Pregenerated sensors for ISG15 (Homo sapiens)
Ensembl gene IDs: ENSG00000187608Ensembl transcript IDs: ENST00000624652.1, ENST00000624697.4, ENST00000649529.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGTCCACCACCAGCAGGACCGTGCTGCCGGGGCCCAGGCCCTGGCTaGCAAGGGGGACCCTGTCCTGCAGCGCCACACCGCTCGGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: CPPPAGPCCRGPGPG*QGGPCPAAPHRSGG Trigger: TCCACCCGAGCGGTGTGGCGCTGCAGGACAGGGTCCCCCTTGCCAGCCAGGGCCTGGGCCCCGGCAGCACGGTCCTGCTGGTGGTGGACA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS CCA 90 bp | TGGCTGGCAAGGGGGACCCTGTCCTGCAGCGCCACACCGCTCGGGTaGACAGCCAGACGCTGCTGGAAGGCGTGCACGCCGATCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: WLARGTLSCSATPLG*TARRCWKACTPIFW Trigger: CCAGAAGATCGGCGTGCACGCCTTCCAGCAGCGTCTGGCTGTCCACCCGAGCGGTGTGGCGCTGCAGGACAGGGTCCCCCTTGCCAGCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 90 bp | GGATGCTCAGAGGTTCGTCGCATTTGTCCACCACCAGCAGGACCGTaGTGCCGGGGCCCAGGCCCTGGCTGGCAAGGGGGACCCTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: GCSEVRRICPPPAGP*CRGPGPGWQGGPCP Trigger: AGGACAGGGTCCCCCTTGCCAGCCAGGGCCTGGGCCCCGGCAGCACGGTCCTGCTGGTGGTGGACAAATGCGACGAACCTCTGAGCATCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 90 bp | ACCCTGTCCTGCAGCGCCACACCGCTCGGGTGGACAGCCAGACGCTaGTGGAAGGCGTGCACGCCGATCTTCTGGGTGATCTGCGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: TLSCSATPLGWTARR*WKACTPIFWVICAF Trigger: GAAGGCGCAGATCACCCAGAAGATCGGCGTGCACGCCTTCCAGCAGCGTCTGGCTGTCCACCCGAGCGGTGTGGCGCTGCAGGACAGGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS CCA 90 bp | CTGTCCTGCAGCGCCACACCGCTCGGGTGGACAGCCAGACGCTGCTaGAAGGCGTGCACGCCGATCTTCTGGGTGATCTGCGCCTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: LSCSATPLGWTARRC*KACTPIFWVICAFS Trigger: GCTGAAGGCGCAGATCACCCAGAAGATCGGCGTGCACGCCTTCCAGCAGCGTCTGGCTGTCCACCCGAGCGGTGTGGCGCTGCAGGACAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 90 bp | AGCGCCACACCGCTCGGGTGGACAGCCAGACGCTGCTGGAAGGCGTaGACGCCGATCTTCTGGGTGATCTGCGCCTTCAGCTCTGACACC | + |
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Preference number: 5 (lower is better) Translates to: SATPLGWTARRCWKA*TPIFWVICAFSSDT Trigger: GGTGTCAGAGCTGAAGGCGCAGATCACCCAGAAGATCGGCGTGCACGCCTTCCAGCAGCGTCTGGCTGTCCACCCGAGCGGTGTGGCGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 90 bp | TCCTCCAGGGGCTTCCCCTCGAAGGTCAGCCAGAACAGGTCGTCCTaGACACCCTCCAGCCCGCTCACTTGCTGCTTCAGGTGGGCCACG | + |
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Preference number: 5 (lower is better) Translates to: SSRGFPSKVSQNRSS*TPSSPLTCCFRWAT Trigger: CGTGGCCCACCTGAAGCAGCAAGTGAGCGGGCTGGAGGGTGTGCAGGACGACCTGTTCTGGCTGACCTTCGAGGGGAAGCCCCTGGAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS CCA 90 bp | TACAACAGCCTTTATTTCCGGCCCTTGATCCTGCTCGGATGCTGGTaGAGGCCCTTAGCTCCGCCCGCCAGGCTCTGTGCCGCCTCCCCG | + |
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Preference number: 5 (lower is better) Translates to: YNSLYFRPLILLGCW*RPLAPPARLCAASP Trigger: CGGGGAGGCGGCACAGAGCCTGGCGGGCGGAGCTAAGGGCCTCCACCAGCATCCGAGCAGGATCAAGGGCCGGAAATAAAGGCTGTTGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000624697.4 ENST00000649529.1 |
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| CDS TCA 90 bp | GGACAGCCAGACGCTGCTGGAAGGCGTGCACGCCGATCTTCTGGGTaGTCTGCGCCTTCAGCTCTGACACCGACATGGAGCTGCTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: GQPDAAGRRARRSSG*SAPSALTPTWSCSG Trigger: CCCTGAGCAGCTCCATGTCGGTGTCAGAGCTGAAGGCGCAGATCACCCAGAAGATCGGCGTGCACGCCTTCCAGCAGCGTCTGGCTGTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 90 bp | GCCAGACGCTGCTGGAAGGCGTGCACGCCGATCTTCTGGGTGATCTaGGCCTTCAGCTCTGACACCGACATGGAGCTGCTCAGGGACACC | + |
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Preference number: 5 (lower is better) Translates to: ARRCWKACTPIFWVI*AFSSDTDMELLRDT Trigger: GGTGTCCCTGAGCAGCTCCATGTCGGTGTCAGAGCTGAAGGCGCAGATCACCCAGAAGATCGGCGTGCACGCCTTCCAGCAGCGTCTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS CCA 90 bp | GGGTGGACAGCCAGACGCTGCTGGAAGGCGTGCACGCCGATCTTCTaGGTGATCTGCGCCTTCAGCTCTGACACCGACATGGAGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: GWTARRCWKACTPIF*VICAFSSDTDMELL Trigger: GAGCAGCTCCATGTCGGTGTCAGAGCTGAAGGCGCAGATCACCCAGAAGATCGGCGTGCACGCCTTCCAGCAGCGTCTGGCTGTCCACCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 90 bp | TCAGGTGGGCCACGGTCTGCGTCAGCCGTACCTCGTAGGTGCTGCTaGGGCCCTTGTTATTCCTCACCAGGATGCTCAGAGGTTCGTCGC | + |
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Preference number: 5 (lower is better) Translates to: SGGPRSASAVPRRCC*GPCYSSPGCSEVRR Trigger: GCGACGAACCTCTGAGCATCCTGGTGAGGAATAACAAGGGCCGCAGCAGCACCTACGAGGTACGGCTGACGCAGACCGTGGCCCACCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS CCA 90 bp | CTTTACAACAGCCTTTATTTCCGGCCCTTGATCCTGCTCGGATGCTaGTGGAGGCCCTTAGCTCCGCCCGCCAGGCTCTGTGCCGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LYNSLYFRPLILLGC*WRPLAPPARLCAAS Trigger: GGAGGCGGCACAGAGCCTGGCGGGCGGAGCTAAGGGCCTCCACCAGCATCCGAGCAGGATCAAGGGCCGGAAATAAAGGCTGTTGTAAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 90 bp | GCTTCAGGTGGGCCACGGTCTGCGTCAGCCGTACCTCGTAGGTGCTaGTGCGGCCCTTGTTATTCCTCACCAGGATGCTCAGAGGTTCGT | + |
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Preference number: 5 (lower is better) Translates to: ASGGPRSASAVPRRC*CGPCYSSPGCSEVR Trigger: ACGAACCTCTGAGCATCCTGGTGAGGAATAACAAGGGCCGCAGCAGCACCTACGAGGTACGGCTGACGCAGACCGTGGCCCACCTGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 90 bp | GCTGCTTCAGGTGGGCCACGGTCTGCGTCAGCCGTACCTCGTAGGTaGTGCTGCGGCCCTTGTTATTCCTCACCAGGATGCTCAGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: AASGGPRSASAVPRR*CCGPCYSSPGCSEV Trigger: AACCTCTGAGCATCCTGGTGAGGAATAACAAGGGCCGCAGCAGCACCTACGAGGTACGGCTGACGCAGACCGTGGCCCACCTGAAGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 90 bp | TCTCTTTACAACAGCCTTTATTTCCGGCCCTTGATCCTGCTCGGATaGTGGTGGAGGCCCTTAGCTCCGCCCGCCAGGCTCTGTGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: SLYNSLYFRPLILLG*WWRPLAPPARLCAA Trigger: GGCGGCACAGAGCCTGGCGGGCGGAGCTAAGGGCCTCCACCAGCATCCGAGCAGGATCAAGGGCCGGAAATAAAGGCTGTTGTAAAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000624697.4 ENST00000649529.1 |
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| CDS TCA 90 bp | GAAGGCGTGCACGCCGATCTTCTGGGTGATCTGCGCCTTCAGCTCTaGCACCGACATGGAGCTGCTCAGGGACACCTGGAATTCGTTGCC | + |
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Preference number: 5 (lower is better) Translates to: EGVHADLLGDLRLQL*HRHGAAQGHLEFVA Trigger: GGCAACGAATTCCAGGTGTCCCTGAGCAGCTCCATGTCGGTGTCAGAGCTGAAGGCGCAGATCACCCAGAAGATCGGCGTGCACGCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 90 bp | CGATTCCTAATTCGGTTCTCTTACGTGACTGCTGAGTCTGCCATCTaGCTCCTGCCCGGATTGAAAGCCCGGGAGGGTCTCCACACCCGG | + |
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Preference number: 5 (lower is better) Translates to: RFLIRFSYVTAESAI*LLPGLKAREGLHTR Trigger: CCGGGTGTGGAGACCCTCCCGGGCTTTCAATCCGGGCAGGAGGCAGATGGCAGACTCAGCAGTCACGTAAGAGAACCGAATTAGGAATCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624697.4 |
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| CDS GCA 90 bp | GTACCTCGTAGGTGCTGCTGCGGCCCTTGTTATTCCTCACCAGGATaGTCAGAGGTTCGTCGCATTTGTCCACCACCAGCAGGACCGTGC | + |
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Preference number: 5 (lower is better) Translates to: VPRRCCCGPCYSSPG*SEVRRICPPPAGPC Trigger: GCACGGTCCTGCTGGTGGTGGACAAATGCGACGAACCTCTGAGCATCCTGGTGAGGAATAACAAGGGCCGCAGCAGCACCTACGAGGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS CCA 72 bp | CCAGCAGGACCGTGCTGCCGGGGCCCAGGCCCTGGCTaGCAAGGGGGACCCTGTCCTGCAGCGCCACACCGC | + |
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Preference number: 6 (lower is better) Translates to: PAGPCCRGPGPG*QGGPCPAAPHR Trigger: GCGGTGTGGCGCTGCAGGACAGGGTCCCCCTTGCCAGCCAGGGCCTGGGCCCCGGCAGCACGGTCCTGCTGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 72 bp | GGGCCCAGGCCCTGGCTGGCAAGGGGGACCCTGTCCTaGAGCGCCACACCGCTCGGGTGGACAGCCAGACGC | + |
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Preference number: 6 (lower is better) Translates to: GPRPWLARGTLS*SATPLGWTARR Trigger: GCGTCTGGCTGTCCACCCGAGCGGTGTGGCGCTGCAGGACAGGGTCCCCCTTGCCAGCCAGGGCCTGGGCCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS CCA 72 bp | AGGGGGACCCTGTCCTGCAGCGCCACACCGCTCGGGTaGACAGCCAGACGCTGCTGGAAGGCGTGCACGCCG | + |
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Preference number: 6 (lower is better) Translates to: RGTLSCSATPLG*TARRCWKACTP Trigger: CGGCGTGCACGCCTTCCAGCAGCGTCTGGCTGTCCACCCGAGCGGTGTGGCGCTGCAGGACAGGGTCCCCCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 72 bp | CCGCTCGGGTGGACAGCCAGACGCTGCTGGAAGGCGTaGACGCCGATCTTCTGGGTGATCTGCGCCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: PLGWTARRCWKA*TPIFWVICAFS Trigger: GCTGAAGGCGCAGATCACCCAGAAGATCGGCGTGCACGCCTTCCAGCAGCGTCTGGCTGTCCACCCGAGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 72 bp | TGCAGCGCCACACCGCTCGGGTGGACAGCCAGACGCTaGTGGAAGGCGTGCACGCCGATCTTCTGGGTGATC | + |
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Preference number: 6 (lower is better) Translates to: CSATPLGWTARR*WKACTPIFWVI Trigger: GATCACCCAGAAGATCGGCGTGCACGCCTTCCAGCAGCGTCTGGCTGTCCACCCGAGCGGTGTGGCGCTGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 72 bp | AGGTCGTCCTGCACACCCTCCAGCCCGCTCACTTGCTaGTTCAGGTGGGCCACGGTCTGCGTCAGCCGTACC | + |
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Preference number: 6 (lower is better) Translates to: RSSCTPSSPLTC*FRWATVCVSRT Trigger: GGTACGGCTGACGCAGACCGTGGCCCACCTGAAGCAGCAAGTGAGCGGGCTGGAGGGTGTGCAGGACGACCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS CCA 72 bp | AGCGCCACACCGCTCGGGTGGACAGCCAGACGCTGCTaGAAGGCGTGCACGCCGATCTTCTGGGTGATCTGC | + |
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Preference number: 6 (lower is better) Translates to: SATPLGWTARRC*KACTPIFWVIC Trigger: GCAGATCACCCAGAAGATCGGCGTGCACGCCTTCCAGCAGCGTCTGGCTGTCCACCCGAGCGGTGTGGCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS CAA 72 bp | GAACAGGTCGTCCTGCACACCCTCCAGCCCGCTCACTaGCTGCTTCAGGTGGGCCACGGTCTGCGTCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: EQVVLHTLQPAH*LLQVGHGLRQP Trigger: CGGCTGACGCAGACCGTGGCCCACCTGAAGCAGCAAGTGAGCGGGCTGGAGGGTGTGCAGGACGACCTGTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS CAA 72 bp | CGCAGGCGCAGATTCATGAACACGGTGCTCAGGGGCTaGAGGCCGTACTCCCCCAGCGGGAGCTGGTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: RRRRFMNTVLRG*RPYSPSGSWSS Trigger: GGAGGACCAGCTCCCGCTGGGGGAGTACGGCCTCAAGCCCCTGAGCACCGTGTTCATGAATCTGCGCCTGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000624697.4 ENST00000649529.1 |
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| CDS CAA 90 bp | AAGCGATTCGTGACTGCTGAGTCTGCCATCTGCCTCCTGCCCGGATaGAAAGCCCGGGAGGGTCTCCACACCCGGGCCCAGGCCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: KRFVTAESAICLLPG*KAREGLHTRAQARL Trigger: GAGCCTGGCCTGGGCCCGGGTGTGGAGACCCTCCCGGGCTTTCAATCCGGGCAGGAGGCAGATGGCAGACTCAGCAGTCACGAATCGCTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624652.1 |
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| CDS GCA 72 bp | AACAGGTCGTCCTGCACACCCTCCAGCCCGCTCACTTaGTGCTTCAGGTGGGCCACGGTCTGCGTCAGCCGT | + |
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Preference number: 6 (lower is better) Translates to: NRSSCTPSSPLT*CFRWATVCVSR Trigger: ACGGCTGACGCAGACCGTGGCCCACCTGAAGCAGCAAGTGAGCGGGCTGGAGGGTGTGCAGGACGACCTGTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS CAA 90 bp | TTCTCTTACGTGACTGCTGAGTCTGCCATCTGCCTCCTGCCCGGATaGAAAGCCCGGGAGGGTCTCCACACCCGGGCCCAGGCCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: FSYVTAESAICLLPG*KAREGLHTRAQARL Trigger: GAGCCTGGCCTGGGCCCGGGTGTGGAGACCCTCCCGGGCTTTCAATCCGGGCAGGAGGCAGATGGCAGACTCAGCAGTCACGTAAGAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624697.4 |
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| CDS CAA 90 bp | CGGCCCTTGTTATTCCTCACCAGGATGCTCAGAGGTTCGTCGCATTaGTCCACCACCAGCAGGACCGTGCTGCCGGGGCCCAGGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RPLLFLTRMLRGSSH*STTSRTVLPGPRPW Trigger: CCAGGGCCTGGGCCCCGGCAGCACGGTCCTGCTGGTGGTGGACAAATGCGACGAACCTCTGAGCATCCTGGTGAGGAATAACAAGGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS CAA 90 bp | GGTCAGCCAGAACAGGTCGTCCTGCACACCCTCCAGCCCGCTCACTaGCTGCTTCAGGTGGGCCACGGTCTGCGTCAGCCGTACCTCGTA | + |
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Preference number: 6 (lower is better) Translates to: GQPEQVVLHTLQPAH*LLQVGHGLRQPYLV Trigger: TACGAGGTACGGCTGACGCAGACCGTGGCCCACCTGAAGCAGCAAGTGAGCGGGCTGGAGGGTGTGCAGGACGACCTGTTCTGGCTGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 72 bp | GGTGGGCCACGGTCTGCGTCAGCCGTACCTCGTAGGTaGTGCTGCGGCCCTTGTTATTCCTCACCAGGATGC | + |
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Preference number: 6 (lower is better) Translates to: GGPRSASAVPRR*CCGPCYSSPGC Trigger: GCATCCTGGTGAGGAATAACAAGGGCCGCAGCAGCACCTACGAGGTACGGCTGACGCAGACCGTGGCCCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS TCA 72 bp | GACGCTGCTGGAAGGCGTGCACGCCGATCTTCTGGGTaGTCTGCGCCTTCAGCTCTGACACCGACATGGAGC | + |
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Preference number: 6 (lower is better) Translates to: DAAGRRARRSSG*SAPSALTPTWS Trigger: GCTCCATGTCGGTGTCAGAGCTGAAGGCGCAGATCACCCAGAAGATCGGCGTGCACGCCTTCCAGCAGCGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 72 bp | GGGCCACGGTCTGCGTCAGCCGTACCTCGTAGGTGCTaGTGCGGCCCTTGTTATTCCTCACCAGGATGCTCA | + |
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Preference number: 6 (lower is better) Translates to: GPRSASAVPRRC*CGPCYSSPGCS Trigger: TGAGCATCCTGGTGAGGAATAACAAGGGCCGCAGCAGCACCTACGAGGTACGGCTGACGCAGACCGTGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 72 bp | AACAGCCTTTATTTCCGGCCCTTGATCCTGCTCGGATaGTGGTGGAGGCCCTTAGCTCCGCCCGCCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: NSLYFRPLILLG*WWRPLAPPARL Trigger: GAGCCTGGCGGGCGGAGCTAAGGGCCTCCACCAGCATCCGAGCAGGATCAAGGGCCGGAAATAAAGGCTGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000624697.4 ENST00000649529.1 |
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| CDS CCA 72 bp | GCCAGACGCTGCTGGAAGGCGTGCACGCCGATCTTCTaGGTGATCTGCGCCTTCAGCTCTGACACCGACATG | + |
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Preference number: 6 (lower is better) Translates to: ARRCWKACTPIF*VICAFSSDTDM Trigger: CATGTCGGTGTCAGAGCTGAAGGCGCAGATCACCCAGAAGATCGGCGTGCACGCCTTCCAGCAGCGTCTGGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 72 bp | CCACGGTCTGCGTCAGCCGTACCTCGTAGGTGCTGCTaGGGCCCTTGTTATTCCTCACCAGGATGCTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: PRSASAVPRRCC*GPCYSSPGCSE Trigger: CTCTGAGCATCCTGGTGAGGAATAACAAGGGCCGCAGCAGCACCTACGAGGTACGGCTGACGCAGACCGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS CAA 72 bp | TTATTCCTCACCAGGATGCTCAGAGGTTCGTCGCATTaGTCCACCACCAGCAGGACCGTGCTGCCGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LFLTRMLRGSSH*STTSRTVLPGP Trigger: GGGCCCCGGCAGCACGGTCCTGCTGGTGGTGGACAAATGCGACGAACCTCTGAGCATCCTGGTGAGGAATAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS TCA 72 bp | CACGCCGATCTTCTGGGTGATCTGCGCCTTCAGCTCTaGCACCGACATGGAGCTGCTCAGGGACACCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: HADLLGDLRLQL*HRHGAAQGHLE Trigger: TTCCAGGTGTCCCTGAGCAGCTCCATGTCGGTGTCAGAGCTGAAGGCGCAGATCACCCAGAAGATCGGCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS CCA 72 bp | AGCTCTGACACCGACATGGAGCTGCTCAGGGACACCTaGAATTCGTTGCCCGCCAGCATCTTCACCGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSDTDMELLRDT*NSLPASIFTVR Trigger: CCTGACGGTGAAGATGCTGGCGGGCAACGAATTCCAGGTGTCCCTGAGCAGCTCCATGTCGGTGTCAGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 72 bp | ATTCGGTTCTCTTACGTGACTGCTGAGTCTGCCATCTaGCTCCTGCCCGGATTGAAAGCCCGGGAGGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: IRFSYVTAESAI*LLPGLKAREGL Trigger: GAGACCCTCCCGGGCTTTCAATCCGGGCAGGAGGCAGATGGCAGACTCAGCAGTCACGTAAGAGAACCGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624697.4 |
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| CDS GCA 72 bp | AGGTGCTGCTGCGGCCCTTGTTATTCCTCACCAGGATaGTCAGAGGTTCGTCGCATTTGTCCACCACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RCCCGPCYSSPG*SEVRRICPPPA Trigger: TGCTGGTGGTGGACAAATGCGACGAACCTCTGAGCATCCTGGTGAGGAATAACAAGGGCCGCAGCAGCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000624652.1 ENST00000624697.4 ENST00000649529.1 |
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| CDS GCA 72 bp | AGAATTAAGCGATTCGTGACTGCTGAGTCTGCCATCTaGCTCCTGCCCGGATTGAAAGCCCGGGAGGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: RIKRFVTAESAI*LLPGLKAREGL Trigger: GAGACCCTCCCGGGCTTTCAATCCGGGCAGGAGGCAGATGGCAGACTCAGCAGTCACGAATCGCTTAATTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624652.1 |
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