RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ISX (Homo sapiens)

Ensembl gene IDs: ENSG00000175329

Ensembl transcript IDs: ENST00000308700.6, ENST00000404699.7

Found 380 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTaGAGAAGGGATGCTCAGCGGATGACCTCCCTGAGAACAGGAACT +
Preference number: 1 (lower is better)
Translates to: QALSSTCKDKNQRHL*RRDAQRMTSLRTGT
Trigger: AGTTCCTGTTCTCAGGGAGGTCATCCGCTGAGCATCCCTTCTGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR GCA 90 bp GCAGAGGATCTGGGATTTGGGGAAGATTCCTGGAATTTAGGCTTGTaGAAGAGGTCATTCCAGGCTTCCCAGCTTAGGGGAGCAGGCCCT +
Preference number: 1 (lower is better)
Translates to: AEDLGFGEDSWNLGL*KRSFQASQLRGAGP
Trigger: AGGGCCTGCTCCCCTAAGCTGGGAAGCCTGGAATGACCTCTTGCACAAGCCTAAATTCCAGGAATCTTCCCCAAATCCCAGATCCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR GCA 90 bp CTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAGAAGGGATaGTCAGCGGATGACCTCCCTGAGAACAGGAACTACTCATCCTGG +
Preference number: 1 (lower is better)
Translates to: LHLQGQESETSVQKG*SADDLPENRNYSSW
Trigger: CCAGGATGAGTAGTTCCTGTTCTCAGGGAGGTCATCCGCTGAGCATCCCTTCTGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR CCA 90 bp GAACTACTCATCCTGGGCTGGCATCCAAAGCAGCCACTTTTGCAGTaGAATCTTGGAATAACAATATCACTCCACACTGGGCCTTGCCCT +
Preference number: 1 (lower is better)
Translates to: ELLILGWHPKQPLLQ*NLGITISLHTGPCP
Trigger: AGGGCAAGGCCCAGTGTGGAGTGATATTGTTATTCCAAGATTCCACTGCAAAAGTGGCTGCTTTGGATGCCAGCCCAGGATGAGTAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR TCA 90 bp CAGAACATGTGGTTTGCCCAGCGTCTTTGCATGGAAATAGGGAGTTaGATGAAAGCTCAGGCTTTCGAGGACAGAGTGAGGCTAGTCTTC +
Preference number: 1 (lower is better)
Translates to: QNMWFAQRLCMEIGS*MKAQAFEDRVRLVF
Trigger: GAAGACTAGCCTCACTCTGTCCTCGAAAGCCTGAGCTTTCATTCAACTCCCTATTTCCATGCAAAGACGCTGGGCAAACCACATGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR GCA 90 bp TTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGGATGAATGCATaGATGAACAAACAACCTCTCCTTGGCCTCCTCTGTGCCTCAGTG +
Preference number: 1 (lower is better)
Translates to: FMESSVGTHVSRMNA*MNKQPLLGLLCASV
Trigger: CACTGAGGCACAGAGGAGGCCAAGGAGAGGTTGTTTGTTCATGCATGCATTCATCCGTGACACATGAGTACCTACTGAGGACTCCATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR GCA 90 bp TCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGGATGAATaGATGCATGAACAAACAACCTCTCCTTGGCCTCCTCTGTGCCTC +
Preference number: 1 (lower is better)
Translates to: SVYGVLSRYSCVTDE*MHEQTTSPWPPLCL
Trigger: GAGGCACAGAGGAGGCCAAGGAGAGGTTGTTTGTTCATGCATGCATTCATCCGTGACACATGAGTACCTACTGAGGACTCCATAAACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR GCA 90 bp AGCACTTTTGCATCCTGTGGGCTGTTGTCTGTAGTTCTGGCATATTaGATGCCTGAAGGCAGAGCTAGCACTGCTACCTCCAATACAGAT +
Preference number: 1 (lower is better)
Translates to: STFASCGLLSVVLAY*MPEGRASTATSNTD
Trigger: ATCTGTATTGGAGGTAGCAGTGCTAGCTCTGCCTTCAGGCATGCAATATGCCAGAACTACAGACAACAGCCCACAGGATGCAAAAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR TCA 90 bp ACAGTCATAAAGAATGTGTTAGACTTGGGCCAACAGCAAGGTTGTTaGGCAAGTGTTCTGCTTTCAGAGGTGGGCCAGCACCACCTTTTG +
Preference number: 1 (lower is better)
Translates to: TVIKNVLDLGQQQGC*ASVLLSEVGQHHLL
Trigger: CAAAAGGTGGTGCTGGCCCACCTCTGAAAGCAGAACACTTGCTCAACAACCTTGCTGTTGGCCCAAGTCTAACACATTCTTTATGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR TCA 90 bp TTGCCCTCACTTTGCAAAATACTCTCATGTCCTCTCAGAGCCTCCTaGATGCTCTTTGAGGCAGGCCTGGCTACCTTCATTTTATGGATA +
Preference number: 1 (lower is better)
Translates to: LPSLCKILSCPLRAS*MLFEAGLATFILWI
Trigger: TATCCATAAAATGAAGGTAGCCAGGCCTGCCTCAAAGAGCATTCAGGAGGCTCTGAGAGGACATGAGAGTATTTTGCAAAGTGAGGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR TCA 90 bp GGTGCTAGAGACCTGGTGTTGATATCCACATTCATAGGCTCTGAGTaGTCTGGCATTTTTAAGATGGCAAAGCACTTTTGCATCCTGTGG +
Preference number: 1 (lower is better)
Translates to: GARDLVLISTFIGSE*SGIFKMAKHFCILW
Trigger: CCACAGGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAGATCACTCAGAGCCTATGAATGTGGATATCAACACCAGGTCTCTAGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR CCA 90 bp GCCACTTTTGCAGTGGAATCTTGGAATAACAATATCACTCCACACTaGGCCTTGCCCTCACTTTGCAAAATACTCTCATGTCCTCTCAGA +
Preference number: 1 (lower is better)
Translates to: ATFAVESWNNNITPH*ALPSLCKILSCPLR
Trigger: TCTGAGAGGACATGAGAGTATTTTGCAAAGTGAGGGCAAGGCCCAGTGTGGAGTGATATTGTTATTCCAAGATTCCACTGCAAAAGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR CCA 90 bp GACAGAGTGAGGCTAGTCTTCCAGCTGGTCCCTTTTCATATATCCTaGAAAGATAAACTGAATGAAAGGAGCTTTCCGTCCTACTTTTCA +
Preference number: 1 (lower is better)
Translates to: DRVRLVFQLVPFHIS*KDKLNERSFPSYFS
Trigger: TGAAAAGTAGGACGGAAAGCTCCTTTCATTCAGTTTATCTTTCCAGGATATATGAAAAGGGACCAGCTGGAAGACTAGCCTCACTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR TCA 90 bp CTCCTGGGTGGGTCAGGGGTGCAGGTAGATTGCAGAGGATCTGGGATTTGGGGATTTCAGAGCTCGGCCTaGGATCTCATCCAGCCTGTC +
Preference number: 2 (lower is better)
Translates to: LLGGSGVQVDCRGSGIWGFQSSA*DLIQPV
Trigger: GACAGGCTGGATGAGATCTCAGGCCGAGCTCTGAAA...TCCCCAAATCCCAGATCCTCTGCAATCTACCTGCACCCCTGACCCACCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR GCA 90 bp CTCCTGGGTGGGTCAGGGGTGCAGGTAGATTGCAGAGGATCTGGGATTTGGGGATCCTCTGTGCCTCAGTaGCCACCATGGAAGCGTCTT +
Preference number: 2 (lower is better)
Translates to: LLGGSGVQVDCRGSGIWGSSVPQ*PPWKRL
Trigger: AAGACGCTTCCATGGTGGGCACTGAGGCACAGAGGA...TCCCCAAATCCCAGATCCTCTGCAATCTACCTGCACCCCTGACCCACCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR GCA 90 bp CTCCTGGGTGGGTCAGGGGTGCAGGTAGATTGCAGAGGATCTGGGATTTGGGGAGTTGAGCAAGTGTTCTaGTTTCAGAGGTGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: LLGGSGVQVDCRGSGIWGVEQVF*FQRWAS
Trigger: GCTGGCCCACCTCTGAAAGCAGAACACTTGCTCAAC...TCCCCAAATCCCAGATCCTCTGCAATCTACCTGCACCCCTGACCCACCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CCA 90 bp CTCCTGGGTGGGTCAGGGGTGCAGGTAGATTGCAGAGGATCTGGGATTTGGGGAGTGCAGCCTTCCAACTaGCATGTTCAGGGTAGCTTC +
Preference number: 2 (lower is better)
Translates to: LLGGSGVQVDCRGSGIWGVQPSN*HVQGSF
Trigger: GAAGCTACCCTGAACATGCCAGTTGGAAGGCTGCAC...TCCCCAAATCCCAGATCCTCTGCAATCTACCTGCACCCCTGACCCACCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR GCA 90 bp ACAGGAACTACTCATCCTGGGCTGGCATCCAAAGCAGCCACTTTTGCAGTGGAAGGCCCAGGGCACATCTaGTACCTGCCTTCACCTGGA +
Preference number: 2 (lower is better)
Translates to: TGTTHPGLASKAATFAVEGPGHI*YLPSPG
Trigger: TCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCC...TTCCACTGCAAAAGTGGCTGCTTTGGATGCCAGCCCAGGATGAGTAGTTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR CAA 90 bp TCCAACTGGCATGTTCAGGGTAGCTTCCTGGGCTGTGGGCCATTTTaGGATTGTGAAATCGATTTCCCCAGAGGCCCAGGGCACATCTGC +
Preference number: 2 (lower is better)
Translates to: SNWHVQGSFLGCGPF*DCEIDFPRGPGHIC
Trigger: GCAGATGTGCCCTGGGCCTCTGGGGAAATCGATTTCACAATCCAAAAATGGCCCACAGCCCAGGAAGCTACCCTGAACATGCCAGTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR TCA 90 bp GTGGGCCAGCACCACCTTTTGACAAACGTGGACAGAACCCAAATTGTTTATCTCGAGGTCCAGAGAGGGTaGGTGACCGGCTGGAGGTCA +
Preference number: 2 (lower is better)
Translates to: VGQHHLLTNVDRTQIVYLEVQRG*VTGWRS
Trigger: TGACCTCCAGCCGGTCACTCACCCTCTCTGGACCTC...GAGATAAACAATTTGGGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR TCA 90 bp AATCAGAGACATCTGTGCAGAAGGGATGCTCAGCGGATGACCTCCCTGAGAACAGCCAGCACCACCTTTTaGCAAACGTGGACAGAACCC +
Preference number: 2 (lower is better)
Translates to: NQRHLCRRDAQRMTSLRTASTTF*QTWTEP
Trigger: GGGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGC...TGTTCTCAGGGAGGTCATCCGCTGAGCATCCCTTCTGCACAGATGTCTCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR TCA 90 bp CTCCTGGGTGGGTCAGGGGTGCAGGTAGATTGCAGAGGATCTGGGATTTGGGGACATTTGTGCCAGAAATaGCAACATCCCTTTCCCATC +
Preference number: 2 (lower is better)
Translates to: LLGGSGVQVDCRGSGIWGHLCQK*QHPFPI
Trigger: GATGGGAAAGGGATGTTGTCATTTCTGGCACAAATG...TCCCCAAATCCCAGATCCTCTGCAATCTACCTGCACCCCTGACCCACCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR GCA 90 bp CCAACTGGCATGTTCAGGGTAGCTTCCTGGGCTGTGGGCCATTTTTGGATTGTGGGCACATCTGCTACCTaGCTTCACCTGGAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: PTGMFRVASWAVGHFWIVGTSAT*LHLERK
Trigger: TTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCC...CACAATCCAAAAATGGCCCACAGCCCAGGAAGCTACCCTGAACATGCCAGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR CAA 90 bp ATTGCAGAGGATCTGGGATTTGGGGAAGATTCCTGGAATTTAGGCTaGTGCAAGAGGTCATTCCAGGCTTCCCAGCTTAGGGGAGCAGGC +
Preference number: 2 (lower is better)
Translates to: IAEDLGFGEDSWNLG*CKRSFQASQLRGAG
Trigger: GCCTGCTCCCCTAAGCTGGGAAGCCTGGAATGACCTCTTGCACAAGCCTAAATTCCAGGAATCTTCCCCAAATCCCAGATCCTCTGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR TCA 90 bp GGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAGGCCATTTTTGGATTGTaGAATCGATTTCCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: GAGPVLHLQGQESETSVQAIFGL*NRFPQR
Trigger: CCTCTGGGGAAATCGATTTCACAATCCAAAAATGGC...CTGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR GCA 90 bp AACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCCTGAGATCTCAGGCACATCTGCTACCTaGCTTCACCTGGAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: NTGAGGLPPYFRARPEISGTSAT*LHLERK
Trigger: TTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCC...TGAGATCTCAGGCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR GCA 90 bp GGGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCATGTGTCACGGATGAATaGATGCATGAACAAACAACC +
Preference number: 2 (lower is better)
Translates to: GSRPCPPPARTRIRDICACVTDE*MHEQTT
Trigger: GGTTGTTTGTTCATGCATGCATTCATCCGTGACACA...TGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CCA 90 bp ACAGGAACTACTCATCCTGGGCTGGCATCCAAAGCAGCCACTTTTGCAGTGGAAACCTGGAGAGGAAAGTaGCTCATTTGGGGAGAGCAT +
Preference number: 2 (lower is better)
Translates to: TGTTHPGLASKAATFAVETWRGK*LIWGEH
Trigger: ATGCTCTCCCCAAATGAGCCACTTTCCTCTCCAGGT...TTCCACTGCAAAAGTGGCTGCTTTGGATGCCAGCCCAGGATGAGTAGTTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CCA 90 bp AGCCTTCTCCTTTCATCCAGCGGTGCTAGAGACCTGGTGTTGATATCCACATTCGTGCAGCCTTCCAACTaGCATGTTCAGGGTAGCTTC +
Preference number: 2 (lower is better)
Translates to: SLLLSSSGARDLVLISTFVQPSN*HVQGSF
Trigger: GAAGCTACCCTGAACATGCCAGTTGGAAGGCTGCAC...GAATGTGGATATCAACACCAGGTCTCTAGCACCGCTGGATGAAAGGAGAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CCA 90 bp AGCCTTCTCCTTTCATCCAGCGGTGCTAGAGACCTGGTGTTGATATCCACATTCAGGAACTACTCATCCTaGGCTGGCATCCAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: SLLLSSSGARDLVLISTFRNYSS*AGIQSS
Trigger: GCTGCTTTGGATGCCAGCCCAGGATGAGTAGTTCCT...GAATGTGGATATCAACACCAGGTCTCTAGCACCGCTGGATGAAAGGAGAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR CAA 90 bp GCTCACAGTCATAAAGAATGTGTTAGACTTGGGCCAACAGCAAGGTaGTTGAGCAAGTGTTCTGCTTTCAGAGGTGGGCCAGCACCACCT +
Preference number: 2 (lower is better)
Translates to: AHSHKECVRLGPTAR*LSKCSAFRGGPAPP
Trigger: AGGTGGTGCTGGCCCACCTCTGAAAGCAGAACACTTGCTCAACAACCTTGCTGTTGGCCCAAGTCTAACACATTCTTTATGACTGTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR TCA 90 bp TGGGTACCTGCTACCCAAGTGATGAGCTACTGCCTTTGTTTGTTAACTGCTCTTTTTCAGAGCTCGGCCTaGGATCTCATCCAGCCTGTC +
Preference number: 2 (lower is better)
Translates to: WVPATQVMSYCLCLLTALFQSSA*DLIQPV
Trigger: GACAGGCTGGATGAGATCTCAGGCCGAGCTCTGAAA...AAGAGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTGGGTAGCAGGTACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR GCA 90 bp AGCCTTCTCCTTTCATCCAGCGGTGCTAGAGACCTGGTGTTGATATCCACATTCAATCAGAGACATCTGTaGAGAAGGGATGCTCAGCGG +
Preference number: 2 (lower is better)
Translates to: SLLLSSSGARDLVLISTFNQRHL*RRDAQR
Trigger: CCGCTGAGCATCCCTTCTGCACAGATGTCTCTGATT...GAATGTGGATATCAACACCAGGTCTCTAGCACCGCTGGATGAAAGGAGAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CCA 90 bp AATCAGAGACATCTGTGCAGAAGGGATGCTCAGCGGATGACCTCCCTGAGAACAGGAAAGTGGCTCATTTaGGGAGAGCATGTCCAATCT +
Preference number: 2 (lower is better)
Translates to: NQRHLCRRDAQRMTSLRTGKWLI*GEHVQS
Trigger: AGATTGGACATGCTCTCCCCAAATGAGCCACTTTCC...TGTTCTCAGGGAGGTCATCCGCTGAGCATCCCTTCTGCACAGATGTCTCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR CAA 90 bp GAACAGGAACTACTCATCCTGGGCTGGCATCCAAAGCAGCCACTTTaGCAGTGGAATCTTGGAATAACAATATCACTCCACACTGGGCCT +
Preference number: 2 (lower is better)
Translates to: EQELLILGWHPKQPL*QWNLGITISLHTGP
Trigger: AGGCCCAGTGTGGAGTGATATTGTTATTCCAAGATTCCACTGCAAAAGTGGCTGCTTTGGATGCCAGCCCAGGATGAGTAGTTCCTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR TCA 90 bp AATCAGAGACATCTGTGCAGAAGGGATGCTCAGCGGATGACCTCCCTGAGAACACATTTGTGCCAGAAATaGCAACATCCCTTTCCCATC +
Preference number: 2 (lower is better)
Translates to: NQRHLCRRDAQRMTSLRTHLCQK*QHPFPI
Trigger: GATGGGAAAGGGATGTTGTCATTTCTGGCACAAATG...TGTTCTCAGGGAGGTCATCCGCTGAGCATCCCTTCTGCACAGATGTCTCTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CCA 90 bp GTGGGCCAGCACCACCTTTTGACAAACGTGGACAGAACCCAAATTGTTTATCTCCTACCTGCCTTCACCTaGAGAGGAAAGTGGCTCATT +
Preference number: 2 (lower is better)
Translates to: VGQHHLLTNVDRTQIVYLLPAFT*RGKWLI
Trigger: AATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAG...GAGATAAACAATTTGGGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CCA 90 bp ATCTCTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGTTCAGGGTAGCTTCCTaGGCTGTGGGCCATTTTTGG +
Preference number: 2 (lower is better)
Translates to: ISVSRSVYGVLSRYSCVTFRVAS*AVGHFW
Trigger: CCAAAAATGGCCCACAGCCCAGGAAGCTACCCTGAA...CGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR CAA 90 bp ACCAGGAGAGCAGCTTTAGCCAGGAGAGAAGAGAGCTGTCCTTTATaGTTTAGTTTGCTTTTGAGTCTGGTGCAGCCTTCCAACTGGCAT +
Preference number: 2 (lower is better)
Translates to: TRRAALARREESCPL*FSLLLSLVQPSNWH
Trigger: ATGCCAGTTGGAAGGCTGCACCAGACTCAAAAGCAAACTAAACAATAAAGGACAGCTCTCTTCTCTCCTGGCTAAAGCTGCTCTCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR CAA 90 bp ACAGAACATGTGGTTTGCCCAGCGTCTTTGCATGGAAATAGGGAGTaGAATGAAAGCTCAGGCTTTCGAGGACAGAGTGAGGCTAGTCTT +
Preference number: 2 (lower is better)
Translates to: TEHVVCPASLHGNRE*NESSGFRGQSEASL
Trigger: AAGACTAGCCTCACTCTGTCCTCGAAAGCCTGAGCTTTCATTCAACTCCCTATTTCCATGCAAAGACGCTGGGCAAACCACATGTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR GCA 90 bp GATAAACTGAATGAAAGGAGCTTTCCGTCCTACTTTTCATTTGTGCCAGAAATGGGCCCAGGGCACATCTaGTACCTGCCTTCACCTGGA +
Preference number: 2 (lower is better)
Translates to: DKLNERSFPSYFSFVPEMGPGHI*YLPSPG
Trigger: TCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCC...CATTTCTGGCACAAATGAAAAGTAGGACGGAAAGCTCCTTTCATTCAGTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR GCA 90 bp AGCCTTCTCCTTTCATCCAGCGGTGCTAGAGACCTGGTGTTGATATCCACATTCTGGAATTTAGGCTTGTaGAAGAGGTCATTCCAGGCT +
Preference number: 2 (lower is better)
Translates to: SLLLSSSGARDLVLISTFWNLGL*KRSFQA
Trigger: AGCCTGGAATGACCTCTTGCACAAGCCTAAATTCCA...GAATGTGGATATCAACACCAGGTCTCTAGCACCGCTGGATGAAAGGAGAAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CCA 90 bp GTGGGCCAGCACCACCTTTTGACAAACGTGGACAGAACCCAAATTGTTTATCTCGGAAAGTGGCTCATTTaGGGAGAGCATGTCCAATCT +
Preference number: 2 (lower is better)
Translates to: VGQHHLLTNVDRTQIVYLGKWLI*GEHVQS
Trigger: AGATTGGACATGCTCTCCCCAAATGAGCCACTTTCC...GAGATAAACAATTTGGGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CCA 90 bp TTCTGGCATATTGCATGCCTGAAGGCAGAGCTAGCACTGCTACCTCCAATACAGAGATTGCAGAGGATCTaGGATTTGGGGAAGATTCCT +
Preference number: 2 (lower is better)
Translates to: FWHIACLKAELALLPPIQRLQRI*DLGKIP
Trigger: AGGAATCTTCCCCAAATCCCAGATCCTCTGCAATCT...CTGTATTGGAGGTAGCAGTGCTAGCTCTGCCTTCAGGCATGCAATATGCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR CAA 90 bp TTAGCCAGGAGAGAAGAGAGCTGTCCTTTATTGTTTAGTTTGCTTTaGAGTCTGGTGCAGCCTTCCAACTGGCATGTTCAGGGTAGCTTC +
Preference number: 2 (lower is better)
Translates to: LARREESCPLLFSLL*SLVQPSNWHVQGSF
Trigger: GAAGCTACCCTGAACATGCCAGTTGGAAGGCTGCACCAGACTCAAAAGCAAACTAAACAATAAAGGACAGCTCTCTTCTCTCCTGGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR GCA 90 bp TCCTACTTTTCATTTGTGCCAGAAATGACAACATCCCTTTCCCATCCAGCAAGAGTTGAGCAAGTGTTCTaGTTTCAGAGGTGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: SYFSFVPEMTTSLSHPARVEQVF*FQRWAS
Trigger: GCTGGCCCACCTCTGAAAGCAGAACACTTGCTCAAC...TCTTGCTGGATGGGAAAGGGATGTTGTCATTTCTGGCACAAATGAAAAGTAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CCA 90 bp TTCTGGCATATTGCATGCCTGAAGGCAGAGCTAGCACTGCTACCTCCAATACAGAGAGGATCTGGGATTTaGGGAAGATTCCTGGAATTT +
Preference number: 2 (lower is better)
Translates to: FWHIACLKAELALLPPIQRGSGI*GRFLEF
Trigger: AAATTCCAGGAATCTTCCCCAAATCCCAGATCCTCT...CTGTATTGGAGGTAGCAGTGCTAGCTCTGCCTTCAGGCATGCAATATGCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR TCA 90 bp AGTGATCTGGCATTTTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGGCCATTTTTGGATTGTaGAATCGATTTCCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: SDLAFLRWQSTFASCGLLAIFGL*NRFPQR
Trigger: CCTCTGGGGAAATCGATTTCACAATCCAAAAATGGC...CAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAGATCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR GCA 90 bp AGTGATCTGGCATTTTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGTGTGTCACGGATGAATaGATGCATGAACAAACAACC +
Preference number: 2 (lower is better)
Translates to: SDLAFLRWQSTFASCGLLCVTDE*MHEQTT
Trigger: GGTTGTTTGTTCATGCATGCATTCATCCGTGACACA...CAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAGATCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CCA 90 bp GATAAACTGAATGAAAGGAGCTTTCCGTCCTACTTTTCATTTGTGCCAGAAATGACCTGGAGAGGAAAGTaGCTCATTTGGGGAGAGCAT +
Preference number: 2 (lower is better)
Translates to: DKLNERSFPSYFSFVPEMTWRGK*LIWGEH
Trigger: ATGCTCTCCCCAAATGAGCCACTTTCCTCTCCAGGT...CATTTCTGGCACAAATGAAAAGTAGGACGGAAAGCTCCTTTCATTCAGTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CCA 90 bp TGGGTACCTGCTACCCAAGTGATGAGCTACTGCCTTTGTTTGTTAACTGCTCTTCTGGCATTTTTAAGATaGCAAAGCACTTTTGCATCC +
Preference number: 2 (lower is better)
Translates to: WVPATQVMSYCLCLLTALLAFLR*QSTFAS
Trigger: GGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAG...AAGAGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTGGGTAGCAGGTACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR TCA 90 bp GATAAACTGAATGAAAGGAGCTTTCCGTCCTACTTTTCATTTGTGCCAGAAATGCAACAGCAAGGTTGTTaGGCAAGTGTTCTGCTTTCA +
Preference number: 2 (lower is better)
Translates to: DKLNERSFPSYFSFVPEMQQQGC*ASVLLS
Trigger: TGAAAGCAGAACACTTGCTCAACAACCTTGCTGTTG...CATTTCTGGCACAAATGAAAAGTAGGACGGAAAGCTCCTTTCATTCAGTTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CCA 90 bp TGGGTACCTGCTACCCAAGTGATGAGCTACTGCCTTTGTTTGTTAACTGCTCTTTTTGCAGTGGAATCTTaGAATAACAATATCACTCCA +
Preference number: 2 (lower is better)
Translates to: WVPATQVMSYCLCLLTALFAVES*NNNITP
Trigger: TGGAGTGATATTGTTATTCCAAGATTCCACTGCAAA...AAGAGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTGGGTAGCAGGTACCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CCA 90 bp AGTGATCTGGCATTTTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGCAGCCACTTTTGCAGTaGAATCTTGGAATAACAATA +
Preference number: 2 (lower is better)
Translates to: SDLAFLRWQSTFASCGLLQPLLQ*NLGITI
Trigger: TATTGTTATTCCAAGATTCCACTGCAAAAGTGGCTG...CAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAGATCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR GCA 90 bp GATAAACTGAATGAAAGGAGCTTTCCGTCCTACTTTTCATTTGTGCCAGAAATGTCACGGATGAATGCATaGATGAACAAACAACCTCTC +
Preference number: 2 (lower is better)
Translates to: DKLNERSFPSYFSFVPEMSRMNA*MNKQPL
Trigger: GAGAGGTTGTTTGTTCATGCATGCATTCATCCGTGA...CATTTCTGGCACAAATGAAAAGTAGGACGGAAAGCTCCTTTCATTCAGTTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CCA 90 bp AGTGATCTGGCATTTTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGTTTGCAGTGGAATCTTaGAATAACAATATCACTCCA +
Preference number: 2 (lower is better)
Translates to: SDLAFLRWQSTFASCGLLFAVES*NNNITP
Trigger: TGGAGTGATATTGTTATTCCAAGATTCCACTGCAAA...CAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAGATCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CAA 90 bp AGACCTAGGCTTCCCAACTCCCGGTCCAACTCCTGGGTGGGTCAGGGGTGCAGGAAGAATGTGTTAGACTaGGGCCAACAGCAAGGTTGT +
Preference number: 3 (lower is better)
Translates to: RPRLPNSRSNSWVGQGCRKNVLD*GQQQGC
Trigger: ACAACCTTGCTGTTGGCCCAAGTCTAACACATTCTT...CCTGCACCCCTGACCCACCCAGGAGTTGGACCGGGAGTTGGGAAGCCTAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR GCA 72 bp TGTGAAATCGATTTCCCCAGAGGCCCAGGGCACATCTaGTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: CEIDFPRGPGHI*YLPSPGEESGS
Trigger: TGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCCTCTGGGGAAATCGATTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CAA 90 bp GGGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAAGGAAAGTGGCTCATTaGGGGAGAGCATGTCCAATC +
Preference number: 3 (lower is better)
Translates to: GSRPCPPPARTRIRDICARKVAH*GRACPI
Trigger: GATTGGACATGCTCTCCCCAAATGAGCCACTTTCCT...TGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CAA 90 bp CTCCTGGGTGGGTCAGGGGTGCAGGTAGATTGCAGAGGATCTGGGATTTGGGGATCCTGGAATTTAGGCTaGTGCAAGAGGTCATTCCAG +
Preference number: 3 (lower is better)
Translates to: LLGGSGVQVDCRGSGIWGSWNLG*CKRSFQ
Trigger: CTGGAATGACCTCTTGCACAAGCCTAAATTCCAGGA...TCCCCAAATCCCAGATCCTCTGCAATCTACCTGCACCCCTGACCCACCCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR TCA 72 bp CAGAAATCATCTTATCCAGCTGGCTCCTCTTACAGATaGGGTCCAGAGAGGGTGAGTGACCGGCTGGAGGTC +
Preference number: 3 (lower is better)
Translates to: QKSSYPAGSSYR*GPERVSDRLEV
Trigger: GACCTCCAGCCGGTCACTCACCCTCTCTGGACCTCATCTGTAAGAGGAGCCAGCTGGATAAGATGATTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR CCA 72 bp TTTAGTTTGCTTTTGAGTCTGGTGCAGCCTTCCAACTaGCATGTTCAGGGTAGCTTCCTGGGCTGTGGGCCA +
Preference number: 3 (lower is better)
Translates to: FSLLLSLVQPSN*HVQGSFLGCGP
Trigger: TGGCCCACAGCCCAGGAAGCTACCCTGAACATGCCAGTTGGAAGGCTGCACCAGACTCAAAAGCAAACTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CAA 90 bp AGCCTTCTCCTTTCATCCAGCGGTGCTAGAGACCTGGTGTTGATATCCACATTCGGCCAGCACCACCTTTaGACAAACGTGGACAGAACC +
Preference number: 3 (lower is better)
Translates to: SLLLSSSGARDLVLISTFGQHHL*TNVDRT
Trigger: GGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCC...GAATGTGGATATCAACACCAGGTCTCTAGCACCGCTGGATGAAAGGAGAAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CAA 90 bp ACAGGAACTACTCATCCTGGGCTGGCATCCAAAGCAGCCACTTTTGCAGTGGAAGGGCCAACAGCAAGGTaGTTGAGCAAGTGTTCTGCT +
Preference number: 3 (lower is better)
Translates to: TGTTHPGLASKAATFAVEGPTAR*LSKCSA
Trigger: AGCAGAACACTTGCTCAACAACCTTGCTGTTGGCCC...TTCCACTGCAAAAGTGGCTGCTTTGGATGCCAGCCCAGGATGAGTAGTTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CAA 90 bp GGGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAAAGAATGTGTTAGACTaGGGCCAACAGCAAGGTTGT +
Preference number: 3 (lower is better)
Translates to: GSRPCPPPARTRIRDICAKNVLD*GQQQGC
Trigger: ACAACCTTGCTGTTGGCCCAAGTCTAACACATTCTT...TGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR GCA 72 bp CTGGGATTTGGGGAAGATTCCTGGAATTTAGGCTTGTaGAAGAGGTCATTCCAGGCTTCCCAGCTTAGGGGA +
Preference number: 3 (lower is better)
Translates to: LGFGEDSWNLGL*KRSFQASQLRG
Trigger: TCCCCTAAGCTGGGAAGCCTGGAATGACCTCTTGCACAAGCCTAAATTCCAGGAATCTTCCCCAAATCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CAA 90 bp TTGAATGAAAGCTCAGGCTTTCGAGGACAGAGTGAGGCTAGTCTTCCAGCTGGTAGGAAAGTGGCTCATTaGGGGAGAGCATGTCCAATC +
Preference number: 3 (lower is better)
Translates to: LNESSGFRGQSEASLPAGRKVAH*GRACPI
Trigger: GATTGGACATGCTCTCCCCAAATGAGCCACTTTCCT...ACCAGCTGGAAGACTAGCCTCACTCTGTCCTCGAAAGCCTGAGCTTTCATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR TCA 72 bp AAGAATGTGTTAGACTTGGGCCAACAGCAAGGTTGTTaGGCAAGTGTTCTGCTTTCAGAGGTGGGCCAGCAC +
Preference number: 3 (lower is better)
Translates to: KNVLDLGQQQGC*ASVLLSEVGQH
Trigger: GTGCTGGCCCACCTCTGAAAGCAGAACACTTGCTCAACAACCTTGCTGTTGGCCCAAGTCTAACACATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR TCA 72 bp TGGTTTGCCCAGCGTCTTTGCATGGAAATAGGGAGTTaGATGAAAGCTCAGGCTTTCGAGGACAGAGTGAGG +
Preference number: 3 (lower is better)
Translates to: WFAQRLCMEIGS*MKAQAFEDRVR
Trigger: CCTCACTCTGTCCTCGAAAGCCTGAGCTTTCATTCAACTCCCTATTTCCATGCAAAGACGCTGGGCAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR TCA 72 bp ACTCTCATGTCCTCTCAGAGCCTCCTGAATGCTCTTTaGGGCAGGCCTGGCTACCTTCATTTTATGGATAGG +
Preference number: 3 (lower is better)
Translates to: TLMSSQSLLNAL*GRPGYLHFMDR
Trigger: CCTATCCATAAAATGAAGGTAGCCAGGCCTGCCTCAAAGAGCATTCAGGAGGCTCTGAGAGGACATGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR GCA 72 bp GGAGTCCTCAGTAGGTACTCATGTGTCACGGATGAATaGATGCATGAACAAACAACCTCTCCTTGGCCTCCT +
Preference number: 3 (lower is better)
Translates to: GVLSRYSCVTDE*MHEQTTSPWPP
Trigger: AGGAGGCCAAGGAGAGGTTGTTTGTTCATGCATGCATTCATCCGTGACACATGAGTACCTACTGAGGACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR CCA 72 bp TGCAGCCTTCCAACTGGCATGTTCAGGGTAGCTTCCTaGGCTGTGGGCCATTTTTGGATTGTGAAATCGATT +
Preference number: 3 (lower is better)
Translates to: CSLPTGMFRVAS*AVGHFWIVKSI
Trigger: AATCGATTTCACAATCCAAAAATGGCCCACAGCCCAGGAAGCTACCCTGAACATGCCAGTTGGAAGGCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR CCA 72 bp ACCATGGAAGCGTCTTCAGAAATCATCTTATCCAGCTaGCTCCTCTTACAGATGAGGTCCAGAGAGGGTGAG +
Preference number: 3 (lower is better)
Translates to: TMEASSEIILSS*LLLQMRSREGE
Trigger: CTCACCCTCTCTGGACCTCATCTGTAAGAGGAGCCAGCTGGATAAGATGATTTCTGAAGACGCTTCCATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR-3UTR CAA 90 bp AGTGATCTGGCATTTTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGGGCCAGCACCACCTTTaGACAAACGTGGACAGAACC +
Preference number: 3 (lower is better)
Translates to: SDLAFLRWQSTFASCGLLGQHHL*TNVDRT
Trigger: GGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCC...CAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAGATCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR TCA 72 bp CTTTGCAAAATACTCTCATGTCCTCTCAGAGCCTCCTaGATGCTCTTTGAGGCAGGCCTGGCTACCTTCATT +
Preference number: 3 (lower is better)
Translates to: LCKILSCPLRAS*MLFEAGLATFI
Trigger: AATGAAGGTAGCCAGGCCTGCCTCAAAGAGCATTCAGGAGGCTCTGAGAGGACATGAGAGTATTTTGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR CCA 72 bp ATCCTGGGCTGGCATCCAAAGCAGCCACTTTTGCAGTaGAATCTTGGAATAACAATATCACTCCACACTGGG +
Preference number: 3 (lower is better)
Translates to: ILGWHPKQPLLQ*NLGITISLHTG
Trigger: CCCAGTGTGGAGTGATATTGTTATTCCAAGATTCCACTGCAAAAGTGGCTGCTTTGGATGCCAGCCCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR TCA 72 bp GTGTTCTGCTTTCAGAGGTGGGCCAGCACCACCTTTTaGCAAACGTGGACAGAACCCAAATTGTTTATCTCT +
Preference number: 3 (lower is better)
Translates to: VFCFQRWASTTF*QTWTEPKLFIS
Trigger: AGAGATAAACAATTTGGGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCCCACCTCTGAAAGCAGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR GCA 72 bp GCAAAATACTCTCATGTCCTCTCAGAGCCTCCTGAATaGTCTTTGAGGCAGGCCTGGCTACCTTCATTTTAT +
Preference number: 3 (lower is better)
Translates to: AKYSHVLSEPPE*SLRQAWLPSFY
Trigger: ATAAAATGAAGGTAGCCAGGCCTGCCTCAAAGAGCATTCAGGAGGCTCTGAGAGGACATGAGAGTATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR TCA 72 bp GACCTGGTGTTGATATCCACATTCATAGGCTCTGAGTaGTCTGGCATTTTTAAGATGGCAAAGCACTTTTGC +
Preference number: 3 (lower is better)
Translates to: DLVLISTFIGSE*SGIFKMAKHFC
Trigger: GCAAAAGTGCTTTGCCATCTTAAAAATGCCAGATCACTCAGAGCCTATGAATGTGGATATCAACACCAGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR GCA 72 bp AATCTTGGAATAACAATATCACTCCACACTGGGCCTTaGCCTCACTTTGCAAAATACTCTCATGTCCTCTCA +
Preference number: 3 (lower is better)
Translates to: NLGITISLHTGP*PHFAKYSHVLS
Trigger: TGAGAGGACATGAGAGTATTTTGCAAAGTGAGGGCAAGGCCCAGTGTGGAGTGATATTGTTATTCCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AGACCTAGGCTTCCCAACTCCCGGTCCAACTCCTGGGTGGGTCAGGGGTGCAGGGAGGTTGATCCTGGCTaGCAGCTGGCTGCGGATGTG +
Preference number: 4 (lower is better)
Translates to: RPRLPNSRSNSWVGQGCREVDPG*QLAADV
Trigger: CACATCCGCAGCCAGCTGGCAGCCAGGATCAACCTC...CCTGCACCCCTGACCCACCCAGGAGTTGGACCGGGAGTTGGGAAGCCTAGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AGACCTAGGCTTCCCAACTCCCGGTCCAACTCCTGGGTGGGTCAGGGGTGCAGGAGGCTGTGTTTCCCATaGGTGCGCTGGGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: RPRLPNSRSNSWVGQGCRRLCFP*VRWEEG
Trigger: ACCCTCCTCCCAGCGCACCCATGGGAAACACAGCCT...CCTGCACCCCTGACCCACCCAGGAGTTGGACCGGGAGTTGGGAAGCCTAGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp CTCCTGGGTGGGTCAGGGGTGCAGGTAGATTGCAGAGGATCTGGGATTTGGGGAGAGCTTCTGGGAGGTTaGTCCTGGCTGCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLGGSGVQVDCRGSGIWGELLGG*SWLPAG
Trigger: GCCAGCTGGCAGCCAGGATCAACCTCCCAGAAGCTC...TCCCCAAATCCCAGATCCTCTGCAATCTACCTGCACCCCTGACCCACCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp CTCCTGGGTGGGTCAGGGGTGCAGGTAGATTGCAGAGGATCTGGGATTTGGGGAAGGAAAGGGGGTCCCTaGGTGCTGCCAGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LLGGSGVQVDCRGSGIWGRKGGP*VLPGLS
Trigger: AGACAGGCCTGGCAGCACCCAGGGACCCCCTTTCCT...TCCCCAAATCCCAGATCCTCTGCAATCTACCTGCACCCCTGACCCACCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AGACCTAGGCTTCCCAACTCCCGGTCCAACTCCTGGGTGGGTCAGGGGTGCAGGCCACAGGGACTTCCATaGGCAGGTCACAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RPRLPNSRSNSWVGQGCRPQGLP*AGHSRR
Trigger: TCTTCTGCTGTGACCTGCCCATGGAAGTCCCTGTGG...CCTGCACCCCTGACCCACCCAGGAGTTGGACCGGGAGTTGGGAAGCCTAGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AGACCTAGGCTTCCCAACTCCCGGTCCAACTCCTGGGTGGGTCAGGGGTGCAGGCCACATCCAGATTTGTaGGCAGGGCCACACTGGCTT +
Preference number: 4 (lower is better)
Translates to: RPRLPNSRSNSWVGQGCRPHPDL*AGPHWL
Trigger: AAGCCAGTGTGGCCCTGCCCACAAATCTGGATGTGG...CCTGCACCCCTGACCCACCCAGGAGTTGGACCGGGAGTTGGGAAGCCTAGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp CCAACTGGCATGTTCAGGGTAGCTTCCTGGGCTGTGGGCCATTTTTGGATTGTGCCTGCAGGTGGAGGCTaGGGAAAGGGGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PTGMFRVASWAVGHFWIVPAGGG*GKGVPG
Trigger: CCCAGGGACCCCCTTTCCTCAGCCTCCACCTGCAGG...CACAATCCAAAAATGGCCCACAGCCCAGGAAGCTACCCTGAACATGCCAGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAGAAGGGGGTCCCTGGGTaGTGCCAGGCCTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GAGPVLHLQGQESETSVQKGVPG*CQACLF
Trigger: GAAGAGACAGGCCTGGCAGCACCCAGGGACCCCCTT...CTGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAGAGGAAAGGGGGTCCCTaGGTGCTGCCAGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: GAGPVLHLQGQESETSVQRKGGP*VLPGLS
Trigger: AGACAGGCCTGGCAGCACCCAGGGACCCCCTTTCCT...CTGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTTTCCCATGGGTGCGCTaGGAGGAGGGTGATCCAGGC +
Preference number: 4 (lower is better)
Translates to: GPGHICYLPSPGEESGSFFPWVR*EEGDPG
Trigger: GCCTGGATCACCCTCCTCCCAGCGCACCCATGGGAA...AAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp CTCCTGGGTGGGTCAGGGGTGCAGGTAGATTGCAGAGGATCTGGGATTTGGGGAGGTCCAACTCCTGGGTaGGTCAGGGGTGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: LLGGSGVQVDCRGSGIWGGPTPG*VRGAGR
Trigger: TCTACCTGCACCCCTGACCCACCCAGGAGTTGGACC...TCCCCAAATCCCAGATCCTCTGCAATCTACCTGCACCCCTGACCCACCCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp CCAACTGGCATGTTCAGGGTAGCTTCCTGGGCTGTGGGCCATTTTTGGATTGTGTTAGGCCAGGATCCCTaGGGTCACCGCCCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: PTGMFRVASWAVGHFWIVLGQDP*GHRPVA
Trigger: CGCCACTGGGCGGTGACCTCAGGGATCCTGGCCTAA...CACAATCCAAAAATGGCCCACAGCCCAGGAAGCTACCCTGAACATGCCAGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS-3UTR TCA 90 bp AGGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTGCAGCTGCTCAGTGGTaGAGGTGGTACGAACCCTCC +
Preference number: 4 (lower is better)
Translates to: RPRAHLLPAFTWRGKWLIAAAQW*RWYEPS
Trigger: GGAGGGTTCGTACCACCTTCACCACTGAGCAGCTGC...AATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp CTCCTGGGTGGGTCAGGGGTGCAGGTAGATTGCAGAGGATCTGGGATTTGGGGACCTCTCAGAGCCTCCTaGATGCTCTTTGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LLGGSGVQVDCRGSGIWGPLRAS*MLFEAG
Trigger: GCCTGCCTCAAAGAGCATTCAGGAGGCTCTGAGAGG...TCCCCAAATCCCAGATCCTCTGCAATCTACCTGCACCCCTGACCCACCCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AGGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTCTGATTCTTCTCAGGTaGCTCTGGGCTGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RPRAHLLPAFTWRGKWLILILLR*LWAGPG
Trigger: GCCAGGGCCAGCCCAGAGGCACCTGAGAAGAATCAG...AATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTCCTGTCTCTTCTCTGTaGCAGGGCTGGGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GPGHICYLPSPGEESGSFPVSSL*QGWAEL
Trigger: CAGCTCAGCCCAGCCCTGGCACAGAGAAGAGACAGG...AAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTGGGGAGAGCGCATCAGTGCTCCTaGTGTCCTGCAGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GTSATCLHLERKVAHLGRAHQCS*CPAGGG
Trigger: GCCTCCACCTGCAGGACAGCAGGAGCACTGATGCGC...TCTCCCCAAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AGGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTGGCTGCCAGCTGGCTaGGGATGTGAACGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: RPRAHLLPAFTWRGKWLIWLPAG*GCERLG
Trigger: ACCCAGACGTTCACATCCGCAGCCAGCTGGCAGCCA...AATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp CTCCTGGGTGGGTCAGGGGTGCAGGTAGATTGCAGAGGATCTGGGATTTGGGGATGTGTTTCCCATGGGTaGGCTGGGAGGAGGGTGATC +
Preference number: 4 (lower is better)
Translates to: LLGGSGVQVDCRGSGIWGCVSHG*AGRRVI
Trigger: GATCACCCTCCTCCCAGCGCACCCATGGGAAACACA...TCCCCAAATCCCAGATCCTCTGCAATCTACCTGCACCCCTGACCCACCCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTGGCCCAGGGCACATCTaGTACCTGCCTTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: GPGHICYLPSPGEESGSFGPGHI*YLPSPG
Trigger: TCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCC...AAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AGACCTAGGCTTCCCAACTCCCGGTCCAACTCCTGGGTGGGTCAGGGGTGCAGGGCGGATGTGAACGTCTaGGTAGTGGGTAAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: RPRLPNSRSNSWVGQGCRADVNV*VVGKVE
Trigger: TTCCACTTTACCCACTACCCAGACGTTCACATCCGC...CCTGCACCCCTGACCCACCCAGGAGTTGGACCGGGAGTTGGGAAGCCTAGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp CCAACTGGCATGTTCAGGGTAGCTTCCTGGGCTGTGGGCCATTTTTGGATTGTGGCCTGCGCAGAGCAGTaGATGTCCACGTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PTGMFRVASWAVGHFWIVACAEQ*MSTWAQ
Trigger: CTGGGCCCACGTGGACATCCACTGCTCTGCGCAGGC...CACAATCCAAAAATGGCCCACAGCCCAGGAAGCTACCCTGAACATGCCAGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AGGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTATGGACAACAGCTCGTaGGAGGAGCCAGCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: RPRAHLLPAFTWRGKWLIMDNSS*EEPACA
Trigger: TGCGCAGGCTGGCTCCTCCCACGAGCTGTTGTCCAT...AATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAGAGGCTGTGTTTCCCATaGGTGCGCTGGGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: GAGPVLHLQGQESETSVQRLCFP*VRWEEG
Trigger: ACCCTCCTCCCAGCGCACCCATGGGAAACACAGCCT...CTGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AGACCTAGGCTTCCCAACTCCCGGTCCAACTCCTGGGTGGGTCAGGGGTGCAGGCTACCTGCCTTCACCTaGAGAGGAAAGTGGCTCATT +
Preference number: 4 (lower is better)
Translates to: RPRLPNSRSNSWVGQGCRLPAFT*RGKWLI
Trigger: AATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAG...CCTGCACCCCTGACCCACCCAGGAGTTGGACCGGGAGTTGGGAAGCCTAGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GGGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAGGTCCAACTCCTGGGTaGGTCAGGGGTGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: GSRPCPPPARTRIRDICAGPTPG*VRGAGR
Trigger: TCTACCTGCACCCCTGACCCACCCAGGAGTTGGACC...TGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp CCAACTGGCATGTTCAGGGTAGCTTCCTGGGCTGTGGGCCATTTTTGGATTGTGGGGGTCCCTGGGTGCTaGCAGGCCTGTCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PTGMFRVASWAVGHFWIVGVPGC*QACLFS
Trigger: AGAGAAGAGACAGGCCTGGCAGCACCCAGGGACCCC...CACAATCCAAAAATGGCCCACAGCCCAGGAAGCTACCCTGAACATGCCAGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTGGGGAGAGTAGGCCAAGGAGGGTaGCAGTGGAGAGTGGCGTAC +
Preference number: 4 (lower is better)
Translates to: GTSATCLHLERKVAHLGRVGQGG*QWRVAY
Trigger: GTACGCCACTCTCCACTGGCACCCTCCTTGGCCTAC...TCTCCCCAAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GGGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAGTGGAGCCCCCAGGTTaGCAATCTTCTCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GSRPCPPPARTRIRDICAVEPPG*QSSPAS
Trigger: GGAAGCAGGAGAAGATTGGCAACCTGGGGGCTCCAC...TGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTACCCTTGGCCTCAGGTaGCCAATTCAGTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GPGHICYLPSPGEESGSFTLGLR*PIQSWA
Trigger: AGCCCAGGACTGAATTGGCCACCTGAGGCCAAGGGT...AAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS-3UTR CCA 90 bp GGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTGGGGAGACTGCACCCGAGCTTCTaGGAGGTTGATCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GTSATCLHLERKVAHLGRLHPSF*EVDPGC
Trigger: GCAGCCAGGATCAACCTCCCAGAAGCTCGGGTGCAG...TCTCCCCAAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AATCAGAGACATCTGTGCAGAAGGGATGCTCAGCGGATGACCTCCCTGAGAACATCCCGGTCCAACTCCTaGGTGGGTCAGGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: NQRHLCRRDAQRMTSLRTSRSNS*VGQGCR
Trigger: CCTGCACCCCTGACCCACCCAGGAGTTGGACCGGGA...TGTTCTCAGGGAGGTCATCCGCTGAGCATCCCTTCTGCACAGATGTCTCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp ACAGGAACTACTCATCCTGGGCTGGCATCCAAAGCAGCCACTTTTGCAGTGGAATCCCGGTCCAACTCCTaGGTGGGTCAGGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TGTTHPGLASKAATFAVESRSNS*VGQGCR
Trigger: CCTGCACCCCTGACCCACCCAGGAGTTGGACCGGGA...TTCCACTGCAAAAGTGGCTGCTTTGGATGCCAGCCCAGGATGAGTAGTTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp GGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAGGCTGAGCTGTGGGTCTaGTTCTTCTCAGGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: GAGPVLHLQGQESETSVQAELWV*FFSGAS
Trigger: AGAGGCACCTGAGAAGAATCAGACCCACAGCTCAGC...CTGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AATCAGAGACATCTGTGCAGAAGGGATGCTCAGCGGATGACCTCCCTGAGAACAGGGGTCCCTGGGTGCTaGCAGGCCTGTCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: NQRHLCRRDAQRMTSLRTGVPGC*QACLFS
Trigger: AGAGAAGAGACAGGCCTGGCAGCACCCAGGGACCCC...TGTTCTCAGGGAGGTCATCCGCTGAGCATCCCTTCTGCACAGATGTCTCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GGGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAAGTCCTGGGCTTTACTaGAGCTTGAGGGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GSRPCPPPARTRIRDICASPGLY*SLRGLP
Trigger: GGGAAGACCCCTCAAGCTGCAGTAAAGCCCAGGACT...TGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS-3UTR GCA 90 bp CTCCTGGGTGGGTCAGGGGTGCAGGTAGATTGCAGAGGATCTGGGATTTGGGGAGGGGTGCAGGTAGATTaGAGAGGATCTGGGATTTGG +
Preference number: 4 (lower is better)
Translates to: LLGGSGVQVDCRGSGIWGGVQVD*RGSGIW
Trigger: CCAAATCCCAGATCCTCTGCAATCTACCTGCACCCC...TCCCCAAATCCCAGATCCTCTGCAATCTACCTGCACCCCTGACCCACCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AGACCTAGGCTTCCCAACTCCCGGTCCAACTCCTGGGTGGGTCAGGGGTGCAGGCCTAAAATGGGTACCTaGTACCCAAGTGATGAGCTA +
Preference number: 4 (lower is better)
Translates to: RPRLPNSRSNSWVGQGCRPKMGT*YPSDEL
Trigger: TAGCTCATCACTTGGGTAGCAGGTACCCATTTTAGG...CCTGCACCCCTGACCCACCCAGGAGTTGGACCGGGAGTTGGGAAGCCTAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GGGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAAAGAGCTGGAAGGAGTaGTATCCTGTGCCCACGGCT +
Preference number: 4 (lower is better)
Translates to: GSRPCPPPARTRIRDICAKSWKE*YPVPTA
Trigger: AGCCGTGGGCACAGGATACCACTCCTTCCAGCTCTT...TGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AGGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTTCACTCAGCTGCTGTaGAGCCCCCAGGTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: RPRAHLLPAFTWRGKWLIFTQLL*SPQVAN
Trigger: ATTGGCAACCTGGGGGCTCCACAGCAGCTGAGTGAA...AATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AGGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTCCACATCCAGATTTGTaGGCAGGGCCACACTGGCTT +
Preference number: 4 (lower is better)
Translates to: RPRAHLLPAFTWRGKWLIPHPDL*AGPHWL
Trigger: AAGCCAGTGTGGCCCTGCCCACAAATCTGGATGTGG...AATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GGGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAAGATGCTGCCCCATTTaGGGTGTGGAGGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GSRPCPPPARTRIRDICARCCPI*GVEVEG
Trigger: TCCTTCCACCTCCACACCCCAAATGGGGCAGCATCT...TGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp CTCCTGGGTGGGTCAGGGGTGCAGGTAGATTGCAGAGGATCTGGGATTTGGGGAAGGAACTACTCATCCTaGGCTGGCATCCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLGGSGVQVDCRGSGIWGRNYSS*AGIQSS
Trigger: GCTGCTTTGGATGCCAGCCCAGGATGAGTAGTTCCT...TCCCCAAATCCCAGATCCTCTGCAATCTACCTGCACCCCTGACCCACCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp CTCCTGGGTGGGTCAGGGGTGCAGGTAGATTGCAGAGGATCTGGGATTTGGGGAAGGAGTCACCATGGCTaGATTGGGGTTCAATCTTCC +
Preference number: 4 (lower is better)
Translates to: LLGGSGVQVDCRGSGIWGRSHHG*IGVQSS
Trigger: GGAAGATTGAACCCCAATTCAGCCATGGTGACTCCT...TCCCCAAATCCCAGATCCTCTGCAATCTACCTGCACCCCTGACCCACCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp GGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTACAGGGATGCAAGTTTaGTGGATGGGAAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: GPGHICYLPSPGEESGSFTGMQV*WMGRPG
Trigger: CCCAGGTCTTCCCATCCATCAAACTTGCATCCCTGT...AAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp AAGTTAGAGGAAACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCGAGGTCCAGAGAGGGTaGGTGACCGGCTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KLEETQVLEDYLPISELGEVQRG*VTGWRS
Trigger: TGACCTCCAGCCGGTCACTCACCCTCTCTGGACCTC...GCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCTCTAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp TTGAATGAAAGCTCAGGCTTTCGAGGACAGAGTGAGGCTAGTCTTCCAGCTGGTGCGCATCAGTGCTCCTaGTGTCCTGCAGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LNESSGFRGQSEASLPAGAHQCS*CPAGGG
Trigger: GCCTCCACCTGCAGGACAGCAGGAGCACTGATGCGC...ACCAGCTGGAAGACTAGCCTCACTCTGTCCTCGAAAGCCTGAGCTTTCATTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp CCAACTGGCATGTTCAGGGTAGCTTCCTGGGCTGTGGGCCATTTTTGGATTGTGTTCTCTCCATACCCCTaGAGAGAGCAGGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: PTGMFRVASWAVGHFWIVFSPYP*REQGPP
Trigger: AGGTGGGCCCTGCTCTCTGCAGGGGTATGGAGAGAA...CACAATCCAAAAATGGCCCACAGCCCAGGAAGCTACCCTGAACATGCCAGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTGGGGAGATACGAACCCTCCGCTTaGTCTTCCTTCCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GTSATCLHLERKVAHLGRYEPSA*SSFLPG
Trigger: CCCAGGAAGGAAGGAAGAGCAAGCGGAGGGTTCGTA...TCTCCCCAAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AATCAGAGACATCTGTGCAGAAGGGATGCTCAGCGGATGACCTCCCTGAGAACACTGGCTTCACTCAGCTaGTGTGGAGCCCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: NQRHLCRRDAQRMTSLRTLASLS*CGAPRL
Trigger: CAACCTGGGGGCTCCACAGCAGCTGAGTGAAGCCAG...TGTTCTCAGGGAGGTCATCCGCTGAGCATCCCTTCTGCACAGATGTCTCTGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTGGGGAGATCCTCTGTGCCTCAGTaGCCACCATGGAAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: GTSATCLHLERKVAHLGRSSVPQ*PPWKRL
Trigger: AAGACGCTTCCATGGTGGGCACTGAGGCACAGAGGA...TCTCCCCAAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GGGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAGTTGAGCAAGTGTTCTaGTTTCAGAGGTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GSRPCPPPARTRIRDICAVEQVF*FQRWAS
Trigger: GCTGGCCCACCTCTGAAAGCAGAACACTTGCTCAAC...TGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GGGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAGGGGTGCAGGTAGATTaGAGAGGATCTGGGATTTGG +
Preference number: 4 (lower is better)
Translates to: GSRPCPPPARTRIRDICAGVQVD*RGSGIW
Trigger: CCAAATCCCAGATCCTCTGCAATCTACCTGCACCCC...TGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTGGGGAGATTGGAGTGCCACCCTTaGCCTCAGGTGGCCAATTCA +
Preference number: 4 (lower is better)
Translates to: GTSATCLHLERKVAHLGRLECHP*PQVANS
Trigger: TGAATTGGCCACCTGAGGCCAAGGGTGGCACTCCAA...TCTCCCCAAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS-3UTR CCA 90 bp GGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTGGGGAGAAAGAGCTGGAAGGAGTaGTATCCTGTGCCCACGGCT +
Preference number: 4 (lower is better)
Translates to: GTSATCLHLERKVAHLGRKSWKE*YPVPTA
Trigger: AGCCGTGGGCACAGGATACCACTCCTTCCAGCTCTT...TCTCCCCAAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp ACAGGAACTACTCATCCTGGGCTGGCATCCAAAGCAGCCACTTTTGCAGTGGAATGGGCAGGGCCACACTaGCTTCACTCAGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: TGTTHPGLASKAATFAVEWAGPH*LHSAAV
Trigger: CACAGCAGCTGAGTGAAGCCAGTGTGGCCCTGCCCA...TTCCACTGCAAAAGTGGCTGCTTTGGATGCCAGCCCAGGATGAGTAGTTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp AACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCCTGAGATCTCAGGCTTTACTGCAGCTTaGGGGGTCTTCCCAGACACC +
Preference number: 4 (lower is better)
Translates to: NTGAGGLPPYFRARPEISGFTAA*GVFPDT
Trigger: GGTGTCTGGGAAGACCCCTCAAGCTGCAGTAAAGCC...TGAGATCTCAGGCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS-3UTR TCA 90 bp TTCTGGCATATTGCATGCCTGAAGGCAGAGCTAGCACTGCTACCTCCAATACAGGCAGCTGCTCAGTGGTaGAGGTGGTACGAACCCTCC +
Preference number: 4 (lower is better)
Translates to: FWHIACLKAELALLPPIQAAAQW*RWYEPS
Trigger: GGAGGGTTCGTACCACCTTCACCACTGAGCAGCTGC...CTGTATTGGAGGTAGCAGTGCTAGCTCTGCCTTCAGGCATGCAATATGCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp GTGGGCCAGCACCACCTTTTGACAAACGTGGACAGAACCCAAATTGTTTATCTCGAGCTTCTGGGAGGTTaGTCCTGGCTGCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: VGQHHLLTNVDRTQIVYLELLGG*SWLPAG
Trigger: GCCAGCTGGCAGCCAGGATCAACCTCCCAGAAGCTC...GAGATAAACAATTTGGGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AATCAGAGACATCTGTGCAGAAGGGATGCTCAGCGGATGACCTCCCTGAGAACACCTTCAGCGCATCAGTaGTCCTGCTGTCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: NQRHLCRRDAQRMTSLRTPSAHQ*SCCPAG
Trigger: ACCTGCAGGACAGCAGGAGCACTGATGCGCTGAAGG...TGTTCTCAGGGAGGTCATCCGCTGAGCATCCCTTCTGCACAGATGTCTCTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp ACAGGAACTACTCATCCTGGGCTGGCATCCAAAGCAGCCACTTTTGCAGTGGAACCTTCAGCGCATCAGTaGTCCTGCTGTCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TGTTHPGLASKAATFAVEPSAHQ*SCCPAG
Trigger: ACCTGCAGGACAGCAGGAGCACTGATGCGCTGAAGG...TTCCACTGCAAAAGTGGCTGCTTTGGATGCCAGCCCAGGATGAGTAGTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp CCAACTGGCATGTTCAGGGTAGCTTCCTGGGCTGTGGGCCATTTTTGGATTGTGTTGCCAATCTTCTCCTaGTTCCGCCACTTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: PTGMFRVASWAVGHFWIVLPIFS*FRHLAR
Trigger: GCGAGCCAAGTGGCGGAAGCAGGAGAAGATTGGCAA...CACAATCCAAAAATGGCCCACAGCCCAGGAAGCTACCCTGAACATGCCAGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp ACAGGAACTACTCATCCTGGGCTGGCATCCAAAGCAGCCACTTTTGCAGTGGAATGTGTTTCCCATGGGTaGGCTGGGAGGAGGGTGATC +
Preference number: 4 (lower is better)
Translates to: TGTTHPGLASKAATFAVECVSHG*AGRRVI
Trigger: GATCACCCTCCTCCCAGCGCACCCATGGGAAACACA...TTCCACTGCAAAAGTGGCTGCTTTGGATGCCAGCCCAGGATGAGTAGTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp TTGAATGAAAGCTCAGGCTTTCGAGGACAGAGTGAGGCTAGTCTTCCAGCTGGTGGCCCAGGGCACATCTaGTACCTGCCTTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: LNESSGFRGQSEASLPAGGPGHI*YLPSPG
Trigger: TCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCC...ACCAGCTGGAAGACTAGCCTCACTCTGTCCTCGAAAGCCTGAGCTTTCATTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GGGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCACCTCTCCCTTCCTTGTaGGGTCCTTTATGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GSRPCPPPARTRIRDICAPLPSL*GPLCCF
Trigger: GAAACAGCATAAAGGACCCCACAAGGAAGGGAGAGG...TGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp ACAGGAACTACTCATCCTGGGCTGGCATCCAAAGCAGCCACTTTTGCAGTGGAAGAGGTCACCGCCCAGTaGCGAACAAAGAGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: TGTTHPGLASKAATFAVEEVTAQ*RTKRRG
Trigger: CCCTCTTCTCTTTGTTCGCCACTGGGCGGTGACCTC...TTCCACTGCAAAAGTGGCTGCTTTGGATGCCAGCCCAGGATGAGTAGTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS-3UTR CCA 90 bp AGGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTTAGGATCGCCTCAATaGAGAAGGACAGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RPRAHLLPAFTWRGKWLILGSPQ*RRTGSA
Trigger: AGCTGAGCCTGTCCTTCTCCATTGAGGCGATCCTAA...AATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTGGGGAGATTCAGGGTAGCTTCCTaGGCTGTGGGCCATTTTTGG +
Preference number: 4 (lower is better)
Translates to: GTSATCLHLERKVAHLGRFRVAS*AVGHFW
Trigger: CCAAAAATGGCCCACAGCCCAGGAAGCTACCCTGAA...TCTCCCCAAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp TCCTACTTTTCATTTGTGCCAGAAATGACAACATCCCTTTCCCATCCAGCAAGACCTGCAGGTGGAGGCTaGGGAAAGGGGGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SYFSFVPEMTTSLSHPARPAGGG*GKGVPG
Trigger: CCCAGGGACCCCCTTTCCTCAGCCTCCACCTGCAGG...TCTTGCTGGATGGGAAAGGGATGTTGTCATTTCTGGCACAAATGAAAAGTAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp GGGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAGAGCCTCCAGTTAGATaGTCCAAACAGGATTTCGTG +
Preference number: 4 (lower is better)
Translates to: GSRPCPPPARTRIRDICAEPPVR*SKQDFV
Trigger: CACGAAATCCTGTTTGGATCATCTAACTGGAGGCTC...TGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp GGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAGGAGCCTCCAGTTAGATaGTCCAAACAGGATTTCGTG +
Preference number: 4 (lower is better)
Translates to: GAGPVLHLQGQESETSVQEPPVR*SKQDFV
Trigger: CACGAAATCCTGTTTGGATCATCTAACTGGAGGCTC...CTGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp TTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGTCTGTAGTTCTGGCGAGGTCCAGAGAGGGTaGGTGACCGGCTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: FKMAKHFCILWAVVCSSGEVQRG*VTGWRS
Trigger: TGACCTCCAGCCGGTCACTCACCCTCTCTGGACCTC...GCCAGAACTACAGACAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp AAGTTAGAGGAAACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCCCTCTCAGAGCCTCCTaGATGCTCTTTGAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: KLEETQVLEDYLPISELGPLRAS*MLFEAG
Trigger: GCCTGCCTCAAAGAGCATTCAGGAGGCTCTGAGAGG...GCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCTCTAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp ATCTCTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGAAGGGGGTCCCTGGGTaGTGCCAGGCCTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ISVSRSVYGVLSRYSCVTKGVPG*CQACLF
Trigger: GAAGAGACAGGCCTGGCAGCACCCAGGGACCCCCTT...CGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GGGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCATTCCTTCAGTTCTGCTaGTTCCAGACTCCAGAACGT +
Preference number: 4 (lower is better)
Translates to: GSRPCPPPARTRIRDICAFLQFC*FQTPER
Trigger: ACGTTCTGGAGTCTGGAAGCAGCAGAACTGAAGGAA...TGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS-3UTR GCA 90 bp AGCCTTCTCCTTTCATCCAGCGGTGCTAGAGACCTGGTGTTGATATCCACATTCAGGAGTGGTATCCTGTaGCCACGGCTCAGCCCTTAC +
Preference number: 4 (lower is better)
Translates to: SLLLSSSGARDLVLISTFRSGIL*PRLSPY
Trigger: GTAAGGGCTGAGCCGTGGGCACAGGATACCACTCCT...GAATGTGGATATCAACACCAGGTCTCTAGCACCGCTGGATGAAAGGAGAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AGCCTTCTCCTTTCATCCAGCGGTGCTAGAGACCTGGTGTTGATATCCACATTCGTGGAGCCCCCAGGTTaGCAATCTTCTCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLLLSSSGARDLVLISTFVEPPG*QSSPAS
Trigger: GGAAGCAGGAGAAGATTGGCAACCTGGGGGCTCCAC...GAATGTGGATATCAACACCAGGTCTCTAGCACCGCTGGATGAAAGGAGAAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCCTGAGATCTCATCCTCTGTGCCTCAGTaGCCACCATGGAAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: NTGAGGLPPYFRARPEISSSVPQ*PPWKRL
Trigger: AAGACGCTTCCATGGTGGGCACTGAGGCACAGAGGA...TGAGATCTCAGGCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTTTCTGGCATATTGCATaGCTGAAGGCAGAGCTAGCA +
Preference number: 4 (lower is better)
Translates to: GPGHICYLPSPGEESGSFFWHIA*LKAELA
Trigger: TGCTAGCTCTGCCTTCAGGCATGCAATATGCCAGAA...AAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTGTAGTTCTGGCATATTaGATGCCTGAAGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: GPGHICYLPSPGEESGSFVVLAY*MPEGRA
Trigger: AGCTCTGCCTTCAGGCATGCAATATGCCAGAACTAC...AAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GTGGGCCAGCACCACCTTTTGACAAACGTGGACAGAACCCAAATTGTTTATCTCCTGCTGTCCTGCAGGTaGAGGCTGAGGAAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: VGQHHLLTNVDRTQIVYLLLSCR*RLRKGG
Trigger: ACCCCCTTTCCTCAGCCTCCACCTGCAGGACAGCAG...GAGATAAACAATTTGGGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp ACAGGAACTACTCATCCTGGGCTGGCATCCAAAGCAGCCACTTTTGCAGTGGAATCTCCAGAGGAGGTTTaGAGGCAGGGGTCCACCTTT +
Preference number: 4 (lower is better)
Translates to: TGTTHPGLASKAATFAVESPEEV*RQGSTF
Trigger: AAAGGTGGACCCCTGCCTCCAAACCTCCTCTGGAGA...TTCCACTGCAAAAGTGGCTGCTTTGGATGCCAGCCCAGGATGAGTAGTTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS-3UTR CCA 90 bp GGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTGGGGAGATTAGGATCGCCTCAATaGAGAAGGACAGGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GTSATCLHLERKVAHLGRLGSPQ*RRTGSA
Trigger: AGCTGAGCCTGTCCTTCTCCATTGAGGCGATCCTAA...TCTCCCCAAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GTGGGCCAGCACCACCTTTTGACAAACGTGGACAGAACCCAAATTGTTTATCTCGGGGCCCTCTTCACCTaGCCCTTCTGGTCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: VGQHHLLTNVDRTQIVYLGALFT*PFWSVH
Trigger: ATGGACAGACCAGAAGGGCCAGGTGAAGAGGGCCCC...GAGATAAACAATTTGGGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp CTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGGATGTGGGCAGGGCCACACTaGCTTCACTCAGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LYPVLFMESSVGTHVSRMWAGPH*LHSAAV
Trigger: CACAGCAGCTGAGTGAAGCCAGTGTGGCCCTGCCCA...CATCCGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TTCTGGCATATTGCATGCCTGAAGGCAGAGCTAGCACTGCTACCTCCAATACAGCAGTGGATGTCCACGTaGGCCCAGCCACATCCAGAT +
Preference number: 4 (lower is better)
Translates to: FWHIACLKAELALLPPIQQWMST*AQPHPD
Trigger: ATCTGGATGTGGCTGGGCCCACGTGGACATCCACTG...CTGTATTGGAGGTAGCAGTGCTAGCTCTGCCTTCAGGCATGCAATATGCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAGGGAAAGTGGCTCATTTaGGGAGAGCATGTCCAATCT +
Preference number: 4 (lower is better)
Translates to: GAGPVLHLQGQESETSVQGKWLI*GEHVQS
Trigger: AGATTGGACATGCTCTCCCCAAATGAGCCACTTTCC...CTGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp GGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTGGGGAGACAGCCCTTACCAGTTTaGCATCAAAGGAGTCACCAT +
Preference number: 4 (lower is better)
Translates to: GTSATCLHLERKVAHLGRQPLPV*HQRSHH
Trigger: ATGGTGACTCCTTTGATGTCAAACTGGTAAGGGCTG...TCTCCCCAAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp TTGAATGAAAGCTCAGGCTTTCGAGGACAGAGTGAGGCTAGTCTTCCAGCTGGTTTTCAGAGCTCGGCCTaGGATCTCATCCAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LNESSGFRGQSEASLPAGFQSSA*DLIQPV
Trigger: GACAGGCTGGATGAGATCTCAGGCCGAGCTCTGAAA...ACCAGCTGGAAGACTAGCCTCACTCTGTCCTCGAAAGCCTGAGCTTTCATTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp AAGTTAGAGGAAACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCGCCAGCACCACCTTTTaGCAAACGTGGACAGAACCC +
Preference number: 4 (lower is better)
Translates to: KLEETQVLEDYLPISELGASTTF*QTWTEP
Trigger: GGGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGC...GCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCTCTAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp GGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTCAACAGCAAGGTTGTTaGGCAAGTGTTCTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: GPGHICYLPSPGEESGSFQQQGC*ASVLLS
Trigger: TGAAAGCAGAACACTTGCTCAACAACCTTGCTGTTG...AAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp GGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAGCATTTGTGCCAGAAATaGCAACATCCCTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: GAGPVLHLQGQESETSVQHLCQK*QHPFPI
Trigger: GATGGGAAAGGGATGTTGTCATTTCTGGCACAAATG...CTGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp GGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTCATTTGTGCCAGAAATaGCAACATCCCTTTCCCATC +
Preference number: 4 (lower is better)
Translates to: GPGHICYLPSPGEESGSFHLCQK*QHPFPI
Trigger: GATGGGAAAGGGATGTTGTCATTTCTGGCACAAATG...AAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp TGGGTACCTGCTACCCAAGTGATGAGCTACTGCCTTTGTTTGTTAACTGCTCTTCCTGTCTCTTCTCTGTaGCAGGGCTGGGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: WVPATQVMSYCLCLLTALPVSSL*QGWAEL
Trigger: CAGCTCAGCCCAGCCCTGGCACAGAGAAGAGACAGG...AAGAGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTGGGTAGCAGGTACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp ATCTCTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGGTAGGCCAAGGAGGGTaGCAGTGGAGAGTGGCGTAC +
Preference number: 4 (lower is better)
Translates to: ISVSRSVYGVLSRYSCVTVGQGG*QWRVAY
Trigger: GTACGCCACTCTCCACTGGCACCCTCCTTGGCCTAC...CGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp ATCTCTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGTGGCTGCCAGCTGGCTaGGGATGTGAACGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: ISVSRSVYGVLSRYSCVTWLPAG*GCERLG
Trigger: ACCCAGACGTTCACATCCGCAGCCAGCTGGCAGCCA...CGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp TTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGTCTGTAGTTCTGGCCTGGCTTCACTCAGCTaGTGTGGAGCCCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: FKMAKHFCILWAVVCSSGLASLS*CGAPRL
Trigger: CAACCTGGGGGCTCCACAGCAGCTGAGTGAAGCCAG...GCCAGAACTACAGACAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp ACAGGAACTACTCATCCTGGGCTGGCATCCAAAGCAGCCACTTTTGCAGTGGAAGTGGAGGTGGAAGGATaGATAGCACAGGGATGCAAG +
Preference number: 4 (lower is better)
Translates to: TGTTHPGLASKAATFAVEVEVEG*IAQGCK
Trigger: CTTGCATCCCTGTGCTATGCATCCTTCCACCTCCAC...TTCCACTGCAAAAGTGGCTGCTTTGGATGCCAGCCCAGGATGAGTAGTTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp CCAACTGGCATGTTCAGGGTAGCTTCCTGGGCTGTGGGCCATTTTTGGATTGTGCTCCACACTGGGCCTTaGCCTCACTTTGCAAAATAC +
Preference number: 4 (lower is better)
Translates to: PTGMFRVASWAVGHFWIVLHTGP*PHFAKY
Trigger: GTATTTTGCAAAGTGAGGGCAAGGCCCAGTGTGGAG...CACAATCCAAAAATGGCCCACAGCCCAGGAAGCTACCCTGAACATGCCAGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp TTCTGGCATATTGCATGCCTGAAGGCAGAGCTAGCACTGCTACCTCCAATACAGTCTGTGCAGAAGGGATaGTCAGCGGATGACCTCCCT +
Preference number: 4 (lower is better)
Translates to: FWHIACLKAELALLPPIQSVQKG*SADDLP
Trigger: AGGGAGGTCATCCGCTGAGCATCCCTTCTGCACAGA...CTGTATTGGAGGTAGCAGTGCTAGCTCTGCCTTCAGGCATGCAATATGCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AGGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTGGAATTTAGGCTTGTaGAAGAGGTCATTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RPRAHLLPAFTWRGKWLIWNLGL*KRSFQA
Trigger: AGCCTGGAATGACCTCTTGCACAAGCCTAAATTCCA...AATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp CTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGGATGCCTTTAGGAGGAGGTTaGAGTGCCACCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LYPVLFMESSVGTHVSRMPLGGG*SATLGL
Trigger: GAGGCCAAGGGTGGCACTCCAACCTCCTCCTAAAGG...CATCCGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS-3UTR CCA 90 bp CCAACTGGCATGTTCAGGGTAGCTTCCTGGGCTGTGGGCCATTTTTGGATTGTGTCACAGCAGAAGAGCTaGAAGGAGTGGTATCCTGTG +
Preference number: 4 (lower is better)
Translates to: PTGMFRVASWAVGHFWIVSQQKS*KEWYPV
Trigger: CACAGGATACCACTCCTTCCAGCTCTTCTGCTGTGA...CACAATCCAAAAATGGCCCACAGCCCAGGAAGCTACCCTGAACATGCCAGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AAGTTAGAGGAAACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCCCACAGGGACTTCCATaGGCAGGTCACAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: KLEETQVLEDYLPISELGPQGLP*AGHSRR
Trigger: TCTTCTGCTGTGACCTGCCCATGGAAGTCCCTGTGG...GCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCTCTAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp CTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGGATGGGTGCCAGTGGAGAGTaGCGTACTTCCTCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LYPVLFMESSVGTHVSRMGASGE*RTSSPE
Trigger: TTCAGGGGAGGAAGTACGCCACTCTCCACTGGCACC...CATCCGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AGCCTTCTCCTTTCATCCAGCGGTGCTAGAGACCTGGTGTTGATATCCACATTCTTCACTCAGCTGCTGTaGAGCCCCCAGGTTGCCAAT +
Preference number: 4 (lower is better)
Translates to: SLLLSSSGARDLVLISTFFTQLL*SPQVAN
Trigger: ATTGGCAACCTGGGGGCTCCACAGCAGCTGAGTGAA...GAATGTGGATATCAACACCAGGTCTCTAGCACCGCTGGATGAAAGGAGAAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TCCTACTTTTCATTTGTGCCAGAAATGACAACATCCCTTTCCCATCCAGCAAGAGCCTGCGCAGAGCAGTaGATGTCCACGTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SYFSFVPEMTTSLSHPARACAEQ*MSTWAQ
Trigger: CTGGGCCCACGTGGACATCCACTGCTCTGCGCAGGC...TCTTGCTGGATGGGAAAGGGATGTTGTCATTTCTGGCACAAATGAAAAGTAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp ATCTCTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGATGGACAACAGCTCGTaGGAGGAGCCAGCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: ISVSRSVYGVLSRYSCVTMDNSS*EEPACA
Trigger: TGCGCAGGCTGGCTCCTCCCACGAGCTGTTGTCCAT...CGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AAGTTAGAGGAAACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCCTGATCTTGAGCCGATaGACAACAGCTCGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KLEETQVLEDYLPISELGLILSR*TTARGR
Trigger: CCTCCCACGAGCTGTTGTCCATCGGCTCAAGATCAG...GCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCTCTAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TTCTGGCATATTGCATGCCTGAAGGCAGAGCTAGCACTGCTACCTCCAATACAGAGATGCTGCCCCATTTaGGGTGTGGAGGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: FWHIACLKAELALLPPIQRCCPI*GVEVEG
Trigger: TCCTTCCACCTCCACACCCCAAATGGGGCAGCATCT...CTGTATTGGAGGTAGCAGTGCTAGCTCTGCCTTCAGGCATGCAATATGCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTTCTTTGAGGCAGGCCTaGCTACCTTCATTTTATGGA +
Preference number: 4 (lower is better)
Translates to: GPGHICYLPSPGEESGSFSLRQA*LPSFYG
Trigger: TCCATAAAATGAAGGTAGCCAGGCCTGCCTCAAAGA...AAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp GTGGGCCAGCACCACCTTTTGACAAACGTGGACAGAACCCAAATTGTTTATCTCTTTCAGAGCTCGGCCTaGGATCTCATCCAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: VGQHHLLTNVDRTQIVYLFQSSA*DLIQPV
Trigger: GACAGGCTGGATGAGATCTCAGGCCGAGCTCTGAAA...GAGATAAACAATTTGGGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AATCAGAGACATCTGTGCAGAAGGGATGCTCAGCGGATGACCTCCCTGAGAACACTTCTCGGACACAGTTaGCTGCACAATCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: NQRHLCRRDAQRMTSLRTLLGHS*LHNHQV
Trigger: AACCTGGTGATTGTGCAGGCAACTGTGTCCGAGAAG...TGTTCTCAGGGAGGTCATCCGCTGAGCATCCCTTCTGCACAGATGTCTCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AAGTTAGAGGAAACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCGTTGAGCAAGTGTTCTaGTTTCAGAGGTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KLEETQVLEDYLPISELGVEQVF*FQRWAS
Trigger: GCTGGCCCACCTCTGAAAGCAGAACACTTGCTCAAC...GCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCTCTAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GTGGGCCAGCACCACCTTTTGACAAACGTGGACAGAACCCAAATTGTTTATCTCTCTGTGCAGAAGGGATaGTCAGCGGATGACCTCCCT +
Preference number: 4 (lower is better)
Translates to: VGQHHLLTNVDRTQIVYLSVQKG*SADDLP
Trigger: AGGGAGGTCATCCGCTGAGCATCCCTTCTGCACAGA...GAGATAAACAATTTGGGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp CTCCTGGGTGGGTCAGGGGTGCAGGTAGATTGCAGAGGATCTGGGATTTGGGGACAAGTGATGAGCTACTaGCTTTGTTTGTTAACTGCT +
Preference number: 4 (lower is better)
Translates to: LLGGSGVQVDCRGSGIWGQVMSY*LCLLTA
Trigger: AGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTG...TCCCCAAATCCCAGATCCTCTGCAATCTACCTGCACCCCTGACCCACCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTGGGGAGATCAAAGGAGTCACCATaGCTGAATTGGGGTTCAATC +
Preference number: 4 (lower is better)
Translates to: GTSATCLHLERKVAHLGRSKESP*LNWGSI
Trigger: GATTGAACCCCAATTCAGCCATGGTGACTCCTTTGA...TCTCCCCAAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TGGGTACCTGCTACCCAAGTGATGAGCTACTGCCTTTGTTTGTTAACTGCTCTTGGTGCCAGTGGAGAGTaGCGTACTTCCTCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: WVPATQVMSYCLCLLTALGASGE*RTSSPE
Trigger: TTCAGGGGAGGAAGTACGCCACTCTCCACTGGCACC...AAGAGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTGGGTAGCAGGTACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp ATCTCTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGCAAGGAGGGTGCCAGTaGAGAGTGGCGTACTTCCTC +
Preference number: 4 (lower is better)
Translates to: ISVSRSVYGVLSRYSCVTQGGCQ*RVAYFL
Trigger: GAGGAAGTACGCCACTCTCCACTGGCACCCTCCTTG...CGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TTCTGGCATATTGCATGCCTGAAGGCAGAGCTAGCACTGCTACCTCCAATACAGCCATATCACTCCTCCTaGCAGGCCTCTTTAGGATCG +
Preference number: 4 (lower is better)
Translates to: FWHIACLKAELALLPPIQPYHSS*QASLGS
Trigger: CGATCCTAAAGAGGCCTGCCAGGAGGAGTGATATGG...CTGTATTGGAGGTAGCAGTGCTAGCTCTGCCTTCAGGCATGCAATATGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCCTGAGATCTCATTCACCTGGCCCTTCTaGTCTGTCCATATCACTCCT +
Preference number: 4 (lower is better)
Translates to: NTGAGGLPPYFRARPEISFTWPF*SVHITP
Trigger: AGGAGTGATATGGACAGACCAGAAGGGCCAGGTGAA...TGAGATCTCAGGCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AGTGATCTGGCATTTTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGGGGGCCCTCTTCACCTaGCCCTTCTGGTCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: SDLAFLRWQSTFASCGLLGALFT*PFWSVH
Trigger: ATGGACAGACCAGAAGGGCCAGGTGAAGAGGGCCCC...CAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAGATCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AAGTTAGAGGAAACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCCTTCCTTCCTGGGGCTaGTCCTTTGGAGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: KLEETQVLEDYLPISELGLPSWG*SFGGFS
Trigger: AGAAAAGCCTCCAAAGGACCAGCCCCAGGAAGGAAG...GCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCTCTAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TCCTACTTTTCATTTGTGCCAGAAATGACAACATCCCTTTCCCATCCAGCAAGATTCCCATGGGTGCGCTaGGAGGAGGGTGATCCAGGC +
Preference number: 4 (lower is better)
Translates to: SYFSFVPEMTTSLSHPARFPWVR*EEGDPG
Trigger: GCCTGGATCACCCTCCTCCCAGCGCACCCATGGGAA...TCTTGCTGGATGGGAAAGGGATGTTGTCATTTCTGGCACAAATGAAAAGTAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCCTGAGATCTCAACCTGGAGAGGAAAGTaGCTCATTTGGGGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: NTGAGGLPPYFRARPEISTWRGK*LIWGEH
Trigger: ATGCTCTCCCCAAATGAGCCACTTTCCTCTCCAGGT...TGAGATCTCAGGCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AAGTTAGAGGAAACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCTTCAGGGTAGCTTCCTaGGCTGTGGGCCATTTTTGG +
Preference number: 4 (lower is better)
Translates to: KLEETQVLEDYLPISELGFRVAS*AVGHFW
Trigger: CCAAAAATGGCCCACAGCCCAGGAAGCTACCCTGAA...GCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCTCTAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AAGTTAGAGGAAACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCGTGCAGCCTTCCAACTaGCATGTTCAGGGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: KLEETQVLEDYLPISELGVQPSN*HVQGSF
Trigger: GAAGCTACCCTGAACATGCCAGTTGGAAGGCTGCAC...GCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCTCTAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AAGTTAGAGGAAACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCAGGAACTACTCATCCTaGGCTGGCATCCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: KLEETQVLEDYLPISELGRNYSS*AGIQSS
Trigger: GCTGCTTTGGATGCCAGCCCAGGATGAGTAGTTCCT...GCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCTCTAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTTTTGGGGAAGATTCCTaGAATTTAGGCTTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: GPGHICYLPSPGEESGSFFGEDS*NLGLCK
Trigger: CTTGCACAAGCCTAAATTCCAGGAATCTTCCCCAAA...AAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTAGAGGATCTGGGATTTaGGGAAGATTCCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: GPGHICYLPSPGEESGSFRGSGI*GRFLEF
Trigger: AAATTCCAGGAATCTTCCCCAAATCCCAGATCCTCT...AAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp TGGGTACCTGCTACCCAAGTGATGAGCTACTGCCTTTGTTTGTTAACTGCTCTTGCTGAGCTGTGGGTCTaGTTCTTCTCAGGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: WVPATQVMSYCLCLLTALAELWV*FFSGAS
Trigger: AGAGGCACCTGAGAAGAATCAGACCCACAGCTCAGC...AAGAGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTGGGTAGCAGGTACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp GTGGGCCAGCACCACCTTTTGACAAACGTGGACAGAACCCAAATTGTTTATCTCACAGGGATGCAAGTTTaGTGGATGGGAAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: VGQHHLLTNVDRTQIVYLTGMQV*WMGRPG
Trigger: CCCAGGTCTTCCCATCCATCAAACTTGCATCCCTGT...GAGATAAACAATTTGGGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp TGGGTACCTGCTACCCAAGTGATGAGCTACTGCCTTTGTTTGTTAACTGCTCTTTACGAACCCTCCGCTTaGTCTTCCTTCCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: WVPATQVMSYCLCLLTALYEPSA*SSFLPG
Trigger: CCCAGGAAGGAAGGAAGAGCAAGCGGAGGGTTCGTA...AAGAGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTGGGTAGCAGGTACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp TCCTACTTTTCATTTGTGCCAGAAATGACAACATCCCTTTCCCATCCAGCAAGAGAGGTTGATCCTGGCTaGCAGCTGGCTGCGGATGTG +
Preference number: 4 (lower is better)
Translates to: SYFSFVPEMTTSLSHPAREVDPG*QLAADV
Trigger: CACATCCGCAGCCAGCTGGCAGCCAGGATCAACCTC...TCTTGCTGGATGGGAAAGGGATGTTGTCATTTCTGGCACAAATGAAAAGTAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp TTGAATGAAAGCTCAGGCTTTCGAGGACAGAGTGAGGCTAGTCTTCCAGCTGGTAATCAGAGACATCTGTaGAGAAGGGATGCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: LNESSGFRGQSEASLPAGNQRHL*RRDAQR
Trigger: CCGCTGAGCATCCCTTCTGCACAGATGTCTCTGATT...ACCAGCTGGAAGACTAGCCTCACTCTGTCCTCGAAAGCCTGAGCTTTCATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCCTGAGATCTCATTCTGGCATATTGCATaGCTGAAGGCAGAGCTAGCA +
Preference number: 4 (lower is better)
Translates to: NTGAGGLPPYFRARPEISFWHIA*LKAELA
Trigger: TGCTAGCTCTGCCTTCAGGCATGCAATATGCCAGAA...TGAGATCTCAGGCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AAGTTAGAGGAAACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCCCTCTCCCTTCCTTGTaGGGTCCTTTATGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: KLEETQVLEDYLPISELGPLPSL*GPLCCF
Trigger: GAAACAGCATAAAGGACCCCACAAGGAAGGGAGAGG...GCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCTCTAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AGCCTTCTCCTTTCATCCAGCGGTGCTAGAGACCTGGTGTTGATATCCACATTCTGGCCAATTCAGTCCTaGGCTTTACTGCAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: SLLLSSSGARDLVLISTFWPIQS*ALLQLE
Trigger: CTCAAGCTGCAGTAAAGCCCAGGACTGAATTGGCCA...GAATGTGGATATCAACACCAGGTCTCTAGCACCGCTGGATGAAAGGAGAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS-3UTR CCA 90 bp GTGGGCCAGCACCACCTTTTGACAAACGTGGACAGAACCCAAATTGTTTATCTCCCATATCACTCCTCCTaGCAGGCCTCTTTAGGATCG +
Preference number: 4 (lower is better)
Translates to: VGQHHLLTNVDRTQIVYLPYHSS*QASLGS
Trigger: CGATCCTAAAGAGGCCTGCCAGGAGGAGTGATATGG...GAGATAAACAATTTGGGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AAGTTAGAGGAAACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCTTCACCTGGCCCTTCTaGTCTGTCCATATCACTCCT +
Preference number: 4 (lower is better)
Translates to: KLEETQVLEDYLPISELGFTWPF*SVHITP
Trigger: AGGAGTGATATGGACAGACCAGAAGGGCCAGGTGAA...GCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCTCTAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp CTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGGATGCTTCCTTCCTGGGGCTaGTCCTTTGGAGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LYPVLFMESSVGTHVSRMLPSWG*SFGGFS
Trigger: AGAAAAGCCTCCAAAGGACCAGCCCCAGGAAGGAAG...CATCCGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TCCTACTTTTCATTTGTGCCAGAAATGACAACATCCCTTTCCCATCCAGCAAGACTGCACCCGAGCTTCTaGGAGGTTGATCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SYFSFVPEMTTSLSHPARLHPSF*EVDPGC
Trigger: GCAGCCAGGATCAACCTCCCAGAAGCTCGGGTGCAG...TCTTGCTGGATGGGAAAGGGATGTTGTCATTTCTGGCACAAATGAAAAGTAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TTGAATGAAAGCTCAGGCTTTCGAGGACAGAGTGAGGCTAGTCTTCCAGCTGGTTGCAAGTTTGATGGATaGGAAGACCTGGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: LNESSGFRGQSEASLPAGCKFDG*EDLGQA
Trigger: AGCCTGTCCCAGGTCTTCCCATCCATCAAACTTGCA...ACCAGCTGGAAGACTAGCCTCACTCTGTCCTCGAAAGCCTGAGCTTTCATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TTGAATGAAAGCTCAGGCTTTCGAGGACAGAGTGAGGCTAGTCTTCCAGCTGGTACCTGGAGAGGAAAGTaGCTCATTTGGGGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: LNESSGFRGQSEASLPAGTWRGK*LIWGEH
Trigger: ATGCTCTCCCCAAATGAGCCACTTTCCTCTCCAGGT...ACCAGCTGGAAGACTAGCCTCACTCTGTCCTCGAAAGCCTGAGCTTTCATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp CTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGGATGCTACTCATCCTGGGCTaGCATCCAAAGCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: LYPVLFMESSVGTHVSRMLLILG*HPKQPL
Trigger: AAGTGGCTGCTTTGGATGCCAGCCCAGGATGAGTAG...CATCCGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR CAA 72 bp GAGGCTCAGACAGAACATGTGGTTTGCCCAGCGTCTTaGCATGGAAATAGGGAGTTGAATGAAAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: EAQTEHVVCPAS*HGNRELNESSG
Trigger: GCCTGAGCTTTCATTCAACTCCCTATTTCCATGCAAAGACGCTGGGCAAACCACATGTTCTGTCTGAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR CAA 72 bp GATCTGGGATTTGGGGAAGATTCCTGGAATTTAGGCTaGTGCAAGAGGTCATTCCAGGCTTCCCAGCTTAGG +
Preference number: 4 (lower is better)
Translates to: DLGFGEDSWNLG*CKRSFQASQLR
Trigger: CCTAAGCTGGGAAGCCTGGAATGACCTCTTGCACAAGCCTAAATTCCAGGAATCTTCCCCAAATCCCAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp AGTGATCTGGCATTTTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGGCCAGCACCACCTTTTaGCAAACGTGGACAGAACCC +
Preference number: 4 (lower is better)
Translates to: SDLAFLRWQSTFASCGLLASTTF*QTWTEP
Trigger: GGGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGC...CAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAGATCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp AACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCCTGAGATCTCACAACAGCAAGGTTGTTaGGCAAGTGTTCTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: NTGAGGLPPYFRARPEISQQQGC*ASVLLS
Trigger: TGAAAGCAGAACACTTGCTCAACAACCTTGCTGTTG...TGAGATCTCAGGCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp TGGGTACCTGCTACCCAAGTGATGAGCTACTGCCTTTGTTTGTTAACTGCTCTTTCGGACACAGTTGCCTaGACAATCACCAGGTTAGGC +
Preference number: 4 (lower is better)
Translates to: WVPATQVMSYCLCLLTALSDTVA*TITRLG
Trigger: GCCTAACCTGGTGATTGTGCAGGCAACTGTGTCCGA...AAGAGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTGGGTAGCAGGTACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GTGGGCCAGCACCACCTTTTGACAAACGTGGACAGAACCCAAATTGTTTATCTCCTTCTCGGACACAGTTaGCTGCACAATCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: VGQHHLLTNVDRTQIVYLLLGHS*LHNHQV
Trigger: AACCTGGTGATTGTGCAGGCAACTGTGTCCGAGAAG...GAGATAAACAATTTGGGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp TTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGTCTGTAGTTCTGGCGTGGAGGTGGAAGGATaGATAGCACAGGGATGCAAG +
Preference number: 4 (lower is better)
Translates to: FKMAKHFCILWAVVCSSGVEVEG*IAQGCK
Trigger: CTTGCATCCCTGTGCTATGCATCCTTCCACCTCCAC...GCCAGAACTACAGACAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp TTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGTCTGTAGTTCTGGCGGCACATCTGCTACCTaGCTTCACCTGGAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: FKMAKHFCILWAVVCSSGGTSAT*LHLERK
Trigger: TTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCC...GCCAGAACTACAGACAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp TGGGTACCTGCTACCCAAGTGATGAGCTACTGCCTTTGTTTGTTAACTGCTCTTGGCACATCTGCTACCTaGCTTCACCTGGAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: WVPATQVMSYCLCLLTALGTSAT*LHLERK
Trigger: TTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCC...AAGAGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTGGGTAGCAGGTACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AAGTTAGAGGAAACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCATGGCAAAGCACTTTTaGATCCTGTGGGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: KLEETQVLEDYLPISELGMAKHF*ILWAVV
Trigger: GACAACAGCCCACAGGATGCAAAAGTGCTTTGCCAT...GCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCTCTAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TCCTACTTTTCATTTGTGCCAGAAATGACAACATCCCTTTCCCATCCAGCAAGACAAGGAGGGTGCCAGTaGAGAGTGGCGTACTTCCTC +
Preference number: 4 (lower is better)
Translates to: SYFSFVPEMTTSLSHPARQGGCQ*RVAYFL
Trigger: GAGGAAGTACGCCACTCTCCACTGGCACCCTCCTTG...TCTTGCTGGATGGGAAAGGGATGTTGTCATTTCTGGCACAAATGAAAAGTAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTGGGGAGACTGGCATTTTTAAGATaGCAAAGCACTTTTGCATCC +
Preference number: 4 (lower is better)
Translates to: GTSATCLHLERKVAHLGRLAFLR*QSTFAS
Trigger: GGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAG...TCTCCCCAAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp TGGGTACCTGCTACCCAAGTGATGAGCTACTGCCTTTGTTTGTTAACTGCTCTTAGGAGTCACCATGGCTaGATTGGGGTTCAATCTTCC +
Preference number: 4 (lower is better)
Translates to: WVPATQVMSYCLCLLTALRSHHG*IGVQSS
Trigger: GGAAGATTGAACCCCAATTCAGCCATGGTGACTCCT...AAGAGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTGGGTAGCAGGTACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AGTGATCTGGCATTTTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGTCGGACACAGTTGCCTaGACAATCACCAGGTTAGGC +
Preference number: 4 (lower is better)
Translates to: SDLAFLRWQSTFASCGLLSDTVA*TITRLG
Trigger: GCCTAACCTGGTGATTGTGCAGGCAACTGTGTCCGA...CAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAGATCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp TTCTGGCATATTGCATGCCTGAAGGCAGAGCTAGCACTGCTACCTCCAATACAGTGGAATTTAGGCTTGTaGAAGAGGTCATTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FWHIACLKAELALLPPIQWNLGL*KRSFQA
Trigger: AGCCTGGAATGACCTCTTGCACAAGCCTAAATTCCA...CTGTATTGGAGGTAGCAGTGCTAGCTCTGCCTTCAGGCATGCAATATGCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AGCCTTCTCCTTTCATCCAGCGGTGCTAGAGACCTGGTGTTGATATCCACATTCCCTAAAATGGGTACCTaGTACCCAAGTGATGAGCTA +
Preference number: 4 (lower is better)
Translates to: SLLLSSSGARDLVLISTFPKMGT*YPSDEL
Trigger: TAGCTCATCACTTGGGTAGCAGGTACCCATTTTAGG...GAATGTGGATATCAACACCAGGTCTCTAGCACCGCTGGATGAAAGGAGAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TTGAATGAAAGCTCAGGCTTTCGAGGACAGAGTGAGGCTAGTCTTCCAGCTGGTTCAAAGGAGTCACCATaGCTGAATTGGGGTTCAATC +
Preference number: 4 (lower is better)
Translates to: LNESSGFRGQSEASLPAGSKESP*LNWGSI
Trigger: GATTGAACCCCAATTCAGCCATGGTGACTCCTTTGA...ACCAGCTGGAAGACTAGCCTCACTCTGTCCTCGAAAGCCTGAGCTTTCATTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp ATCTCTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGTCACAGCAGAAGAGCTaGAAGGAGTGGTATCCTGTG +
Preference number: 4 (lower is better)
Translates to: ISVSRSVYGVLSRYSCVTSQQKS*KEWYPV
Trigger: CACAGGATACCACTCCTTCCAGCTCTTCTGCTGTGA...CGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TCCTACTTTTCATTTGTGCCAGAAATGACAACATCCCTTTCCCATCCAGCAAGACTGATCTTGAGCCGATaGACAACAGCTCGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SYFSFVPEMTTSLSHPARLILSR*TTARGR
Trigger: CCTCCCACGAGCTGTTGTCCATCGGCTCAAGATCAG...TCTTGCTGGATGGGAAAGGGATGTTGTCATTTCTGGCACAAATGAAAAGTAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AGTGATCTGGCATTTTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGCTACTCATCCTGGGCTaGCATCCAAAGCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: SDLAFLRWQSTFASCGLLLLILG*HPKQPL
Trigger: AAGTGGCTGCTTTGGATGCCAGCCCAGGATGAGTAG...CAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAGATCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp ATCTCTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGCAGCCCTTACCAGTTTaGCATCAAAGGAGTCACCAT +
Preference number: 4 (lower is better)
Translates to: ISVSRSVYGVLSRYSCVTQPLPV*HQRSHH
Trigger: ATGGTGACTCCTTTGATGTCAAACTGGTAAGGGCTG...CGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GATAAACTGAATGAAAGGAGCTTTCCGTCCTACTTTTCATTTGTGCCAGAAATGAGGAGTGGTATCCTGTaGCCACGGCTCAGCCCTTAC +
Preference number: 4 (lower is better)
Translates to: DKLNERSFPSYFSFVPEMRSGIL*PRLSPY
Trigger: GTAAGGGCTGAGCCGTGGGCACAGGATACCACTCCT...CATTTCTGGCACAAATGAAAAGTAGGACGGAAAGCTCCTTTCATTCAGTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GATAAACTGAATGAAAGGAGCTTTCCGTCCTACTTTTCATTTGTGCCAGAAATGTTCTCTCCATACCCCTaGAGAGAGCAGGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: DKLNERSFPSYFSFVPEMFSPYP*REQGPP
Trigger: AGGTGGGCCCTGCTCTCTGCAGGGGTATGGAGAGAA...CATTTCTGGCACAAATGAAAAGTAGGACGGAAAGCTCCTTTCATTCAGTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AGCCTTCTCCTTTCATCCAGCGGTGCTAGAGACCTGGTGTTGATATCCACATTCTCACGGATGAATGCATaGATGAACAAACAACCTCTC +
Preference number: 4 (lower is better)
Translates to: SLLLSSSGARDLVLISTFSRMNA*MNKQPL
Trigger: GAGAGGTTGTTTGTTCATGCATGCATTCATCCGTGA...GAATGTGGATATCAACACCAGGTCTCTAGCACCGCTGGATGAAAGGAGAAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AAGTTAGAGGAAACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCTGTGTCACGGATGAATaGATGCATGAACAAACAACC +
Preference number: 4 (lower is better)
Translates to: KLEETQVLEDYLPISELGCVTDE*MHEQTT
Trigger: GGTTGTTTGTTCATGCATGCATTCATCCGTGACACA...GCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCTCTAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AGTGATCTGGCATTTTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGAATCAGAGACATCTGTaGAGAAGGGATGCTCAGCGG +
Preference number: 4 (lower is better)
Translates to: SDLAFLRWQSTFASCGLLNQRHL*RRDAQR
Trigger: CCGCTGAGCATCCCTTCTGCACAGATGTCTCTGATT...CAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAGATCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp TGGGTACCTGCTACCCAAGTGATGAGCTACTGCCTTTGTTTGTTAACTGCTCTTATGGCAAAGCACTTTTaGATCCTGTGGGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: WVPATQVMSYCLCLLTALMAKHF*ILWAVV
Trigger: GACAACAGCCCACAGGATGCAAAAGTGCTTTGCCAT...AAGAGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTGGGTAGCAGGTACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp CTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGGATGTCACCATGGCTGAATTaGGGTTCAATCTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LYPVLFMESSVGTHVSRMSPWLN*GSIFQR
Trigger: TCTCTGGAAGATTGAACCCCAATTCAGCCATGGTGA...CATCCGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp AGTGATCTGGCATTTTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGGCGGATGTGAACGTCTaGGTAGTGGGTAAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: SDLAFLRWQSTFASCGLLADVNV*VVGKVE
Trigger: TTCCACTTTACCCACTACCCAGACGTTCACATCCGC...CAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAGATCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GATAAACTGAATGAAAGGAGCTTTCCGTCCTACTTTTCATTTGTGCCAGAAATGCAGTGGATGTCCACGTaGGCCCAGCCACATCCAGAT +
Preference number: 4 (lower is better)
Translates to: DKLNERSFPSYFSFVPEMQWMST*AQPHPD
Trigger: ATCTGGATGTGGCTGGGCCCACGTGGACATCCACTG...CATTTCTGGCACAAATGAAAAGTAGGACGGAAAGCTCCTTTCATTCAGTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp CTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGGATGAGGAAACACAGGTGCTaGAGGATTACCTCCCTATTT +
Preference number: 4 (lower is better)
Translates to: LYPVLFMESSVGTHVSRMRKHRC*RITSLF
Trigger: AAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCT...CATCCGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp CCAACTGGCATGTTCAGGGTAGCTTCCTGGGCTGTGGGCCATTTTTGGATTGTGCAGCCACTTTTGCAGTaGAATCTTGGAATAACAATA +
Preference number: 4 (lower is better)
Translates to: PTGMFRVASWAVGHFWIVQPLLQ*NLGITI
Trigger: TATTGTTATTCCAAGATTCCACTGCAAAAGTGGCTG...CACAATCCAAAAATGGCCCACAGCCCAGGAAGCTACCCTGAACATGCCAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TTCTGGCATATTGCATGCCTGAAGGCAGAGCTAGCACTGCTACCTCCAATACAGTTTGGGGAAGATTCCTaGAATTTAGGCTTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: FWHIACLKAELALLPPIQFGEDS*NLGLCK
Trigger: CTTGCACAAGCCTAAATTCCAGGAATCTTCCCCAAA...CTGTATTGGAGGTAGCAGTGCTAGCTCTGCCTTCAGGCATGCAATATGCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GTGGGCCAGCACCACCTTTTGACAAACGTGGACAGAACCCAAATTGTTTATCTCAGATTGCAGAGGATCTaGGATTTGGGGAAGATTCCT +
Preference number: 4 (lower is better)
Translates to: VGQHHLLTNVDRTQIVYLRLQRI*DLGKIP
Trigger: AGGAATCTTCCCCAAATCCCAGATCCTCTGCAATCT...GAGATAAACAATTTGGGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR CAA 72 bp TTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTaGTCTGTAGTTCTGGCATATTGCATGCCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: LRWQSTFASCGL*SVVLAYCMPEG
Trigger: GCCTTCAGGCATGCAATATGCCAGAACTACAGACAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp TTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGTCTGTAGTTCTGGCGCCATTTTTGGATTGTaGAATCGATTTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FKMAKHFCILWAVVCSSGAIFGL*NRFPQR
Trigger: CCTCTGGGGAAATCGATTTCACAATCCAAAAATGGC...GCCAGAACTACAGACAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp GATAAACTGAATGAAAGGAGCTTTCCGTCCTACTTTTCATTTGTGCCAGAAATGTTGCCAATCTTCTCCTaGTTCCGCCACTTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: DKLNERSFPSYFSFVPEMLPIFS*FRHLAR
Trigger: GCGAGCCAAGTGGCGGAAGCAGGAGAAGATTGGCAA...CATTTCTGGCACAAATGAAAAGTAGGACGGAAAGCTCCTTTCATTCAGTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp CTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGGATGTCACGGATGAATGCATaGATGAACAAACAACCTCTC +
Preference number: 4 (lower is better)
Translates to: LYPVLFMESSVGTHVSRMSRMNA*MNKQPL
Trigger: GAGAGGTTGTTTGTTCATGCATGCATTCATCCGTGA...CATCCGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp TCCTACTTTTCATTTGTGCCAGAAATGACAACATCCCTTTCCCATCCAGCAAGACTCCACACTGGGCCTTaGCCTCACTTTGCAAAATAC +
Preference number: 4 (lower is better)
Translates to: SYFSFVPEMTTSLSHPARLHTGP*PHFAKY
Trigger: GTATTTTGCAAAGTGAGGGCAAGGCCCAGTGTGGAG...TCTTGCTGGATGGGAAAGGGATGTTGTCATTTCTGGCACAAATGAAAAGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp AGTGATCTGGCATTTTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGGTAGTTCTGGCATATTaGATGCCTGAAGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SDLAFLRWQSTFASCGLLVVLAY*MPEGRA
Trigger: AGCTCTGCCTTCAGGCATGCAATATGCCAGAACTAC...CAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAGATCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp ATCTCTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGAGGAAACACAGGTGCTaGAGGATTACCTCCCTATTT +
Preference number: 4 (lower is better)
Translates to: ISVSRSVYGVLSRYSCVTRKHRC*RITSLF
Trigger: AAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCT...CGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGTCTGTAGTTCTGGCTCTTTGAGGCAGGCCTaGCTACCTTCATTTTATGGA +
Preference number: 4 (lower is better)
Translates to: FKMAKHFCILWAVVCSSGSLRQA*LPSFYG
Trigger: TCCATAAAATGAAGGTAGCCAGGCCTGCCTCAAAGA...GCCAGAACTACAGACAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp ATCTCTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGATGGAAATAGGGAGTTaGATGAAAGCTCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: ISVSRSVYGVLSRYSCVTMEIGS*MKAQAF
Trigger: GAAAGCCTGAGCTTTCATTCAACTCCCTATTTCCAT...CGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp TTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGTCTGTAGTTCTGGCTGTGTCACGGATGAATaGATGCATGAACAAACAACC +
Preference number: 4 (lower is better)
Translates to: FKMAKHFCILWAVVCSSGCVTDE*MHEQTT
Trigger: GGTTGTTTGTTCATGCATGCATTCATCCGTGACACA...GCCAGAACTACAGACAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TCCTACTTTTCATTTGTGCCAGAAATGACAACATCCCTTTCCCATCCAGCAAGAGGAAAGTGGCTCATTTaGGGAGAGCATGTCCAATCT +
Preference number: 4 (lower is better)
Translates to: SYFSFVPEMTTSLSHPARGKWLI*GEHVQS
Trigger: AGATTGGACATGCTCTCCCCAAATGAGCCACTTTCC...TCTTGCTGGATGGGAAAGGGATGTTGTCATTTCTGGCACAAATGAAAAGTAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TGGGTACCTGCTACCCAAGTGATGAGCTACTGCCTTTGTTTGTTAACTGCTCTTAGAGGATCTGGGATTTaGGGAAGATTCCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: WVPATQVMSYCLCLLTALRGSGI*GRFLEF
Trigger: AAATTCCAGGAATCTTCCCCAAATCCCAGATCCTCT...AAGAGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTGGGTAGCAGGTACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GTGGGCCAGCACCACCTTTTGACAAACGTGGACAGAACCCAAATTGTTTATCTCCTGGCATTTTTAAGATaGCAAAGCACTTTTGCATCC +
Preference number: 4 (lower is better)
Translates to: VGQHHLLTNVDRTQIVYLLAFLR*QSTFAS
Trigger: GGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAG...GAGATAAACAATTTGGGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
3UTR CAA 72 bp GAATCTTGGAATAACAATATCACTCCACACTGGGCCTaGCCCTCACTTTGCAAAATACTCTCATGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: ESWNNNITPHWA*PSLCKILSCPL
Trigger: GAGAGGACATGAGAGTATTTTGCAAAGTGAGGGCAAGGCCCAGTGTGGAGTGATATTGTTATTCCAAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp TCCTACTTTTCATTTGTGCCAGAAATGACAACATCCCTTTCCCATCCAGCAAGAGCCATTTTTGGATTGTaGAATCGATTTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SYFSFVPEMTTSLSHPARAIFGL*NRFPQR
Trigger: CCTCTGGGGAAATCGATTTCACAATCCAAAAATGGC...TCTTGCTGGATGGGAAAGGGATGTTGTCATTTCTGGCACAAATGAAAAGTAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp AGTGATCTGGCATTTTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGATGGAAATAGGGAGTTaGATGAAAGCTCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SDLAFLRWQSTFASCGLLMEIGS*MKAQAF
Trigger: GAAAGCCTGAGCTTTCATTCAACTCCCTATTTCCAT...CAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAGATCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp TGGGTACCTGCTACCCAAGTGATGAGCTACTGCCTTTGTTTGTTAACTGCTCTTTTCATAGGCTCTGAGTaGTCTGGCATTTTTAAGATG +
Preference number: 4 (lower is better)
Translates to: WVPATQVMSYCLCLLTALFIGSE*SGIFKM
Trigger: CATCTTAAAAATGCCAGATCACTCAGAGCCTATGAA...AAGAGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTGGGTAGCAGGTACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TCCTACTTTTCATTTGTGCCAGAAATGACAACATCCCTTTCCCATCCAGCAAGATCACCATGGCTGAATTaGGGTTCAATCTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SYFSFVPEMTTSLSHPARSPWLN*GSIFQR
Trigger: TCTCTGGAAGATTGAACCCCAATTCAGCCATGGTGA...TCTTGCTGGATGGGAAAGGGATGTTGTCATTTCTGGCACAAATGAAAAGTAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GATAAACTGAATGAAAGGAGCTTTCCGTCCTACTTTTCATTTGTGCCAGAAATGTGCAAGTTTGATGGATaGGAAGACCTGGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: DKLNERSFPSYFSFVPEMCKFDG*EDLGQA
Trigger: AGCCTGTCCCAGGTCTTCCCATCCATCAAACTTGCA...CATTTCTGGCACAAATGAAAAGTAGGACGGAAAGCTCCTTTCATTCAGTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp GATAAACTGAATGAAAGGAGCTTTCCGTCCTACTTTTCATTTGTGCCAGAAATGCTACCTGCCTTCACCTaGAGAGGAAAGTGGCTCATT +
Preference number: 4 (lower is better)
Translates to: DKLNERSFPSYFSFVPEMLPAFT*RGKWLI
Trigger: AATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAG...CATTTCTGGCACAAATGAAAAGTAGGACGGAAAGCTCCTTTCATTCAGTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp CTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGGATGTTTGCAGTGGAATCTTaGAATAACAATATCACTCCA +
Preference number: 4 (lower is better)
Translates to: LYPVLFMESSVGTHVSRMFAVES*NNNITP
Trigger: TGGAGTGATATTGTTATTCCAAGATTCCACTGCAAA...CATCCGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TGGGTACCTGCTACCCAAGTGATGAGCTACTGCCTTTGTTTGTTAACTGCTCTTCAGCCACTTTTGCAGTaGAATCTTGGAATAACAATA +
Preference number: 4 (lower is better)
Translates to: WVPATQVMSYCLCLLTALQPLLQ*NLGITI
Trigger: TATTGTTATTCCAAGATTCCACTGCAAAAGTGGCTG...AAGAGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTGGGTAGCAGGTACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR TCA 90 bp TCCTACTTTTCATTTGTGCCAGAAATGACAACATCCCTTTCCCATCCAGCAAGATTCATAGGCTCTGAGTaGTCTGGCATTTTTAAGATG +
Preference number: 4 (lower is better)
Translates to: SYFSFVPEMTTSLSHPARFIGSE*SGIFKM
Trigger: CATCTTAAAAATGCCAGATCACTCAGAGCCTATGAA...TCTTGCTGGATGGGAAAGGGATGTTGTCATTTCTGGCACAAATGAAAAGTAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR GCA 90 bp TCCTACTTTTCATTTGTGCCAGAAATGACAACATCCCTTTCCCATCCAGCAAGACAAGTGATGAGCTACTaGCTTTGTTTGTTAACTGCT +
Preference number: 4 (lower is better)
Translates to: SYFSFVPEMTTSLSHPARQVMSY*LCLLTA
Trigger: AGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTG...TCTTGCTGGATGGGAAAGGGATGTTGTCATTTCTGGCACAAATGAAAAGTAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CCA 90 bp TCCTACTTTTCATTTGTGCCAGAAATGACAACATCCCTTTCCCATCCAGCAAGATTTGCAGTGGAATCTTaGAATAACAATATCACTCCA +
Preference number: 4 (lower is better)
Translates to: SYFSFVPEMTTSLSHPARFAVES*NNNITP
Trigger: TGGAGTGATATTGTTATTCCAAGATTCCACTGCAAA...TCTTGCTGGATGGGAAAGGGATGTTGTCATTTCTGGCACAAATGAAAAGTAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CCA 90 bp GATCCAGGCAGGGAACCAGGCAGAGGCCAGCTGATCTTGAGCCGATaGACAACAGCTCGTGGGAGGAGCCAGCCTGCGCAGAGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: DPGREPGRGQLILSR*TTARGRSQPAQSSG
Trigger: TCCACTGCTCTGCGCAGGCTGGCTCCTCCCACGAGCTGTTGTCCATCGGCTCAAGATCAGCTGGCCTCTGCCTGGTTCCCTGCCTGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CCA 90 bp ATGGATGGGAAGACCTGGGACAGGCTGTGTTTCCCATGGGTGCGCTaGGAGGAGGGTGATCCAGGCAGGGAACCAGGCAGAGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: MDGKTWDRLCFPWVR*EEGDPGREPGRGQL
Trigger: CAGCTGGCCTCTGCCTGGTTCCCTGCCTGGATCACCCTCCTCCCAGCGCACCCATGGGAAACACAGCCTGTCCCAGGTCTTCCCATCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS TCA 90 bp GTACCTTCAGCGCATCAGTGCTCCTGCTGTCCTGCAGGTGGAGGCTaGGGAAAGGGGGTCCCTGGGTGCTGCCAGGCCTGTCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: VPSAHQCSCCPAGGG*GKGVPGCCQACLFS
Trigger: AGAGAAGAGACAGGCCTGGCAGCACCCAGGGACCCCCTTTCCTCAGCCTCCACCTGCAGGACAGCAGGAGCACTGATGCGCTGAAGGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS TCA 90 bp ATCCCTTCAGCGCATCAGTGCTCCTGCTGTCCTGCAGGTGGAGGCTaGGGAAAGGGGGTCCCTGGGTGCTGCCAGGCCTGTCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: IPSAHQCSCCPAGGG*GKGVPGCCQACLFS
Trigger: AGAGAAGAGACAGGCCTGGCAGCACCCAGGGACCCCCTTTCCTCAGCCTCCACCTGCAGGACAGCAGGAGCACTGATGCGCTGAAGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404699.7
CDS GCA 90 bp GCCACATCCAGATTTGTGGGCAGGGCCACACTGGCTTCACTCAGCTaGTGTGGAGCCCCCAGGTTGCCAATCTTCTCCTGCTTCCGCCAC +
Preference number: 5 (lower is better)
Translates to: ATSRFVGRATLASLS*CGAPRLPIFSCFRH
Trigger: GTGGCGGAAGCAGGAGAAGATTGGCAACCTGGGGGCTCCACAGCAGCTGAGTGAAGCCAGTGTGGCCCTGCCCACAAATCTGGATGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CCA 90 bp TCCACGTGGGCCCAGCCACATCCAGATTTGTGGGCAGGGCCACACTaGCTTCACTCAGCTGCTGTGGAGCCCCCAGGTTGCCAATCTTCT +
Preference number: 5 (lower is better)
Translates to: STWAQPHPDLWAGPH*LHSAAVEPPGCQSS
Trigger: AGAAGATTGGCAACCTGGGGGCTCCACAGCAGCTGAGTGAAGCCAGTGTGGCCCTGCCCACAAATCTGGATGTGGCTGGGCCCACGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CCA 90 bp CTTCTGGCCCTTTCCTGTGGCTCTAGCCAGCCTTTAGGAGGAGGTTaGAGTGCCACCCTTGGCCTCAGGTGGCCAATTCAGTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LLALSCGSSQPLGGG*SATLGLRWPIQSWA
Trigger: AGCCCAGGACTGAATTGGCCACCTGAGGCCAAGGGTGGCACTCCAACCTCCTCCTAAAGGCTGGCTAGAGCCACAGGAAAGGGCCAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS CCA 90 bp ATCCAGATTTGTGGGCAGGGCCACACTGGCTTCACTCAGCTGCTGTaGAGCCCCCAGGTTGCCAATCTTCTCCTGCTTCCGCCACTTGGC +
Preference number: 5 (lower is better)
Translates to: IQICGQGHTGFTQLL*SPQVANLLLLPPLG
Trigger: GCCAAGTGGCGGAAGCAGGAGAAGATTGGCAACCTGGGGGCTCCACAGCAGCTGAGTGAAGCCAGTGTGGCCCTGCCCACAAATCTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp AGGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTCGAGCTTCTGGGAGGTaGATCCTGGCTGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: RPRAHLLPAFTWRGKWLIRASGR*ILAASW
Trigger: CCAGCTGGCAGCCAGGATCAACCTCCCAGAAGCTCG...AATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp AGACCTAGGCTTCCCAACTCCCGGTCCAACTCCTGGGTGGGTCAGGGGTGCAGGCACAGGGATGCAAGTTaGATGGATGGGAAGACCTGG +
Preference number: 5 (lower is better)
Translates to: RPRLPNSRSNSWVGQGCRHRDAS*MDGKTW
Trigger: CCAGGTCTTCCCATCCATCAAACTTGCATCCCTGTG...CCTGCACCCCTGACCCACCCAGGAGTTGGACCGGGAGTTGGGAAGCCTAGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS GCA 90 bp CTGGAACCAGATCTGCACCCGAGCTTCTGGGAGGTTGATCCTGGCTaGCAGCTGGCTGCGGATGTGAACGTCTGGGTAGTGGGTAAAGTG +
Preference number: 5 (lower is better)
Translates to: LEPDLHPSFWEVDPG*QLAADVNVWVVGKV
Trigger: CACTTTACCCACTACCCAGACGTTCACATCCGCAGCCAGCTGGCAGCCAGGATCAACCTCCCAGAAGCTCGGGTGCAGATCTGGTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CCA 90 bp GGAGGTTGGAGTGCCACCCTTGGCCTCAGGTGGCCAATTCAGTCCTaGGCTTTACTGCAGCTTGAGGGGTCTTCCCAGACACCCGTGTTT +
Preference number: 5 (lower is better)
Translates to: GGWSATLGLRWPIQS*ALLQLEGSSQTPVF
Trigger: AAACACGGGTGTCTGGGAAGACCCCTCAAGCTGCAGTAAAGCCCAGGACTGAATTGGCCACCTGAGGCCAAGGGTGGCACTCCAACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS CCA 90 bp AGCCAGCCTTTAGGAGGAGGTTGGAGTGCCACCCTTGGCCTCAGGTaGCCAATTCAGTCCTGGGCTTTACTGCAGCTTGAGGGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: SQPLGGGWSATLGLR*PIQSWALLQLEGSS
Trigger: GGAAGACCCCTCAAGCTGCAGTAAAGCCCAGGACTGAATTGGCCACCTGAGGCCAAGGGTGGCACTCCAACCTCCTCCTAAAGGCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS CCA 90 bp CTCCAGAGGAGGTTTGGAGGCAGGGGTCCACCTTTGCCCTTTCTCTaGCTTCTGGCCCTTTCCTGTGGCTCTAGCCAGCCTTTAGGAGGA +
Preference number: 5 (lower is better)
Translates to: LQRRFGGRGPPLPFL*LLALSCGSSQPLGG
Trigger: TCCTCCTAAAGGCTGGCTAGAGCCACAGGAAAGGGCCAGAAGCCAGAGAAAGGGCAAAGGTGGACCCCTGCCTCCAAACCTCCTCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS-3UTR CAA 90 bp AGGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTCCTGGGGCTGGTCCTTaGGAGGCTTTTCTAGCCCAG +
Preference number: 5 (lower is better)
Translates to: RPRAHLLPAFTWRGKWLIPGAGP*EAFLAQ
Trigger: CTGGGCTAGAAAAGCCTCCAAAGGACCAGCCCCAGG...AATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CCA 90 bp TTCGTGTCCACAGGGACTTCCATGGGCAGGTCACAGCAGAAGAGCTaGAAGGAGTGGTATCCTGTGCCCACGGCTCAGCCCTTACCAGTT +
Preference number: 5 (lower is better)
Translates to: FVSTGTSMGRSQQKS*KEWYPVPTAQPLPV
Trigger: AACTGGTAAGGGCTGAGCCGTGGGCACAGGATACCACTCCTTCCAGCTCTTCTGCTGTGACCTGCCCATGGAAGTCCCTGTGGACACGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CCA 90 bp GGCCCTCTTCACCTGGCCCTTCTGGTCTGTCCATATCACTCCTCCTaGCAGGCCTCTTTAGGATCGCCTCAATGGAGAAGGACAGGCTCA +
Preference number: 5 (lower is better)
Translates to: GPLHLALLVCPYHSS*QASLGSPQWRRTGS
Trigger: TGAGCCTGTCCTTCTCCATTGAGGCGATCCTAAAGAGGCCTGCCAGGAGGAGTGATATGGACAGACCAGAAGGGCCAGGTGAAGAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp GGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTGGGGAGACAGATGCTGCCCCATTaGGGGTGTGGAGGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: GTSATCLHLERKVAHLGRQMLPH*GCGGGR
Trigger: CCTTCCACCTCCACACCCCAAATGGGGCAGCATCTG...TCTCCCCAAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS GCA 90 bp GTGCCACCCTTGGCCTCAGGTGGCCAATTCAGTCCTGGGCTTTACTaGAGCTTGAGGGGTCTTCCCAGACACCCGTGTTTACTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: VPPLASGGQFSPGLY*SLRGLPRHPCLLPS
Trigger: TGAAGGAAGTAAACACGGGTGTCTGGGAAGACCCCTCAAGCTGCAGTAAAGCCCAGGACTGAATTGGCCACCTGAGGCCAAGGGTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS CCA 90 bp GTGGAGGTGGAAGGATGCATAGCACAGGGATGCAAGTTTGATGGATaGGAAGACCTGGGACAGGCTGTGTTTCCCATGGGTGCGCTGGGA +
Preference number: 5 (lower is better)
Translates to: VEVEGCIAQGCKFDG*EDLGQAVFPMGALG
Trigger: TCCCAGCGCACCCATGGGAAACACAGCCTGTCCCAGGTCTTCCCATCCATCAAACTTGCATCCCTGTGCTATGCATCCTTCCACCTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp GGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAGAGAGGCCAGCTGATCTaGAGCCGATGGACAACAGCT +
Preference number: 5 (lower is better)
Translates to: GAGPVLHLQGQESETSVQRGQLI*SRWTTA
Trigger: AGCTGTTGTCCATCGGCTCAAGATCAGCTGGCCTCT...CTGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp AGGCCCAGGGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTGGCCAGCACCACCTTTaGACAAACGTGGACAGAACC +
Preference number: 5 (lower is better)
Translates to: RPRAHLLPAFTWRGKWLIGQHHL*TNVDRT
Trigger: GGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCC...AATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCCCTGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp GGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAGGGCCAGCACCACCTTTaGACAAACGTGGACAGAACC +
Preference number: 5 (lower is better)
Translates to: GAGPVLHLQGQESETSVQGQHHL*TNVDRT
Trigger: GGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCC...CTGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp AGACCTAGGCTTCCCAACTCCCGGTCCAACTCCTGGGTGGGTCAGGGGTGCAGGAGCTACTGCCTTTGTTaGTTAACTGCTCTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: RPRLPNSRSNSWVGQGCRSYCLC*LTALSS
Trigger: GGAGGAAAGAGCAGTTAACAAACAAAGGCAGTAGCT...CCTGCACCCCTGACCCACCCAGGAGTTGGACCGGGAGTTGGGAAGCCTAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS TCA 90 bp CCTTGGCCTCAGGTGGCCAATTCAGTCCTGGGCTTTACTGCAGCTTaGGGGGTCTTCCCAGACACCCGTGTTTACTTCCTTCAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: PWPQVANSVLGFTAA*GVFPDTRVYFLQFC
Trigger: GCAGAACTGAAGGAAGTAAACACGGGTGTCTGGGAAGACCCCTCAAGCTGCAGTAAAGCCCAGGACTGAATTGGCCACCTGAGGCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS TCA 90 bp TCGGACACAGTTGCCTGCACAATCACCAGGTTAGGCCAGGATCCCTaGGGTCACCGCCCAGTGGCGAACAAAGAGAAGAGGGAGAAACAA +
Preference number: 5 (lower is better)
Translates to: SDTVACTITRLGQDP*GHRPVANKEKREKQ
Trigger: TTGTTTCTCCCTCTTCTCTTTGTTCGCCACTGGGCGGTGACCTCAGGGATCCTGGCCTAACCTGGTGATTGTGCAGGCAACTGTGTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS TCA 90 bp TTGGGGTGTGGAGGTGGAAGGATGCATAGCACAGGGATGCAAGTTTaGTGGATGGGAAGACCTGGGACAGGCTGTGTTTCCCATGGGTGC +
Preference number: 5 (lower is better)
Translates to: LGCGGGRMHSTGMQV*WMGRPGTGCVSHGC
Trigger: GCACCCATGGGAAACACAGCCTGTCCCAGGTCTTCCCATCCATCAAACTTGCATCCCTGTGCTATGCATCCTTCCACCTCCACACCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp TTGAATGAAAGCTCAGGCTTTCGAGGACAGAGTGAGGCTAGTCTTCCAGCTGGTCGAGCTTCTGGGAGGTaGATCCTGGCTGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LNESSGFRGQSEASLPAGRASGR*ILAASW
Trigger: CCAGCTGGCAGCCAGGATCAACCTCCCAGAAGCTCG...ACCAGCTGGAAGACTAGCCTCACTCTGTCCTCGAAAGCCTGAGCTTTCATTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp CCAACTGGCATGTTCAGGGTAGCTTCCTGGGCTGTGGGCCATTTTTGGATTGTGTGTGGAGCCCCCAGGTaGCCAATCTTCTCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: PTGMFRVASWAVGHFWIVCGAPR*PIFSCF
Trigger: GAAGCAGGAGAAGATTGGCAACCTGGGGGCTCCACA...CACAATCCAAAAATGGCCCACAGCCCAGGAAGCTACCCTGAACATGCCAGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp ACAGGAACTACTCATCCTGGGCTGGCATCCAAAGCAGCCACTTTTGCAGTGGAACAGATGCTGCCCCATTaGGGGTGTGGAGGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: TGTTHPGLASKAATFAVEQMLPH*GCGGGR
Trigger: CCTTCCACCTCCACACCCCAAATGGGGCAGCATCTG...TTCCACTGCAAAAGTGGCTGCTTTGGATGCCAGCCCAGGATGAGTAGTTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp AGACCTAGGCTTCCCAACTCCCGGTCCAACTCCTGGGTGGGTCAGGGGTGCAGGGATGAGCTACTGCCTTaGTTTGTTAACTGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: RPRLPNSRSNSWVGQGCRDELLP*FVNCSF
Trigger: GAAAGAGCAGTTAACAAACAAAGGCAGTAGCTCATC...CCTGCACCCCTGACCCACCCAGGAGTTGGACCGGGAGTTGGGAAGCCTAGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS TCA 90 bp TCAAGAGGGCGCGTGGAGGTGAAGAACAGAGAGCCTCCAGTTAGATaGTCCAAACAGGATTTCGTGTCCACAGGGACTTCCATGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SRGRVEVKNREPPVR*SKQDFVSTGTSMGR
Trigger: CCTGCCCATGGAAGTCCCTGTGGACACGAAATCCTGTTTGGATCATCTAACTGGAGGCTCTCTGTTCTTCACCTCCACGCGCCCTCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS GCA 90 bp GAATTGGGGTTCAATCTTCCAGAGAAGGGTCTTCTCGGACACAGTTaGCTGCACAATCACCAGGTTAGGCCAGGATCCCTGAGGTCACCG +
Preference number: 5 (lower is better)
Translates to: ELGFNLPEKGLLGHS*LHNHQVRPGSLRSP
Trigger: CGGTGACCTCAGGGATCCTGGCCTAACCTGGTGATTGTGCAGGCAACTGTGTCCGAGAAGACCCTTCTCTGGAAGATTGAACCCCAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS GCA 90 bp TGGGGTTCAATCTTCCAGAGAAGGGTCTTCTCGGACACAGTTGCCTaGACAATCACCAGGTTAGGCCAGGATCCCTTCAGCGCATCAGTG +
Preference number: 5 (lower is better)
Translates to: WGSIFQRRVFSDTVA*TITRLGQDPFSASV
Trigger: CACTGATGCGCTGAAGGGATCCTGGCCTAACCTGGTGATTGTGCAGGCAACTGTGTCCGAGAAGACCCTTCTCTGGAAGATTGAACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404699.7
CDS-3UTR CAA 90 bp AACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCCTGAGATCTCAGTACGAACCCTCCGCTaGCTCTTCCTTCCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: NTGAGGLPPYFRARPEISVRTLR*LFLPSW
Trigger: CCAGGAAGGAAGGAAGAGCAAGCGGAGGGTTCGTAC...TGAGATCTCAGGCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp AATCAGAGACATCTGTGCAGAAGGGATGCTCAGCGGATGACCTCCCTGAGAACATGTGGAGCCCCCAGGTaGCCAATCTTCTCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: NQRHLCRRDAQRMTSLRTCGAPR*PIFSCF
Trigger: GAAGCAGGAGAAGATTGGCAACCTGGGGGCTCCACA...TGTTCTCAGGGAGGTCATCCGCTGAGCATCCCTTCTGCACAGATGTCTCTGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp GGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCAGAGGAAAGTGGCTCATTaGGGGAGAGCATGTCCAATC +
Preference number: 5 (lower is better)
Translates to: GAGPVLHLQGQESETSVQRKVAH*GRACPI
Trigger: GATTGGACATGCTCTCCCCAAATGAGCCACTTTCCT...CTGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS GCA 90 bp GAATTGGGGTTCAATCTTCCAGAGAAGGGTCTTCTCGGACACAGTTaGCTGCACAATCACCAGGTTAGGCCAGGATCCCTTCAGCGCATC +
Preference number: 5 (lower is better)
Translates to: ELGFNLPEKGLLGHS*LHNHQVRPGSLQRI
Trigger: GATGCGCTGAAGGGATCCTGGCCTAACCTGGTGATTGTGCAGGCAACTGTGTCCGAGAAGACCCTTCTCTGGAAGATTGAACCCCAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404699.7
CDS CCA 90 bp GCCCACGGCTCAGCCCTTACCAGTTTGACATCAAAGGAGTCACCATaGCTGAATTGGGGTTCAATCTTCCAGAGAAGGGTCTTCTCGGAC +
Preference number: 5 (lower is better)
Translates to: AHGSALTSLTSKESP*LNWGSIFQRRVFSD
Trigger: GTCCGAGAAGACCCTTCTCTGGAAGATTGAACCCCAATTCAGCCATGGTGACTCCTTTGATGTCAAACTGGTAAGGGCTGAGCCGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp GTGGGCCAGCACCACCTTTTGACAAACGTGGACAGAACCCAAATTGTTTATCTCCCTGGGGCTGGTCCTTaGGAGGCTTTTCTAGCCCAG +
Preference number: 5 (lower is better)
Translates to: VGQHHLLTNVDRTQIVYLPGAGP*EAFLAQ
Trigger: CTGGGCTAGAAAAGCCTCCAAAGGACCAGCCCCAGG...GAGATAAACAATTTGGGTTCTGTCCACGTTTGTCAAAAGGTGGTGCTGGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp AACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCCTGAGATCTCAAGAGGCCAGCTGATCTaGAGCCGATGGACAACAGCT +
Preference number: 5 (lower is better)
Translates to: NTGAGGLPPYFRARPEISRGQLI*SRWTTA
Trigger: AGCTGTTGTCCATCGGCTCAAGATCAGCTGGCCTCT...TGAGATCTCAGGCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp CTCCTGGGTGGGTCAGGGGTGCAGGTAGATTGCAGAGGATCTGGGATTTGGGGAAAGAATGTGTTAGACTaGGGCCAACAGCAAGGTTGT +
Preference number: 5 (lower is better)
Translates to: LLGGSGVQVDCRGSGIWGKNVLD*GQQQGC
Trigger: ACAACCTTGCTGTTGGCCCAAGTCTAACACATTCTT...TCCCCAAATCCCAGATCCTCTGCAATCTACCTGCACCCCTGACCCACCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp GGGAGCAGGCCCTGTCCTCCACCTGCAAGGACAAGAATCAGAGACATCTGTGCATCCTGGAATTTAGGCTaGTGCAAGAGGTCATTCCAG +
Preference number: 5 (lower is better)
Translates to: GSRPCPPPARTRIRDICASWNLG*CKRSFQ
Trigger: CTGGAATGACCTCTTGCACAAGCCTAAATTCCAGGA...TGCACAGATGTCTCTGATTCTTGTCCTTGCAGGTGGAGGACAGGGCCTGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp GGCACATCTGCTACCTGCCTTCACCTGGAGAGGAAAGTGGCTCATTTGGGGAGAGCATCCTGTGGGCTGTaGTCTGTAGTTCTGGCATAT +
Preference number: 5 (lower is better)
Translates to: GTSATCLHLERKVAHLGRASCGL*SVVLAY
Trigger: ATATGCCAGAACTACAGACAACAGCCCACAGGATGC...TCTCCCCAAATGAGCCACTTTCCTCTCCAGGTGAAGGCAGGTAGCAGATGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp CTCCTGGGTGGGTCAGGGGTGCAGGTAGATTGCAGAGGATCTGGGATTTGGGGAAGCTACTGCCTTTGTTaGTTAACTGCTCTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LLGGSGVQVDCRGSGIWGSYCLC*LTALSS
Trigger: GGAGGAAAGAGCAGTTAACAAACAAAGGCAGTAGCT...TCCCCAAATCCCAGATCCTCTGCAATCTACCTGCACCCCTGACCCACCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp ACAGGAACTACTCATCCTGGGCTGGCATCCAAAGCAGCCACTTTTGCAGTGGAACACAGGGATGCAAGTTaGATGGATGGGAAGACCTGG +
Preference number: 5 (lower is better)
Translates to: TGTTHPGLASKAATFAVEHRDAS*MDGKTW
Trigger: CCAGGTCTTCCCATCCATCAAACTTGCATCCCTGTG...TTCCACTGCAAAAGTGGCTGCTTTGGATGCCAGCCCAGGATGAGTAGTTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp AAGTTAGAGGAAACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCTCTTCTCGGACACAGTaGCCTGCACAATCACCAGGT +
Preference number: 5 (lower is better)
Translates to: KLEETQVLEDYLPISELGSSRTQ*PAQSPG
Trigger: ACCTGGTGATTGTGCAGGCAACTGTGTCCGAGAAGA...GCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCTCTAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp AACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCCTGAGATCTCAGTCACCATGGCTGAATaGGGGTTCAATCTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: NTGAGGLPPYFRARPEISVTMAE*GFNLPE
Trigger: CTCTGGAAGATTGAACCCCAATTCAGCCATGGTGAC...TGAGATCTCAGGCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp AAGTTAGAGGAAACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCAGGGGTGCAGGTAGATaGCAGAGGATCTGGGATTTG +
Preference number: 5 (lower is better)
Translates to: KLEETQVLEDYLPISELGRGAGR*QRIWDL
Trigger: CAAATCCCAGATCCTCTGCAATCTACCTGCACCCCT...GCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCTCTAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CCA 90 bp TCAGCCCTTACCAGTTTGACATCAAAGGAGTCACCATGGCTGAATTaGGGTTCAATCTTCCAGAGAAGGGTCTTCTCGGACACAGTTGCC +
Preference number: 5 (lower is better)
Translates to: SALTSLTSKESPWLN*GSIFQRRVFSDTVA
Trigger: GGCAACTGTGTCCGAGAAGACCCTTCTCTGGAAGATTGAACCCCAATTCAGCCATGGTGACTCCTTTGATGTCAAACTGGTAAGGGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp TTCTGGCATATTGCATGCCTGAAGGCAGAGCTAGCACTGCTACCTCCAATACAGAGGAAAGTGGCTCATTaGGGGAGAGCATGTCCAATC +
Preference number: 5 (lower is better)
Translates to: FWHIACLKAELALLPPIQRKVAH*GRACPI
Trigger: GATTGGACATGCTCTCCCCAAATGAGCCACTTTCCT...CTGTATTGGAGGTAGCAGTGCTAGCTCTGCCTTCAGGCATGCAATATGCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp CTGTATCCCGTTCTGTTTATGGAGTCCTCAGTAGGTACTCATGTGTCACGGATGGTCACCATGGCTGAATaGGGGTTCAATCTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: LYPVLFMESSVGTHVSRMVTMAE*GFNLPE
Trigger: CTCTGGAAGATTGAACCCCAATTCAGCCATGGTGAC...CATCCGTGACACATGAGTACCTACTGAGGACTCCATAAACAGAACGGGATACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp TTGAATGAAAGCTCAGGCTTTCGAGGACAGAGTGAGGCTAGTCTTCCAGCTGGTTCAGCCCTTACCAGTTaGACATCAAAGGAGTCACCA +
Preference number: 5 (lower is better)
Translates to: LNESSGFRGQSEASLPAGSALTS*TSKESP
Trigger: TGGTGACTCCTTTGATGTCAAACTGGTAAGGGCTGA...ACCAGCTGGAAGACTAGCCTCACTCTGTCCTCGAAAGCCTGAGCTTTCATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp TCCTACTTTTCATTTGTGCCAGAAATGACAACATCCCTTTCCCATCCAGCAAGAGTACGAACCCTCCGCTaGCTCTTCCTTCCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: SYFSFVPEMTTSLSHPARVRTLR*LFLPSW
Trigger: CCAGGAAGGAAGGAAGAGCAAGCGGAGGGTTCGTAC...TCTTGCTGGATGGGAAAGGGATGTTGTCATTTCTGGCACAAATGAAAAGTAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp TTGAATGAAAGCTCAGGCTTTCGAGGACAGAGTGAGGCTAGTCTTCCAGCTGGTTCCTGGAATTTAGGCTaGTGCAAGAGGTCATTCCAG +
Preference number: 5 (lower is better)
Translates to: LNESSGFRGQSEASLPAGSWNLG*CKRSFQ
Trigger: CTGGAATGACCTCTTGCACAAGCCTAAATTCCAGGA...ACCAGCTGGAAGACTAGCCTCACTCTGTCCTCGAAAGCCTGAGCTTTCATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp AAGTTAGAGGAAACACAGGTGCTGGAGGATTACCTCCCTATTTCAGAGCTCGGCGCTAGAGACCTGGTGTaGATATCCACATTCATAGGC +
Preference number: 5 (lower is better)
Translates to: KLEETQVLEDYLPISELGARDLV*ISTFIG
Trigger: GCCTATGAATGTGGATATCAACACCAGGTCTCTAGC...GCCGAGCTCTGAAATAGGGAGGTAATCCTCCAGCACCTGTGTTTCCTCTAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp GATAAACTGAATGAAAGGAGCTTTCCGTCCTACTTTTCATTTGTGCCAGAAATGGCCTTTAGGAGGAGGTaGGAGTGCCACCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: DKLNERSFPSYFSFVPEMAFRRR*ECHPWP
Trigger: AGGCCAAGGGTGGCACTCCAACCTCCTCCTAAAGGC...CATTTCTGGCACAAATGAAAAGTAGGACGGAAAGCTCCTTTCATTCAGTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS-3UTR CAA 90 bp AGTGATCTGGCATTTTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGGGGCCAACAGCAAGGTaGTTGAGCAAGTGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: SDLAFLRWQSTFASCGLLGPTAR*LSKCSA
Trigger: AGCAGAACACTTGCTCAACAACCTTGCTGTTGGCCC...CAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAGATCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp AGTGATCTGGCATTTTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGAGGGGTGCAGGTAGATaGCAGAGGATCTGGGATTTG +
Preference number: 5 (lower is better)
Translates to: SDLAFLRWQSTFASCGLLRGAGR*QRIWDL
Trigger: CAAATCCCAGATCCTCTGCAATCTACCTGCACCCCT...CAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAAAATGCCAGATCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp TGGGTACCTGCTACCCAAGTGATGAGCTACTGCCTTTGTTTGTTAACTGCTCTTGCATCCTGTGGGCTGTaGTCTGTAGTTCTGGCATAT +
Preference number: 5 (lower is better)
Translates to: WVPATQVMSYCLCLLTALASCGL*SVVLAY
Trigger: ATATGCCAGAACTACAGACAACAGCCCACAGGATGC...AAGAGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTGGGTAGCAGGTACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp TCCTACTTTTCATTTGTGCCAGAAATGACAACATCCCTTTCCCATCCAGCAAGAGGGCCAACAGCAAGGTaGTTGAGCAAGTGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: SYFSFVPEMTTSLSHPARGPTAR*LSKCSA
Trigger: AGCAGAACACTTGCTCAACAACCTTGCTGTTGGCCC...TCTTGCTGGATGGGAAAGGGATGTTGTCATTTCTGGCACAAATGAAAAGTAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp TGGGTACCTGCTACCCAAGTGATGAGCTACTGCCTTTGTTTGTTAACTGCTCTTGCTAGAGACCTGGTGTaGATATCCACATTCATAGGC +
Preference number: 5 (lower is better)
Translates to: WVPATQVMSYCLCLLTALARDLV*ISTFIG
Trigger: GCCTATGAATGTGGATATCAACACCAGGTCTCTAGC...AAGAGCAGTTAACAAACAAAGGCAGTAGCTCATCACTTGGGTAGCAGGTACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp TTTAAGATGGCAAAGCACTTTTGCATCCTGTGGGCTGTTGTCTGTAGTTCTGGCAAGAATGTGTTAGACTaGGGCCAACAGCAAGGTTGT +
Preference number: 5 (lower is better)
Translates to: FKMAKHFCILWAVVCSSGKNVLD*GQQQGC
Trigger: ACAACCTTGCTGTTGGCCCAAGTCTAACACATTCTT...GCCAGAACTACAGACAACAGCCCACAGGATGCAAAAGTGCTTTGCCATCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS-3UTR CAA 90 bp TCCTACTTTTCATTTGTGCCAGAAATGACAACATCCCTTTCCCATCCAGCAAGAGATGAGCTACTGCCTTaGTTTGTTAACTGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: SYFSFVPEMTTSLSHPARDELLP*FVNCSF
Trigger: GAAAGAGCAGTTAACAAACAAAGGCAGTAGCTCATC...TCTTGCTGGATGGGAAAGGGATGTTGTCATTTCTGGCACAAATGAAAAGTAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS TCA 72 bp GCGCATCAGTGCTCCTGCTGTCCTGCAGGTGGAGGCTaGGGAAAGGGGGTCCCTGGGTGCTGCCAGGCCTGT +
Preference number: 6 (lower is better)
Translates to: AHQCSCCPAGGG*GKGVPGCCQAC
Trigger: ACAGGCCTGGCAGCACCCAGGGACCCCCTTTCCTCAGCCTCCACCTGCAGGACAGCAGGAGCACTGATGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CAA 90 bp GAGGAGGGTGATCCAGGCAGGGAACCAGGCAGAGGCCAGCTGATCTaGAGCCGATGGACAACAGCTCGTGGGAGGAGCCAGCCTGCGCAG +
Preference number: 6 (lower is better)
Translates to: EEGDPGREPGRGQLI*SRWTTARGRSQPAQ
Trigger: CTGCGCAGGCTGGCTCCTCCCACGAGCTGTTGTCCATCGGCTCAAGATCAGCTGGCCTCTGCCTGGTTCCCTGCCTGGATCACCCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CCA 72 bp GCCCAGCCACATCCAGATTTGTGGGCAGGGCCACACTaGCTTCACTCAGCTGCTGTGGAGCCCCCAGGTTGC +
Preference number: 6 (lower is better)
Translates to: AQPHPDLWAGPH*LHSAAVEPPGC
Trigger: GCAACCTGGGGGCTCCACAGCAGCTGAGTGAAGCCAGTGTGGCCCTGCCCACAAATCTGGATGTGGCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CCA 72 bp AAGACCTGGGACAGGCTGTGTTTCCCATGGGTGCGCTaGGAGGAGGGTGATCCAGGCAGGGAACCAGGCAGA +
Preference number: 6 (lower is better)
Translates to: KTWDRLCFPWVR*EEGDPGREPGR
Trigger: TCTGCCTGGTTCCCTGCCTGGATCACCCTCCTCCCAGCGCACCCATGGGAAACACAGCCTGTCCCAGGTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CCA 72 bp ACAGGGACTTCCATGGGCAGGTCACAGCAGAAGAGCTaGAAGGAGTGGTATCCTGTGCCCACGGCTCAGCCC +
Preference number: 6 (lower is better)
Translates to: TGTSMGRSQQKS*KEWYPVPTAQP
Trigger: GGGCTGAGCCGTGGGCACAGGATACCACTCCTTCCAGCTCTTCTGCTGTGACCTGCCCATGGAAGTCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS TCA 72 bp TCTGGAACCAGATCTGCACCCGAGCTTCTGGGAGGTTaGTCCTGGCTGCCAGCTGGCTGCGGATGTGAACGT +
Preference number: 6 (lower is better)
Translates to: SGTRSAPELLGG*SWLPAGCGCER
Trigger: ACGTTCACATCCGCAGCCAGCTGGCAGCCAGGATCAACCTCCCAGAAGCTCGGGTGCAGATCTGGTTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS GCA 72 bp AGATTTGTGGGCAGGGCCACACTGGCTTCACTCAGCTaGTGTGGAGCCCCCAGGTTGCCAATCTTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: RFVGRATLASLS*CGAPRLPIFSC
Trigger: GCAGGAGAAGATTGGCAACCTGGGGGCTCCACAGCAGCTGAGTGAAGCCAGTGTGGCCCTGCCCACAAATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CCA 72 bp AGGTTTGGAGGCAGGGGTCCACCTTTGCCCTTTCTCTaGCTTCTGGCCCTTTCCTGTGGCTCTAGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: RFGGRGPPLPFL*LLALSCGSSQP
Trigger: AGGCTGGCTAGAGCCACAGGAAAGGGCCAGAAGCCAGAGAAAGGGCAAAGGTGGACCCCTGCCTCCAAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS CCA 72 bp TCGCTGATTCTGGAACCAGATCTGCACCCGAGCTTCTaGGAGGTTGATCCTGGCTGCCAGCTGGCTGCGGAT +
Preference number: 6 (lower is better)
Translates to: SLILEPDLHPSF*EVDPGCQLAAD
Trigger: ATCCGCAGCCAGCTGGCAGCCAGGATCAACCTCCCAGAAGCTCGGGTGCAGATCTGGTTCCAGAATCAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS TCA 72 bp GTTGCCTGCACAATCACCAGGTTAGGCCAGGATCCCTaGGGTCACCGCCCAGTGGCGAACAAAGAGAAGAGG +
Preference number: 6 (lower is better)
Translates to: VACTITRLGQDP*GHRPVANKEKR
Trigger: CCTCTTCTCTTTGTTCGCCACTGGGCGGTGACCTCAGGGATCCTGGCCTAACCTGGTGATTGTGCAGGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS GCA 72 bp CCTCACAGCACCCCAAGCTATTTCTCTCCATACCCCTaGAGAGAGCAGGGCCCACCTCAGCACACATTGAGG +
Preference number: 6 (lower is better)
Translates to: PHSTPSYFSPYP*REQGPPQHTLR
Trigger: CCTCAATGTGTGCTGAGGTGGGCCCTGCTCTCTGCAGGGGTATGGAGAGAAATAGCTTGGGGTGCTGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CCA 72 bp AGTGCCACCCTTGGCCTCAGGTGGCCAATTCAGTCCTaGGCTTTACTGCAGCTTGAGGGGTCTTCCCAGACA +
Preference number: 6 (lower is better)
Translates to: SATLGLRWPIQS*ALLQLEGSSQT
Trigger: TGTCTGGGAAGACCCCTCAAGCTGCAGTAAAGCCCAGGACTGAATTGGCCACCTGAGGCCAAGGGTGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS CCA 72 bp CTTTCCTGTGGCTCTAGCCAGCCTTTAGGAGGAGGTTaGAGTGCCACCCTTGGCCTCAGGTGGCCAATTCAG +
Preference number: 6 (lower is better)
Translates to: LSCGSSQPLGGG*SATLGLRWPIQ
Trigger: CTGAATTGGCCACCTGAGGCCAAGGGTGGCACTCCAACCTCCTCCTAAAGGCTGGCTAGAGCCACAGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS CCA 72 bp TTAGGAGGAGGTTGGAGTGCCACCCTTGGCCTCAGGTaGCCAATTCAGTCCTGGGCTTTACTGCAGCTTGAG +
Preference number: 6 (lower is better)
Translates to: LGGGWSATLGLR*PIQSWALLQLE
Trigger: CTCAAGCTGCAGTAAAGCCCAGGACTGAATTGGCCACCTGAGGCCAAGGGTGGCACTCCAACCTCCTCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS CCA 72 bp CACCTGGCCCTTCTGGTCTGTCCATATCACTCCTCCTaGCAGGCCTCTTTAGGATCGCCTCAATGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: HLALLVCPYHSS*QASLGSPQWRR
Trigger: CCTTCTCCATTGAGGCGATCCTAAAGAGGCCTGCCAGGAGGAGTGATATGGACAGACCAGAAGGGCCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CAA 90 bp CCCTTGGCCTCAGGTGGCCAATTCAGTCCTGGGCTTTACTGCAGCTaGAGGGGTCTTCCCAGACACCCGTGTTTACTTCCTTCAGTTCTG +
Preference number: 6 (lower is better)
Translates to: PLASGGQFSPGLYCS*RGLPRHPCLLPSVL
Trigger: CAGAACTGAAGGAAGTAAACACGGGTGTCTGGGAAGACCCCTCAAGCTGCAGTAAAGCCCAGGACTGAATTGGCCACCTGAGGCCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS GCA 72 bp TTGGCCTCAGGTGGCCAATTCAGTCCTGGGCTTTACTaGAGCTTGAGGGGTCTTCCCAGACACCCGTGTTTA +
Preference number: 6 (lower is better)
Translates to: LASGGQFSPGLY*SLRGLPRHPCL
Trigger: TAAACACGGGTGTCTGGGAAGACCCCTCAAGCTGCAGTAAAGCCCAGGACTGAATTGGCCACCTGAGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS TCA 72 bp CAGGTGGCCAATTCAGTCCTGGGCTTTACTGCAGCTTaGGGGGTCTTCCCAGACACCCGTGTTTACTTCCTT +
Preference number: 6 (lower is better)
Translates to: QVANSVLGFTAA*GVFPDTRVYFL
Trigger: AAGGAAGTAAACACGGGTGTCTGGGAAGACCCCTCAAGCTGCAGTAAAGCCCAGGACTGAATTGGCCACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS TCA 72 bp GGAGGTGGAAGGATGCATAGCACAGGGATGCAAGTTTaGTGGATGGGAAGACCTGGGACAGGCTGTGTTTCC +
Preference number: 6 (lower is better)
Translates to: GGGRMHSTGMQV*WMGRPGTGCVS
Trigger: GGAAACACAGCCTGTCCCAGGTCTTCCCATCCATCAAACTTGCATCCCTGTGCTATGCATCCTTCCACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS GCA 72 bp ATCTTCCAGAGAAGGGTCTTCTCGGACACAGTTGCCTaGACAATCACCAGGTTAGGCCAGGATCCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: IFQRRVFSDTVA*TITRLGQDPFS
Trigger: GCTGAAGGGATCCTGGCCTAACCTGGTGATTGTGCAGGCAACTGTGTCCGAGAAGACCCTTCTCTGGAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404699.7
CDS CAA 72 bp TCAGGTGGCCAATTCAGTCCTGGGCTTTACTGCAGCTaGAGGGGTCTTCCCAGACACCCGTGTTTACTTCCT +
Preference number: 6 (lower is better)
Translates to: SGGQFSPGLYCS*RGLPRHPCLLP
Trigger: AGGAAGTAAACACGGGTGTCTGGGAAGACCCCTCAAGCTGCAGTAAAGCCCAGGACTGAATTGGCCACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS TCA 72 bp CGCGTGGAGGTGAAGAACAGAGAGCCTCCAGTTAGATaGTCCAAACAGGATTTCGTGTCCACAGGGACTTCC +
Preference number: 6 (lower is better)
Translates to: RVEVKNREPPVR*SKQDFVSTGTS
Trigger: GGAAGTCCCTGTGGACACGAAATCCTGTTTGGATCATCTAACTGGAGGCTCTCTGTTCTTCACCTCCACGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS GCA 72 bp GTCTTCCCAGACACCCGTGTTTACTTCCTTCAGTTCTaGTGCTTCCAGACTCCAGAACGTACCTTCAGCGCA +
Preference number: 6 (lower is better)
Translates to: VFPDTRVYFLQF*CFQTPERTFSA
Trigger: TGCGCTGAAGGTACGTTCTGGAGTCTGGAAGCAGCAGAACTGAAGGAAGTAAACACGGGTGTCTGGGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS GCA 72 bp TTCAATCTTCCAGAGAAGGGTCTTCTCGGACACAGTTaGCTGCACAATCACCAGGTTAGGCCAGGATCCCTG +
Preference number: 6 (lower is better)
Translates to: FNLPEKGLLGHS*LHNHQVRPGSL
Trigger: CAGGGATCCTGGCCTAACCTGGTGATTGTGCAGGCAACTGTGTCCGAGAAGACCCTTCTCTGGAAGATTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS CCA 72 bp GAAGGATGCATAGCACAGGGATGCAAGTTTGATGGATaGGAAGACCTGGGACAGGCTGTGTTTCCCATGGGT +
Preference number: 6 (lower is better)
Translates to: EGCIAQGCKFDG*EDLGQAVFPMG
Trigger: ACCCATGGGAAACACAGCCTGTCCCAGGTCTTCCCATCCATCAAACTTGCATCCCTGTGCTATGCATCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CAA 90 bp CTGGAAGGAGTGGTATCCTGTGCCCACGGCTCAGCCCTTACCAGTTaGACATCAAAGGAGTCACCATGGCTGAATTGGGGTTCAATCTTC +
Preference number: 6 (lower is better)
Translates to: LEGVVSCAHGSALTS*TSKESPWLNWGSIF
Trigger: GAAGATTGAACCCCAATTCAGCCATGGTGACTCCTTTGATGTCAAACTGGTAAGGGCTGAGCCGTGGGCACAGGATACCACTCCTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS GCA 72 bp TTCCCAGACACCCGTGTTTACTTCCTTCAGTTCTGCTaGTTCCAGACTCCAGAACGTACCTTCAGCGCATCA +
Preference number: 6 (lower is better)
Translates to: FPDTRVYFLQFC*FQTPERTFSAS
Trigger: TGATGCGCTGAAGGTACGTTCTGGAGTCTGGAAGCAGCAGAACTGAAGGAAGTAAACACGGGTGTCTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308700.6
CDS GCA 72 bp TTCAATCTTCCAGAGAAGGGTCTTCTCGGACACAGTTaGCTGCACAATCACCAGGTTAGGCCAGGATCCCTT +
Preference number: 6 (lower is better)
Translates to: FNLPEKGLLGHS*LHNHQVRPGSL
Trigger: AAGGGATCCTGGCCTAACCTGGTGATTGTGCAGGCAACTGTGTCCGAGAAGACCCTTCTCTGGAAGATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404699.7
CDS CAA 90 bp CTCAGCCCTTACCAGTTTGACATCAAAGGAGTCACCATGGCTGAATaGGGGTTCAATCTTCCAGAGAAGGGTCTTCTCGGACACAGTTGC +
Preference number: 6 (lower is better)
Translates to: LSPYQFDIKGVTMAE*GFNLPEKGLLGHSC
Trigger: GCAACTGTGTCCGAGAAGACCCTTCTCTGGAAGATTGAACCCCAATTCAGCCATGGTGACTCCTTTGATGTCAAACTGGTAAGGGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CCA 72 bp ACCAGTTTGACATCAAAGGAGTCACCATGGCTGAATTaGGGTTCAATCTTCCAGAGAAGGGTCTTCTCGGAC +
Preference number: 6 (lower is better)
Translates to: TSLTSKESPWLN*GSIFQRRVFSD
Trigger: GTCCGAGAAGACCCTTCTCTGGAAGATTGAACCCCAATTCAGCCATGGTGACTCCTTTGATGTCAAACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CCA 72 bp TCAGCCCTTACCAGTTTGACATCAAAGGAGTCACCATaGCTGAATTGGGGTTCAATCTTCCAGAGAAGGGTC +
Preference number: 6 (lower is better)
Translates to: SALTSLTSKESP*LNWGSIFQRRV
Trigger: GACCCTTCTCTGGAAGATTGAACCCCAATTCAGCCATGGTGACTCCTTTGATGTCAAACTGGTAAGGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7
CDS CAA 72 bp TACCAGTTTGACATCAAAGGAGTCACCATGGCTGAATaGGGGTTCAATCTTCCAGAGAAGGGTCTTCTCGGA +
Preference number: 6 (lower is better)
Translates to: YQFDIKGVTMAE*GFNLPEKGLLG
Trigger: TCCGAGAAGACCCTTCTCTGGAAGATTGAACCCCAATTCAGCCATGGTGACTCCTTTGATGTCAAACTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308700.6
ENST00000404699.7