RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ITGA8 (Homo sapiens)

Ensembl gene IDs: ENSG00000077943

Ensembl transcript IDs: ENST00000378076.4, ENST00000468882.1, ENST00000477064.1

Found 350 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTaGGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTT +
Preference number: 1 (lower is better)
Translates to: GRWKVPVPLGKGHLG*DSGMVQFTLEPSCL
Trigger: AAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CCA 90 bp TGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTaGCTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATG +
Preference number: 1 (lower is better)
Translates to: CGQVEGARPSRKGPS*LRLWDGAVHFGALM
Trigger: CATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR TCA 90 bp GGCTCACTGGGCACCCAGGACAATTTCTCCAAAGTGCGGTGTAGATaGGGTGATGTTTCCAGGGTCCCCTCCATTTCCTGGGTCACTGTC +
Preference number: 1 (lower is better)
Translates to: GSLGTQDNFSKVRCR*GDVSRVPSISWVTV
Trigger: GACAGTGACCCAGGAAATGGAGGGGACCCTGGAAACATCACCTCATCTACACCGCACTTTGGAGAAATTGTCCTGGGTGCCCAGTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CCA 90 bp GAAAGGGCCATCTTGGCTGAGACTCTGGGATGGTGCAGTTCACTTTaGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGTCTTCCTCC +
Preference number: 1 (lower is better)
Translates to: ERAILAETLGWCSSL*SPHALLHSGSQSSS
Trigger: GGAGGAAGACTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR TCA 90 bp ACTGCACCAGCGTGCTCGTCCATGTGCCTTTCATTTGCTCCTCAATaGAGTTCCGCAGCTGTAGCCAAATGGCTCCTCTCCAGCTTATGG +
Preference number: 1 (lower is better)
Translates to: TAPACSSMCLSFAPQ*SSAAVAKWLLSSLW
Trigger: CCATAAGCTGGAGAGGAGCCATTTGGCTACAGCTGCGGAACTTCATTGAGGAGCAAATGAAAGGCACATGGACGAGCACGCTGGTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR TCA 90 bp TCAGTGCTCATCCGTAGTCAGCCACACAAACCAGCCTTGAGCTCCTaGCCGACCCGAAACTGCTACCAGGACAGTATTCAATTCACAGGC +
Preference number: 1 (lower is better)
Translates to: SVLIRSQPHKPALSS*PTRNCYQDSIQFTG
Trigger: GCCTGTGAATTGAATACTGTCCTGGTAGCAGTTTCGGGTCGGTCAGGAGCTCAAGGCTGGTTTGTGTGGCTGACTACGGATGAGCACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR TCA 90 bp AGGCAACTTCAGTGCTCATCCGTAGTCAGCCACACAAACCAGCCTTaGGCTCCTGACCGACCCGAAACTGCTACCAGGACAGTATTCAAT +
Preference number: 1 (lower is better)
Translates to: RQLQCSSVVSHTNQP*APDRPETATRTVFN
Trigger: ATTGAATACTGTCCTGGTAGCAGTTTCGGGTCGGTCAGGAGCTCAAGGCTGGTTTGTGTGGCTGACTACGGATGAGCACTGAAGTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR GCA 90 bp AGACTTTGCTTCCATATTCTAAAGGGCAGAGGGCCACTGCGTGCATaGGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGT +
Preference number: 1 (lower is better)
Translates to: RLCFHILKGRGPLRA*ACVQRPSAIPIGSS
Trigger: ACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATATGGAAGCAAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CCA 90 bp GATGGCTTCTCCAGCTTTGGTGTTTCCTTTTCCAACAGGGCTCACTaGGCACCCAGGACAATTTCTCCAAAGTGCGGTGTAGATGAGGTG +
Preference number: 1 (lower is better)
Translates to: DGFSSFGVSFSNRAH*APRTISPKCGVDEV
Trigger: CACCTCATCTACACCGCACTTTGGAGAAATTGTCCTGGGTGCCCAGTGAGCCCTGTTGGAAAAGGAAACACCAAAGCTGGAGAAGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CCA 90 bp ATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTaGAAGACTAACACCAAAGACCCCCAGAGGCTGGTGTGGACACCC +
Preference number: 1 (lower is better)
Translates to: ITSCRWPPTCKTSST*KTNTKDPQRLVWTP
Trigger: GGGTGTCCACACCAGCCTCTGGGGGTCTTTGGTGTTAGTCTTCCAGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CCA 90 bp TATTGGTCACAGATCAGCCAGGATCACCAGATTCAGGGCATTACCTaGGGTCAGAGAGAGCTGTCTGGCATCGCTCACATCACATCCTGT +
Preference number: 1 (lower is better)
Translates to: YWSQISQDHQIQGIT*GQRELSGIAHITSC
Trigger: ACAGGATGTGATGTGAGCGATGCCAGACAGCTCTCTCTGACCCCAGGTAATGCCCTGAATCTGGTGATCCTGGCTGATCTGTGACCAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR GCA 90 bp AAGAACATGAACTGCACCAGCGTGCTCGTCCATGTGCCTTTCATTTaGTCCTCAATGAAGTTCCGCAGCTGTAGCCAAATGGCTCCTCTC +
Preference number: 1 (lower is better)
Translates to: KNMNCTSVLVHVPFI*SSMKFRSCSQMAPL
Trigger: GAGAGGAGCCATTTGGCTACAGCTGCGGAACTTCATTGAGGAGCAAATGAAAGGCACATGGACGAGCACGCTGGTGCAGTTCATGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CCA 90 bp GTGTGTTCTCTGTCGTCAGTATGTTCTCTGGGCAGAACGGATTGCTaGAAGGTTTGCCTGACCTCAGTTTCCTCCCTTTCTCCATTTGCT +
Preference number: 1 (lower is better)
Translates to: VCSLSSVCSLGRTDC*KVCLTSVSSLSPFA
Trigger: AGCAAATGGAGAAAGGGAGGAAACTGAGGTCAGGCAAACCTTCCAGCAATCCGTTCTGCCCAGAGAACATACTGACGACAGAGAACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR GCA 90 bp ATTCAGACATTTCATCTCTGCAACTTATGCTGGATTGATCTGGACTaGAACTTACGTTCCCATACGCATTTCAAAGTGTCTGCCAAGTAC +
Preference number: 1 (lower is better)
Translates to: IQTFHLCNLCWIDLD*NLRSHTHFKVSAKY
Trigger: GTACTTGGCAGACACTTTGAAATGCGTATGGGAACGTAAGTTGCAGTCCAGATCAATCCAGCATAAGTTGCAGAGATGAAATGTCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR TCA 90 bp TTCTATAGTGATTCAGACATTTCATCTCTGCAACTTATGCTGGATTaGTCTGGACTGCAACTTACGTTCCCATACGCATTTCAAAGTGTC +
Preference number: 1 (lower is better)
Translates to: FYSDSDISSLQLMLD*SGLQLTFPYAFQSV
Trigger: GACACTTTGAAATGCGTATGGGAACGTAAGTTGCAGTCCAGATCAATCCAGCATAAGTTGCAGAGATGAAATGTCTGAATCACTATAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR TCA 90 bp TTCAAAAGTACTTTCACAGTACCAACAACATATTGCTTGTCTCCCTaGGCCATAATGTCCTTAGAAATGTTTCTTTTCCATAGGGAGGTG +
Preference number: 1 (lower is better)
Translates to: FKSTFTVPTTYCLSP*AIMSLEMFLFHREV
Trigger: CACCTCCCTATGGAAAAGAAACATTTCTAAGGACATTATGGCTCAGGGAGACAAGCAATATGTTGTTGGTACTGTGAAAGTACTTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR GCA 90 bp CTTGTAAATTCTATAGTGATTCAGACATTTCATCTCTGCAACTTATaGTGGATTGATCTGGACTGCAACTTACGTTCCCATACGCATTTC +
Preference number: 1 (lower is better)
Translates to: LVNSIVIQTFHLCNL*WIDLDCNLRSHTHF
Trigger: GAAATGCGTATGGGAACGTAAGTTGCAGTCCAGATCAATCCAGCATAAGTTGCAGAGATGAAATGTCTGAATCACTATAGAATTTACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR TCA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCCCAGCCTTGAGCTCCTaGCCGACCCGAAACTGCTAC +
Preference number: 2 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGPALSS*PTRNCY
Trigger: GTAGCAGTTTCGGGTCGGTCAGGAGCTCAAGGCTGG...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CCA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTCCAACAGGGCTCACTaGGCACCCAGGACAATTTCT +
Preference number: 2 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGSNRAH*APRTIS
Trigger: AGAAATTGTCCTGGGTGCCCAGTGAGCCCTGTTGGA...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR TCA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCAAAGTGCGGTGTAGATaGGGTGATGTTTCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGKVRCR*GDVSRV
Trigger: GACCCTGGAAACATCACCTCATCTACACCGCACTTT...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR TCA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCATTTGCTCCTCAATaGAGTTCCGCAGCTGTAGCC +
Preference number: 2 (lower is better)
Translates to: GSSACGQVEGARPSRKGPSFAPQ*SSAAVA
Trigger: GGCTACAGCTGCGGAACTTCATTGAGGAGCAAATGA...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR GCA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCGCGTGCTCGTCCATGTaGCTTTCATTTGCTCCTCAA +
Preference number: 2 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGACSSM*LSFAPQ
Trigger: TTGAGGAGCAAATGAAAGGCACATGGACGAGCACGC...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR GCA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTTGAGGCAACTTCAGTaGTCATCCGTAGTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGLRQLQ*SSVVSH
Trigger: GTGGCTGACTACGGATGAGCACTGAAGTTGCCTCAA...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CCA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCAGAGAGAGCTGTCTaGCATCGCTCACATCACATC +
Preference number: 2 (lower is better)
Translates to: GSSACGQVEGARPSRKGPSERAV*HRSHHI
Trigger: GATGTGATGTGAGCGATGCCAGACAGCTCTCTCTGA...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CCA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCAATTCAGGGCATTACCTaGGGTCAGAGAGAGCTGTCT +
Preference number: 2 (lower is better)
Translates to: GSSACGQVEGARPSRKGPIQGIT*GQRELS
Trigger: AGACAGCTCTCTCTGACCCCAGGTAATGCCCTGAAT...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR GCA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCACATCTCTGCAACTTATaGTGGATTGATCTGGACTGC +
Preference number: 2 (lower is better)
Translates to: GSSACGQVEGARPSRKGPHLCNL*WIDLDC
Trigger: GCAGTCCAGATCAATCCAGCATAAGTTGCAGAGATG...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CCA 90 bp GAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTGAGACTCTGGGATGGTGTCCCCTCCATTTCCTaGGTCACTGTCAGGTATCAG +
Preference number: 2 (lower is better)
Translates to: EGARPSRKGPSWLRLWDGVPSIS*VTVRYQ
Trigger: CTGATACCTGACAGTGACCCAGGAAATGGAGGGGAC...ACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CCA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCACTCTGCAACTTATGCTaGATTGATCTGGACTGCAAC +
Preference number: 2 (lower is better)
Translates to: GSSACGQVEGARPSRKGPLCNLC*IDLDCN
Trigger: GTTGCAGTCCAGATCAATCCAGCATAAGTTGCAGAG...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CCA 90 bp GAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTGAGACTCTGGGATGGTCCCCAGAGGCTGGTGTaGACACCCCTTAATTCTTTG +
Preference number: 2 (lower is better)
Translates to: EGARPSRKGPSWLRLWDGPQRLV*TPLNSL
Trigger: CAAAGAATTAAGGGGTGTCCACACCAGCCTCTGGGG...ACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR TCA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCCTTTCAAACAAAGCGTaGTTGTTGAAATCAGGACAC +
Preference number: 2 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGLSNKA*LLKSGH
Trigger: GTGTCCTGATTTCAACAATCACGCTTTGTTTGAAAG...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR TCA 90 bp GAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTGAGACTCTGGGATGGTAGAAGCTCTGCTAAATaGGTTATCTGCACACAGTGG +
Preference number: 2 (lower is better)
Translates to: EGARPSRKGPSWLRLWDGRSSAK*VICTQW
Trigger: CCACTGTGTGCAGATAACTCATTTAGCAGAGCTTCT...ACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR GCA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCCAGACATTTCATCTCTaGAACTTATGCTGGATTGAT +
Preference number: 2 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGQTFHL*NLCWID
Trigger: ATCAATCCAGCATAAGTTGCAGAGATGAAATGTCTG...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CCA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCCTCCTCTCCAGCTTATaGCATGACATAAAATTTAGT +
Preference number: 2 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGLLSSL*HDIKFS
Trigger: ACTAAATTTTATGTCATGCCATAAGCTGGAGAGGAG...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CCA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTTGGTGCAGTTCACTTTaGAGCCCTCATGCCTTGCTT +
Preference number: 2 (lower is better)
Translates to: ACACVQRPSAIPIGSSACWCSSL*SPHALL
Trigger: AAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCA...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CAA 90 bp AACACCAAAGACCCCCAGAGGCTGGTGTGGACACCCCTTAATTCTTaGAGGCAACTTCAGTGCTCATCCGTAGTCAGCCACACAAACCAG +
Preference number: 2 (lower is better)
Translates to: NTKDPQRLVWTPLNS*RQLQCSSVVSHTNQ
Trigger: CTGGTTTGTGTGGCTGACTACGGATGAGCACTGAAGTTGCCTCAAAGAATTAAGGGGTGTCCACACCAGCCTCTGGGGGTCTTTGGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR TCA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTCACACAAACCAGCCTTaGGCTCCTGACCGACCCGAA +
Preference number: 2 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPHTNQP*APDRPE
Trigger: TTCGGGTCGGTCAGGAGCTCAAGGCTGGTTTGTGTG...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR GCA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTCCCAGTTTGGCTCATaGCTGTATAATTTTATGTTT +
Preference number: 2 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGSQFGS*LYNFMF
Trigger: AAACATAAAATTATACAGGCATGAGCCAAACTGGGA...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR TCA 90 bp TATTCTAAAGGGCAGAGGGCCACTGCGTGCATGCGCGTGTGTACAACGGCCTTCTATTGCTTGTCTCCCTaGGCCATAATGTCCTTAGAA +
Preference number: 2 (lower is better)
Translates to: YSKGQRATACMRVCTTAFYCLSP*AIMSLE
Trigger: TTCTAAGGACATTATGGCTCAGGGAGACAAGCAATA...GAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR TCA 90 bp GAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTGAGACTCTGGGATGGTTCCAAATTCTCTAGATaGCAGATTCTCAACCTAGAG +
Preference number: 2 (lower is better)
Translates to: EGARPSRKGPSWLRLWDGSKFSR*QILNLE
Trigger: CTCTAGGTTGAGAATCTGTCATCTAGAGAATTTGGA...ACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CCA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTTTCCTTCACCAATGTTaGCTTAAAGACAAGGGGTGC +
Preference number: 2 (lower is better)
Translates to: ACACVQRPSAIPIGSSACFLHQC*LKDKGC
Trigger: GCACCCCTTGTCTTTAAGCCAACATTGGTGAAGGAA...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CCA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTAAAACCAGCTCTACCTaGAAGACTAACACCAAAGAC +
Preference number: 2 (lower is better)
Translates to: ACACVQRPSAIPIGSSACKTSST*KTNTKD
Trigger: GTCTTTGGTGTTAGTCTTCCAGGTAGAGCTGGTTTT...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CCA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTATCACATCCTGTAGATaGCCACCTACTTGTAAAACC +
Preference number: 2 (lower is better)
Translates to: ACACVQRPSAIPIGSSACITSCR*PPTCKT
Trigger: GGTTTTACAAGTAGGTGGCCATCTACAGGATGTGAT...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR TCA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCAACTTATGCTGGATTaGTCTGGACTGCAACTTACG +
Preference number: 2 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIQLMLD*SGLQLT
Trigger: CGTAAGTTGCAGTCCAGATCAATCCAGCATAAGTTG...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR GCA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTTGGATTGATCTGGACTaGAACTTACGTTCCCATACG +
Preference number: 2 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIWIDLD*NLRSHT
Trigger: CGTATGGGAACGTAAGTTGCAGTCCAGATCAATCCA...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR GCA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTAGGAAGAACATGAACTaGACCAGCGTGCTCGTCCAT +
Preference number: 2 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPRKNMN*TSVLVH
Trigger: ATGGACGAGCACGCTGGTGCAGTTCATGTTCTTCCT...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR TCA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTACAAAGCGTGATTGTTaGAATCAGGACACAAAGTTT +
Preference number: 2 (lower is better)
Translates to: ACACVQRPSAIPIGSSACTKRDC*NQDTKF
Trigger: AAACTTTGTGTCCTGATTTCAACAATCACGCTTTGT...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR TCA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGTTCTTAGGAGGAAACTaGGTGAGTGATTTTGAAAAC +
Preference number: 2 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQFLGGN*VSDFEN
Trigger: GTTTTCAAAATCACTCACTCAGTTTCCTCCTAAGAA...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CCA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTTACAGTAGTGTTGGATaGTGTGGTCTTAGTTCTAAG +
Preference number: 2 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIYSSVG*CGLSSK
Trigger: CTTAGAACTAAGACCACACCATCCAACACTACTGTA...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR TCA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACACAGGCAGGAAGAACATaGACTGCACCAGCGTGCTCG +
Preference number: 2 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTQAGRT*TAPACS
Trigger: CGAGCACGCTGGTGCAGTTCATGTTCTTCCTGCCTG...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR TCA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTATCTTCCACAATTGCTaGTGGCTTCTCCAGCTTTGG +
Preference number: 2 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVIFHNC*WLLQLW
Trigger: CCAAAGCTGGAGAAGCCATCAGCAATTGTGGAAGAT...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CAA 90 bp CTTTTCCATAGGGAGGTGTCAAATGTTCCATTGGATACAGTAGTGTaGGATGGTGTGGTCTTAGTTCTAAGTTCTATAGTAAATCAGTCA +
Preference number: 2 (lower is better)
Translates to: LFHREVSNVPLDTVV*DGVVLVLSSIVNQS
Trigger: TGACTGATTTACTATAGAACTTAGAACTAAGACCACACCATCCAACACTACTGTATCCAATGGAACATTTGACACCTCCCTATGGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CAA 90 bp TCCTTAGAAATGTTTCTTTTCCATAGGGAGGTGTCAAATGTTCCATaGGATACAGTAGTGTTGGATGGTGTGGTCTTAGTTCTAAGTTCT +
Preference number: 2 (lower is better)
Translates to: SLEMFLFHREVSNVP*DTVVLDGVVLVLSS
Trigger: AGAACTTAGAACTAAGACCACACCATCCAACACTACTGTATCCAATGGAACATTTGACACCTCCCTATGGAAAAGAAACATTTCTAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CCA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTTATGCTGGATTGATCTaGACTGCAACTTACGTTCCC +
Preference number: 2 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVYAGLI*TATYVP
Trigger: GGGAACGTAAGTTGCAGTCCAGATCAATCCAGCATA...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR TCA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTAACAGGACCAGTGTTTaGGGTCTTTGGTCTTCTTTT +
Preference number: 2 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVNRTSV*GLWSSF
Trigger: AAAAGAAGACCAAAGACCTCAAACACTGGTCCTGTT...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR TCA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTGGTATCAGAAAGCTTTaGTTTTTAACCCTCATGTTC +
Preference number: 2 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVGIRKL*FLTLMF
Trigger: GAACATGAGGGTTAAAAATCAAAGCTTTCTGATACC...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR TCA 72 bp AAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTaGGACTCTGGGATGGTGCAGTTCACTTTGGAGCCC +
Preference number: 3 (lower is better)
Translates to: KVPVPLGKGHLG*DSGMVQFTLEP
Trigger: GGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CCA 72 bp GTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTaGCTGAGACTCTGGGATGGTGCAGTTCACTTTGGA +
Preference number: 3 (lower is better)
Translates to: VEGARPSRKGPS*LRLWDGAVHFG
Trigger: TCCAAAGTGAACTGCACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CCA 72 bp CAGATCAGCCAGGATCACCAGATTCAGGGCATTACCTaGGGTCAGAGAGAGCTGTCTGGCATCGCTCACATC +
Preference number: 3 (lower is better)
Translates to: QISQDHQIQGIT*GQRELSGIAHI
Trigger: GATGTGAGCGATGCCAGACAGCTCTCTCTGACCCCAGGTAATGCCCTGAATCTGGTGATCCTGGCTGATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CAA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCAGTGTCAAATGTTCCATaGGATACAGTAGTGTTGGAT +
Preference number: 3 (lower is better)
Translates to: GSSACGQVEGARPSRKGPVSNVP*DTVVLD
Trigger: ATCCAACACTACTGTATCCAATGGAACATTTGACAC...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CAA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTTAGTGTCTGTGAGCTaGGCTCATCTTTCAAACAAA +
Preference number: 3 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGLVSVS*AHLSNK
Trigger: TTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAA...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR TCA 72 bp GGCACCCAGGACAATTTCTCCAAAGTGCGGTGTAGATaGGGTGATGTTTCCAGGGTCCCCTCCATTTCCTGG +
Preference number: 3 (lower is better)
Translates to: GTQDNFSKVRCR*GDVSRVPSISW
Trigger: CCAGGAAATGGAGGGGACCCTGGAAACATCACCTCATCTACACCGCACTTTGGAGAAATTGTCCTGGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR TCA 72 bp GCGTGCTCGTCCATGTGCCTTTCATTTGCTCCTCAATaGAGTTCCGCAGCTGTAGCCAAATGGCTCCTCTCC +
Preference number: 3 (lower is better)
Translates to: ACSSMCLSFAPQ*SSAAVAKWLLS
Trigger: GGAGAGGAGCCATTTGGCTACAGCTGCGGAACTTCATTGAGGAGCAAATGAAAGGCACATGGACGAGCACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR GCA 72 bp TGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTaGTTCATTCTGGGTCTCAGTCTTCCTCCTGGCATC +
Preference number: 3 (lower is better)
Translates to: WDGAVHFGALMP*FILGLSLPPGI
Trigger: GATGCCAGGAGGAAGACTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR GCA 72 bp TTGCTTCCATATTCTAAAGGGCAGAGGGCCACTGCGTaGATGCGCGTGTGTACAACGGCCTTCTGCAATTCC +
Preference number: 3 (lower is better)
Translates to: LLPYSKGQRATA*MRVCTTAFCNS
Trigger: GGAATTGCAGAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATATGGAAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CAA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATGTAAACTTAAGGATTaGGGTCAGCTTGTTCTATCA +
Preference number: 3 (lower is better)
Translates to: GSSACGQVEGARPSRKGPCKLKD*GQLVLS
Trigger: TGATAGAACAAGCTGACCCAAATCCTTAAGTTTACA...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR TCA 72 bp ATCCGTAGTCAGCCACACAAACCAGCCTTGAGCTCCTaGCCGACCCGAAACTGCTACCAGGACAGTATTCAA +
Preference number: 3 (lower is better)
Translates to: IRSQPHKPALSS*PTRNCYQDSIQ
Trigger: TTGAATACTGTCCTGGTAGCAGTTTCGGGTCGGTCAGGAGCTCAAGGCTGGTTTGTGTGGCTGACTACGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR GCA 72 bp TTCCATATTCTAAAGGGCAGAGGGCCACTGCGTGCATaGGCGTGTGTACAACGGCCTTCTGCAATTCCCATA +
Preference number: 3 (lower is better)
Translates to: FHILKGRGPLRA*ACVQRPSAIPI
Trigger: TATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CCA 72 bp ATCTTGGCTGAGACTCTGGGATGGTGCAGTTCACTTTaGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAG +
Preference number: 3 (lower is better)
Translates to: ILAETLGWCSSL*SPHALLHSGSQ
Trigger: CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAGCCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CAA 90 bp GAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTGAGACTCTGGGATGGTTTGGATACAGTAGTGTaGGATGGTGTGGTCTTAGTT +
Preference number: 3 (lower is better)
Translates to: EGARPSRKGPSWLRLWDGLDTVV*DGVVLV
Trigger: AACTAAGACCACACCATCCAACACTACTGTATCCAA...ACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CAA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTAGTACCAACAACATATaGCTTGTCTCCCTGAGCCAT +
Preference number: 3 (lower is better)
Translates to: ACACVQRPSAIPIGSSACSTNNI*LVSLSH
Trigger: ATGGCTCAGGGAGACAAGCAATATGTTGTTGGTACT...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CAA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGCCATGTGCCTTTCATTaGCTCCTCAATGAAGTTCCG +
Preference number: 3 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQPCAFH*LLNEVP
Trigger: CGGAACTTCATTGAGGAGCAAATGAAAGGCACATGG...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR GCA 72 bp AACTGCACCAGCGTGCTCGTCCATGTGCCTTTCATTTaGTCCTCAATGAAGTTCCGCAGCTGTAGCCAAATG +
Preference number: 3 (lower is better)
Translates to: NCTSVLVHVPFI*SSMKFRSCSQM
Trigger: CATTTGGCTACAGCTGCGGAACTTCATTGAGGAGCAAATGAAAGGCACATGGACGAGCACGCTGGTGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR GCA 72 bp TCTCTGTCGTCAGTATGTTCTCTGGGCAGAACGGATTaGTGGAAGGTTTGCCTGACCTCAGTTTCCTCCCTT +
Preference number: 3 (lower is better)
Translates to: SLSSVCSLGRTD*WKVCLTSVSSL
Trigger: AAGGGAGGAAACTGAGGTCAGGCAAACCTTCCAGCAATCCGTTCTGCCCAGAGAACATACTGACGACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CCA 72 bp TCCAGCTTTGGTGTTTCCTTTTCCAACAGGGCTCACTaGGCACCCAGGACAATTTCTCCAAAGTGCGGTGTA +
Preference number: 3 (lower is better)
Translates to: SSFGVSFSNRAH*APRTISPKCGV
Trigger: TACACCGCACTTTGGAGAAATTGTCCTGGGTGCCCAGTGAGCCCTGTTGGAAAAGGAAACACCAAAGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CCA 72 bp TGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTaGAAGACTAACACCAAAGACCCCCAGAGGCTGGTG +
Preference number: 3 (lower is better)
Translates to: CRWPPTCKTSST*KTNTKDPQRLV
Trigger: CACCAGCCTCTGGGGGTCTTTGGTGTTAGTCTTCCAGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CCA 72 bp GAGCTGTCTGGCATCGCTCACATCACATCCTGTAGATaGCCACCTACTTGTAAAACCAGCTCTACCTGGAAG +
Preference number: 3 (lower is better)
Translates to: ELSGIAHITSCR*PPTCKTSSTWK
Trigger: CTTCCAGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGATGCCAGACAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CAA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGGAACAGGACCAGTGTTaGAGGTCTTTGGTCTTCTTT +
Preference number: 3 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQEQDQC*RSLVFF
Trigger: AAAGAAGACCAAAGACCTCAAACACTGGTCCTGTTC...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR TCA 72 bp GATTCAGACATTTCATCTCTGCAACTTATGCTGGATTaGTCTGGACTGCAACTTACGTTCCCATACGCATTT +
Preference number: 3 (lower is better)
Translates to: DSDISSLQLMLD*SGLQLTFPYAF
Trigger: AAATGCGTATGGGAACGTAAGTTGCAGTCCAGATCAATCCAGCATAAGTTGCAGAGATGAAATGTCTGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR TCA 72 bp GTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTaGTTGTTGAAATCAGGACACAAAGTTTTCCAACAG +
Preference number: 3 (lower is better)
Translates to: VSVSLAHLSNKA*LLKSGHKVFQQ
Trigger: CTGTTGGAAAACTTTGTGTCCTGATTTCAACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR TCA 72 bp AATACAGATAGACCCTCAGAGGAGCACAGCACATTATaGATTATGAAGGCAATCGGCAATGCTCTAACTAGA +
Preference number: 3 (lower is better)
Translates to: NTDRPSEEHSTL*IMKAIGNALTR
Trigger: TCTAGTTAGAGCATTGCCGATTGCCTTCATAATTCATAATGTGCTGTGCTCCTCTGAGGGTCTATCTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR GCA 72 bp TTTCATCTCTGCAACTTATGCTGGATTGATCTGGACTaGAACTTACGTTCCCATACGCATTTCAAAGTGTCT +
Preference number: 3 (lower is better)
Translates to: FHLCNLCWIDLD*NLRSHTHFKVS
Trigger: AGACACTTTGAAATGCGTATGGGAACGTAAGTTGCAGTCCAGATCAATCCAGCATAAGTTGCAGAGATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CCA 72 bp AGACATTTCATCTCTGCAACTTATGCTGGATTGATCTaGACTGCAACTTACGTTCCCATACGCATTTCAAAG +
Preference number: 3 (lower is better)
Translates to: RHFISATYAGLI*TATYVPIRISK
Trigger: CTTTGAAATGCGTATGGGAACGTAAGTTGCAGTCCAGATCAATCCAGCATAAGTTGCAGAGATGAAATGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CAA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACAGAAAATCTTCCACAATaGCTGATGGCTTCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTENLPQ*LMASPA
Trigger: AGCTGGAGAAGCCATCAGCAATTGTGGAAGATTTTC...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR GCA 72 bp TCTATAGTGATTCAGACATTTCATCTCTGCAACTTATaGTGGATTGATCTGGACTGCAACTTACGTTCCCAT +
Preference number: 3 (lower is better)
Translates to: SIVIQTFHLCNL*WIDLDCNLRSH
Trigger: ATGGGAACGTAAGTTGCAGTCCAGATCAATCCAGCATAAGTTGCAGAGATGAAATGTCTGAATCACTATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR-3UTR CAA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACAATCAGTTTTCCCAGTTaGGCTCATGCCTGTATAATT +
Preference number: 3 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTISFPS*AHACII
Trigger: AATTATACAGGCATGAGCCAAACTGGGAAAACTGAT...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR TCA 72 bp ACTTTCACAGTACCAACAACATATTGCTTGTCTCCCTaGGCCATAATGTCCTTAGAAATGTTTCTTTTCCAT +
Preference number: 3 (lower is better)
Translates to: TFTVPTTYCLSP*AIMSLEMFLFH
Trigger: ATGGAAAAGAAACATTTCTAAGGACATTATGGCTCAGGGAGACAAGCAATATGTTGTTGGTACTGTGAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR GCA 72 bp CTTGTAAATTCTATAGTGATTCAGACATTTCATCTCTaGAACTTATGCTGGATTGATCTGGACTGCAACTTA +
Preference number: 3 (lower is better)
Translates to: LVNSIVIQTFHL*NLCWIDLDCNL
Trigger: TAAGTTGCAGTCCAGATCAATCCAGCATAAGTTGCAGAGATGAAATGTCTGAATCACTATAGAATTTACAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCAGGGGCTGGTGGAATCTaGCGGTCCCCAGCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: GSSACGQVEGARPSRKGPGAGGI*RSPAAR
Trigger: ACGGGCAGCTGGGGACCGCCAGATTCCACCAGCCCC...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTGCCCCGGTGGGTGGCTaGTACCCAGGAGCGCGAGCC +
Preference number: 4 (lower is better)
Translates to: ACACVQRPSAIPIGSSACAPVGG*YPGARA
Trigger: GGCTCGCGCTCCTGGGTAGCAGCCACCCACCGGGGC...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCCGTAGCCGAAGTAGCTaGCCTTGGGGCCGCTGTACA +
Preference number: 4 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGRSRSS*PWGRCT
Trigger: TGTACAGCGGCCCCAAGGGCAGCTACTTCGGCTACG...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCAGTGTCAAACGGTATCTaGCTGCACTGCGCAGACCCC +
Preference number: 4 (lower is better)
Translates to: GSSACGQVEGARPSRKGPVSNGI*LHCADP
Trigger: GGGGTCTGCGCAGTGCAGGCAGATACCGTTTGACAC...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTCTCCCTCCGCCCCGGTaGGTGGCTGCTACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ACACVQRPSAIPIGSSACLPPPR*VAATQE
Trigger: CTCCTGGGTAGCAGCCACCCACCGGGGCGGAGGGAG...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCACTGGGCAGAACGGATTaGTGGAAGGTTTGCCTGACC +
Preference number: 4 (lower is better)
Translates to: GSSACGQVEGARPSRKGPLGRTD*WKVCLT
Trigger: GGTCAGGCAAACCTTCCAGCAATCCGTTCTGCCCAG...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTCCGCCCCGGTGGGTaGCTGCTACCCAGGAGCGCG +
Preference number: 4 (lower is better)
Translates to: LRLWDGAVHFGALMPCFILRPGG*LLPRSA
Trigger: CGCGCTCCTGGGTAGCAGCCACCCACCGGGGCGGAG...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp GAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTGAGACTCTGGGATGGTCCAGCCTTGAGCTCCTaGCCGACCCGAAACTGCTAC +
Preference number: 4 (lower is better)
Translates to: EGARPSRKGPSWLRLWDGPALSS*PTRNCY
Trigger: GTAGCAGTTTCGGGTCGGTCAGGAGCTCAAGGCTGG...ACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TATTCTAAAGGGCAGAGGGCCACTGCGTGCATGCGCGTGTGTACAACGGCCTTCCGATATCGGGCTGGCTaGTGTTGGCTTTGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: YSKGQRATACMRVCTTAFRYRAG*CWLWAP
Trigger: GGGCGCCCAAAGCCAACACCAGCCAGCCCGATATCG...GAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCGTGGGGCTCCTCTTCTaGTTCCCAGTTATGAATGGG +
Preference number: 4 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGVGLLF*FPVMNG
Trigger: CCCATTCATAACTGGGAACCAGAAGAGGAGCCCCAC...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCACCTCCTGAGGAGGTCTaGCTCTGTCAAAGAATCCAC +
Preference number: 4 (lower is better)
Translates to: GSSACGQVEGARPSRKGPPPEEV*LCQRIH
Trigger: GTGGATTCTTTGACAGAGCCAGACCTCCTCAGGAGG...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCAAAGACCCCCAGAGGCTaGTGTGGACACCCCTTAATT +
Preference number: 4 (lower is better)
Translates to: GSSACGQVEGARPSRKGPKTPRG*CGHPLI
Trigger: AATTAAGGGGTGTCCACACCAGCCTCTGGGGGTCTT...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCAAGGAAAGGGCCATCTTaGCTGAGACTCTGGGATGGT +
Preference number: 4 (lower is better)
Translates to: GSSACGQVEGARPSRKGPRKGPS*LRLWDG
Trigger: ACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCT...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TATTCTAAAGGGCAGAGGGCCACTGCGTGCATGCGCGTGTGTACAACGGCCTTCGGAAGGGACAGCATGTaGGGCCCACACTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: YSKGQRATACMRVCTTAFGRDSM*GPHSLQ
Trigger: CTGCAAGGAGTGTGGGCCTCACATGCTGTCCCTTCC...GAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp GAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTGAGACTCTGGGATGGTAAGGGCCATCTTGGCTaGGACTCTGGGATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: EGARPSRKGPSWLRLWDGKGHLG*DSGMVQ
Trigger: CTGCACCATCCCAGAGTCTCAGCCAAGATGGCCCTT...ACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTCGTGTCCCGGGTCGGTaGGCTCGGCGCACCCGTGGT +
Preference number: 4 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPRVPGR*ARRTRG
Trigger: ACCACGGGTGCGCCGAGCGCACCGACCCGGGACACG...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCAGGAAGAACATGAACTaGACCAGCGTGCTCGTCCAT +
Preference number: 4 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGRKNMN*TSVLVH
Trigger: ATGGACGAGCACGCTGGTGCAGTTCATGTTCTTCCT...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCAACTTTGGAGCCCTCATaGCTTGCTTCATTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GSSACGQVEGARPSRKGPTLEPS*LASFWV
Trigger: GACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGT...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTAGGGCAGAGGGCCACTaGGTGCATGCGCGTGTGTAC +
Preference number: 4 (lower is better)
Translates to: ACACVQRPSAIPIGSSACRAEGH*VHARVY
Trigger: GTACACACGCGCATGCACGCAGTGGCCCTCTGCCCT...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTGTGCCTGTGGGCAGGTaGAAGGTGCCCGTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: ACACVQRPSAIPIGSSACVPVGR*KVPVPL
Trigger: TAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCACCTCTTATTTCCACCTaGGCTACAGCAGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: GSSACGQVEGARPSRKGPPLIST*ATAVML
Trigger: CAACATCACTGCTGTAGCGCAGGTGGAAATAAGAGG...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATGTTTTCTCAAGACGTaGAACTGCAAATCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GSSACGQVEGARPSRKGPCFLKT*NCKSEA
Trigger: GGCCTCCGATTTGCAGTTCCACGTCTTGAGAAAACA...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTTTTCCACGTCCAGGTTaGACGCCTGACAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIFPRPG*TPDRRG
Trigger: CCCCCGCCTGTCAGGCGTTCAACCTGGACGTGGAAA...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTGAGACTCTGGGATGGTCCTGACTTTCAGGACTaGGCTTTCTCCTCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: EGARPSRKGPSWLRLWDGPDFQD*AFSSFE
Trigger: CTCGAAGGAGGAGAAAGCGCAGTCCTGAAAGTCAGG...ACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCAAAAGGACACCAGGGATaGAAGAGCATAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: GSSACGQVEGARPSRKGPKGHQG*KSIGII
Trigger: AATGATCCCTATGCTCTTGCATCCCTGGTGTCCTTT...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTGGCTGGTGTTGGCTTTaGGCGCCCCCACCAAGACAC +
Preference number: 4 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIGWCWL*APPPRH
Trigger: GTGTCTTGGTGGGGGCGCCCAAAGCCAACACCAGCC...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCAGTACTCACAGCTCAGTaGTCGAAATCCCTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: GSSACGQVEGARPSRKGPVLTAQ*SKSLVV
Trigger: AACAACAAGGGATTTCGACCACTGAGCTGTGAGTAC...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTGAGACTCTGGGATGGTTCCAACAGGGCTCACTaGGCACCCAGGACAATTTCT +
Preference number: 4 (lower is better)
Translates to: EGARPSRKGPSWLRLWDGSNRAH*APRTIS
Trigger: AGAAATTGTCCTGGGTGCCCAGTGAGCCCTGTTGGA...ACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCGGAGCTAATCTCTATTaGTCACAGATCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGGANLY*SQISQD
Trigger: ATCCTGGCTGATCTGTGACCAATAGAGATTAGCTCC...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp GAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTGAGACTCTGGGATGGTAGCACTTTGCCTCTTTaGTCCTTGCCTGCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: EGARPSRKGPSWLRLWDGSTLPL*SLPAKG
Trigger: GCCTTTTGCAGGCAAGGATCAAAGAGGCAAAGTGCT...ACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp GAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTGAGACTCTGGGATGGTCCCATAATCGTGACCTaGCTTTCAGGACTGCGCTTT +
Preference number: 4 (lower is better)
Translates to: EGARPSRKGPSWLRLWDGPIIVT*LSGLRF
Trigger: AAAGCGCAGTCCTGAAAGTCAGGTCACGATTATGGG...ACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCAACAGGACCAGTGTTTaGGGTCTTTGGTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGNRTSV*GLWSSF
Trigger: AAAAGAAGACCAAAGACCTCAAACACTGGTCCTGTT...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTGAGACTCTGGGATGGTATCCAGACTAAATCCTaGTTGGCAGTAACCCTGGCC +
Preference number: 4 (lower is better)
Translates to: EGARPSRKGPSWLRLWDGIQTKS*LAVTLA
Trigger: GGCCAGGGTTACTGCCAAGCAGGATTTAGTCTGGAT...ACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TATTCTAAAGGGCAGAGGGCCACTGCGTGCATGCGCGTGTGTACAACGGCCTTCGGAGCCACTTCCGTCTaGTTTTCTCCTGCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: YSKGQRATACMRVCTTAFGATSV*FSPASF
Trigger: GAAACTGGCAGGAGAAAAGCAGACGGAAGTGGCTCC...GAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCAACTGGGTCCTTTTCTaGTGTCGGTTTAAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGNWVLF*CRFKSS
Trigger: AGAACTCTTAAACCGACACCAGAAAAGGACCCAGTT...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCAAAATCCTGGCACTGGTaGGATTTCTGCCTTTTTATC +
Preference number: 4 (lower is better)
Translates to: GSSACGQVEGARPSRKGPKSWHW*DFCLFI
Trigger: GATAAAAAGGCAGAAATCCCACCAGTGCCAGGATTT...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGCTCAGGGGTGTCCTCTaGGGAGGCAGCAGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQLRGVL*GGSRLY
Trigger: ATAAAGCCTGCTGCCTCCCCAGAGGACACCCCTGAG...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCAGGCAGGAAGAACATaGACTGCACCAGCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIQAGRT*TAPACS
Trigger: CGAGCACGCTGGTGCAGTTCATGTTCTTCCTGCCTG...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGCTCAAGACGTGGAACTaGAAATCGGAGGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQLKTWN*KSEAQG
Trigger: TCCCTGGGCCTCCGATTTGCAGTTCCACGTCTTGAG...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCACAATTCAGTATTTTTaGAGGGCTCTGTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGTIQYF*RALSVE
Trigger: TTCCACAGACAGAGCCCTGCAAAAATACTGAATTGT...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCGTAGTAGTTCAATATTaGTTTCACTTCCAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGVVVQY*FHFQAF
Trigger: GAAGGCCTGGAAGTGAAACCAATATTGAACTACTAC...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TATTCTAAAGGGCAGAGGGCCACTGCGTGCATGCGCGTGTGTACAACGGCCTTCGCAGGGCTCTGTCTGTaGAATTCGACCACATGTACA +
Preference number: 4 (lower is better)
Translates to: YSKGQRATACMRVCTTAFAGLCL*NSTTCT
Trigger: TGTACATGTGGTCGAATTCCACAGACAGAGCCCTGC...GAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGCTCTGGAGGAAGGTGTaGGCCCATAATCGTGACCTG +
Preference number: 4 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQLWRKV*AHNRDL
Trigger: CAGGTCACGATTATGGGCCCACACCTTCCTCCAGAG...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TATTCTAAAGGGCAGAGGGCCACTGCGTGCATGCGCGTGTGTACAACGGCCTTCTCAGAGAGAGCTGTCTaGCATCGCTCACATCACATC +
Preference number: 4 (lower is better)
Translates to: YSKGQRATACMRVCTTAFSERAV*HRSHHI
Trigger: GATGTGATGTGAGCGATGCCAGACAGCTCTCTCTGA...GAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TATTCTAAAGGGCAGAGGGCCACTGCGTGCATGCGCGTGTGTACAACGGCCTTCATTCAGGGCATTACCTaGGGTCAGAGAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: YSKGQRATACMRVCTTAFIQGIT*GQRELS
Trigger: AGACAGCTCTCTCTGACCCCAGGTAATGCCCTGAAT...GAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTGGCAGAACGGATTGCTaGAAGGTTTGCCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: ACACVQRPSAIPIGSSACGRTDC*KVCLTS
Trigger: TGAGGTCAGGCAAACCTTCCAGCAATCCGTTCTGCC...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTGGATCTGGGGGTCTCTaGAGAGGAGAGAGCTCACTT +
Preference number: 4 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIGSGGL*RGESSL
Trigger: AAGTGAGCTCTCTCCTCTTCAGAGACCCCCAGATCC...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGCCCCAGAGGCTGGTGTaGACACCCCTTAATTCTTTG +
Preference number: 4 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQPQRLV*TPLNSL
Trigger: CAAAGAATTAAGGGGTGTCCACACCAGCCTCTGGGG...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTTCGGTCATGTCCTCCTaGGGAGGTCTGGCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPSVMSS*GGLALS
Trigger: TGACAGAGCCAGACCTCCTCAGGAGGACATGACCGA...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTCTGGCGGTCCCCAGCTaGCCGTGTCCCGGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGILAVPS*PCPGSV
Trigger: CACCGACCCGGGACACGGGCAGCTGGGGACCGCCAG...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TATTCTAAAGGGCAGAGGGCCACTGCGTGCATGCGCGTGTGTACAACGGCCTTCGTGAGCTTTCACTGTTaGTCCAAACCACTGATTGGA +
Preference number: 4 (lower is better)
Translates to: YSKGQRATACMRVCTTAFVSFHC*SKPLIG
Trigger: TCCAATCAGTGGTTTGGAGCAACAGTGAAAGCTCAC...GAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TATTCTAAAGGGCAGAGGGCCACTGCGTGCATGCGCGTGTGTACAACGGCCTTCGCTGAAGTTCTGAATTaGTACATAGCAGGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: YSKGQRATACMRVCTTAFAEVLN*YIAGAN
Trigger: GTTGGCACCTGCTATGTAGCAATTCAGAACTTCAGC...GAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTATGGGCAGAACAATCTaGGGAGGGTGTGACACTCCT +
Preference number: 4 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIMGRTI*GGCDTP
Trigger: AGGAGTGTCACACCCTCCGCAGATTGTTCTGCCCAT...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTACAAGTGTGAGTCACTaGACCCAGACTTTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: ACACVQRPSAIPIGSSACTSVSH*TQTLLP
Trigger: TGGAAGCAAAGTCTGGGTGCAGTGACTCACACTTGT...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TATTCTAAAGGGCAGAGGGCCACTGCGTGCATGCGCGTGTGTACAACGGCCTTCAAGATTGATAATCATTaGGTGCAGCAGAAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: YSKGQRATACMRVCTTAFKIDNH*VQQKLG
Trigger: GCCCAGCTTCTGCTGCACCCAATGATTATCAATCTT...GAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTGAGACTCTGGGATGGTTTCTGGGAGTTTTGCTaGCTGATCTGTATAAGGCAT +
Preference number: 4 (lower is better)
Translates to: EGARPSRKGPSWLRLWDGFWEFC*LICIRH
Trigger: ATGCCTTATACAGATCAGCCAGCAAAACTCCCAGAA...ACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TATTCTAAAGGGCAGAGGGCCACTGCGTGCATGCGCGTGTGTACAACGGCCTTCTTCCTTCACCAATGTTaGCTTAAAGACAAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: YSKGQRATACMRVCTTAFFLHQC*LKDKGC
Trigger: GCACCCCTTGTCTTTAAGCCAACATTGGTGAAGGAA...GAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGTGGTGCAGTTCACTTTaGAGCCCTCATGCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQWCSSL*SPHALL
Trigger: AAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCA...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTAATCTGCGGAGGGTGTaGCACTCCTCTTATTTCCAC +
Preference number: 4 (lower is better)
Translates to: LRLWDGAVHFGALMPCFINLRRV*HSSYFH
Trigger: GTGGAAATAAGAGGAGTGTCACACCCTCCGCAGATT...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTCAAGACTATTGTGTTTaGAATGCTCTGGCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: ACACVQRPSAIPIGSSACQDYCV*NALACD
Trigger: GTCACAGGCCAGAGCATTGCAAACACAATAGTCTTG...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTGTGCCAGTGAGGATCTaGGGGTCTCTGAAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPVPVRI*GSLKRR
Trigger: TCTCCTCTTCAGAGACCCCCAGATCCTCACTGGCAC...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CAA 72 bp TTCTCTGTCGTCAGTATGTTCTCTGGGCAGAACGGATaGCTGGAAGGTTTGCCTGACCTCAGTTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FSVVSMFSGQNG*LEGLPDLSFLP
Trigger: AGGGAGGAAACTGAGGTCAGGCAAACCTTCCAGCAATCCGTTCTGCCCAGAGAACATACTGACGACAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TATTCTAAAGGGCAGAGGGCCACTGCGTGCATGCGCGTGTGTACAACGGCCTTCTCTCCCGTGAAATTCTaGATAAACGTCATATCCGTA +
Preference number: 4 (lower is better)
Translates to: YSKGQRATACMRVCTTAFSPVKF*INVISV
Trigger: TACGGATATGACGTTTATTCAGAATTTCACGGGAGA...GAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTGGTATCTGCCTGCACTaGGCAGACCCCTCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGIGICLH*ADPSAG
Trigger: GCCCGCGGAGGGGTCTGCGCAGTGCAGGCAGATACC...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTTTCCATAAAGAGAGGTaGCCCAACCAGGACATCATC +
Preference number: 4 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIFHKER*PNQDII
Trigger: GATGATGTCCTGGTTGGGGCACCTCTCTTTATGGAA...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGTTGATAATCATTGGGTaGAGCAGAAGCTGGGCATCT +
Preference number: 4 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQLIIIG*SRSWAS
Trigger: AGATGCCCAGCTTCTGCTGCACCCAATGATTATCAA...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTGAGTTCAGCTTCATATaGTCCTTCCCCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: ACACVQRPSAIPIGSSACEFSFI*SFPFIS
Trigger: AGAAATGAAGGGGAAGGAGCATATGAAGCTGAACTC...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTGAGACTCTGGGATGGTAAGCTAAGGTTAAAATaGCGAGAACCAACAATCCAA +
Preference number: 4 (lower is better)
Translates to: EGARPSRKGPSWLRLWDGKLRLK*REPTIQ
Trigger: TTGGATTGTTGGTTCTCGCCATTTTAACCTTAGCTT...ACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTGCTGAGACTCTGGGATaGTGCAGTTCACTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPAETLG*CSSLWS
Trigger: GCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAGC...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CAA 72 bp AGTATGTTCTCTGGGCAGAACGGATTGCTGGAAGGTTaGCCTGACCTCAGTTTCCTCCCTTTCTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: SMFSGQNGLLEG*PDLSFLPFSIC
Trigger: GCAAATGGAGAAAGGGAGGAAACTGAGGTCAGGCAAACCTTCCAGCAATCCGTTCTGCCCAGAGAACATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACATCCAGGTTGAACGCCTaGCAGGCGGGGGACCACAGC +
Preference number: 4 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTSRLNA*QAGDHS
Trigger: GCTGTGGTCCCCCGCCTGTCAGGCGTTCAACCTGGA...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTATGAGTAATTTGCAATaGTATCTGCAACACTGGCAG +
Preference number: 4 (lower is better)
Translates to: ACACVQRPSAIPIGSSACMSNLQ*YLQHWQ
Trigger: CTGCCAGTGTTGCAGATATCATTGCAAATTACTCAT...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTCTTCCTGACAAGATaGGGAATAGTAGAGTTTCGC +
Preference number: 4 (lower is better)
Translates to: LRLWDGAVHFGALMPCFILFLTR*GIVEFR
Trigger: GCGAAACTCTACTATTCCTCATCTTGTCAGGAAGAG...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTAAAGTGCGGTGTAGATaGGGTGATGTTTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPKVRCR*GDVSRV
Trigger: GACCCTGGAAACATCACCTCATCTACACCGCACTTT...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTAGAAGCTCTGCTAAATaGGTTATCTGCACACAGTGG +
Preference number: 4 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIRSSAK*VICTQW
Trigger: CCACTGTGTGCAGATAACTCATTTAGCAGAGCTTCT...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTTCCTTCTGGGAGTTTTaGTGGCTGATCTGTATAAGG +
Preference number: 4 (lower is better)
Translates to: LRLWDGAVHFGALMPCFISFWEF*WLICIR
Trigger: CCTTATACAGATCAGCCAGCAAAACTCCCAGAAGGA...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTTTGAGGCAACTTCAGTaGTCATCCGTAGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPLRQLQ*SSVVSH
Trigger: GTGGCTGACTACGGATGAGCACTGAAGTTGCCTCAA...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGGAACTTGGGAAGGCTTaGTGTTTAAGCCATCTTTGT +
Preference number: 4 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQELGKA*CLSHLC
Trigger: ACAAAGATGGCTTAAACACCAAGCCTTCCCAAGTTC...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTTACCTGATGCTTATCTaGTCTAGCCGACAGCTTCAA +
Preference number: 4 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIYLMLI*SSRQLQ
Trigger: TTGAAGCTGTCGGCTAGACCAGATAAGCATCAGGTA...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTGCAACCAATTCTTGCTaGGAATCCCCAGTAAACTCC +
Preference number: 4 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPATNSC*ESPVNS
Trigger: GGAGTTTACTGGGGATTCTCAGCAAGAATTGGTTGC...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTGATTTTCATCTCCAATaGTTACCTGATGCTTATCTG +
Preference number: 4 (lower is better)
Translates to: ACACVQRPSAIPIGSSACDFHLQ*LPDAYL
Trigger: CAGATAAGCATCAGGTAATCATTGGAGATGAAAATC...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGTTCCTTCCAGGTATCTaGATAAACTATCTCAACAGG +
Preference number: 4 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQFLPGI*INYLNR
Trigger: CCTGTTGAGATAGTTTATGCAGATACCTGGAAGGAA...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAACAGAGGGCCACTGCGTaGATGCGCGTGTGTACAACG +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKEQRATA*MRVCTT
Trigger: CGTTGTACACACGCGCATGCACGCAGTGGCCCTCTG...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTATTCTGTGCTCCTCTTaGAATTCCAGCAACCAATTC +
Preference number: 4 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIILCSS*NSSNQF
Trigger: GAATTGGTTGCTGGAATTCCAAGAGGAGCACAGAAT...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCAAAAGGCACTCCGATaGCAATGTCATTGTATCCAT +
Preference number: 4 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIQKALR*QCHCIH
Trigger: ATGGATACAATGACATTGCCATCGGAGTGCCTTTTG...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTGTGTTTGCAATGCTCTaGCCTGTGACAGATGCACAT +
Preference number: 4 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPVFAML*PVTDAH
Trigger: ATGTGCATCTGTCACAGGCCAGAGCATTGCAAACAC...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTTCCAAATTCTCTAGATaGCAGATTCTCAACCTAGAG +
Preference number: 4 (lower is better)
Translates to: LRLWDGAVHFGALMPCFISKFSR*QILNLE
Trigger: CTCTAGGTTGAGAATCTGTCATCTAGAGAATTTGGA...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAACACACAAACCAGCCTTaGGCTCCTGACCGACCCGAA +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKEHTNQP*APDRPE
Trigger: TTCGGGTCGGTCAGGAGCTCAAGGCTGGTTTGTGTG...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACACAAACGGTATCTGCCTaGACTGCGCAGACCCCTCCG +
Preference number: 4 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTQTVSA*TAQTPP
Trigger: CGGAGGGGTCTGCGCAGTGCAGGCAGATACCGTTTG...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTCTACTTCTCTGGGGTTaGTCTCAAATTCACGTTCCA +
Preference number: 4 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPLLLWG*SQIHVP
Trigger: TGGAACGTGAATTTGAGAGCAACCCCAGAGAAGTAG...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTGCAGGCTCACAAAATTaGTGTCTGGATTGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPAGSQN*CLDCPC
Trigger: ACAAGGACAATCCAGACAGCAATTTTGTGAGCCTGC...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTGGGCCACTGCGTGCATaGGCGTGTGTACAACGGCCT +
Preference number: 4 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVGPLRA*ACVQRP
Trigger: AGGCCGTTGTACACACGCGCATGCACGCAGTGGCCC...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAATCCACGATATCGGGCTaGCTGGTGTTGGCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKESTISG*LVLALG
Trigger: GCCCAAAGCCAACACCAGCCAGCCCGATATCGTGGA...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGAGATGTCATAGAGTCTaGAACCTGGCAAGTTTTATT +
Preference number: 4 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQRCHRV*NLASFI
Trigger: AATAAAACTTGCCAGGTTCCAGACTCTATGACATCT...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTATATTAGGATTTGGTTaGCACTGCAGAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPILGFG*HCRGPR
Trigger: TCTGGGACCTCTGCAGTGCCAACCAAATCCTAATAT...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTAGGCTTTATATCCTGTaGATTGATATTAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: ACACVQRPSAIPIGSSACRLYIL*IDIRIW
Trigger: CCAAATCCTAATATCAATCCACAGGATATAAAGCCT...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTTATGCTGGATTGATCTaGACTGCAACTTACGTTCCC +
Preference number: 4 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPYAGLI*TATYVP
Trigger: GGGAACGTAAGTTGCAGTCCAGATCAATCCAGCATA...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTGTAAACTTAAGGATTTaGGTCAGCTTGTTCTATCAT +
Preference number: 4 (lower is better)
Translates to: ACACVQRPSAIPIGSSACVNLRI*VSLFYH
Trigger: ATGATAGAACAAGCTGACCCAAATCCTTAAGTTTAC...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACAGGCCGCTGTACACTGTaGGCTTTTCCACGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTGRCTL*AFPRPG
Trigger: ACCTGGACGTGGAAAAGCTCACAGTGTACAGCGGCC...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGTCCCAGTTTGGCTCATaGCTGTATAATTTTATGTTT +
Preference number: 4 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQSQFGS*LYNFMF
Trigger: AAACATAAAATTATACAGGCATGAGCCAAACTGGGA...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAACTCCCCAGCAGCAACTaGGTATCCAAGGTAACTGTC +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKELPSSN*VSKVTV
Trigger: GACAGTTACCTTGGATACTCAGTTGCTGCTGGGGAG...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTTTCGCAAAAAGGCGCTaGGCTCAGGGGTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVFAKRR*AQGCPL
Trigger: CAGAGGACACCCCTGAGCTCAGCGCCTTTTTGCGAA...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTCTTTCAAACAAAGCGTaGTTGTTGAAATCAGGACAC +
Preference number: 4 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPLSNKA*LLKSGH
Trigger: GTGTCCTGATTTCAACAATCACGCTTTGTTTGAAAG...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTATTTGCAATGATATCTaGAACACTGGCAGTGATCAC +
Preference number: 4 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPICNDI*NTGSDH
Trigger: GTGATCACTGCCAGTGTTGCAGATATCATTGCAAAT...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAAGTCCCCTCCATTTCCTaGGTCACTGTCAGGTATCAG +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKEVPSIS*VTVRYQ
Trigger: CTGATACCTGACAGTGACCCAGGAAATGGAGGGGAC...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACACTGCAACACTGGCAGTaGTCACTTGTCCTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTLQHWQ*SLVLAS
Trigger: ACTGGCAAGGACAAGTGATCACTGCCAGTGTTGCAG...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTCTTCCGGATCAGCATTaGTGTTCCGGCAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGILPDQH*CSGKER
Trigger: TCTCTCCTTGCCGGAACAGCAATGCTGATCCGGAAG...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAATCTTTGATCCTTGCCTaGAAAAGGCACTCCGATGGC +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKESLILA*KRHSDG
Trigger: GCCATCGGAGTGCCTTTTGCAGGCAAGGATCAAAGA...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAATGCCTCTTTGATCCTTaGCTGCAAAAGGCACTCCGA +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKECLFDP*LQKALR
Trigger: TCGGAGTGCCTTTTGCAGGCAAGGATCAAAGAGGCA...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTGAGGCCCACACTCCTTaGAGAACTTGGGAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVEAHTP*RTWEGL
Trigger: CAAGCCTTCCCAAGTTCTGCAAGGAGTGTGGGCCTC...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTGAAATCCCTTGTTGTTaGGTTCGATTCCAACATAAT +
Preference number: 4 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPEIPCC*VRFQHN
Trigger: ATTATGTTGGAATCGAACGCAACAACAAGGGATTTC...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACAGGAGCCCTCATGCCTTaGTTCATTCTGGGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTGALMP*FILGLS
Trigger: ACTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCC...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACAGGGATTACAGGAGACTaGCACCACGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTGITGD*HHAQLI
Trigger: AATTAGCTGGGCGTGGTGGCAGTCTCCTGTAATCCC...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTAAGCGATTCTCTCTCTaGCTCAGCCTCCTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGIKRFSL*LSLLGS
Trigger: GCTACCTAGGAGGCTGAGGCAGAGAGAGAATCGCTT...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAAGATTGCTGGAAGGTTTaGCTGACCTCAGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKEDCWKV*LTSVSS
Trigger: GGAGGAAACTGAGGTCAGGCAAACCTTCCAGCAATC...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAAACTCGGCATAGGCGCTaGAGTTCTGAATTGCTACAT +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKETRHRR*SSELLH
Trigger: ATGTAGCAATTCAGAACTTCAGCGCCTATGCCGAGT...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTGTCATCATAGGAAGCTaGAGCCACTTCCGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGIVIIGS*SHFRLL
Trigger: AAGCAGACGGAAGTGGCTCCAGCTTCCTATGATGAC...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAATTAAGAGTTCTCCAGTaGTATAAAGGAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKELRVLQ*YKGAQA
Trigger: GGCCTGTGCTCCTTTATATCACTGGAGAACTCTTAA...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTCAATGCTCTGGCCTGTaGCAGATGCACATACTCTTA +
Preference number: 4 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGIQCSGL*QMHILL
Trigger: TAAGAGTATGTGCATCTGTCACAGGCCAGAGCATTG...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACACAGTCCACCAGAATGTaGGCCTGTTCACTAACAATG +
Preference number: 4 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTQSTRM*ACSLTM
Trigger: CATTGTTAGTGAACAGGCTCACATTCTGGTGGACTG...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAATCTCCAATGATTACCTaGTGCTTATCTGGTCTAGCC +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKESPMIT*CLSGLA
Trigger: GGCTAGACCAGATAAGCATCAGGTAATCATTGGAGA...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTATCTTCCACAATTGCTaGTGGCTTCTCCAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGIIFHNC*WLLQLW
Trigger: CCAAAGCTGGAGAAGCCATCAGCAATTGTGGAAGAT...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAACAACTTATGCTGGATTaGTCTGGACTGCAACTTACG +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKEQLMLD*SGLQLT
Trigger: CGTAAGTTGCAGTCCAGATCAATCCAGCATAAGTTG...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTTTGCTACATAGCAGGTaGCAACTGGGTCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGILLHSR*QLGPFL
Trigger: CAGAAAAGGACCCAGTTGGCACCTGCTATGTAGCAA...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAACATCTCTGCAACTTATaGTGGATTGATCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKEHLCNL*WIDLDC
Trigger: GCAGTCCAGATCAATCCAGCATAAGTTGCAGAGATG...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTGCGTGCTCGTCCATGTaGCTTTCATTTGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVACSSM*LSFAPQ
Trigger: TTGAGGAGCAAATGAAAGGCACATGGACGAGCACGC...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAAACTGCACCCAGACTTTaGTTCCATATTCTAAAGGGC +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKETAPRL*FHILKG
Trigger: GCCCTTTAGAATATGGAAGCAAAGTCTGGGTGCAGT...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTCGTCAGTATGTTCTCTaGGCAGAACGGATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVRQYVL*AERIAG
Trigger: TCCAGCAATCCGTTCTGCCCAGAGAACATACTGACG...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTTCTGGTTCCCAGTTATaGATGGGCAGAACAATCTGC +
Preference number: 4 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVSGSQL*MGRTIC
Trigger: GCAGATTGTTCTGCCCATTCATAACTGGGAACCAGA...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTCCAGGATGGTGTCACTaGTGGTACTTGGTCCAATAT +
Preference number: 4 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVPGWCH*WYLVQY
Trigger: ATATTGGACCAAGTACCATCAGTGACACCATCCTGG...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAAGCACATTATGAATTATaGAGGCAATCGGCAATGCTC +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKEAHYEL*RQSAML
Trigger: GAGCATTGCCGATTGCCTTCATAATTCATAATGTGC...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACATGGATTGATCTGGACTaGAACTTACGTTCCCATACG +
Preference number: 4 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTWIDLD*NLRSHT
Trigger: CGTATGGGAACGTAAGTTGCAGTCCAGATCAATCCA...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTTCTTTCTGTTGTTGGTaGTGTCAAACGGTATCTGCC +
Preference number: 4 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGISFCCW*CQTVSA
Trigger: GGCAGATACCGTTTGACACCACCAACAACAGAAAGA...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTTTTGCCCTACTTCTCTaGGGTTGCTCTCAAATTCAC +
Preference number: 4 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGIFALLL*GCSQIH
Trigger: GTGAATTTGAGAGCAACCCCAGAGAAGTAGGGCAAA...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAACACACACCACCATCCTaGTTACATTTTCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKEHTPPS*LHFPSC
Trigger: ACAAGATGGAAAATGTAACCAGGATGGTGGTGTGTG...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CAA 72 bp ATGTTTCTTTTCCATAGGGAGGTGTCAAATGTTCCATaGGATACAGTAGTGTTGGATGGTGTGGTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: MFLFHREVSNVP*DTVVLDGVVLV
Trigger: AACTAAGACCACACCATCCAACACTACTGTATCCAATGGAACATTTGACACCTCCCTATGGAAAAGAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAAATCACTGTTAACATCTaGTACGACAACGGTATATCC +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKEITVNI*YDNGIS
Trigger: GGATATACCGTTGTCGTATCAGATGTTAACAGTGAT...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTGAGCACAGCACATTATaGATTATGAAGGCAATCGGC +
Preference number: 4 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVEHSTL*IMKAIG
Trigger: GCCGATTGCCTTCATAATTCATAATGTGCTGTGCTC...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAATTTTCCTGTTCCAAATaGACCCACAATCAAATCTGG +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKEFSCSK*THNQIW
Trigger: CCAGATTTGATTGTGGGTGCATTTGGAACAGGAAAA...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACATTCAGGGAATCTAATTaGACCTCTGCCATCAAGACT +
Preference number: 4 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTFRESN*TSAIKT
Trigger: AGTCTTGATGGCAGAGGTGCAATTAGATTCCCTGAA...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAACACAAAATTGCTGTCTaGATTGTCCTTGTTGGAACT +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKEHKIAV*IVLVGT
Trigger: AGTTCCAACAAGGACAATCCAGACAGCAATTTTGTG...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACAAATATGTTCCACCAATaGTCCAACCTCCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTNMFHQ*SNLLLF
Trigger: AAAGAGGAGGAGGTTGGACCATTGGTGGAACATATT...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTGTCACTGATGGTACTTaGTCCAATATTGTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVVTDGT*SNIVQL
Trigger: GAGCTGCACAATATTGGACCAAGTACCATCAGTGAC...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACAATTGATATTAGGATTTaGTTGGCACTGCAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTIDIRI*LALQRS
Trigger: GGACCTCTGCAGTGCCAACCAAATCCTAATATCAAT...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTCTCTGCAACTTATGCTaGATTGATCTGGACTGCAAC +
Preference number: 4 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVLCNLC*IDLDCN
Trigger: GTTGCAGTCCAGATCAATCCAGCATAAGTTGCAGAG...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAATACAGTAGTGTTGGATaGTGTGGTCTTAGTTCTAAG +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKEYSSVG*CGLSSK
Trigger: CTTAGAACTAAGACCACACCATCCAACACTACTGTA...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTATCACATCCTGTAGATaGCCACCTACTTGTAAAACC +
Preference number: 4 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGIITSCR*PPTCKT
Trigger: GGTTTTACAAGTAGGTGGCCATCTACAGGATGTGAT...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTTATTGCTTGTCTCCCTaGGCCATAATGTCCTTAGAA +
Preference number: 4 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVYCLSP*AIMSLE
Trigger: TTCTAAGGACATTATGGCTCAGGGAGACAAGCAATA...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAATTCTTAGGAGGAAACTaGGTGAGTGATTTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKEFLGGN*VSDFEN
Trigger: GTTTTCAAAATCACTCACTCAGTTTCCTCCTAAGAA...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAAATATCCAAAATAAGATaGCATCTGTTCTCCCGTGAA +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKEISKIR*HLFSRE
Trigger: TTCACGGGAGAACAGATGGCATCTTATTTTGGATAT...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR GCA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAACAGACATTTCATCTCTaGAACTTATGCTGGATTGAT +
Preference number: 4 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKEQTFHL*NLCWID
Trigger: ATCAATCCAGCATAAGTTGCAGAGATGAAATGTCTG...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTTCATTGTATCCATCTTaGTTCAGGTCTCCTAAGTGT +
Preference number: 4 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGISLYPS*FRSPKC
Trigger: ACACTTAGGAGACCTGAACCAAGATGGATACAATGA...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTAAAACCAGCTCTACCTaGAAGACTAACACCAAAGAC +
Preference number: 4 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVKTSST*KTNTKD
Trigger: GTCTTTGGTGTTAGTCTTCCAGGTAGAGCTGGTTTT...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
3UTR CAA 72 bp TCCTTTCAAAAGTACTTTCACAGTACCAACAACATATaGCTTGTCTCCCTGAGCCATAATGTCCTTAGAAAT +
Preference number: 4 (lower is better)
Translates to: SFQKYFHSTNNI*LVSLSHNVLRN
Trigger: ATTTCTAAGGACATTATGGCTCAGGGAGACAAGCAATATGTTGTTGGTACTGTGAAAGTACTTTTGAAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR TCA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTGGTATCAGAAAGCTTTaGTTTTTAACCCTCATGTTC +
Preference number: 4 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGIGIRKL*FLTLMF
Trigger: GAACATGAGGGTTAAAAATCAAAGCTTTCTGATACC...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTTTGGAACTTCTGATTTaGAGATCGAAGTTAATGCTC +
Preference number: 4 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGILELLI*RSKLML
Trigger: GAGCATTAACTTCGATCTCCAAATCAGAAGTTCCAA...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CCA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACAACCCACAATCAAATCTaGGTAATCATTCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTTHNQI*VIILVY
Trigger: ATAGACAAGAATGATTACCCAGATTTGATTGTGGGT...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTGAGACTCTGGGATGGTTCGGGCTGGCTGGTGTaGGCTTTGGGCGCCCCCACC +
Preference number: 5 (lower is better)
Translates to: EGARPSRKGPSWLRLWDGSGWLV*ALGAPT
Trigger: GGTGGGGGCGCCCAAAGCCAACACCAGCCAGCCCGA...ACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 90 bp AAGGACAGTAATAGACGGCTCCCCCTTCCACGATATCGGGCTGGCTaGTGTTGGCTTTGGGCGCCCCCACCAAGACACTCGCTGTGCGGG +
Preference number: 5 (lower is better)
Translates to: KDSNRRLPLPRYRAG*CWLWAPPPRHSLCG
Trigger: CCCGCACAGCGAGTGTCTTGGTGGGGGCGCCCAAAGCCAACACCAGCCAGCCCGATATCGTGGAAGGGGGAGCCGTCTATTACTGTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCAGATATTAGGATTTGGTaGGCACTGCAGAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: GSSACGQVEGARPSRKGPDIRIW*ALQRSQ
Trigger: CTGGGACCTCTGCAGTGCCAACCAAATCCTAATATC...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGTGGCTGGTGTTGGCTTaGGGCGCCCCCACCAAGACA +
Preference number: 5 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQWLVLA*GAPTKT
Trigger: TGTCTTGGTGGGGGCGCCCAAAGCCAACACCAGCCA...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCAACTGGCAGTGATCACTaGTCCTTGCCAGTAGAAACT +
Preference number: 5 (lower is better)
Translates to: GSSACGQVEGARPSRKGPTGSDH*SLPVET
Trigger: AGTTTCTACTGGCAAGGACAAGTGATCACTGCCAGT...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTGAGACTCTGGGATGGTTGGAGCCCTCATGCCTaGCTTCATTCTGGGTCTCAG +
Preference number: 5 (lower is better)
Translates to: EGARPSRKGPSWLRLWDGWSPHA*LHSGSQ
Trigger: CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCA...ACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCACACTGCACCCAGACTTaGCTTCCATATTCTAAAGGG +
Preference number: 5 (lower is better)
Translates to: GSSACGQVEGARPSRKGPHCTQT*LPYSKG
Trigger: CCCTTTAGAATATGGAAGCAAAGTCTGGGTGCAGTG...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCAACTCTGATCTTTCTGTaGTTGGTGGTGTCAAACGGT +
Preference number: 5 (lower is better)
Translates to: GSSACGQVEGARPSRKGPTLIFL*LVVSNG
Trigger: ACCGTTTGACACCACCAACAACAGAAAGATCAGAGT...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCCAGCAACCAATTCTaGCTGAGAATCCCCAGTAAA +
Preference number: 5 (lower is better)
Translates to: GSSACGQVEGARPSRKGPSSNQF*LRIPSK
Trigger: TTTACTGGGGATTCTCAGCAAGAATTGGTTGCTGGA...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCAGAACTTGGGAAGGCTaGGTGTTTAAGCCATCTTTG +
Preference number: 5 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGRTWEG*VFKPSL
Trigger: CAAAGATGGCTTAAACACCAAGCCTTCCCAAGTTCT...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCCTGTCTGGATTGTCCTaGTTGGAACTTCTGATTTGG +
Preference number: 5 (lower is better)
Translates to: VPVGRWKVPVPLGKGHLGLSGLS*LELLIW
Trigger: CCAAATCAGAAGTTCCAACAAGGACAATCCAGACAG...GCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp TATTCTAAAGGGCAGAGGGCCACTGCGTGCATGCGCGTGTGTACAACGGCCTTCTCTGGGCAGAACGGATaGCTGGAAGGTTTGCCTGAC +
Preference number: 5 (lower is better)
Translates to: YSKGQRATACMRVCTTAFSGQNG*LEGLPD
Trigger: GTCAGGCAAACCTTCCAGCAATCCGTTCTGCCCAGA...GAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp TATTCTAAAGGGCAGAGGGCCACTGCGTGCATGCGCGTGTGTACAACGGCCTTCAGTGATCACTTGTCCTaGCCAGTAGAAACTCCCAGG +
Preference number: 5 (lower is better)
Translates to: YSKGQRATACMRVCTTAFSDHLS*PVETPR
Trigger: CCTGGGAGTTTCTACTGGCAAGGACAAGTGATCACT...GAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp TATTCTAAAGGGCAGAGGGCCACTGCGTGCATGCGCGTGTGTACAACGGCCTTCCCTACTTCTCTGGGGTaGCTCTCAAATTCACGTTCC +
Preference number: 5 (lower is better)
Translates to: YSKGQRATACMRVCTTAFPTSLG*LSNSRS
Trigger: GGAACGTGAATTTGAGAGCAACCCCAGAGAAGTAGG...GAAGGCCGTTGTACACACGCGCATGCACGCAGTGGCCCTCTGCCCTTTAGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GAAGGTGCCCGTCCCTCTAGGAAAGGGCCATCTTGGCTGAGACTCTGGGATGGTTGCAGGCTCACAAAATaGCTGTCTGGATTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: EGARPSRKGPSWLRLWDGCRLTK*LSGLSL
Trigger: CAAGGACAATCCAGACAGCAATTTTGTGAGCCTGCA...ACCATCCCAGAGTCTCAGCCAAGATGGCCCTTTCCTAGAGGGACGGGCACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GGTAGCAGTGCCTGTGGGCAGGTGGAAGGTGCCCGTCCCTCTAGGAAAGGGCCATTAGTGTCTGTGAGCTaGGCTCATCTTTCAAACAAA +
Preference number: 5 (lower is better)
Translates to: GSSACGQVEGARPSRKGPLVSVS*AHLSNK
Trigger: TTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAA...TGGCCCTTTCCTAGAGGGACGGGCACCTTCCACCTGCCCACAGGCACTGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS GCA 90 bp GTTCCGGCAAGGAGAGAACTCGGCATAGGCGCTGAAGTTCTGAATTaGTACATAGCAGGTGCCAACTGGGTCCTTTTCTGGTGTCGGTTT +
Preference number: 5 (lower is better)
Translates to: VPARRELGIGAEVLN*YIAGANWVLFWCRF
Trigger: AAACCGACACCAGAAAAGGACCCAGTTGGCACCTGCTATGTAGCAATTCAGAACTTCAGCGCCTATGCCGAGTTCTCTCCTTGCCGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCAGACTAAATCCTGCTaGGCAGTAACCCTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIQTKSC*AVTLAF
Trigger: GAAGGCCAGGGTTACTGCCAAGCAGGATTTAGTCTG...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTCCGATGGCAATGTCATaGTATCCATCTTGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: ACACVQRPSAIPIGSSACPMAMS*YPSWFR
Trigger: CCTGAACCAAGATGGATACAATGACATTGCCATCGG...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCATGCCTCAGGGGTCTaGTCATTTGTCAGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIHASGV*SFVSCS
Trigger: GGAACAGCTGACAAATGACAAGACCCCTGAGGCATG...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTATGGTGCAGTTCACTTaGGAGCCCTCATGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIMVQFT*EPSCLA
Trigger: AGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCAT...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS TCA 90 bp GATCAGCATTGCTGTTCCGGCAAGGAGAGAACTCGGCATAGGCGCTaGAGTTCTGAATTGCTACATAGCAGGTGCCAACTGGGTCCTTTT +
Preference number: 5 (lower is better)
Translates to: DQHCCSGKERTRHRR*SSELLHSRCQLGPF
Trigger: AAAAGGACCCAGTTGGCACCTGCTATGTAGCAATTCAGAACTTCAGCGCCTATGCCGAGTTCTCTCCTTGCCGGAACAGCAATGCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS TCA 90 bp CATCCCGGGCAGAGAAAGGCCAGCCCACCTCCAGGATGGTGTCACTaGTGGTACTTGGTCCAATATTGTGCAGCTCATAAATATGTTCCA +
Preference number: 5 (lower is better)
Translates to: HPGQRKASPPPGWCH*WYLVQYCAAHKYVP
Trigger: TGGAACATATTTATGAGCTGCACAATATTGGACCAAGTACCATCAGTGACACCATCCTGGAGGTGGGCTGGCCTTTCTCTGCCCGGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCAGTCACAACCGGTCTaGCTCTGTAAACAGCGACTT +
Preference number: 5 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIQSQPV*LCKQRL
Trigger: AAGTCGCTGTTTACAGAGCAAGACCGGTTGTGACTG...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGCTGCCATCAAGACTATaGTGTTTGCAATGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQLPSRL*CLQCSG
Trigger: GCCAGAGCATTGCAAACACAATAGTCTTGATGGCAG...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTTTACCCATAATGGGATaGAGAAGGAAACATTCGGAG +
Preference number: 5 (lower is better)
Translates to: ACACVQRPSAIPIGSSACLPIMG*RRKHSE
Trigger: CTCCGAATGTTTCCTTCTCAATCCCATTATGGGTAA...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGGCAACTTATGCTGGATaGATCTGGACTGCAACTTAC +
Preference number: 5 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQATYAG*IWTATY
Trigger: GTAAGTTGCAGTCCAGATCAATCCAGCATAAGTTGC...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGAGTACCAACAACATATaGCTTGTCTCCCTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQSTNNI*LVSLSH
Trigger: ATGGCTCAGGGAGACAAGCAATATGTTGTTGGTACT...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GCATGCGCGTGTGTACAACGGCCTTCTGCAATTCCCATAGGTAGCAGTGCCTGTAACTCGATAGGTTCTTaGGTTCCATTAACTCTGATC +
Preference number: 5 (lower is better)
Translates to: ACACVQRPSAIPIGSSACNSIGS*VPLTLI
Trigger: GATCAGAGTTAATGGAACCAAAGAACCTATCGAGTT...ACAGGCACTGCTACCTATGGGAATTGCAGAAGGCCGTTGTACACACGCGCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTGAGGAGAGAGCTCACTaGCAAATACAGGTAGATTTG +
Preference number: 5 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIEERAH*QIQVDL
Trigger: CAAATCTACCTGTATTTGCAAGTGAGCTCTCTCCTC...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGGTTACATTTTCCATCTaGTACTCACAGCTCAGTGGT +
Preference number: 5 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQVTFSI*YSQLSG
Trigger: ACCACTGAGCTGTGAGTACAAGATGGAAAATGTAAC...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTGCTACAGCAGTGATGTaGATTTGCAGGCTCACAAAA +
Preference number: 5 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIATAVM*ICRLTK
Trigger: TTTTGTGAGCCTGCAAATCAACATCACTGCTGTAGC...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTGAAAATCTTCCACAATaGCTGATGGCTTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIENLPQ*LMASPA
Trigger: AGCTGGAGAAGCCATCAGCAATTGTGGAAGATTTTC...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp GGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTCTGGGTCTCAGTTGGATACAGTAGTGTaGGATGGTGTGGTCTTAGTT +
Preference number: 5 (lower is better)
Translates to: GWCSSLWSPHALLHSGSQLDTVV*DGVVLV
Trigger: AACTAAGACCACACCATCCAACACTACTGTATCCAA...CTGAGACCCAGAATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS TCA 90 bp GCACCTCTGCCATCAAGACTATTGTGTTTGCAATGCTCTGGCCTGTaGCAGATGCACATACTCTTAAAGAAAAGCAGGCAGCAGATGTCA +
Preference number: 5 (lower is better)
Translates to: APLPSRLLCLQCSGL*QMHILLKKSRQQMS
Trigger: TGACATCTGCTGCCTGCTTTTCTTTAAGAGTATGTGCATCTGTCACAGGCCAGAGCATTGCAAACACAATAGTCTTGATGGCAGAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS GCA 90 bp TCCCACAATAAGGTCTCCATTCTTATAAAAATCCAGACTAAATCCTaGTTGGCAGTAACCCTGGCCTTCCGGATCAGCATTGCTGTTCCG +
Preference number: 5 (lower is better)
Translates to: SHNKVSILIKIQTKS*LAVTLAFRISIAVP
Trigger: CGGAACAGCAATGCTGATCCGGAAGGCCAGGGTTACTGCCAAGCAGGATTTAGTCTGGATTTTTATAAGAATGGAGACCTTATTGTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 90 bp CATTTGTCAGCTGTTCCCTGTCGGTCATGTCCTCCTGAGGAGGTCTaGCTCTGTCAAAGAATCCACACTTCCATAAAGCTAAGGTTAAAA +
Preference number: 5 (lower is better)
Translates to: HLSAVPCRSCPPEEV*LCQRIHTSIKLRLK
Trigger: TTTTAACCTTAGCTTTATGGAAGTGTGGATTCTTTGACAGAGCCAGACCTCCTCAGGAGGACATGACCGACAGGGAACAGCTGACAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp CTGAGACTCTGGGATGGTGCAGTTCACTTTGGAGCCCTCATGCCTTGCTTCATTGTGTCAAATGTTCCATaGGATACAGTAGTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: LRLWDGAVHFGALMPCFIVSNVP*DTVVLD
Trigger: ATCCAACACTACTGTATCCAATGGAACATTTGACAC...AATGAAGCAAGGCATGAGGGCTCCAAAGTGAACTGCACCATCCCAGAGTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTTCTGGATTGTCCTTGTaGGAACTTCTGATTTGGAGA +
Preference number: 5 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPSGLSL*ELLIWR
Trigger: TCTCCAAATCAGAAGTTCCAACAAGGACAATCCAGA...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTAAATTGCTGTCTGGATaGTCCTTGTTGGAACTTCTG +
Preference number: 5 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPKLLSG*SLLELL
Trigger: CAGAAGTTCCAACAAGGACAATCCAGACAGCAATTT...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACATGGGGTTTTGCCACGTaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTWGFAT*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAACGTGGCAAAACCCCA...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS GCA 90 bp GAGATCGAAGTTAATGCTCATGTTTGTTTTCTCAAGACGTGGAACTaGAAATCGGAGGCCCAGGGAATAATTTGTTCCAGACACCATAGG +
Preference number: 5 (lower is better)
Translates to: EIEVNAHVCFLKTWN*KSEAQGIICSRHHR
Trigger: CCTATGGTGTCTGGAACAAATTATTCCCTGGGCCTCCGATTTGCAGTTCCACGTCTTGAGAAAACAAACATGAGCATTAACTTCGATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTGTTGGAACTTCTGATTaGGAGATCGAAGTTAATGCT +
Preference number: 5 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPVGTSD*EIEVNA
Trigger: AGCATTAACTTCGATCTCCAAATCAGAAGTTCCAAC...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp TCGCTCACATCACATCCTGTAGATGGCCACCTACTTGTAAAACCAGCTCTACCTATCAGTTTTCCCAGTTaGGCTCATGCCTGTATAATT +
Preference number: 5 (lower is better)
Translates to: SLTSHPVDGHLLVKPALPISFPS*AHACII
Trigger: AATTATACAGGCATGAGCCAAACTGGGAAAACTGAT...AGGTAGAGCTGGTTTTACAAGTAGGTGGCCATCTACAGGATGTGATGTGAGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAAGGATTGCTGGAAGGTTaGCCTGACCTCAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKEGLLEG*PDLSFL
Trigger: GAGGAAACTGAGGTCAGGCAAACCTTCCAGCAATCC...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS GCA 90 bp CAGTGGTCGAAATCCCTTGTTGTTGCGTTCGATTCCAACATAATCTaGCTCTTCTGGTATCATTACAAAGAGTTCAGCTTCATATGCTCC +
Preference number: 5 (lower is better)
Translates to: QWSKSLVVAFDSNII*LFWYHYKEFSFICS
Trigger: GGAGCATATGAAGCTGAACTCTTTGTAATGATACCAGAAGAGGCAGATTATGTTGGAATCGAACGCAACAACAAGGGATTTCGACCACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 90 bp GATTTGGAGATCGAAGTTAATGCTCATGTTTGTTTTCTCAAGACGTaGAACTGCAAATCGGAGGCCCAGGGAATAATTTGTTCCAGACAC +
Preference number: 5 (lower is better)
Translates to: DLEIEVNAHVCFLKT*NCKSEAQGIICSRH
Trigger: GTGTCTGGAACAAATTATTCCCTGGGCCTCCGATTTGCAGTTCCACGTCTTGAGAAAACAAACATGAGCATTAACTTCGATCTCCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 90 bp TGGGGAGGCAGCAGGCTTTATATCCTGTGGATTGATATTAGGATTTaGTTGGCACTGCAGAGGTCCCAGAGTTTGAATATGGAAAATATA +
Preference number: 5 (lower is better)
Translates to: WGGSRLYILWIDIRI*LALQRSQSLNMENI
Trigger: TATATTTTCCATATTCAAACTCTGGGACCTCTGCAGTGCCAACCAAATCCTAATATCAATCCACAGGATATAAAGCCTGCTGCCTCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTCAGGGGTCTTGTCATTaGTCAGCTGTTCCCTGTCGG +
Preference number: 5 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVQGSCH*SAVPCR
Trigger: CCGACAGGGAACAGCTGACAAATGACAAGACCCCTG...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS GCA 90 bp TTTGTTCCCATTATAAATGAGCACTTTGCCTCTTTGATCCTTGCCTaGAAAAGGCACTCCGATGGCAATGTCATTGTATCCATCTTGGTT +
Preference number: 5 (lower is better)
Translates to: FVPIINEHFASLILA*KRHSDGNVIVSILV
Trigger: AACCAAGATGGATACAATGACATTGCCATCGGAGTGCCTTTTGCAGGCAAGGATCAAAGAGGCAAAGTGCTCATTTATAATGGGAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 90 bp AAATCCCTTGTTGTTGCGTTCGATTCCAACATAATCTGCCTCTTCTaGTATCATTACAAAGAGTTCAGCTTCATATGCTCCTTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: KSLVVAFDSNIICLF*YHYKEFSFICSFPF
Trigger: GAAGGGGAAGGAGCATATGAAGCTGAACTCTTTGTAATGATACCAGAAGAGGCAGATTATGTTGGAATCGAACGCAACAACAAGGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp TCCCATACGCATTTCAAAGTGTCTGCCAAGTACAGAACGATTAAAGCAAAAGAAGGTCGAAATCCCTTGTaGTTGCGTTCGATTCCAACA +
Preference number: 5 (lower is better)
Translates to: SHTHFKVSAKYRTIKAKEGRNPL*LRSIPT
Trigger: TGTTGGAATCGAACGCAACAACAAGGGATTTCGACC...TTCTTTTGCTTTAATCGTTCTGTACTTGGCAGACACTTTGAAATGCGTATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTAGTGGTCGAAATCCCTaGTTGTTGCGTTCGATTCCA +
Preference number: 5 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGISGRNP*LLRSIP
Trigger: TGGAATCGAACGCAACAACAAGGGATTTCGACCACT...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACACTGATCTTTCTGTTGTaGGTGGTGTCAAACGGTATC +
Preference number: 5 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTLIFLL*VVSNGI
Trigger: GATACCGTTTGACACCACCAACAACAGAAAGATCAG...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACATTCCTTCTGGGAGTTTaGCTGGCTGATCTGTATAAG +
Preference number: 5 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTFLLGV*LADLYK
Trigger: CTTATACAGATCAGCCAGCAAAACTCCCAGAAGGAA...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTCCATGTGCCTTTCATTaGCTCCTCAATGAAGTTCCG +
Preference number: 5 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVPCAFH*LLNEVP
Trigger: CGGAACTTCATTGAGGAGCAAATGAAAGGCACATGG...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTAATTCTGTGCTCCTCTaGGAATTCCAGCAACCAATT +
Preference number: 5 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGINSVLL*EFQQPI
Trigger: AATTGGTTGCTGGAATTCCAAGAGGAGCACAGAATT...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTAGCAGTGATGTTGATTaGCAGGCTCACAAAATTGCT +
Preference number: 5 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGISSDVD*QAHKIA
Trigger: AGCAATTTTGTGAGCCTGCAAATCAACATCACTGCT...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp ATAAAATTTAGTGTCTGTGAGCTTGGCTCATCTTTCAAACAAAGCGTGATTGTTGAACAGGACCAGTGTTaGAGGTCTTTGGTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: IKFSVCELGSSFKQSVIVEQDQC*RSLVFF
Trigger: AAAGAAGACCAAAGACCTCAAACACTGGTCCTGTTC...AACAATCACGCTTTGTTTGAAAGATGAGCCAAGCTCACAGACACTAAATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS GCA 90 bp ATAATCTGCCTCTTCTGGTATCATTACAAAGAGTTCAGCTTCATATaGTCCTTCCCCTTCATTTCTTGCATTTATTATGAGCATAAGGTG +
Preference number: 5 (lower is better)
Translates to: IICLFWYHYKEFSFI*SFPFISCIYYEHKV
Trigger: CACCTTATGCTCATAATAAATGCAAGAAATGAAGGGGAAGGAGCATATGAAGCTGAACTCTTTGTAATGATACCAGAAGAGGCAGATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTTGTAGTAGTTCAATATaGGTTTCACTTCCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGICSSSI*VSLPGL
Trigger: AAGGCCTGGAAGTGAAACCAATATTGAACTACTACA...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp TTTTATGTAACCCTAAGAGTTCTCAGTTCCTTCACCAATGTTGGCTTAAAGACACAGAGGTCCCAGAGTTaGAATATGGAAAATATAGAG +
Preference number: 5 (lower is better)
Translates to: FYVTLRVLSSFTNVGLKTQRSQS*NMENIE
Trigger: CTCTATATTTTCCATATTCAAACTCTGGGACCTCTG...TGTCTTTAAGCCAACATTGGTGAAGGAACTGAGAACTCTTAGGGTTACATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS-3UTR CAA 90 bp AACATGTTTTCTCTGTGTATACAAGTACAAGGCATAGCAGGAAAAACGGGTATTTGTAAACTTAAGGATTaGGGTCAGCTTGTTCTATCA +
Preference number: 5 (lower is better)
Translates to: NMFSLCIQVQGIAGKTGICKLKD*GQLVLS
Trigger: TGATAGAACAAGCTGACCCAAATCCTTAAGTTTACA...AATACCCGTTTTTCCTGCTATGCCTTGTACTTGTATACACAGAGAAAACATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 72 bp GCGGCTGGCCCCGGGCGACATCTCCCTCCGCCCCGGTaGGTGGCTGCTACCCAGGAGCGCGAGCCGAGGACC +
Preference number: 6 (lower is better)
Translates to: AAGPGRHLPPPR*VAATQEREPRT
Trigger: GGTCCTCGGCTCGCGCTCCTGGGTAGCAGCCACCCACCGGGGCGGAGGGAGATGTCGCCCGGGGCCAGCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 72 bp AATAGACGGCTCCCCCTTCCACGATATCGGGCTGGCTaGTGTTGGCTTTGGGCGCCCCCACCAAGACACTCG +
Preference number: 6 (lower is better)
Translates to: NRRLPLPRYRAG*CWLWAPPPRHS
Trigger: CGAGTGTCTTGGTGGGGGCGCCCAAAGCCAACACCAGCCAGCCCGATATCGTGGAAGGGGGAGCCGTCTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS GCA 72 bp TCTTTCTGTTGTTGGTGGTGTCAAACGGTATCTGCCTaGACTGCGCAGACCCCTCCGCGGGCCAAGGACAGT +
Preference number: 6 (lower is better)
Translates to: SFCCWWCQTVSA*TAQTPPRAKDS
Trigger: ACTGTCCTTGGCCCGCGGAGGGGTCTGCGCAGTGCAGGCAGATACCGTTTGACACCACCAACAACAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS GCA 72 bp CTGATCTTTCTGTTGTTGGTGGTGTCAAACGGTATCTaGCTGCACTGCGCAGACCCCTCCGCGGGCCAAGGA +
Preference number: 6 (lower is better)
Translates to: LIFLLLVVSNGI*LHCADPSAGQG
Trigger: TCCTTGGCCCGCGGAGGGGTCTGCGCAGTGCAGGCAGATACCGTTTGACACCACCAACAACAGAAAGATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 72 bp CCGAATCTCCCAAACGTCTCGGTGCCAGTGAGGATCTaGGGGTCTCTGAAGAGGAGAGAGCTCACTTGCAAA +
Preference number: 6 (lower is better)
Translates to: PNLPNVSVPVRI*GSLKRRELTCK
Trigger: TTTGCAAGTGAGCTCTCTCCTCTTCAGAGACCCCCAGATCCTCACTGGCACCGAGACGTTTGGGAGATTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS TCA 72 bp TTCTCTGGAGGAAGGTGTGGGCCCATAATCGTGACCTaGCTTTCAGGACTGCGCTTTCTCCTCCTTCGAGTC +
Preference number: 6 (lower is better)
Translates to: FSGGRCGPIIVT*LSGLRFLLLRV
Trigger: GACTCGAAGGAGGAGAAAGCGCAGTCCTGAAAGTCAGGTCACGATTATGGGCCCACACCTTCCTCCAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 72 bp TGGTCCAACCTCCTCCTCTTTGTGGGGCTCCTCTTCTaGTTCCCAGTTATGAATGGGCAGAACAATCTGCGG +
Preference number: 6 (lower is better)
Translates to: WSNLLLFVGLLF*FPVMNGQNNLR
Trigger: CCGCAGATTGTTCTGCCCATTCATAACTGGGAACCAGAAGAGGAGCCCCACAAAGAGGAGGAGGTTGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 72 bp CCTCTGTCACCCAGGCCAGGTGATGTGAATTCACATTaGAGTTTGAGAAGCACCGGACTAACTCACCAGGCA +
Preference number: 6 (lower is better)
Translates to: PLSPRPGDVNSH*SLRSTGLTHQA
Trigger: TGCCTGGTGAGTTAGTCCGGTGCTTCTCAAACTCCAATGTGAATTCACATCACCTGGCCTGGGTGACAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468882.1
CDS TCA 72 bp TCATTTGTCAGCTGTTCCCTGTCGGTCATGTCCTCCTaGGGAGGTCTGGCTCTGTCAAAGAATCCACACTTC +
Preference number: 6 (lower is better)
Translates to: SFVSCSLSVMSS*GGLALSKNPHF
Trigger: GAAGTGTGGATTCTTTGACAGAGCCAGACCTCCTCAGGAGGACATGACCGACAGGGAACAGCTGACAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS GCA 72 bp AGGAGAGAACTCGGCATAGGCGCTGAAGTTCTGAATTaGTACATAGCAGGTGCCAACTGGGTCCTTTTCTGG +
Preference number: 6 (lower is better)
Translates to: RRELGIGAEVLN*YIAGANWVLFW
Trigger: CCAGAAAAGGACCCAGTTGGCACCTGCTATGTAGCAATTCAGAACTTCAGCGCCTATGCCGAGTTCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS GCA 72 bp ATCTGCGGAGGGTGTGACACTCCTCTTATTTCCACCTaGGCTACAGCAGTGATGTTGATTTGCAGGCTCACA +
Preference number: 6 (lower is better)
Translates to: ICGGCDTPLIST*ATAVMLICRLT
Trigger: TGTGAGCCTGCAAATCAACATCACTGCTGTAGCGCAGGTGGAAATAAGAGGAGTGTCACACCCTCCGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 72 bp GCTGTTCCCTGTCGGTCATGTCCTCCTGAGGAGGTCTaGCTCTGTCAAAGAATCCACACTTCCATAAAGCTA +
Preference number: 6 (lower is better)
Translates to: AVPCRSCPPEEV*LCQRIHTSIKL
Trigger: TAGCTTTATGGAAGTGTGGATTCTTTGACAGAGCCAGACCTCCTCAGGAGGACATGACCGACAGGGAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CAA 72 bp TCACCCAGGCCAGGTGATGTGAATTCACATTGGAGTTaGAGAAGCACCGGACTAACTCACCAGGCAGCAGAT +
Preference number: 6 (lower is better)
Translates to: SPRPGDVNSHWS*RSTGLTHQAAD
Trigger: ATCTGCTGCCTGGTGAGTTAGTCCGGTGCTTCTCAAACTCCAATGTGAATTCACATCACCTGGCCTGGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468882.1
CDS CAA 90 bp GGGTTCCCAAGGTCACACACCACCATCCTGGTTACATTTTCCATCTaGTACTCACAGCTCAGTGGTCGAAATCCCTTGTTGTTGCGTTCG +
Preference number: 6 (lower is better)
Translates to: GFPRSHTTILVTFSI*YSQLSGRNPLLLRS
Trigger: CGAACGCAACAACAAGGGATTTCGACCACTGAGCTGTGAGTACAAGATGGAAAATGTAACCAGGATGGTGGTGTGTGACCTTGGGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378076.4
ENST00000477064.1
CDS TCA 72 bp CAGAGAAAGGCCAGCCCACCTCCAGGATGGTGTCACTaGTGGTACTTGGTCCAATATTGTGCAGCTCATAAA +
Preference number: 6 (lower is better)
Translates to: QRKASPPPGWCH*WYLVQYCAAHK
Trigger: TTTATGAGCTGCACAATATTGGACCAAGTACCATCAGTGACACCATCCTGGAGGTGGGCTGGCCTTTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS GCA 72 bp GGGGTTGCTCTCAAATTCACGTTCCATAAAGAGAGGTaGCCCAACCAGGACATCATCCAGTCCATCACTGTT +
Preference number: 6 (lower is better)
Translates to: GVALKFTFHKER*PNQDIIQSITV
Trigger: AACAGTGATGGACTGGATGATGTCCTGGTTGGGGCACCTCTCTTTATGGAACGTGAATTTGAGAGCAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CAA 90 bp CACAATAAGGTCTCCATTCTTATAAAAATCCAGACTAAATCCTGCTaGGCAGTAACCCTGGCCTTCCGGATCAGCATTGCTGTTCCGGCA +
Preference number: 6 (lower is better)
Translates to: HNKVSILIKIQTKSC*AVTLAFRISIAVPA
Trigger: TGCCGGAACAGCAATGCTGATCCGGAAGGCCAGGGTTACTGCCAAGCAGGATTTAGTCTGGATTTTTATAAGAATGGAGACCTTATTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CAA 90 bp GGGGTCTCTGAAGAGGAGAGAGCTCACTTGCAAATACAGGTAGATTaGCCCTACTTCTCTGGGGTTGCTCTCAAATTCACGTTCCATAAA +
Preference number: 6 (lower is better)
Translates to: GVSEEERAHLQIQVD*PYFSGVALKFTFHK
Trigger: TTTATGGAACGTGAATTTGAGAGCAACCCCAGAGAAGTAGGGCAAATCTACCTGTATTTGCAAGTGAGCTCTCTCCTCTTCAGAGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CAA 90 bp TCCACCTGCGCTACAGCAGTGATGTTGATTTGCAGGCTCACAAAATaGCTGTCTGGATTGTCCTTGTTGGAACTTCTGATTTGGAGATCG +
Preference number: 6 (lower is better)
Translates to: STCATAVMLICRLTK*LSGLSLLELLIWRS
Trigger: CGATCTCCAAATCAGAAGTTCCAACAAGGACAATCCAGACAGCAATTTTGTGAGCCTGCAAATCAACATCACTGCTGTAGCGCAGGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 72 bp GCTGAAGTTCTGAATTGCTACATAGCAGGTGCCAACTaGGTCCTTTTCTGGTGTCGGTTTAAGAGTTCTCCA +
Preference number: 6 (lower is better)
Translates to: AEVLNCYIAGAN*VLFWCRFKSSP
Trigger: TGGAGAACTCTTAAACCGACACCAGAAAAGGACCCAGTTGGCACCTGCTATGTAGCAATTCAGAACTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 72 bp TCCAATATTGTGCAGCTCATAAATATGTTCCACCAATaGTCCAACCTCCTCCTCTTTGTGGGGCTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: SNIVQLINMFHQ*SNLLLFVGLLF
Trigger: GAAGAGGAGCCCCACAAAGAGGAGGAGGTTGGACCATTGGTGGAACATATTTATGAGCTGCACAATATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CAA 72 bp AGGTCACACACCACCATCCTGGTTACATTTTCCATCTaGTACTCACAGCTCAGTGGTCGAAATCCCTTGTTG +
Preference number: 6 (lower is better)
Translates to: RSHTTILVTFSI*YSQLSGRNPLL
Trigger: CAACAAGGGATTTCGACCACTGAGCTGTGAGTACAAGATGGAAAATGTAACCAGGATGGTGGTGTGTGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378076.4
ENST00000477064.1
CDS TCA 72 bp GGGTCCTTTTCTGGTGTCGGTTTAAGAGTTCTCCAGTaGTATAAAGGAGCACAGGCCACAACTTTTCCTTTG +
Preference number: 6 (lower is better)
Translates to: GSFSGVGLRVLQ*YKGAQATTFPL
Trigger: CAAAGGAAAAGTTGTGGCCTGTGCTCCTTTATATCACTGGAGAACTCTTAAACCGACACCAGAAAAGGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CAA 72 bp GTCTCCATTCTTATAAAAATCCAGACTAAATCCTGCTaGGCAGTAACCCTGGCCTTCCGGATCAGCATTGCT +
Preference number: 6 (lower is better)
Translates to: VSILIKIQTKSC*AVTLAFRISIA
Trigger: AGCAATGCTGATCCGGAAGGCCAGGGTTACTGCCAAGCAGGATTTAGTCTGGATTTTTATAAGAATGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CAA 72 bp ACTCCTCTTATTTCCACCTGCGCTACAGCAGTGATGTaGATTTGCAGGCTCACAAAATTGCTGTCTGGATTG +
Preference number: 6 (lower is better)
Translates to: TPLISTCATAVM*ICRLTKLLSGL
Trigger: CAATCCAGACAGCAATTTTGTGAGCCTGCAAATCAACATCACTGCTGTAGCGCAGGTGGAAATAAGAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CAA 90 bp GGAGGCAGCAGGCTTTATATCCTGTGGATTGATATTAGGATTTGGTaGGCACTGCAGAGGTCCCAGAGTTTGAATATGGAAAATATAGAG +
Preference number: 6 (lower is better)
Translates to: GGSRLYILWIDIRIW*ALQRSQSLNMENIE
Trigger: CTCTATATTTTCCATATTCAAACTCTGGGACCTCTGCAGTGCCAACCAAATCCTAATATCAATCCACAGGATATAAAGCCTGCTGCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS GCA 72 bp TGGCAAGTTTTATTTTCAAGATTGATAATCATTGGGTaGAGCAGAAGCTGGGCATCTACAGTCACAACCGGT +
Preference number: 6 (lower is better)
Translates to: WQVLFSRLIIIG*SRSWASTVTTG
Trigger: ACCGGTTGTGACTGTAGATGCCCAGCTTCTGCTGCACCCAATGATTATCAATCTTGAAAATAAAACTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378076.4
ENST00000468882.1
CDS GCA 72 bp GTTAATGCTCATGTTTGTTTTCTCAAGACGTGGAACTaGAAATCGGAGGCCCAGGGAATAATTTGTTCCAGA +
Preference number: 6 (lower is better)
Translates to: VNAHVCFLKTWN*KSEAQGIICSR
Trigger: TCTGGAACAAATTATTCCCTGGGCCTCCGATTTGCAGTTCCACGTCTTGAGAAAACAAACATGAGCATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 72 bp AGCAGGCTTTATATCCTGTGGATTGATATTAGGATTTaGTTGGCACTGCAGAGGTCCCAGAGTTTGAATATG +
Preference number: 6 (lower is better)
Translates to: SRLYILWIDIRI*LALQRSQSLNM
Trigger: CATATTCAAACTCTGGGACCTCTGCAGTGCCAACCAAATCCTAATATCAATCCACAGGATATAAAGCCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 72 bp TTTGTACAATTCAGTATTTTTGCAGGGCTCTGTCTGTaGAATTCGACCACATGTACATCCCTCTTCCTGACA +
Preference number: 6 (lower is better)
Translates to: FVQFSIFAGLCL*NSTTCTSLFLT
Trigger: TGTCAGGAAGAGGGATGTACATGTGGTCGAATTCCACAGACAGAGCCCTGCAAAAATACTGAATTGTACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CAA 72 bp GCTACAGCAGTGATGTTGATTTGCAGGCTCACAAAATaGCTGTCTGGATTGTCCTTGTTGGAACTTCTGATT +
Preference number: 6 (lower is better)
Translates to: ATAVMLICRLTK*LSGLSLLELLI
Trigger: AATCAGAAGTTCCAACAAGGACAATCCAGACAGCAATTTTGTGAGCCTGCAAATCAACATCACTGCTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS TCA 72 bp TATCTCGGAATTCAGTTTCATCTCGAAGGTAAACGATaGAATCCTGGCACTGGTGGGATTTCTGCCTTTTTA +
Preference number: 6 (lower is better)
Translates to: YLGIQFHLEGKR*NPGTGGISAFL
Trigger: TAAAAAGGCAGAAATCCCACCAGTGCCAGGATTTCATCGTTTACCTTCGAGATGAAACTGAATTCCGAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 72 bp GTTGTTGCGTTCGATTCCAACATAATCTGCCTCTTCTaGTATCATTACAAAGAGTTCAGCTTCATATGCTCC +
Preference number: 6 (lower is better)
Translates to: VVAFDSNIICLF*YHYKEFSFICS
Trigger: GGAGCATATGAAGCTGAACTCTTTGTAATGATACCAGAAGAGGCAGATTATGTTGGAATCGAACGCAACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 72 bp ATCGAAGTTAATGCTCATGTTTGTTTTCTCAAGACGTaGAACTGCAAATCGGAGGCCCAGGGAATAATTTGT +
Preference number: 6 (lower is better)
Translates to: IEVNAHVCFLKT*NCKSEAQGIIC
Trigger: ACAAATTATTCCCTGGGCCTCCGATTTGCAGTTCCACGTCTTGAGAAAACAAACATGAGCATTAACTTCGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 72 bp ACTCACCAGGCAGCAGATGTCATAGAGTCTGGAACCTaGCAAGTTTTATTTTCAAGATTGATAATCATTGGG +
Preference number: 6 (lower is better)
Translates to: THQAADVIESGT*QVLFSRLIIIG
Trigger: CCCAATGATTATCAATCTTGAAAATAAAACTTGCCAGGTTCCAGACTCTATGACATCTGCTGCCTGGTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468882.1
CDS TCA 72 bp AACCAGGACATCATCCAGTCCATCACTGTTAACATCTaGTACGACAACGGTATATCCAAAATAAGATGCCAT +
Preference number: 6 (lower is better)
Translates to: NQDIIQSITVNI*YDNGISKIRCH
Trigger: ATGGCATCTTATTTTGGATATACCGTTGTCGTATCAGATGTTAACAGTGATGGACTGGATGATGTCCTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS GCA 72 bp CGTAGAGTTAATGATGGAAACATATCCAAAATTCTGTaGTCCTCTTGGAATTCCAGCAACCAATTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: RRVNDGNISKIL*SSWNSSNQFLL
Trigger: CAGCAAGAATTGGTTGCTGGAATTCCAAGAGGAGCACAGAATTTTGGATATGTTTCCATCATTAACTCTACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS GCA 72 bp AAATCCCTTGTTGTTGCGTTCGATTCCAACATAATCTaGCTCTTCTGGTATCATTACAAAGAGTTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: KSLVVAFDSNII*LFWYHYKEFSF
Trigger: GAAGCTGAACTCTTTGTAATGATACCAGAAGAGGCAGATTATGTTGGAATCGAACGCAACAACAAGGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS GCA 72 bp CTCTTCTGGTATCATTACAAAGAGTTCAGCTTCATATaGTCCTTCCCCTTCATTTCTTGCATTTATTATGAG +
Preference number: 6 (lower is better)
Translates to: LFWYHYKEFSFI*SFPFISCIYYE
Trigger: CTCATAATAAATGCAAGAAATGAAGGGGAAGGAGCATATGAAGCTGAACTCTTTGTAATGATACCAGAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 72 bp TGTCTTAATTACTATGCTTCCTTCTGGGAGTTTTGCTaGCTGATCTGTATAAGGCATCTTCTTAACTTCAAA +
Preference number: 6 (lower is better)
Translates to: CLNYYASFWEFC*LICIRHLLNFK
Trigger: TTTGAAGTTAAGAAGATGCCTTATACAGATCAGCCAGCAAAACTCCCAGAAGGAAGCATAGTAATTAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CCA 72 bp CAAAGAATCCACACTTCCATAAAGCTAAGGTTAAAATaGCGAGAACCAACAATCCAAGAAGTATTGCTAGTA +
Preference number: 6 (lower is better)
Translates to: QRIHTSIKLRLK*REPTIQEVLLV
Trigger: TACTAGCAATACTTCTTGGATTGTTGGTTCTCGCCATTTTAACCTTAGCTTTATGGAAGTGTGGATTCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CAA 72 bp AGGTTAAAATGGCGAGAACCAACAATCCAAGAAGTATaGCTAGTATTATTACCCATAATGGGATTGAGAAGG +
Preference number: 6 (lower is better)
Translates to: RLKWREPTIQEV*LVLLPIMGLRR
Trigger: CCTTCTCAATCCCATTATGGGTAATAATACTAGCAATACTTCTTGGATTGTTGGTTCTCGCCATTTTAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4
CDS CAA 90 bp ATAAAGCTAAGGTTAAAATGGCGAGAACCAACAATCCAAGAAGTATaGCTAGTATTATTACCCATAATGGGATTGAGAAGGAAACATTCG +
Preference number: 6 (lower is better)
Translates to: IKLRLKWREPTIQEV*LVLLPIMGLRRKHS
Trigger: CGAATGTTTCCTTCTCAATCCCATTATGGGTAATAATACTAGCAATACTTCTTGGATTGTTGGTTCTCGCCATTTTAACCTTAGCTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378076.4