RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITGB8 (Homo sapiens)

Ensembl gene IDs: ENSG00000105855

Ensembl transcript IDs: ENST00000222573.5, ENST00000460204.1, ENST00000477859.1, ENST00000478974.1, ENST00000537992.5

Found 400 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATTGGGGAAGACAGGGCTCATGGCCCGTGTATCAAGGTCTCAAGCTaGGCACTGGAGAACTCCAGGGAACACTGTTCATACAGGCTATGG +
Preference number: 1 (lower is better)
Translates to: IGEDRAHGPCIKVSS*ALENSREHCSYRLW
Trigger: CCATAGCCTGTATGAACAGTGTTCCCTGGAGTTCTCCAGTGCTCAGCTTGAGACCTTGATACACGGGCCATGAGCCCTGTCTTCCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR CCA 90 bp AAGACAGGGCTCATGGCCCGTGTATCAAGGTCTCAAGCTGAGCACTaGAGAACTCCAGGGAACACTGTTCATACAGGCTATGGTGCGAAG +
Preference number: 1 (lower is better)
Translates to: KTGLMARVSRSQAEH*RTPGNTVHTGYGAK
Trigger: CTTCGCACCATAGCCTGTATGAACAGTGTTCCCTGGAGTTCTCCAGTGCTCAGCTTGAGACCTTGATACACGGGCCATGAGCCCTGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR CCA 90 bp AAGTTAGGGTTTGCTGAAATCATTCGCACTCACGTAAAGTATAAATaGGGACCTGAAAGAGCTTTTGTAAACTCAAGATATGCGGGATCT +
Preference number: 1 (lower is better)
Translates to: KLGFAEIIRTHVKYK*GPERAFVNSRYAGS
Trigger: AGATCCCGCATATCTTGAGTTTACAAAAGCTCTTTCAGGTCCCCATTTATACTTTACGTGAGTGCGAATGATTTCAGCAAACCCTAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR CCA 90 bp TATTTTAAAGATTCAAGAGGTAGCATGATATTGTGCAATGAACACTaGCCTGACAATGAGAAGATAAAAACTCCTTTCCAATGTGGCCAC +
Preference number: 1 (lower is better)
Translates to: YFKDSRGSMILCNEH*PDNEKIKTPFQCGH
Trigger: GTGGCCACATTGGAAAGGAGTTTTTATCTTCTCATTGTCAGGCCAGTGTTCATTGCACAATATCATGCTACCTCTTGAATCTTTAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR-3UTR CCA 90 bp AAGCATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTTGTCCGGAAGACAGGGCTCATaGCCCGTGTATCAAGGTCTC +
Preference number: 2 (lower is better)
Translates to: KHNHNHRLTLSCLQGSLSGRQGS*PVYQGL
Trigger: GAGACCTTGATACACGGGCCATGAGCCCTGTCTTCC...GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR CAA 90 bp TTACTGTACCCTTGTAGTGACACAATGCTAAACTCTCTCACAGCATaGTTCTCTCTGGGAAGCGTAGGGATAACAGGTACCTGTAAAGTG +
Preference number: 2 (lower is better)
Translates to: LLYPCSDTMLNSLTA*FSLGSVGITGTCKV
Trigger: CACTTTACAGGTACCTGTTATCCCTACGCTTCCCAGAGAGAACAATGCTGTGAGAGAGTTTAGCATTGTGTCACTACAAGGGTACAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR-3UTR GCA 90 bp TATAAATGGGGACCTGAAAGAGCTTTTGTAAACTCAAGATATGCGGGATCTGAGTCCTCACATGTCCAGTaGAGGGATTACTGTACCCTT +
Preference number: 2 (lower is better)
Translates to: YKWGPERAFVNSRYAGSESSHVQ*RDYCTL
Trigger: AAGGGTACAGTAATCCCTGCACTGGACATGTGAGGA...CTCAGATCCCGCATATCTTGAGTTTACAAAAGCTCTTTCAGGTCCCCATTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR CAA 90 bp CATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTaGTCCCTTCCTATGGTAACAGCCTTGGTCCACTATAAAGTTAGT +
Preference number: 2 (lower is better)
Translates to: HNHNHRLTLSCLQGS*SLPMVTALVHYKVS
Trigger: ACTAACTTTATAGTGGACCAAGGCTGTTACCATAGGAAGGGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR-3UTR CCA 90 bp TATAAATGGGGACCTGAAAGAGCTTTTGTAAACTCAAGATATGCGGGATCTGAGTGTACAACCAGCAACTaGCATGACCGTGAGCAATTT +
Preference number: 2 (lower is better)
Translates to: YKWGPERAFVNSRYAGSECTTSN*HDREQF
Trigger: AAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACA...CTCAGATCCCGCATATCTTGAGTTTACAAAAGCTCTTTCAGGTCCCCATTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR-3UTR TCA 90 bp AAGCATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTTGTCCTGTCAATCTCTCATTTaGGGAAGGAAATGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: KHNHNHRLTLSCLQGSLSCQSLI*GRKCSS
Trigger: TGAACTGCATTTCCTTCCTCAAATGAGAGATTGACA...GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR CAA 90 bp AAAGTGCTTGGCTGTAGAGGACATCTAACAGAGCTGCTGTGTTTATaGGCTCCAGAACAACTTATTATAGGTTTTTCAGTTCTCTTTAGG +
Preference number: 2 (lower is better)
Translates to: KVLGCRGHLTELLCL*APEQLIIGFSVLFR
Trigger: CCTAAAGAGAACTGAAAAACCTATAATAAGTTGTTCTGGAGCCAATAAACACAGCAGCTCTGTTAGATGTCCTCTACAGCCAAGCACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR-3UTR CCA 90 bp AAGCATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTTGTCCATTAGCATGAAAGACTaGAAGCTGATTATGGACAAT +
Preference number: 2 (lower is better)
Translates to: KHNHNHRLTLSCLQGSLSISMKD*KLIMDN
Trigger: ATTGTCCATAATCAGCTTCCAGTCTTTCATGCTAAT...GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR-3UTR TCA 90 bp CCTTTGAGTCTAATCTACTCTACCAGGTTCCAGGAAGAATATAATTCTACAGAGATGTGGTACTTTGCTTaGGGCAGAATTTCTAACTAT +
Preference number: 2 (lower is better)
Translates to: PLSLIYSTRFQEEYNSTEMWYFA*GRISNY
Trigger: ATAGTTAGAAATTCTGCCTCAAGCAAAGTACCACAT...CTCTGTAGAATTATATTCTTCCTGGAACCTGGTAGAGTAGATTAGACTCAAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR-3UTR GCA 90 bp TATAAATGGGGACCTGAAAGAGCTTTTGTAAACTCAAGATATGCGGGATCTGAGTATATTACAGTAAAGTaGTACAACGACACTAGTCTC +
Preference number: 2 (lower is better)
Translates to: YKWGPERAFVNSRYAGSEYITVK*YNDTSL
Trigger: GAGACTAGTGTCGTTGTAGCACTTTACTGTAATATA...CTCAGATCCCGCATATCTTGAGTTTACAAAAGCTCTTTCAGGTCCCCATTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR-3UTR GCA 90 bp GATGGGGTTAGTCTTCATCAAAATGCAGTATCTAGTACTTTAACTCAAGTGCTGGTAAAGTGTAATCAGTaGTCTTCAGAGGATCTACAT +
Preference number: 2 (lower is better)
Translates to: DGVSLHQNAVSSTLTQVLVKCNQ*SSEDLH
Trigger: ATGTAGATCCTCTGAAGAGCACTGATTACACTTTAC...CAGCACTTGAGTTAAAGTACTAGATACTGCATTTTGATGAAGACTAACCCCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR-3UTR CCA 90 bp ATAACAGAATGCAATCTGCACATGATTGAGCTCCCATGTAACTATATTTCACTTAACTCCTTTCCAATGTaGCCACTTTATCACTTGAGT +
Preference number: 2 (lower is better)
Translates to: ITECNLHMIELPCNYISLNSFPM*PLYHLS
Trigger: ACTCAAGTGATAAAGTGGCCACATTGGAAAGGAGTT...AAGTGAAATATAGTTACATGGGAGCTCAATCATGTGCAGATTGCATTCTGTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR TCA 72 bp GACAGGGCTCATGGCCCGTGTATCAAGGTCTCAAGCTaGGCACTGGAGAACTCCAGGGAACACTGTTCATAC +
Preference number: 3 (lower is better)
Translates to: DRAHGPCIKVSS*ALENSREHCSY
Trigger: GTATGAACAGTGTTCCCTGGAGTTCTCCAGTGCTCAGCTTGAGACCTTGATACACGGGCCATGAGCCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR CCA 72 bp CTCATGGCCCGTGTATCAAGGTCTCAAGCTGAGCACTaGAGAACTCCAGGGAACACTGTTCATACAGGCTAT +
Preference number: 3 (lower is better)
Translates to: LMARVSRSQAEH*RTPGNTVHTGY
Trigger: ATAGCCTGTATGAACAGTGTTCCCTGGAGTTCTCCAGTGCTCAGCTTGAGACCTTGATACACGGGCCATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR CCA 72 bp ACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTaGCATGACCGTGAGCAATTTGTCTCCTCCTGTGAC +
Preference number: 3 (lower is better)
Translates to: TCQSSFECTTSN*HDREQFVSSCD
Trigger: GTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
3UTR-3UTR CAA 90 bp TATAAATGGGGACCTGAAAGAGCTTTTGTAAACTCAAGATATGCGGGATCTGAGACCCTAATTGCGCCATaGCACTTCAGCCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: YKWGPERAFVNSRYAGSETLIAP*HFSLGD
Trigger: GTCACCCAGGCTGAAGTGCAATGGCGCAATTAGGGT...CTCAGATCCCGCATATCTTGAGTTTACAAAAGCTCTTTCAGGTCCCCATTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR-3UTR CAA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTATGACCGTGAGCAATTaGTCTCCTCCTGTGACTTTT +
Preference number: 3 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRMTVSN*SPPVTF
Trigger: AAAAGTCACAGGAGGAGACAAATTGCTCACGGTCAT...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
3UTR-3UTR CAA 90 bp AAGCATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTTGTCCCAGTTCAAGTTAGCATaGAAAGTGCTTGGCTGTAGA +
Preference number: 3 (lower is better)
Translates to: KHNHNHRLTLSCLQGSLSQFKLA*KVLGCR
Trigger: TCTACAGCCAAGCACTTTCAATGCTAACTTGAACTG...GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR-3UTR CAA 90 bp AAGCATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTTGTCCTTTTCTTTTGGAGGGTaGTCAGGCATCCATCCATTT +
Preference number: 3 (lower is better)
Translates to: KHNHNHRLTLSCLQGSLSFSFGG*SGIHPF
Trigger: AAATGGATGGATGCCTGACAACCCTCCAAAAGAAAA...GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR TCA 72 bp TTGTACTTTTATGAATTCTGGCAAGAAGGGTTGGAGTaGTTCTGGGAAAGAACATCCTTAGGCTGCCTTGAA +
Preference number: 3 (lower is better)
Translates to: LYFYEFWQEGLE*FWERTSLGCLE
Trigger: TTCAAGGCAGCCTAAGGATGTTCTTTCCCAGAATCACTCCAACCCTTCTTGCCAGAATTCATAAAAGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR-3UTR CAA 90 bp ATAACAGAATGCAATCTGCACATGATTGAGCTCCCATGTAACTATATTTCACTTATGACCGTGAGCAATTaGTCTCCTCCTGTGACTTTT +
Preference number: 3 (lower is better)
Translates to: ITECNLHMIELPCNYISLMTVSN*SPPVTF
Trigger: AAAAGTCACAGGAGGAGACAAATTGCTCACGGTCAT...AAGTGAAATATAGTTACATGGGAGCTCAATCATGTGCAGATTGCATTCTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR CCA 72 bp GATTCAAGAGGTAGCATGATATTGTGCAATGAACACTaGCCTGACAATGAGAAGATAAAAACTCCTTTCCAA +
Preference number: 3 (lower is better)
Translates to: DSRGSMILCNEH*PDNEKIKTPFQ
Trigger: TTGGAAAGGAGTTTTTATCTTCTCATTGTCAGGCCAGTGTTCATTGCACAATATCATGCTACCTCTTGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR-3UTR CAA 90 bp ATAACAGAATGCAATCTGCACATGATTGAGCTCCCATGTAACTATATTTCACTTCCTATGGTAACAGCCTaGGTCCACTATAAAGTTAGT +
Preference number: 3 (lower is better)
Translates to: ITECNLHMIELPCNYISLPMVTA*VHYKVS
Trigger: ACTAACTTTATAGTGGACCAAGGCTGTTACCATAGG...AAGTGAAATATAGTTACATGGGAGCTCAATCATGTGCAGATTGCATTCTGTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR CCA 72 bp ACAAATGTTTATAAATACGTGTGCACTGCAGTGCAATaGTGTCCCCAGAGAAATAAAATGCATAACAAAGCA +
Preference number: 3 (lower is better)
Translates to: TNVYKYVCTAVQ*CPQRNKMHNKA
Trigger: TGCTTTGTTATGCATTTTATTTCTCTGGGGACACCATTGCACTGCAGTGCACACGTATTTATAAACATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR TCA 72 bp TGCCAATTGAATATTTTAAAGATTCAAGAGGTAGCATaGTATTGTGCAATGAACACTGGCCTGACAATGAGA +
Preference number: 3 (lower is better)
Translates to: CQLNILKIQEVA*YCAMNTGLTMR
Trigger: TCTCATTGTCAGGCCAGTGTTCATTGCACAATATCATGCTACCTCTTGAATCTTTAAAATATTCAATTGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR CCA 72 bp TTTGCTGAAATCATTCGCACTCACGTAAAGTATAAATaGGGACCTGAAAGAGCTTTTGTAAACTCAAGATAT +
Preference number: 3 (lower is better)
Translates to: FAEIIRTHVKYK*GPERAFVNSRY
Trigger: ATATCTTGAGTTTACAAAAGCTCTTTCAGGTCCCCATTTATACTTTACGTGAGTGCGAATGATTTCAGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTGGAGGTTCCGCGAGGTaGCGGAGCCCGGCTTCGCGG +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTGGSAR*RSPASR
Trigger: CCGCGAAGCCGGGCTCCGGCACCTCGCGGAACCTCC...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTGGCCCCGGCGGCGACTaGAGAGAGGGCTCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTGPGGD*REGSAR
Trigger: CCTTGCAGAGCCCTCTCTCCAGTCGCCGCCGGGGCC...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGGGAGGTTCCGCGAGGTaGCGGAGCCCGGCTTCGCGG +
Preference number: 4 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWGGSAR*RSPASR
Trigger: CCGCGAAGCCGGGCTCCGGCACCTCGCGGAACCTCC...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTAGGGGGAGGCGGCTCTaGGAGCGCCCTAGAAGCACC +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTRGRRL*ERPRST
Trigger: GGTGCTTCTAGGGCGCTCCCAGAGCCGCCTCCCCCT...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTTCCTTTTCGCCTCAGTaGGCGGCTCAGGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTSFSPQ*AAQASR
Trigger: GCGGGACGCCTGAGCCGCGCACTGAGGCGAAAAGGA...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCTGCGGGTAGCCGGGTaGACTCAGGGCAGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPLRVAG*TQGREL
Trigger: CAACTCTCTGCCCTGAGTGCACCCGGCTACCCGCAG...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS-3UTR GCA 90 bp TGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTTGGCGCGCTCTGGGGTaGACACGGCTAGGATGCGAG +
Preference number: 4 (lower is better)
Translates to: CQSSFECTTSNWHDREQFWRALG*TRLGCE
Trigger: CTCGCATCCTAGCCGTGTGCACCCCAGAGCGCGCCA...AAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS-3UTR CCA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGAGGGGGAGGCGGCTCTaGGAGCGCCCTAGAAGCACC +
Preference number: 4 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWRGRRL*ERPRST
Trigger: GGTGCTTCTAGGGCGCTCCCAGAGCCGCCTCCCCCT...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACGTGCTGGGCTGCTGCTaGAGGGCACTGGCATCGATC +
Preference number: 4 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDVLGCC*RALASI
Trigger: GATCGATGCCAGTGCCCTTCAGCAGCAGCCCAGCAC...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGTCCTTTTCGCCTCAGTaGGCGGCTCAGGCGTCCCGC +
Preference number: 4 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWSFSPQ*AAQASR
Trigger: GCGGGACGCCTGAGCCGCGCACTGAGGCGAAAAGGA...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp AAGCATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTTGTCCAGTGGGGCCTGCGGCTaGGAGCGCAGGAGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: KHNHNHRLTLSCLQGSLSSGACG*ERRRGG
Trigger: ACCTCCCCTCCTGCGCTCGCAGCCGCAGGCCCCACT...GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGGAGGAAGCTCGGGATaGCAGCAACAGGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHGGSSG*QQQGEA
Trigger: CGCCTCCCCCTGTTGCTGGCATCCCGAGCTTCCTCC...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATCTGGAGAGAGGGCTCTaGAAGGGCTCCGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHLERGL*KGSAAC
Trigger: GCAGGCTGCGGAGCCCTTGCAGAGCCCTCTCTCCAG...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCGCATCTCAGGGCCCCTaGGGCCCTCCCGGCTCGGCA +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLIASQGP*GPPGSA
Trigger: TGCCGAGCCGGGAGGGCCGCAGGGGCCCTGAGATGC...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTCACAGAAGCGGCCGATaGTCCTGGGATCGGTGCACT +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTHRSGR*SWDRCT
Trigger: AGTGCACCGATCCCAGGAGCATCGGCCGCTTCTGTG...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACGTCTTCTGGCCGGGATaGTCTGGCCGGGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDVFWPG*SGRAAL
Trigger: AAGAGCTGCCCGGCCAGAGCATCCCGGCCAGAAGAC...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS-3UTR CCA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGGTGATGCTGGATCTGTaGGAGGGGACGCCGGCGAGG +
Preference number: 4 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWVMLDL*EGTPAR
Trigger: CCTCGCCGGCGTCCCCTCCCACAGATCCAGCATCAC...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCAGGCGAGGCCGGCGATaGGCGGGAGAGGGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLIRRGRR*AGEGWS
Trigger: GGACCACCCCTCTCCCGCCCATCGCCGGCCTCGCCT...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS-3UTR GCA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATCCGGGCAGCTCTTCGTaGCAGCCCAAGACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHPGSSS*QPKTSF
Trigger: GAAGGAGGTCTTGGGCTGGCACGAAGAGCTGCCCGG...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS-3UTR CCA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTCGGCAGCGTCCTGGCTaGCAAGGGAGGAAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRRQRPG*QGRKLG
Trigger: CCCGAGCTTCCTCCCTTGCCAGCCAGGACGCTGCCG...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTGGCCCCGGCGGCGACTaGAGAGAGGGCTCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSGPGGD*REGSAR
Trigger: CCTTGCAGAGCCCTCTCTCCAGTCGCCGCCGGGGCC...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCAGCGCAAGGCACCTaGCACAGGATGCTGCATTTG +
Preference number: 4 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPPAQGT*HRMLHL
Trigger: CAAATGCAGCATCCTGTGCCAGGTGCCTTGCGCTGG...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATAGCGGCCGATGCTCCTaGGATCGGTGCACTCACACC +
Preference number: 4 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHSGRCS*DRCTHT
Trigger: GGTGTGAGTGCACCGATCCCAGGAGCATCGGCCGCT...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTCTGGCCGGGATGCTCTaGCCGGGCAGCTCTTCGTGC +
Preference number: 4 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRLAGML*PGSSSC
Trigger: GCACGAAGAGCTGCCCGGCCAGAGCATCCCGGCCAG...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS-3UTR GCA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTGGAGGAAGCTCGGGATaGCAGCAACAGGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRGGSSG*QQQGEA
Trigger: CGCCTCCCCCTGTTGCTGGCATCCCGAGCTTCCTCC...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTATCAATCAGCGCAGTTaGTTCCACAGGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPINQRS*FHRWAG
Trigger: CCCTGCCCACCTGTGGAAGCAACTGCGCTGATTGAT...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTCTGGAGAGAGGGCTCTaGAAGGGCTCCGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRLERGL*KGSAAC
Trigger: GCAGGCTGCGGAGCCCTTGCAGAGCCCTCTCTCCAG...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTGTCCAGAGCCCGAGTTaGTGGCGCGCTCTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSVQSPS*WRALGC
Trigger: GCACCCCAGAGCGCGCCAGCAACTCGGGCTCTGGAC...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS-3UTR CCA 90 bp TGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTAGTTGCTTCCACAGGTaGGCAGGGAGGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: CQSSFECTTSNWHDREQFSCFHR*AGRPTP
Trigger: TGGTGTTGGCCTCCCTGCCCACCTGTGGAAGCAACT...AAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACAGTTGCTTCCACAGGTaGGCAGGGAGGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDSCFHR*AGRPTP
Trigger: TGGTGTTGGCCTCCCTGCCCACCTGTGGAAGCAACT...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTGTGATGCTGGATCTGTaGGAGGGGACGCCGGCGAGG +
Preference number: 4 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRVMLDL*EGTPAR
Trigger: CCTCGCCGGCGTCCCCTCCCACAGATCCAGCATCAC...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp TGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGCTGCTGAAGGGCACTaGCATCGATCACCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: CQSSFECTTSNWHDREQFAAEGH*HRSPSQ
Trigger: CTGGGAAGGTGATCGATGCCAGTGCCCTTCAGCAGC...AAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTGTAATCCCAACACTCTaGGAGGCCGAGGAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTVIPTL*EAEEGR
Trigger: TCTACCCTCCTCGGCCTCCCAGAGTGTTGGGATTAC...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTCAGAGCCCGAGTTGCTaGCGCGCTCTGGGGTGCACA +
Preference number: 4 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRQSPSC*RALGCT
Trigger: TGTGCACCCCAGAGCGCGCCAGCAACTCGGGCTCTG...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS-3UTR TCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTCAGTCCAAGAACAAGTaGAAACACCCAGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTQSKNK*KHPGCP
Trigger: TGGGCAGCCTGGGTGTTTTCACTTGTTCTTGGACTG...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTTCACAGACAGCTGCCTaGAGCATGGCGTCAAAACCT +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTSQTAA*SMASKP
Trigger: AGGTTTTGACGCCATGCTTCAGGCAGCTGTCTGTGA...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTGTGCTGGGCTGCTGCTaGAGGGCACTGGCATCGATC +
Preference number: 4 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRVLGCC*RALASI
Trigger: GATCGATGCCAGTGCCCTTCAGCAGCAGCCCAGCAC...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTTCTCACGTCGGTAGGTaGCTGCTCTTGTGCAAACAC +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTSHVGR*LLLCKH
Trigger: GTGTTTGCACAAGAGCAGTCACCTACCGACGTGAGA...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTCTTTGCAGCCCCGTCTaGGGAGCAGCGGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRLCSPV*GAAGKD
Trigger: GTCTTTGCCCGCTGCTCCGCAGACGGGGCTGCAAAG...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp TGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTAAGGGCTCCGCAGCCTaGTCCGGGACAAAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: CQSSFECTTSNWHDREQFKGSAA*SGTKKR
Trigger: TCTTTTCTTTGTCCCGGAGCAGGCTGCGGAGCCCTT...AAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACGCATTGGCATCTGCCTaGTTCACACTCTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDALASA*FTLSMP
Trigger: GGGCATGGAGAGTGTGAAGCAGGCAGATGCCAATGC...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTGACAGTTTCCGTCATTaGGCACCACTATGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTDSFRH*APLCLP
Trigger: TGGCAGGCATAGTGGTGCCCAATGACGGAAACTGTC...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGGCTGCTGAAGGGCACTaGCATCGATCACCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWAAEGH*HRSPSQ
Trigger: CTGGGAAGGTGATCGATGCCAGTGCCCTTCAGCAGC...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp TGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGAATTGACACAGTGCTaGGCTGCTGCTGAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: CQSSFECTTSNWHDREQFELTQC*AAAEGH
Trigger: GTGCCCTTCAGCAGCAGCCCAGCACTGTGTCAATTC...AAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp TGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTACATCTATTGTCTTCTaGCCGGGATGCTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: CQSSFECTTSNWHDREQFTSIVF*PGCSGR
Trigger: CCGGCCAGAGCATCCCGGCCAGAAGACAATAGATGT...AAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS-3UTR TCA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACTGTACATTCACTGGGTaGTGCTGGATCTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDCTFTG*CWICGR
Trigger: CCTCCCACAGATCCAGCATCACCCAGTGAATGTACA...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp TGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTTCACAGACAGCTGCCTaGAGCATGGCGTCAAAACCT +
Preference number: 4 (lower is better)
Translates to: CQSSFECTTSNWHDREQFSQTAA*SMASKP
Trigger: AGGTTTTGACGCCATGCTTCAGGCAGCTGTCTGTGA...AAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp AAGCATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTTGTCCGGCAGGAGAACTGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: KHNHNHRLTLSCLQGSLSGRRTA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCAGTTCTCCTGCC...GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCCTTTGCAGCCCCGTCTaGGGAGCAGCGGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLILCSPV*GAAGKD
Trigger: GTCTTTGCCCGCTGCTCCGCAGACGGGGCTGCAAAG...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGGCATTGGCATCTGCCTaGTTCACACTCTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWALASA*FTLSMP
Trigger: GGGCATGGAGAGTGTGAAGCAGGCAGATGCCAATGC...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTACGTGCCTCTTCCACTaGACACTTGGCCCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPTCLFH*TLGPLN
Trigger: ATTCAAAGGGCCAAGTGTGCAGTGGAAGAGGCACGT...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGACACCATCCACATTCTaGACCCAGCGCAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWTPSTF*TQRKAP
Trigger: AGGTGCCTTGCGCTGGGTCCAGAATGTGGATGGTGT...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCAGCTGCCTGAAGCATaGCGTCAAAACCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDQLPEA*RQNLLL
Trigger: CAGAAGGAGGTTTTGACGCCATGCTTCAGGCAGCTG...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp TGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGACAGTTTCCGTCATTaGGCACCACTATGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: CQSSFECTTSNWHDREQFDSFRH*APLCLP
Trigger: TGGCAGGCATAGTGGTGCCCAATGACGGAAACTGTC...AAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTCTATTTCACCAGCAATaGTGCCTGGCAAGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTLFHQQ*CLARGV
Trigger: TACCCCTCTTGCCAGGCACCATTGCTGGTGAAATAG...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGCATCCTTCCATGCCTaGCTTTCTGGACCCATCTGG +
Preference number: 4 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHASFHA*LSGPIW
Trigger: CCAGATGGGTCCAGAAAGCCAGGCATGGAAGGATGC...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCAGCGGCCGATGCTCCTaGGATCGGTGCACTCACACC +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLISGRCS*DRCTHT
Trigger: GGTGTGAGTGCACCGATCCCAGGAGCATCGGCCGCT...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGGTGGGGCTTCTGCTaGATAAATCAGCTTAGCGAA +
Preference number: 4 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDRWGFC*INQLSE
Trigger: TTCGCTAAGCTGATTTATGCAGCAGAAGCCCCACCG...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGTGCTCGTCACGTTTCTaGATCCTTCCATGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWCSSRF*ILPCLA
Trigger: AGCCAGGCATGGAAGGATGCAGAAACGTGACGAGCA...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTAAACTCCTCGACCACTaGAAACAGGCTGATCCTTGT +
Preference number: 4 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPKLLDH*KQADPC
Trigger: ACAAGGATCAGCCTGTTTGCAGTGGTCGAGGAGTTT...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCCACAGAAGCGGCCGATaGTCCTGGGATCGGTGCACT +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLIHRSGR*SWDRCT
Trigger: AGTGCACCGATCCCAGGAGCATCGGCCGCTTCTGTG...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTTCCTCACATGTCCAGTaGAGGGATTACTGTACCCTT +
Preference number: 4 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPSSHVQ*RDYCTL
Trigger: AAGGGTACAGTAATCCCTGCACTGGACATGTGAGGA...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp GAAAGAGTGAAACACGAATCATTTATTCATCTAGCTGTTCTTGTCTATTCAACCCGGCAGCGTCCTGGCTaGCAAGGGAGGAAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: ERVKHESFIHLAVLVYSTRQRPG*QGRKLG
Trigger: CCCGAGCTTCCTCCCTTGCCAGCCAGGACGCTGCCG...GGTTGAATAGACAAGAACAGCTAGATGAATAAATGATTCGTGTTTCACTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTGCACACTTGGCCCTTTaGATTGACACAGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRAHLAL*IDTVLG
Trigger: GCCCAGCACTGTGTCAATTCAAAGGGCCAAGTGTGC...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp AAGCATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTTGTCCAAGGGCTCCGCAGCCTaGTCCGGGACAAAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: KHNHNHRLTLSCLQGSLSKGSAA*SGTKKR
Trigger: TCTTTTCTTTGTCCCGGAGCAGGCTGCGGAGCCCTT...GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCCTCGCCGGTCGTTTTaGAGGCAGACAAATGCAGCG +
Preference number: 4 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSPRRSF*RQTNAA
Trigger: CGCTGCATTTGTCTGCCTGCAAAACGACCGGCGAGG...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTATCCATGGGGAGGCATaGAGTCTAAATTGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPIHGEA*SLNCSH
Trigger: GTGACTACAATTTAGACTGCATGCCTCCCCATGGAT...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp TGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTACTTTCACAGACAGCTaGCTGAAGCATGGCGTCAAA +
Preference number: 4 (lower is better)
Translates to: CQSSFECTTSNWHDREQFTFTDS*LKHGVK
Trigger: TTTGACGCCATGCTTCAGGCAGCTGTCTGTGAAAGT...AAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACACTTTCACAGACAGCTaGCTGAAGCATGGCGTCAAA +
Preference number: 4 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDTFTDS*LKHGVK
Trigger: TTTGACGCCATGCTTCAGGCAGCTGTCTGTGAAAGT...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGGGGCACCACTATGCCTaGCAATTTGCTATCAAGAGC +
Preference number: 4 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWGHHYA*QFAIKS
Trigger: GCTCTTGATAGCAAATTGGCAGGCATAGTGGTGCCC...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATTTTCACCAGCAATGGTaGCTGGCAAGAGGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHFHQQW*LARGVE
Trigger: TTCTACCCCTCTTGCCAGGCACCATTGCTGGTGAAA...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATTTCTGCATCCTTCCATaGCTGGCTTTCTGGACCCAT +
Preference number: 4 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHFCILP*LAFWTH
Trigger: ATGGGTCCAGAAAGCCAGGCATGGAAGGATGCAGAA...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTCTAATGTACATTCACTaGGTGATGCTGGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTLMYIH*VMLDLW
Trigger: CCACAGATCCAGCATCACCCAGTGAATGTACATTAG...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGTCAAAGACAGCACATaGATGTATCCATGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHVKDST*MYPWGG
Trigger: GCCTCCCCATGGATACATCCATGTGCTGTCTTTGAC...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATTCTCAAGCTGAGCACTaGAGAACTCCAGGGAACACT +
Preference number: 4 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHSQAEH*RTPGNT
Trigger: AGTGTTCCCTGGAGTTCTCCAGTGCTCAGCTTGAGA...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTGAGGTTTGCAGCCTTTaGTTCTATTTCACCAGCAAT +
Preference number: 4 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPEVCSL*FYFTSN
Trigger: ATTGCTGGTGAAATAGAATCAAAGGCTGCAAACCTC...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCTGAACTTTCACTTCTaGAATGAGCTTCTGATAGGC +
Preference number: 4 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPLNFHF*NELLIG
Trigger: GCCTATCAGAAGCTCATTTCAGAAGTGAAAGTTCAG...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATAGGCTGATCCTTGTGTaGCTTGCAACTCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHRLILV*LATLRR
Trigger: TCTTCTGAGAGTTGCAAGTCACACAAGGATCAGCCT...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGAGGCTGATCCTTGTGTaGCTTGCAACTCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWRLILV*LATLRR
Trigger: TCTTCTGAGAGTTGCAAGTCACACAAGGATCAGCCT...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCGCACACTTGGCCCTTTaGATTGACACAGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLIAHLAL*IDTVLG
Trigger: GCCCAGCACTGTGTCAATTCAAAGGGCCAAGTGTGC...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp TGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTAATGCTGTTGTTCCATaGGAGCACATGAGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: CQSSFECTTSNWHDREQFNAVVP*EHMRFC
Trigger: GCAAAACCTCATGTGCTCTCATGGAACAACAGCATT...AAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATCAAGAAGGGTTGGAGTaGTTCTGGGAAAGAACATCC +
Preference number: 4 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHQEGLE*FWERTS
Trigger: GGATGTTCTTTCCCAGAATCACTCCAACCCTTCTTG...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGAAACTCCTCGACCACTaGAAACAGGCTGATCCTTGT +
Preference number: 4 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWKLLDH*KQADPC
Trigger: ACAAGGATCAGCCTGTTTGCAGTGGTCGAGGAGTTT...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCTGCTCCTGGGATCGGTaGACTCACACCTTCCACACA +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLICSWDR*THTFHT
Trigger: TGTGTGGAAGGTGTGAGTGCACCGATCCCAGGAGCA...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATACGTCGGTAGGTGACTaGTCTTGTGCAAACACTTTG +
Preference number: 4 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHTSVGD*SCANTL
Trigger: CAAAGTGTTTGCACAAGAGCAGTCACCTACCGACGT...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp AAGCATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTTGTCCACGTGTGCACTGCAGTaGAATGGTGTCCCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: KHNHNHRLTLSCLQGSLSTCALQ*NGVPRE
Trigger: TTCTCTGGGGACACCATTGCACTGCAGTGCACACGT...GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCACACCATCCACATTCTaGACCCAGCGCAAGGCACCT +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLITPSTF*TQRKAP
Trigger: AGGTGCCTTGCGCTGGGTCCAGAATGTGGATGGTGT...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCGCTCCTGGACGCAGCTaGATAGACACTTCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLIAPGRS*IDTSPG
Trigger: ACCAGGAGAAGTGTCTATCCAGCTGCGTCCAGGAGC...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTGCTCCTGGACGCAGCTaGATAGACACTTCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSAPGRS*IDTSPG
Trigger: ACCAGGAGAAGTGTCTATCCAGCTGCGTCCAGGAGC...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp AAGCATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTTGTCCATTAGCTTCGGCTCCTaGACGCAGCTGGATAGACAC +
Preference number: 4 (lower is better)
Translates to: KHNHNHRLTLSCLQGSLSISFGS*TQLDRH
Trigger: GTGTCTATCCAGCTGCGTCCAGGAGCCGAAGCTAAT...GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTATTAGCTTCGGCTCCTaGACGCAGCTGGATAGACAC +
Preference number: 4 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRISFGS*TQLDRH
Trigger: GTGTCTATCCAGCTGCGTCCAGGAGCCGAAGCTAAT...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACACATGGATGTATCCATaGGGAGGCATGCAGTCTAAA +
Preference number: 4 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDTWMYP*GGMQSK
Trigger: TTTAGACTGCATGCCTCCCCATGGATACATCCATGT...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp TATAAATGGGGACCTGAAAGAGCTTTTGTAAACTCAAGATATGCGGGATCTGAGGAATTGACACAGTGCTaGGCTGCTGCTGAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: YKWGPERAFVNSRYAGSEELTQC*AAAEGH
Trigger: GTGCCCTTCAGCAGCAGCCCAGCACTGTGTCAATTC...CTCAGATCCCGCATATCTTGAGTTTACAAAAGCTCTTTCAGGTCCCCATTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACTGTACAACCAGCAACTaGCATGACCGTGAGCAATTT +
Preference number: 4 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDCTTSN*HDREQF
Trigger: AAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACA...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp TATAAATGGGGACCTGAAAGAGCTTTTGTAAACTCAAGATATGCGGGATCTGAGGGAAGACAGGGCTCATaGCCCGTGTATCAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: YKWGPERAFVNSRYAGSEGRQGS*PVYQGL
Trigger: GAGACCTTGATACACGGGCCATGAGCCCTGTCTTCC...CTCAGATCCCGCATATCTTGAGTTTACAAAAGCTCTTTCAGGTCCCCATTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR CAA 72 bp CCTTGTAGTGACACAATGCTAAACTCTCTCACAGCATaGTTCTCTCTGGGAAGCGTAGGGATAACAGGTACC +
Preference number: 4 (lower is better)
Translates to: PCSDTMLNSLTA*FSLGSVGITGT
Trigger: GGTACCTGTTATCCCTACGCTTCCCAGAGAGAACAATGCTGTGAGAGAGTTTAGCATTGTGTCACTACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTCTTTCTCAAACTCAGTaGTGTTCTCTGTCAAAGACA +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTLSQTQ*CSLSKT
Trigger: TGTCTTTGACAGAGAACATCACTGAGTTTGAGAAAG...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTGAGATCTTCTGTCTATaGACTGCTTTCTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTEIFCL*TAFSNS
Trigger: TGAGTTTGAGAAAGCAGTTCATAGACAGAAGATCTC...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTCCATGGTTGTCGATTTaGCATAGACGTTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTPWLSI*HRRCFS
Trigger: TGAAAAACAACGTCTATGTCAAATCGACAACCATGG...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCACTACCAAATTATTaGGGTTTGCAGCCTTTGATT +
Preference number: 4 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPPLPNY*GLQPLI
Trigger: AATCAAAGGCTGCAAACCTCAATAATTTGGTAGTGG...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCTTTCACTTCTGAAATaGGCTTCTGATAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDLSLLK*ASDRLP
Trigger: TGGAAGCCTATCAGAAGCTCATTTCAGAAGTGAAAG...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTCCACTGCAAACAGGCTaGTCCTTGTGTGACTTGCAA +
Preference number: 4 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRPLQTG*SLCDLQ
Trigger: TTGCAAGTCACACAAGGATCAGCCTGTTTGCAGTGG...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCACAGATTTCCATGGTaGTATGGACAAGAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPHRFPW*YGQEKS
Trigger: TGACTTTTCTTGTCCATATCACCATGGAAATCTGTG...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATTTCCATGAGAGCACATaGGGTTTTGCACTGATCAAG +
Preference number: 4 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHFHEST*GFALIK
Trigger: CTTGATCAGTGCAAAACCTCATGTGCTCTCATGGAA...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACGCTGGAGAAACATTCTaGAGTTTGGTCGACATAATG +
Preference number: 4 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDAGETF*SLVDIM
Trigger: CATTATGTCGACCAAACTTCAGAATGTTTCTCCAGC...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTTGTCAATCTCTCATTTaGGGAAGGAAATGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTCQSLI*GRKCSS
Trigger: TGAACTGCATTTCCTTCCTCAAATGAGAGATTGACA...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGAGCTTGAAGTTAAAGTaGTCAGAGCCAAGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWSLKLK*SEPRGK
Trigger: TTTCCCCCTTGGCTCTGATCACTTTAACTTCAAGCT...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCGCCAACACCATTAGTTaGAGCTTTGCAGCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLIANTIS*SFAAPS
Trigger: AGACGGGGCTGCAAAGCTGCAACTAATGGTGTTGGC...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTCGGTGGGGCTTCTGCTaGATAAATCAGCTTAGCGAA +
Preference number: 4 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRRWGFC*INQLSE
Trigger: TTCGCTAAGCTGATTTATGCAGCAGAAGCCCCACCG...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp TATAAATGGGGACCTGAAAGAGCTTTTGTAAACTCAAGATATGCGGGATCTGAGAGCCGGTGGGGCTTCTaGTGCATAAATCAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: YKWGPERAFVNSRYAGSESRWGF*CINQLS
Trigger: GCTAAGCTGATTTATGCAGCAGAAGCCCCACCGGCT...CTCAGATCCCGCATATCTTGAGTTTACAAAAGCTCTTTCAGGTCCCCATTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTAGCCGGTGGGGCTTCTaGTGCATAAATCAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSSRWGF*CINQLS
Trigger: GCTAAGCTGATTTATGCAGCAGAAGCCCCACCGGCT...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGATCCATGGGGAGGCATaGAGTCTAAATTGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWIHGEA*SLNCSH
Trigger: GTGACTACAATTTAGACTGCATGCCTCCCCATGGAT...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CCTTTGAGTCTAATCTACTCTACCAGGTTCCAGGAAGAATATAATTCTACAGAGTGCTCCTGGGATCGGTaGACTCACACCTTCCACACA +
Preference number: 4 (lower is better)
Translates to: PLSLIYSTRFQEEYNSTECSWDR*THTFHT
Trigger: TGTGTGGAAGGTGTGAGTGCACCGATCCCAGGAGCA...CTCTGTAGAATTATATTCTTCCTGGAACCTGGTAGAGTAGATTAGACTCAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp TGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTAATTCCAGTTTTCCTTaGAGGCTGTATAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: CQSSFECTTSNWHDREQFNSSFP*RLYNRW
Trigger: CCACCTGTTATACAGCCTGCAAGGAAAACTGGAATT...AAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGGGTAGCATGATATTGTaGAATGAACACTGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWGSMIL*NEHWPD
Trigger: GTCAGGCCAGTGTTCATTGCACAATATCATGCTACC...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATCGTCTAACACTGAGTTaGCTACAAGGAAGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHRLTLS*LQGSLS
Trigger: GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACG...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp ATAACAGAATGCAATCTGCACATGATTGAGCTCCCATGTAACTATATTTCACTTAAGTCGGCAGCGTCCTaGCTGGCAAGGGAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: ITECNLHMIELPCNYISLKSAAS*LAREEA
Trigger: AGCTTCCTCCCTTGCCAGCCAGGACGCTGCCGACTT...AAGTGAAATATAGTTACATGGGAGCTCAATCATGTGCAGATTGCATTCTGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTTTTCTCTCCAGCCGGTaGGGCTTCTGCTGCATAAAT +
Preference number: 4 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRFLSSR*GFCCIN
Trigger: ATTTATGCAGCAGAAGCCCCACCGGCTGGAGAGAAA...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTGTCAAAACCTCCTTCTaGTGTATCTATGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPVKTSF*CIYVSR
Trigger: TCTGGAAACATAGATACACCAGAAGGAGGTTTTGAC...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
3UTR CAA 72 bp GTCCATAGGGATAAGGTAAGTGTAAATAAATTTCCATaGGGGAAGACAGGGCTCATGGCCCGTGTATCAAGG +
Preference number: 4 (lower is better)
Translates to: VHRDKVSVNKFP*GKTGLMARVSR
Trigger: CCTTGATACACGGGCCATGAGCCCTGTCTTCCCCAATGGAAATTTATTTACACTTACCTTATCCCTATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp CCTTTGAGTCTAATCTACTCTACCAGGTTCCAGGAAGAATATAATTCTACAGAGTGTACATTCACTGGGTaGTGCTGGATCTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PLSLIYSTRFQEEYNSTECTFTG*CWICGR
Trigger: CCTCCCACAGATCCAGCATCACCCAGTGAATGTACA...CTCTGTAGAATTATATTCTTCCTGGAACCTGGTAGAGTAGATTAGACTCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp TGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGAAATGAAATCCTCTTaGACACACCATCCACATTCT +
Preference number: 4 (lower is better)
Translates to: CQSSFECTTSNWHDREQFEMKSS*THHPHS
Trigger: AGAATGTGGATGGTGTGTTCAAGAGGATTTCATTTC...AAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTTGTTTTATCAACGTATaGGCCAAATCCAAGACGAAA +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTCFINV*AKSKTK
Trigger: TTTCGTCTTGGATTTGGCTCATACGTTGATAAAACA...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGCTGGAGAAACATTCTaGAGTTTGGTCGACATAATG +
Preference number: 4 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHAGETF*SLVDIM
Trigger: CATTATGTCGACCAAACTTCAGAATGTTTCTCCAGC...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTAGTGACTCACAGTACTaGATTATGTCAATCTCTCAT +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTSDSQY*IMSISH
Trigger: ATGAGAGATTGACATAATTCAGTACTGTGAGTCACT...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTAGGCTAGAAGAAACCTaGTTAATAGAGTTAGCTTAC +
Preference number: 4 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPRLEET*LIELAY
Trigger: GTAAGCTAACTCTATTAATCAGGTTTCTTCTAGCCT...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp CCTTTGAGTCTAATCTACTCTACCAGGTTCCAGGAAGAATATAATTCTACAGAGGCCAACACCATTAGTTaGAGCTTTGCAGCCCCGTCT +
Preference number: 4 (lower is better)
Translates to: PLSLIYSTRFQEEYNSTEANTIS*SFAAPS
Trigger: AGACGGGGCTGCAAAGCTGCAACTAATGGTGTTGGC...CTCTGTAGAATTATATTCTTCCTGGAACCTGGTAGAGTAGATTAGACTCAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp CCTTTGAGTCTAATCTACTCTACCAGGTTCCAGGAAGAATATAATTCTACAGAGTGCTCGTCACGTTTCTaGATCCTTCCATGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PLSLIYSTRFQEEYNSTECSSRF*ILPCLA
Trigger: AGCCAGGCATGGAAGGATGCAGAAACGTGACGAGCA...CTCTGTAGAATTATATTCTTCCTGGAACCTGGTAGAGTAGATTAGACTCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACAAAGAACTTCATCATTaGTCGTCACGTTTCTGCATC +
Preference number: 4 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDKELHH*SSRFCI
Trigger: GATGCAGAAACGTGACGAGCAATGATGAAGTTCTTT...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACGATCCTTGTGTGACTTaGAACTCTCAGAAGAAAACT +
Preference number: 4 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDDPCVT*NSQKKT
Trigger: AGTTTTCTTCTGAGAGTTGCAAGTCACACAAGGATC...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTTTTGAATTGACACAGTaGTGGGCTGCTGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSFELTQ*WAAAEG
Trigger: CCCTTCAGCAGCAGCCCAGCACTGTGTCAATTCAAA...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTGTAAAGTGTAATCAGTaGTCTTCAGAGGATCTACAT +
Preference number: 4 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPVKCNQ*SSEDLH
Trigger: ATGTAGATCCTCTGAAGAGCACTGATTACACTTTAC...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTGTAAAGTGTAATCAGTaGTCTTCAGAGGATCTACAT +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTVKCNQ*SSEDLH
Trigger: ATGTAGATCCTCTGAAGAGCACTGATTACACTTTAC...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCTTTCTCTCCAGCCGGTaGGGCTTCTGCTGCATAAAT +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLIFLSSR*GFCCIN
Trigger: ATTTATGCAGCAGAAGCCCCACCGGCTGGAGAGAAA...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp ATAACAGAATGCAATCTGCACATGATTGAGCTCCCATGTAACTATATTTCACTTCCAGCGCAAGGCACCTaGCACAGGATGCTGCATTTG +
Preference number: 4 (lower is better)
Translates to: ITECNLHMIELPCNYISLPAQGT*HRMLHL
Trigger: CAAATGCAGCATCCTGTGCCAGGTGCCTTGCGCTGG...AAGTGAAATATAGTTACATGGGAGCTCAATCATGTGCAGATTGCATTCTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTGTCAAAGACAGCACATaGATGTATCCATGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSVKDST*MYPWGG
Trigger: GCCTCCCCATGGATACATCCATGTGCTGTCTTTGAC...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp AAGCATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTTGTCCCTTTCTGGACCCATCTaGACAGATGGCGGTAATGTT +
Preference number: 4 (lower is better)
Translates to: KHNHNHRLTLSCLQGSLSLSGPI*TDGGNV
Trigger: AACATTACCGCCATCTGTCCAGATGGGTCCAGAAAG...GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCAGGCTGTATAACAGGTaGGGCAGTGTTCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLIRLYNR*GSVHRS
Trigger: GCTTCTGTGAACACTGCCCCACCTGTTATACAGCCT...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCACGTAAAGTATAAATaGGGACCTGAAAGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPHVKYK*GPERAF
Trigger: AAAAGCTCTTTCAGGTCCCCATTTATACTTTACGTG...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR CAA 72 bp AATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTaGTCCCTTCCTATGGTAACAGCCTTGGTCCACTAT +
Preference number: 4 (lower is better)
Translates to: NHRLTLSCLQGS*SLPMVTALVHY
Trigger: ATAGTGGACCAAGGCTGTTACCATAGGAAGGGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp GATGGGGTTAGTCTTCATCAAAATGCAGTATCTAGTACTTTAACTCAAGTGCTGCCACTGCAAACAGGCTaGTCCTTGTGTGACTTGCAA +
Preference number: 4 (lower is better)
Translates to: DGVSLHQNAVSSTLTQVLPLQTG*SLCDLQ
Trigger: TTGCAAGTCACACAAGGATCAGCCTGTTTGCAGTGG...CAGCACTTGAGTTAAAGTACTAGATACTGCATTTTGATGAAGACTAACCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCACACTTGTGCACAATaGAGCTATTCAGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWHTCAQ*SYSGFD
Trigger: ATCAAAACCTGAATAGCTTCATTGTGCACAAGTGTG...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp GAAAGAGTGAAACACGAATCATTTATTCATCTAGCTGTTCTTGTCTATTCAACCATCAATCAGCGCAGTTaGTTCCACAGGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ERVKHESFIHLAVLVYSTINQRS*FHRWAG
Trigger: CCCTGCCCACCTGTGGAAGCAACTGCGCTGATTGAT...GGTTGAATAGACAAGAACAGCTAGATGAATAAATGATTCGTGTTTCACTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCAACTGAGCAGCCTTTaGTTATTAAATTGGAAACAA +
Preference number: 4 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPQLSSL*LLNWKQ
Trigger: TTGTTTCCAATTTAATAAGCAAAGGCTGCTCAGTTG...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp GATGGGGTTAGTCTTCATCAAAATGCAGTATCTAGTACTTTAACTCAAGTGCTGGGGCACCACTATGCCTaGCAATTTGCTATCAAGAGC +
Preference number: 4 (lower is better)
Translates to: DGVSLHQNAVSSTLTQVLGHHYA*QFAIKS
Trigger: GCTCTTGATAGCAAATTGGCAGGCATAGTGGTGCCC...CAGCACTTGAGTTAAAGTACTAGATACTGCATTTTGATGAAGACTAACCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp CCTTTGAGTCTAATCTACTCTACCAGGTTCCAGGAAGAATATAATTCTACAGAGTTTCACCAGCAATGGTaGCTGGCAAGAGGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: PLSLIYSTRFQEEYNSTEFHQQW*LARGVE
Trigger: TTCTACCCCTCTTGCCAGGCACCATTGCTGGTGAAA...CTCTGTAGAATTATATTCTTCCTGGAACCTGGTAGAGTAGATTAGACTCAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp CCTTTGAGTCTAATCTACTCTACCAGGTTCCAGGAAGAATATAATTCTACAGAGTTCTGCATCCTTCCATaGCTGGCTTTCTGGACCCAT +
Preference number: 4 (lower is better)
Translates to: PLSLIYSTRFQEEYNSTEFCILP*LAFWTH
Trigger: ATGGGTCCAGAAAGCCAGGCATGGAAGGATGCAGAA...CTCTGTAGAATTATATTCTTCCTGGAACCTGGTAGAGTAGATTAGACTCAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGGATCCTTGTGTGACTTaGAACTCTCAGAAGAAAACT +
Preference number: 4 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWDPCVT*NSQKKT
Trigger: AGTTTTCTTCTGAGAGTTGCAAGTCACACAAGGATC...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp GATGGGGTTAGTCTTCATCAAAATGCAGTATCTAGTACTTTAACTCAAGTGCTGTTTGAATTGACACAGTaGTGGGCTGCTGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: DGVSLHQNAVSSTLTQVLFELTQ*WAAAEG
Trigger: CCCTTCAGCAGCAGCCCAGCACTGTGTCAATTCAAA...CAGCACTTGAGTTAAAGTACTAGATACTGCATTTTGATGAAGACTAACCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp TATAAATGGGGACCTGAAAGAGCTTTTGTAAACTCAAGATATGCGGGATCTGAGACGTCGGTAGGTGACTaGTCTTGTGCAAACACTTTG +
Preference number: 4 (lower is better)
Translates to: YKWGPERAFVNSRYAGSETSVGD*SCANTL
Trigger: CAAAGTGTTTGCACAAGAGCAGTCACCTACCGACGT...CTCAGATCCCGCATATCTTGAGTTTACAAAAGCTCTTTCAGGTCCCCATTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTCTAATGTACATTCACTaGGTGATGCTGGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRLMYIH*VMLDLW
Trigger: CCACAGATCCAGCATCACCCAGTGAATGTACATTAG...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp TGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTTCTCCTGGTGTCACCTaGGTATTAATTTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: CQSSFECTTSNWHDREQFSPGVT*VLISFS
Trigger: TGAAAATGAAATTAATACCCAGGTGACACCAGGAGA...AAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp AAGCATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTTGTCCACATGGATGTATCCATaGGGAGGCATGCAGTCTAAA +
Preference number: 4 (lower is better)
Translates to: KHNHNHRLTLSCLQGSLSTWMYP*GGMQSK
Trigger: TTTAGACTGCATGCCTCCCCATGGATACATCCATGT...GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTTCTGGACCCATCTaGACAGATGGCGGTAATGTT +
Preference number: 4 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSLSGPI*TDGGNV
Trigger: AACATTACCGCCATCTGTCCAGATGGGTCCAGAAAG...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp GAAAGAGTGAAACACGAATCATTTATTCATCTAGCTGTTCTTGTCTATTCAACCGCATCCTTCCATGCCTaGCTTTCTGGACCCATCTGG +
Preference number: 4 (lower is better)
Translates to: ERVKHESFIHLAVLVYSTASFHA*LSGPIW
Trigger: CCAGATGGGTCCAGAAAGCCAGGCATGGAAGGATGC...GGTTGAATAGACAAGAACAGCTAGATGAATAAATGATTCGTGTTTCACTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTTTATTCTCATCACACTaGAAACACTTGGAATCTAGA +
Preference number: 4 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTLFSSH*KHLESR
Trigger: TCTAGATTCCAAGTGTTTCCAGTGTGATGAGAATAA...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCCACTGCACACTTaGCCCTTTGAATTGACACAG +
Preference number: 4 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSLPLHT*PFELTQ
Trigger: CTGTGTCAATTCAAAGGGCCAAGTGTGCAGTGGAAG...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTTTCCATGAGAGCACATaGGGTTTTGCACTGATCAAG +
Preference number: 4 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSFHEST*GFALIK
Trigger: CTTGATCAGTGCAAAACCTCATGTGCTCTCATGGAA...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp ATAACAGAATGCAATCTGCACATGATTGAGCTCCCATGTAACTATATTTCACTTTCTCACGTCGGTAGGTaGCTGCTCTTGTGCAAACAC +
Preference number: 4 (lower is better)
Translates to: ITECNLHMIELPCNYISLSHVGR*LLLCKH
Trigger: GTGTTTGCACAAGAGCAGTCACCTACCGACGTGAGA...AAGTGAAATATAGTTACATGGGAGCTCAATCATGTGCAGATTGCATTCTGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATAGACACATTTTTCTCTaGAAAAGTCAGCAGCTATGT +
Preference number: 4 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHRHIFL*KSQQLC
Trigger: ACATAGCTGCTGACTTTTTCAGAGAAAAATGTGTCT...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTAAGATATGCGGGATCTaGGCTGATAATCAGTTAGGC +
Preference number: 4 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSKICGI*ADNQLG
Trigger: GCCTAACTGATTATCAGCTCAGATCCCGCATATCTT...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATTTTTTCTCCTGCCATTaGTACAAGACATGTAAGATG +
Preference number: 4 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHFFSCH*YKTCKM
Trigger: CATCTTACATGTCTTGTATCAATGGCAGGAGAAAAA...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCACACTGGAAACACTTaGAATCTAGAAAAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDHTGNT*NLEKFH
Trigger: ATGAAACTTTTCTAGATTCCAAGTGTTTCCAGTGTG...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTTGTACAACCAGCAACTaGCATGACCGTGAGCAATTT +
Preference number: 4 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSCTTSN*HDREQF
Trigger: AAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACA...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp AAGCATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTTGTCCGAAATGAAATCCTCTTaGACACACCATCCACATTCT +
Preference number: 4 (lower is better)
Translates to: KHNHNHRLTLSCLQGSLSEMKSS*THHPHS
Trigger: AGAATGTGGATGGTGTGTTCAAGAGGATTTCATTTC...GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp AAGCATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTTGTCCGAGATCTTCTGTCTATaGACTGCTTTCTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: KHNHNHRLTLSCLQGSLSEIFCL*TAFSNS
Trigger: TGAGTTTGAGAAAGCAGTTCATAGACAGAAGATCTC...GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp AAGCATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTTGTCCCCATGGTTGTCGATTTaGCATAGACGTTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: KHNHNHRLTLSCLQGSLSPWLSI*HRRCFS
Trigger: TGAAAAACAACGTCTATGTCAAATCGACAACCATGG...GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp TATAAATGGGGACCTGAAAGAGCTTTTGTAAACTCAAGATATGCGGGATCTGAGGAGGTTTGCAGCCTTTaGTTCTATTTCACCAGCAAT +
Preference number: 4 (lower is better)
Translates to: YKWGPERAFVNSRYAGSEEVCSL*FYFTSN
Trigger: ATTGCTGGTGAAATAGAATCAAAGGCTGCAAACCTC...CTCAGATCCCGCATATCTTGAGTTTACAAAAGCTCTTTCAGGTCCCCATTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCCTGAACTTTCACTTCTaGAATGAGCTTCTGATAGGC +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLILNFHF*NELLIG
Trigger: GCCTATCAGAAGCTCATTTCAGAAGTGAAAGTTCAG...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCGGCCACTTTATCACTTaGGTGTTTTCTGAGAAATCG +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLIGHFIT*VFSEKS
Trigger: CGATTTCTCAGAAAACACTCAAGTGATAAAGTGGCC...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCCTCACACTGACAGCTaGAGTTTCTGTGTATATGAA +
Preference number: 4 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSPHTDS*SFCVYE
Trigger: TTCATATACACAGAAACTGCAGCTGTCAGTGTGAGG...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATTATATTACAGTAAAGTaGTACAACGACACTAGTCTC +
Preference number: 4 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHYITVK*YNDTSL
Trigger: GAGACTAGTGTCGTTGTAGCACTTTACTGTAATATA...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp AAGCATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTTGTCCAAAACTCCACACTTGTaGACAATGAAGCTATTCAGG +
Preference number: 4 (lower is better)
Translates to: KHNHNHRLTLSCLQGSLSKTPHL*TMKLFR
Trigger: CCTGAATAGCTTCATTGTGCACAAGTGTGGAGTTTT...GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp GATGGGGTTAGTCTTCATCAAAATGCAGTATCTAGTACTTTAACTCAAGTGCTGCTATTGTCTTCACCTTaGCCCAGTCCAAGAACAAGT +
Preference number: 4 (lower is better)
Translates to: DGVSLHQNAVSSTLTQVLLLSSP*PSPRTS
Trigger: ACTTGTTCTTGGACTGGGCCAAGGTGAAGACAATAG...CAGCACTTGAGTTAAAGTACTAGATACTGCATTTTGATGAAGACTAACCCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp GAAAGAGTGAAACACGAATCATTTATTCATCTAGCTGTTCTTGTCTATTCAACCAGGCTGTATAACAGGTaGGGCAGTGTTCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: ERVKHESFIHLAVLVYSTRLYNR*GSVHRS
Trigger: GCTTCTGTGAACACTGCCCCACCTGTTATACAGCCT...GGTTGAATAGACAAGAACAGCTAGATGAATAAATGATTCGTGTTTCACTCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp CCTTTGAGTCTAATCTACTCTACCAGGTTCCAGGAAGAATATAATTCTACAGAGAATACAAAAATTAGCTaGGCACGGTGGTGGATGCCT +
Preference number: 4 (lower is better)
Translates to: PLSLIYSTRFQEEYNSTENTKIS*ARWWMP
Trigger: AGGCATCCACCACCGTGCCCAGCTAATTTTTGTATT...CTCTGTAGAATTATATTCTTCCTGGAACCTGGTAGAGTAGATTAGACTCAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCACAGATTTCCATGGTaGTATGGACAAGAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSHRFPW*YGQEKS
Trigger: TGACTTTTCTTGTCCATATCACCATGGAAATCTGTG...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR TCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCTATCTGTTCACCTCTTaGAAGAGTGAAACACGAATC +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLIYLFTS*KSETRI
Trigger: GATTCGTGTTTCACTCTTTCAAGAGGTGAACAGATA...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCTTAGACAATTCTAACTaGAGTAGGTTGCAGAGGCTA +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLILDNSN*SRLQRL
Trigger: TAGCCTCTGCAACCTACTTCAGTTAGAATTGTCTAA...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTAAAGAACTTCATCATTaGTCGTCACGTTTCTGCATC +
Preference number: 4 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSKELHH*SSRFCI
Trigger: GATGCAGAAACGTGACGAGCAATGATGAAGTTCTTT...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp GATGGGGTTAGTCTTCATCAAAATGCAGTATCTAGTACTTTAACTCAAGTGCTGCCTCACACTGACAGCTaGAGTTTCTGTGTATATGAA +
Preference number: 4 (lower is better)
Translates to: DGVSLHQNAVSSTLTQVLPHTDS*SFCVYE
Trigger: TTCATATACACAGAAACTGCAGCTGTCAGTGTGAGG...CAGCACTTGAGTTAAAGTACTAGATACTGCATTTTGATGAAGACTAACCCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp GATGGGGTTAGTCTTCATCAAAATGCAGTATCTAGTACTTTAACTCAAGTGCTGAATTCCAGTTTTCCTTaGAGGCTGTATAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: DGVSLHQNAVSSTLTQVLNSSFP*RLYNRW
Trigger: CCACCTGTTATACAGCCTGCAAGGAAAACTGGAATT...CAGCACTTGAGTTAAAGTACTAGATACTGCATTTTGATGAAGACTAACCCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp AAGCATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTTGTCCAGGGCACAAAAATGCTaGAGTACTAAAAGTGTTGTT +
Preference number: 4 (lower is better)
Translates to: KHNHNHRLTLSCLQGSLSRAQKC*STKSVV
Trigger: AACAACACTTTTAGTACTGCAGCATTTTTGTGCCCT...GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp GATGGGGTTAGTCTTCATCAAAATGCAGTATCTAGTACTTTAACTCAAGTGCTGACACTGCATCTGAAGTaGCAACAGTTGCAAGAAATG +
Preference number: 4 (lower is better)
Translates to: DGVSLHQNAVSSTLTQVLTLHLK*QQLQEM
Trigger: CATTTCTTGCAACTGTTGGCACTTCAGATGCAGTGT...CAGCACTTGAGTTAAAGTACTAGATACTGCATTTTGATGAAGACTAACCCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp ATAACAGAATGCAATCTGCACATGATTGAGCTCCCATGTAACTATATTTCACTTCTTCCACTGCACACTTaGCCCTTTGAATTGACACAG +
Preference number: 4 (lower is better)
Translates to: ITECNLHMIELPCNYISLLPLHT*PFELTQ
Trigger: CTGTGTCAATTCAAAGGGCCAAGTGTGCAGTGGAAG...AAGTGAAATATAGTTACATGGGAGCTCAATCATGTGCAGATTGCATTCTGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR CAA 72 bp TCATCTAGCTGTTCTTGTCTATTCAACCACCAACTGTaGAAGTGTTTGGCAACCTTAGAATATACTTGCCAG +
Preference number: 4 (lower is better)
Translates to: SSSCSCLFNHQL*KCLATLEYTCQ
Trigger: CTGGCAAGTATATTCTAAGGTTGCCAAACACTTCAACAGTTGGTGGTTGAATAGACAAGAACAGCTAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp ATAACAGAATGCAATCTGCACATGATTGAGCTCCCATGTAACTATATTTCACTTAATGCTGTTGTTCCATaGGAGCACATGAGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: ITECNLHMIELPCNYISLNAVVP*EHMRFC
Trigger: GCAAAACCTCATGTGCTCTCATGGAACAACAGCATT...AAGTGAAATATAGTTACATGGGAGCTCAATCATGTGCAGATTGCATTCTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCCACCTCTTGAAAGAGTaGAACACGAATCATTTATTC +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLIHLLKE*NTNHLF
Trigger: GAATAAATGATTCGTGTTTCACTCTTTCAAGAGGTG...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp TATAAATGGGGACCTGAAAGAGCTTTTGTAAACTCAAGATATGCGGGATCTGAGATGTGGTACTTTGCTTaGGGCAGAATTTCTAACTAT +
Preference number: 4 (lower is better)
Translates to: YKWGPERAFVNSRYAGSEMWYFA*GRISNY
Trigger: ATAGTTAGAAATTCTGCCTCAAGCAAAGTACCACAT...CTCAGATCCCGCATATCTTGAGTTTACAAAAGCTCTTTCAGGTCCCCATTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTTCTCCTGGTGTCACCTaGGTATTAATTTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSSPGVT*VLISFS
Trigger: TGAAAATGAAATTAATACCCAGGTGACACCAGGAGA...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTCACACTGGAAACACTTaGAATCTAGAAAAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRHTGNT*NLEKFH
Trigger: ATGAAACTTTTCTAGATTCCAAGTGTTTCCAGTGTG...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTTTATTCTCATCACACTaGAAACACTTGGAATCTAGA +
Preference number: 4 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRLFSSH*KHLESR
Trigger: TCTAGATTCCAAGTGTTTCCAGTGTGATGAGAATAA...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTATTTCCATGGTGATATaGACAAGAAAAGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRISMVI*TRKVIL
Trigger: AAGGATGACTTTTCTTGTCCATATCACCATGGAAAT...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CCA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTATTCCTTTGTTGTCATaGGCAAAACTGTATATCCAC +
Preference number: 4 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSIPLLS*AKLYIH
Trigger: GTGGATATACAGTTTTGCCCATGACAACAAAGGAAT...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp ATAACAGAATGCAATCTGCACATGATTGAGCTCCCATGTAACTATATTTCACTTTGCACTGCAGTGCAATaGTGTCCCCAGAGAAATAAA +
Preference number: 4 (lower is better)
Translates to: ITECNLHMIELPCNYISLCTAVQ*CPQRNK
Trigger: TTTATTTCTCTGGGGACACCATTGCACTGCAGTGCA...AAGTGAAATATAGTTACATGGGAGCTCAATCATGTGCAGATTGCATTCTGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR CAA 72 bp TCAGTTAGGCTCCATGTTGAGTTGTGCGTGACTCAGTaGTCCTTAAATTTCGCCTTCATATTTTGTCATAAA +
Preference number: 4 (lower is better)
Translates to: SVRLHVELCVTQ*SLNFAFIFCHK
Trigger: TTTATGACAAAATATGAAGGCGAAATTTAAGGACAACTGAGTCACGCACAACTCAACATGGAGCCTAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCGTGGGTATTATAACATaGACAGATGGGTATTCTATT +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLIVGIIT*TDGYSI
Trigger: AATAGAATACCCATCTGTGCATGTTATAATACCCAC...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR GCA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTATAAGCACAAGACTTTaGAAGCATAACCACAATCAT +
Preference number: 4 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSISTRL*KHNHNH
Trigger: ATGATTGTGGTTATGCTTGCAAAGTCTTGTGCTTAT...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp GATGGGGTTAGTCTTCATCAAAATGCAGTATCTAGTACTTTAACTCAAGTGCTGGTCAACATAACAGAATaGAATCTGCACATGATTGAG +
Preference number: 4 (lower is better)
Translates to: DGVSLHQNAVSSTLTQVLVNITE*NLHMIE
Trigger: CTCAATCATGTGCAGATTGCATTCTGTTATGTTGAC...CAGCACTTGAGTTAAAGTACTAGATACTGCATTTTGATGAAGACTAACCCCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCATTAGCATGAAAGACTaGAAGCTGATTATGGACAAT +
Preference number: 4 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLIISMKD*KLIMDN
Trigger: ATTGTCCATAATCAGCTTCCAGTCTTTCATGCTAAT...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp GAAAGAGTGAAACACGAATCATTTATTCATCTAGCTGTTCTTGTCTATTCAACCCTTTCTCAAACTCAGTaGTGTTCTCTGTCAAAGACA +
Preference number: 4 (lower is better)
Translates to: ERVKHESFIHLAVLVYSTLSQTQ*CSLSKT
Trigger: TGTCTTTGACAGAGAACATCACTGAGTTTGAGAAAG...GGTTGAATAGACAAGAACAGCTAGATGAATAAATGATTCGTGTTTCACTCTTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp CCTTTGAGTCTAATCTACTCTACCAGGTTCCAGGAAGAATATAATTCTACAGAGGTGGGTATTATAACATaGACAGATGGGTATTCTATT +
Preference number: 4 (lower is better)
Translates to: PLSLIYSTRFQEEYNSTEVGIIT*TDGYSI
Trigger: AATAGAATACCCATCTGTGCATGTTATAATACCCAC...CTCTGTAGAATTATATTCTTCCTGGAACCTGGTAGAGTAGATTAGACTCAAAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp GAAAGAGTGAAACACGAATCATTTATTCATCTAGCTGTTCTTGTCTATTCAACCGTCAAAACCTCCTTCTaGTGTATCTATGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: ERVKHESFIHLAVLVYSTVKTSF*CIYVSR
Trigger: TCTGGAAACATAGATACACCAGAAGGAGGTTTTGAC...GGTTGAATAGACAAGAACAGCTAGATGAATAAATGATTCGTGTTTCACTCTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp CCTTTGAGTCTAATCTACTCTACCAGGTTCCAGGAAGAATATAATTCTACAGAGATTTCCATGGTGATATaGACAAGAAAAGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: PLSLIYSTRFQEEYNSTEISMVI*TRKVIL
Trigger: AAGGATGACTTTTCTTGTCCATATCACCATGGAAAT...CTCTGTAGAATTATATTCTTCCTGGAACCTGGTAGAGTAGATTAGACTCAAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp GAAAGAGTGAAACACGAATCATTTATTCATCTAGCTGTTCTTGTCTATTCAACCAACTCCTTTCCAATGTaGCCACTTTATCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: ERVKHESFIHLAVLVYSTNSFPM*PLYHLS
Trigger: ACTCAAGTGATAAAGTGGCCACATTGGAAAGGAGTT...GGTTGAATAGACAAGAACAGCTAGATGAATAAATGATTCGTGTTTCACTCTTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp ATAACAGAATGCAATCTGCACATGATTGAGCTCCCATGTAACTATATTTCACTTTTGTGCAATGAACACTaGCCTGACAATGAGAAGATA +
Preference number: 4 (lower is better)
Translates to: ITECNLHMIELPCNYISLLCNEH*PDNEKI
Trigger: TATCTTCTCATTGTCAGGCCAGTGTTCATTGCACAA...AAGTGAAATATAGTTACATGGGAGCTCAATCATGTGCAGATTGCATTCTGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp GAAAGAGTGAAACACGAATCATTTATTCATCTAGCTGTTCTTGTCTATTCAACCTGTTTTATCAACGTATaGGCCAAATCCAAGACGAAA +
Preference number: 4 (lower is better)
Translates to: ERVKHESFIHLAVLVYSTCFINV*AKSKTK
Trigger: TTTCGTCTTGGATTTGGCTCATACGTTGATAAAACA...GGTTGAATAGACAAGAACAGCTAGATGAATAAATGATTCGTGTTTCACTCTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR TCA 90 bp GAAAGAGTGAAACACGAATCATTTATTCATCTAGCTGTTCTTGTCTATTCAACCAGACACATTTTTCTCTaGAAAAGTCAGCAGCTATGT +
Preference number: 4 (lower is better)
Translates to: ERVKHESFIHLAVLVYSTRHIFL*KSQQLC
Trigger: ACATAGCTGCTGACTTTTTCAGAGAAAAATGTGTCT...GGTTGAATAGACAAGAACAGCTAGATGAATAAATGATTCGTGTTTCACTCTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp ATAACAGAATGCAATCTGCACATGATTGAGCTCCCATGTAACTATATTTCACTTCATTCTTTGAAGGATTaGATCTCATGCATCCACAAA +
Preference number: 4 (lower is better)
Translates to: ITECNLHMIELPCNYISLHSLKD*ISCIHK
Trigger: TTTGTGGATGCATGAGATGCAATCCTTCAAAGAATG...AAGTGAAATATAGTTACATGGGAGCTCAATCATGTGCAGATTGCATTCTGTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
3UTR CAA 72 bp TGTTCTTGTCTATTCAACCACCAACTGTTGAAGTGTTaGGCAACCTTAGAATATACTTGCCAGATTATTTTT +
Preference number: 4 (lower is better)
Translates to: CSCLFNHQLLKC*ATLEYTCQIIF
Trigger: AAAAATAATCTGGCAAGTATATTCTAAGGTTGCCAAACACTTCAACAGTTGGTGGTTGAATAGACAAGAACA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR GCA 90 bp GAAAGAGTGAAACACGAATCATTTATTCATCTAGCTGTTCTTGTCTATTCAACCCAACTGAGCAGCCTTTaGTTATTAAATTGGAAACAA +
Preference number: 4 (lower is better)
Translates to: ERVKHESFIHLAVLVYSTQLSSL*LLNWKQ
Trigger: TTGTTTCCAATTTAATAAGCAAAGGCTGCTCAGTTG...GGTTGAATAGACAAGAACAGCTAGATGAATAAATGATTCGTGTTTCACTCTTTC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CCA 90 bp ATAACAGAATGCAATCTGCACATGATTGAGCTCCCATGTAACTATATTTCACTTTTAGCTATATCTCAGTaGTCTGCATTGCATAAAATG +
Preference number: 4 (lower is better)
Translates to: ITECNLHMIELPCNYISLLAISQ*SALHKM
Trigger: CATTTTATGCAATGCAGACCACTGAGATATAGCTAA...AAGTGAAATATAGTTACATGGGAGCTCAATCATGTGCAGATTGCATTCTGTTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS GCA 90 bp AGGCGTCCCGCAGTCCAGAGCCCGAGTTGCTGGCGCGCTCTGGGGTaGACACGGCTAGGATGCGAGAGAGGCGAGGCCGGCGATGGGCGG +
Preference number: 5 (lower is better)
Translates to: RRPAVQSPSCWRALG*TRLGCERGEAGDGR
Trigger: CCGCCCATCGCCGGCCTCGCCTCTCTCGCATCCTAGCCGTGTGCACCCCAGAGCGCGCCAGCAACTCGGGCTCTGGACTGCGGGACGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS GCA 90 bp CAGAGCCCGAGTTGCTGGCGCGCTCTGGGGTGCACACGGCTAGGATaGGAGAGAGGCGAGGCCGGCGATGGGCGGGAGAGGGGTGGTCCT +
Preference number: 5 (lower is better)
Translates to: QSPSCWRALGCTRLG*ERGEAGDGRERGGP
Trigger: AGGACCACCCCTCTCCCGCCCATCGCCGGCCTCGCCTCTCTCGCATCCTAGCCGTGTGCACCCCAGAGCGCGCCAGCAACTCGGGCTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS GCA 90 bp CGCCTCAGTGCGCGGCTCAGGCGTCCCGCAGTCCAGAGCCCGAGTTaGTGGCGCGCTCTGGGGTGCACACGGCTAGGATGCGAGAGAGGC +
Preference number: 5 (lower is better)
Translates to: RLSARLRRPAVQSPS*WRALGCTRLGCERG
Trigger: GCCTCTCTCGCATCCTAGCCGTGTGCACCCCAGAGCGCGCCAGCAACTCGGGCTCTGGACTGCGGGACGCCTGAGCCGCGCACTGAGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS CCA 90 bp CCGCGAGAAGCACCTCCTTCGACGGCCAAGGGCCCCGGCGGCGACTaGAGAGAGGGCTCTGCAAGGGCTCCGCAGCCTGCTCCGGGACAA +
Preference number: 5 (lower is better)
Translates to: PREAPPSTAKGPGGD*REGSARAPQPAPGQ
Trigger: TTGTCCCGGAGCAGGCTGCGGAGCCCTTGCAGAGCCCTCTCTCCAGTCGCCGCCGGGGCCCTTGGCCGTCGAAGGAGGTGCTTCTCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000478974.1
CDS CCA 90 bp GCCAGCCCAAGACCTCCTTCGACGGCCAAGGGCCCCGGCGGCGACTaGAGAGAGGGCTCTGCAAGGGCTCCGCAGCCTGCTCCGGGACAA +
Preference number: 5 (lower is better)
Translates to: ASPRPPSTAKGPGGD*REGSARAPQPAPGQ
Trigger: TTGTCCCGGAGCAGGCTGCGGAGCCCTTGCAGAGCCCTCTCTCCAGTCGCCGCCGGGGCCCTTGGCCGTCGAAGGAGGTCTTGGGCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS CCA 90 bp GCAAGGGAGGAAGCTCGGGATGCCAGCAACAGGGGGAGGCGGCTCTaGGAGCGCCCTAGAAGCACCCGCCGACACCCGCAGGCACAGAGC +
Preference number: 5 (lower is better)
Translates to: AREEARDASNRGRRL*ERPRSTRRHPQAQS
Trigger: GCTCTGTGCCTGCGGGTGTCGGCGGGTGCTTCTAGGGCGCTCCCAGAGCCGCCTCCCCCTGTTGCTGGCATCCCGAGCTTCCTCCCTTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS CCA 90 bp CTCAGTGCGCGGCTCAGGCGTCCCGCAGTCCAGAGCCCGAGTTGCTaGCGCGCTCTGGGGTGCACACGGCTAGGATGCGAGAGAGGCGAG +
Preference number: 5 (lower is better)
Translates to: LSARLRRPAVQSPSC*RALGCTRLGCERGE
Trigger: CTCGCCTCTCTCGCATCCTAGCCGTGTGCACCCCAGAGCGCGCCAGCAACTCGGGCTCTGGACTGCGGGACGCCTGAGCCGCGCACTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS CCA 90 bp CCGTCTGCGGAGCAGCGGGCAAAGACAAGTCGGCAGCGTCCTGGCTaGCAAGGGAGGAAGCTCGGGATGCCAGCAACAGGGGGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: PSAEQRAKTSRQRPG*QGRKLGMPATGGGG
Trigger: GCCGCCTCCCCCTGTTGCTGGCATCCCGAGCTTCCTCCCTTGCCAGCCAGGACGCTGCCGACTTGTCTTTGCCCGCTGCTCCGCAGACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS CCA 90 bp AGCCCCGTCTGCGGAGCAGCGGGCAAAGACAAGTCGGCAGCGTCCTaGCTGGCAAGGGAGGAAGCTCGGGATGCCAGCAACAGGGGGAGG +
Preference number: 5 (lower is better)
Translates to: SPVCGAAGKDKSAAS*LAREEARDASNRGR
Trigger: CCTCCCCCTGTTGCTGGCATCCCGAGCTTCCTCCCTTGCCAGCCAGGACGCTGCCGACTTGTCTTTGCCCGCTGCTCCGCAGACGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS GCA 90 bp GCGCAGTTGCTTCCACAGGTGGGCAGGGAGGCCAACACCATTAGTTaGAGCTTTGCAGCCCCGTCTGCGGAGCAGCGGGCAAAGACAAGT +
Preference number: 5 (lower is better)
Translates to: AQLLPQVGREANTIS*SFAAPSAEQRAKTS
Trigger: ACTTGTCTTTGCCCGCTGCTCCGCAGACGGGGCTGCAAAGCTGCAACTAATGGTGTTGGCCTCCCTGCCCACCTGTGGAAGCAACTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS TCA 90 bp GGGCTGCTGCTGAAGGGCACTGGCATCGATCACCTTCCCAGCCACTaGAGCATTGGCATCTGCCTGCTTCACACTCTCCATGCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: GLLLKGTGIDHLPSH*SIGICLLHTLHAQH
Trigger: GTGCTGGGCATGGAGAGTGTGAAGCAGGCAGATGCCAATGCTTCAGTGGCTGGGAAGGTGATCGATGCCAGTGCCCTTCAGCAGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS GCA 90 bp CACGTGCCTCTTCCACTGCACACTTGGCCCTTTGAATTGACACAGTaGTGGGCTGCTGCTGAAGGGCACTGGCATCGATCACCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: HVPLPLHTWPFELTQ*WAAAEGHWHRSPSQ
Trigger: CTGGGAAGGTGATCGATGCCAGTGCCCTTCAGCAGCAGCCCAGCACTGTGTCAATTCAAAGGGCCAAGTGTGCAGTGGAAGAGGCACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS CCA 90 bp GTGCCTCTTCCACTGCACACTTGGCCCTTTGAATTGACACAGTGCTaGGCTGCTGCTGAAGGGCACTGGCATCGATCACCTTCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: VPLPLHTWPFELTQC*AAAEGHWHRSPSQP
Trigger: TGGCTGGGAAGGTGATCGATGCCAGTGCCCTTCAGCAGCAGCCCAGCACTGTGTCAATTCAAAGGGCCAAGTGTGCAGTGGAAGAGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS TCA 90 bp AGATGCACATCTATTGTCTTCACCTTGGCCCAGTCCAAGAACAAGTaGAAACACCCAGGCTGCCCAGAGGAACGAGGCGGGACCTCGCCG +
Preference number: 5 (lower is better)
Translates to: RCTSIVFTLAQSKNK*KHPGCPEERGGTSP
Trigger: CGGCGAGGTCCCGCCTCGTTCCTCTGGGCAGCCTGGGTGTTTTCACTTGTTCTTGGACTGGGCCAAGGTGAAGACAATAGATGTGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000478974.1
CDS-3UTR CAA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTGGGGGCTGCGTGCCCTaGTCCTTTTCGCCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTGGCVP*SFSPQC
Trigger: GCACTGAGGCGAAAAGGACAAGGGCACGCAGCCCCC...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS CCA 90 bp GCTGAAGGGCACTGGCATCGATCACCTTCCCAGCCACTGAAGCATTaGCATCTGCCTGCTTCACACTCTCCATGCCCAGCACACAGATTT +
Preference number: 5 (lower is better)
Translates to: AEGHWHRSPSQPLKH*HLPASHSPCPAHRF
Trigger: AAATCTGTGTGCTGGGCATGGAGAGTGTGAAGCAGGCAGATGCCAATGCTTCAGTGGCTGGGAAGGTGATCGATGCCAGTGCCCTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CAA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACGGGGGCTGCGTGCCCTaGTCCTTTTCGCCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDGGCVP*SFSPQC
Trigger: GCACTGAGGCGAAAAGGACAAGGGCACGCAGCCCCC...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CAA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGAGTCCAGAGCCCGAGTaGCTGGCGCGCTCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWSPEPE*LARSGV
Trigger: CACCCCAGAGCGCGCCAGCAACTCGGGCTCTGGACT...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS-3UTR CAA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCCATTAGTTGCAGCTTaGCAGCCCCGTCTGCGGAGC +
Preference number: 5 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWPLVAA*QPRLRS
Trigger: GCTCCGCAGACGGGGCTGCAAAGCTGCAACTAATGG...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CAA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTCCAGCCACTGAAGCATaGGCATCTGCCTGCTTCACA +
Preference number: 5 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTPATEA*ASACFT
Trigger: TGTGAAGCAGGCAGATGCCAATGCTTCAGTGGCTGG...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS TCA 90 bp GCCTGCAGGGAGTGGACAGCTCCTGTTAATGGCATGGATAGTGGCTaGGTCCTAAAACTGGCTGCTTCCCCTGAGGTTATGTTATTAATG +
Preference number: 5 (lower is better)
Translates to: ACREWTAPVNGMDSG*VLKLAASPEVMLLM
Trigger: CATTAATAACATAACCTCAGGGGAAGCAGCCAGTTTTAGGACTCAGCCACTATCCATGCCATTAACAGGAGCTGTCCACTCCCTGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS GCA 90 bp GGAAAAATGCACACCCACATACTTCATCATTGCTCGTCACGTTTCTaGATCCTTCCATGCCTGGCTTTCTGGACCCATCTGGACAGATGG +
Preference number: 5 (lower is better)
Translates to: GKMHTHILHHCSSRF*ILPCLAFWTHLDRW
Trigger: CCATCTGTCCAGATGGGTCCAGAAAGCCAGGCATGGAAGGATGCAGAAACGTGACGAGCAATGATGAAGTATGTGGGTGTGCATTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478974.1
CDS TCA 90 bp AGTATAACTATGCTCCGAGCCTACGCTCTGAACTCTCACTACGCATaGCACTCTGCATCAGACACAACAGGTAGGAGAGGAAGGGAATTC +
Preference number: 5 (lower is better)
Translates to: SITMLRAYALNSHYA*HSASDTTGRRGREF
Trigger: GAATTCCCTTCCTCTCCTACCTGTTGTGTCTGATGCAGAGTGTCATGCGTAGTGAGAGTTCAGAGCGTAGGCTCGGAGCATAGTTATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS GCA 90 bp TCAGATGACAGTTTCCGTCATTGGGCACCACTATGCCTGCCAATTTaGTATCAAGAGCGAGATGAGACGTCTGATCTGTCATCACCAGCA +
Preference number: 5 (lower is better)
Translates to: SDDSFRHWAPLCLPI*YQERDETSDLSSPA
Trigger: TGCTGGTGATGACAGATCAGACGTCTCATCTCGCTCTTGATAGCAAATTGGCAGGCATAGTGGTGCCCAATGACGGAAACTGTCATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222573.5
ENST00000477859.1
ENST00000478974.1
ENST00000537992.5
CDS CCA 90 bp CGTCACGTTTCTGCATCCTTCCATGCCTGGCTTTCTGGACCCATCTaGACAGATGGCGGTAATGTTAAAATAGATGCCTTGTACCTGGTT +
Preference number: 5 (lower is better)
Translates to: RHVSASFHAWLSGPI*TDGGNVKIDALYLV
Trigger: AACCAGGTACAAGGCATCTATTTTAACATTACCGCCATCTGTCCAGATGGGTCCAGAAAGCCAGGCATGGAAGGATGCAGAAACGTGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS-3UTR CAA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTAACTCTCTCACAGCATaGTTCTCTCTGGGAAGCGTA +
Preference number: 5 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPNSLTA*FSLGSV
Trigger: TACGCTTCCCAGAGAGAACAATGCTGTGAGAGAGTT...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS GCA 90 bp GATGGGATCGGACCCAGAAACTCTGAAGTTGTCCTCTCTATGACATaGCTGGCTTCACGGGTTCTGATGAACCACTTTCTAGTTCATGAA +
Preference number: 5 (lower is better)
Translates to: DGIGPRNSEVVLSMT*LASRVLMNHFLVHE
Trigger: TTCATGAACTAGAAAGTGGTTCATCAGAACCCGTGAAGCCAGGCATGTCATAGAGAGGACAACTTCAGAGTTTCTGGGTCCGATCCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS CCA 90 bp GGGGTCCCTCTGAAGCCTGATGTTCTATGGCTAACATGTTACATGTaGCTGACAACTGGGCTTCTGTACTATCTTTTGAAGGCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: GVPLKPDVLWLTCYM*LTTGLLYYLLKALP
Trigger: TGGAAGAGCCTTCAAAAGATAGTACAGAAGCCCAGTTGTCAGCCACATGTAACATGTTAGCCATAGAACATCAGGCTTCAGAGGGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS-3UTR CAA 90 bp GATGGGGTTAGTCTTCATCAAAATGCAGTATCTAGTACTTTAACTCAAGTGCTGCCATTAGTTGCAGCTTaGCAGCCCCGTCTGCGGAGC +
Preference number: 5 (lower is better)
Translates to: DGVSLHQNAVSSTLTQVLPLVAA*QPRLRS
Trigger: GCTCCGCAGACGGGGCTGCAAAGCTGCAACTAATGG...CAGCACTTGAGTTAAAGTACTAGATACTGCATTTTGATGAAGACTAACCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTACCTCGCCGGTCGTTTaGCAGGCAGACAAATGCAGC +
Preference number: 5 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSTSPVV*QADKCS
Trigger: GCTGCATTTGTCTGCCTGCAAAACGACCGGCGAGGT...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTATGACCGTGAGCAATTaGTCTCCTCCTGTGACTTTT +
Preference number: 5 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPMTVSN*SPPVTF
Trigger: AAAAGTCACAGGAGGAGACAAATTGCTCACGGTCAT...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CAA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTACCCTAATTGCGCCATaGCACTTCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRTLIAP*HFSLGD
Trigger: GTCACCCAGGCTGAAGTGCAATGGCGCAATTAGGGT...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTTTGTGCGTGACTCAGTaGTCCTTAAATTTCGCCTTC +
Preference number: 5 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTLCVTQ*SLNFAF
Trigger: GAAGGCGAAATTTAAGGACAACTGAGTCACGCACAA...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCACTCAGGGCAGAGAGTaGCTAGGAAACCTCCCCACG +
Preference number: 5 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLITQGRE*LGNLPT
Trigger: CGTGGGGAGGTTTCCTAGCAACTCTCTGCCCTGAGT...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS-3UTR CAA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGAAGATGCACATCTATaGTCTTCTGGCCGGGATGCT +
Preference number: 5 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHEDAHL*SSGRDA
Trigger: AGCATCCCGGCCAGAAGACAATAGATGTGCATCTTC...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS GCA 90 bp AGACGTTGTTTTTCAGATGACAGTTTCCGTCATTGGGCACCACTATaGCTGCCAATTTGCTATCAAGAGCGAGATGAGACGTCTGATCTG +
Preference number: 5 (lower is better)
Translates to: RRCFSDDSFRHWAPL*LPICYQERDETSDL
Trigger: CAGATCAGACGTCTCATCTCGCTCTTGATAGCAAATTGGCAGGCATAGTGGTGCCCAATGACGGAAACTGTCATCTGAAAAACAACGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222573.5
ENST00000477859.1
ENST00000478974.1
ENST00000537992.5
CDS CCA 90 bp CTTTTCGCCATCCGATATGACTTTCACAGACAGCTGCCTGAAGCATaGCGTCAAAACCTCCTTCTGGTGTATCTATGTTTCCAGAGATCT +
Preference number: 5 (lower is better)
Translates to: LFAIRYDFHRQLPEA*RQNLLLVYLCFQRS
Trigger: AGATCTCTGGAAACATAGATACACCAGAAGGAGGTTTTGACGCCATGCTTCAGGCAGCTGTCTGTGAAAGTCATATCGGATGGCGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS-3UTR CAA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTATATTCTCAAGTAGCTaGGGCTGGAGAAACATTCTG +
Preference number: 5 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTIFSSS*GWRNIL
Trigger: CAGAATGTTTCTCCAGCCCAAGCTACTTGAGAATAT...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CAA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTGCTTTAGGAAATCTCTaGGGAAGAGTGAGTGGAAAA +
Preference number: 5 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPALGNL*GRVSGK
Trigger: TTTTCCACTCACTCTTCCCAAGAGATTTCCTAAAGC...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS TCA 90 bp CAAACACTCGATCATGTGAAACGTCTTACTTCACAGACAGCTGCCTaGAGCATGGCGTCAAAACCTCCTTCTGGTGTATCTATGTTTCCA +
Preference number: 5 (lower is better)
Translates to: QTLDHVKRLTSQTAA*SMASKPPSGVSMFP
Trigger: TGGAAACATAGATACACCAGAAGGAGGTTTTGACGCCATGCTTCAGGCAGCTGTCTGTGAAGTAAGACGTTTCACATGATCGAGTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS CCA 90 bp TCGGCTCCTGGACGCAGCTGGATAGACACTTCTCCTGGTGTCACCTaGGTATTAATTTCATTTTCAGTGGGTATTATAACATGCACAGAT +
Preference number: 5 (lower is better)
Translates to: SAPGRSWIDTSPGVT*VLISFSVGIITCTD
Trigger: ATCTGTGCATGTTATAATACCCACTGAAAATGAAATTAATACCCAGGTGACACCAGGAGAAGTGTCTATCCAGCTGCGTCCAGGAGCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222573.5
ENST00000477859.1
ENST00000478974.1
ENST00000537992.5
CDS CCA 90 bp AGAAGAACCATTGTGAAGCCACTAATGACACCCATGGTGTTGAAATaGGCCATCACAAGAAGCCCAGTCAGATGGGATCATACTAGAACT +
Preference number: 5 (lower is better)
Translates to: RRTIVKPLMTPMVLK*AITRSPVRWDHTRT
Trigger: AGTTCTAGTATGATCCCATCTGACTGGGCTTCTTGTGATGGCCCATTTCAACACCATGGGTGTCATTAGTGGCTTCACAATGGTTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460204.1
CDS-3UTR CAA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCAGATGGGTATTCTATaGAATCAACTGAGCAGCCTT +
Preference number: 5 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDQMGIL*NQLSSL
Trigger: AAGGCTGCTCAGTTGATTCAATAGAATACCCATCTG...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CAA 90 bp CCTTTGAGTCTAATCTACTCTACCAGGTTCCAGGAAGAATATAATTCTACAGAGCCAGCCACTGAAGCATaGGCATCTGCCTGCTTCACA +
Preference number: 5 (lower is better)
Translates to: PLSLIYSTRFQEEYNSTEPATEA*ASACFT
Trigger: TGTGAAGCAGGCAGATGCCAATGCTTCAGTGGCTGG...CTCTGTAGAATTATATTCTTCCTGGAACCTGGTAGAGTAGATTAGACTCAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATATGACCGTGAGCAATTaGTCTCCTCCTGTGACTTTT +
Preference number: 5 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHMTVSN*SPPVTF
Trigger: AAAAGTCACAGGAGGAGACAAATTGCTCACGGTCAT...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CAA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACTTCAACCACCAACTGTaGAAGTGTTTGGCAACCTTA +
Preference number: 5 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDFNHQL*KCLATL
Trigger: TAAGGTTGCCAAACACTTCAACAGTTGGTGGTTGAA...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGAGAGGTAGCATGATATaGTGCAATGAACACTGGCCT +
Preference number: 5 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWRGSMI*CNEHWP
Trigger: AGGCCAGTGTTCATTGCACAATATCATGCTACCTCT...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATTCGTCTAACACTGAGTaGCCTACAAGGAAGTTTGTC +
Preference number: 5 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHSSNTE*PTRKFV
Trigger: GACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGA...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTTCATTCTTTGAAGGATaGCATCTCATGCATCCACAA +
Preference number: 5 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTSFFEG*HLMHPQ
Trigger: TTGTGGATGCATGAGATGCAATCCTTCAAAGAATGA...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCTGAAGTGCCAACAGTaGCAAGAAATGTCACAATTT +
Preference number: 5 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPLKCQQ*QEMSQF
Trigger: AAATTGTGACATTTCTTGCAACTGTTGGCACTTCAG...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTAGGCTCCATGTTGAGTaGTGCGTGACTCAGTTGTCC +
Preference number: 5 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSRLHVE*CVTQLS
Trigger: GGACAACTGAGTCACGCACAACTCAACATGGAGCCT...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS TCA 90 bp CCTGAAAGGGGCACTGTTAATTGTACCGGTGCAAGACGTGTAAACTaGAACTCCTCAGGAAAACTGAAGTCTAAGGTTACCCTAAACACA +
Preference number: 5 (lower is better)
Translates to: PERGTVNCTGARRVN*NSSGKLKSKVTLNT
Trigger: TGTGTTTAGGGTAACCTTAGACTTCAGTTTTCCTGAGGAGTTTCAGTTTACACGTCTTGCACCGGTACAATTAACAGTGCCCCTTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460204.1
CDS TCA 90 bp GATTCCTCCTGTACATTCACCTCAAGAAGGCTTATGAAACTCCATTaGTGGATGCATCAATCCTGTTCCGGTACAACAGATGACAGAGCT +
Preference number: 5 (lower is better)
Translates to: DSSCTFTSRRLMKLH*WMHQSCSGTTDDRA
Trigger: AGCTCTGTCATCTGTTGTACCGGAACAGGATTGATGCATCCATCAATGGAGTTTCATAAGCCTTCTTGAGGTGAATGTACAGGAGGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS GCA 90 bp TTAGCAAACACTCGATCATGTGAAACGTCTTACTTCACAGACAGCTaGCTGAAGCATGGCGTCAAAACCTCCTTCTGGTGTATCTATGTT +
Preference number: 5 (lower is better)
Translates to: LANTRSCETSYFTDS*LKHGVKTSFWCIYV
Trigger: AACATAGATACACCAGAAGGAGGTTTTGACGCCATGCTTCAGGCAGCTGTCTGTGAAGTAAGACGTTTCACATGATCGAGTGTTTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS CCA 90 bp ACTTTCACAGACAGCTGCCTGAAGCATGGCGTCAAAACCTCCTTCTaGTGTATCTATGTTTCCAGAGATCTTCTGTCTATGAACTGCTTT +
Preference number: 5 (lower is better)
Translates to: TFTDSCLKHGVKTSF*CIYVSRDLLSMNCF
Trigger: AAAGCAGTTCATAGACAGAAGATCTCTGGAAACATAGATACACCAGAAGGAGGTTTTGACGCCATGCTTCAGGCAGCTGTCTGTGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS CCA 90 bp TACTTCACAGACAGCTGCCTGAAGCATGGCGTCAAAACCTCCTTCTaGTGTATCTATGTTTCCAGAGATCTTCTGTCTATGAACTGCTTT +
Preference number: 5 (lower is better)
Translates to: YFTDSCLKHGVKTSF*CIYVSRDLLSMNCF
Trigger: AAAGCAGTTCATAGACAGAAGATCTCTGGAAACATAGATACACCAGAAGGAGGTTTTGACGCCATGCTTCAGGCAGCTGTCTGTGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS-3UTR CAA 90 bp AGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTCCTGTGACTTCACACTGGAAACACTaGGAATCTAGAAAAGTTTCA +
Preference number: 5 (lower is better)
Translates to: SVQPATGMTVSNLSPPVTSHWKH*ESRKVS
Trigger: TGAAACTTTTCTAGATTCCAAGTGTTTCCAGTGTGA...AGTCACAGGAGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CAA 90 bp CTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCGTGAGCAATTTGTCTCCTGAAGCTATTCAGGTTTaGATGATACTTTACAGTGTC +
Preference number: 5 (lower is better)
Translates to: LRSSVQPATGMTVSNLSPEAIQV*MILYSV
Trigger: GACACTGTAAAGTATCATCAAAACCTGAATAGCTTC...AGGAGACAAATTGCTCACGGTCATGCCAGTTGCTGGTTGTACACTCGAACGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACTACAAAACTCCACACTaGTGCACAATGAAGCTATTC +
Preference number: 5 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDYKTPH*CTMKLF
Trigger: GAATAGCTTCATTGTGCACAAGTGTGGAGTTTTGTA...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCCTGAGGTCAGGAGTTaGAGATCAACCTGTCCAACA +
Preference number: 5 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSPEVRS*RSTCPT
Trigger: TGTTGGACAGGTTGATCTCAAACTCCTGACCTCAGG...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS CCA 90 bp AAAATTAGCTTCGGCTCCTGGACGCAGCTGGATAGACACTTCTCCTaGTGTCACCTGGGTATTAATTTCATTTTCAGTGGGTATTATAAC +
Preference number: 5 (lower is better)
Translates to: KISFGSWTQLDRHFS*CHLGINFIFSGYYN
Trigger: GTTATAATACCCACTGAAAATGAAATTAATACCCAGGTGACACCAGGAGAAGTGTCTATCCAGCTGCGTCCAGGAGCCGAAGCTAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222573.5
ENST00000477859.1
ENST00000478974.1
ENST00000537992.5
CDS CCA 90 bp TGTACATCCTCTATTTTCCCACAGCCATGTGACCACACTAGTTCCTaGCTAGAGATTTCTAGTGTTCCACTGGAGGAAGAACAATATAGA +
Preference number: 5 (lower is better)
Translates to: CTSSIFPQPCDHTSS*LEISSVPLEEEQYR
Trigger: TCTATATTGTTCTTCCTCCAGTGGAACACTAGAAATCTCTAGCCAGGAACTAGTGTGGTCACATGGCTGTGGGAAAATAGAGGATGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS-3UTR CAA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTGAAGATGCACATCTATaGTCTTCACCTTGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSEDAHL*SSPWPS
Trigger: ACTGGGCCAAGGTGAAGACAATAGATGTGCATCTTC...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATATTGTAGTCACTGCATaGATTATGAATCCTTTCGGG +
Preference number: 5 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHIVVTA*IMNPFG
Trigger: CCCGAAAGGATTCATAATCAATGCAGTGACTACAAT...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CAA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTGTGAGGGTGAAGGCATaGCATACAATTCCAGTTTTC +
Preference number: 5 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRVRVKA*HTIPVF
Trigger: GAAAACTGGAATTGTATGCAATGCCTTCACCCTCAC...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CAA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACTCAACTTATCCTTTTTaGAGGCTGACACTCTGTAAT +
Preference number: 5 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDSTYPF*RLTLCN
Trigger: ATTACAGAGTGTCAGCCTCAAAAAAGGATAAGTTGA...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CAA 90 bp GATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATGACCATACCTACCCATTCTaGTTAGTTAAGTTAGGGTTT +
Preference number: 5 (lower is better)
Translates to: DEDTCQSSFECTTSNWHDHTYPF*LVKLGF
Trigger: AAACCCTAACTTAACTAACAAGAATGGGTAGGTATG...GTCATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp GATGGGGTTAGTCTTCATCAAAATGCAGTATCTAGTACTTTAACTCAAGTGCTGTCTATTGTCTTCACCTaGGCCCAGTCCAAGAACAAG +
Preference number: 5 (lower is better)
Translates to: DGVSLHQNAVSSTLTQVLSIVFT*AQSKNK
Trigger: CTTGTTCTTGGACTGGGCCAAGGTGAAGACAATAGA...CAGCACTTGAGTTAAAGTACTAGATACTGCATTTTGATGAAGACTAACCCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp CATCATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGTCAACTTATCCTTTTTaGAGGCTGACACTCTGTAAT +
Preference number: 5 (lower is better)
Translates to: HHDEDTCQSSFECTTSNWSTYPF*RLTLCN
Trigger: ATTACAGAGTGTCAGCCTCAAAAAAGGATAAGTTGA...CCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CAA 90 bp CATGATGAGGATACTTGTCAGTCTTCGTTCGAGTGTACAACCAGCAACTGGCATTCTTGTGCAAACACTTaGCAGAATCAACTTATCCTT +
Preference number: 5 (lower is better)
Translates to: HDEDTCQSSFECTTSNWHSCANT*QNQLIL
Trigger: AAGGATAAGTTGATTCTGCAAAGTGTTTGCACAAGA...ATGCCAGTTGCTGGTTGTACACTCGAACGAAGACTGACAAGTATCCTCATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CAA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTTTTTCTTTTGGAGGGTaGTCAGGCATCCATCCATTT +
Preference number: 5 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRFSFGG*SGIHPF
Trigger: AAATGGATGGATGCCTGACAACCCTCCAAAAGAAAA...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCTGCCTACAAGGAAGTTaGTCCCTTCCTATGGTAACA +
Preference number: 5 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLICLQGS*SLPMVT
Trigger: TGTTACCATAGGAAGGGACAAACTTCCTTGTAGGCA...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTTCTCAGTGGTCTGCATaGCATAAAATGGAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRSQWSA*HKMEFL
Trigger: CAAGAACTCCATTTTATGCAATGCAGACCACTGAGA...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS TCA 90 bp AAAGTAAGAATGATTCCTCCTGTACATTCACCTCAAGAAGGCTTATaGAACTCCATTGATGGATGCATCAATCCTGTTCCGGTACAACAG +
Preference number: 5 (lower is better)
Translates to: KVRMIPPVHSPQEGL*NSIDGCINPVPVQQ
Trigger: CTGTTGTACCGGAACAGGATTGATGCATCCATCAATGGAGTTTCATAAGCCTTCTTGAGGTGAATGTACAGGAGGAATCATTCTTACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS-3UTR CAA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCACAGGATGCTGCATTaGAAGATGCACATCTATTGT +
Preference number: 5 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSHRMLH*KMHIYC
Trigger: ACAATAGATGTGCATCTTCAAATGCAGCATCCTGTG...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CAA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTTCCACTACCAAATTATaGAGGTTTGCAGCCTTTGAT +
Preference number: 5 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRSTTKL*RFAAFD
Trigger: ATCAAAGGCTGCAAACCTCAATAATTTGGTAGTGGA...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CAA 90 bp GATGGGGTTAGTCTTCATCAAAATGCAGTATCTAGTACTTTAACTCAAGTGCTGGTGAGGGTGAAGGCATaGCATACAATTCCAGTTTTC +
Preference number: 5 (lower is better)
Translates to: DGVSLHQNAVSSTLTQVLVRVKA*HTIPVF
Trigger: GAAAACTGGAATTGTATGCAATGCCTTCACCCTCAC...CAGCACTTGAGTTAAAGTACTAGATACTGCATTTTGATGAAGACTAACCCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTATATTCTCAAGTAGCTaGGGCTGGAGAAACATTCTG +
Preference number: 5 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSIFSSS*GWRNIL
Trigger: CAGAATGTTTCTCCAGCCCAAGCTACTTGAGAATAT...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CAA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCCAGTTCAAGTTAGCATaGAAAGTGCTTGGCTGTAGA +
Preference number: 5 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLIQFKLA*KVLGCR
Trigger: TCTACAGCCAAGCACTTTCAATGCTAACTTGAACTG...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTATGTCAATCTCTCATTaGAGGAAGGAAATGCAGTTC +
Preference number: 5 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRMSISH*RKEMQF
Trigger: GAACTGCATTTCCTTCCTCAAATGAGAGATTGACAT...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp TATAAATGGGGACCTGAAAGAGCTTTTGTAAACTCAAGATATGCGGGATCTGAGCCTATGGTAACAGCCTaGGTCCACTATAAAGTTAGT +
Preference number: 5 (lower is better)
Translates to: YKWGPERAFVNSRYAGSEPMVTA*VHYKVS
Trigger: ACTAACTTTATAGTGGACCAAGGCTGTTACCATAGG...CTCAGATCCCGCATATCTTGAGTTTACAAAAGCTCTTTCAGGTCCCCATTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp AAGCATAACCACAATCATCGTCTAACACTGAGTTGCCTACAAGGAAGTTTGTCCAGGAAGAAAAAGCCTTaGAGTCTAATCTACTCTACC +
Preference number: 5 (lower is better)
Translates to: KHNHNHRLTLSCLQGSLSRKKKP*SLIYST
Trigger: GGTAGAGTAGATTAGACTCAAAGGCTTTTTCTTCCT...GGACAAACTTCCTTGTAGGCAACTCAGTGTTAGACGATGATTGTGGTTATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp TATAAATGGGGACCTGAAAGAGCTTTTGTAAACTCAAGATATGCGGGATCTGAGATTGTAGTCACTGCATaGATTATGAATCCTTTCGGG +
Preference number: 5 (lower is better)
Translates to: YKWGPERAFVNSRYAGSEIVVTA*IMNPFG
Trigger: CCCGAAAGGATTCATAATCAATGCAGTGACTACAAT...CTCAGATCCCGCATATCTTGAGTTTACAAAAGCTCTTTCAGGTCCCCATTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp TCTGAAAAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTTCCACTACCAAATTATaGAGGTTTGCAGCCTTTGAT +
Preference number: 5 (lower is better)
Translates to: SEKVSSYVSHIMMRILVSSTTKL*RFAAFD
Trigger: ATCAAAGGCTGCAAACCTCAATAATTTGGTAGTGGA...ACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTTTTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CAA 90 bp AAAGTCAGCAGCTATGTGAGTCACATCATGATGAGGATACTTGTCAGTCTTCGTTCTTGTGCAAACACTTaGCAGAATCAACTTATCCTT +
Preference number: 5 (lower is better)
Translates to: KVSSYVSHIMMRILVSLRSCANT*QNQLIL
Trigger: AAGGATAAGTTGATTCTGCAAAGTGTTTGCACAAGA...ACGAAGACTGACAAGTATCCTCATCATGATGTGACTCACATAGCTGCTGACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS-3UTR CAA 90 bp CCTTTGAGTCTAATCTACTCTACCAGGTTCCAGGAAGAATATAATTCTACAGAGGTAAATAAATTTCCATaGGGGAAGACAGGGCTCATG +
Preference number: 5 (lower is better)
Translates to: PLSLIYSTRFQEEYNSTEVNKFP*GKTGLM
Trigger: CATGAGCCCTGTCTTCCCCAATGGAAATTTATTTAC...CTCTGTAGAATTATATTCTTCCTGGAACCTGGTAGAGTAGATTAGACTCAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp GTACCTGTAAAGTGTAATCAGTGCTCTTCAGAGGATCTACATTCTATGCTGATCTGGCTGACTCTTGTCTaGCATAAAGATATCTTCAGT +
Preference number: 5 (lower is better)
Translates to: VPVKCNQCSSEDLHSMLIWLTLV*HKDIFS
Trigger: ACTGAAGATATCTTTATGCAAGACAAGAGTCAGCCA...GATCAGCATAGAATGTAGATCCTCTGAAGAGCACTGATTACACTTTACAGGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp GAAAGAGTGAAACACGAATCATTTATTCATCTAGCTGTTCTTGTCTATTCAACCTTAATGGGTCTGTCTTaGTTCAGGGGCAAAGACTCA +
Preference number: 5 (lower is better)
Translates to: ERVKHESFIHLAVLVYSTLMGLS*FRGKDS
Trigger: TGAGTCTTTGCCCCTGAACAAAGACAGACCCATTAA...GGTTGAATAGACAAGAACAGCTAGATGAATAAATGATTCGTGTTTCACTCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp GAAAGAGTGAAACACGAATCATTTATTCATCTAGCTGTTCTTGTCTATTCAACCCACAGGATGCTGCATTaGAAGATGCACATCTATTGT +
Preference number: 5 (lower is better)
Translates to: ERVKHESFIHLAVLVYSTHRMLH*KMHIYC
Trigger: ACAATAGATGTGCATCTTCAAATGCAGCATCCTGTG...GGTTGAATAGACAAGAACAGCTAGATGAATAAATGATTCGTGTTTCACTCTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp GATGGGGTTAGTCTTCATCAAAATGCAGTATCTAGTACTTTAACTCAAGTGCTGTCACACTGGAAACACTaGGAATCTAGAAAAGTTTCA +
Preference number: 5 (lower is better)
Translates to: DGVSLHQNAVSSTLTQVLSHWKH*ESRKVS
Trigger: TGAAACTTTTCTAGATTCCAAGTGTTTCCAGTGTGA...CAGCACTTGAGTTAAAGTACTAGATACTGCATTTTGATGAAGACTAACCCCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp GATGGGGTTAGTCTTCATCAAAATGCAGTATCTAGTACTTTAACTCAAGTGCTGCAACTGTTGAAGTGTTaGGCAACCTTAGAATATACT +
Preference number: 5 (lower is better)
Translates to: DGVSLHQNAVSSTLTQVLQLLKC*ATLEYT
Trigger: AGTATATTCTAAGGTTGCCAAACACTTCAACAGTTG...CAGCACTTGAGTTAAAGTACTAGATACTGCATTTTGATGAAGACTAACCCCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp GAAAGAGTGAAACACGAATCATTTATTCATCTAGCTGTTCTTGTCTATTCAACCGAGCTGCTGTGTTTATaGGCTCCAGAACAACTTATT +
Preference number: 5 (lower is better)
Translates to: ERVKHESFIHLAVLVYSTELLCL*APEQLI
Trigger: AATAAGTTGTTCTGGAGCCAATAAACACAGCAGCTC...GGTTGAATAGACAAGAACAGCTAGATGAATAAATGATTCGTGTTTCACTCTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp CCTTTGAGTCTAATCTACTCTACCAGGTTCCAGGAAGAATATAATTCTACAGAGGTACCATACTTGTCATaGCGTAGACTTCTTATCAAA +
Preference number: 5 (lower is better)
Translates to: PLSLIYSTRFQEEYNSTEVPYLS*RRLLIK
Trigger: TTTGATAAGAAGTCTACGCAATGACAAGTATGGTAC...CTCTGTAGAATTATATTCTTCCTGGAACCTGGTAGAGTAGATTAGACTCAAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS TCA 90 bp AAGCAATCAAATTCTCATCTTTTGACCCACTTTCTTTGTGATAACTaGGATTTCTTTGTAGTCACATCGGAGACAACATCATTATCCCCA +
Preference number: 5 (lower is better)
Translates to: KQSNSHLLTHFLCDN*DFFVVTSETTSLSP
Trigger: TGGGGATAATGATGTTGTCTCCGATGTGACTACAAAGAAATCTCAGTTATCACAAAGAAAGTGGGTCAAAAGATGAGAATTTGATTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS-3UTR CAA 90 bp GAAAGAGTGAAACACGAATCATTTATTCATCTAGCTGTTCTTGTCTATTCAACCTCAAAATGTGGTACTTaGCTTGAGGCAGAATTTCTA +
Preference number: 5 (lower is better)
Translates to: ERVKHESFIHLAVLVYSTSKCGT*LEAEFL
Trigger: TAGAAATTCTGCCTCAAGCAAAGTACCACATTTTGA...GGTTGAATAGACAAGAACAGCTAGATGAATAAATGATTCGTGTTTCACTCTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS-3UTR CAA 90 bp ATAACAGAATGCAATCTGCACATGATTGAGCTCCCATGTAACTATATTTCACTTTTGAGTTTTGGAAAATaGCCTCCAGAGATATCTACT +
Preference number: 5 (lower is better)
Translates to: ITECNLHMIELPCNYISLLSFGK*PPEIST
Trigger: AGTAGATATCTCTGGAGGCAATTTTCCAAAACTCAA...AAGTGAAATATAGTTACATGGGAGCTCAATCATGTGCAGATTGCATTCTGTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222573.5
CDS GCA 72 bp GCGCGGCTCAGGCGTCCCGCAGTCCAGAGCCCGAGTTaGTGGCGCGCTCTGGGGTGCACACGGCTAGGATGC +
Preference number: 6 (lower is better)
Translates to: ARLRRPAVQSPS*WRALGCTRLGC
Trigger: GCATCCTAGCCGTGTGCACCCCAGAGCGCGCCAGCAACTCGGGCTCTGGACTGCGGGACGCCTGAGCCGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS CCA 72 bp GCACCTCCTTCGACGGCCAAGGGCCCCGGCGGCGACTaGAGAGAGGGCTCTGCAAGGGCTCCGCAGCCTGCT +
Preference number: 6 (lower is better)
Translates to: APPSTAKGPGGD*REGSARAPQPA
Trigger: AGCAGGCTGCGGAGCCCTTGCAGAGCCCTCTCTCCAGTCGCCGCCGGGGCCCTTGGCCGTCGAAGGAGGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000478974.1
CDS CCA 72 bp GAAGCTCGGGATGCCAGCAACAGGGGGAGGCGGCTCTaGGAGCGCCCTAGAAGCACCCGCCGACACCCGCAG +
Preference number: 6 (lower is better)
Translates to: EARDASNRGRRL*ERPRSTRRHPQ
Trigger: CTGCGGGTGTCGGCGGGTGCTTCTAGGGCGCTCCCAGAGCCGCCTCCCCCTGTTGCTGGCATCCCGAGCTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS CCA 72 bp CGGCTCAGGCGTCCCGCAGTCCAGAGCCCGAGTTGCTaGCGCGCTCTGGGGTGCACACGGCTAGGATGCGAG +
Preference number: 6 (lower is better)
Translates to: RLRRPAVQSPSC*RALGCTRLGCE
Trigger: CTCGCATCCTAGCCGTGTGCACCCCAGAGCGCGCCAGCAACTCGGGCTCTGGACTGCGGGACGCCTGAGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS CCA 72 bp AGACCTCCTTCGACGGCCAAGGGCCCCGGCGGCGACTaGAGAGAGGGCTCTGCAAGGGCTCCGCAGCCTGCT +
Preference number: 6 (lower is better)
Translates to: RPPSTAKGPGGD*REGSARAPQPA
Trigger: AGCAGGCTGCGGAGCCCTTGCAGAGCCCTCTCTCCAGTCGCCGCCGGGGCCCTTGGCCGTCGAAGGAGGTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS CAA 90 bp GGGGCTCCAGACCTGCGGGTAGCCGGGTGCACTCAGGGCAGAGAGTaGCTAGGAAACCTCCCCACGCTACCGGAGCGCCTCGCCTCGGCT +
Preference number: 6 (lower is better)
Translates to: GAPDLRVAGCTQGRE*LGNLPTLPERLASA
Trigger: AGCCGAGGCGAGGCGCTCCGGTAGCGTGGGGAGGTTTCCTAGCAACTCTCTGCCCTGAGTGCACCCGGCTACCCGCAGGTCTGGAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS GCA 72 bp CTTCTGGCCGGGATGCTCTGGCCGGGCAGCTCTTCGTaGCAGCCCAAGACCTCCTTCGACGGCCAAGGGCCC +
Preference number: 6 (lower is better)
Translates to: LLAGMLWPGSSS*QPKTSFDGQGP
Trigger: GGGCCCTTGGCCGTCGAAGGAGGTCTTGGGCTGGCACGAAGAGCTGCCCGGCCAGAGCATCCCGGCCAGAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS CCA 72 bp GAGCAGCGGGCAAAGACAAGTCGGCAGCGTCCTGGCTaGCAAGGGAGGAAGCTCGGGATGCCAGCAACAGGG +
Preference number: 6 (lower is better)
Translates to: EQRAKTSRQRPG*QGRKLGMPATG
Trigger: CCCTGTTGCTGGCATCCCGAGCTTCCTCCCTTGCCAGCCAGGACGCTGCCGACTTGTCTTTGCCCGCTGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS CCA 72 bp TGCGGAGCAGCGGGCAAAGACAAGTCGGCAGCGTCCTaGCTGGCAAGGGAGGAAGCTCGGGATGCCAGCAAC +
Preference number: 6 (lower is better)
Translates to: CGAAGKDKSAAS*LAREEARDASN
Trigger: GTTGCTGGCATCCCGAGCTTCCTCCCTTGCCAGCCAGGACGCTGCCGACTTGTCTTTGCCCGCTGCTCCGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS GCA 72 bp CTTCCACAGGTGGGCAGGGAGGCCAACACCATTAGTTaGAGCTTTGCAGCCCCGTCTGCGGAGCAGCGGGCA +
Preference number: 6 (lower is better)
Translates to: LPQVGREANTIS*SFAAPSAEQRA
Trigger: TGCCCGCTGCTCCGCAGACGGGGCTGCAAAGCTGCAACTAATGGTGTTGGCCTCCCTGCCCACCTGTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS CAA 90 bp TGCTTCCACAGGTGGGCAGGGAGGCCAACACCATTAGTTGCAGCTTaGCAGCCCCGTCTGCGGAGCAGCGGGCAAAGACAAGTCGGCAGC +
Preference number: 6 (lower is better)
Translates to: CFHRWAGRPTPLVAA*QPRLRSSGQRQVGS
Trigger: GCTGCCGACTTGTCTTTGCCCGCTGCTCCGCAGACGGGGCTGCAAAGCTGCAACTAATGGTGTTGGCCTCCCTGCCCACCTGTGGAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS CAA 72 bp AGGTGGGCAGGGAGGCCAACACCATTAGTTGCAGCTTaGCAGCCCCGTCTGCGGAGCAGCGGGCAAAGACAA +
Preference number: 6 (lower is better)
Translates to: RWAGRPTPLVAA*QPRLRSSGQRQ
Trigger: TTGTCTTTGCCCGCTGCTCCGCAGACGGGGCTGCAAAGCTGCAACTAATGGTGTTGGCCTCCCTGCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS CCA 72 bp AAGATGCACATCTATTGTCTTCTGGCCGGGATGCTCTaGCCGGGCAGCTCTTCGTGCCAGCCCAAGACCTCC +
Preference number: 6 (lower is better)
Translates to: KMHIYCLLAGML*PGSSSCQPKTS
Trigger: GGAGGTCTTGGGCTGGCACGAAGAGCTGCCCGGCCAGAGCATCCCGGCCAGAAGACAATAGATGTGCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537992.5
CDS GCA 72 bp CGACTGGAGAGAGGGCTCTGCAAGGGCTCCGCAGCCTaGTCCGGGACAAAGAAAAGAGCTTTTGTTTCTCTC +
Preference number: 6 (lower is better)
Translates to: RLERGLCKGSAA*SGTKKRAFVSL
Trigger: GAGAGAAACAAAAGCTCTTTTCTTTGTCCCGGAGCAGGCTGCGGAGCCCTTGCAGAGCCCTCTCTCCAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS GCA 72 bp TATAACAGGTGGGGCAGTGTTCACAGAAGCGGCCGATaGTCCTGGGATCGGTGCACTCACACCTTCCACACA +
Preference number: 6 (lower is better)
Translates to: YNRWGSVHRSGR*SWDRCTHTFHT
Trigger: TGTGTGGAAGGTGTGAGTGCACCGATCCCAGGAGCATCGGCCGCTTCTGTGAACACTGCCCCACCTGTTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS CCA 72 bp CCACTGCACACTTGGCCCTTTGAATTGACACAGTGCTaGGCTGCTGCTGAAGGGCACTGGCATCGATCACCT +
Preference number: 6 (lower is better)
Translates to: PLHTWPFELTQC*AAAEGHWHRSP
Trigger: AGGTGATCGATGCCAGTGCCCTTCAGCAGCAGCCCAGCACTGTGTCAATTCAAAGGGCCAAGTGTGCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS TCA 72 bp CTGAAGGGCACTGGCATCGATCACCTTCCCAGCCACTaGAGCATTGGCATCTGCCTGCTTCACACTCTCCAT +
Preference number: 6 (lower is better)
Translates to: LKGTGIDHLPSH*SIGICLLHTLH
Trigger: ATGGAGAGTGTGAAGCAGGCAGATGCCAATGCTTCAGTGGCTGGGAAGGTGATCGATGCCAGTGCCCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS GCA 72 bp CTTCATCATTGCTCGTCACGTTTCTGCATCCTTCCATaGCTGGCTTTCTGGACCCATCTGGACAGATGGCGG +
Preference number: 6 (lower is better)
Translates to: LHHCSSRFCILP*LAFWTHLDRWR
Trigger: CCGCCATCTGTCCAGATGGGTCCAGAAAGCCAGGCATGGAAGGATGCAGAAACGTGACGAGCAATGATGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS CCA 72 bp TGCCTCTCCTTCCAGCCTTGCTGGTTGAGGAATCATTaGCATCAGTCACATCCGCACCTAAAGGGTGAGGGA +
Preference number: 6 (lower is better)
Translates to: CLSFQPCWLRNH*HQSHPHLKGEG
Trigger: TCCCTCACCCTTTAGGTGCGGATGTGACTGATGCCAATGATTCCTCAACCAGCAAGGCTGGAAGGAGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS TCA 72 bp ATGCTCCGAGCCTACGCTCTGAACTCTCACTACGCATaGCACTCTGCATCAGACACAACAGGTAGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: MLRAYALNSHYA*HSASDTTGRRG
Trigger: TCCTCTCCTACCTGTTGTGTCTGATGCAGAGTGTCATGCGTAGTGAGAGTTCAGAGCGTAGGCTCGGAGCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS TCA 72 bp TTCCCTAAGATCCCATCTGAAGAATGTTGCCAACAGTaGCAGGTTTTCCTTCTCCCCTCCAGCAGCCACCTC +
Preference number: 6 (lower is better)
Translates to: FPKIPSEECCQQ*QVFLLPSSSHL
Trigger: GAGGTGGCTGCTGGAGGGGAGAAGGAAAACCTGTCACTGTTGGCAACATTCTTCAGATGGGATCTTAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS TCA 72 bp GAGTGGACAGCTCCTGTTAATGGCATGGATAGTGGCTaGGTCCTAAAACTGGCTGCTTCCCCTGAGGTTATG +
Preference number: 6 (lower is better)
Translates to: EWTAPVNGMDSG*VLKLAASPEVM
Trigger: CATAACCTCAGGGGAAGCAGCCAGTTTTAGGACTCAGCCACTATCCATGCCATTAACAGGAGCTGTCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS GCA 72 bp CACACCCACATACTTCATCATTGCTCGTCACGTTTCTaGATCCTTCCATGCCTGGCTTTCTGGACCCATCTG +
Preference number: 6 (lower is better)
Translates to: HTHILHHCSSRF*ILPCLAFWTHL
Trigger: CAGATGGGTCCAGAAAGCCAGGCATGGAAGGATGCAGAAACGTGACGAGCAATGATGAAGTATGTGGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478974.1
CDS CCA 72 bp CAGGGAGAAGGGGTCCCTCTGAAGCCTGATGTTCTATaGCTAACATGTTACATGTGGCTGACAACTGGGCTT +
Preference number: 6 (lower is better)
Translates to: QGEGVPLKPDVL*LTCYMWLTTGL
Trigger: AAGCCCAGTTGTCAGCCACATGTAACATGTTAGCCATAGAACATCAGGCTTCAGAGGGACCCCTTCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS TCA 72 bp AAAGGTGTGACAGGGAGAAGGGGTCCCTCTGAAGCCTaGTGTTCTATGGCTAACATGTTACATGTGGCTGAC +
Preference number: 6 (lower is better)
Translates to: KGVTGRRGPSEA*CSMANMLHVAD
Trigger: GTCAGCCACATGTAACATGTTAGCCATAGAACATCAGGCTTCAGAGGGACCCCTTCTCCCTGTCACACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS GCA 72 bp GAGCTTTTGTTTCTCTCCAGCCGGTGGGGCTTCTGCTaGATAAATCAGCTTAGCGAAGAGCCAAACACAATC +
Preference number: 6 (lower is better)
Translates to: ELLFLSSRWGFC*INQLSEEPNTI
Trigger: GATTGTGTTTGGCTCTTCGCTAAGCTGATTTATGCAGCAGAAGCCCCACCGGCTGGAGAGAAACAAAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS GCA 72 bp AAAGAGCTTTTGTTTCTCTCCAGCCGGTGGGGCTTCTaGTGCATAAATCAGCTTAGCGAAGAGCCAAACACA +
Preference number: 6 (lower is better)
Translates to: KELLFLSSRWGF*CINQLSEEPNT
Trigger: TGTGTTTGGCTCTTCGCTAAGCTGATTTATGCAGCAGAAGCCCCACCGGCTGGAGAGAAACAAAAGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS GCA 72 bp AGTTTCCGTCATTGGGCACCACTATGCCTGCCAATTTaGTATCAAGAGCGAGATGAGACGTCTGATCTGTCA +
Preference number: 6 (lower is better)
Translates to: SFRHWAPLCLPI*YQERDETSDLS
Trigger: TGACAGATCAGACGTCTCATCTCGCTCTTGATAGCAAATTGGCAGGCATAGTGGTGCCCAATGACGGAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222573.5
ENST00000477859.1
ENST00000478974.1
ENST00000537992.5
CDS TCA 72 bp CCACAAACACAAACTCCTCGACCACTGCAAACAGGCTaGTCCTTGTGTGACTTGCAACTCTCAGAAGAAAAC +
Preference number: 6 (lower is better)
Translates to: PQTQTPRPLQTG*SLCDLQLSEEN
Trigger: GTTTTCTTCTGAGAGTTGCAAGTCACACAAGGATCAGCCTGTTTGCAGTGGTCGAGGAGTTTGTGTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS TCA 72 bp CTCTTCCAAACTACCCTCACTAAAGCATTCAGCAGTTaGCAGCAAGTTGGCACAAACTTCAGGGCTCTAAGG +
Preference number: 6 (lower is better)
Translates to: LFQTTLTKAFSS*QQVGTNFRALR
Trigger: CCTTAGAGCCCTGAAGTTTGTGCCAACTTGCTGTCAACTGCTGAATGCTTTAGTGAGGGTAGTTTGGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS TCA 72 bp GATCATGTGAAACGTCTTACTTCACAGACAGCTGCCTaGAGCATGGCGTCAAAACCTCCTTCTGGTGTATCT +
Preference number: 6 (lower is better)
Translates to: DHVKRLTSQTAA*SMASKPPSGVS
Trigger: AGATACACCAGAAGGAGGTTTTGACGCCATGCTTCAGGCAGCTGTCTGTGAAGTAAGACGTTTCACATGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS GCA 72 bp TTTTCAGATGACAGTTTCCGTCATTGGGCACCACTATaGCTGCCAATTTGCTATCAAGAGCGAGATGAGACG +
Preference number: 6 (lower is better)
Translates to: FSDDSFRHWAPL*LPICYQERDET
Trigger: CGTCTCATCTCGCTCTTGATAGCAAATTGGCAGGCATAGTGGTGCCCAATGACGGAAACTGTCATCTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222573.5
ENST00000477859.1
ENST00000478974.1
ENST00000537992.5
CDS CCA 72 bp GACAGCTGCCTGAAGCATGGCGTCAAAACCTCCTTCTaGTGTATCTATGTTTCCAGAGATCTTCTGTCTATG +
Preference number: 6 (lower is better)
Translates to: DSCLKHGVKTSF*CIYVSRDLLSM
Trigger: CATAGACAGAAGATCTCTGGAAACATAGATACACCAGAAGGAGGTTTTGACGCCATGCTTCAGGCAGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222573.5
ENST00000477859.1
ENST00000478974.1
ENST00000537992.5
CDS CCA 72 bp ATTGTGAAGCCACTAATGACACCCATGGTGTTGAAATaGGCCATCACAAGAAGCCCAGTCAGATGGGATCAT +
Preference number: 6 (lower is better)
Translates to: IVKPLMTPMVLK*AITRSPVRWDH
Trigger: ATGATCCCATCTGACTGGGCTTCTTGTGATGGCCCATTTCAACACCATGGGTGTCATTAGTGGCTTCACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460204.1
CDS TCA 72 bp GTTGGCCTAGTGAGGGGTGTTCCATGGTTGTCGATTTaGCATAGACGTTGTTTTTCAGATGACAGTTTCCGT +
Preference number: 6 (lower is better)
Translates to: VGLVRGVPWLSI*HRRCFSDDSFR
Trigger: ACGGAAACTGTCATCTGAAAAACAACGTCTATGTCAAATCGACAACCATGGAACACCCCTCACTAGGCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS GCA 72 bp GGTTTGCAGCCTTTGATTCTATTTCACCAGCAATGGTaGCTGGCAAGAGGGGTAGAAGATCCTTATACCAAT +
Preference number: 6 (lower is better)
Translates to: GLQPLILFHQQW*LARGVEDPYTN
Trigger: ATTGGTATAAGGATCTTCTACCCCTCTTGCCAGGCACCATTGCTGGTGAAATAGAATCAAAGGCTGCAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS GCA 72 bp ATGAACATTTCCCACAAACACAAACTCCTCGACCACTaGAAACAGGCTGATCCTTGTGTGACTTGCAACTCT +
Preference number: 6 (lower is better)
Translates to: MNISHKHKLLDH*KQADPCVTCNS
Trigger: AGAGTTGCAAGTCACACAAGGATCAGCCTGTTTGCAGTGGTCGAGGAGTTTGTGTTTGTGGGAAATGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS CCA 72 bp ATCCGATATGACTTTCACAGACAGCTGCCTGAAGCATaGCGTCAAAACCTCCTTCTGGTGTATCTATGTTTC +
Preference number: 6 (lower is better)
Translates to: IRYDFHRQLPEA*RQNLLLVYLCF
Trigger: GAAACATAGATACACCAGAAGGAGGTTTTGACGCCATGCTTCAGGCAGCTGTCTGTGAAAGTCATATCGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS CAA 90 bp TTTACAAGAAGAACCATTGTGAAGCCACTAATGACACCCATGGTGTaGAAATGGGCCATCACAAGAAGCCCAGTCAGATGGGATCATACT +
Preference number: 6 (lower is better)
Translates to: FTRRTIVKPLMTPMV*KWAITRSPVRWDHT
Trigger: AGTATGATCCCATCTGACTGGGCTTCTTGTGATGGCCCATTTCAACACCATGGGTGTCATTAGTGGCTTCACAATGGTTCTTCTTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460204.1
CDS TCA 72 bp GGCACTGTTAATTGTACCGGTGCAAGACGTGTAAACTaGAACTCCTCAGGAAAACTGAAGTCTAAGGTTACC +
Preference number: 6 (lower is better)
Translates to: GTVNCTGARRVN*NSSGKLKSKVT
Trigger: GGTAACCTTAGACTTCAGTTTTCCTGAGGAGTTTCAGTTTACACGTCTTGCACCGGTACAATTAACAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460204.1
CDS GCA 72 bp TCAAAGACAGCACATGGATGTATCCATGGGGAGGCATaGAGTCTAAATTGTAGTCACTGTGTGGGAAAAGAA +
Preference number: 6 (lower is better)
Translates to: SKTAHGCIHGEA*SLNCSHCVGKE
Trigger: TTCTTTTCCCACACAGTGACTACAATTTAGACTGCATGCCTCCCCATGGATACATCCATGTGCTGTCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS TCA 72 bp GCCTTGTACCTGGTTTTCCACCTGAACTTTCACTTCTaGAATGAGCTTCTGATAGGCTTCCACTACCAAATT +
Preference number: 6 (lower is better)
Translates to: ALYLVFHLNFHF*NELLIGFHYQI
Trigger: AATTTGGTAGTGGAAGCCTATCAGAAGCTCATTTCAGAAGTGAAAGTTCAGGTGGAAAACCAGGTACAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222573.5
ENST00000478974.1
ENST00000537992.5
CDS TCA 72 bp TTGGTCGACATAATGCTGTTGTTCCATGAGAGCACATaGGGTTTTGCACTGATCAAGTATAGCCTGAGACAA +
Preference number: 6 (lower is better)
Translates to: LVDIMLLFHEST*GFALIKYSLRQ
Trigger: TTGTCTCAGGCTATACTTGATCAGTGCAAAACCTCATGTGCTCTCATGGAACAACAGCATTATGTCGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS TCA 72 bp CCATTTTTATTTCTTCAGGCTTCTCACGTCGGTAGGTaGCTGCTCTTGTGCAAACACTTTGCAGAATCAACT +
Preference number: 6 (lower is better)
Translates to: PFLFLQASHVGR*LLLCKHFAEST
Trigger: AGTTGATTCTGCAAAGTGTTTGCACAAGAGCAGTCACCTACCGACGTGAGAAGCCTGAAGAAATAAAAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS TCA 72 bp CTTGACAGAGAAAAACCTGGAAGCAGACACCAAATTTaGGGTTATAGAGACGAGGAAAGGGAGATGCTAGAA +
Preference number: 6 (lower is better)
Translates to: LDREKPGSRHQI*GYRDEEREMLE
Trigger: TTCTAGCATCTCCCTTTCCTCGTCTCTATAACCTCAAATTTGGTGTCTGCTTCCAGGTTTTTCTCTGTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS CCA 72 bp CTGAAGCCTGATGTTCTATGGCTAACATGTTACATGTaGCTGACAACTGGGCTTCTGTACTATCTTTTGAAG +
Preference number: 6 (lower is better)
Translates to: LKPDVLWLTCYM*LTTGLLYYLLK
Trigger: CTTCAAAAGATAGTACAGAAGCCCAGTTGTCAGCCACATGTAACATGTTAGCCATAGAACATCAGGCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS TCA 72 bp AGAATATTTGGGAACATGAGCACCCAAGTGAGTTTCTaGCCGTTTTCCCTAAGATCCCATCTGAAGAATGTT +
Preference number: 6 (lower is better)
Translates to: RIFGNMSTQVSF*PFSLRSHLKNV
Trigger: AACATTCTTCAGATGGGATCTTAGGGAAAACGGTCAGAAACTCACTTGGGTGCTCATGTTCCCAAATATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS TCA 72 bp TTGATGGATGCATCAATCCTGTTCCGGTACAACAGATaGCAGAGCTGTTTCGGTAAATTGGAATGTGTATTG +
Preference number: 6 (lower is better)
Translates to: LMDASILFRYNR*QSCFGKLECVL
Trigger: CAATACACATTCCAATTTACCGAAACAGCTCTGTCATCTGTTGTACCGGAACAGGATTGATGCATCCATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS TCA 72 bp TGTACATTCACCTCAAGAAGGCTTATGAAACTCCATTaGTGGATGCATCAATCCTGTTCCGGTACAACAGAT +
Preference number: 6 (lower is better)
Translates to: CTFTSRRLMKLH*WMHQSCSGTTD
Trigger: ATCTGTTGTACCGGAACAGGATTGATGCATCCATCAATGGAGTTTCATAAGCCTTCTTGAGGTGAATGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS GCA 72 bp TTTTATTTCTTCAGGCTTCTCACGTCGGTAGGTGACTaGTCTTGTGCAAACACTTTGCAGAATCAACTTATC +
Preference number: 6 (lower is better)
Translates to: FYFFRLLTSVGD*SCANTLQNQLI
Trigger: GATAAGTTGATTCTGCAAAGTGTTTGCACAAGAGCAGTCACCTACCGACGTGAGAAGCCTGAAGAAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222573.5
ENST00000537992.5
CDS CCA 72 bp TGTTCTATGGCTAACATGTTACATGTGGCTGACAACTaGGCTTCTGTACTATCTTTTGAAGGCTCTTCCAAA +
Preference number: 6 (lower is better)
Translates to: CSMANMLHVADN*ASVLSFEGSSK
Trigger: TTTGGAAGAGCCTTCAAAAGATAGTACAGAAGCCCAGTTGTCAGCCACATGTAACATGTTAGCCATAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS CAA 72 bp GCAGGCAATCCTCCTAGTTTCCTAACCGTGAATGAGTaGTTCCAGAACCTTGTCAAAGTTCTATATATAGTC +
Preference number: 6 (lower is better)
Translates to: AGNPPSFLTVNE*FQNLVKVLYIV
Trigger: GACTATATATAGAACTTTGACAAGGTTCTGGAACAACTCATTCACGGTTAGGAAACTAGGAGGATTGCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS CAA 90 bp GAACACCATGAGTTAAAGATACACTCTCTCAACATAAAGGTAGACTaGAGGCTGGTTTTGAAGGATAGGCGAAATGCAGAAATCCAGTTA +
Preference number: 6 (lower is better)
Translates to: EHHELKIHSLNIKVD*RLVLKDRRNAEIQL
Trigger: TAACTGGATTTCTGCATTTCGCCTATCCTTCAAAACCAGCCTCAAGTCTACCTTTATGTTGAGAGAGTGTATCTTTAACTCATGGTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460204.1
CDS CAA 90 bp GAAGTACTGGTTTGGGGTCAGGAAATAACAAGCCATGAAACATTCTaGACAGAGAAAAACCTGGAAGCAGACACCAAATTTGAGGTTATA +
Preference number: 6 (lower is better)
Translates to: EVLVWGQEITSHETF*TEKNLEADTKFEVI
Trigger: TATAACCTCAAATTTGGTGTCTGCTTCCAGGTTTTTCTCTGTCAAGAATGTTTCATGGCTTGTTATTTCCTGACCCCAAACCAGTACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS CAA 72 bp CACTCTCTCAACATAAAGGTAGACTTGAGGCTGGTTTaGAAGGATAGGCGAAATGCAGAAATCCAGTTAATA +
Preference number: 6 (lower is better)
Translates to: HSLNIKVDLRLV*KDRRNAEIQLI
Trigger: TATTAACTGGATTTCTGCATTTCGCCTATCCTTCAAAACCAGCCTCAAGTCTACCTTTATGTTGAGAGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460204.1
CDS CAA 72 bp GAGTTAAAGATACACTCTCTCAACATAAAGGTAGACTaGAGGCTGGTTTTGAAGGATAGGCGAAATGCAGAA +
Preference number: 6 (lower is better)
Translates to: ELKIHSLNIKVD*RLVLKDRRNAE
Trigger: TTCTGCATTTCGCCTATCCTTCAAAACCAGCCTCAAGTCTACCTTTATGTTGAGAGAGTGTATCTTTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460204.1
CDS CAA 72 bp CACGCCTGGGTCTTTTTGACTTCCAAACATAGCAATTaGCACAGAAGTGAGAGAATTCTATCATATTCCCTT +
Preference number: 6 (lower is better)
Translates to: HAWVFLTSKHSN*HRSERILSYSL
Trigger: AAGGGAATATGATAGAATTCTCTCACTTCTGTGCAAATTGCTATGTTTGGAAGTCAAAAAGACCCAGGCGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS CAA 90 bp GTTATTAATGCAGGCAATCCTCCTAGTTTCCTAACCGTGAATGAGTaGTTCCAGAACCTTGTCAAAGTTCTATATATAGTCCTAAATCCC +
Preference number: 6 (lower is better)
Translates to: VINAGNPPSFLTVNE*FQNLVKVLYIVLNP
Trigger: GGGATTTAGGACTATATATAGAACTTTGACAAGGTTCTGGAACAACTCATTCACGGTTAGGAAACTAGGAGGATTGCCTGCATTAATAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS TCA 72 bp AAGTTTATAACATTAGAAACTGGTGGAACTAGGATTTaGATCCAACTCAGTGTTTCTTCAGAGCCTGCTCTT +
Preference number: 6 (lower is better)
Translates to: KFITLETGGTRI*IQLSVSSEPAL
Trigger: AAGAGCAGGCTCTGAAGAAACACTGAGTTGGATTCAAATCCTAGTTCCACCAGTTTCTAATGTTATAAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS TCA 72 bp AATTCTCATCTTTTGACCCACTTTCTTTGTGATAACTaGGATTTCTTTGTAGTCACATCGGAGACAACATCA +
Preference number: 6 (lower is better)
Translates to: NSHLLTHFLCDN*DFFVVTSETTS
Trigger: TGATGTTGTCTCCGATGTGACTACAAAGAAATCTCAGTTATCACAAAGAAAGTGGGTCAAAAGATGAGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS GCA 72 bp AAGAGAAAGCAAAGTATATGGAATGGCAGATTAACATaGTACATAATAGTGCAAGCAAACTGGATACATCCT +
Preference number: 6 (lower is better)
Translates to: KRKQSIWNGRLT*YIIVQANWIHP
Trigger: AGGATGTATCCAGTTTGCTTGCACTATTATGTAGCATGTTAATCTGCCATTCCATATACTTTGCTTTCTCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477859.1
CDS GCA 72 bp TGGGTATTAATTTCATTTTCAGTGGGTATTATAACATaGACAGATGGGTATTCTATTGAATCAACTGAGCAG +
Preference number: 6 (lower is better)
Translates to: WVLISFSVGIIT*TDGYSIESTEQ
Trigger: CTGCTCAGTTGATTCAATAGAATACCCATCTGTGCATGTTATAATACCCACTGAAAATGAAATTAATACCCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222573.5
ENST00000477859.1
ENST00000478974.1
ENST00000537992.5