RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ISYNA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000105655

Ensembl transcript IDs: ENST00000338128.13, ENST00000457269.8, ENST00000577820.5, ENST00000577916.6, ENST00000578963.5, ENST00000582287.6, ENST00000582770.6, ENST00000582811.6, ENST00000583816.2

Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCACGGGTCCAACTCGCTTaGGGCTGGGCCCTGGGCGCT +
Preference number: 2 (lower is better)
Translates to: GGGHWGLLLQMPIGITGARVQLA*GWALGA
Trigger: AGCGCCCAGGGCCCAGCCTCAAGCGAGTTGGACCCG...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCAGGGACAGCACGGGGTaGAAGGTCTGCGGCTCGGGG +
Preference number: 2 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLARDSTG*KVCGSG
Trigger: CCCCGAGCCGCAGACCTTCCACCCCGTGCTGTCCCT...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582811.6
3UTR-3UTR TCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCGCCCCACGCAGGCCCTaGGGATGTTCTCGATGCAGC +
Preference number: 2 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLAAPRRP*GCSRCS
Trigger: GCTGCATCGAGAACATCCTCAGGGCCTGCGTGGGGC...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582811.6
3UTR-3UTR CCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCACTGCGCACGCGAGCCTaGGATGAGGTTGTCCGCGCG +
Preference number: 2 (lower is better)
Translates to: GGGHWGLLLQMPIGITGALRTRA*DEVVRA
Trigger: CGCGCGGACAACCTCATCCCAGGCTCGCGTGCGCAG...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577820.5
ENST00000582811.6
3UTR-3UTR CCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCACTGCGCACGCGAGCCTaGGATGAGGTTGTCCGCGCG +
Preference number: 2 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPLRTRA*DEVVRA
Trigger: CGCGCGGACAACCTCATCCCAGGCTCGCGTGCGCAG...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577820.5
ENST00000582811.6
3UTR-3UTR CCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAAGGGACAGCACGGGGTaGAAGGTCTGCGGCTCGGGG +
Preference number: 2 (lower is better)
Translates to: GGGHWGLLLQMPIGITGARDSTG*KVCGSG
Trigger: CCCCGAGCCGCAGACCTTCCACCCCGTGCTGTCCCT...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR TCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCAGCCCCACGCAGGCCCTaGGGATGTTCTCGATGCAGC +
Preference number: 2 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPAPRRP*GCSRCS
Trigger: GCTGCATCGAGAACATCCTCAGGGCCTGCGTGGGGC...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR GCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGCGGATCTGCTCCAGCTaGTGCGCACGCGAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWRICSS*CAREPG
Trigger: CCCAGGCTCGCGTGCGCAGCAGCTGGAGCAGATCCG...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577820.5
ENST00000582811.6
3UTR-3UTR CCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGAGCATGTGGTTCTGTaGCGGGAGCCCCACGCAGGC +
Preference number: 2 (lower is better)
Translates to: GGGHWGLLLQMPIGITGAEHVVL*REPHAG
Trigger: GCCTGCGTGGGGCTCCCGCCACAGAACCACATGCTC...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCAGAGCATGTGGTTCTGTaGCGGGAGCCCCACGCAGGC +
Preference number: 2 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPEHVVL*REPHAG
Trigger: GCCTGCGTGGGGCTCCCGCCACAGAACCACATGCTC...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR GCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAATCTGCTCCAGCTGCTaGGCACGCGAGCCTGGGATG +
Preference number: 2 (lower is better)
Translates to: GGGHWGLLLQMPIGITGAICSSC*AREPGM
Trigger: CATCCCAGGCTCGCGTGCGCAGCAGCTGGAGCAGAT...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577820.5
ENST00000582811.6
3UTR-3UTR GCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCAATCTGCTCCAGCTGCTaGGCACGCGAGCCTGGGATG +
Preference number: 2 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPICSSC*AREPGM
Trigger: CATCCCAGGCTCGCGTGCGCAGCAGCTGGAGCAGAT...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577820.5
ENST00000582811.6
3UTR-3UTR GCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCACGGGGTCCATGTCAGTaGAGAAGCTCACGCGCTGGC +
Preference number: 2 (lower is better)
Translates to: GGGHWGLLLQMPIGITGARGPCQ*RSSRAG
Trigger: GCCAGCGCGTGAGCTTCTGCACTGACATGGACCCCG...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR GCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAACGGGGTGGAAGGTCTaGGGCTCGGGGTCCATGTCA +
Preference number: 2 (lower is better)
Translates to: GGGHWGLLLQMPIGITGATGWKV*GSGSMS
Trigger: TGACATGGACCCCGAGCCGCAGACCTTCCACCCCGT...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCATTCAAGGTAGGGTCGTaGGGGGCAGCGGGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: GGGHWGLLLQMPIGITGAFKVGS*GAAGRK
Trigger: CTTCCTCCCCGCTGCCCCCCACGACCCTACCTTGAA...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCGCTCTCCCTGGGAGTTaGGGTGATGACCATGGGCAG +
Preference number: 2 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLAALPGS*GDDHGQ
Trigger: CTGCCCATGGTCATCACCCCAACTCCCAGGGAGAGC...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
3UTR-3UTR GCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCCCCTCTTTGGCCTTCTaGCACCACACTCTCCACCCT +
Preference number: 2 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLAPSLAF*HHTLHP
Trigger: AGGGTGGAGAGTGTGGTGGCAGAAGGCCAAAGAGGG...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
3UTR-3UTR GCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGATGTCCCTGCGGATCTaGTCCAGCTGCTGCGCACGC +
Preference number: 2 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWMSLRI*SSCCAR
Trigger: GCGTGCGCAGCAGCTGGAGCAGATCCGCAGGGACAT...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577820.5
ENST00000582811.6
3UTR-3UTR GCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCAGACCGAGCTCAATGGTaGGCAGCAGGTTCTCGGCTG +
Preference number: 2 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPDRAQW*AAGSRL
Trigger: CAGCCGAGAACCTGCTGCGCACCATTGAGCTCGGTC...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR GCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCCCCACAAAAACCCGGTaGTGCCACGCGAGCTCAAGA +
Preference number: 2 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLAPTKTR*CHASSR
Trigger: TCTTGAGCTCGCGTGGCAGCACCGGGTTTTTGTGGG...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000582811.6
3UTR-3UTR CCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGTTCAAGGTAGGGTCGTaGGGGGCAGCGGGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWFKVGS*GAAGRK
Trigger: CTTCCTCCCCGCTGCCCCCCACGACCCTACCTTGAA...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCTCTCCCTGGGAGTTaGGGTGATGACCATGGGCAG +
Preference number: 2 (lower is better)
Translates to: GGGHWGLLLQMPIGITGAALPGS*GDDHGQ
Trigger: CTGCCCATGGTCATCACCCCAACTCCCAGGGAGAGC...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582811.6
3UTR-3UTR CCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCAACACTCTCCACCCTGTaGTCTTGTTCCGTCCCCGCC +
Preference number: 2 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPTLSTL*SCSVPA
Trigger: GGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGT...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582811.6
3UTR-3UTR GCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCAGGCACCAGGGTGTTCTaGGGAGACCCATTGAGGAAG +
Preference number: 2 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPGTRVF*GDPLRK
Trigger: CTTCCTCAATGGGTCTCCGCAGAACACCCTGGTGCC...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR GCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCACCCACAAAAACCCGGTaGTGCCACGCGAGCTCAAGA +
Preference number: 2 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPPTKTR*CHASSR
Trigger: TCTTGAGCTCGCGTGGCAGCACCGGGTTTTTGTGGG...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR GCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAAGCACTGGGTTGCTCTaGACCATGTCGTCCACCACG +
Preference number: 2 (lower is better)
Translates to: GGGHWGLLLQMPIGITGASTGLL*TMSSTT
Trigger: CGTGGTGGACGACATGGTGCAGAGCAACCCAGTGCT...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCACTTGAGGCTGGGCCCTaGGCGCTCCATTTTGTGTTC +
Preference number: 2 (lower is better)
Translates to: GGGHWGLLLQMPIGITGALEAGP*ALHFVF
Trigger: GAACACAAAATGGAGCGCCCAGGGCCCAGCCTCAAG...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR TCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGTCTCGGCTGTGTCGTTaGGGCCTGGAATCACCTCAC +
Preference number: 2 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWSRLCR*GLESPH
Trigger: GTGAGGTGATTCCAGGCCTCAACGACACAGCCGAGA...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR GCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCAACAAAAACCCGGTGCTaGCACGCGAGCTCAAGAGCT +
Preference number: 2 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPTKTRC*HASSRA
Trigger: AGCTCTTGAGCTCGCGTGGCAGCACCGGGTTTTTGT...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR GCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGCCCACAAAAACCCGGTaGTGCCACGCGAGCTCAAGA +
Preference number: 2 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWPTKTR*CHASSR
Trigger: TCTTGAGCTCGCGTGGCAGCACCGGGTTTTTGTGGG...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCCTCAGATTCCCTCTTTaGCCTTCTGCCACCACACTC +
Preference number: 2 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLALRFPL*PSATTL
Trigger: GAGTGTGGTGGCAGAAGGCCAAAGAGGGAATCTGAG...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
3UTR-3UTR CCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGGGCGTATAGAGCACTaGGTTGCTCTGCACCATGTC +
Preference number: 2 (lower is better)
Translates to: GGGHWGLLLQMPIGITGAGRIEH*VALHHV
Trigger: GACATGGTGCAGAGCAACCCAGTGCTCTATACGCCC...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCAGGGCGTATAGAGCACTaGGTTGCTCTGCACCATGTC +
Preference number: 2 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPGRIEH*VALHHV
Trigger: GACATGGTGCAGAGCAACCCAGTGCTCTATACGCCC...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR GCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGGACCGAGCTCAATGGTaGGCAGCAGGTTCTCGGCTG +
Preference number: 2 (lower is better)
Translates to: LERNCNGADRFSPSLLPRDRAQW*AAGSRL
Trigger: CAGCCGAGAACCTGCTGCGCACCATTGAGCTCGGTC...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR GCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCTCCTCACACGTGTTGTaGAGCACCAGTGTGTTGGTT +
Preference number: 2 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLASSHVL*STSVLV
Trigger: AACCAACACACTGGTGCTGCACAACACGTGTGAGGA...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582811.6
3UTR-3UTR TCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTCTCGGCTGTGTCGTTaGGGCCTGGAATCACCTCAC +
Preference number: 2 (lower is better)
Translates to: LERNCNGADRFSPSLLPRSRLCR*GLESPH
Trigger: GTGAGGTGATTCCAGGCCTCAACGACACAGCCGAGA...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR GCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGGGCACCAGGGTGTTCTaGGGAGACCCATTGAGGAAG +
Preference number: 2 (lower is better)
Translates to: LERNCNGADRFSPSLLPRGTRVF*GDPLRK
Trigger: CTTCCTCAATGGGTCTCCGCAGAACACCCTGGTGCC...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR GCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCATCTCCCCATCGTTGTTaGCCAGGTGGTTGTAACTCA +
Preference number: 2 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPSPHRC*PGGCNS
Trigger: TGAGTTACAACCACCTGGGCAACAACGATGGGGAGA...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR GCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCATCCTCACACGTGTTGTaGAGCACCAGTGTGTTGGTT +
Preference number: 2 (lower is better)
Translates to: GGGHWGLLLQMPIGITGASSHVL*STSVLV
Trigger: AACCAACACACTGGTGCTGCACAACACGTGTGAGGA...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR GCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGACAAAAACCCGGTGCTaGCACGCGAGCTCAAGAGCT +
Preference number: 2 (lower is better)
Translates to: LERNCNGADRFSPSLLPRTKTRC*HASSRA
Trigger: AGCTCTTGAGCTCGCGTGGCAGCACCGGGTTTTTGT...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGCTCAGATTCCCTCTTTaGCCTTCTGCCACCACACTC +
Preference number: 2 (lower is better)
Translates to: LERNCNGADRFSPSLLPRLRFPL*PSATTL
Trigger: GAGTGTGGTGGCAGAAGGCCAAAGAGGGAATCTGAG...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582811.6
3UTR-3UTR CCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCAATGGAAGCTGGTTTTaGTTTTTGGTAGCTTGTCTC +
Preference number: 2 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLANGSWF*FLVACL
Trigger: GAGACAAGCTACCAAAAACCAAAACCAGCTTCCATT...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
3UTR-3UTR CCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAAATGGAAGCTGGTTTTaGTTTTTGGTAGCTTGTCTC +
Preference number: 2 (lower is better)
Translates to: GGGHWGLLLQMPIGITGANGSWF*FLVACL
Trigger: GAGACAAGCTACCAAAAACCAAAACCAGCTTCCATT...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000582811.6
3UTR-3UTR CAA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCAACGGGTCCAACTCGCTaGAGGCTGGGCCCTGGGCGC +
Preference number: 3 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPTGPTR*RLGPGR
Trigger: GCGCCCAGGGCCCAGCCTCAAGCGAGTTGGACCCGT...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CAA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCCTCCACCCTGTGGTCTaGTTCCGTCCCCGCCCCCAT +
Preference number: 3 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLALHPVV*FRPRPH
Trigger: ATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAG...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
3UTR-3UTR CAA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCACTCCACCCTGTGGTCTaGTTCCGTCCCCGCCCCCAT +
Preference number: 3 (lower is better)
Translates to: GGGHWGLLLQMPIGITGALHPVV*FRPRPH
Trigger: ATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAG...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000582811.6
3UTR-3UTR CAA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCACATCTAGCCCCACCTTaGAGAACTGGGGGCAGAGCG +
Preference number: 3 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPHLAPP*RTGGRA
Trigger: CGCTCTGCCCCCAGTTCTCAAAGGTGGGGCTAGATG...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000582811.6
3UTR-3UTR CAA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGGCACTAGTGGCGCCTaGAAGAGGAAGCTGAGCAGG +
Preference number: 3 (lower is better)
Translates to: GGGHWGLLLQMPIGITGAGTSGA*KRKLSR
Trigger: CCTGCTCAGCTTCCTCTTCAAGGCGCCACTAGTGCC...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CAA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCCCTGGGCGCTCCATTTaGTGTTCCAGGAGCATGTGG +
Preference number: 3 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLAPGRSI*CSRSMW
Trigger: CCACATGCTCCTGGAACACAAAATGGAGCGCCCAGG...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582811.6
3UTR-3UTR CAA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAACGATGGACATGGTCTaGAGGCCGGAGCCAATGAGG +
Preference number: 3 (lower is better)
Translates to: GGGHWGLLLQMPIGITGATMDMV*RPEPMR
Trigger: CCTCATTGGCTCCGGCCTCAAGACCATGTCCATCGT...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CAA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCAACGATGGACATGGTCTaGAGGCCGGAGCCAATGAGG +
Preference number: 3 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPTMDMV*RPEPMR
Trigger: CCTCATTGGCTCCGGCCTCAAGACCATGTCCATCGT...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CAA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCATCCACCACGTTGCTCTaGGACACCTCCTTAGAGCGG +
Preference number: 3 (lower is better)
Translates to: GGGHWGLLLQMPIGITGASTTLL*DTSLER
Trigger: CCGCTCTAAGGAGGTGTCCAAGAGCAACGTGGTGGA...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CAA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCATCCACCACGTTGCTCTaGGACACCTCCTTAGAGCGG +
Preference number: 3 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPSTTLL*DTSLER
Trigger: CCGCTCTAAGGAGGTGTCCAAGAGCAACGTGGTGGA...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CAA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCACCTGGGCGCTCCATTTaGTGTTCCAGGAGCATGTGG +
Preference number: 3 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPPGRSI*CSRSMW
Trigger: CCACATGCTCCTGGAACACAAAATGGAGCGCCCAGG...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR CCA 72 bp GCGCTCCATTTTGTGTTCCAGGAGCATGTGGTTCTGTaGCGGGAGCCCCACGCAGGCCCTGAGGATGTTCTC +
Preference number: 3 (lower is better)
Translates to: ALHFVFQEHVVL*REPHAGPEDVL
Trigger: GAGAACATCCTCAGGGCCTGCGTGGGGCTCCCGCCACAGAACCACATGCTCCTGGAACACAAAATGGAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CAA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGCACAGCACTATGACTTaGTCCAGCCCCGCGCTAGAC +
Preference number: 3 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWHSTMT*SSPALD
Trigger: GTCTAGCGCGGGGCTGGACAAAGTCATAGTGCTGTG...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577820.5
ENST00000582811.6
3UTR-3UTR CAA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCATTCTCGGCTGTGTCGTaGAGGCCTGGAATCACCTCA +
Preference number: 3 (lower is better)
Translates to: GGGHWGLLLQMPIGITGAFSAVS*RPGITS
Trigger: TGAGGTGATTCCAGGCCTCAACGACACAGCCGAGAA...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CAA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCAGAGTCCTCACACGTGTaGTGCAGCACCAGTGTGTTG +
Preference number: 3 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPESSHV*CSTSVL
Trigger: CAACACACTGGTGCTGCACAACACGTGTGAGGACTC...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CAA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGAGTCCTCACACGTGTaGTGCAGCACCAGTGTGTTG +
Preference number: 3 (lower is better)
Translates to: GGGHWGLLLQMPIGITGAESSHV*CSTSVL
Trigger: CAACACACTGGTGCTGCACAACACGTGTGAGGACTC...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CAA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGTTCTCGGCTGTGTCGTaGAGGCCTGGAATCACCTCA +
Preference number: 3 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWFSAVS*RPGITS
Trigger: TGAGGTGATTCCAGGCCTCAACGACACAGCCGAGAA...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CAA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGCACAGCACTATGACTTaGTCCAGCCCCGCGCTAGAC +
Preference number: 3 (lower is better)
Translates to: LERNCNGADRFSPSLLPRHSTMT*SSPALD
Trigger: GTCTAGCGCGGGGCTGGACAAAGTCATAGTGCTGTG...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577820.5
ENST00000582811.6
3UTR-3UTR CAA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGACGATGGACATGGTCTaGAGGCCGGAGCCAATGAGG +
Preference number: 3 (lower is better)
Translates to: LERNCNGADRFSPSLLPRTMDMV*RPEPMR
Trigger: CCTCATTGGCTCCGGCCTCAAGACCATGTCCATCGT...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CAA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTCTCAGATTCCCTCTTaGGCCTTCTGCCACCACACT +
Preference number: 3 (lower is better)
Translates to: LERNCNGADRFSPSLLPRSQIPS*AFCHHT
Trigger: AGTGTGGTGGCAGAAGGCCAAAGAGGGAATCTGAGA...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582811.6
3UTR-3UTR CAA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCTTGGTTTTTGGTAGCTaGTCTCAGATTCCCTCTTTG +
Preference number: 3 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLALVFGS*SQIPSL
Trigger: CAAAGAGGGAATCTGAGACAAGCTACCAAAAACCAA...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
3UTR-3UTR CAA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCAGCTGGTTTTGGTTTTaGGTAGCTTGTCTCAGATTC +
Preference number: 3 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLASWFWF*VACLRF
Trigger: GAATCTGAGACAAGCTACCAAAAACCAAAACCAGCT...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
3UTR GCA 72 bp ACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTaGCCAGGTGGTTGTAACTCACGATGGACATGGTCT +
Preference number: 3 (lower is better)
Translates to: TAMAPIGSPHRC*PGGCNSRWTWS
Trigger: AGACCATGTCCATCGTGAGTTACAACCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
3UTR-3UTR CAA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAAAATGGAAGCTGGTTTaGGTTTTTGGTAGCTTGTCT +
Preference number: 3 (lower is better)
Translates to: GGGHWGLLLQMPIGITGAKWKLV*VFGSLS
Trigger: AGACAAGCTACCAAAAACCAAAACCAGCTTCCATTT...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000582811.6
CDS-3UTR CCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCGGGGCCAAGCCAGCCTaGGTCCCCACGGAGGCCGTC +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLAGAKPA*VPTEAV
Trigger: GACGGCCTCCGTGGGGACCCAGGCTGGCTTGGCCCC...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000582811.6
CDS-3UTR TCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCACGCCACCCTCGCGGCTaGCGCGCGTCGTCCGGTACT +
Preference number: 4 (lower is better)
Translates to: GGGHWGLLLQMPIGITGARHPRG*RASSGT
Trigger: AGTACCGGACGACGCGCGTCAGCCGCGAGGGTGGCG...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR TCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCCGGGTCCAACTCGCTTaGGGCTGGGCCCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLARVQLA*GWALGA
Trigger: AGCGCCCAGGGCCCAGCCTCAAGCGAGTTGGACCCG...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR TCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGCGCCACCCTCGCGGCTaGCGCGCGTCGTCCGGTACT +
Preference number: 4 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWRHPRG*RASSGT
Trigger: AGTACCGGACGACGCGCGTCAGCCGCGAGGGTGGCG...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR TCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCACGTGGGGTGCACCTTaGGAACGCCACCCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLATWGAP*ERHPRG
Trigger: GCCGCGAGGGTGGCGTTCTCAAGGTGCACCCCACGT...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338128.13
CDS-3UTR TCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCACCCAGCCGACAAGCATaGCCCCGAGCCGGGGCACCT +
Preference number: 4 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPPSRQA*PRAGAP
Trigger: AGGTGCCCCGGCTCGGGGTCATGCTTGTCGGCTGGG...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582770.6
CDS-3UTR TCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCACGGGTCCAACTCGCTTaGGGCTGGGCCCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPRVQLA*GWALGA
Trigger: AGCGCCCAGGGCCCAGCCTCAAGCGAGTTGGACCCG...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCAGTAGTTGGCCTCCTTaGGGCCGCTGCGCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLASSWPP*GRCAWA
Trigger: GGCCCACGCGCAGCGGCCGCAAGGAGGCCAACTACT...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338128.13
CDS-3UTR CCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCTGCGGCCGCTGCGCGTaGGCCAGGACAAACGCAGTC +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLACGRCA*ARTNAV
Trigger: GACTGCGTTTGTCCTGGCCCACGCGCAGCGGCCGCA...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338128.13
CDS-3UTR CCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCCTGCGCACGCGAGCCTaGGATGAGGTTGTCCGCGCG +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLALRTRA*DEVVRA
Trigger: CGCGCGGACAACCTCATCCCAGGCTCGCGTGCGCAG...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR TCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCGCCACCCTCGCGGCTaGCGCGCGTCGTCCGGTACT +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVRHPRG*RASSGT
Trigger: AGTACCGGACGACGCGCGTCAGCCGCGAGGGTGGCG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR TCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCGAGATGTCCCAGCCTTaGGAACGCCACCCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLAEMSQP*ERHPRG
Trigger: GCCGCGAGGGTGGCGTTCTCAAGGCTGGGACATCTC...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582811.6
CDS-3UTR GCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCAAGTAGTTGGCCTCCTTaGGGCCGCTGCGCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPSSWPP*GRCAWA
Trigger: GGCCCACGCGCAGCGGCCGCAAGGAGGCCAACTACT...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582770.6
CDS-3UTR GCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGGGCCCAGGCTCACGGTaGCCGCCTGAGTCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWGPGSR*PPESAS
Trigger: GCTCGCTGACTCAGGCGGGCACCGTGAGCCTGGGCC...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582770.6
CDS-3UTR CCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCGCGAGCCGTAGTAGTTaGCCTCCTTGCGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLAASRSS*PPCGRC
Trigger: GCAGCGGCCGCAAGGAGGCCAACTACTACGGCTCGC...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338128.13
CDS-3UTR CCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCGAGCATGTGGTTCTGTaGCGGGAGCCCCACGCAGGC +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLAEHVVL*REPHAG
Trigger: GCCTGCGTGGGGCTCCCGCCACAGAACCACATGCTC...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR TCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGCGCCACCCTCGCGGCTaGCGCGCGTCGTCCGGTACT +
Preference number: 4 (lower is better)
Translates to: LERNCNGADRFSPSLLPRRHPRG*RASSGT
Trigger: AGTACCGGACGACGCGCGTCAGCCGCGAGGGTGGCG...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR TCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCCCAGCCGACAAGCATaGCCCCGAGCCGGGGCACCT +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVPSRQA*PRAGAP
Trigger: AGGTGCCCCGGCTCGGGGTCATGCTTGTCGGCTGGG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000338128.13
CDS-3UTR TCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCTGGGCAGCACCGCGCTaGAGGGTACGAACACCTCCT +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLAWAAPR*RVRTPP
Trigger: AGGAGGTGTTCGTACCCTTCAGCGCGGTGCTGCCCA...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338128.13
CDS-3UTR TCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCCCACGCAGGCCCTaGGGATGTTCTCGATGCAGC +
Preference number: 4 (lower is better)
Translates to: GGGHWGLLLQMPIGITGAAPRRP*GCSRCS
Trigger: GCTGCATCGAGAACATCCTCAGGGCCTGCGTGGGGC...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR TCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCGGGTCCAACTCGCTTaGGGCTGGGCCCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVRVQLA*GWALGA
Trigger: AGCGCCCAGGGCCCAGCCTCAAGCGAGTTGGACCCG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR TCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCAGAGATGTCCCAGCCTTaGGAACGCCACCCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPEMSQP*ERHPRG
Trigger: GCCGCGAGGGTGGCGTTCTCAAGGCTGGGACATCTC...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577820.5
ENST00000582811.6
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCGGCCCAGGCTCACGGTaGCCGCCTGAGTCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVGPGSR*PPESAS
Trigger: GCTCGCTGACTCAGGCGGGCACCGTGAGCCTGGGCC...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000457269.8
CDS-3UTR GCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCCATCCAGCGCGCGCTTaGTGTCACCCACGTACGGCA +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLAHPARA*CHPRTA
Trigger: TGCCGTACGTGGGTGACAGCAAGCGCGCGCTGGATG...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR GCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCCGGGGTCCATGTCAGTaGAGAAGCTCACGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLARGPCQ*RSSRAG
Trigger: GCCAGCGCGTGAGCTTCTGCACTGACATGGACCCCG...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR GCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCACGGGGTGGAAGGTCTaGGGCTCGGGGTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLATGWKV*GSGSMS
Trigger: TGACATGGACCCCGAGCCGCAGACCTTCCACCCCGT...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCACGGAGGCCGTCCCTaGCCCGAACCGCACTCACCG +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVHGGRP*PEPHSP
Trigger: CGGTGAGTGCGGTTCGGGGCAGGGACGGCCTCCGTG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582811.6
CDS-3UTR CCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCCGTATTGCGCCTCGATaGCCTCGGGGCCGTAGACCA +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLARIAPR*PRGRRP
Trigger: TGGTCTACGGCCCCGAGGCCATCGAGGCGCAATACG...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR CCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCAGCGAGCCGTAGTAGTTaGCCTCCTTGCGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPASRSS*PPCGRC
Trigger: GCAGCGGCCGCAAGGAGGCCAACTACTACGGCTCGC...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582770.6
CDS-3UTR CCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGCTGCGCACGCGAGCCTaGGATGAGGTTGTCCGCGCG +
Preference number: 4 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWLRTRA*DEVVRA
Trigger: CGCGCGGACAACCTCATCCCAGGCTCGCGTGCGCAG...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577820.5
ENST00000582811.6
CDS-3UTR CCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGAGGGACAGCACGGGGTaGAAGGTCTGCGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWRDSTG*KVCGSG
Trigger: CCCCGAGCCGCAGACCTTCCACCCCGTGCTGTCCCT...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR TCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGCGGGTCCAACTCGCTTaGGGCTGGGCCCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: LERNCNGADRFSPSLLPRRVQLA*GWALGA
Trigger: AGCGCCCAGGGCCCAGCCTCAAGCGAGTTGGACCCG...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCGGATCTGCTCCAGCTaGTGCGCACGCGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVRICSS*CAREPG
Trigger: CCCAGGCTCGCGTGCGCAGCAGCTGGAGCAGATCCG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCACATCCAGCGCGCGCTTaGTGTCACCCACGTACGGCA +
Preference number: 4 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPHPARA*CHPRTA
Trigger: TGCCGTACGTGGGTGACAGCAAGCGCGCGCTGGATG...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCACGGGGTCCATGTCAGTaGAGAAGCTCACGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPRGPCQ*RSSRAG
Trigger: GCCAGCGCGTGAGCTTCTGCACTGACATGGACCCCG...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCACGTATTGCGCCTCGATaGCCTCGGGGCCGTAGACCA +
Preference number: 4 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPRIAPR*PRGRRP
Trigger: TGGTCTACGGCCCCGAGGCCATCGAGGCGCAATACG...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCTGCGCACGCGAGCCTaGGATGAGGTTGTCCGCGCG +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVLRTRA*DEVVRA
Trigger: CGCGCGGACAACCTCATCCCAGGCTCGCGTGCGCAG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR CCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCAGGGACAGCACGGGGTaGAAGGTCTGCGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVRDSTG*KVCGSG
Trigger: CCCCGAGCCGCAGACCTTCCACCCCGTGCTGTCCCT...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR CCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCACACTCTCCACCCTGTaGTCTTGTTCCGTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLATLSTL*SCSVPA
Trigger: GGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGT...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR TCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGTGGGCAGCACCGCGCTaGAGGGTACGAACACCTCCT +
Preference number: 4 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWWAAPR*RVRTPP
Trigger: AGGAGGTGTTCGTACCCTTCAGCGCGGTGCTGCCCA...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582770.6
CDS-3UTR TCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCTCTCGGCTGTGTCGTTaGGGCCTGGAATCACCTCAC +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLASRLCR*GLESPH
Trigger: GTGAGGTGATTCCAGGCCTCAACGACACAGCCGAGA...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR TCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCGCCCCACGCAGGCCCTaGGGATGTTCTCGATGCAGC +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVAPRRP*GCSRCS
Trigger: GCTGCATCGAGAACATCCTCAGGGCCTGCGTGGGGC...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGCGGATCTGCTCCAGCTaGTGCGCACGCGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LERNCNGADRFSPSLLPRRICSS*CAREPG
Trigger: CCCAGGCTCGCGTGCGCAGCAGCTGGAGCAGATCCG...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577820.5
ENST00000582811.6
CDS-3UTR GCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCAGCACTGGGTTGCTCTaGACCATGTCGTCCACCACG +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLASTGLL*TMSSTT
Trigger: CGTGGTGGACGACATGGTGCAGAGCAACCCAGTGCT...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR GCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGCATCCAGCGCGCGCTTaGTGTCACCCACGTACGGCA +
Preference number: 4 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWHPARA*CHPRTA
Trigger: TGCCGTACGTGGGTGACAGCAAGCGCGCGCTGGATG...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGACGGGGTGGAAGGTCTaGGGCTCGGGGTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWTGWKV*GSGSMS
Trigger: TGACATGGACCCCGAGCCGCAGACCTTCCACCCCGT...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCGGCTCCTCTTGCAGATaGCCATTGGCATCACCGGTG +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLAGSSCR*PLASPV
Trigger: CACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCC...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR CCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCGAGCATGTGGTTCTGTaGCGGGAGCCCCACGCAGGC +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVEHVVL*REPHAG
Trigger: GCCTGCGTGGGGCTCCCGCCACAGAACCACATGCTC...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR CCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCCTTGAGGCTGGGCCCTaGGCGCTCCATTTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLALEAGP*ALHFVF
Trigger: GAACACAAAATGGAGCGCCCAGGGCCCAGCCTCAAG...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR TCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCTGGGCAGCACCGCGCTaGAGGGTACGAACACCTCCT +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVWAAPR*RVRTPP
Trigger: AGGAGGTGTTCGTACCCTTCAGCGCGGTGCTGCCCA...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000457269.8
CDS-3UTR TCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCATCTCGGCTGTGTCGTTaGGGCCTGGAATCACCTCAC +
Preference number: 4 (lower is better)
Translates to: GGGHWGLLLQMPIGITGASRLCR*GLESPH
Trigger: GTGAGGTGATTCCAGGCCTCAACGACACAGCCGAGA...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR TCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCAGTAGTTGGCCTCCTTaGGAACGCCACCCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVSSWPP*ERHPRG
Trigger: GCCGCGAGGGTGGCGTTCTCAAGGAGGCCAACTACT...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457269.8
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCATCTGCTCCAGCTGCTaGGCACGCGAGCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVICSSC*AREPGM
Trigger: CATCCCAGGCTCGCGTGCGCAGCAGCTGGAGCAGAT...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCATGTCCCTGCGGATCTaGTCCAGCTGCTGCGCACGC +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVMSLRI*SSCCAR
Trigger: GCGTGCGCAGCAGCTGGAGCAGATCCGCAGGGACAT...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGGCACCAGGGTGTTCTaGGGAGACCCATTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GGGHWGLLLQMPIGITGAGTRVF*GDPLRK
Trigger: CTTCCTCAATGGGTCTCCGCAGAACACCCTGGTGCC...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCATCCAGCGCGCGCTTaGTGTCACCCACGTACGGCA +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVHPARA*CHPRTA
Trigger: TGCCGTACGTGGGTGACAGCAAGCGCGCGCTGGATG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCGGGGTCCATGTCAGTaGAGAAGCTCACGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVRGPCQ*RSSRAG
Trigger: GCCAGCGCGTGAGCTTCTGCACTGACATGGACCCCG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCACGGGGTGGAAGGTCTaGGGCTCGGGGTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVTGWKV*GSGSMS
Trigger: TGACATGGACCCCGAGCCGCAGACCTTCCACCCCGT...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCAGGCTCCTCTTGCAGATaGCCATTGGCATCACCGGTG +
Preference number: 4 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPGSSCR*PLASPV
Trigger: CACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCC...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCGTATTGCGCCTCGATaGCCTCGGGGCCGTAGACCA +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVRIAPR*PRGRRP
Trigger: TGGTCTACGGCCCCGAGGCCATCGAGGCGCAATACG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR CCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGGAGCATGTGGTTCTGTaGCGGGAGCCCCACGCAGGC +
Preference number: 4 (lower is better)
Translates to: LERNCNGADRFSPSLLPREHVVL*REPHAG
Trigger: GCCTGCGTGGGGCTCCCGCCACAGAACCACATGCTC...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCTTCAAGGTAGGGTCGTaGGGGGCAGCGGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVFKVGS*GAAGRK
Trigger: CTTCCTCCCCGCTGCCCCCCACGACCCTACCTTGAA...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCGACCGAGCTCAATGGTaGGCAGCAGGTTCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVDRAQW*AAGSRL
Trigger: CAGCCGAGAACCTGCTGCGCACCATTGAGCTCGGTC...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGGGCACCAGGGTGTTCTaGGGAGACCCATTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWGTRVF*GDPLRK
Trigger: CTTCCTCAATGGGTCTCCGCAGAACACCCTGGTGCC...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAACAAAAACCCGGTGCTaGCACGCGAGCTCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: GGGHWGLLLQMPIGITGATKTRC*HASSRA
Trigger: AGCTCTTGAGCTCGCGTGGCAGCACCGGGTTTTTGT...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCTCCTTAGAGCGGAACTaGAATGGCGCCGATAGGTTC +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLASLERN*NGADRF
Trigger: GAACCTATCGGCGCCATTGCAGTTCCGCTCTAAGGA...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR GCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGACGGGGTGGAAGGTCTaGGGCTCGGGGTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: LERNCNGADRFSPSLLPRTGWKV*GSGSMS
Trigger: TGACATGGACCCCGAGCCGCAGACCTTCCACCCCGT...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGGGCTCCTCTTGCAGATaGCCATTGGCATCACCGGTG +
Preference number: 4 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWGSSCR*PLASPV
Trigger: CACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCC...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCATTGGGGGCTCCTCTTaGAGATGCCCATTGGCATCA +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLAIGGSS*RCPLAS
Trigger: TGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAAT...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR GCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGAGTCTCGGATGTCCCTaGGGATCTGCTCCAGCATCG +
Preference number: 4 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWSLGCP*GSAPAS
Trigger: CGATGCTGGAGCAGATCCGCAGGGACATCCGAGACT...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582770.6
CDS-3UTR CCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGCGTATTGCGCCTCGATaGCCTCGGGGCCGTAGACCA +
Preference number: 4 (lower is better)
Translates to: LERNCNGADRFSPSLLPRRIAPR*PRGRRP
Trigger: TGGTCTACGGCCCCGAGGCCATCGAGGCGCAATACG...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGCTTGAGGCTGGGCCCTaGGCGCTCCATTTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWLEAGP*ALHFVF
Trigger: GAACACAAAATGGAGCGCCCAGGGCCCAGCCTCAAG...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCACTTGCAGATGCCCATTaGCATCACCGGTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPLADAH*HHRCSH
Trigger: ATGGCTGCACCGGTGATGCCAATGGGCATCTGCAAG...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTTCAAGGTAGGGTCGTaGGGGGCAGCGGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LERNCNGADRFSPSLLPRFKVGS*GAAGRK
Trigger: CTTCCTCCCCGCTGCCCCCCACGACCCTACCTTGAA...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000582770.6
ENST00000582811.6
CDS-3UTR TCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCTCTCGGCTGTGTCGTTaGGGCCTGGAATCACCTCAC +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVSRLCR*GLESPH
Trigger: GTGAGGTGATTCCAGGCCTCAACGACACAGCCGAGA...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCGGCACCAGGGTGTTCTaGGGAGACCCATTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVGTRVF*GDPLRK
Trigger: CTTCCTCAATGGGTCTCCGCAGAACACCCTGGTGCC...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCCCACAAAAACCCGGTaGTGCCACGCGAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVPTKTR*CHASSR
Trigger: TCTTGAGCTCGCGTGGCAGCACCGGGTTTTTGTGGG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCTCTCCCCATCGTTGTTaGCCAGGTGGTTGTAACTCA +
Preference number: 4 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLASPHRC*PGGCNS
Trigger: TGAGTTACAACCACCTGGGCAACAACGATGGGGAGA...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR GCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCATCCTTAGAGCGGAACTaGAATGGCGCCGATAGGTTC +
Preference number: 4 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPSLERN*NGADRF
Trigger: GAACCTATCGGCGCCATTGCAGTTCCGCTCTAAGGA...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCAGCACTGGGTTGCTCTaGACCATGTCGTCCACCACG +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVSTGLL*TMSSTT
Trigger: CGTGGTGGACGACATGGTGCAGAGCAACCCAGTGCT...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCGGCTCCTCTTGCAGATaGCCATTGGCATCACCGGTG +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVGSSCR*PLASPV
Trigger: CACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCC...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAATTGGGGGCTCCTCTTaGAGATGCCCATTGGCATCA +
Preference number: 4 (lower is better)
Translates to: GGGHWGLLLQMPIGITGAIGGSS*RCPLAS
Trigger: TGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAAT...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCCCTCTTTGGCCTTCTaGCACCACACTCTCCACCCT +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVPSLAF*HHTLHP
Trigger: AGGGTGGAGAGTGTGGTGGCAGAAGGCCAAAGAGGG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR GCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGATGTCCCTGCGGATCTaGTCCAGCATCGAACACGAG +
Preference number: 4 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWMSLRI*SSIEHE
Trigger: CTCGTGTTCGATGCTGGAGCAGATCCGCAGGGACAT...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582770.6
CDS-3UTR CCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCTTGAGGCTGGGCCCTaGGCGCTCCATTTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVLEAGP*ALHFVF
Trigger: GAACACAAAATGGAGCGCCCAGGGCCCAGCCTCAAG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR CCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGCTTGCAGATGCCCATTaGCATCACCGGTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWLADAH*HHRCSH
Trigger: ATGGCTGCACCGGTGATGCCAATGGGCATCTGCAAG...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCACAAAAACCCGGTGCTaGCACGCGAGCTCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVTKTRC*HASSRA
Trigger: AGCTCTTGAGCTCGCGTGGCAGCACCGGGTTTTTGT...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGCCCACAAAAACCCGGTaGTGCCACGCGAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LERNCNGADRFSPSLLPRPTKTR*CHASSR
Trigger: TCTTGAGCTCGCGTGGCAGCACCGGGTTTTTGTGGG...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCATCTCCCCATCGTTGTTaGCCAGGTGGTTGTAACTCA +
Preference number: 4 (lower is better)
Translates to: GGGHWGLLLQMPIGITGASPHRC*PGGCNS
Trigger: TGAGTTACAACCACCTGGGCAACAACGATGGGGAGA...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGTCCTTAGAGCGGAACTaGAATGGCGCCGATAGGTTC +
Preference number: 4 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWSLERN*NGADRF
Trigger: GAACCTATCGGCGCCATTGCAGTTCCGCTCTAAGGA...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGAGCACTGGGTTGCTCTaGACCATGTCGTCCACCACG +
Preference number: 4 (lower is better)
Translates to: LERNCNGADRFSPSLLPRSTGLL*TMSSTT
Trigger: CGTGGTGGACGACATGGTGCAGAGCAACCCAGTGCT...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCATCCTCACACGTGTTGTaGAGCACCAGTGTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPSSHVL*STSVLV
Trigger: AACCAACACACTGGTGCTGCACAACACGTGTGAGGA...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGATTGGGGGCTCCTCTTaGAGATGCCCATTGGCATCA +
Preference number: 4 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWIGGSS*RCPLAS
Trigger: TGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAAT...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCGGGCGTATAGAGCACTaGGTTGCTCTGCACCATGTC +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVGRIEH*VALHHV
Trigger: GACATGGTGCAGAGCAACCCAGTGCTCTATACGCCC...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR CCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGCTTGAGGCTGGGCCCTaGGCGCTCCATTTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: LERNCNGADRFSPSLLPRLEAGP*ALHFVF
Trigger: GAACACAAAATGGAGCGCCCAGGGCCCAGCCTCAAG...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCTTGCAGATGCCCATTaGCATCACCGGTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVLADAH*HHRCSH
Trigger: ATGGCTGCACCGGTGATGCCAATGGGCATCTGCAAG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGTCTCCCCATCGTTGTTaGCCAGGTGGTTGTAACTCA +
Preference number: 4 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWSPHRC*PGGCNS
Trigger: TGAGTTACAACCACCTGGGCAACAACGATGGGGAGA...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCTCCTTAGAGCGGAACTaGAATGGCGCCGATAGGTTC +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVSLERN*NGADRF
Trigger: GAACCTATCGGCGCCATTGCAGTTCCGCTCTAAGGA...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCATTGGGGGCTCCTCTTaGAGATGCCCATTGGCATCA +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVIGGSS*RCPLAS
Trigger: TGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAAT...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR CCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGGGGCGTATAGAGCACTaGGTTGCTCTGCACCATGTC +
Preference number: 4 (lower is better)
Translates to: LERNCNGADRFSPSLLPRGRIEH*VALHHV
Trigger: GACATGGTGCAGAGCAACCCAGTGCTCTATACGCCC...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCTCAGATTCCCTCTTTaGCCTTCTGCCACCACACTC +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVLRFPL*PSATTL
Trigger: GAGTGTGGTGGCAGAAGGCCAAAGAGGGAATCTGAG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCTCTCCCCATCGTTGTTaGCCAGGTGGTTGTAACTCA +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVSPHRC*PGGCNS
Trigger: TGAGTTACAACCACCTGGGCAACAACGATGGGGAGA...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTCCTTAGAGCGGAACTaGAATGGCGCCGATAGGTTC +
Preference number: 4 (lower is better)
Translates to: LERNCNGADRFSPSLLPRSLERN*NGADRF
Trigger: GAACCTATCGGCGCCATTGCAGTTCCGCTCTAAGGA...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCTCCTCACACGTGTTGTaGAGCACCAGTGTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVSSHVL*STSVLV
Trigger: AACCAACACACTGGTGCTGCACAACACGTGTGAGGA...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR GCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGATTGGGGGCTCCTCTTaGAGATGCCCATTGGCATCA +
Preference number: 4 (lower is better)
Translates to: LERNCNGADRFSPSLLPRIGGSS*RCPLAS
Trigger: TGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAAT...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTCTCCCCATCGTTGTTaGCCAGGTGGTTGTAACTCA +
Preference number: 4 (lower is better)
Translates to: LERNCNGADRFSPSLLPRSPHRC*PGGCNS
Trigger: TGAGTTACAACCACCTGGGCAACAACGATGGGGAGA...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR GCA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTCCTCACACGTGTTGTaGAGCACCAGTGTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: LERNCNGADRFSPSLLPRSSHVL*STSVLV
Trigger: AACCAACACACTGGTGCTGCACAACACGTGTGAGGA...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CCA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCAATGGAAGCTGGTTTTaGTTTTTGGTAGCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVNGSWF*FLVACL
Trigger: GAGACAAGCTACCAAAAACCAAAACCAGCTTCCATT...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS TCA 90 bp CCTCCTGGGGGTCAGCAGACACGGCGAGGTGACGGGTGGGAGTGGTaGAAGGGCCGCGACCCGGCCTGGGCCCCACCTAGACTCTCAAGC +
Preference number: 5 (lower is better)
Translates to: PPGGQQTRRGDGWEW*KGRDPAWAPPRLSS
Trigger: GCTTGAGAGTCTAGGTGGGGCCCAGGCCGGGTCGCGGCCCTTTCACCACTCCCACCCGTCACCTCGCCGTGTCTGCTGACCCCCAGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578963.5
CDS-3UTR CAA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAACGGGTCCAACTCGCTaGAGGCTGGGCCCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: GGGHWGLLLQMPIGITGATGPTR*RLGPGR
Trigger: GCGCCCAGGGCCCAGCCTCAAGCGAGTTGGACCCGT...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CAA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGACGTGGGGTGCACCTaGAGAACGCCACCCTCGCGG +
Preference number: 5 (lower is better)
Translates to: GGGHWGLLLQMPIGITGADVGCT*RTPPSR
Trigger: CCGCGAGGGTGGCGTTCTCAAGGTGCACCCCACGTC...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582770.6
CDS-3UTR CAA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCACGGGTCCAACTCGCTaGAGGCTGGGCCCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVTGPTR*RLGPGR
Trigger: GCGCCCAGGGCCCAGCCTCAAGCGAGTTGGACCCGT...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR CAA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCACGAGATGTCCCAGCCTaGAGAACGCCACCCTCGCGG +
Preference number: 5 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPRDVPA*RTPPSR
Trigger: CCGCGAGGGTGGCGTTCTCAAGGCTGGGACATCTCG...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577820.5
ENST00000582811.6
CDS-3UTR CAA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCGACGTGGGGTGCACCTaGAGAACGCCACCCTCGCGG +
Preference number: 5 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVDVGCT*RTPPSR
Trigger: CCGCGAGGGTGGCGTTCTCAAGGTGCACCCCACGTC...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338128.13
CDS-3UTR CAA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGGTGAGTGTGGAGCCGTaGTTCCCGCCCCAGCCGACA +
Preference number: 5 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWVSVEP*FPPQPT
Trigger: TGTCGGCTGGGGCGGGAACAACGGCTCCACACTCAC...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582770.6
CDS-3UTR CAA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCGGCACTAGTGGCGCCTaGAAGAGGAAGCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLAGTSGA*KRKLSR
Trigger: CCTGCTCAGCTTCCTCTTCAAGGCGCCACTAGTGCC...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR CAA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGACGGGTCCAACTCGCTaGAGGCTGGGCCCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: LERNCNGADRFSPSLLPRTGPTR*RLGPGR
Trigger: GCGCCCAGGGCCCAGCCTCAAGCGAGTTGGACCCGT...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CAA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCCATCTAGCCCCACCTTaGAGAACTGGGGGCAGAGCG +
Preference number: 5 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLAHLAPP*RTGGRA
Trigger: CGCTCTGCCCCCAGTTCTCAAAGGTGGGGCTAGATG...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR CAA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCGTGAGTGTGGAGCCGTaGTTCCCGCCCCAGCCGACA +
Preference number: 5 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVVSVEP*FPPQPT
Trigger: TGTCGGCTGGGGCGGGAACAACGGCTCCACACTCAC...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338128.13
CDS-3UTR CAA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCACGATGGACATGGTCTaGAGGCCGGAGCCAATGAGG +
Preference number: 5 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLATMDMV*RPEPMR
Trigger: CCTCATTGGCTCCGGCCTCAAGACCATGTCCATCGT...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR CAA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCTCCACCACGTTGCTCTaGGACACCTCCTTAGAGCGG +
Preference number: 5 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLASTTLL*DTSLER
Trigger: CCGCTCTAAGGAGGTGTCCAAGAGCAACGTGGTGGA...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR CAA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCACTCAGGTGGTGGGCATaGGGGGCTCCTCTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPLRWWA*GAPLAD
Trigger: ATCTGCAAGAGGAGCCCCCAATGCCCACCACCTGAG...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CAA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCGAGATGTCCCAGCCTaGAGAACGCCACCCTCGCGG +
Preference number: 5 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVRDVPA*RTPPSR
Trigger: CCGCGAGGGTGGCGTTCTCAAGGCTGGGACATCTCG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582811.6
CDS-3UTR CAA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCTTCTCGGCTGTGTCGTaGAGGCCTGGAATCACCTCA +
Preference number: 5 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLAFSAVS*RPGITS
Trigger: TGAGGTGATTCCAGGCCTCAACGACACAGCCGAGAA...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR CAA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGGGCACTAGTGGCGCCTaGAAGAGGAAGCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWGTSGA*KRKLSR
Trigger: CCTGCTCAGCTTCCTCTTCAAGGCGCCACTAGTGCC...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CAA 90 bp GTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAGCCATCTTGCAGATGCCCATaGGCATCACCGGTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: VGIGGSSCRCPLASPVQPSCRCP*ASPVQP
Trigger: TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGA...TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CAA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCACATTGGGGGCTCCTCTaGCAGATGCCCATTGGCATC +
Preference number: 5 (lower is better)
Translates to: GGGHWGLLLQMPIGITGAHWGLL*QMPIGI
Trigger: GATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATG...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CAA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGCTCAGGTGGTGGGCATaGGGGGCTCCTCTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWLRWWA*GAPLAD
Trigger: ATCTGCAAGAGGAGCCCCCAATGCCCACCACCTGAG...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CAA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGACGATGGACATGGTCTaGAGGCCGGAGCCAATGAGG +
Preference number: 5 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWTMDMV*RPEPMR
Trigger: CCTCATTGGCTCCGGCCTCAAGACCATGTCCATCGT...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CAA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGTCCACCACGTTGCTCTaGGACACCTCCTTAGAGCGG +
Preference number: 5 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWSTTLL*DTSLER
Trigger: CCGCTCTAAGGAGGTGTCCAAGAGCAACGTGGTGGA...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CAA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCGGCACTAGTGGCGCCTaGAAGAGGAAGCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVGTSGA*KRKLSR
Trigger: CCTGCTCAGCTTCCTCTTCAAGGCGCCACTAGTGCC...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR CAA 90 bp GAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTGGCCTGGGCGCTCCATTTaGTGTTCCAGGAGCATGTGG +
Preference number: 5 (lower is better)
Translates to: ERNCNGADRFSPSLLPRWPGRSI*CSRSMW
Trigger: CCACATGCTCCTGGAACACAAAATGGAGCGCCCAGG...CCACCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CAA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCTCAGGTGGTGGGCATaGGGGGCTCCTCTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVLRWWA*GAPLAD
Trigger: ATCTGCAAGAGGAGCCCCCAATGCCCACCACCTGAG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR CAA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCATCTAGCCCCACCTTaGAGAACTGGGGGCAGAGCG +
Preference number: 5 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVHLAPP*RTGGRA
Trigger: CGCTCTGCCCCCAGTTCTCAAAGGTGGGGCTAGATG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR CAA 90 bp TGCCACCACACTCTCCACCCTGTGGTCTTGTTCCGTCCCCGCCCCCATCTAGCCTCTCAGATTCCCTCTTaGGCCTTCTGCCACCACACT +
Preference number: 5 (lower is better)
Translates to: CHHTLHPVVLFRPRPHLASQIPS*AFCHHT
Trigger: AGTGTGGTGGCAGAAGGCCAAAGAGGGAATCTGAGA...GGCTAGATGGGGGCGGGGACGGAACAAGACCACAGGGTGGAGAGTGTGGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR CAA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCACAGCACTATGACTTaGTCCAGCCCCGCGCTAGAC +
Preference number: 5 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVHSTMT*SSPALD
Trigger: GTCTAGCGCGGGGCTGGACAAAGTCATAGTGCTGTG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR CAA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCACGATGGACATGGTCTaGAGGCCGGAGCCAATGAGG +
Preference number: 5 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVTMDMV*RPEPMR
Trigger: CCTCATTGGCTCCGGCCTCAAGACCATGTCCATCGT...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR CAA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCTCCACCACGTTGCTCTaGGACACCTCCTTAGAGCGG +
Preference number: 5 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVSTTLL*DTSLER
Trigger: CCGCTCTAAGGAGGTGTCCAAGAGCAACGTGGTGGA...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR CAA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCCTGGGCGCTCCATTTaGTGTTCCAGGAGCATGTGG +
Preference number: 5 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVPGRSI*CSRSMW
Trigger: CCACATGCTCCTGGAACACAAAATGGAGCGCCCAGG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR CAA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCTCTTGCAGATGCCCATaGGCATCACCGGTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVSCRCP*ASPVQP
Trigger: TGGCTGCACCGGTGATGCCAATGGGCATCTGCAAGA...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR CAA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCCATTGGGGGCTCCTCTaGCAGATGCCCATTGGCATC +
Preference number: 5 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVHWGLL*QMPIGI
Trigger: GATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATG...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR CAA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGCTCAGGTGGTGGGCATaGGGGGCTCCTCTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: LERNCNGADRFSPSLLPRLRWWA*GAPLAD
Trigger: ATCTGCAAGAGGAGCCCCCAATGCCCACCACCTGAG...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CAA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCTTCTCGGCTGTGTCGTaGAGGCCTGGAATCACCTCA +
Preference number: 5 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVFSAVS*RPGITS
Trigger: TGAGGTGATTCCAGGCCTCAACGACACAGCCGAGAA...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR CAA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCGAGTCCTCACACGTGTaGTGCAGCACCAGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVESSHV*CSTSVL
Trigger: CAACACACTGGTGCTGCACAACACGTGTGAGGACTC...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338128.13
ENST00000457269.8
ENST00000582811.6
CDS-3UTR CAA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGCCTGGGCGCTCCATTTaGTGTTCCAGGAGCATGTGG +
Preference number: 5 (lower is better)
Translates to: LERNCNGADRFSPSLLPRPGRSI*CSRSMW
Trigger: CCACATGCTCCTGGAACACAAAATGGAGCGCCCAGG...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CAA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGCATTGGGGGCTCCTCTaGCAGATGCCCATTGGCATC +
Preference number: 5 (lower is better)
Translates to: LERNCNGADRFSPSLLPRHWGLL*QMPIGI
Trigger: GATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATG...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CAA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGTTCTCGGCTGTGTCGTaGAGGCCTGGAATCACCTCA +
Preference number: 5 (lower is better)
Translates to: LERNCNGADRFSPSLLPRFSAVS*RPGITS
Trigger: TGAGGTGATTCCAGGCCTCAACGACACAGCCGAGAA...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CAA 90 bp TTAGAGCGGAACTGCAATGGCGCCGATAGGTTCTCCCCATCGTTGTTGCCCAGGGAGTCCTCACACGTGTaGTGCAGCACCAGTGTGTTG +
Preference number: 5 (lower is better)
Translates to: LERNCNGADRFSPSLLPRESSHV*CSTSVL
Trigger: CAACACACTGGTGCTGCACAACACGTGTGAGGACTC...CCTGGGCAACAACGATGGGGAGAACCTATCGGCGCCATTGCAGTTCCGCTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577820.5
ENST00000582770.6
ENST00000582811.6
CDS-3UTR CAA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCTCTCAGATTCCCTCTTaGGCCTTCTGCCACCACACT +
Preference number: 5 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVSQIPS*AFCHHT
Trigger: AGTGTGGTGGCAGAAGGCCAAAGAGGGAATCTGAGA...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS-3UTR CAA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCATTGGTTTTTGGTAGCTaGTCTCAGATTCCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: GGGHWGLLLQMPIGITGALVFGS*SQIPSL
Trigger: CAAAGAGGGAATCTGAGACAAGCTACCAAAAACCAA...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000582811.6
CDS-3UTR CAA 90 bp GGTGGTGGGCATTGGGGGCTCCTCTTGCAGATGCCCATTGGCATCACCGGTGCAAGCTGGTTTTGGTTTTaGGTAGCTTGTCTCAGATTC +
Preference number: 5 (lower is better)
Translates to: GGGHWGLLLQMPIGITGASWFWF*VACLRF
Trigger: GAATCTGAGACAAGCTACCAAAAACCAAAACCAGCT...TGCACCGGTGATGCCAATGGGCATCTGCAAGAGGAGCCCCCAATGCCCACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000582811.6
CDS-3UTR CAA 90 bp GAAGGAGGGCTGAGTGGCAGCGCCTTTATTTGTGGGGGCCTTCAAGGTAGGGTCAAATGGAAGCTGGTTTaGGTTTTTGGTAGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: EGGLSGSAFICGGLQGRVKWKLV*VFGSLS
Trigger: AGACAAGCTACCAAAAACCAAAACCAGCTTCCATTT...GACCCTACCTTGAAGGCCCCCACAAATAAAGGCGCTGCCACTCAGCCCTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338128.13
ENST00000582811.6
CDS GCA 72 bp TGGCAGGAAGCAAGGGATGCGGGATGGGACAGCACCTaGTGCGCACGCGAGCCTGGGATGAGGTTGTCCGCG +
Preference number: 6 (lower is better)
Translates to: WQEARDAGWDST*CAREPGMRLSA
Trigger: CGCGGACAACCTCATCCCAGGCTCGCGTGCGCAGCAGGTGCTGTCCCATCCCGCATCCCTTGCTTCCTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577916.6
CDS GCA 72 bp ACATACTTGATGACCACCTGGAGTGCAGCAGGAGTTTaGCCGGGTCCCTGCCACCCCTCGCCGGGCAACCCC +
Preference number: 6 (lower is better)
Translates to: TYLMTTWSAAGV*PGPCHPSPGNP
Trigger: GGGGTTGCCCGGCGAGGGGTGGCAGGGACCCGGGCAAACTCCTGCTGCACTCCAGGTGGTCATCAAGTATGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582287.6
CDS CCA 72 bp GCGAAGAACAGGTGGCAGGAAGCAAGGGATGCGGGATaGGACAGCACCTGCTGCGCACGCGAGCCTGGGATG +
Preference number: 6 (lower is better)
Translates to: AKNRWQEARDAG*DSTCCAREPGM
Trigger: CATCCCAGGCTCGCGTGCGCAGCAGGTGCTGTCCCATCCCGCATCCCTTGCTTCCTGCCACCTGTTCTTCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577916.6
CDS CAA 72 bp CACATACTTGATGACCACCTGGAGTGCAGCAGGAGTTaGCCCGGGTCCCTGCCACCCCTCGCCGGGCAACCC +
Preference number: 6 (lower is better)
Translates to: HILDDHLECSRS*PGSLPPLAGQP
Trigger: GGGTTGCCCGGCGAGGGGTGGCAGGGACCCGGGCAAACTCCTGCTGCACTCCAGGTGGTCATCAAGTATGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582287.6
CDS CCA 72 bp AAGTTGGTTGTACATACTCTCGGACTCACAGAGGCCTaGGCTACTCAGTTCCCCGGGTGTCAAGTGAGGCCT +
Preference number: 6 (lower is better)
Translates to: KLVVHTLGLTEA*ATQFPGCQVRP
Trigger: AGGCCTCACTTGACACCCGGGGAACTGAGTAGCCCAGGCCTCTGTGAGTCCGAGAGTATGTACAACCAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577916.6
ENST00000583816.2