRP*GAKKCT
Trigger: CGTGCACTTCTTTGCACCTCAAGGCCTTCCAGTGGT...CCCAACCTGTTTTGAGTAGACACACCAGCTCCTGTTGGGATGGATGGCCCGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR TCA 90 bp CTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGACCTTGTTCAGCATACTaGTGCCCCTCAGCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: LCAHVPDAIKSGPSIPTGPCSAY*CPSAAR
Trigger: ACGGGCTGCTGAGGGGCATCAGTATGCTGAACAAGG...TCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAGTGGAGTCACAAAGTaGTACTTGAGGGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPSGVTK*YLRDRS
Trigger: GGACCTGTCCCTCAAGTATCACTTTGTGACTCCACT...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp CCAGTTGCCTGTTCCCTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCTTGGTCACCACCATTaGGGTCAGTGGAGTCACAAA +
Preference number: 4 (lower is better)
Translates to: PVACSLEQRLMKACRGWQLGHHH*GQWSHK
Trigger: TTTGTGACTCCACTGACCTCAATGGTGGTGACCAAG...CTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAGGGAACAGGCAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTCCTGTGACTGCATCCTaGATAAGGCGCAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: AHVPDAIKSGPSIPTGAGPVTAS*IRRSTV
Trigger: CACAGTGCTGCGCCTTATTCAGGATGCAGTCACAGG...ACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp CTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTACTGTAGACCTCGATaGCATTGGCCACCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: LCQWRGPRSCLPASHPLFYCRPR*HWPPLP
Trigger: CGGAAGGGGTGGCCAATGGCATCGAGGTCTACAGTA...AAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp CTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGACTCCTTGGCCGTGTCTaGACGGTTGACGGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LCAHVPDAIKSGPSIPTGLLGRV*TVDGSH
Trigger: ATGAGAGCCGTCAACCGTGCAGACACGGCCAAGGAG...TCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp TCTCTCAGCTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCTCGTACTTGCCCTTGTaGCTCTTCAGCAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SLSCVSGEAQEVAFLLAISYLPL*LFSSSS
Trigger: CGAGGAGCTGCTGAAGAGGCACAAGGGCAAGTACGA...GATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAGCTGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GTCTCTCAGCTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATTCGTACTTGCCCTTGTaGCTCTTCAGCAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: VSQLCQWRGPRSCLPASHSYLPL*LFSSSS
Trigger: CGAGGAGCTGCTGAAGAGGCACAAGGGCAAGTACGA...ATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAGCTGAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTCTCTCTGGGATTCTGTaGTCCTCTCGGGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: AHVPDAIKSGPSIPTGAGLSGIL*SSRALF
Trigger: GAACAAGGCCCGAGAGGAGCACAGAATCCCAGAGAG...ACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGCTCTCTGGGATTCTGTaGTCCTCTCGGGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VSGEAQEVAFLLAIPSFELSGIL*SSRALF
Trigger: GAACAAGGCCCGAGAGGAGCACAGAATCCCAGAGAG...CTCAAAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCCAACCTTCGTGCCGATaGTGGCATCCTTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPQPSCR*WHPFCS
Trigger: ACTACAGAAAGGATGCCAGCATCGGCACGAAGGTTG...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTACAGGCCCCTCTCTGTaGCCATGTTCCAGATGCCAT +
Preference number: 4 (lower is better)
Translates to: AHVPDAIKSGPSIPTGAGTGPSL*PCSRCH
Trigger: ATGGCATCTGGAACATGGGCACAGAGAGGGGCCTGT...ACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATGCTGGTTGTCGCCAGTGATCTaGCCATTAACTGTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ALLRCCGRTSRQPSCRCWLSPVI*PLTVRP
Trigger: AGGCCTCACAGTTAATGGGCAGATCACTGGCGACAA...CCAGCATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CCA 90 bp GTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTGGGTCCCAGTTGCCACCAGTTGCTTAGGCTaGACCTTGAGGTACATCTCG +
Preference number: 4 (lower is better)
Translates to: VAFLLAIPSFELLWVPVATSCLG*TLRYIS
Trigger: CGAGATGTACCTCAAGGTCCAGCCTAAGCAACTGGT...GGCAACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAAGGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCGGCTTGAAGGACACATaGCCCTTTTTCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPGLKDT*PFFPEK
Trigger: CTTCTCAGGGAAAAAGGGCCATGTGTCCTTCAAGCC...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACGGCTTGAAGGACACATaGCCCTTTTTCCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LEQRLMKACRGWQLSGLDGLKDT*PFFPEK
Trigger: CTTCTCAGGGAAAAAGGGCCATGTGTCCTTCAAGCC...GTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp TCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTACGGAGGTTCTCGGGCGTaGCCTGGACTAAGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SRCHKIRAIHPNRSWCVYGGSRA*PGLSAL
Trigger: AAGAGCACTTAGTCCAGGCCACGCCCGAGAACCTCC...GTAGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GAAAGTCACGGTGGACAGGATGTTTCTTCCACACCTGGTGTAGGACGACCACGAGGAGGTTCTCGGGCGTaGCCTGGACTAAGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: ESHGGQDVSSTPGVGRPRGGSRA*PGLSAL
Trigger: AAGAGCACTTAGTCCAGGCCACGCCCGAGAACCTCC...TCGTGGTCGTCCTACACCAGGTGTGGAAGAAACATCCTGTCCACCGTGACTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CCA 90 bp ATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTAACGTCCTGGCCTCCTaGAGGTTCTCGGGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: MKACRGWQLSGLDLGLYFNVLAS*RFSGVA
Trigger: GGCCACGCCCGAGAACCTCCAGGAGGCCAGGACGTT...AAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTTCTTCACAAACGTCCTaGCCTCCTGGAGGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: AHVPDAIKSGPSIPTGAGSSQTS*PPGGSR
Trigger: CCGAGAACCTCCAGGAGGCCAGGACGTTTGTGAAGA...ACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CAGGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCGGAACTTGCCCCCGATaGCATTCCGCACATTCTCTT +
Preference number: 4 (lower is better)
Translates to: QAPLCAHVPDAIKSGPSIGTCPR*HSAHSL
Trigger: AAGAGAATGTGCGGAATGCCATCGGGGGCAAGTTCC...GATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GCCTGTTCCCTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCTGTCTTGTTTCTTCCACACCTaGTGTAGGACGACCACGAAG +
Preference number: 4 (lower is better)
Translates to: ACSLEQRLMKACRGWQLSCFFHT*CRTTTK
Trigger: CTTCGTGGTCGTCCTACACCAGGTGTGGAAGAAACA...AGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAGGGAACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CAGGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCTTCTCCGTTGTTGTaGACGAACCAGCAGACAACC +
Preference number: 4 (lower is better)
Translates to: QAPLCAHVPDAIKSGPSIPSPLL*TNQQTT
Trigger: GGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGG...GATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTCAGGCTTGTCGGCAATaGCCCTCTCATCCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: AHVPDAIKSGPSIPTGAGQACRQ*PSHPRC
Trigger: ACAACGAGGATGAGAGGGCCATTGCCGACAAGCCTG...ACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAAGTCTTTCTGGTCTTaGAGTCAGGGCTGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPKSFWS*SQGCLS
Trigger: AGAGAGGCAGCCCTGACTCCAAGACCAGAAAGACTT...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCATCTTTTGAGCTGCTGTaGGTCCCAGTTGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: APLCAHVPDAIKSGPSIPSFELL*VPVACS
Trigger: GGAACAGGCAACTGGGACCCACAGCAGCTCAAAAGA...TGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp CTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAAGAGCAGAGCCAAGATaGGACAGGGCCACCATGCAA +
Preference number: 4 (lower is better)
Translates to: LCAHVPDAIKSGPSIPTGRAEPR*DRATMQ
Trigger: TTGCATGGTGGCCCTGTCTCATCTTGGCTCTGCTCT...TCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp CCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAAGAGCAGAGCCAAGATaGGACAGGGCCACCATGCAA +
Preference number: 4 (lower is better)
Translates to: PLCAHVPDAIKSGPSIPTRAEPR*DRATMQ
Trigger: TTGCATGGTGGCCCTGTCTCATCTTGGCTCTGCTCT...TGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp CATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGAGGTTAGCTCGAAGGTaGCTTTGCTGCCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: HVPDAIKSGPSIPTGAGVRLARR*LCCLQP
Trigger: TGGCTGCAGGCAGCAAAGTCACCTTCGAGCTAACCT...CACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp CATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGCAGCATCCAGCATGCTaGTTCCCTGAGGCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: HVPDAIKSGPSIPTGAGVQHPAC*FPEARR
Trigger: TCTTCGAGCCTCAGGGAATCAGCATGCTGGATGCTG...CACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp TCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTACATGGCCCTTTTTCCCTaGGAAGGACTTGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: SRCHKIRAIHPNRSWCVYMALFP*EGLGEG
Trigger: GCCCTCACCAAGTCCTTCTCAGGGAAAAAGGGCCAT...GTAGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGGTCTAAGCTGGGCTTaGAGGACACATGGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: AHVPDAIKSGPSIPTGAGGLSWA*RTHGPF
Trigger: AAAAGGGCCATGTGTCCTTCAAGCCCAGCTTAGACC...ACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp TGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCCCCTGTTCCACAGGGTaGTCTTCTCCGTTGTCACCT +
Preference number: 4 (lower is better)
Translates to: CSRCHKIRAIHPNRSWCVPCSTG*SSPLSP
Trigger: AGGTGACAACGGAGAAGATCACCCTGTGGAACAGGG...GACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTCCCTGTTCCACAGGGTaGTCTTCTCCGTTGTCACCT +
Preference number: 4 (lower is better)
Translates to: VPDAIKSGPSIPTGAGVSPCSTG*SSPLSP
Trigger: AGGTGACAACGGAGAAGATCACCCTGTGGAACAGGG...AGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GCCTGTTCCCTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCTGTCTCTGGTGACAATCAGCTaGTGGTTCTTCACCACCAAT +
Preference number: 4 (lower is better)
Translates to: ACSLEQRLMKACRGWQLSLVTIS*WFFTTN
Trigger: ATTGGTGGTGAAGAACCATCAGCTGATTGTCACCAG...AGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAGGGAACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GAAAGTGCTCGGCACGGCCCTGTTCCACAGGGTGATCTTCTCCGTTGTCACCTCCTGGTGACAATCAGCTaGTGGTTCTTCACCACCAAT +
Preference number: 4 (lower is better)
Translates to: ESARHGPVPQGDLLRCHLLVTIS*WFFTTN
Trigger: ATTGGTGGTGAAGAACCATCAGCTGATTGTCACCAG...GAGGTGACAACGGAGAAGATCACCCTGTGGAACAGGGCCGTGCCGAGCACTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR TCA 90 bp CATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTGGGAGCCCCTGGTaGCAATCAGCTGATGGTTCT +
Preference number: 4 (lower is better)
Translates to: HVPDAIKSGPSIPTGAGVSGSPW*QSADGS
Trigger: AGAACCATCAGCTGATTGTCACCAGGGGCTCCCAGA...CACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp TGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTTCTGGGAGCCCCTGGTaGCAATCAGCTGATGGTTCT +
Preference number: 4 (lower is better)
Translates to: CVSGEAQEVAFLLAIPSFSGSPW*QSADGS
Trigger: AGAACCATCAGCTGATTGTCACCAGGGGCTCCCAGA...AAAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp AGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTCCCATGTCCACCTCCTCTGTaGAGGTCAGGTCGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RHVEAGSCLVSTLDFIFPCPPPL*RSGRWW
Trigger: CCACCAACGACCTGACCTTCACAGAGGAGGTGGACA...TGGGAAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp AGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATGCTGAGTGGAGTCACAAAGTaGTACTTGAGGGACAGGTCC +
Preference number: 4 (lower is better)
Translates to: SPSPLLWTNQQTTFVPMLSGVTK*YLRDRS
Trigger: GGACCTGTCCCTCAAGTATCACTTTGTGACTCCACT...CAGCATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR TCA 90 bp GTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTCCTGTGACTGCATCCTaGATAAGGCGCAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: VPDAIKSGPSIPTGAGVSPVTAS*IRRSTV
Trigger: CACAGTGCTGCGCCTTATTCAGGATGCAGTCACAGG...AGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp CCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACATACTGTAGACCTCGATaGCATTGGCCACCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: PLCAHVPDAIKSGPSIPTYCRPR*HWPPLP
Trigger: CGGAAGGGGTGGCCAATGGCATCGAGGTCTACAGTA...TGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp CAGGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCGGTACATCTCGTACTTaGCCTTGTGCCTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: QAPLCAHVPDAIKSGPSIGTSRT*PCASSA
Trigger: TGCTGAAGAGGCACAAGGGCAAGTACGAGATGTACC...GATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAGGTACATCTCGTACTTaGCCTTGTGCCTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: APLCAHVPDAIKSGPSIPGTSRT*PCASSA
Trigger: TGCTGAAGAGGCACAAGGGCAAGTACGAGATGTACC...TGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp CTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACAAGTGTTTGACCAGTTaGTTAGGCTGGACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LEQRLMKACRGWQLSGLDKCLTS*LGWTLR
Trigger: CCTCAAGGTCCAGCCTAAGCAACTGGTCAAACACTT...GTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGAGGGCCTCCTTTGTCTaGTCTAATTTCCGACCAGCC +
Preference number: 4 (lower is better)
Translates to: VSGEAQEVAFLLAIPSFERASFV*SNFRPA
Trigger: GGCTGGTCGGAAATTAGAGCAGACAAAGGAGGCCCT...CTCAAAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp ACCTGGTGTAGGACGACCACGAAGGTAACCCCATCTCCAAAGGAGACCACCATGAGGGCCTCCTTTGTCTaGTCTAATTTCCGACCAGCC +
Preference number: 4 (lower is better)
Translates to: TWCRTTTKVTPSPKETTMRASFV*SNFRPA
Trigger: GGCTGGTCGGAAATTAGAGCAGACAAAGGAGGCCCT...CATGGTGGTCTCCTTTGGAGATGGGGTTACCTTCGTGGTCGTCCTACACCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR GCA 90 bp CAGGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCGTGGCCTGGACTAAGTaGTCTTTCCATGTGGACACA +
Preference number: 4 (lower is better)
Translates to: QAPLCAHVPDAIKSGPSIVAWTK*SFHVDT
Trigger: TGTGTCCACATGGAAAGAGCACTTAGTCCAGGCCAC...GATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp CCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACACTCTCTGGGATTCTGTaGTCCTCTCGGGCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: PLCAHVPDAIKSGPSIPTLSGIL*SSRALF
Trigger: GAACAAGGCCCGAGAGGAGCACAGAATCCCAGAGAG...TGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGTATACAAGGGGAACTTaGCCCCGATGGCATTCCGCA +
Preference number: 4 (lower is better)
Translates to: VSGEAQEVAFLLAIPSFEYTRGT*PRWHSA
Trigger: TGCGGAATGCCATCGGGGGCAAGTTCCCCTTGTATA...CTCAAAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCACAACCTTCGTGCCGATaGTGGCATCCTTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: APLCAHVPDAIKSGPSIPQPSCR*WHPFCS
Trigger: ACTACAGAAAGGATGCCAGCATCGGCACGAAGGTTG...TGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTAGCAGACAACCTTCGTaGCGATGCTGGCATCCTTTC +
Preference number: 4 (lower is better)
Translates to: AHVPDAIKSGPSIPTGAGSRQPS*RCWHPF
Trigger: GAAAGGATGCCAGCATCGGCACGAAGGTTGTCTGCT...ACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp TCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTACACAGGCCCCTCTCTGTaGCCATGTTCCAGATGCCAT +
Preference number: 4 (lower is better)
Translates to: SRCHKIRAIHPNRSWCVYTGPSL*PCSRCH
Trigger: ATGGCATCTGGAACATGGGCACAGAGAGGGGCCTGT...GTAGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp TGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTCCCCTCTTTTGAGCTaGTGTGGGTCCCAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: CSRCHKIRAIHPNRSWCVSPLLS*CGSQLP
Trigger: AGGCAACTGGGACCCACAGCAGCTCAAAAGAGGGGA...GACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp CCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTAGAGGCCCAAGAAGTTaGCTTCCTGCTAGCCATCCC +
Preference number: 4 (lower is better)
Translates to: PCSRCHKIRAIHPNRSWCRGPRS*LPASHP
Trigger: GGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCT...ACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CAGGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCACCAGTTGCTTAGGCTaGACCTTGAGGTACATCTCG +
Preference number: 4 (lower is better)
Translates to: QAPLCAHVPDAIKSGPSITSCLG*TLRYIS
Trigger: CGAGATGTACCTCAAGGTCCAGCCTAAGCAACTGGT...GATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp TTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTGGGTCCCAGTTGCCTGTTCCACCAGTTGCTTAGGCTaGACCTTGAGGTACATCTCG +
Preference number: 4 (lower is better)
Translates to: FLLAIPSFELLWVPVACSTSCLG*TLRYIS
Trigger: CGAGATGTACCTCAAGGTCCAGCCTAAGCAACTGGT...GGAACAGGCAACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAGTTCTTAGGCACCACTaGAAGGCCTTGAGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: APLCAHVPDAIKSGPSIPVLRHH*KALRCK
Trigger: TTTGCACCTCAAGGCCTTCCAGTGGTGCCTAAGAAC...TGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGATCTTCACAAACGTCCTaGCCTCCTGGAGGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: LCAHVPDAIKSGPSIPTGSSQTS*PPGGSR
Trigger: CCGAGAACCTCCAGGAGGCCAGGACGTTTGTGAAGA...TCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp AAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTCCCGGAGGTGCTCCTCTCTaGGATTCTGTGCTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: KACRGWQLSGLDLGLYFPGGAPL*DSVLLS
Trigger: CGAGAGGAGCACAGAATCCCAGAGAGGAGCACCTCC...GGGAAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CAGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATGCTTGCTCTCACCAACATTaGCATCCCCATCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: QPFSVVVDEPADNLRADACSHQH*HPHQSA
Trigger: TGCTGACTGATGGGGATGCCAATGTTGGTGAGAGCA...AGCATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CCA 90 bp CTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGATCGTTGGTGGCCCCATaGCCCTTCACATCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: LCAHVPDAIKSGPSIPTGSLVAP*PFTSAL
Trigger: TAAGGCAGATGTGAAGGGCCATGGGGCCACCAACGA...TCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CATGGACAGCCCATCCTGCGTGACTGTGACTGTGTCCAGCCAGCTGAAAGTGCTCCTTCGTGCCGATGCTaGCATCCTTTCTGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: HGQPILRDCDCVQPAESAPSCRC*HPFCSL
Trigger: AAGACTACAGAAAGGATGCCAGCATCGGCACGAAGG...AGCACTTTCAGCTGGCTGGACACAGTCACAGTCACGCAGGATGGGCTGTCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CCA 90 bp GTCTCTCAGCTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCTTCTCCGTTGTTGTaGACGAACCAGCAGACAACC +
Preference number: 4 (lower is better)
Translates to: VSQLCQWRGPRSCLPASHPSPLL*TNQQTT
Trigger: GGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGG...ATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAGCTGAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp ATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTACTCAAAACAGGTTGGGCCTTCTCCGTTGTTGTaGACGAACCAGCAGACAACC +
Preference number: 4 (lower is better)
Translates to: IRAIHPNRSWCVYSKQVGPSPLL*TNQQTT
Trigger: GGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGG...CCCAACCTGTTTTGAGTAGACACACCAGCTCCTGTTGGGATGGATGGCCCGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CCA 90 bp AAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTCCCTCCTTCTCCTCGCCATaGGCGTTCTTGCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KACRGWQLSGLDLGLYFPSFSSP*AFLRFS
Trigger: GGAGAAGCGCAAGAACGCCCATGGCGAGGAGAAGGA...GGGAAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp AACTGTGAGGCCTGTGACTGCATCCTGAATAAGGCGCAGCACTGTGCCTGGGGCAGTCCATCTGAGCATTaGCGATGCCCAGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: NCEACDCILNKAQHCAWGSPSEH*RCPVFQ
Trigger: TTGGAAAACTGGGCATCGCCAATGCTCAGATGGACT...GCCCCAGGCACAGTGCTGCGCCTTATTCAGGATGCAGTCACAGGCCTCACAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CCA 90 bp CTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTAGGCTGGCAGCTGTCTaGTCTCGACCTTGGACTTTA +
Preference number: 4 (lower is better)
Translates to: LCQWRGPRSCLPASHPLFRLAAV*SRPWTL
Trigger: TAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCT...AAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAAAGGCATGTAGAGGCTaGCAGCTGTCTGGTCTCGAC +
Preference number: 4 (lower is better)
Translates to: LCAHVPDAIKSGPSIPTGKACRG*QLSGLD
Trigger: GTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTT...TCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
3UTR CAA 72 bp TCAGTGTGGACACCATCAATCAGCCCTTCTCCGTTGTaGTGGACGAACCAGCAGACAACCTTCGTGCCGATG +
Preference number: 4 (lower is better)
Translates to: SVWTPSISPSPL*WTNQQTTFVPM
Trigger: CATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCTGATTGATGGTGTCCACACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR TCA 90 bp CTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGGTCTAAGCTGGGCTTaGAGGACACATGGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: LCAHVPDAIKSGPSIPTGGLSWA*RTHGPF
Trigger: AAAAGGGCCATGTGTCCTTCAAGCCCAGCTTAGACC...TCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp TGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCGCACGAAGTAGCCATTaGCTATCTGCACGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: CSRCHKIRAIHPNRSWCVARSSH*LSARCQ
Trigger: CTGGCAACGTGCAGATAGTCAATGGCTACTTCGTGC...GACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCACTGGTGACAATCAGCTaGTGGTTCTTCACCACCAAT +
Preference number: 4 (lower is better)
Translates to: APLCAHVPDAIKSGPSIPLVTIS*WFFTTN
Trigger: ATTGGTGGTGAAGAACCATCAGCTGATTGTCACCAG...TGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp AGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTCCCATCACAAAGTGATACTTaGGGGACAGGTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: RHVEAGSCLVSTLDFIFPSQSDT*GTGPGP
Trigger: GGGCCCTGGACCTGTCCCTCAAGTATCACTTTGTGA...TGGGAAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GTCTCTCAGCTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCTTGGTCACCACCATTaGGGTCAGTGGAGTCACAAA +
Preference number: 4 (lower is better)
Translates to: VSQLCQWRGPRSCLPASHLGHHH*GQWSHK
Trigger: TTTGTGACTCCACTGACCTCAATGGTGGTGACCAAG...ATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAGCTGAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp CCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGGCTTCATCGATGTTaGAGCAGAGGGCATCGTCTT +
Preference number: 4 (lower is better)
Translates to: PLCAHVPDAIKSGPSIPTGLHRC*SRGHRL
Trigger: AAGACGATGCCCTCTGCTTCAACATCGATGAAGCCC...TGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp CCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGGGCTTCATCGATGTTaGAGCAGAGGGCATCGTCTT +
Preference number: 4 (lower is better)
Translates to: PCSRCHKIRAIHPNRSWCGLHRC*SRGHRL
Trigger: AAGACGATGCCCTCTGCTTCAACATCGATGAAGCCC...ACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp AGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTCCCAACCTGGAAGTCCATCTaGGCATTGGCGATGCCCAGT +
Preference number: 4 (lower is better)
Translates to: RHVEAGSCLVSTLDFIFPTWKSI*ALAMPS
Trigger: ACTGGGCATCGCCAATGCTCAGATGGACTTCCAGGT...TGGGAAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp TGTAGGACGACCACGAAGGTAACCCCATCTCCAAAGGAGACCACCATGTTCTTCACCTGGAAGTCCATCTaGGCATTGGCGATGCCCAGT +
Preference number: 4 (lower is better)
Translates to: CRTTTKVTPSPKETTMFFTWKSI*ALAMPS
Trigger: ACTGGGCATCGCCAATGCTCAGATGGACTTCCAGGT...GAAGAACATGGTGGTCTCCTTTGGAGATGGGGTTACCTTCGTGGTCGTCCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR GCA 90 bp CAGGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCAAGTGTTTGACCAGTTaGTTAGGCTGGACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: QAPLCAHVPDAIKSGPSIKCLTS*LGWTLR
Trigger: CCTCAAGGTCCAGCCTAAGCAACTGGTCAAACACTT...GATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp TCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTACAGGGCCTCCTTTGTCTaGTCTAATTTCCGACCAGCC +
Preference number: 4 (lower is better)
Translates to: SRCHKIRAIHPNRSWCVYRASFV*SNFRPA
Trigger: GGCTGGTCGGAAATTAGAGCAGACAAAGGAGGCCCT...GTAGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCTTCCTTTATCCTCCATaGTCTTCACAAACGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPFLYPP*SSQTSW
Trigger: CCAGGACGTTTGTGAAGAGCATGGAGGATAAAGGAA...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp TGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTATACAAGGGGAACTTaGCCCCGATGGCATTCCGCA +
Preference number: 4 (lower is better)
Translates to: CSRCHKIRAIHPNRSWCVYTRGT*PRWHSA
Trigger: TGCGGAATGCCATCGGGGGCAAGTTCCCCTTGTATA...GACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp TCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTACTATACAAGGGGAACTTaGCCCCGATGGCATTCCGCA +
Preference number: 4 (lower is better)
Translates to: SRCHKIRAIHPNRSWCVYYTRGT*PRWHSA
Trigger: TGCGGAATGCCATCGGGGGCAAGTTCCCCTTGTATA...GTAGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp CTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGACAGAGTCCTCATAAATaGGCCGGGCAAACCCATGGT +
Preference number: 4 (lower is better)
Translates to: LCAHVPDAIKSGPSIPTGQSPHK*AGQTHG
Trigger: ACCATGGGTTTGCCCGGCGCATTTATGAGGACTCTG...TCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp GTCTCTCAGCTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCAACCTTCGTGCCGATaGTGGCATCCTTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: VSQLCQWRGPRSCLPASHQPSCR*WHPFCS
Trigger: ACTACAGAAAGGATGCCAGCATCGGCACGAAGGTTG...ATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAGCTGAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp TGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCAGCAGACAACCTTCGTaGCGATGCTGGCATCCTTTC +
Preference number: 4 (lower is better)
Translates to: CSRCHKIRAIHPNRSWCVSRQPS*RCWHPF
Trigger: GAAAGGATGCCAGCATCGGCACGAAGGTTGTCTGCT...GACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp TGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTTGTGAGGCCTGTGACTaGATCCTGAATAAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: CVSGEAQEVAFLLAIPSFCEACD*ILNKAQ
Trigger: CTGCGCCTTATTCAGGATGCAGTCACAGGCCTCACA...AAAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp AACTGTGAGGCCTGTGACTGCATCCTGAATAAGGCGCAGCACTGTGCCTGGGGCTCTGAGCATTGGCGATaGCCAGTTTTCCAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: NCEACDCILNKAQHCAWGSEHWR*PVFQSK
Trigger: CTTACTTTGGAAAACTGGGCATCGCCAATGCTCAGA...GCCCCAGGCACAGTGCTGCGCCTTATTCAGGATGCAGTCACAGGCCTCACAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CCA 90 bp TGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCGGGCATGAACGCTGTTaGTCTAAGCTGGGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: CSRCHKIRAIHPNRSWCVGHERC*SKLGLK
Trigger: CTTCAAGCCCAGCTTAGACCAACAGCGTTCATGCCC...GACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGGGCATGAACGCTGTTaGTCTAAGCTGGGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: LCAHVPDAIKSGPSIPTGGHERC*SKLGLK
Trigger: CTTCAAGCCCAGCTTAGACCAACAGCGTTCATGCCC...TCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGATTCTCGGGCGTGGCCTaGACTAAGTGCTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LCAHVPDAIKSGPSIPTGFSGVA*TKCSFH
Trigger: ATGGAAAGAGCACTTAGTCCAGGCCACGCCCGAGAA...TCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp TCTCTCAGCTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCTGCTCTCACCAACATTaGCATCCCCATCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SLSCVSGEAQEVAFLLAICSHQH*HPHQSA
Trigger: TGCTGACTGATGGGGATGCCAATGTTGGTGAGAGCA...GATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAGCTGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp TGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCGGAACTTGCCCCCGATaGCATTCCGCACATTCTCTT +
Preference number: 4 (lower is better)
Translates to: CSRCHKIRAIHPNRSWCVGTCPR*HSAHSL
Trigger: AAGAGAATGTGCGGAATGCCATCGGGGGCAAGTTCC...GACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp ATCAGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATGTGTTTCTTCCACACCTaGTGTAGGACGACCACGAAG +
Preference number: 4 (lower is better)
Translates to: ISPSPLLWTNQQTTFVPMCFFHT*CRTTTK
Trigger: CTTCGTGGTCGTCCTACACCAGGTGTGGAAGAAACA...CATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CCA 90 bp CCAGTTGCCTGTTCCCTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGTTAAAGTCAAAGGGTTaGAAGAATTGCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PVACSLEQRLMKACRGWQLKSKG*KNCPSS
Trigger: GCTGCTGGGGCAATTCTTCCAACCCTTTGACTTTAA...CTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAGGGAACAGGCAACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCACATCCCAACAGGAGCTaGTGTGTCTACTCAAAACAG +
Preference number: 4 (lower is better)
Translates to: APLCAHVPDAIKSGPSIPHPNRS*CVYSKQ
Trigger: CTGTTTTGAGTAGACACACCAGCTCCTGTTGGGATG...TGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CAGGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCATCCCAACAGGAGCTaGTGTGTCTACTCAAAACAG +
Preference number: 4 (lower is better)
Translates to: QAPLCAHVPDAIKSGPSIHPNRS*CVYSKQ
Trigger: CTGTTTTGAGTAGACACACCAGCTCCTGTTGGGATG...GATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp TCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTACCGTTGTCCTCAGGCTTaGTCACCACCATTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SRCHKIRAIHPNRSWCVYRCPQA*SPPLRS
Trigger: TGACCTCAATGGTGGTGACCAAGCCTGAGGACAACG...GTAGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTCTGGTCTCGACCTTaGACTTTATTTTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: AHVPDAIKSGPSIPTGAGVWSRP*TLFSQP
Trigger: GGGCTGGGAAAATAAAGTCCAAGGTCGAGACCAGAC...ACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GTTGATCATCATGGACAGCCCATCCTGCGTGACTGTGACTGTGTCCAGCCAGCTGTCTGGTCTCGACCTTaGACTTTATTTTCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VDHHGQPILRDCDCVQPAVWSRP*TLFSQP
Trigger: GGGCTGGGAAAATAAAGTCCAAGGTCGAGACCAGAC...AGCTGGCTGGACACAGTCACAGTCACGCAGGATGGGCTGTCCATGATGATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
3UTR CAA 72 bp ACCCCATCTCCAAAGGAGACCACCATGTTCTTCCTGTaGATCATCATGGACAGCCCATCCTGCGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: TPSPKETTMFFL*IIMDSPSCVTV
Trigger: CACAGTCACGCAGGATGGGCTGTCCATGATGATCAACAGGAAGAACATGGTGGTCTCCTTTGGAGATGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR TCA 90 bp TGTAGGACGACCACGAAGGTAACCCCATCTCCAAAGGAGACCACCATGTTCTTCGGTCTAAGCTGGGCTTaGAGGACACATGGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: CRTTTKVTPSPKETTMFFGLSWA*RTHGPF
Trigger: AAAAGGGCCATGTGTCCTTCAAGCCCAGCTTAGACC...GAAGAACATGGTGGTCTCCTTTGGAGATGGGGTTACCTTCGTGGTCGTCCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR TCA 90 bp AAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTCCCGCACGAAGTAGCCATTaGCTATCTGCACGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: KACRGWQLSGLDLGLYFPARSSH*LSARCQ
Trigger: CTGGCAACGTGCAGATAGTCAATGGCTACTTCGTGC...GGGAAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp AGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATGCTGTCAGCAGCCCGTCATTaGTGTTGGTCATTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: SPSPLLWTNQQTTFVPMLSAARH*CWSFLY
Trigger: ATAAAGGAATGACCAACATCAATGACGGGCTGCTGA...CAGCATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR TCA 90 bp CACCTGGAAGTCCATCTGAGCATTGGCGATGCCCAGTTTTCCAAAGTAAGTCTTTGGAGCAGAGGCTCATaGAGGCATGTAGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: HLEVHLSIGDAQFSKVSLWSRGS*RHVEAG
Trigger: GCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCA...AAGACTTACTTTGGAAAACTGGGCATCGCCAATGCTCAGATGGACTTCCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR GCA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCACAGCCTTTTCATACTaGTTCTTGGCAACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPTAFSY*FLATSF
Trigger: GAAGGAAGTTGCCAAGAAGCAGTATGAAAAGGCTGT...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp ATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTGGTGACTTTGCTGCCTaGAGCCACGTTGACCGAGAC +
Preference number: 4 (lower is better)
Translates to: MKACRGWQLSGLDLGLYFGDFAA*SHVDRD
Trigger: GTCTCGGTCAACGTGGCTGCAGGCAGCAAAGTCACC...AAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp TCTCTCAGCTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCAAGTGTTTGACCAGTTaGTTAGGCTGGACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: SLSCVSGEAQEVAFLLAIKCLTS*LGWTLR
Trigger: CCTCAAGGTCCAGCCTAAGCAACTGGTCAAACACTT...GATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAGCTGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp CTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTGGAAGGCCTTGAGGTaGAAAGAAGTGCACGAAGTA +
Preference number: 4 (lower is better)
Translates to: LCQWRGPRSCLPASHPLFWKALR*KEVHEV
Trigger: TACTTCGTGCACTTCTTTGCACCTCAAGGCCTTCCA...AAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp CAATCAGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATGGAAGGCCTTGAGGTaGAAAGAAGTGCACGAAGTA +
Preference number: 4 (lower is better)
Translates to: QSALLRCCGRTSRQPSCRWKALR*KEVHEV
Trigger: TACTTCGTGCACTTCTTTGCACCTCAAGGCCTTCCA...TCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCTGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR GCA 90 bp CATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGGTGGCCTGGACTAAGTaGTCTTTCCATGTGGACACA +
Preference number: 4 (lower is better)
Translates to: HVPDAIKSGPSIPTGAGVVAWTK*SFHVDT
Trigger: TGTGTCCACATGGAAAGAGCACTTAGTCCAGGCCAC...CACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp AAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTCCCCAGAGTCCTCATAAATaGGCCGGGCAAACCCATGGT +
Preference number: 4 (lower is better)
Translates to: KACRGWQLSGLDLGLYFPQSPHK*AGQTHG
Trigger: ACCATGGGTTTGCCCGGCGCATTTATGAGGACTCTG...GGGAAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp AAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTCCCAGCAGACAACCTTCGTaGCGATGCTGGCATCCTTTC +
Preference number: 4 (lower is better)
Translates to: KACRGWQLSGLDLGLYFPSRQPS*RCWHPF
Trigger: GAAAGGATGCCAGCATCGGCACGAAGGTTGTCTGCT...GGGAAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp CCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACATTGTCGCCAGTGATCTaGCCATTAACTGTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PLCAHVPDAIKSGPSIPTLSPVI*PLTVRP
Trigger: AGGCCTCACAGTTAATGGGCAGATCACTGGCGACAA...TGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp AAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTCCCGGGCATGAACGCTGTTaGTCTAAGCTGGGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: KACRGWQLSGLDLGLYFPGHERC*SKLGLK
Trigger: CTTCAAGCCCAGCTTAGACCAACAGCGTTCATGCCC...GGGAAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp TGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCGTTCTTAGGCACCACTaGAAGGCCTTGAGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: CSRCHKIRAIHPNRSWCVVLRHH*KALRCK
Trigger: TTTGCACCTCAAGGCCTTCCAGTGGTGCCTAAGAAC...GACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGTTCTTAGGCACCACTaGAAGGCCTTGAGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: PLCAHVPDAIKSGPSIPTVLRHH*KALRCK
Trigger: TTTGCACCTCAAGGCCTTCCAGTGGTGCCTAAGAAC...TGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACATGCTCTCACCAACATTaGCATCCCCATCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PLCAHVPDAIKSGPSIPTCSHQH*HPHQSA
Trigger: TGCTGACTGATGGGGATGCCAATGTTGGTGAGAGCA...TGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGATGTTTCTTCCACACCTaGTGTAGGACGACCACGAAG +
Preference number: 4 (lower is better)
Translates to: LCAHVPDAIKSGPSIPTGCFFHT*CRTTTK
Trigger: CTTCGTGGTCGTCCTACACCAGGTGTGGAAGAAACA...TCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCATTAAAGTCAAAGGGTTaGAAGAATTGCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: APLCAHVPDAIKSGPSIPLKSKG*KNCPSS
Trigger: GCTGCTGGGGCAATTCTTCCAACCCTTTGACTTTAA...TGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp TGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCCCTTCGTGCCGATGCTaGCATCCTTTCTGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: CSRCHKIRAIHPNRSWCVPSCRC*HPFCSL
Trigger: AAGACTACAGAAAGGATGCCAGCATCGGCACGAAGG...GACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGACCTTCGTGCCGATGCTaGCATCCTTTCTGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: LCAHVPDAIKSGPSIPTGPSCRC*HPFCSL
Trigger: AAGACTACAGAAAGGATGCCAGCATCGGCACGAAGG...TCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp ACCTGGTGTAGGACGACCACGAAGGTAACCCCATCTCCAAAGGAGACCACCATGCATCCCAACAGGAGCTaGTGTGTCTACTCAAAACAG +
Preference number: 4 (lower is better)
Translates to: TWCRTTTKVTPSPKETTMHPNRS*CVYSKQ
Trigger: CTGTTTTGAGTAGACACACCAGCTCCTGTTGGGATG...CATGGTGGTCTCCTTTGGAGATGGGGTTACCTTCGTGGTCGTCCTACACCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CCA 90 bp TGTAGGACGACCACGAAGGTAACCCCATCTCCAAAGGAGACCACCATGTTCTTCCGTTGTCCTCAGGCTTaGTCACCACCATTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: CRTTTKVTPSPKETTMFFRCPQA*SPPLRS
Trigger: TGACCTCAATGGTGGTGACCAAGCCTGAGGACAACG...GAAGAACATGGTGGTCTCCTTTGGAGATGGGGTTACCTTCGTGGTCGTCCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CCA 90 bp CCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTAAGTCTTTCTGGTCTTaGAGTCAGGGCTGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PCSRCHKIRAIHPNRSWCKSFWS*SQGCLS
Trigger: AGAGAGGCAGCCCTGACTCCAAGACCAGAAAGACTT...ACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTCAAAGTAAGTCTTTCTaGTCTTGGAGTCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: AHVPDAIKSGPSIPTGAGQSKSF*SWSQGC
Trigger: GCAGCCCTGACTCCAAGACCAGAAAGACTTACTTTG...ACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp TGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTATCTTCCAGGATTCTaGGAAGGGCCTCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: CSRCHKIRAIHPNRSWCVYLPGF*EGPPLS
Trigger: AGACAAAGGAGGCCCTTCTCAGAATCCTGGAAGATA...GACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp CATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTATCTTCCAGGATTCTaGGAAGGGCCTCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: HVPDAIKSGPSIPTGAGVYLPGF*EGPPLS
Trigger: AGACAAAGGAGGCCCTTCTCAGAATCCTGGAAGATA...CACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTTCAGCAGCCCGTCATTaGTGTTGGTCATTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: AHVPDAIKSGPSIPTGAGSAARH*CWSFLY
Trigger: ATAAAGGAATGACCAACATCAATGACGGGCTGCTGA...ACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GTCTCTCAGCTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATTCAGCAGCCCGTCATTaGTGTTGGTCATTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: VSQLCQWRGPRSCLPASHSAARH*CWSFLY
Trigger: ATAAAGGAATGACCAACATCAATGACGGGCTGCTGA...ATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAGCTGAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp ATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTCCCTGTTCCACAGGGTaGTCTTCTCCGTTGTCACCT +
Preference number: 4 (lower is better)
Translates to: MKACRGWQLSGLDLGLYFPCSTG*SSPLSP
Trigger: AGGTGACAACGGAGAAGATCACCCTGTGGAACAGGG...AAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp TGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCCCATGTTCTTCCTGTTaGTCATCATGGACAGCCCAT +
Preference number: 4 (lower is better)
Translates to: CSRCHKIRAIHPNRSWCVPCSSC*SSWTAH
Trigger: ATGGGCTGTCCATGATGATCAACAGGAAGAACATGG...GACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp AATCAGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATCCATGTTCTTCCTGTTaGTCATCATGGACAGCCCAT +
Preference number: 4 (lower is better)
Translates to: NQPFSVVVDEPADNLRADPCSSC*SSWTAH
Trigger: ATGGGCTGTCCATGATGATCAACAGGAAGAACATGG...ATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR GCA 90 bp ATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTTACTGTAGACCTCGATaGCATTGGCCACCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: MKACRGWQLSGLDLGLYFYCRPR*HWPPLP
Trigger: CGGAAGGGGTGGCCAATGGCATCGAGGTCTACAGTA...AAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp TGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTGGAAGGCCTTGAGGTaGAAAGAAGTGCACGAAGTA +
Preference number: 4 (lower is better)
Translates to: CSRCHKIRAIHPNRSWCVWKALR*KEVHEV
Trigger: TACTTCGTGCACTTCTTTGCACCTCAAGGCCTTCCA...GACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp ATCAGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATGTTCCTTTATCCTCCATaGTCTTCACAAACGTCCTGG +
Preference number: 4 (lower is better)
Translates to: ISPSPLLWTNQQTTFVPMFLYPP*SSQTSW
Trigger: CCAGGACGTTTGTGAAGAGCATGGAGGATAAAGGAA...CATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR GCA 90 bp GAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTGGGTCCCAGTTTCTGAGCATTGGCGATaGCCAGTTTTCCAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: EVAFLLAIPSFELLWVPVSEHWR*PVFQSK
Trigger: CTTACTTTGGAAAACTGGGCATCGCCAATGCTCAGA...AACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAAGGCAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp ATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTTCGTTGGTGGCCCCATaGCCCTTCACATCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: MKACRGWQLSGLDLGLYFSLVAP*PFTSAL
Trigger: TAAGGCAGATGTGAAGGGCCATGGGGCCACCAACGA...AAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp GCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCACTACTCAAAACAGGTTaGGGACAATGTAGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: APLCAHVPDAIKSGPSIPLLKTG*GQCSQC
Trigger: ACACTGACTACATTGTCCCCAACCTGTTTTGAGTAG...TGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp CACCTGGAAGTCCATCTGAGCATTGGCGATGCCCAGTTTTCCAAAGTAAGTCTTCAGGCTTGTCGGCAATaGCCCTCTCATCCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: HLEVHLSIGDAQFSKVSLQACRQ*PSHPRC
Trigger: ACAACGAGGATGAGAGGGCCATTGCCGACAAGCCTG...AAGACTTACTTTGGAAAACTGGGCATCGCCAATGCTCAGATGGACTTCCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CCA 90 bp GCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTTCTTTCTCCGGAATTTaGATGATGAAGTGGGGATCC +
Preference number: 4 (lower is better)
Translates to: AHVPDAIKSGPSIPTGAGSFSGI*MMKWGS
Trigger: GGATCCCCACTTCATCATCCAAATTCCGGAGAAAGA...ACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp TCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTACCAAAGTAAGTCTTTCTaGTCTTGGAGTCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SRCHKIRAIHPNRSWCVYQSKSF*SWSQGC
Trigger: GCAGCCCTGACTCCAAGACCAGAAAGACTTACTTTG...GTAGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp TGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCAGTCCATCTGAGCATTaGCGATGCCCAGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: CSRCHKIRAIHPNRSWCVSPSEH*RCPVFQ
Trigger: TTGGAAAACTGGGCATCGCCAATGCTCAGATGGACT...GACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp CTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAAGGTCACCTTGGAGTTaGTTTTGGTACTGTAGACCT +
Preference number: 4 (lower is better)
Translates to: LCAHVPDAIKSGPSIPTGRSPWS*FWYCRP
Trigger: AGGTCTACAGTACCAAAATCAACTCCAAGGTGACCT...TCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTAGGTCACCTTGGAGTTaGTTTTGGTACTGTAGACCT +
Preference number: 4 (lower is better)
Translates to: VPDAIKSGPSIPTGAGVSRSPWS*FWYCRP
Trigger: AGGTCTACAGTACCAAAATCAACTCCAAGGTGACCT...AGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp AGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTCCCACCATGTTCTTCCTGTTaGTCATCATGGACAGCCCAT +
Preference number: 4 (lower is better)
Translates to: RHVEAGSCLVSTLDFIFPPCSSC*SSWTAH
Trigger: ATGGGCTGTCCATGATGATCAACAGGAAGAACATGG...TGGGAAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTGGGTCCCAGTTGCCAAGCTGTCATACATTTaGATCCCTAAAGTTCTAGTC +
Preference number: 4 (lower is better)
Translates to: VAFLLAIPSFELLWVPVAKLSYI*IPKVLV
Trigger: GACTAGAACTTTAGGGATTCAAATGTATGACAGCTT...GGCAACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAAGGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp CCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTTTCCTTTATCCTCCATaGTCTTCACAAACGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PCSRCHKIRAIHPNRSWCFLYPP*SSQTSW
Trigger: CCAGGACGTTTGTGAAGAGCATGGAGGATAAAGGAA...ACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp ATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTTTCTCGGGCGTGGCCTaGACTAAGTGCTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: MKACRGWQLSGLDLGLYFFSGVA*TKCSFH
Trigger: ATGGAAAGAGCACTTAGTCCAGGCCACGCCCGAGAA...AAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp TCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTACTTAAAGTCAAAGGGTTaGAAGAATTGCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SRCHKIRAIHPNRSWCVYLKSKG*KNCPSS
Trigger: GCTGCTGGGGCAATTCTTCCAACCCTTTGACTTTAA...GTAGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp TCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTACACAGCCTTTTCATACTaGTTCTTGGCAACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SRCHKIRAIHPNRSWCVYTAFSY*FLATSF
Trigger: GAAGGAAGTTGCCAAGAAGCAGTATGAAAAGGCTGT...GTAGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp CCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTACAGCCTTTTCATACTaGTTCTTGGCAACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PCSRCHKIRAIHPNRSWCTAFSY*FLATSF
Trigger: GAAGGAAGTTGCCAAGAAGCAGTATGAAAAGGCTGT...ACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp CACCTGGAAGTCCATCTGAGCATTGGCGATGCCCAGTTTTCCAAAGTAAGTCTTGTGGCCTGGACTAAGTaGTCTTTCCATGTGGACACA +
Preference number: 4 (lower is better)
Translates to: HLEVHLSIGDAQFSKVSLVAWTK*SFHVDT
Trigger: TGTGTCCACATGGAAAGAGCACTTAGTCCAGGCCAC...AAGACTTACTTTGGAAAACTGGGCATCGCCAATGCTCAGATGGACTTCCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR GCA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCTATAATTCAGATTGTTaGCAAAGCCCAGGTTATACA +
Preference number: 4 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPYNSDC*QSPGYT
Trigger: TGTATAACCTGGGCTTTGGCAACAATCTGAATTATA...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp TGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCCTACTCAAAACAGGTTaGGGACAATGTAGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: CSRCHKIRAIHPNRSWCVLLKTG*GQCSQC
Trigger: ACACTGACTACATTGTCCCCAACCTGTTTTGAGTAG...GACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR TCA 90 bp GTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTAAGCTGTCATACATTTaGATCCCTAAAGTTCTAGTC +
Preference number: 4 (lower is better)
Translates to: VPDAIKSGPSIPTGAGVSKLSYI*IPKVLV
Trigger: GACTAGAACTTTAGGGATTCAAATGTATGACAGCTT...AGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CCA 90 bp ATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTTCTTTCTCCGGAATTTaGATGATGAAGTGGGGATCC +
Preference number: 4 (lower is better)
Translates to: MKACRGWQLSGLDLGLYFSFSGI*MMKWGS
Trigger: GGATCCCCACTTCATCATCCAAATTCCGGAGAAAGA...AAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp CCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTTATAATTCAGATTGTTaGCAAAGCCCAGGTTATACA +
Preference number: 4 (lower is better)
Translates to: PCSRCHKIRAIHPNRSWCYNSDC*QSPGYT
Trigger: TGTATAACCTGGGCTTTGGCAACAATCTGAATTATA...ACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR GCA 90 bp CATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTATAATTCAGATTGTTaGCAAAGCCCAGGTTATACA +
Preference number: 4 (lower is better)
Translates to: HVPDAIKSGPSIPTGAGVYNSDC*QSPGYT
Trigger: TGTATAACCTGGGCTTTGGCAACAATCTGAATTATA...CACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS CCA 90 bp GGGGTCGTCACTCTGTGGTGCTCTTTCCCAGGAGTCCTGCGCTGTTaGAGGCTGCCAGGGCAGAGGGCCGTAAGCTGTTTGCCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: GVVTLWCSFPGVLRC*RLPGQRAVSCLPAV
Trigger: CACAGCTGGCAAACAGCTTACGGCCCTCTGCCCTGGCAGCCTCCAACAGCGCAGGACTCCTGGGAAAGAGCACCACAGAGTGACGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467268.1
CDS CCA 90 bp CCCTCTTGGGCTACATCCTGCGAGGTTGGAGGGGTCGTCACTCTGTaGTGCTCTTTCCCAGGAGTCCTGCGCTGTTGGAGGCTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: PSWATSCEVGGVVTL*CSFPGVLRCWRLPG
Trigger: CCCTGGCAGCCTCCAACAGCGCAGGACTCCTGGGAAAGAGCACCACAGAGTGACGACCCCTCCAACCTCGCAGGATGTAGCCCAAGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467268.1
CDS CCA 90 bp GTGGAGGGACATGTGGCAGGGGCAGGCTCTAAGCAGTGGGAGGAGTaGCAGCTGCCAGCATGTACTCACTCAGGTAGGACATGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: VEGHVAGAGSKQWEE*QLPACTHSGRTWRG
Trigger: GCCCCGCCATGTCCTACCTGAGTGAGTACATGCTGGCAGCTGCCACTCCTCCCACTGCTTAGAGCCTGCCCCTGCCACATGTCCCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493136.1
CDS GCA 90 bp TCTTGGGCTACATCCTGCGAGGTTGGAGGGGTCGTCACTCTGTGGTaGTCTTTCCCAGGAGTCCTGCGCTGTTGGAGGCTGCCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: SWATSCEVGGVVTLW*SFPGVLRCWRLPGQ
Trigger: CTGCCCTGGCAGCCTCCAACAGCGCAGGACTCCTGGGAAAGAGCACCACAGAGTGACGACCCCTCCAACCTCGCAGGATGTAGCCCAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467268.1
CDS GCA 90 bp GCGGAAGGAAGGGATGCCTGTGAGGGGCCCTCTTGGGCTACATCCTaGGAGGTTGGAGGGGTCGTCACTCTGTGGTGCTCTTTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: AEGRDACEGPSWATS*EVGGVVTLWCSFPG
Trigger: TCCTGGGAAAGAGCACCACAGAGTGACGACCCCTCCAACCTCGCAGGATGTAGCCCAAGAGGGCCCCTCACAGGCATCCCTTCCTTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467268.1
CDS CCA 90 bp ACACATGGCCCACGCTCCGGCCTTTCTGAGCACCGCTTTTCCCCTTaGAGATCAGGGCTCCTGGCTGGGCACAGGCCTTGGCTGATTCAG +
Preference number: 5 (lower is better)
Translates to: THGPRSGLSEHRFSP*RSGLLAGHRPWLIQ
Trigger: CTGAATCAGCCAAGGCCTGTGCCCAGCCAGGAGCCCTGATCTCCAAGGGGAAAAGCGGTGCTCAGAAAGGCCGGAGCGTGGGCCATGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465243.6
CDS CCA 90 bp TGGGAGGAGTGGCAGCTGCCAGCATGTACTCACTCAGGTAGGACATaGCGGGGCTCACCGGTGTGGCTGAAAAGCCGAAGGGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: WEEWQLPACTHSGRT*RGSPVWLKSRRAVV
Trigger: CACCACTGCCCTTCGGCTTTTCAGCCACACCGGTGAGCCCCGCCATGTCCTACCTGAGTGAGTACATGCTGGCAGCTGCCACTCCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493136.1
CDS TCA 90 bp GGACACATGGCCTGGAAGGCACTGTTTACCACGCTCCGGCCTTTCTaGGCACCGCTTTTCCCCTTGGAGATCAGGGCTCCTGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: GHMAWKALFTTLRPF*APLFPLEIRAPGWA
Trigger: TGCCCAGCCAGGAGCCCTGATCTCCAAGGGGAAAAGCGGTGCTCAGAAAGGCCGGAGCGTGGTAAACAGTGCCTTCCAGGCCATGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463893.1
CDS CCA 90 bp AAGGAAGTGTCTGCGGAAGGAAGGGATGCCTGTGAGGGGCCCTCTTaGGCTACATCCTGCGAGGTTGGAGGGGTCGTCACTCTGTGGTGC +
Preference number: 5 (lower is better)
Translates to: KEVSAEGRDACEGPS*ATSCEVGGVVTLWC
Trigger: GCACCACAGAGTGACGACCCCTCCAACCTCGCAGGATGTAGCCCAAGAGGGCCCCTCACAGGCATCCCTTCCTTCCGCAGACACTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467268.1
CDS CCA 90 bp CAGGATAGCGTTCTCGGGGTACTCCATCTCCACACCCGTCAGCAGTaGGTTGGCCACCTCCTCATAGAAGCCCTGAAGTTCGCACGGGGC +
Preference number: 5 (lower is better)
Translates to: QDSVLGVLHLHTRQQ*VGHLLIEALKFARG
Trigger: GCCCCGTGCGAACTTCAGGGCTTCTATGAGGAGGTGGCCAACCCACTGCTGACGGGTGTGGAGATGGAGTACCCCGAGAACGCTATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465314.5
CDS CCA 90 bp GTAGCCACGGTGGAGGGACATGTGGCAGGGGCAGGCTCTAAGCAGTaGGAGGAGTGGCAGCTGCCAGCATGTACTCACTCAGGTAGGACA +
Preference number: 5 (lower is better)
Translates to: VATVEGHVAGAGSKQ*EEWQLPACTHSGRT
Trigger: TGTCCTACCTGAGTGAGTACATGCTGGCAGCTGCCACTCCTCCCACTGCTTAGAGCCTGCCCCTGCCACATGTCCCTCCACCGTGGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493136.1
CDS CCA 90 bp AAATGCATTAGAAGCCATAGGGCACTTGTGAGCAGGGACCAGAGCTaGCTGCTTGGCCGACCAGCCCTAGGCTGTGGGCCTCCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: KCIRSHRALVSRDQS*LLGRPALGCGPPSS
Trigger: GCTGCTGGGAGGCCCACAGCCTAGGGCTGGTCGGCCAAGCAGCCAGCTCTGGTCCCTGCTCACAAGTGCCCTATGGCTTCTAATGCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495622.5
CDS CCA 90 bp GCTCACCGGTGTGGCTATCCCCACCTTCCCCAGGCTTGTCGGCAATaGCCCTCTCATCCTCGTTGTCCTCAGGCTTGGTCACCACCATTG +
Preference number: 5 (lower is better)
Translates to: AHRCGYPHLPQACRQ*PSHPRCPQAWSPPL
Trigger: CAATGGTGGTGACCAAGCCTGAGGACAACGAGGATGAGAGGGCCATTGCCGACAAGCCTGGGGAAGGTGGGGATAGCCACACCGGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CAA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCACCAAGCCGGCCGTCTaGCCCTGGGACACAGCCTTT +
Preference number: 5 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPTKPAV*PWDTAF
Trigger: AAAGGCTGTGTCCCAGGGCAAGACGGCCGGCTTGGT...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCGTGAAGGTCAGGTCGTaGGTGGCCCCATGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPVKVRS*VAPWPF
Trigger: GAAGGGCCATGGGGCCACCAACGACCTGACCTTCAC...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp AACTGTGAGGCCTGTGACTGCATCCTGAATAAGGCGCAGCACTGTGCCTGGGGCGTGAAGGTCAGGTCGTaGGTGGCCCCATGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: NCEACDCILNKAQHCAWGVKVRS*VAPWPF
Trigger: GAAGGGCCATGGGGCCACCAACGACCTGACCTTCAC...GCCCCAGGCACAGTGCTGCGCCTTATTCAGGATGCAGTCACAGGCCTCACAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS TCA 90 bp GCTCCTGCAGGGCCTTCTCCATCTCCTTCATGTCCACCTCCTCTGTaGAGGTCAGGTCGTTGGTGGCCCCATGGCCCTTCACATCTGCCT +
Preference number: 5 (lower is better)
Translates to: APAGPSPSPSCPPPL*RSGRWWPHGPSHLP
Trigger: AGGCAGATGTGAAGGGCCATGGGGCCACCAACGACCTGACCTTCACAGAGGAGGTGGACATGAAGGAGATGGAGAAGGCCCTGCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449956.2
ENST00000465314.5
ENST00000621946.4
CDS CCA 90 bp GGCTCACCGGTGTGGCTTCTGCATCTTCCCCAGGCTTGTCGGCAATaGCCCTCTCATCCTCGTTGTCCTCAGGCTTGGTCACCACCATTG +
Preference number: 5 (lower is better)
Translates to: GSPVWLLHLPQACRQ*PSHPRCPQAWSPPL
Trigger: CAATGGTGGTGACCAAGCCTGAGGACAACGAGGATGAGAGGGCCATTGCCGACAAGCCTGGGGAAGATGCAGAAGCCACACCGGTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449956.2
CDS CCA 90 bp CAGCATACTGATGCCCCTCAGCAGCCCGTCATTGATGTTGGTCACTaGGACACAGACAGACAGCACCGTGGGAGGGTGTCCTCAGGGTGC +
Preference number: 5 (lower is better)
Translates to: QHTDAPQQPVIDVGH*DTDRQHRGRVSSGC
Trigger: GCACCCTGAGGACACCCTCCCACGGTGCTGTCTGTCTGTGTCCCAGTGACCAACATCAATGACGGGCTGCTGAGGGGCATCAGTATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464804.1
CDS CCA 90 bp CACTGTTTACCACGCTCCGGCCTTTCTGAGCACCGCTTTTCCCCTTaGAGATCAGGGCTCCTGGCTGGGCACAGGCCTTGGCTGATTCAG +
Preference number: 5 (lower is better)
Translates to: HCLPRSGLSEHRFSP*RSGLLAGHRPWLIQ
Trigger: CTGAATCAGCCAAGGCCTGTGCCCAGCCAGGAGCCCTGATCTCCAAGGGGAAAAGCGGTGCTCAGAAAGGCCGGAGCGTGGTAAACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463893.1
CDS-3UTR CAA 90 bp GAAAGTGCTCGGCACGGCCCTGTTCCACAGGGTGATCTTCTCCGTTGTCACCTCGCCCTCTCATCCTCGTaGTCCTCAGGCTTGGTCACC +
Preference number: 5 (lower is better)
Translates to: ESARHGPVPQGDLLRCHLALSSS*SSGLVT
Trigger: GGTGACCAAGCCTGAGGACAACGAGGATGAGAGGGC...GAGGTGACAACGGAGAAGATCACCCTGTGGAACAGGGCCGTGCCGAGCACTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS CCA 90 bp CAGGATAGCGTTCTCGGGGTACTCCATCTCCACACCCGTCAGCAGTaGGTTGGCCACCTCCTCATAGAAGCCCTGCAACTGCAAATCGGC +
Preference number: 5 (lower is better)
Translates to: QDSVLGVLHLHTRQQ*VGHLLIEALQLQIG
Trigger: GCCGATTTGCAGTTGCAGGGCTTCTATGAGGAGGTGGCCAACCCACTGCTGACGGGTGTGGAGATGGAGTACCCCGAGAACGCTATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000464804.1
ENST00000621946.4
CDS-3UTR CAA 90 bp ATCAGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATGACCAAGCCGGCCGTCTaGCCCTGGGACACAGCCTTT +
Preference number: 5 (lower is better)
Translates to: ISPSPLLWTNQQTTFVPMTKPAV*PWDTAF
Trigger: AAAGGCTGTGTCCCAGGGCAAGACGGCCGGCTTGGT...CATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CAA 90 bp GCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTTTCCTCCCAGAGGCCTaGACCAAGCCGGCCGTCTTG +
Preference number: 5 (lower is better)
Translates to: AHVPDAIKSGPSIPTGAGFLPEA*TKPAVL
Trigger: CAAGACGGCCGGCTTGGTCAAGGCCTCTGGGAGGAA...ACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGTTCCTCCCAGAGGCCTaGACCAAGCCGGCCGTCTTG +
Preference number: 5 (lower is better)
Translates to: VSGEAQEVAFLLAIPSFEFLPEA*TKPAVL
Trigger: CAAGACGGCCGGCTTGGTCAAGGCCTCTGGGAGGAA...CTCAAAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTGGGTCCCAGTTGCCCTGCCTGCAGCCACGTaGACCGAGACTGTGAACTTC +
Preference number: 5 (lower is better)
Translates to: VAFLLAIPSFELLWVPVALPAAT*TETVNF
Trigger: GAAGTTCACAGTCTCGGTCAACGTGGCTGCAGGCAG...GGCAACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAAGGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTCGCCATGGGCGTTCTaGCGCTTCTCCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LCQWRGPRSCLPASHPLFSPWAF*RFSSSC
Trigger: GCAGCTGCTGGAGAAGCGCAAGAACGCCCATGGCGA...AAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CATGGACAGCCCATCCTGCGTGACTGTGACTGTGTCCAGCCAGCTGAAAGTGCTTCAGGGCTGCCTCTCTaGTCGCCAGTGATCTGCCCA +
Preference number: 5 (lower is better)
Translates to: HGQPILRDCDCVQPAESASGLPL*SPVICP
Trigger: TGGGCAGATCACTGGCGACAAGAGAGGCAGCCCTGA...AGCACTTTCAGCTGGCTGGACACAGTCACAGTCACGCAGGATGGGCTGTCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS TCA 90 bp TTCTCGGGAAGCCAGAGGCTGCCAAGCTGGAGAGCAGAGCCAAGATaGGACAGGGCCACCATGCAAATGCCATCGCTGAATACTCAGGCC +
Preference number: 5 (lower is better)
Translates to: FSGSQRLPSWRAEPR*DRATMQMPSLNTQA
Trigger: GGCCTGAGTATTCAGCGATGGCATTTGCATGGTGGCCCTGTCTCATCTTGGCTCTGCTCTCCAGCTTGGCAGCCTCTGGCTTCCCGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467268.1
ENST00000621946.4
CDS-3UTR CAA 90 bp GTCTCTCAGCTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATGCCGTGTCTGCACGGTaGACGGCTCTCATGGTGACA +
Preference number: 5 (lower is better)
Translates to: VSQLCQWRGPRSCLPASHAVSAR*TALMVT
Trigger: TGTCACCATGAGAGCCGTCAACCGTGCAGACACGGC...ATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAGCTGAGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAACCAAGCCGGCCGTCTaGCCCTGGGACACAGCCTTT +
Preference number: 5 (lower is better)
Translates to: LCAHVPDAIKSGPSIPTGTKPAV*PWDTAF
Trigger: AAAGGCTGTGTCCCAGGGCAAGACGGCCGGCTTGGT...TCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTTTCCTCCCAGAGGCCTaGACCAAGCCGGCCGTCTTG +
Preference number: 5 (lower is better)
Translates to: PCSRCHKIRAIHPNRSWCFLPEA*TKPAVL
Trigger: CAAGACGGCCGGCTTGGTCAAGGCCTCTGGGAGGAA...ACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CAGGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCAGCTCGAAGGTGACTTaGCTGCCTGCAGCCACGTTG +
Preference number: 5 (lower is better)
Translates to: QAPLCAHVPDAIKSGPSISSKVT*LPAATL
Trigger: CAACGTGGCTGCAGGCAGCAAAGTCACCTTCGAGCT...GATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGGTGAAGGTCAGGTCGTaGGTGGCCCCATGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: HVPDAIKSGPSIPTGAGVVKVRS*VAPWPF
Trigger: GAAGGGCCATGGGGCCACCAACGACCTGACCTTCAC...CACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCATCAGCCCTTCTCCGTaGTTGTGGACGAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPISPSP*LWTNQQ
Trigger: CTGCTGGTTCGTCCACAACAACGGAGAAGGGCTGAT...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCGCCATGGGCGTTCTaGCGCTTCTCCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: HVPDAIKSGPSIPTGAGVSPWAF*RFSSSC
Trigger: GCAGCTGCTGGAGAAGCGCAAGAACGCCCATGGCGA...CACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGCCGTGTCTGCACGGTaGACGGCTCTCATGGTGACA +
Preference number: 5 (lower is better)
Translates to: PCSRCHKIRAIHPNRSWCAVSAR*TALMVT
Trigger: TGTCACCATGAGAGCCGTCAACCGTGCAGACACGGC...ACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCATCAAAGGAAACCTCCTaGGCCGTGTCTGCACGGTTG +
Preference number: 5 (lower is better)
Translates to: APLCAHVPDAIKSGPSIPSKETS*AVSARL
Trigger: CAACCGTGCAGACACGGCCAAGGAGGTTTCCTTTGA...TGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CCAGTTGCCTGTTCCCTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGAGGTACATCTCGTACTaGCCCTTGTGCCTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PVACSLEQRLMKACRGWQRYISY*PLCLFS
Trigger: GCTGAAGAGGCACAAGGGCAAGTACGAGATGTACCT...CTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAGGGAACAGGCAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CAGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATGCTCTTCCCAGGAGGTCGTaGGTGATGAAAGAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: QPFSVVVDEPADNLRADALPRRS*VMKEAS
Trigger: TGAGGCCTCTTTCATCACCAACGACCTCCTGGGAAG...AGCATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CAA 90 bp AGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATGCTGCTGCTCTCACCAACATaGGCATCCCCATCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: SPSPLLWTNQQTTFVPMLLLSPT*ASPSVS
Trigger: GCTGACTGATGGGGATGCCAATGTTGGTGAGAGCAG...CAGCATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CAA 90 bp TTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTGGGTCCCAGTTGCCTGTTCCATCAGCCCTTCTCCGTaGTTGTGGACGAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: FLLAIPSFELLWVPVACSISPSP*LWTNQQ
Trigger: CTGCTGGTTCGTCCACAACAACGGAGAAGGGCTGAT...GGAACAGGCAACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CAGGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCTCGTTGTCCTCAGGCTaGGTCACCACCATTGAGGTC +
Preference number: 5 (lower is better)
Translates to: QAPLCAHVPDAIKSGPSISLSSG*VTTIEV
Trigger: GACCTCAATGGTGGTGACCAAGCCTGAGGACAACGA...GATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp AGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATGCTGTCGTTGTCCTCAGGCTaGGTCACCACCATTGAGGTC +
Preference number: 5 (lower is better)
Translates to: SPSPLLWTNQQTTFVPMLSLSSG*VTTIEV
Trigger: GACCTCAATGGTGGTGACCAAGCCTGAGGACAACGA...CAGCATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CAA 90 bp CATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGGCCCTCTCATCCTCGTaGTCCTCAGGCTTGGTCACC +
Preference number: 5 (lower is better)
Translates to: HVPDAIKSGPSIPTGAGVALSSS*SSGLVT
Trigger: GGTGACCAAGCCTGAGGACAACGAGGATGAGAGGGC...CACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAGGGGCTTCATCGATGTaGAAGCAGAGGGCATCGTCT +
Preference number: 5 (lower is better)
Translates to: APLCAHVPDAIKSGPSIPGASSM*KQRASS
Trigger: AGACGATGCCCTCTGCTTCAACATCGATGAAGCCCC...TGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTTCAGGGCTGCCTCTCTaGTCGCCAGTGATCTGCCCA +
Preference number: 5 (lower is better)
Translates to: PCSRCHKIRAIHPNRSWCSGLPL*SPVICP
Trigger: TGGGCAGATCACTGGCGACAAGAGAGGCAGCCCTGA...ACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS TCA 90 bp CAATTAACTCACAGGGATCCTCAGGCTCAGAGAGGGGCACGTTCATaGTTTGGCAATAGGGCTGGGCCTGAGCCCAGGTGTCCCAAGTGT +
Preference number: 5 (lower is better)
Translates to: QLTHRDPQAQRGARS*FGNRAGPEPRCPKC
Trigger: ACACTTGGGACACCTGGGCTCAGGCCCAGCCCTATTGCCAAATCATGAACGTGCCCCTCTCTGAGCCTGAGGATCCCTGTGAGTTAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493136.1
CDS GCA 90 bp TCAGTCAGCATGATGACAATGGAGGTGCTCCTCTCTGGGATTCTGTaGTCCTCTCGGGCCTTGTTCAGCATACTGATGCCCCTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SVSMMTMEVLLSGIL*SSRALFSILMPLSS
Trigger: GCTGCTGAGGGGCATCAGTATGCTGAACAAGGCCCGAGAGGAGCACAGAATCCCAGAGAGGAGCACCTCCATTGTCATCATGCTGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000464804.1
ENST00000465243.6
ENST00000621946.4
CDS CCA 90 bp GGCATCCCCATCAGTCAGCATGATGACAATGGAGGTGCTCCTCTCTaGGATTCTGTGCTCCTCTCGGGCCTTGTTCAGCATACTGATGCC +
Preference number: 5 (lower is better)
Translates to: GIPISQHDDNGGAPL*DSVLLSGLVQHTDA
Trigger: GGCATCAGTATGCTGAACAAGGCCCGAGAGGAGCACAGAATCCCAGAGAGGAGCACCTCCATTGTCATCATGCTGACTGATGGGGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000464804.1
ENST00000465243.6
ENST00000621946.4
CDS-3UTR CAA 90 bp TCTCTCAGCTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCTCAAAGGAAACCTCCTaGGCCGTGTCTGCACGGTTG +
Preference number: 5 (lower is better)
Translates to: SLSCVSGEAQEVAFLLAISKETS*AVSARL
Trigger: CAACCGTGCAGACACGGCCAAGGAGGTTTCCTTTGA...GATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAGCTGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTGGGTCCCAGTTTCAAAGGAAACCTCCTaGGCCGTGTCTGCACGGTTG +
Preference number: 5 (lower is better)
Translates to: EVAFLLAIPSFELLWVPVSKETS*AVSARL
Trigger: CAACCGTGCAGACACGGCCAAGGAGGTTTCCTTTGA...AACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAAGGCAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GAAAGTGCTCGGCACGGCCCTGTTCCACAGGGTGATCTTCTCCGTTGTCACCTCATGGTCAAGGTGAAGTaGGTGATGAAGGCCGTCTTG +
Preference number: 5 (lower is better)
Translates to: ESARHGPVPQGDLLRCHLMVKVK*VMKAVL
Trigger: CAAGACGGCCTTCATCACCAACTTCACCTTGACCAT...GAGGTGACAACGGAGAAGATCACCCTGTGGAACAGGGCCGTGCCGAGCACTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CAA 90 bp CCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACACTGCCTGCAGCCACGTaGACCGAGACTGTGAACTTC +
Preference number: 5 (lower is better)
Translates to: PLCAHVPDAIKSGPSIPTLPAAT*TETVNF
Trigger: GAAGTTCACAGTCTCGGTCAACGTGGCTGCAGGCAG...TGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTCTGCCTGCAGCCACGTaGACCGAGACTGTGAACTTC +
Preference number: 5 (lower is better)
Translates to: VPDAIKSGPSIPTGAGVSLPAAT*TETVNF
Trigger: GAAGTTCACAGTCTCGGTCAACGTGGCTGCAGGCAG...AGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTAGCTCGAAGGTGACTTaGCTGCCTGCAGCCACGTTG +
Preference number: 5 (lower is better)
Translates to: PCSRCHKIRAIHPNRSWCSSKVT*LPAATL
Trigger: CAACGTGGCTGCAGGCAGCAAAGTCACCTTCGAGCT...ACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAAGGTACATCTCGTACTaGCCCTTGTGCCTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: APLCAHVPDAIKSGPSIPRYISY*PLCLFS
Trigger: GCTGAAGAGGCACAAGGGCAAGTACGAGATGTACCT...TGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCTGCTTAGGCTGGACCTaGAGGTACATCTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPCLGWT*RYISYL
Trigger: CAAGTACGAGATGTACCTCAAGGTCCAGCCTAAGCA...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTTGCTCCTCTCGGGCCTaGTTCAGCATACTGATGCCC +
Preference number: 5 (lower is better)
Translates to: VPDAIKSGPSIPTGAGVSCSSRA*FSILMP
Trigger: GGGCATCAGTATGCTGAACAAGGCCCGAGAGGAGCA...AGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp TGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTTGCTCCTCTCGGGCCTaGTTCAGCATACTGATGCCC +
Preference number: 5 (lower is better)
Translates to: CVSGEAQEVAFLLAIPSFCSSRA*FSILMP
Trigger: GGGCATCAGTATGCTGAACAAGGCCCGAGAGGAGCA...AAAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTCTGCTCTCACCAACATaGGCATCCCCATCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: AHVPDAIKSGPSIPTGAGLLSPT*ASPSVS
Trigger: GCTGACTGATGGGGATGCCAATGTTGGTGAGAGCAG...ACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTGGGTCCCAGTTCTGCTCTCACCAACATaGGCATCCCCATCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: EVAFLLAIPSFELLWVPVLLSPT*ASPSVS
Trigger: GCTGACTGATGGGGATGCCAATGTTGGTGAGAGCAG...AACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAAGGCAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTGGGTCCCAGTTTTATACAAGGGGAACTaGCCCCCGATGGCATTCCGC +
Preference number: 5 (lower is better)
Translates to: EVAFLLAIPSFELLWVPVLYKGN*PPMAFR
Trigger: GCGGAATGCCATCGGGGGCAAGTTCCCCTTGTATAA...AACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAAGGCAACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp ACCTGGTGTAGGACGACCACGAAGGTAACCCCATCTCCAAAGGAGACCACCATGTTATACAAGGGGAACTaGCCCCCGATGGCATTCCGC +
Preference number: 5 (lower is better)
Translates to: TWCRTTTKVTPSPKETTMLYKGN*PPMAFR
Trigger: GCGGAATGCCATCGGGGGCAAGTTCCCCTTGTATAA...CATGGTGGTCTCCTTTGGAGATGGGGTTACCTTCGTGGTCGTCCTACACCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CAA 90 bp GTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGGGGGCTTCATCGATGTaGAAGCAGAGGGCATCGTCT +
Preference number: 5 (lower is better)
Translates to: VSGEAQEVAFLLAIPSFEGASSM*KQRASS
Trigger: AGACGATGCCCTCTGCTTCAACATCGATGAAGCCCC...CTCAAAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS GCA 90 bp CGTCTTGGGCAGCTCCACATCAAAGGAAACCTCCTTGGCCGTGTCTaGACGGTTGACGGCTCTCATGGTGACAACATTGTGAGCAAAACG +
Preference number: 5 (lower is better)
Translates to: RLGQLHIKGNLLGRV*TVDGSHGDNIVSKT
Trigger: CGTTTTGCTCACAATGTTGTCACCATGAGAGCCGTCAACCGTGCAGACACGGCCAAGGAGGTTTCCTTTGATGTGGAGCTGCCCAAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS GCA 90 bp AACGTCCTGGCCTCCTGGAGGTTCTCGGGCGTGGCCTGGACTAAGTaGTCTTTCCATGTGGACACATCTCCACTGAACAGGATGAAATTC +
Preference number: 5 (lower is better)
Translates to: NVLASWRFSGVAWTK*SFHVDTSPLNRMKF
Trigger: GAATTTCATCCTGTTCAGTGGAGATGTGTCCACATGGAAAGAGCACTTAGTCCAGGCCACGCCCGAGAACCTCCAGGAGGCCAGGACGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000465243.6
ENST00000621946.4
CDS GCA 90 bp CATAGAAGCCCTGCAACTGCAAATCGGCATCAGAGTCCTCATAAATaGGCCGGGCAAACCCATGGTTCTCCAGGGCCATGTTCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: HRSPATANRHQSPHK*AGQTHGSPGPCSPG
Trigger: TCCTGGAGAACATGGCCCTGGAGAACCATGGGTTTGCCCGGCGCATTTATGAGGACTCTGATGCCGATTTGCAGTTGCAGGGCTTCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000464804.1
ENST00000621946.4
CDS CCA 90 bp GTCATTCCTTTATCCTCCATGCTCTTCACAAACGTCCTGGCCTCCTaGAGGTTCTCGGGCGTGGCCTGGACTAAGTGCTCTTTCCATGTG +
Preference number: 5 (lower is better)
Translates to: VIPLSSMLFTNVLAS*RFSGVAWTKCSFHV
Trigger: CACATGGAAAGAGCACTTAGTCCAGGCCACGCCCGAGAACCTCCAGGAGGCCAGGACGTTTGTGAAGAGCATGGAGGATAAAGGAATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000465243.6
ENST00000621946.4
CDS-3UTR CAA 90 bp CAGGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCATGGTCAAGGTGAAGTaGGTGATGAAGGCCGTCTTG +
Preference number: 5 (lower is better)
Translates to: QAPLCAHVPDAIKSGPSIMVKVK*VMKAVL
Trigger: CAAGACGGCCTTCATCACCAACTTCACCTTGACCAT...GATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTAGGTACATCTCGTACTaGCCCTTGTGCCTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LCQWRGPRSCLPASHPLFRYISY*PLCLFS
Trigger: GCTGAAGAGGCACAAGGGCAAGTACGAGATGTACCT...AAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp TTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTGGGTCCCAGTTGCCTGTTCCTGCTTAGGCTGGACCTaGAGGTACATCTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: FLLAIPSFELLWVPVACSCLGWT*RYISYL
Trigger: CAAGTACGAGATGTACCTCAAGGTCCAGCCTAAGCA...GGAACAGGCAACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACTCGATCTCAAAGTGTTaGACCAGTTGCTTAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LEQRLMKACRGWQLSGLDSISKC*TSCLGW
Trigger: CCAGCCTAAGCAACTGGTCAAACACTTTGAGATCGA...GTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTCTTCCCAGGAGGTCGTaGGTGATGAAAGAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: PCSRCHKIRAIHPNRSWCLPRRS*VMKEAS
Trigger: TGAGGCCTCTTTCATCACCAACGACCTCCTGGGAAG...ACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GTCTCTCAGCTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATTGGTCTAAGCTGGGCTaGAAGGACACATGGCCCTTT +
Preference number: 5 (lower is better)
Translates to: VSQLCQWRGPRSCLPASHWSKLG*KDTWPF
Trigger: AAAGGGCCATGTGTCCTTCAAGCCCAGCTTAGACCA...ATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAGCTGAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CCAGTTGCCTGTTCCCTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGTTGACTATCTGCACGTaGCCAGGAGATTCTCTGTTC +
Preference number: 5 (lower is better)
Translates to: PVACSLEQRLMKACRGWQLTICT*PGDSLF
Trigger: GAACAGAGAATCTCCTGGCAACGTGCAGATAGTCAA...CTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAGGGAACAGGCAACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAGCCCGTCATTGATGTaGGTCATTCCTTTATCCTCC +
Preference number: 5 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPSPSLM*VIPLSS
Trigger: GGAGGATAAAGGAATGACCAACATCAATGACGGGCT...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACATTATACAAGGGGAACTaGCCCCCGATGGCATTCCGC +
Preference number: 5 (lower is better)
Translates to: PLCAHVPDAIKSGPSIPTLYKGN*PPMAFR
Trigger: GCGGAATGCCATCGGGGGCAAGTTCCCCTTGTATAA...TGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACACCATGTTCTTCCTGTaGATCATCATGGACAGCCCA +
Preference number: 5 (lower is better)
Translates to: LEQRLMKACRGWQLSGLDTMFFL*IIMDSP
Trigger: TGGGCTGTCCATGATGATCAACAGGAAGAACATGGT...GTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp TCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTACAGCCCTTCTCCGTTGTaGTGGACGAACCAGCAGACA +
Preference number: 5 (lower is better)
Translates to: SRCHKIRAIHPNRSWCVYSPSPL*WTNQQT
Trigger: TGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCT...GTAGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTAGCCCTTCTCCGTTGTaGTGGACGAACCAGCAGACA +
Preference number: 5 (lower is better)
Translates to: VPDAIKSGPSIPTGAGVSSPSPL*WTNQQT
Trigger: TGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCT...AGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTATCAGCCCTTCTCCGTaGTTGTGGACGAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: VPDAIKSGPSIPTGAGVSISPSP*LWTNQQ
Trigger: CTGCTGGTTCGTCCACAACAACGGAGAAGGGCTGAT...AGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GTCTCTCAGCTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATGCTTGGTCACCACCATaGAGGTCAGTGGAGTCACAA +
Preference number: 5 (lower is better)
Translates to: VSQLCQWRGPRSCLPASHAWSPP*RSVESQ
Trigger: TTGTGACTCCACTGACCTCAATGGTGGTGACCAAGC...ATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAGCTGAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCGTCTTTCTCCGGAATTaGGATGATGAAGTGGGGATC +
Preference number: 5 (lower is better)
Translates to: GPSLCPCSRCHKIRAIHPVFLRN*DDEVGI
Trigger: GATCCCCACTTCATCATCCAAATTCCGGAGAAAGAC...GGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CAGGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCAAAGTGTTTGACCAGTaGCTTAGGCTGGACCTTGAG +
Preference number: 5 (lower is better)
Translates to: QAPLCAHVPDAIKSGPSIKVFDQ*LRLDLE
Trigger: CTCAAGGTCCAGCCTAAGCAACTGGTCAAACACTTT...GATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp TCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTACTGGTCTAAGCTGGGCTaGAAGGACACATGGCCCTTT +
Preference number: 5 (lower is better)
Translates to: SRCHKIRAIHPNRSWCVYWSKLG*KDTWPF
Trigger: AAAGGGCCATGTGTCCTTCAAGCCCAGCTTAGACCA...GTAGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp TGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTGGTCTAAGCTGGGCTaGAAGGACACATGGCCCTTT +
Preference number: 5 (lower is better)
Translates to: CSRCHKIRAIHPNRSWCVWSKLG*KDTWPF
Trigger: AAAGGGCCATGTGTCCTTCAAGCCCAGCTTAGACCA...GACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp TGCGTGACTGTGACTGTGTCCAGCCAGCTGAAAGTGCTCGGCACGGCCCTGTTCCAGATAGTCTTCCTCTaGCATATCTTCCAGGATTCT +
Preference number: 5 (lower is better)
Translates to: CVTVTVSSQLKVLGTALFQIVFL*HIFQDS
Trigger: AGAATCCTGGAAGATATGCAAGAGGAAGACTATCTG...GAACAGGGCCGTGCCGAGCACTTTCAGCTGGCTGGACACAGTCACAGTCACGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CAA 90 bp GCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCACTCAGCAGCCCGTCATaGATGTTGGTCATTCCTTTA +
Preference number: 5 (lower is better)
Translates to: APLCAHVPDAIKSGPSIPLSSPS*MLVIPL
Trigger: TAAAGGAATGACCAACATCAATGACGGGCTGCTGAG...TGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CAGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATGCTCTCAGCAGCCCGTCATaGATGTTGGTCATTCCTTTA +
Preference number: 5 (lower is better)
Translates to: QPFSVVVDEPADNLRADALSSPS*MLVIPL
Trigger: TAAAGGAATGACCAACATCAATGACGGGCTGCTGAG...AGCATCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CAA 90 bp GCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACCATGTTCTTCCTGTaGATCATCATGGACAGCCCA +
Preference number: 5 (lower is better)
Translates to: APLCAHVPDAIKSGPSIPTMFFL*IIMDSP
Trigger: TGGGCTGTCCATGATGATCAACAGGAAGAACATGGT...TGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GTTGCCTTCCTGCTAGCCATCCCCTCTTTTGAGCTGCTGTGGGTCCCAGTTGCCTTTAAAGTCAAAGGGTaGGAAGAATTGCCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: VAFLLAIPSFELLWVPVAFKVKG*EELPQQ
Trigger: CTGCTGGGGCAATTCTTCCAACCCTTTGACTTTAAA...GGCAACTGGGACCCACAGCAGCTCAAAAGAGGGGATGGCTAGCAGGAAGGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGCTTGGTCACCACCATaGAGGTCAGTGGAGTCACAA +
Preference number: 5 (lower is better)
Translates to: PLCAHVPDAIKSGPSIPTAWSPP*RSVESQ
Trigger: TTGTGACTCCACTGACCTCAATGGTGGTGACCAAGC...TGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp ATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTGCATCTTCCCCAGGCTaGTCGGCAATGGCCCTCTCA +
Preference number: 5 (lower is better)
Translates to: MKACRGWQLSGLDLGLYFASSPG*SAMALS
Trigger: TGAGAGGGCCATTGCCGACAAGCCTGGGGAAGATGC...AAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449956.2
CDS-3UTR CAA 90 bp CTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTAAACGGGAGGTCACCTaGGAGTTGATTTTGGTACTG +
Preference number: 5 (lower is better)
Translates to: LCQWRGPRSCLPASHPLFKREVT*ELILVL
Trigger: CAGTACCAAAATCAACTCCAAGGTGACCTCCCGTTT...AAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAATGGTCAAGGTGAAGTaGGTGATGAAGGCCGTCTTG +
Preference number: 5 (lower is better)
Translates to: LCAHVPDAIKSGPSIPTGMVKVK*VMKAVL
Trigger: CAAGACGGCCTTCATCACCAACTTCACCTTGACCAT...TCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp ATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTAGCTCGAAGGTGACTTaGCTGCCTGCAGCCACGTTG +
Preference number: 5 (lower is better)
Translates to: MKACRGWQLSGLDLGLYFSSKVT*LPAATL
Trigger: CAACGTGGCTGCAGGCAGCAAAGTCACCTTCGAGCT...AAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CAATCAGCCCTTCTCCGTTGTTGTGGACGAACCAGCAGACAACCTTCGTGCCGATCGATCTCAAAGTGTTaGACCAGTTGCTTAGGCTGG +
Preference number: 5 (lower is better)
Translates to: QSALLRCCGRTSRQPSCRSISKC*TSCLGW
Trigger: CCAGCCTAAGCAACTGGTCAAACACTTTGAGATCGA...TCGGCACGAAGGTTGTCTGCTGGTTCGTCCACAACAACGGAGAAGGGCTGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CAA 90 bp CAGGCCCCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCATAGTGAAATCTCCATaGAGGAGGGAGTCTGTACAG +
Preference number: 5 (lower is better)
Translates to: QAPLCAHVPDAIKSGPSIIVKSP*RRESVQ
Trigger: CTGTACAGACTCCCTCCTCAATGGAGATTTCACTAT...GATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGGGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CTGGAGCAGAGGCTCATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCAGATAGTCTTCCTCTaGCATATCTTCCAGGATTCT +
Preference number: 5 (lower is better)
Translates to: LEQRLMKACRGWQLSGLDQIVFL*HIFQDS
Trigger: AGAATCCTGGAAGATATGCAAGAGGAAGACTATCTG...GTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCATGAGCCTCTGCTCCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp ATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTTGCTCCTCTCGGGCCTaGTTCAGCATACTGATGCCC +
Preference number: 5 (lower is better)
Translates to: MKACRGWQLSGLDLGLYFCSSRA*FSILMP
Trigger: GGGCATCAGTATGCTGAACAAGGCCCGAGAGGAGCA...AAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CTGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTACCATGTTCTTCCTGTaGATCATCATGGACAGCCCA +
Preference number: 5 (lower is better)
Translates to: LCQWRGPRSCLPASHPLFTMFFL*IIMDSP
Trigger: TGGGCTGTCCATGATGATCAACAGGAAGAACATGGT...AAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTGTCTGGTCTCGACCTaGGACTTTATTTTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: HVPDAIKSGPSIPTGAGVCLVST*DFIFPA
Trigger: GGCTGGGAAAATAAAGTCCAAGGTCGAGACCAGACA...CACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACATGTCTGGTCTCGACCTaGGACTTTATTTTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: PLCAHVPDAIKSGPSIPTCLVST*DFIFPA
Trigger: GGCTGGGAAAATAAAGTCCAAGGTCGAGACCAGACA...TGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS GCA 90 bp AATCACAAAGGCCACGTTCTTAGGCACCACTGGAAGGCCTTGAGGTaGAAAGAAGTGCACGAAGTAGCCATTGACTATCTGCACGTTGCC +
Preference number: 5 (lower is better)
Translates to: NHKGHVLRHHWKALR*KEVHEVAIDYLHVA
Trigger: GGCAACGTGCAGATAGTCAATGGCTACTTCGTGCACTTCTTTGCACCTCAAGGCCTTCCAGTGGTGCCTAAGAACGTGGCCTTTGTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000463893.1
ENST00000465243.6
ENST00000621946.4
CDS-3UTR CAA 90 bp TCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTACAAACGGGAGGTCACCTaGGAGTTGATTTTGGTACTG +
Preference number: 5 (lower is better)
Translates to: SRCHKIRAIHPNRSWCVYKREVT*ELILVL
Trigger: CAGTACCAAAATCAACTCCAAGGTGACCTCCCGTTT...GTAGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp AGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTCCCATGCTTAGGCTGGACCTaGAGGTACATCTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: RHVEAGSCLVSTLDFIFPCLGWT*RYISYL
Trigger: CAAGTACGAGATGTACCTCAAGGTCCAGCCTAAGCA...TGGGAAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp TGTGTCAGTGGAGAGGCCCAAGAAGTTGCCTTCCTGCTAGCCATCCCCTCTTTTAAAGTGTTTGACCAGTaGCTTAGGCTGGACCTTGAG +
Preference number: 5 (lower is better)
Translates to: CVSGEAQEVAFLLAIPSFKVFDQ*LRLDLE
Trigger: CTCAAGGTCCAGCCTAAGCAACTGGTCAAACACTTT...AAAAGAGGGGATGGCTAGCAGGAAGGCAACTTCTTGGGCCTCTCCACTGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAAAAGTGTTTGACCAGTaGCTTAGGCTGGACCTTGAG +
Preference number: 5 (lower is better)
Translates to: LCAHVPDAIKSGPSIPTGKVFDQ*LRLDLE
Trigger: CTCAAGGTCCAGCCTAAGCAACTGGTCAAACACTTT...TCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTTCGATCTCAAAGTGTTaGACCAGTTGCTTAGGCTGG +
Preference number: 5 (lower is better)
Translates to: PCSRCHKIRAIHPNRSWCSISKC*TSCLGW
Trigger: CCAGCCTAAGCAACTGGTCAAACACTTTGAGATCGA...ACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CCTCTCTGTGCCCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACATTGACTATCTGCACGTaGCCAGGAGATTCTCTGTTC +
Preference number: 5 (lower is better)
Translates to: PLCAHVPDAIKSGPSIPTLTICT*PGDSLF
Trigger: GAACAGAGAATCTCCTGGCAACGTGCAGATAGTCAA...TGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGGGCACAGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTTTGACTATCTGCACGTaGCCAGGAGATTCTCTGTTC +
Preference number: 5 (lower is better)
Translates to: PCSRCHKIRAIHPNRSWCLTICT*PGDSLF
Trigger: GAACAGAGAATCTCCTGGCAACGTGCAGATAGTCAA...ACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp TGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCAGCCCGTCATTGATGTaGGTCATTCCTTTATCCTCC +
Preference number: 5 (lower is better)
Translates to: CSRCHKIRAIHPNRSWCVSPSLM*VIPLSS
Trigger: GGAGGATAAAGGAATGACCAACATCAATGACGGGCT...GACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp CCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTCTCAGCAGCCCGTCATaGATGTTGGTCATTCCTTTA +
Preference number: 5 (lower is better)
Translates to: PCSRCHKIRAIHPNRSWCLSSPS*MLVIPL
Trigger: TAAAGGAATGACCAACATCAATGACGGGCTGCTGAG...ACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp ACCTGGTGTAGGACGACCACGAAGGTAACCCCATCTCCAAAGGAGACCACCATGTTTAAAGTCAAAGGGTaGGAAGAATTGCCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: TWCRTTTKVTPSPKETTMFKVKG*EELPQQ
Trigger: CTGCTGGGGCAATTCTTCCAACCCTTTGACTTTAAA...CATGGTGGTCTCCTTTGGAGATGGGGTTACCTTCGTGGTCGTCCTACACCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621946.4
CDS-3UTR CAA 90 bp CCATGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTTTCTCCGGAATTaGGATGATGAAGTGGGGATC +
Preference number: 5 (lower is better)
Translates to: PCSRCHKIRAIHPNRSWCVFLRN*DDEVGI
Trigger: GATCCCCACTTCATCATCCAAATTCCGGAGAAAGAC...ACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS GCA 90 bp GGTTCTCCAGGGCCATGTTCTCCAGGAAGTTATAATTCAGATTGTTaGCAAAGCCCAGGTTATACAAGGGGAACTTGCCCCCGATGGCAT +
Preference number: 5 (lower is better)
Translates to: GSPGPCSPGSYNSDC*QSPGYTRGTCPRWH
Trigger: ATGCCATCGGGGGCAAGTTCCCCTTGTATAACCTGGGCTTTGGCAACAATCTGAATTATAACTTCCTGGAGAACATGGCCCTGGAGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000464804.1
ENST00000621946.4
CDS-3UTR CAA 90 bp AAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTCCCAAACGGGAGGTCACCTaGGAGTTGATTTTGGTACTG +
Preference number: 5 (lower is better)
Translates to: KACRGWQLSGLDLGLYFPKREVT*ELILVL
Trigger: CAGTACCAAAATCAACTCCAAGGTGACCTCCCGTTT...GGGAAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp TGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCATAGTGAAATCTCCATaGAGGAGGGAGTCTGTACAG +
Preference number: 5 (lower is better)
Translates to: CSRCHKIRAIHPNRSWCVIVKSP*RRESVQ
Trigger: CTGTACAGACTCCCTCCTCAATGGAGATTTCACTAT...GACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp TGTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTTTAAAGTCAAAGGGTaGGAAGAATTGCCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: CSRCHKIRAIHPNRSWCVFKVKG*EELPQQ
Trigger: CTGCTGGGGCAATTCTTCCAACCCTTTGACTTTAAA...GACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS TCA 90 bp TTTGATGTGGCTGAAATGCAAGCCATTAAGTCATCTTCTCTCTCTTaGGTAATGCTCACAGCAAACATCTGCCCCACCCCTGGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: FDVAEMQAIKSSSLS*VMLTANICPTPGLP
Trigger: GGGAAGCCCAGGGGTGGGGCAGATGTTTGCTGTGAGCATTACTCAAGAGAGAGAAGATGACTTAATGGCTTGCATTTCAGCCACATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493136.1
CDS CCA 90 bp AAGATGTCTACCTCGATCTCAAAGTGTTTGACCAGTTGCTTAGGCTaGACCTTGAGGTACATCTCGTACTTGCCCTTGTGCCTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: KMSTSISKCLTSCLG*TLRYISYLPLCLFS
Trigger: GCTGAAGAGGCACAAGGGCAAGTACGAGATGTACCTCAAGGTCCAGCCTAAGCAACTGGTCAAACACTTTGAGATCGAGGTAGACATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp GTTCCAGATGCCATAAAATCCGGGCCATCCATCCCAACAGGAGCTGGTGTGTCTCAGATAGTCTTCCTCTaGCATATCTTCCAGGATTCT +
Preference number: 5 (lower is better)
Translates to: VPDAIKSGPSIPTGAGVSQIVFL*HIFQDS
Trigger: AGAATCCTGGAAGATATGCAAGAGGAAGACTATCTG...AGACACACCAGCTCCTGTTGGGATGGATGGCCCGGATTTTATGGCATCTGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS-3UTR CAA 90 bp ATGAAGGCATGTAGAGGCTGGCAGCTGTCTGGTCTCGACCTTGGACTTTATTTTAGCCCGTCATTGATGTaGGTCATTCCTTTATCCTCC +
Preference number: 5 (lower is better)
Translates to: MKACRGWQLSGLDLGLYFSPSLM*VIPLSS
Trigger: GGAGGATAAAGGAATGACCAACATCAATGACGGGCT...AAAATAAAGTCCAAGGTCGAGACCAGACAGCTGCCAGCCTCTACATGCCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449956.2
ENST00000621946.4
CDS CAA 90 bp AGGGGTCGTCACTCTGTGGTGCTCTTTCCCAGGAGTCCTGCGCTGTaGGAGGCTGCCAGGGCAGAGGGCCGTAAGCTGTTTGCCAGCTGT +
Preference number: 6 (lower is better)
Translates to: RGRHSVVLFPRSPAL*EAARAEGRKLFASC
Trigger: ACAGCTGGCAAACAGCTTACGGCCCTCTGCCCTGGCAGCCTCCAACAGCGCAGGACTCCTGGGAAAGAGCACCACAGAGTGACGACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467268.1
CDS CAA 90 bp GAAGGGATGCCTGTGAGGGGCCCTCTTGGGCTACATCCTGCGAGGTaGGAGGGGTCGTCACTCTGTGGTGCTCTTTCCCAGGAGTCCTGC +
Preference number: 6 (lower is better)
Translates to: EGMPVRGPLGLHPAR*EGSSLCGALSQESC
Trigger: GCAGGACTCCTGGGAAAGAGCACCACAGAGTGACGACCCCTCCAACCTCGCAGGATGTAGCCCAAGAGGGCCCCTCACAGGCATCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467268.1
CDS TCA 72 bp GGCACATTGTCCATCTGCCCATCCCGGAGAGCTGAGTaGGTAGCCACGGTGGAGGGACATGTGGCAGGGGCA +
Preference number: 6 (lower is better)
Translates to: GTLSICPSRRAE*VATVEGHVAGA
Trigger: TGCCCCTGCCACATGTCCCTCCACCGTGGCTACTCACTCAGCTCTCCGGGATGGGCAGATGGACAATGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493136.1
CDS TCA 72 bp CTGGTAGCTGGCTGCAGATACAAAGGGAGAGAGGGCTaGGCTAAGCAAGTGGCCCTGGGAGGCGCCCGACGA +
Preference number: 6 (lower is better)
Translates to: LVAGCRYKGREG*AKQVALGGARR
Trigger: TCGTCGGGCGCCTCCCAGGGCCACTTGCTTAGCTCAGCCCTCTCTCCCTTTGTATCTGCAGCCAGCTACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493136.1
CDS CCA 72 bp ACTCACTCAGGTAGGACATGGCGGGGCTCACCGGTGTaGCTGAAAAGCCGAAGGGCAGTGGTGAGCAGGGTC +
Preference number: 6 (lower is better)
Translates to: THSGRTWRGSPV*LKSRRAVVSRV
Trigger: GACCCTGCTCACCACTGCCCTTCGGCTTTTCAGCCACACCGGTGAGCCCCGCCATGTCCTACCTGAGTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493136.1
CDS CCA 72 bp ACAAAGGGAGAGAGGGCTGAGCTAAGCAAGTGGCCCTaGGAGGCGCCCGACGACCCCCATAGGAGTTCAGCT +
Preference number: 6 (lower is better)
Translates to: TKGERAELSKWP*EAPDDPHRSSA
Trigger: AGCTGAACTCCTATGGGGGTCGTCGGGCGCCTCCCAGGGCCACTTGCTTAGCTCAGCCCTCTCTCCCTTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493136.1
CDS CCA 72 bp GTGGGCATTTGGGACCCCCTGTTGAGTAGGGCAATCTaGGGTCTGGTTGAGGGGGTCCCAGCCTCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: VGIWDPLLSRAI*GLVEGVPASSS
Trigger: AGAGCTGGAGGCTGGGACCCCCTCAACCAGACCCCAGATTGCCCTACTCAACAGGGGGTCCCAAATGCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495622.5
CDS CAA 72 bp CCTGTGAGGGGCCCTCTTGGGCTACATCCTGCGAGGTaGGAGGGGTCGTCACTCTGTGGTGCTCTTTCCCAG +
Preference number: 6 (lower is better)
Translates to: PVRGPLGLHPAR*EGSSLCGALSQ
Trigger: CTGGGAAAGAGCACCACAGAGTGACGACCCCTCCAACCTCGCAGGATGTAGCCCAAGAGGGCCCCTCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467268.1
CDS TCA 72 bp GGCTTGAAGGACACATGGCCCACGCTCCGGCCTTTCTaGGCACCGCTTTTCCCCTTGGAGATCAGGGCTCCT +
Preference number: 6 (lower is better)
Translates to: GLKDTWPTLRPF*APLFPLEIRAP
Trigger: AGGAGCCCTGATCTCCAAGGGGAAAAGCGGTGCTCAGAAAGGCCGGAGCGTGGGCCATGTGTCCTTCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465243.6
CDS TCA 72 bp GGGCTGGGGAGGCCCTGCCTAGTGGCAGGGAGTTTGTaGGGTTCCAGTTTTGTGGTGAGAGAGGCACAGAGG +
Preference number: 6 (lower is better)
Translates to: GLGRPCLVAGSL*GSSFVVREAQR
Trigger: CCTCTGTGCCTCTCTCACCACAAAACTGGAACCTCACAAACTCCCTGCCACTAGGCAGGGCCTCCCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493136.1
CDS TCA 72 bp TCAGGGCACATTGTCCATCTGCCCATCCCGGAGAGCTaGGTGAGTAGCCACGGTGGAGGGACATGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: SGHIVHLPIPES*VSSHGGGTCGR
Trigger: CCTGCCACATGTCCCTCCACCGTGGCTACTCACTCAGCTCTCCGGGATGGGCAGATGGACAATGTGCCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493136.1
CDS GCA 72 bp ACCTTCAGCAGTTGGGGAACCAGCTCCATCCTGCCCTaGCCCACTCGGTCCCACCCCCTGGTGAAAGTTCTT +
Preference number: 6 (lower is better)
Translates to: TFSSWGTSSILP*PTRSHPLVKVL
Trigger: AAGAACTTTCACCAGGGGGTGGGACCGAGTGGGGCAGGGCAGGATGGAGCTGGTTCCCCAACTGCTGAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467268.1
CDS GCA 72 bp ACATCCTGCGAGGTTGGAGGGGTCGTCACTCTGTGGTaGTCTTTCCCAGGAGTCCTGCGCTGTTGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: TSCEVGGVVTLW*SFPGVLRCWRL
Trigger: CAGCCTCCAACAGCGCAGGACTCCTGGGAAAGAGCACCACAGAGTGACGACCCCTCCAACCTCGCAGGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467268.1
CDS CCA 72 bp GGTTTTGAGGAGGCTGGTAGCTGGTCAGGTAGGACATaGCGGGGCTCACCGGTGTGGCTTCTGCATCTTCCC +
Preference number: 6 (lower is better)
Translates to: GFEEAGSWSGRT*RGSPVWLLHLP
Trigger: GGGAAGATGCAGAAGCCACACCGGTGAGCCCCGCCATGTCCTACCTGACCAGCTACCAGCCTCCTCAAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449956.2
CDS CCA 72 bp GATGCCCCTCAGCAGCCCGTCATTGATGTTGGTCACTaGGACACAGACAGACAGCACCGTGGGAGGGTGTCC +
Preference number: 6 (lower is better)
Translates to: DAPQQPVIDVGH*DTDRQHRGRVS
Trigger: GGACACCCTCCCACGGTGCTGTCTGTCTGTGTCCCAGTGACCAACATCAATGACGGGCTGCTGAGGGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464804.1
CDS CCA 72 bp ACTCTGTGGTGCTCTTTCCCAGGAGTCCTGCGCTGTTaGAGGCTGCCAGGGCAGAGGGCCGTAAGCTGTTTG +
Preference number: 6 (lower is better)
Translates to: TLWCSFPGVLRC*RLPGQRAVSCL
Trigger: CAAACAGCTTACGGCCCTCTGCCCTGGCAGCCTCCAACAGCGCAGGACTCCTGGGAAAGAGCACCACAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467268.1
CDS CCA 72 bp GCTACATCCTGCGAGGTTGGAGGGGTCGTCACTCTGTaGTGCTCTTTCCCAGGAGTCCTGCGCTGTTGGAGG +
Preference number: 6 (lower is better)
Translates to: ATSCEVGGVVTL*CSFPGVLRCWR
Trigger: CCTCCAACAGCGCAGGACTCCTGGGAAAGAGCACCACAGAGTGACGACCCCTCCAACCTCGCAGGATGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467268.1
CDS CCA 72 bp TGGCAGCTGCCAGCATGTACTCACTCAGGTAGGACATaGCGGGGCTCACCGGTGTGGCTGAAAAGCCGAAGG +
Preference number: 6 (lower is better)
Translates to: WQLPACTHSGRT*RGSPVWLKSRR
Trigger: CCTTCGGCTTTTCAGCCACACCGGTGAGCCCCGCCATGTCCTACCTGAGTGAGTACATGCTGGCAGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493136.1
CDS CAA 72 bp GGGCTCACCGGTGTGGCTTCTGCATCTTCCCCAGGCTaGTCGGCAATGGCCCTCTCATCCTCGTTGTCCTCA +
Preference number: 6 (lower is better)
Translates to: GLTGVASASSPG*SAMALSSSLSS
Trigger: TGAGGACAACGAGGATGAGAGGGCCATTGCCGACAAGCCTGGGGAAGATGCAGAAGCCACACCGGTGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449956.2
CDS TCA 72 bp CACAGGGATCCTCAGGCTCAGAGAGGGGCACGTTCATaGTTTGGCAATAGGGCTGGGCCTGAGCCCAGGTGT +
Preference number: 6 (lower is better)
Translates to: HRDPQAQRGARS*FGNRAGPEPRC
Trigger: ACACCTGGGCTCAGGCCCAGCCCTATTGCCAAATCATGAACGTGCCCCTCTCTGAGCCTGAGGATCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493136.1
CDS GCA 72 bp GGTCAGGTCGTTGGTGGCCCCATGGCCCTTCACATCTaGCTTAAAGCTGTTCATGTCCTCGTCCACCAGGCG +
Preference number: 6 (lower is better)
Translates to: GQVVGGPMALHI*LKAVHVLVHQA
Trigger: CGCCTGGTGGACGAGGACATGAACAGCTTTAAGGCAGATGTGAAGGGCCATGGGGCCACCAACGACCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000465314.5
ENST00000621946.4
CDS CCA 72 bp GTTCTCGGGGTACTCCATCTCCACACCCGTCAGCAGTaGGTTGGCCACCTCCTCATAGAAGCCCTGCAACTG +
Preference number: 6 (lower is better)
Translates to: VLGVLHLHTRQQ*VGHLLIEALQL
Trigger: CAGTTGCAGGGCTTCTATGAGGAGGTGGCCAACCCACTGCTGACGGGTGTGGAGATGGAGTACCCCGAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000464804.1
ENST00000621946.4
CDS CCA 72 bp GAGGAGTCAGCTGTTATAGCCTACACCTTCAGCAGTTaGGGAACCAGCTCCATCCTGCCCTGCCCCACTCGG +
Preference number: 6 (lower is better)
Translates to: EESAVIAYTFSS*GTSSILPCPTR
Trigger: CCGAGTGGGGCAGGGCAGGATGGAGCTGGTTCCCCAACTGCTGAAGGTGTAGGCTATAACAGCTGACTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467268.1
CDS CAA 72 bp GCCGTCTTGGGCAGCTCCACATCAAAGGAAACCTCCTaGGCCGTGTCTGCACGGTTGACGGCTCTCATGGTG +
Preference number: 6 (lower is better)
Translates to: AVLGSSTSKETS*AVSARLTALMV
Trigger: CACCATGAGAGCCGTCAACCGTGCAGACACGGCCAAGGAGGTTTCCTTTGATGTGGAGCTGCCCAAGACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS CAA 72 bp GTGCTCCTCTCTGGGATTCTGTGCTCCTCTCGGGCCTaGTTCAGCATACTGATGCCCCTCAGCAGCCCGTCA +
Preference number: 6 (lower is better)
Translates to: VLLSGILCSSRA*FSILMPLSSPS
Trigger: TGACGGGCTGCTGAGGGGCATCAGTATGCTGAACAAGGCCCGAGAGGAGCACAGAATCCCAGAGAGGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000464804.1
ENST00000465243.6
ENST00000621946.4
CDS CAA 90 bp TCTCGGGCCTTGTTCAGCATACTGATGCCCCTCAGCAGCCCGTCATaGATGTTGGTCACTGGGACACAGACAGACAGCACCGTGGGAGGG +
Preference number: 6 (lower is better)
Translates to: SRALFSILMPLSSPS*MLVTGTQTDSTVGG
Trigger: CCCTCCCACGGTGCTGTCTGTCTGTGTCCCAGTGACCAACATCAATGACGGGCTGCTGAGGGGCATCAGTATGCTGAACAAGGCCCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464804.1
CDS CAA 90 bp AGAGGCACAGAGGACTGTGATCCCCAGCAATTCCCAGCATGGGCATaGGGGCCAGACTGCCTTGGCCTAAGTACCAGCTTGGCCATCTGC +
Preference number: 6 (lower is better)
Translates to: RGTEDCDPQQFPAWA*GPDCLGLSTSLAIC
Trigger: GCAGATGGCCAAGCTGGTACTTAGGCCAAGGCAGTCTGGCCCCAATGCCCATGCTGGGAATTGCTGGGGATCACAGTCCTCTGTGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493136.1
CDS CAA 90 bp GCTTCCCACCCCCTAGTTGGGGTGAGTGAGGCTCACGGCTGTCTGTaGCTTCTTGATAGTAAACACCCACCCACACGTGCACACAGGCGC +
Preference number: 6 (lower is better)
Translates to: ASHPLVGVSEAHGCL*LLDSKHPPTRAHRR
Trigger: GCGCCTGTGTGCACGTGTGGGTGGGTGTTTACTATCAAGAAGCAACAGACAGCCGTGAGCCTCACTCACCCCAACTAGGGGGTGGGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493136.1
CDS CAA 90 bp GCCTTGTTCAGCATACTGATGCCCCTCAGCAGCCCGTCATTGATGTaGGTCACTGGGACACAGACAGACAGCACCGTGGGAGGGTGTCCT +
Preference number: 6 (lower is better)
Translates to: ALFSILMPLSSPSLM*VTGTQTDSTVGGCP
Trigger: AGGACACCCTCCCACGGTGCTGTCTGTCTGTGTCCCAGTGACCAACATCAATGACGGGCTGCTGAGGGGCATCAGTATGCTGAACAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464804.1
CDS GCA 72 bp GCCTCCTGGAGGTTCTCGGGCGTGGCCTGGACTAAGTaGTCTTTCCATGTGGACACATCTCCACTGAACAGG +
Preference number: 6 (lower is better)
Translates to: ASWRFSGVAWTK*SFHVDTSPLNR
Trigger: CCTGTTCAGTGGAGATGTGTCCACATGGAAAGAGCACTTAGTCCAGGCCACGCCCGAGAACCTCCAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000465243.6
ENST00000621946.4
CDS CCA 72 bp GTTCTCGGGGTACTCCATCTCCACACCCGTCAGCAGTaGGTTGGCCACCTCCTCATAGAAGCCCTGAAGTTC +
Preference number: 6 (lower is better)
Translates to: VLGVLHLHTRQQ*VGHLLIEALKF
Trigger: GAACTTCAGGGCTTCTATGAGGAGGTGGCCAACCCACTGCTGACGGGTGTGGAGATGGAGTACCCCGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465314.5
CDS CAA 72 bp TCCCCAGGCTTGTCGGCAATGGCCCTCTCATCCTCGTaGTCCTCAGGCTTGGTCACCACCATTGAGGTCAGT +
Preference number: 6 (lower is better)
Translates to: SPGLSAMALSSS*SSGLVTTIEVS
Trigger: ACTGACCTCAATGGTGGTGACCAAGCCTGAGGACAACGAGGATGAGAGGGCCATTGCCGACAAGCCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449956.2
ENST00000475931.1
ENST00000621946.4
CDS CAA 72 bp GAGGACTGTGATCCCCAGCAATTCCCAGCATGGGCATaGGGGCCAGACTGCCTTGGCCTAAGTACCAGCTTG +
Preference number: 6 (lower is better)
Translates to: EDCDPQQFPAWA*GPDCLGLSTSL
Trigger: CAAGCTGGTACTTAGGCCAAGGCAGTCTGGCCCCAATGCCCATGCTGGGAATTGCTGGGGATCACAGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493136.1
CDS CAA 90 bp TCTGCATCTTCCCCAGGCTTGTCGGCAATGGCCCTCTCATCCTCGTaGTCCTCAGGCTTGGTCACCACCATTGAGGTCAGTGGAGTCACA +
Preference number: 6 (lower is better)
Translates to: SASSPGLSAMALSSS*SSGLVTTIEVSGVT
Trigger: TGTGACTCCACTGACCTCAATGGTGGTGACCAAGCCTGAGGACAACGAGGATGAGAGGGCCATTGCCGACAAGCCTGGGGAAGATGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449956.2
CDS TCA 72 bp AGCCAGAGGCTGCCAAGCTGGAGAGCAGAGCCAAGATaGGACAGGGCCACCATGCAAATGCCATCGCTGAAT +
Preference number: 6 (lower is better)
Translates to: SQRLPSWRAEPR*DRATMQMPSLN
Trigger: ATTCAGCGATGGCATTTGCATGGTGGCCCTGTCTCATCTTGGCTCTGCTCTCCAGCTTGGCAGCCTCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000467268.1
ENST00000621946.4
CDS CCA 72 bp TCACAAACGTCCTGGCCTCCTGGAGGTTCTCGGGCGTaGCCTGGACTAAGTGCTCTTTCCATGTGGACACAT +
Preference number: 6 (lower is better)
Translates to: SQTSWPPGGSRA*PGLSALSMWTH
Trigger: ATGTGTCCACATGGAAAGAGCACTTAGTCCAGGCCACGCCCGAGAACCTCCAGGAGGCCAGGACGTTTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000465243.6
ENST00000621946.4
CDS CCA 72 bp CACACACAGACCCTGTACCTAGTTGCAGTGGGCATTTaGGACCCCCTGTTGAGTAGGGCAATCTGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: HTQTLYLVAVGI*DPLLSRAIWGL
Trigger: CAGACCCCAGATTGCCCTACTCAACAGGGGGTCCCAAATGCCCACTGCAACTAGGTACAGGGTCTGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495622.5
CDS CAA 90 bp ACAATGGAGGTGCTCCTCTCTGGGATTCTGTGCTCCTCTCGGGCCTaGTTCAGCATACTGATGCCCCTCAGCAGCCCGTCATTGATGTTG +
Preference number: 6 (lower is better)
Translates to: TMEVLLSGILCSSRA*FSILMPLSSPSLML
Trigger: CAACATCAATGACGGGCTGCTGAGGGGCATCAGTATGCTGAACAAGGCCCGAGAGGAGCACAGAATCCCAGAGAGGAGCACCTCCATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000464804.1
ENST00000465243.6
ENST00000621946.4
CDS GCA 72 bp CCTGCAACTGCAAATCGGCATCAGAGTCCTCATAAATaGGCCGGGCAAACCCATGGTTCTCCAGGGCCATGT +
Preference number: 6 (lower is better)
Translates to: PATANRHQSPHK*AGQTHGSPGPC
Trigger: ACATGGCCCTGGAGAACCATGGGTTTGCCCGGCGCATTTATGAGGACTCTGATGCCGATTTGCAGTTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000464804.1
ENST00000621946.4
CDS CCA 72 bp TCATTCCTTTATCCTCCATGCTCTTCACAAACGTCCTaGCCTCCTGGAGGTTCTCGGGCGTGGCCTGGACTA +
Preference number: 6 (lower is better)
Translates to: SFLYPPCSSQTS*PPGGSRAWPGL
Trigger: TAGTCCAGGCCACGCCCGAGAACCTCCAGGAGGCCAGGACGTTTGTGAAGAGCATGGAGGATAAAGGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000465243.6
ENST00000621946.4
CDS CCA 72 bp CGGCAATGGCCCTCTCATCCTCGTTGTCCTCAGGCTTaGTCACCACCATTGAGGTCAGTGGAGTCACAAAGT +
Preference number: 6 (lower is better)
Translates to: RQWPSHPRCPQA*SPPLRSVESQS
Trigger: ACTTTGTGACTCCACTGACCTCAATGGTGGTGACCAAGCCTGAGGACAACGAGGATGAGAGGGCCATTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449956.2
ENST00000475931.1
ENST00000621946.4
CDS CCA 72 bp TGTGACTGCATCCTGAATAAGGCGCAGCACTGTGCCTaGGGCTTCATCGATGTTGAAGCAGAGGGCATCGTC +
Preference number: 6 (lower is better)
Translates to: CDCILNKAQHCA*GFIDVEAEGIV
Trigger: GACGATGCCCTCTGCTTCAACATCGATGAAGCCCCAGGCACAGTGCTGCGCCTTATTCAGGATGCAGTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449956.2
ENST00000493136.1
ENST00000495622.5
ENST00000621946.4
CDS CAA 72 bp TCGGCAATGGCCCTCTCATCCTCGTTGTCCTCAGGCTaGGTCACCACCATTGAGGTCAGTGGAGTCACAAAG +
Preference number: 6 (lower is better)
Translates to: SAMALSSSLSSG*VTTIEVSGVTK
Trigger: CTTTGTGACTCCACTGACCTCAATGGTGGTGACCAAGCCTGAGGACAACGAGGATGAGAGGGCCATTGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449956.2
ENST00000475931.1
ENST00000621946.4
CDS CAA 72 bp CCCCTAGTTGGGGTGAGTGAGGCTCACGGCTGTCTGTaGCTTCTTGATAGTAAACACCCACCCACACGTGCA +
Preference number: 6 (lower is better)
Translates to: PLVGVSEAHGCL*LLDSKHPPTRA
Trigger: TGCACGTGTGGGTGGGTGTTTACTATCAAGAAGCAACAGACAGCCGTGAGCCTCACTCACCCCAACTAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493136.1
CDS CAA 90 bp AGCTCCCTTTTTCTTGGCCTCACACACCCATTAGCCCAGGCTACCTaGGAGCTCAGCACTGAGAAGCTACTTAGGGAAGGGGTAGCTTCC +
Preference number: 6 (lower is better)
Translates to: SSLFLGLTHPLAQAT*ELSTEKLLREGVAS
Trigger: GGAAGCTACCCCTTCCCTAAGTAGCTTCTCAGTGCTGAGCTCCAAGGTAGCCTGGGCTAATGGGTGTGTGAGGCCAAGAAAAAGGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465243.6
CDS TCA 72 bp AAGAAGAGAAATGCATTAGAAGCCATAGGGCACTTGTaGGCAGGGACCAGAGCTGGCTGCTTGGCCGACCAG +
Preference number: 6 (lower is better)
Translates to: KKRNALEAIGHL*AGTRAGCLADQ
Trigger: CTGGTCGGCCAAGCAGCCAGCTCTGGTCCCTGCTCACAAGTGCCCTATGGCTTCTAATGCATTTCTCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495622.5
CDS GCA 72 bp CAGCTCCACATCAAAGGAAACCTCCTTGGCCGTGTCTaGACGGTTGACGGCTCTCATGGTGACAACATTGTG +
Preference number: 6 (lower is better)
Translates to: QLHIKGNLLGRV*TVDGSHGDNIV
Trigger: CACAATGTTGTCACCATGAGAGCCGTCAACCGTGCAGACACGGCCAAGGAGGTTTCCTTTGATGTGGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS GCA 72 bp ATGATGACAATGGAGGTGCTCCTCTCTGGGATTCTGTaGTCCTCTCGGGCCTTGTTCAGCATACTGATGCCC +
Preference number: 6 (lower is better)
Translates to: MMTMEVLLSGIL*SSRALFSILMP
Trigger: GGGCATCAGTATGCTGAACAAGGCCCGAGAGGAGCACAGAATCCCAGAGAGGAGCACCTCCATTGTCATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000464804.1
ENST00000465243.6
ENST00000621946.4
CDS CAA 72 bp GTTAGCTCGAAGGTGACTTTGCTGCCTGCAGCCACGTaGACCGAGACTGTGAACTTCTCCAACTTCCTCCCA +
Preference number: 6 (lower is better)
Translates to: VSSKVTLLPAAT*TETVNFSNFLP
Trigger: TGGGAGGAAGTTGGAGAAGTTCACAGTCTCGGTCAACGTGGCTGCAGGCAGCAAAGTCACCTTCGAGCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS CAA 72 bp ATAAGGCGCAGCACTGTGCCTGGGGCTTCATCGATGTaGAAGCAGAGGGCATCGTCTTTCTCCGGAATTTGG +
Preference number: 6 (lower is better)
Translates to: IRRSTVPGASSM*KQRASSFSGIW
Trigger: CCAAATTCCGGAGAAAGACGATGCCCTCTGCTTCAACATCGATGAAGCCCCAGGCACAGTGCTGCGCCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449956.2
ENST00000493136.1
ENST00000495622.5
ENST00000621946.4
CDS CAA 72 bp TTGTTCAGCATACTGATGCCCCTCAGCAGCCCGTCATaGATGTTGGTCACTGGGACACAGACAGACAGCACC +
Preference number: 6 (lower is better)
Translates to: LFSILMPLSSPS*MLVTGTQTDST
Trigger: GGTGCTGTCTGTCTGTGTCCCAGTGACCAACATCAATGACGGGCTGCTGAGGGGCATCAGTATGCTGAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464804.1
CDS GCA 72 bp GGCCACGTTCTTAGGCACCACTGGAAGGCCTTGAGGTaGAAAGAAGTGCACGAAGTAGCCATTGACTATCTG +
Preference number: 6 (lower is better)
Translates to: GHVLRHHWKALR*KEVHEVAIDYL
Trigger: CAGATAGTCAATGGCTACTTCGTGCACTTCTTTGCACCTCAAGGCCTTCCAGTGGTGCCTAAGAACGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000463893.1
ENST00000465243.6
ENST00000621946.4
CDS CCA 72 bp ATCAGTCAGCATGATGACAATGGAGGTGCTCCTCTCTaGGATTCTGTGCTCCTCTCGGGCCTTGTTCAGCAT +
Preference number: 6 (lower is better)
Translates to: ISQHDDNGGAPL*DSVLLSGLVQH
Trigger: ATGCTGAACAAGGCCCGAGAGGAGCACAGAATCCCAGAGAGGAGCACCTCCATTGTCATCATGCTGACTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000464804.1
ENST00000465243.6
ENST00000621946.4
CDS CAA 72 bp CACAAAGGCCACGTTCTTAGGCACCACTGGAAGGCCTaGAGGTGCAAAGAAGTGCACGAAGTAGCCATTGAC +
Preference number: 6 (lower is better)
Translates to: HKGHVLRHHWKA*RCKEVHEVAID
Trigger: GTCAATGGCTACTTCGTGCACTTCTTTGCACCTCAAGGCCTTCCAGTGGTGCCTAAGAACGTGGCCTTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000463893.1
ENST00000465243.6
ENST00000621946.4
CDS GCA 72 bp GATTGTTGCCAAAGCCCAGGTTATACAAGGGGAACTTaGCCCCGATGGCATTCCGCACATTCTCTTGGATTT +
Preference number: 6 (lower is better)
Translates to: DCCQSPGYTRGT*PRWHSAHSLGF
Trigger: AAATCCAAGAGAATGTGCGGAATGCCATCGGGGGCAAGTTCCCCTTGTATAACCTGGGCTTTGGCAACAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000464804.1
ENST00000465243.6
ENST00000621946.4
CDS GCA 72 bp ACTCTTCCCCTAACAATCTCCAGGTGCCTGATAGCCTaGTCCAGGCCTTTCATGTTGGAAGTGCTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: TLPLTISRCLIA*SRPFMLEVLLL
Trigger: AAGAAGAAGCACTTCCAACATGAAAGGCCTGGAGCAGGCTATCAGGCACCTGGAGATTGTTAGGGGAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495622.5
CDS CCA 72 bp ACCTCGATCTCAAAGTGTTTGACCAGTTGCTTAGGCTaGACCTTGAGGTACATCTCGTACTTGCCCTTGTGC +
Preference number: 6 (lower is better)
Translates to: TSISKCLTSCLG*TLRYISYLPLC
Trigger: GCACAAGGGCAAGTACGAGATGTACCTCAAGGTCCAGCCTAAGCAACTGGTCAAACACTTTGAGATCGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS CAA 72 bp AGATTGTTGCCAAAGCCCAGGTTATACAAGGGGAACTaGCCCCCGATGGCATTCCGCACATTCTCTTGGATT +
Preference number: 6 (lower is better)
Translates to: RLLPKPRLYKGN*PPMAFRTFSWI
Trigger: AATCCAAGAGAATGTGCGGAATGCCATCGGGGGCAAGTTCCCCTTGTATAACCTGGGCTTTGGCAACAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000464804.1
ENST00000465243.6
ENST00000621946.4
CDS TCA 72 bp CAACATTGTGAGCAAAACGGGAGGTCACCTTGGAGTTaGTTTTGGTACTGTAGACCTCGATGCCATTGGCCA +
Preference number: 6 (lower is better)
Translates to: QHCEQNGRSPWS*FWYCRPRCHWP
Trigger: TGGCCAATGGCATCGAGGTCTACAGTACCAAAATCAACTCCAAGGTGACCTCCCGTTTTGCTCACAATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS GCA 72 bp GGGCCATGTTCTCCAGGAAGTTATAATTCAGATTGTTaGCAAAGCCCAGGTTATACAAGGGGAACTTGCCCC +
Preference number: 6 (lower is better)
Translates to: GPCSPGSYNSDC*QSPGYTRGTCP
Trigger: GGGGCAAGTTCCCCTTGTATAACCTGGGCTTTGGCAACAATCTGAATTATAACTTCCTGGAGAACATGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000464804.1
ENST00000621946.4
CDS CAA 72 bp ATCTCAAAGTGTTTGACCAGTTGCTTAGGCTGGACCTaGAGGTACATCTCGTACTTGCCCTTGTGCCTCTTC +
Preference number: 6 (lower is better)
Translates to: ISKCLTSCLGWT*RYISYLPLCLF
Trigger: GAAGAGGCACAAGGGCAAGTACGAGATGTACCTCAAGGTCCAGCCTAAGCAACTGGTCAAACACTTTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS CAA 72 bp TTGTTCAGCATACTGATGCCCCTCAGCAGCCCGTCATaGATGTTGGTCATTCCTTTATCCTCCATGCTCTTC +
Preference number: 6 (lower is better)
Translates to: LFSILMPLSSPS*MLVIPLSSMLF
Trigger: GAAGAGCATGGAGGATAAAGGAATGACCAACATCAATGACGGGCTGCTGAGGGGCATCAGTATGCTGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000465243.6
ENST00000621946.4
CDS CAA 90 bp GGCTGGTGGCAATGGGATGTGATTTTAACGTTGGCGCAGGGCTTTTaGATGTGGCTGAAATGCAAGCCATTAAGTCATCTTCTCTCTCTT +
Preference number: 6 (lower is better)
Translates to: GWWQWDVILTLAQGF*MWLKCKPLSHLLSL
Trigger: AAGAGAGAGAAGATGACTTAATGGCTTGCATTTCAGCCACATCAAAAAGCCCTGCGCCAACGTTAAAATCACATCCCATTGCCACCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493136.1
CDS TCA 72 bp TCAGATAGTCTTCCTCTTGCATATCTTCCAGGATTCTaGGAAGGGCCTCCTTTGTCTGCTCTAATTTCCGAC +
Preference number: 6 (lower is better)
Translates to: SDSLPLAYLPGF*EGPPLSALISD
Trigger: GTCGGAAATTAGAGCAGACAAAGGAGGCCCTTCTCAGAATCCTGGAAGATATGCAAGAGGAAGACTATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000463893.1
ENST00000465243.6
ENST00000621946.4
CDS GCA 72 bp AAGATGTCTACCTCGATCTCAAAGTGTTTGACCAGTTaGTTAGGCTGGACCTTGAGGTACATCTCGTACTTG +
Preference number: 6 (lower is better)
Translates to: KMSTSISKCLTS*LGWTLRYISYL
Trigger: CAAGTACGAGATGTACCTCAAGGTCCAGCCTAAGCAACTGGTCAAACACTTTGAGATCGAGGTAGACATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4
CDS CAA 72 bp GAAGATGTCTACCTCGATCTCAAAGTGTTTGACCAGTaGCTTAGGCTGGACCTTGAGGTACATCTCGTACTT +
Preference number: 6 (lower is better)
Translates to: EDVYLDLKVFDQ*LRLDLEVHLVL
Trigger: AAGTACGAGATGTACCTCAAGGTCCAGCCTAAGCAACTGGTCAAACACTTTGAGATCGAGGTAGACATCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000416872.6
ENST00000449956.2
ENST00000621946.4