RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IRS4 (Homo sapiens)

Ensembl gene IDs: ENSG00000133124

Ensembl transcript IDs: ENST00000372129.4, ENST00000564206.2

Found 784 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAACATCTGGCGAAGCCCTCTATGGGCCCTGCAGGACTCCCACAGTaGCCCTCACCTTTTCAGCCAGAGAGAGACCAGGAAAGGGCATGT +
Preference number: 1 (lower is better)
Translates to: QHLAKPSMGPAGLPQ*PSPFQPERDQERAC
Trigger: ACATGCCCTTTCCTGGTCTCTCTCTGGCTGAAAAGGTGAGGGCCACTGTGGGAGTCCTGCAGGGCCCATAGAGGGCTTCGCCAGATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 90 bp GAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATaGGCCCTGCAGGACTCCCACAGTGGCCCTCACCTTTTCAGCCAG +
Preference number: 1 (lower is better)
Translates to: EGCVLGVINIWRSPL*ALQDSHSGPHLFSQ
Trigger: CTGGCTGAAAAGGTGAGGGCCACTGTGGGAGTCCTGCAGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 90 bp AGGTTGCCTCTGCAAGCTAAGTGCAAGAAGGCTGTGTACTGGGAGTaGTCAACATCTGGCGAAGCCCTCTATGGGCCCTGCAGGACTCCC +
Preference number: 1 (lower is better)
Translates to: RLPLQAKCKKAVYWE*STSGEALYGPCRTP
Trigger: GGGAGTCCTGCAGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCTTGCACTTAGCTTGCAGAGGCAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 90 bp CAGCTGCTTCTGTGCCAAGTGACAGTAGGGCAGGCAGCACAGCCTTaGATCTGTACAACAAGGATCCCTACAAGGAAGGTTGCCTCTGCA +
Preference number: 1 (lower is better)
Translates to: QLLLCQVTVGQAAQP*ICTTRIPTRKVASA
Trigger: TGCAGAGGCAACCTTCCTTGTAGGGATCCTTGTTGTACAGATCCAAGGCTGTGCTGCCTGCCCTACTGTCACTTGGCACAGAAGCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR GCA 90 bp GGCCCTCACCTTTTCAGCCAGAGAGAGACCAGGAAAGGGCATGTTTaGCTGAATTCAAGGGCACAAGTTTGGCAAAGGGCACATGAGGGT +
Preference number: 1 (lower is better)
Translates to: GPHLFSQRETRKGHV*LNSRAQVWQRAHEG
Trigger: ACCCTCATGTGCCCTTTGCCAAACTTGTGCCCTTGAATTCAGGCAAACATGCCCTTTCCTGGTCTCTCTCTGGCTGAAAAGGTGAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 90 bp TACAGAGGAGACTGCCTGGGCATGGACATGGTTAATCAACTCTGCTaGCTGCCTGTGAGGAATATCAGCTGGGCAAAGACACAAGGGCAG +
Preference number: 1 (lower is better)
Translates to: YRGDCLGMDMVNQLC*LPVRNISWAKTQGQ
Trigger: CTGCCCTTGTGTCTTTGCCCAGCTGATATTCCTCACAGGCAGCCAGCAGAGTTGATTAACCATGTCCATGCCCAGGCAGTCTCCTCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 90 bp GCAAAGACACAAGGGCAGTTATTCTTCTTGCCCCCAGGCTGTCACTaGCATTTCTGGTGGACAGCATCTTTGCACGTGCGTGCACTGTTC +
Preference number: 1 (lower is better)
Translates to: AKTQGQLFFLPPGCH*HFWWTASLHVRALF
Trigger: GAACAGTGCACGCACGTGCAAAGATGCTGTCCACCAGAAATGTCAGTGACAGCCTGGGGGCAAGAAGAATAACTGCCCTTGTGTCTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR GCA 90 bp TGTAAACCCCCATCTCCTCAAAGGTCAGCTCAATCGTTTTACACCTaGCCTTTGTTAGCAGGCCCTGGGCCACTTATGCATGTGCATTCC +
Preference number: 1 (lower is better)
Translates to: CKPPSPQRSAQSFYT*PLLAGPGPLMHVHS
Trigger: GGAATGCACATGCATAAGTGGCCCAGGGCCTGCTAACAAAGGGCAGGTGTAAAACGATTGAGCTGACCTTTGAGGAGATGGGGGTTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 90 bp ACTATGGTAAAAGCTGCAGCAACAATAAGGACTTCATCATGGAGGTaGGTGGGGGCACAGGACTCTGAGTGCGAGGACAAGGTTGGTAAG +
Preference number: 1 (lower is better)
Translates to: TMVKAAATIRTSSWR*VGAQDSECEDKVGK
Trigger: CTTACCAACCTTGTCCTCGCACTCAGAGTCCTGTGCCCCCACCCACCTCCATGATGAAGTCCTTATTGTTGCTGCAGCTTTTACCATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 90 bp AGGGAAACTATGGTAAAAGCTGCAGCAACAATAAGGACTTCATCATaGAGGTGGGTGGGGGCACAGGACTCTGAGTGCGAGGACAAGGTT +
Preference number: 1 (lower is better)
Translates to: RETMVKAAATIRTSS*RWVGAQDSECEDKV
Trigger: AACCTTGTCCTCGCACTCAGAGTCCTGTGCCCCCACCCACCTCCATGATGAAGTCCTTATTGTTGCTGCAGCTTTTACCATAGTTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 90 bp GACATGGTTAATCAACTCTGCTGGCTGCCTGTGAGGAATATCAGCTaGGCAAAGACACAAGGGCAGTTATTCTTCTTGCCCCCAGGCTGT +
Preference number: 1 (lower is better)
Translates to: DMVNQLCWLPVRNIS*AKTQGQLFFLPPGC
Trigger: ACAGCCTGGGGGCAAGAAGAATAACTGCCCTTGTGTCTTTGCCCAGCTGATATTCCTCACAGGCAGCCAGCAGAGTTGATTAACCATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 90 bp CTCACCTTTTCAGCCAGAGAGAGACCAGGAAAGGGCATGTTTGCCTaGATTCAAGGGCACAAGTTTGGCAAAGGGCACATGAGGGTAAGA +
Preference number: 1 (lower is better)
Translates to: LTFSARERPGKGMFA*IQGHKFGKGHMRVR
Trigger: TCTTACCCTCATGTGCCCTTTGCCAAACTTGTGCCCTTGAATTCAGGCAAACATGCCCTTTCCTGGTCTCTCTCTGGCTGAAAAGGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 90 bp ATTGTGTCCCCCATACTCAACCAGTTGGAAGAGTCGGAGGCAGGGTaGCAGCCGAAGGGAAACTATGGTAAAAGCTGCAGCAACAATAAG +
Preference number: 1 (lower is better)
Translates to: IVSPILNQLEESEAG*QPKGNYGKSCSNNK
Trigger: CTTATTGTTGCTGCAGCTTTTACCATAGTTTCCCTTCGGCTGTCACCCTGCCTCCGACTCTTCCAACTGGTTGAGTATGGGGGACACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 90 bp ACTGCCTGGGCATGGACATGGTTAATCAACTCTGCTGGCTGCCTGTaGGGAATATCAGCTGGGCAAAGACACAAGGGCAGTTATTCTTCT +
Preference number: 1 (lower is better)
Translates to: TAWAWTWLINSAGCL*GISAGQRHKGSYSS
Trigger: AGAAGAATAACTGCCCTTGTGTCTTTGCCCAGCTGATATTCCTCACAGGCAGCCAGCAGAGTTGATTAACCATGTCCATGCCCAGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR GCA 90 bp AGCACAGCCTTGGATCTGTACAACAAGGATCCCTACAAGGAAGGTTaGCTCTGCAAGCTAAGTGCAAGAAGGCTGTGTACTGGGAGTGAT +
Preference number: 1 (lower is better)
Translates to: STALDLYNKDPYKEG*LCKLSARRLCTGSD
Trigger: ATCACTCCCAGTACACAGCCTTCTTGCACTTAGCTTGCAGAGGCAACCTTCCTTGTAGGGATCCTTGTTGTACAGATCCAAGGCTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 90 bp GGACAGCATCTTTGCACGTGCGTGCACTGTTCTACTTTCTTCCAGTaGAGCCCAAGAGTGAGCCAGGCATTGTGCAGAGAAACAGATTTT +
Preference number: 1 (lower is better)
Translates to: GQHLCTCVHCSTFFQ*SPRVSQALCRETDF
Trigger: AAAATCTGTTTCTCTGCACAATGCCTGGCTCACTCTTGGGCTCCACTGGAAGAAAGTAGAACAGTGCACGCACGTGCAAAGATGCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 90 bp AGCTTGTTAGGTGACTGTTGTGATCAGTGCCCGACTTGTTCTGCCTaGTCAAGCACAGTGGGCAGAGATCCAATCACAAAAGCATTCCAC +
Preference number: 1 (lower is better)
Translates to: SLLGDCCDQCPTCSA*SSTVGRDPITKAFH
Trigger: GTGGAATGCTTTTGTGATTGGATCTCTGCCCACTGTGCTTGATCAGGCAGAACAAGTCGGGCACTGATCACAACAGTCACCTAACAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR GCA 90 bp GCCTTGGATCTGTACAACAAGGATCCCTACAAGGAAGGTTGCCTCTaGAAGCTAAGTGCAAGAAGGCTGTGTACTGGGAGTGATCAACAT +
Preference number: 1 (lower is better)
Translates to: ALDLYNKDPYKEGCL*KLSARRLCTGSDQH
Trigger: ATGTTGATCACTCCCAGTACACAGCCTTCTTGCACTTAGCTTGCAGAGGCAACCTTCCTTGTAGGGATCCTTGTTGTACAGATCCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 90 bp GAGACCAGGAAAGGGCATGTTTGCCTGAATTCAAGGGCACAAGTTTaGCAAAGGGCACATGAGGGTAAGACTCACAGAACACAACCAATG +
Preference number: 1 (lower is better)
Translates to: ETRKGHVCLNSRAQV*QRAHEGKTHRTQPM
Trigger: CATTGGTTGTGTTCTGTGAGTCTTACCCTCATGTGCCCTTTGCCAAACTTGTGCCCTTGAATTCAGGCAAACATGCCCTTTCCTGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 90 bp GATAAAGTTGATGCCCTAGCAGTGACCAGTAACTGGAACAATGACTaGTCTCATAGCCACGTCCTCTCCTCAGCACAATTTACAAGAGGG +
Preference number: 1 (lower is better)
Translates to: DKVDALAVTSNWNND*SHSHVLSSAQFTRG
Trigger: CCCTCTTGTAAATTGTGCTGAGGAGAGGACGTGGCTATGAGATCAGTCATTGTTCCAGTTACTGGTCACTGCTAGGGCATCAACTTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR CCA 90 bp ATTTTCATGGTAGGTCAGCTTCTCCACTACTTCCCAACACACACATaGGCCACTTCACTCTGCTGCCTAGTTACTGCCAACTTAAAGAAT +
Preference number: 1 (lower is better)
Translates to: IFMVGQLLHYFPTHT*ATSLCCLVTANLKN
Trigger: ATTCTTTAAGTTGGCAGTAACTAGGCAGCAGAGTGAAGTGGCCCATGTGTGTGTTGGGAAGTAGTGGAGAAGCTGACCTACCATGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 90 bp TTTGTTAGCAGGCCCTGGGCCACTTATGCATGTGCATTCCAGTCTTaGGTATCTGGATACAAACTCTATGGAGATCAGCTACAGGATTTT +
Preference number: 1 (lower is better)
Translates to: FVSRPWATYACAFQS*VSGYKLYGDQLQDF
Trigger: AAAATCCTGTAGCTGATCTCCATAGAGTTTGTATCCAGATACTCAAGACTGGAATGCACATGCATAAGTGGCCCAGGGCCTGCTAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 90 bp AGGTGTCATGTGTTGGGTGGAGTGCTGGACTTGAAATCAGATGTATaGGTTAGATTTTCAGCTCTGCCACTTACCTTTTTGATCTTGGGA +
Preference number: 1 (lower is better)
Translates to: RCHVLGGVLDLKSDV*VRFSALPLTFLILG
Trigger: TCCCAAGATCAAAAAGGTAAGTGGCAGAGCTGAAAATCTAACTCATACATCTGATTTCAAGTCCAGCACTCCACCCAACACATGACACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 90 bp CCTTCACTGGGAAAGAAGCATATTCTACTTAAGAGGCAAGGTAGTTaGGACTATGGAGACATCATCCTCTGCAATCATCTCTTGAAAATG +
Preference number: 1 (lower is better)
Translates to: PSLGKKHILLKRQGS*DYGDIILCNHLLKM
Trigger: CATTTTCAAGAGATGATTGCAGAGGATGATGTCTCCATAGTCTCAACTACCTTGCCTCTTAAGTAGAATATGCTTCTTTCCCAGTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 90 bp ACCCAGTCATCATTTCTGAGGGAAGATGTATGTGAAGTTTCAGTTTaGGACTCCAGGAATATATGTCTTCCAGCCATGGCAATAGGAATT +
Preference number: 1 (lower is better)
Translates to: TQSSFLREDVCEVSV*DSRNICLPAMAIGI
Trigger: AATTCCTATTGCCATGGCTGGAAGACATATATTCCTGGAGTCTCAAACTGAAACTTCACATACATCTTCCCTCAGAAATGATGACTGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 90 bp TCACATTTGCTGGTCAGACTTTCAAGGGCCCCATGGATACACATGTaGGCAATTTTCAAGATTAATTGTGAGATGGAAACTTCACTGTTA +
Preference number: 1 (lower is better)
Translates to: SHLLVRLSRAPWIHM*AIFKINCEMETSLL
Trigger: TAACAGTGAAGTTTCCATCTCACAATTAATCTTGAAAATTGCTCACATGTGTATCCATGGGGCCCTTGAAAGTCTGACCAGCAAATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 90 bp ATCTACTTGCCTGACTGCCAAAAGCAAGTTCACTTTTTAAACAAATaGAGAACGTCTATTGCTACACTGCTTATTCTTCCACCTGTCTTA +
Preference number: 1 (lower is better)
Translates to: IYLPDCQKQVHFLNK*RTSIATLLILPPVL
Trigger: TAAGACAGGTGGAAGAATAAGCAGTGTAGCAATAGACGTTCTTCATTTGTTTAAAAAGTGAACTTGCTTTTGGCAGTCAGGCAAGTAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CAA 90 bp CCAGCTGCTTCTGTGCCAAGTGACAGTAGGGCAGGCAGCACAGCCTaGGATCTGTACAACAAGGATCCCTACAAGGAAGGTTGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: PAASVPSDSRAGSTA*DLYNKDPYKEGCLC
Trigger: GCAGAGGCAACCTTCCTTGTAGGGATCCTTGTTGTACAGATCCAAGGCTGTGCTGCCTGCCCTACTGTCACTTGGCACAGAAGCAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CAA 90 bp CCCCCATCTCCTCAAAGGTCAGCTCAATCGTTTTACACCTGCCCTTaGTTAGCAGGCCCTGGGCCACTTATGCATGTGCATTCCAGTCTT +
Preference number: 2 (lower is better)
Translates to: PPSPQRSAQSFYTCP*LAGPGPLMHVHSSL
Trigger: AAGACTGGAATGCACATGCATAAGTGGCCCAGGGCCTGCTAACAAAGGGCAGGTGTAAAACGATTGAGCTGACCTTTGAGGAGATGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR TCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCAGTGGAGCCCAAGAGTaGGCCAGGCATTGTGCAGAG +
Preference number: 2 (lower is better)
Translates to: CATTEQSSKQASRPLYLFSGAQE*ARHCAE
Trigger: CTCTGCACAATGCCTGGCTCACTCTTGGGCTCCACT...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCGCAGTGGCATCATTATaGCTCACTGCAGCCCCACCC +
Preference number: 2 (lower is better)
Translates to: CATTEQSSKQASRPLYLFAVASL*LTAAPP
Trigger: GGGTGGGGCTGCAGTGAGCCATAATGATGCCACTGC...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAAGCAGGGAGGGGCCTTaGGAAGAGACTTTTGAAGAG +
Preference number: 2 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKSREGP*EETFEE
Trigger: CTCTTCAAAAGTCTCTTCCCAAGGCCCCTCCCTGCT...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR CCA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTATCCCTTCCCTTCACTaGGAAAGAAGCATATTCTAC +
Preference number: 2 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPIPSLH*ERSIFY
Trigger: GTAGAATATGCTTCTTTCCCAGTGAAGGGAAGGGAT...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAATGGAATGAAAACTGCTaGGGTCCATCCCTTCCCTTC +
Preference number: 2 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKWNENC*GPSLPF
Trigger: GAAGGGAAGGGATGGACCCCAGCAGTTTTCATTCCA...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CAA 90 bp TTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTaGTACCTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCT +
Preference number: 2 (lower is better)
Translates to: LCATTEQSSKQASRP*YLFSVVTTLLVSRS
Trigger: AGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR CAA 90 bp CCGGGGCACATTCCAAAGAACAGCGTAAGGAAGCAACTCAGAAGCTaGCTGGGTGGCAAAGGAAAGCAATTCGAGATTAAAACTTGGTTG +
Preference number: 2 (lower is better)
Translates to: PGHIPKNSVRKQLRS*LGGKGKQFEIKTWL
Trigger: CAACCAAGTTTTAATCTCGAATTGCTTTCCTTTGCCACCCAGCAAGCTTCTGAGTTGCTTCCTTACGCTGTTCTTTGGAATGTGCCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR GCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCACAACATGCTATCCCTaGACCCCTGTGATCAACTGG +
Preference number: 2 (lower is better)
Translates to: CATTEQSSKQASRPLYLFTTCYP*TPVINW
Trigger: CCAGTTGATCACAGGGGTGCAGGGATAGCATGTTGT...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGATAAGGACTTCATCATaGAGGTGGGTGGGGGCACAG +
Preference number: 2 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWIRTSS*RWVGAQ
Trigger: CTGTGCCCCCACCCACCTCCATGATGAAGTCCTTAT...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCTTTGTTAGCAGGCCCTaGGCCACTTATGCATGTGCA +
Preference number: 2 (lower is better)
Translates to: CATTEQSSKQASRPLYLFFVSRP*ATYACA
Trigger: TGCACATGCATAAGTGGCCCAGGGCCTGCTAACAAA...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGGCCTGGGCATGGACATaGTTAATCAACTCTGCTGGC +
Preference number: 2 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWAWAWT*LINSAG
Trigger: GCCAGCAGAGTTGATTAACCATGTCCATGCCCAGGC...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CCA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTCTAAGGTTATACTTCTaGGTGTTTCTTTCTAATCGA +
Preference number: 2 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPLRLYF*VFLSNR
Trigger: TCGATTAGAAAGAAACACCCAGAAGTATAACCTTAG...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGCAGGCAGCACAGCCTTaGATCTGTACAACAAGGATC +
Preference number: 2 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWQAAQP*ICTTRI
Trigger: GATCCTTGTTGTACAGATCCAAGGCTGTGCTGCCTG...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CAA 90 bp TGTGATATGATGAGGTTTGCCAATGATGGTACAGCAAGCCAAGATTaGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCT +
Preference number: 2 (lower is better)
Translates to: CDMMRFANDGTASQD*CATTEQSSKQASRP
Trigger: AGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACCTCATCATATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR TCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGGATGAGGTTTGCCAATaGTGGTACAGCAAGCCAAGA +
Preference number: 2 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWDEVCQ*WYSKPR
Trigger: TCTTGGCTTGCTGTACCATCATTGGCAAACCTCATC...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR GCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACTGTAGAAATTTGGGTTaGTTTCTACTCAGAAGCCTC +
Preference number: 2 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYCRNLG*FLLRSL
Trigger: GAGGCTTCTGAGTAGAAAGCAACCCAAATTTCTACA...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR GCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAATAGGATCATTCAATTaGCAGAGTCCACTTGTAGGC +
Preference number: 2 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKIGSFN*QSPLVG
Trigger: GCCTACAAGTGGACTCTGGCAATTGAATGATCCTAT...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR GCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGAAGGAAGGTTGCCTCTaGAAGCTAAGTGCAAGAAGG +
Preference number: 2 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWKEGCL*KLSARR
Trigger: CCTTCTTGCACTTAGCTTGCAGAGGCAACCTTCCTT...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACAGGAAGAGTGTGCATTaGGGAAAATGGAGAAAGAAT +
Preference number: 2 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYRKSVH*GKWRKN
Trigger: ATTCTTTCTCCATTTTCCCCAATGCACACTCTTCCT...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR CCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGGTGTCATGTGTTGGGTaGAGTGCTGGACTTGAAATC +
Preference number: 2 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWVSCVG*SAGLEI
Trigger: GATTTCAAGTCCAGCACTCCACCCAACACATGACAC...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR TCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCGTTATGCAGTACCTGTaGCTATGTGTACCTGTTACT +
Preference number: 2 (lower is better)
Translates to: CATTEQSSKQASRPLYLFVMQYL*LCVPVT
Trigger: AGTAACAGGTACACATAGTCACAGGTACTGCATAAC...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR TCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGAAGGGCATGTTTGCCTaGATTCAAGGGCACAAGTTT +
Preference number: 2 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWKGMFA*IQGHKF
Trigger: AAACTTGTGCCCTTGAATTCAGGCAAACATGCCCTT...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR GCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGATCTTTGCACGTGCGTaGACTGTTCTACTTTCTTCC +
Preference number: 2 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWIFARA*TVLLSS
Trigger: GGAAGAAAGTAGAACAGTGCACGCACGTGCAAAGAT...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR TCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAATCACAGTGTTGTATGTaGACAAATAGCTGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKSQCCM*TNSCFS
Trigger: TGAGAAACAGCTATTTGTTCACATACAACACTGTGA...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR TCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAACTGGAACAATGACTaGTCTCATAGCCACGTCCTC +
Preference number: 2 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGNWNND*SHSHVL
Trigger: GAGGACGTGGCTATGAGATCAGTCATTGTTCCAGTT...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR TCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCGCCTCTATTACATTTTaGAGTCCGAAACAGCAGTAT +
Preference number: 2 (lower is better)
Translates to: CATTEQSSKQASRPLYLFASITF*SPKQQY
Trigger: ATACTGCTGTTTCGGACTTCAAAATGTAATAGAGGC...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR GCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGATAGGATCATTCAATTaGCAGAGTCCACTTGTAGGC +
Preference number: 2 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWIGSFN*QSPLVG
Trigger: GCCTACAAGTGGACTCTGGCAATTGAATGATCCTAT...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR GCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGCATTCCAGGGTAAGCTaGCCCTGGAGTCAGGTCTTC +
Preference number: 2 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLHSRVS*PWSQVF
Trigger: GAAGACCTGACTCCAGGGGCAGCTTACCCTGGAATG...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAAGCCCACCATCCCTTTaGTTGGTAGGCAAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKSPPSL*LVGKEK
Trigger: TTTTTCCTTGCCTACCAACCAAAGGGATGGTGGGCT...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAGCCCACCATCCCTTTaGTTGGTAGGCAAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGSPPSL*LVGKEK
Trigger: TTTTTCCTTGCCTACCAACCAAAGGGATGGTGGGCT...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR CCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAACTGTACCCTGTCTGCTaGCAGCTTCTGAACCTAATA +
Preference number: 2 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKLYPVC*QLLNLI
Trigger: TATTAGGTTCAGAAGCTGCCAGCAGACAGGGTACAG...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR GCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGCCTCTGTACCCTGTCTaGTGGCAGCTTCTGAACCTA +
Preference number: 2 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLPLYPV*WQLLNL
Trigger: TAGGTTCAGAAGCTGCCAGCAGACAGGGTACAGAGG...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR GCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGTACTGGAATGAAAACTaGTGGGGTCCATCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLYWNEN*WGPSLP
Trigger: GGGAAGGGATGGACCCCAGCAGTTTTCATTCCAGTA...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR GCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCTTTCAGCAAATTATGTaGAGGAATCACCCTCAAGAT +
Preference number: 2 (lower is better)
Translates to: CATTEQSSKQASRPLYLFFQQIM*RNHPQD
Trigger: ATCTTGAGGGTGATTCCTGCACATAATTTGCTGAAA...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR GCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGGGCAGTTATTCTTCTTaGCCCCAGGCTGTCACTGAC +
Preference number: 2 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLGSYSS*PQAVTD
Trigger: GTCAGTGACAGCCTGGGGGCAAGAAGAATAACTGCC...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTAAGCAGGGAGGGGCCTTaGGAAGAGACTTTTGAAGAG +
Preference number: 2 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVSREGP*EETFEE
Trigger: CTCTTCAAAAGTCTCTTCCCAAGGCCCCTCCCTGCT...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR TCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAGTTATGCAGTACCTGTaGCTATGTGTACCTGTTACT +
Preference number: 2 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKVMQYL*LCVPVT
Trigger: AGTAACAGGTACACATAGTCACAGGTACTGCATAAC...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR GCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGAACTATGGTAAAAGCTaGAGCAACAATAAGGACTTC +
Preference number: 2 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWNYGKS*SNNKDF
Trigger: GAAGTCCTTATTGTTGCTGCAGCTTTTACCATAGTT...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCTACACTATTTGTGTTTaGGCAGTGAAGATTAACCAA +
Preference number: 2 (lower is better)
Translates to: CATTEQSSKQASRPLYLFYTICV*AVKINQ
Trigger: TTGGTTAATCTTCACTGCCCAAACACAAATAGTGTA...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR TCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATTCTTGTTTCCAAGTCTaGCAGCTCCTACTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: ELTENYFDYTQSSFLREDSCFQV*QLLLFL
Trigger: AAGGAAGAGTAGGAGCTGTCAGACTTGGAAACAAGA...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR TCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGTCCACGCTGCAAATGTaGGTTTGTGTATGGCAAGTT +
Preference number: 2 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLSTLQM*VCVWQV
Trigger: AACTTGCCATACACAAACTCACATTTGCAGCGTGGA...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR GCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGACAACTGTTACATCTGTaGTGTACCCTCTGTACCCTG +
Preference number: 2 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRQLLHL*CTLCTL
Trigger: CAGGGTACAGAGGGTACAGCACAGATGTAACAGTTG...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR GCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTACAACTGTTACATCTGTaGTGTACCCTCTGTACCCTG +
Preference number: 2 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVQLLHL*CTLCTL
Trigger: CAGGGTACAGAGGGTACAGCACAGATGTAACAGTTG...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR CCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGGATGTAATTAGCTGGTaGAACTGTAAAGTTTCAGTT +
Preference number: 2 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWDVISW*NCKVSV
Trigger: AACTGAAACTTTACAGTTCCACCAGCTAATTACATC...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR TCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAAAAACACACCCAACTGTaGTATGATGAGGTTTGCCAA +
Preference number: 2 (lower is better)
Translates to: FTKEDKAKATQSISVKQKKHTQL*YDEVCQ
Trigger: TTGGCAAACCTCATCATATCACAGTTGGGTGTGTTT...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR TCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAAAGAGGCAAGGTAGTTaGGACTATGGAGACATCATC +
Preference number: 2 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRKRQGS*DYGDII
Trigger: GATGATGTCTCCATAGTCTCAACTACCTTGCCTCTT...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR GCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGCAGCAGTATTTCCTCTaGTCAGAGAAAGGTGAACCT +
Preference number: 2 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLQQYFL*SEKGEP
Trigger: AGGTTCACCTTTCTCTGAGCAGAGGAAATACTGCTG...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATTCCGTCAATGGTAGCTaGGAAATTTCTGCTATATGG +
Preference number: 2 (lower is better)
Translates to: ELTENYFDYTQSSFLREDSVNGS*EISAIW
Trigger: CCATATAGCAGAAATTTCCCAGCTACCATTGACGGA...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR TCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGCCACACTGCGTTATTTaGTTAGGTTGGAAAAAGAGA +
Preference number: 2 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLPHCVI*LGWKKR
Trigger: TCTCTTTTTCCAACCTAATCAAATAACGCAGTGTGG...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR GCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAATGTAGAAATTTGGGTTaGTTTCTACTCAGAAGCCTC +
Preference number: 2 (lower is better)
Translates to: FTKEDKAKATQSISVKQKCRNLG*FLLRSL
Trigger: GAGGCTTCTGAGTAGAAAGCAACCCAAATTTCTACA...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR GCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGCTGCTGCCTAGTTACTaGCAACTTAAAGAATGCAAG +
Preference number: 2 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLLLPSY*QLKECK
Trigger: CTTGCATTCTTTAAGTTGGCAGTAACTAGGCAGCAG...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR GCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGCATCATACTTTTCTGTaGCCTGTGATTGTAGAGGAG +
Preference number: 2 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLHHTFL*PVIVEE
Trigger: CTCCTCTACAATCACAGGGCACAGAAAAGTATGATG...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGAGGAAGAGTGTGCATTaGGGAAAATGGAGAAAGAAT +
Preference number: 2 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLRKSVH*GKWRKN
Trigger: ATTCTTTCTCCATTTTCCCCAATGCACACTCTTCCT...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR TCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATTCACAGTGTTGTATGTaGACAAATAGCTGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: ELTENYFDYTQSSFLREDSQCCM*TNSCFS
Trigger: TGAGAAACAGCTATTTGTTCACATACAACACTGTGA...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR TCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGATTTTTCTTAGCAGCATaGACTGATAGCTGGAAGGTA +
Preference number: 2 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRFFLAA*TDSWKV
Trigger: TACCTTCCAGCTATCAGTTCATGCTGCTAAGAAAAA...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR TCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGTTTTTCTTAGCAGCATaGACTGATAGCTGGAAGGTA +
Preference number: 2 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLFFLAA*TDSWKV
Trigger: TACCTTCCAGCTATCAGTTCATGCTGCTAAGAAAAA...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR TCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAAAAAGAGGTCTGAATTaGATCCTTTGGCAAGCCAAA +
Preference number: 2 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRKRGLN*ILWQAK
Trigger: TTTGGCTTGCCAAAGGATTCAATTCAGACCTCTTTT...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR TCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAAAGTTTAAAAGAGGTCTaGATTGAATCCTTTGGCAAG +
Preference number: 2 (lower is better)
Translates to: FTKEDKAKATQSISVKQKSLKEV*IESFGK
Trigger: CTTGCCAAAGGATTCAATTCAGACCTCTTTTAAACT...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR GCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGGAGACATCATCCTCTaGAATCATCTCTTGAAAATG +
Preference number: 2 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRGDIIL*NHLLKM
Trigger: CATTTTCAAGAGATGATTGCAGAGGATGATGTCTCC...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR GCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATAACTATAAGGCAATCTaGAACTGGAAAGCATTTCCT +
Preference number: 2 (lower is better)
Translates to: ELTENYFDYTQSSFLREDNYKAI*NWKAFP
Trigger: AGGAAATGCTTTCCAGTTGCAGATTGCCTTATAGTT...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR TCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGTTTTGCCTACTGTGCTaGTTTAGATCAGAATACCAA +
Preference number: 2 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLFCLLC*FRSEYQ
Trigger: TTGGTATTCTGATCTAAATCAGCACAGTAGGCAAAA...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR GCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAAAAACTTGAAATAATCTaGCCTTTAGTCCTGCCTTTA +
Preference number: 2 (lower is better)
Translates to: FTKEDKAKATQSISVKQKKLEII*PLVLPL
Trigger: TAAAGGCAGGACTAAAGGGCAGATTATTTCAAGTTT...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR GCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGATAGCACATTGCATGTaGTTTAAAAGGGACTTCTTG +
Preference number: 2 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLIAHCM*FKRDFL
Trigger: CAAGAAGTCCCTTTTAAAGCACATGCAATGTGCTAT...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGATGGTACATCTTATATTaGCTCAATATCCAGAAGGAA +
Preference number: 2 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRWYILY*LNIQKE
Trigger: TTCCTTCTGGATATTGAGCCAATATAAGATGTACCA...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR CCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGTATAGAAAACCTCAGTaGACTCTGATGAGTCAAAAT +
Preference number: 2 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLYRKPQ*TLMSQN
Trigger: ATTTTGACTCATCAGAGTCCACTGAGGTTTTCTATA...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 72 bp GTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATaGGCCCTGCAGGACTCCCACAGTGGCCCTCACCTT +
Preference number: 3 (lower is better)
Translates to: VLGVINIWRSPL*ALQDSHSGPHL
Trigger: AAGGTGAGGGCCACTGTGGGAGTCCTGCAGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR GCA 72 bp CCCAGGGTGAAGAGCAGTGGCATCATTATGGCTCACTaGAGCCCCACCCAGACTCCTGGGCTCAAGGATTTT +
Preference number: 3 (lower is better)
Translates to: PRVKSSGIIMAH*SPTQTPGLKDF
Trigger: AAAATCCTTGAGCCCAGGAGTCTGGGTGGGGCTGCAGTGAGCCATAATGATGCCACTGCTCTTCACCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 72 bp CTGCAAGCTAAGTGCAAGAAGGCTGTGTACTGGGAGTaGTCAACATCTGGCGAAGCCCTCTATGGGCCCTGC +
Preference number: 3 (lower is better)
Translates to: LQAKCKKAVYWE*STSGEALYGPC
Trigger: GCAGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCTTGCACTTAGCTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 72 bp CCCATACTCAACCAGTTGGAAGAGTCGGAGGCAGGGTaGCAGCCGAAGGGAAACTATGGTAAAAGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: PILNQLEESEAG*QPKGNYGKSCS
Trigger: GCTGCAGCTTTTACCATAGTTTCCCTTCGGCTGTCACCCTGCCTCCGACTCTTCCAACTGGTTGAGTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 72 bp AAAGCTGCAGCAACAATAAGGACTTCATCATGGAGGTaGGTGGGGGCACAGGACTCTGAGTGCGAGGACAAG +
Preference number: 3 (lower is better)
Translates to: KAAATIRTSSWR*VGAQDSECEDK
Trigger: CTTGTCCTCGCACTCAGAGTCCTGTGCCCCCACCCACCTCCATGATGAAGTCCTTATTGTTGCTGCAGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 72 bp CAAGGGCAGTTATTCTTCTTGCCCCCAGGCTGTCACTaGCATTTCTGGTGGACAGCATCTTTGCACGTGCGT +
Preference number: 3 (lower is better)
Translates to: QGQLFFLPPGCH*HFWWTASLHVR
Trigger: ACGCACGTGCAAAGATGCTGTCCACCAGAAATGTCAGTGACAGCCTGGGGGCAAGAAGAATAACTGCCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR GCA 72 bp TCAGCTGGGCAAAGACACAAGGGCAGTTATTCTTCTTaGCCCCAGGCTGTCACTGACATTTCTGGTGGACAG +
Preference number: 3 (lower is better)
Translates to: SAGQRHKGSYSS*PQAVTDISGGQ
Trigger: CTGTCCACCAGAAATGTCAGTGACAGCCTGGGGGCAAGAAGAATAACTGCCCTTGTGTCTTTGCCCAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 72 bp CTGTGCCAAGTGACAGTAGGGCAGGCAGCACAGCCTTaGATCTGTACAACAAGGATCCCTACAAGGAAGGTT +
Preference number: 3 (lower is better)
Translates to: LCQVTVGQAAQP*ICTTRIPTRKV
Trigger: AACCTTCCTTGTAGGGATCCTTGTTGTACAGATCCAAGGCTGTGCTGCCTGCCCTACTGTCACTTGGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 72 bp ATGGTAAAAGCTGCAGCAACAATAAGGACTTCATCATaGAGGTGGGTGGGGGCACAGGACTCTGAGTGCGAG +
Preference number: 3 (lower is better)
Translates to: MVKAAATIRTSS*RWVGAQDSECE
Trigger: CTCGCACTCAGAGTCCTGTGCCCCCACCCACCTCCATGATGAAGTCCTTATTGTTGCTGCAGCTTTTACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 72 bp GACTGCCTGGGCATGGACATGGTTAATCAACTCTGCTaGCTGCCTGTGAGGAATATCAGCTGGGCAAAGACA +
Preference number: 3 (lower is better)
Translates to: DCLGMDMVNQLC*LPVRNISWAKT
Trigger: TGTCTTTGCCCAGCTGATATTCCTCACAGGCAGCCAGCAGAGTTGATTAACCATGTCCATGCCCAGGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CAA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTCTGAGAAGCCTAAGTTaGTTCCCAAAACAGGGGATT +
Preference number: 3 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPLRSLS*FPKQGI
Trigger: AATCCCCTGTTTTGGGAACAAACTTAGGCTTCTCAG...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 72 bp TCAGCCAGAGAGAGACCAGGAAAGGGCATGTTTGCCTaGATTCAAGGGCACAAGTTTGGCAAAGGGCACATG +
Preference number: 3 (lower is better)
Translates to: SARERPGKGMFA*IQGHKFGKGHM
Trigger: CATGTGCCCTTTGCCAAACTTGTGCCCTTGAATTCAGGCAAACATGCCCTTTCCTGGTCTCTCTCTGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR GCA 72 bp CCATCTCCTCAAAGGTCAGCTCAATCGTTTTACACCTaGCCTTTGTTAGCAGGCCCTGGGCCACTTATGCAT +
Preference number: 3 (lower is better)
Translates to: PSPQRSAQSFYT*PLLAGPGPLMH
Trigger: ATGCATAAGTGGCCCAGGGCCTGCTAACAAAGGGCAGGTGTAAAACGATTGAGCTGACCTTTGAGGAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR GCA 72 bp CAGGCTGTCACTGACATTTCTGGTGGACAGCATCTTTaGACGTGCGTGCACTGTTCTACTTTCTTCCAGTGG +
Preference number: 3 (lower is better)
Translates to: QAVTDISGGQHL*TCVHCSTFFQW
Trigger: CCACTGGAAGAAAGTAGAACAGTGCACGCACGTGCAAAGATGCTGTCCACCAGAAATGTCAGTGACAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 72 bp GGTGACTGTTGTGATCAGTGCCCGACTTGTTCTGCCTaGTCAAGCACAGTGGGCAGAGATCCAATCACAAAA +
Preference number: 3 (lower is better)
Translates to: GDCCDQCPTCSA*SSTVGRDPITK
Trigger: TTTTGTGATTGGATCTCTGCCCACTGTGCTTGATCAGGCAGAACAAGTCGGGCACTGATCACAACAGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR GCA 72 bp CTGTACAACAAGGATCCCTACAAGGAAGGTTGCCTCTaGAAGCTAAGTGCAAGAAGGCTGTGTACTGGGAGT +
Preference number: 3 (lower is better)
Translates to: LYNKDPYKEGCL*KLSARRLCTGS
Trigger: ACTCCCAGTACACAGCCTTCTTGCACTTAGCTTGCAGAGGCAACCTTCCTTGTAGGGATCCTTGTTGTACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 72 bp TTGACAACATGCTATCCCTGCACCCCTGTGATCAACTaGAGCTCACATAAGCAGGGGCAACCAAGTAAAGCA +
Preference number: 3 (lower is better)
Translates to: LTTCYPCTPVIN*SSHKQGQPSKA
Trigger: TGCTTTACTTGGTTGCCCCTGCTTATGTGAGCTCCAGTTGATCACAGGGGTGCAGGGATAGCATGTTGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 72 bp AATCAACTCTGCTGGCTGCCTGTGAGGAATATCAGCTaGGCAAAGACACAAGGGCAGTTATTCTTCTTGCCC +
Preference number: 3 (lower is better)
Translates to: NQLCWLPVRNIS*AKTQGQLFFLP
Trigger: GGGCAAGAAGAATAACTGCCCTTGTGTCTTTGCCCAGCTGATATTCCTCACAGGCAGCCAGCAGAGTTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CAA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTATATCCATTCTCAAGTaGTCACCACACCCTCTTTTA +
Preference number: 3 (lower is better)
Translates to: QGKLPLESGLPPALSCFPISILK*SPHPLL
Trigger: TAAAAGAGGGTGTGGTGACAACTTGAGAATGGATAT...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 72 bp GATGCCCTAGCAGTGACCAGTAACTGGAACAATGACTaGTCTCATAGCCACGTCCTCTCCTCAGCACAATTT +
Preference number: 3 (lower is better)
Translates to: DALAVTSNWNND*SHSHVLSSAQF
Trigger: AAATTGTGCTGAGGAGAGGACGTGGCTATGAGATCAGTCATTGTTCCAGTTACTGGTCACTGCTAGGGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR CCA 72 bp TTTAAAAACTTCCACCATTCCAGGGTAAGCTGCCCCTaGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTC +
Preference number: 3 (lower is better)
Translates to: FKNFHHSRVSCP*SQVFLQPYLAF
Trigger: GAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTGGAATGGTGGAAGTTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CAA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACTCTGTGGTCACCACCTaGCTAGTGTCACGTTCTCAA +
Preference number: 3 (lower is better)
Translates to: DLCATTEQSSKQASRPLYSVVTT*LVSRSQ
Trigger: TTGAGAACGTGACACTAGCAAGGTGGTGACCACAGA...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR CAA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCTCTGTGGTCACCACCTaGCTAGTGTCACGTTCTCAA +
Preference number: 3 (lower is better)
Translates to: CATTEQSSKQASRPLYLFSVVTT*LVSRSQ
Trigger: TTGAGAACGTGACACTAGCAAGGTGGTGACCACAGA...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR CAA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACAATAGGATCATTCAATaGCCAGAGTCCACTTGTAGG +
Preference number: 3 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYNRIIQ*PESTCR
Trigger: CCTACAAGTGGACTCTGGCAATTGAATGATCCTATT...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR CAA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAACAAGCTTCAAGACCTTaGTACCTATTCTCTGTGGTC +
Preference number: 3 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKQASRP*YLFSVV
Trigger: GACCACAGAGAATAGGTACAAAGGTCTTGAAGCTTG...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR CAA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGACAGCAAGCCAAGATTaGTGTGCCACCACGGAACAA +
Preference number: 3 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWTASQD*CATTEQ
Trigger: TTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGT...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR GCA 72 bp TTGGATCTGTACAACAAGGATCCCTACAAGGAAGGTTaGCTCTGCAAGCTAAGTGCAAGAAGGCTGTGTACT +
Preference number: 3 (lower is better)
Translates to: LDLYNKDPYKEG*LCKLSARRLCT
Trigger: AGTACACAGCCTTCTTGCACTTAGCTTGCAGAGGCAACCTTCCTTGTAGGGATCCTTGTTGTACAGATCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR GCA 72 bp ATTCCTCACTCTGTTCATTTGACAACATGCTATCCCTaGACCCCTGTGATCAACTGGAGCTCACATAAGCAG +
Preference number: 3 (lower is better)
Translates to: IPHSVHLTTCYP*TPVINWSSHKQ
Trigger: CTGCTTATGTGAGCTCCAGTTGATCACAGGGGTGCAGGGATAGCATGTTGTCAAATGAACAGAGTGAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 72 bp AAAGGGCATGTTTGCCTGAATTCAAGGGCACAAGTTTaGCAAAGGGCACATGAGGGTAAGACTCACAGAACA +
Preference number: 3 (lower is better)
Translates to: KGHVCLNSRAQV*QRAHEGKTHRT
Trigger: TGTTCTGTGAGTCTTACCCTCATGTGCCCTTTGCCAAACTTGTGCCCTTGAATTCAGGCAAACATGCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 72 bp CTAGAAGTTTTTGAGAGATATACAGAGGAGACTGCCTaGGCATGGACATGGTTAATCAACTCTGCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: LEVFERYTEETA*AWTWLINSAGC
Trigger: GCAGCCAGCAGAGTTGATTAACCATGTCCATGCCCAGGCAGTCTCCTCTGTATATCTCTCAAAAACTTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CAA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCTCCTCCAGCCTTATCTaGCTTTCCTTGATTTCCCAT +
Preference number: 3 (lower is better)
Translates to: CATTEQSSKQASRPLYLFSSSLI*LSLISH
Trigger: ATGGGAAATCAAGGAAAGCAAGATAAGGCTGGAGGA...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR GCA 72 bp TACTTCCCAACACACACATGGGCCACTTCACTCTGCTaGCTAGTTACTGCCAACTTAAAGAATGCAAGTTAC +
Preference number: 3 (lower is better)
Translates to: YFPTHTWATSLC*LVTANLKNASY
Trigger: GTAACTTGCATTCTTTAAGTTGGCAGTAACTAGGCAGCAGAGTGAAGTGGCCCATGTGTGTGTTGGGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CAA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACAATAGGATCATTCAATaGCCAGAGTCCACTTGTAGG +
Preference number: 3 (lower is better)
Translates to: DLCATTEQSSKQASRPLYNRIIQ*PESTCR
Trigger: CCTACAAGTGGACTCTGGCAATTGAATGATCCTATT...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR CAA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACTTGGTACATCTTATATaGGCTCAATATCCAGAAGGA +
Preference number: 3 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYLVHLI*AQYPEG
Trigger: TCCTTCTGGATATTGAGCCAATATAAGATGTACCAA...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR CAA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAAGAGCCCACCATCCCTTaGGTTGGTAGGCAAGGAAAA +
Preference number: 3 (lower is better)
Translates to: FTKEDKAKATQSISVKQKEPTIP*VGRQGK
Trigger: TTTTCCTTGCCTACCAACCAAAGGGATGGTGGGCTC...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR CAA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGGCCACACTGCGTTATTaGATTAGGTTGGAAAAAGAG +
Preference number: 3 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWATLRY*IRLEKE
Trigger: CTCTTTTTCCAACCTAATCAAATAACGCAGTGTGGC...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR CAA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATGCAGGCAGCACAGCCTaGGATCTGTACAACAAGGAT +
Preference number: 3 (lower is better)
Translates to: ELTENYFDYTQSSFLREDAGSTA*DLYNKD
Trigger: ATCCTTGTTGTACAGATCCAAGGCTGTGCTGCCTGC...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CAA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCACAATGGCAATAGTTTaGGGACAGAATGCTCAAAAG +
Preference number: 3 (lower is better)
Translates to: CATTEQSSKQASRPLYLFTMAIV*GQNAQK
Trigger: CTTTTGAGCATTCTGTCCCAAAACTATTGCCATTGT...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 72 bp GTGTTGGGTGGAGTGCTGGACTTGAAATCAGATGTATaGGTTAGATTTTCAGCTCTGCCACTTACCTTTTTG +
Preference number: 3 (lower is better)
Translates to: VLGGVLDLKSDV*VRFSALPLTFL
Trigger: CAAAAAGGTAAGTGGCAGAGCTGAAAATCTAACTCATACATCTGATTTCAAGTCCAGCACTCCACCCAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 72 bp TTTTTAATACCAAGTGCCATCATAACATTACTAATTTaGCTGACCGATTCTCTCACCCCTCCTAGAGCTGCC +
Preference number: 3 (lower is better)
Translates to: FLIPSAIITLLI*LTDSLTPPRAA
Trigger: GGCAGCTCTAGGAGGGGTGAGAGAATCGGTCAGCCAAATTAGTAATGTTATGATGGCACTTGGTATTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 72 bp GGCCACTTATGCATGTGCATTCCAGTCTTGAGTATCTaGATACAAACTCTATGGAGATCAGCTACAGGATTT +
Preference number: 3 (lower is better)
Translates to: GHLCMCIPVLSI*IQTLWRSATGF
Trigger: AAATCCTGTAGCTGATCTCCATAGAGTTTGTATCCAGATACTCAAGACTGGAATGCACATGCATAAGTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 72 bp GGAAAGAAGCATATTCTACTTAAGAGGCAAGGTAGTTaGGACTATGGAGACATCATCCTCTGCAATCATCTC +
Preference number: 3 (lower is better)
Translates to: GKKHILLKRQGS*DYGDIILCNHL
Trigger: GAGATGATTGCAGAGGATGATGTCTCCATAGTCTCAACTACCTTGCCTCTTAAGTAGAATATGCTTCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 72 bp CTGGTCAGACTTTCAAGGGCCCCATGGATACACATGTaGGCAATTTTCAAGATTAATTGTGAGATGGAAACT +
Preference number: 3 (lower is better)
Translates to: LVRLSRAPWIHM*AIFKINCEMET
Trigger: AGTTTCCATCTCACAATTAATCTTGAAAATTGCTCACATGTGTATCCATGGGGCCCTTGAAAGTCTGACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CAA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAACACGTACTATAAGCTaGCTTGAAGATAGAAGTACA +
Preference number: 3 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKTRTIS*LEDRST
Trigger: TGTACTTCTATCTTCAAGCAAGCTTATAGTACGTGT...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR CAA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAAGCCACACTGCGTTATTaGATTAGGTTGGAAAAAGAG +
Preference number: 3 (lower is better)
Translates to: FTKEDKAKATQSISVKQKATLRY*IRLEKE
Trigger: CTCTTTTTCCAACCTAATCAAATAACGCAGTGTGGC...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR CAA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACTCTGCAATCATCTCTaGAAAATGTTTCAAGACACA +
Preference number: 3 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGLCNHL*KMFQDT
Trigger: TGTGTCTTGAAACATTTTCAAGAGATGATTGCAGAG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 72 bp TGTAAACAGGGATTTCTATGTCCCAAGGAGAGAGTTTaGTTTTCAAGGCTTCTAAAATCTACTTGCCTGACT +
Preference number: 3 (lower is better)
Translates to: CKQGFLCPKERV*FSRLLKSTCLT
Trigger: AGTCAGGCAAGTAGATTTTAGAAGCCTTGAAAATCAAACTCTCTCCTTGGGACATAGAAATCCCTGTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 72 bp CTATACCCAGTCATCATTTCTGAGGGAAGATGTATGTaGAGTTTCAGTTTGAGACTCCAGGAATATATGTCT +
Preference number: 3 (lower is better)
Translates to: LYPVIISEGRCM*SFSLRLQEYMS
Trigger: AGACATATATTCCTGGAGTCTCAAACTGAAACTTCACATACATCTTCCCTCAGAAATGATGACTGGGTATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CAA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATCTGCCACTTACCTTTTaGATCTTGGGAAAATTCTCA +
Preference number: 3 (lower is better)
Translates to: ELTENYFDYTQSSFLREDLPLTF*ILGKFS
Trigger: TGAGAATTTTCCCAAGATCAAAAAGGTAAGTGGCAG...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR TCA 72 bp CCTGACTGCCAAAAGCAAGTTCACTTTTTAAACAAATaGAGAACGTCTATTGCTACACTGCTTATTCTTCCA +
Preference number: 3 (lower is better)
Translates to: PDCQKQVHFLNK*RTSIATLLILP
Trigger: TGGAAGAATAAGCAGTGTAGCAATAGACGTTCTTCATTTGTTTAAAAAGTGAACTTGCTTTTGGCAGTCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CCA 72 bp GGCAAACAGTTCAATGTAATAAAATTACCCAGGTCCTaGAAGATAGTCCACAGTTATAATGCTCTGAATGAA +
Preference number: 3 (lower is better)
Translates to: GKQFNVIKLPRS*KIVHSYNALNE
Trigger: TTCATTCAGAGCATTATAACTGTGGACTATCTTCCAGGACCTGGGTAATTTTATTACATTGAACTGTTTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CAA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGAAACACTATACAGAGTaGCAAAGTCGTCTCCCAAAA +
Preference number: 3 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLKHYTE*QSRLPK
Trigger: TTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTT...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR-3UTR CAA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGCAACATTCCACAATGTaGTACACAGTAGAATTACTC +
Preference number: 3 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLQHSTM*YTVELL
Trigger: GAGTAATTCTACTGTGTACAACATTGTGGAATGTTG...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CAA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGCTGATAGCAACAAGTTaGGCAGTAGTACACTCAAAA +
Preference number: 3 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLLIATS*AVVHSK
Trigger: TTTTGAGTGTACTACTGCCAAACTTGTTGCTATCAG...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR-3UTR CAA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAACACGTACTATAAGCTaGCTTGAAGATAGAAGTACA +
Preference number: 3 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRTRTIS*LEDRST
Trigger: TGTACTTCTATCTTCAAGCAAGCTTATAGTACGTGT...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTGGTGGGCGCCGATGCTaGTGCTGTAGCTGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPGGRRC*CCSCGS
Trigger: GCTGCCGCAGCTACAGCATCAGCATCGGCGCCCACC...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTAGCACTGGTATAGGGTaGTCACGCGCCGCGGTGGAA +
Preference number: 4 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPSTGIG*SRAAVE
Trigger: TTCCACCGCGGCGCGTGATCACCCTATACCAGTGCT...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTTCCCTGTCCCTCGCCTaGACACTGGTTTCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: QGKLPLESGLPPALSCFPSLSLA*TLVSSR
Trigger: TCGGGAGGAAACCAGTGTTCAGGCGAGGGACAGGGA...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACTCACGCGGCGGCCGCTaGGGATCCTGCTACCGGCGC +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYSRGGR*GSCYRR
Trigger: GCGCCGGTAGCAGGATCCGCAGCGGCCGCCGCGTGA...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372129.4
CDS-3UTR GCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAGGGGCTTCTGCAGGGTaGCGGGGACGTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKGASAG*RGRAGL
Trigger: CAGCCCAGCACGTCCCCGGCACCCTGCAGAAGCCCC...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACGGGAGCCAGTGGCCGTaGAGAGCCACATGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYGSQWP*RATWLP
Trigger: CGGGAGCCATGTGGCTCTCCACGGCCACTGGCTCCC...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTGTATTCCAGCCGAGCTaGGGCGTCAGCAGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: QGKLPLESGLPPALSCFPVFQPS*GVSSLE
Trigger: CTCGAGACTGCTGACGCCCCAGCTCGGCTGGAATAC...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTGCATTAGCAACAGGTTaGAACCAGCGGGCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: QGKLPLESGLPPALSCFPALATG*NQRAEA
Trigger: CGCCTCTGCCCGCTGGTTTCAACCTGTTGCTAATGC...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTGAGTCGGAGGCAGGGTaGCAGCCGAAGGGAAACTAT +
Preference number: 4 (lower is better)
Translates to: QGKLPLESGLPPALSCFPESEAG*QPKGNY
Trigger: ATAGTTTCCCTTCGGCTGTCACCCTGCCTCCGACTC...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGTTCCGGAGCGGCAGCTaGAGCGGCAGCCCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWFRSGS*SGSPAS
Trigger: GCTGGCGGGGCTGCCGCTGCAGCTGCCGCTCCGGAA...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCCGCCCACTCCACTCTaGGCGCACGACAGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYPPTPL*AHDSGQ
Trigger: TTGCCCGCTGTCGTGCGCTCAGAGTGGAGTGGGCGG...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372129.4
CDS-3UTR TCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACACGACCCGGTCCCAATaGGTGCGGTCGGGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYTTRSQ*VRSGFP
Trigger: CGGGAACCCCGACCGCACTCATTGGGACCGGGTCGT...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTCCAGCCCCCTGGGTTTaGCTATTACCTGCCACACAT +
Preference number: 4 (lower is better)
Translates to: QGKLPLESGLPPALSCFPPAPWV*LLPATH
Trigger: ATGTGTGGCAGGTAATAGTCAAACCCAGGGGGCTGG...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCGGTGGGCGCCGATGCTaGTGCTGTAGCTGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFGGRRC*CCSCGS
Trigger: GCTGCCGCAGCTACAGCATCAGCATCGGCGCCCACC...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACTCCCTGGCCACCACCTaGGCCATGCCCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYSLATT*AMPTSR
Trigger: CCTGGAGGTGGGCATGGCTCAGGTGGTGGCCAGGGA...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCCTGTCTACCCTCGTCTaGCCGCCCCAGCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFLSTLV*PPQPPP
Trigger: AGGAGGGGGCTGGGGCGGGCAGACGAGGGTAGACAG...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372129.4
CDS-3UTR GCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAGGCACCAAGCCCAGGTaGCTCCTAGCGGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKGTKPR*LLADSR
Trigger: CCTGCTGTCCGCTAGGAGGCACCTGGGCTTGGTGCC...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAACCGCTCTCCTTGACCTaGGCCCTCTGGGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKPLSLT*ALWAGA
Trigger: TGCACCTGCCCAGAGGGCGCAGGTCAAGGAGAGCGG...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTCTTTGCCCTGGGGATTaGCTTCCTCCCCAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPLCPGD*LPPQSC
Trigger: GCAACTTTGGGGAGGAAGGCAATCCCCAGGGCAAAG...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCCCACCACCTGAACCGTaGCCACCTGCGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFPPPEP*PPAVPW
Trigger: CCAGGGCACCGCAGGTGGGCACGGTTCAGGTGGTGG...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTAGGAAAGAAGCGGGGTaGTCACCACTGCTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPRKEAG*SPLLLE
Trigger: CTCTAGCAGCAGTGGTGACCACCCCGCTTCTTTCCT...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACGCTGGACGACCACGCTaGCCACTTCGGTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYAGRPR*PLRCSA
Trigger: GGCTGAACACCGAAGTGGCCAGCGTGGTCGTCCAGC...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAGCAGTCTTCCTCGCCTaGAGTGGGCCACAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKAVFLA*SGPQAR
Trigger: GCGAGCCTGTGGCCCACTCCAGGCGAGGAAGACTGC...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTCCGAGCTATGGCTACTaGAGCCTTGGCCATTTGAGC +
Preference number: 4 (lower is better)
Translates to: QGKLPLESGLPPALSCFPPSYGY*SLGHLS
Trigger: GCTCAAATGGCCAAGGCTCCAGTAGCCATAGCTCGG...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACGCAGCCCCGCCAGCCTaGTTATCACCTCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYAAPPA*LSPLAR
Trigger: CCTTGCCAGAGGTGATAACCAGGCTGGCGGGGCTGC...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCTCTCTCCGGGGGTCTTaGCACCCGGCGACTGCGAGG +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFSLRGS*HPATAR
Trigger: CCTCGCAGTCGCCGGGTGCCAAGACCCCCGGAGAGA...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACTCTCTGGCCACCACCTaGACCGTGCCCACCTGCGGT +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYSLATT*TVPTCG
Trigger: ACCGCAGGTGGGCACGGTTCAGGTGGTGGCCAGAGA...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAGCAGGTAGCCGCGTTTaGAGACTTCCTCCCCGACGG +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKAGSRV*RLPPRR
Trigger: CCGTCGGGGAGGAAGTCTGCAAACGCGGCTACCTGC...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAGCAGCTGCGGCTGCTaGGCCGATGCCCGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGSSCGC*ADARGC
Trigger: GCAGCCCCGGGCATCGGCGCAGCAGCCGCAGCTGCT...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTTTGGGCTCCCCTTACTaGTTCGGCATCAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: QGKLPLESGLPPALSCFPLGSPY*FGISSI
Trigger: AATGCTGCTGATGCCGAAGCAGTAAGGGGAGCCCAA...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAGCAGCCCCGCCAGCCTaGTTATCACCTCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKAAPPA*LSPLAR
Trigger: CCTTGCCAGAGGTGATAACCAGGCTGGCGGGGCTGC...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTATAAGGACTTCATCATaGAGGTGGGTGGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPIRTSS*RWVGAQ
Trigger: CTGTGCCCCCACCCACCTCCATGATGAAGTCCTTAT...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCGGGCAAAACAACACGTaGCCACAGCCTCACGCGGCG +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFGQNNT*PQPHAA
Trigger: CGCCGCGTGAGGCTGTGGTCACGTGTTGTTTTGCCC...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372129.4
CDS-3UTR TCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGTTCGGACTCGGAGTCTaGCCGGGAGCCAGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWFGLGV*PGASGR
Trigger: ACGGCCACTGGCTCCCGGTCAGACTCCGAGTCCGAA...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAGCTCTCCCGGACCGATaGCAGTGGACCTGCCTACTT +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKALPDR*QWTCLL
Trigger: AAGTAGGCAGGTCCACTGTCATCGGTCCGGGAGAGC...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAACGTCGCCGATGGCCCTaGGGTGGCAAAACTGCTCAA +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKRRRWP*GGKTAQ
Trigger: TTGAGCAGTTTTGCCACCTCAGGGCCATCGGCGACG...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACGCCCCGGCCATTTCCTaGGCCCCAATTGTTCATAGG +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYAPAIS*APIVHR
Trigger: CCTATGAACAATTGGGGCTCAGGAAATGGCCGGGGC...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCGCAGGTAGCCGCGTTTaGAGACTTCCTCCCCGACGG +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFAGSRV*RLPPRR
Trigger: CCGTCGGGGAGGAAGTCTGCAAACGCGGCTACCTGC...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAGGGGCTTCTGCAGGGTaGCGGGGACGTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKGASAG*RGRAGL
Trigger: CAGCCCAGCACGTCCCCGGCACCCTGCAGAAGCCCC...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAGTGGGGACCTCGAGCTaGACCTTCTGGGATCTCTGC +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKVGTSS*TFWDLC
Trigger: GCAGAGATCCCAGAAGGTGCAGCTCGAGGTCCCCAC...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTCTGCTTTTGAGTGGGTaGATAATGGGGAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPLLLSG*IMGSVA
Trigger: TGCCACACTCCCCATTATGCACCCACTCAAAAGCAG...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAATCTTTATAGAAGGGTaGCTCCGCCGCCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKIFIEG*LRRRCR
Trigger: GCGGCAGCGGCGGCGGAGCCACCCTTCTATAAAGAT...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACGCCGCAGCTACAACTTaGCTGAGGGCTAAAGTCGGC +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYAAATT*LRAKVG
Trigger: GCCGACTTTAGCCCTCAGCCAAGTTGTAGCTGCGGC...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAACCGGCGACTGCGAGGTaGTGGTTCCGGAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKPATAR*WFRSGS
Trigger: GCTGCCGCTCCGGAACCACCACCTCGCAGTCGCCGG...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACGCAGGACTCCCACAGTaGCCCTCACCTTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYAGLPQ*PSPFQP
Trigger: TGGCTGAAAAGGTGAGGGCCACTGTGGGAGTCCTGC...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTCTTGCAGAATTAATGTaGAGAGCTGTCACCCCCACC +
Preference number: 4 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPLAELM*RAVTPT
Trigger: GGTGGGGGTGACAGCTCTCCACATTAATTCTGCAAG...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACTCGCTTGGTCGCGAGTaGAGGAGCAACTCGCCATGG +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYSLGRE*RSNSPW
Trigger: CCATGGCGAGTTGCTCCTTCACTCGCGACCAAGCGA...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACAGCACTGGTATAGGGTaGTCACGCGCCGCGGTGGAA +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYSTGIG*SRAAVE
Trigger: TTCCACCGCGGCGCGTGATCACCCTATACCAGTGCT...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACCCAGCCCCCTGGGTTTaGCTATTACCTGCCACACAT +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYPAPWV*LLPATH
Trigger: ATGTGTGGCAGGTAATAGTCAAACCCAGGGGGCTGG...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTTTCTTTGGGGGCTCATaGTCTGAAGGCTTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPFFGGS*SEGFEG
Trigger: ACCTTCAAAGCCTTCAGATCATGAGCCCCCAAAGAA...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACGCTGTGTACTGGGAGTaGTCAACATCTGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYAVYWE*STSGEA
Trigger: GGCTTCGCCAGATGTTGATCACTCCCAGTACACAGC...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACAAGTACCAGCTTTCCTaGTCCGACTCGTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYKYQLS*SDSFSA
Trigger: GGCCGAGAACGAGTCGGAGCAGGAAAGCTGGTACTT...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACCACCACCTGAACCGTaGCCACCTGCGGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGPPPEP*PPAVPW
Trigger: CCAGGGCACCGCAGGTGGGCACGGTTCAGGTGGTGG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAATCCAGCAGCTGCGGCTaGTGCGCCGATGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKSSSCG*CADARG
Trigger: GCCCCGGGCATCGGCGCAGCAGCCGCAGCTGCTGGA...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGGTCAAATCCAGCAGCTaGGGCTGCTGCGCCGATGCC +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWVKSSS*GCCADA
Trigger: GGCATCGGCGCAGCAGCCGCAGCTGCTGGATTTGAC...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp AATAATATTCATATCCATTCTCAAGTTGTCACCACACCCTCTTTTAGAAGGGTGTTCCGGAGCGGCAGCTaGAGCGGCAGCCCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: NNIHIHSQVVTTPSFRRVFRSGS*SGSPAS
Trigger: GCTGGCGGGGCTGCCGCTGCAGCTGCCGCTCCGGAA...CACCCTTCTAAAAGAGGGTGTGGTGACAACTTGAGAATGGATATGAATATTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTCAACTGTTACATCTGTaGTGTACCCTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPQLLHL*CTLCTL
Trigger: CAGGGTACAGAGGGTACAGCACAGATGTAACAGTTG...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAAGCAGGGTTAACAGGTaGGCGCCGATGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKSRVNR*APMLML
Trigger: CAGCATCAGCATCGGCGCCCACCTGTTAACCCTGCT...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGCCACCTCCAGGTCTCTaGCCACCACCTGAACCGTGC +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWPPPGL*PPPEPC
Trigger: GCACGGTTCAGGTGGTGGCCAGAGACCTGGAGGTGG...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCCCACCGGCAACGTCTTaGGCTCCCCTTACTGCTTCG +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFPPATS*APLTAS
Trigger: CGAAGCAGTAAGGGGAGCCCAAGACGTTGCCGGTGG...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGATCTCTCCGGGGGTCTTaGCACCCGGCGACTGCGAGG +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGSLRGS*HPATAR
Trigger: CCTCGCAGTCGCCGGGTGCCAAGACCCCCGGAGAGA...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAAGGGTAAGCTGCCCCTaGAGTCAGGTCTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKRVSCP*SQVFLQ
Trigger: CTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCT...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACAAAGCGGGACCTTCTaGGCCAGCCTCCCGGCTCGA +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGQSGTF*ASLPAR
Trigger: TCGAGCCGGGAGGCTGGCTCAGAAGGTCCCGCTTTG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTCCCAGTCATCATTTCTaGGGGAAGATGTATGTGAAG +
Preference number: 4 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPPSHHF*GKMYVK
Trigger: CTTCACATACATCTTCCCTCAGAAATGATGACTGGG...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACAGTGGAGCCCAAGAGTaGGCCAGGCATTGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYSGAQE*ARHCAE
Trigger: CTCTGCACAATGCCTGGCTCACTCTTGGGCTCCACT...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCCTCAGCTCTTTTCTGTaGCCCAGCCCCCTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFLSSFL*PSPLGL
Trigger: CAAACCCAGGGGGCTGGGGCACAGAAAAGAGCTGAG...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGGTCCACAGCGACGGATaGTCAGGAGCTGGACGACCA +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWVHSDG*SGAGRP
Trigger: TGGTCGTCCAGCTCCTGAGCATCCGTCGCTGTGGAC...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAAGCAGCTGCGGCTGCTaGGCCGATGCCCGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRSSCGC*ADARGC
Trigger: GCAGCCCCGGGCATCGGCGCAGCAGCCGCAGCTGCT...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGATCCAGCAGCTGCGGCTaGTGCGCCGATGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRSSSCG*CADARG
Trigger: GCCCCGGGCATCGGCGCAGCAGCCGCAGCTGCTGGA...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAGCCCTCTATGGGCCCTaGAGGACTCCCACAGTGGCC +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGALYGP*RTPTVA
Trigger: GGCCACTGTGGGAGTCCTGCAGGGCCCATAGAGGGC...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTGGCCACTTATGCATGTaGATTCCAGTCTTGAGTATC +
Preference number: 4 (lower is better)
Translates to: QGKLPLESGLPPALSCFPGHLCM*IPVLSI
Trigger: GATACTCAAGACTGGAATGCACATGCATAAGTGGCC...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACGGTGGACAGCATCTTTaGACGTGCGTGCACTGTTCT +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYGGQHL*TCVHCS
Trigger: AGAACAGTGCACGCACGTGCAAAGATGCTGTCCACC...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCCAGGAAAGGGAGGGTTaGGGGAAGAGGCTGTCTACC +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFQEREG*GKRLST
Trigger: GGTAGACAGCCTCTTCCCCCAACCCTCCCTTTCCTG...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372129.4
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCAGGGAGCCAGTGGCCGTaGAGAGCCACATGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAGSQWP*RATWLP
Trigger: CGGGAGCCATGTGGCTCTCCACGGCCACTGGCTCCC...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTTGTGCCGGAACTTCCTaGCATTTTCGTAGTATTCCA +
Preference number: 4 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPCAGTS*HFRSIP
Trigger: TGGAATACTACGAAAATGCCAGGAAGTTCCGGCACA...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGATCTTTATAGAAGGGTaGCTCCGCCGCCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWIFIEG*LRRRCR
Trigger: GCGGCAGCGGCGGCGGAGCCACCCTTCTATAAAGAT...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCCCGATGGCCCTGAGGTaGCAAAACTGCTCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFPMALR*QNCSKR
Trigger: CCGCTTTGAGCAGTTTTGCCACCTCAGGGCCATCGG...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACTGGCTACTGGAGCCTTaGCCATTTGAGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYWLLEP*PFEPWP
Trigger: TGGCCAGGGCTCAAATGGCCAAGGCTCCAGTAGCCA...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAACCGAGCTATGGCTACTaGAGCCTTGGCCATTTGAGC +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKPSYGY*SLGHLS
Trigger: GCTCAAATGGCCAAGGCTCCAGTAGCCATAGCTCGG...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACAGCTTACAAGAGGGGTaGCCACCCCTGGCCTCATTG +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYSLQEG*PPLASL
Trigger: CAATGAGGCCAGGGGTGGCCACCCCTCTTGTAAGCT...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCAGCTTACAAGAGGGGTaGCCACCCCTGGCCTCATTG +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFSLQEG*PPLASL
Trigger: CAATGAGGCCAGGGGTGGCCACCCCTCTTGTAAGCT...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCAGCGACTGCGAGGTGGTaGTTCCGGAGCGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAATARW*FRSGSC
Trigger: GCAGCTGCCGCTCCGGAACCACCACCTCGCAGTCGC...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp AATAATATTCATATCCATTCTCAAGTTGTCACCACACCCTCTTTTAGAAGGGTGCCGGCGACTGCGAGGTaGTGGTTCCGGAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: NNIHIHSQVVTTPSFRRVPATAR*WFRSGS
Trigger: GCTGCCGCTCCGGAACCACCACCTCGCAGTCGCCGG...CACCCTTCTAAAAGAGGGTGTGGTGACAACTTGAGAATGGATATGAATATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CAA 72 bp CCTTTTCAGCCAGAGAGAGACCAGGAAAGGGCATGTTaGCCTGAATTCAAGGGCACAAGTTTGGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: PFQPERDQERAC*PEFKGTSLAKG
Trigger: GCCCTTTGCCAAACTTGTGCCCTTGAATTCAGGCAAACATGCCCTTTCCTGGTCTCTCTCTGGCTGAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CAA 72 bp GGGTGGGGGCACAGGACTCTGAGTGCGAGGACAAGGTaGGTAAGCTTTCAAGACTGGAGGCATAAAACTTTA +
Preference number: 4 (lower is better)
Translates to: GWGHRTLSARTR*VSFQDWRHKTL
Trigger: TAAAGTTTTATGCCTCCAGTCTTGAAAGCTTACCAACCTTGTCCTCGCACTCAGAGTCCTGTGCCCCCACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CAA 72 bp CCTCAAAGGTCAGCTCAATCGTTTTACACCTGCCCTTaGTTAGCAGGCCCTGGGCCACTTATGCATGTGCAT +
Preference number: 4 (lower is better)
Translates to: PQRSAQSFYTCP*LAGPGPLMHVH
Trigger: ATGCACATGCATAAGTGGCCCAGGGCCTGCTAACAAAGGGCAGGTGTAAAACGATTGAGCTGACCTTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAAACGACCCGGTCCCAATaGGTGCGGTCGGGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKTTRSQ*VRSGFP
Trigger: CGGGAACCCCGACCGCACTCATTGGGACCGGGTCGT...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCACAAAGCGGGACCTTCTaGGCCAGCCTCCCGGCTCGA +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAQSGTF*ASLPAR
Trigger: TCGAGCCGGGAGGCTGGCTCAGAAGGTCCCGCTTTG...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATTCCCTGGCCACCACCTaGGCCATGCCCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ELTENYFDYTQSSFLREDSLATT*AMPTSR
Trigger: CCTGGAGGTGGGCATGGCTCAGGTGGTGGCCAGGGA...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTCACAAAAATAAAGTCTaGATCTTCCCCCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: QGKLPLESGLPPALSCFPHKNKV*IFPQTS
Trigger: GGAAGTCTGGGGGAAGATTCAGACTTTATTTTTGTG...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCACCCGGTCCCAATGAGTaGGGTCGGGGTTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAPGPNE*GRGSRG
Trigger: TCCTCGGGAACCCCGACCGCACTCATTGGGACCGGG...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAATCGGTACCTTGCATCTaGTCGCTGGCTCACGGAAAA +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKSVPCI*SLAHGK
Trigger: TTTTCCGTGAGCCAGCGAGCAGATGCAAGGTACCGA...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGGAGGTGTCGGTACCTTaGATCTGCTCGCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWEVSVP*ICSLAH
Trigger: GTGAGCCAGCGAGCAGATGCAAGGTACCGACACCTC...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTGTCGTCTCCCAAAACTaGAAACGAGATGTTTACAAG +
Preference number: 4 (lower is better)
Translates to: QGKLPLESGLPPALSCFPVVSQN*KRDVYK
Trigger: CTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGAC...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACCCTCTGCAAGCTAAGTaGAAGAAGGCTGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYPLQAK*KKAVYW
Trigger: CCAGTACACAGCCTTCTTGCACTTAGCTTGCAGAGG...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCACTGACCGGGAGCCAGTaGCCGTGGAGAGCCACATGG +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEALTGSQ*PWRATW
Trigger: CCATGTGGCTCTCCACGGCCACTGGCTCCCGGTCAG...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTTGCATCTGCTCGCTaGCTCACGGAAAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYLASAR*LTEKHW
Trigger: CCAGTGCTTTTCCGTGAGCCAGCGAGCAGATGCAAG...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACGGATGCTCAGGAGCTaGACGACCACGCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGRMLRS*TTTLAT
Trigger: AGTGGCCAGCGTGGTCGTCCAGCTCCTGAGCATCCG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCAGGGCCACAGGCTCGCTaGGTGTTACGAAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAGPQAR*VLRSAW
Trigger: CCAGGCGCTTCGTAACACCCAGCGAGCCTGTGGCCC...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCTTTCCTCCCGAGCTATaGCTACTGGAGCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFFPPEL*LLEPWP
Trigger: TGGCCAAGGCTCCAGTAGCCATAGCTCGGGAGGAAA...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCCATCTCTAGAGCACTaGTTTCCTCCTGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYPSLEH*FPPEPW
Trigger: CCAGGGCTCAGGAGGAAACCAGTGCTCTAGAGATGG...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCCCATCTCTAGAGCACTaGTTTCCTCCTGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFPSLEH*FPPEPW
Trigger: CCAGGGCTCAGGAGGAAACCAGTGCTCTAGAGATGG...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACCACCTCCAGGTCTCTaGCCACCACCTGAACCGTGC +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGPPPGL*PPPEPC
Trigger: GCACGGTTCAGGTGGTGGCCAGAGACCTGGAGGTGG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACCATCTCCAGGTCCCTaGCCACCACCTGAGCCATGC +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGPSPGP*PPPEPC
Trigger: GCATGGCTCAGGTGGTGGCCAGGGACCTGGAGATGG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAACCACCACCTGAGCCATaGCCATCTCCAGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKPPPEP*PSPGPW
Trigger: CCAGGGACCTGGAGATGGCCATGGCTCAGGTGGTGG...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAAGGGGTGGCCACCCCTaGCCTCATTGGCACGTATGG +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKRGGHP*PHWHVW
Trigger: CCATACGTGCCAATGAGGCCAGGGGTGGCCACCCCT...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACTGTCAGCAAGAGCCATaGCTGGTGTCATTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYCQQEP*LVSLLS
Trigger: ACTCAGCAATGACACCAGCCATGGCTCTTGCTGACA...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACCAGCATCATAGCGAATaGCACTGTCAGCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYQHHSE*HCQQEP
Trigger: TGGCTCTTGCTGACAGTGCCATTCGCTATGATGCTG...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAGAATCTGGTAGTCCTTaGGTAGAGGGAGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKESGSP*VEGAGV
Trigger: TACACCAGCTCCCTCTACTCAAGGACTACCAGATTC...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGCAGCTACAACTTGGCTaGGGGCTAAAGTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWQLQLG*GLKSAL
Trigger: CAGAGCCGACTTTAGCCCTCAGCCAAGTTGTAGCTG...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAGCGGCGCGGACACTGTaGCGGAACTTCCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKAARTL*RNFLAF
Trigger: AAATGCCAGGAAGTTCCGGCACAGTGTCCGCGCCGC...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGAAGTACCAGCTTTCCTaGTCCGACTCGTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWKYQLS*SDSFSA
Trigger: GGCCGAGAACGAGTCGGAGCAGGAAAGCTGGTACTT...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGCCGCTCTCCTTGACCTaGGCCCTCTGGGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLPLSLT*ALWAGA
Trigger: TGCACCTGCCCAGAGGGCGCAGGTCAAGGAGAGCGG...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCCCTCTGTACCCTGTCTaGTGGCAGCTTCTGAACCTA +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFPLYPV*WQLLNL
Trigger: TAGGTTCAGAAGCTGCCAGCAGACAGGGTACAGAGG...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACGGCAGTTATTCTTCTTaGCCCCAGGCTGTCACTGAC +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYGSYSS*PQAVTD
Trigger: GTCAGTGACAGCCTGGGGGCAAGAAGAATAACTGCC...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAATTGACCTGCGCCCTCTaGGCAGGTGCAGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKLTCAL*AGAVFL
Trigger: GAGGAAGACTGCACCTGCCCAGAGGGCGCAGGTCAA...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAGGGGACGTGCTGGGCTaGGTGCTAAGCGGCGAAAAA +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGGDVLG*VLSGEK
Trigger: TTTTTCGCCGCTTAGCACCCAGCCCAGCACGTCCCC...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCACCACCACCTGAGCCATaGCCATCTCCAGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAPPPEP*PSPGPW
Trigger: CCAGGGACCTGGAGATGGCCATGGCTCAGGTGGTGG...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCAAGGGGTGGCCACCCCTaGCCTCATTGGCACGTATGG +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEARGGHP*PHWHVW
Trigger: CCATACGTGCCAATGAGGCCAGGGGTGGCCACCCCT...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACAGTATCAGGTGCTTTTaGAGGACTCGGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYSIRCF*RTRSRW
Trigger: CCACCTGCTCCGAGTCCTCCAAAAGCACCTGATACT...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCAGTATCAGGTGCTTTTaGAGGACTCGGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFSIRCF*RTRSRW
Trigger: CCACCTGCTCCGAGTCCTCCAAAAGCACCTGATACT...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACAGGAGCTCCAACTTTTaGAGGAAGAGCCACCCTGAG +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYRSSNF*RKSHPE
Trigger: CTCAGGGTGGCTCTTCCTCCAAAAGTTGGAGCTCCT...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAACAGCATCATAGCGAATaGCACTGTCAGCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKQHHSE*HCQQEP
Trigger: TGGCTCTTGCTGACAGTGCCATTCGCTATGATGCTG...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCCAGCCTAGCTACAGGTaGTGGTTCAGAACATCGGCT +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFQPSYR*WFRTSA
Trigger: AGCCGATGTTCTGAACCACCACCTGTAGCTAGGCTG...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGCTCGAGGCTGTCTGTTaGAAAAGCAGAGACAGCGGC +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWLEAVC*KSRDSG
Trigger: GCCGCTGTCTCTGCTTTTCCAACAGACAGCCTCGAG...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGGCGACTGCGAGGTGGTaGTTCCGGAGCGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLATARW*FRSGSC
Trigger: GCAGCTGCCGCTCCGGAACCACCACCTCGCAGTCGC...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR CAA 72 bp CTTGGATCTGTACAACAAGGATCCCTACAAGGAAGGTaGCCTCTGCAAGCTAAGTGCAAGAAGGCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: LGSVQQGSLQGR*PLQAKCKKAVY
Trigger: GTACACAGCCTTCTTGCACTTAGCTTGCAGAGGCAACCTTCCTTGTAGGGATCCTTGTTGTACAGATCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CAA 72 bp CAGGCCCTGGGCCACTTATGCATGTGCATTCCAGTCTaGAGTATCTGGATACAAACTCTATGGAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: QALGHLCMCIPV*SIWIQTLWRSA
Trigger: AGCTGATCTCCATAGAGTTTGTATCCAGATACTCAAGACTGGAATGCACATGCATAAGTGGCCCAGGGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGATTCGGACTCGGAGTCTaGCCGGGAGCCAGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRFGLGV*PGASGR
Trigger: ACGGCCACTGGCTCCCGGTCAGACTCCGAGTCCGAA...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAGCATTAGCAACAGGTTaGAACCAGCGGGCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKALATG*NQRAEA
Trigger: CGCCTCTGCCCGCTGGTTTCAACCTGTTGCTAATGC...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTTTTTGCCTACTGTGCTaGTTTAGATCAGAATACCAA +
Preference number: 4 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPFCLLC*FRSEYQ
Trigger: TTGGTATTCTGATCTAAATCAGCACAGTAGGCAAAA...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTTATTCAGCCAGAAGTTaGAAGGTACCCTCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: QGKLPLESGLPPALSCFPYSARS*KVPSKN
Trigger: ATTTTTAGAGGGTACCTTTCAACTTCTGGCTGAATA...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGTCGGTACCTTGCATCTaGTCGCTGGCTCACGGAAAA +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWSVPCI*SLAHGK
Trigger: TTTTCCGTGAGCCAGCGAGCAGATGCAAGGTACCGA...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAGAGGTGTCGGTACCTTaGATCTGCTCGCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKEVSVP*ICSLAH
Trigger: GTGAGCCAGCGAGCAGATGCAAGGTACCGACACCTC...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTAGGCACCAAGCCCAGGTaGCTCCTAGCGGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVGTKPR*LLADSR
Trigger: CCTGCTGTCCGCTAGGAGGCACCTGGGCTTGGTGCC...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGATTGTTCGGGGCTTCTaGAGGGTGCCGGGGACGTGC +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLIVRGF*RVPGTC
Trigger: GCACGTCCCCGGCACCCTGCAGAAGCCCCGAACAAT...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCCTTCCTGATCTTCTTTaGCCTGGGGATTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFLPDLL*PGDCLP
Trigger: AGGAAGGCAATCCCCAGGGCAAAGAAGATCAGGAAG...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp AATAATATTCATATCCATTCTCAAGTTGTCACCACACCCTCTTTTAGAAGGGTGGTCAAATCCAGCAGCTaGGGCTGCTGCGCCGATGCC +
Preference number: 4 (lower is better)
Translates to: NNIHIHSQVVTTPSFRRVVKSSS*GCCADA
Trigger: GGCATCGGCGCAGCAGCCGCAGCTGCTGGATTTGAC...CACCCTTCTAAAAGAGGGTGTGGTGACAACTTGAGAATGGATATGAATATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCTACTGGAATGAAAACTaGTGGGGTCCATCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFYWNEN*WGPSLP
Trigger: GGGAAGGGATGGACCCCAGCAGTTTTCATTCCAGTA...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGGCACAGGACTCTGAGTaGGAGGACAAGGTTGGTAAG +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWAQDSE*EDKVGK
Trigger: CTTACCAACCTTGTCCTCGCACTCAGAGTCCTGTGC...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAACCGTGGAGAGCCACATaGCTCCCGGACAAGACGACC +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKPWRAT*LPDKTT
Trigger: GGTCGTCTTGTCCGGGAGCCATGTGGCTCTCCACGG...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTACTGACCGGGAGCCAGTaGCCGTGGAGAGCCACATGG +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVLTGSQ*PWRATW
Trigger: CCATGTGGCTCTCCACGGCCACTGGCTCCCGGTCAG...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACGCGAAGTATTCGTCTTaGGTGAAAAGAGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYAKYSS*VKRAMR
Trigger: CCTCATTGCTCTTTTCACCCAAGACGAATACTTCGC...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGGGGCCACAGGCTCGCTaGGTGTTACGAAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLGPQAR*VLRSAW
Trigger: CCAGGCGCTTCGTAACACCCAGCGAGCCTGTGGCCC...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGGCAGTCTTCCTCGCCTaGAGTGGGCCACAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLAVFLA*SGPQAR
Trigger: GCGAGCCTGTGGCCCACTCCAGGCGAGGAAGACTGC...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCATTGACCTGCGCCCTCTaGGCAGGTGCAGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEALTCAL*AGAVFL
Trigger: GAGGAAGACTGCACCTGCCCAGAGGGCGCAGGTCAA...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAACCCTCGCCTGAACACTaGTTTCCTCCCGAGCTATGG +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKPSPEH*FPPELW
Trigger: CCATAGCTCGGGAGGAAACCAGTGTTCAGGCGAGGG...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATCCATCTCCAGGTCCCTaGCCACCACCTGAGCCATGC +
Preference number: 4 (lower is better)
Translates to: ELTENYFDYTQSSFLREDPSPGP*PPPEPC
Trigger: GCATGGCTCAGGTGGTGGCCAGGGACCTGGAGATGG...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACGTGGTGGGCTCACTCTaGGAAACATCATCATGTACC +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYVVGSL*ETSSCT
Trigger: GGTACATGATGATGTTTCCCAGAGTGAGCCCACCAC...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCAGAGACAGCGGCTCTaGCTGCTGCAAAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYQRQRL*LLQRNF
Trigger: AAAGTTTCTTTGCAGCAGCCAGAGCCGCTGTCTCTG...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGAGCAGGGAGGGGCCTTaGGAAGAGACTTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWSREGP*EETFEE
Trigger: CTCTTCAAAAGTCTCTTCCCAAGGCCCCTCCCTGCT...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAACTGTACCCTGTCTGCTaGCAGCTTCTGAACCTAATA +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKLYPVC*QLLNLI
Trigger: TATTAGGTTCAGAAGCTGCCAGCAGACAGGGTACAG...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAGTGTCATGTGTTGGGTaGAGTGCTGGACTTGAAATC +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKVSCVG*SAGLEI
Trigger: GATTTCAAGTCCAGCACTCCACCCAACACATGACAC...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGACCCCTGTGATCAACTaGAGCTCACATAAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWTPVIN*SSHKQG
Trigger: CCCCTGCTTATGTGAGCTCCAGTTGATCACAGGGGT...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCACAGAGGAGACTGCCTaGGCATGGACATGGTTAATC +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFTEETA*AWTWLI
Trigger: GATTAACCATGTCCATGCCCAGGCAGTCTCCTCTGT...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp AATAATATTCATATCCATTCTCAAGTTGTCACCACACCCTCTTTTAGAAGGGTGGCTCTCCCGGACCGATaGCAGTGGACCTGCCTACTT +
Preference number: 4 (lower is better)
Translates to: NNIHIHSQVVTTPSFRRVALPDR*QWTCLL
Trigger: AAGTAGGCAGGTCCACTGTCATCGGTCCGGGAGAGC...CACCCTTCTAAAAGAGGGTGTGGTGACAACTTGAGAATGGATATGAATATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGCGTCGCCGATGGCCCTaGGGTGGCAAAACTGCTCAA +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLRRRWP*GGKTAQ
Trigger: TTGAGCAGTTTTGCCACCTCAGGGCCATCGGCGACG...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCAAATCCATTCTCACGTaGGTGTCGTCGTCGTTGTCA +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFKSILT*VSSSLS
Trigger: TGACAACGACGACGACACTCACGTGAGAATGGATTT...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACGATGAGGTTTGCCAATaGTGGTACAGCAAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYDEVCQ*WYSKPR
Trigger: TCTTGGCTTGCTGTACCATCATTGGCAAACCTCATC...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCAGCTGGATGAAGCACTaGGTGGGAACAGTACATTTC +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFSWMKH*VGTVHF
Trigger: GAAATGTACTGTTCCCACTCAGTGCTTCATCCAGCT...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACAAATTTGCAGCTGGATaGAGCACTGAGTGGGAACAG +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYKFAAG*STEWEQ
Trigger: CTGTTCCCACTCAGTGCTTCATCCAGCTGCAAATTT...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGGCGGCGCGGACACTGTaGCGGAACTTCCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLAARTL*RNFLAF
Trigger: AAATGCCAGGAAGTTCCGGCACAGTGTCCGCGCCGC...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACTCCAAGAAGAAATACTaGTCCGAGTGTCCACAGCGA +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYSKKKY*SECPQR
Trigger: TCGCTGTGGACACTCGGAGCAGTATTTCTTCTTGGA...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAACACAGTCATCGACCTaGATCCAGAGCTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGTQSST*IQSSPG
Trigger: TCCGGGAGAGCTCTGGATGCAGGTCGATGACTGTGT...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAATTGTTCGGGGCTTCTaGAGGGTGCCGGGGACGTGC +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRIVRGF*RVPGTC
Trigger: GCACGTCCCCGGCACCCTGCAGAAGCCCCGAACAAT...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAACTTTGCCCTGGGGATTaGCTTCCTCCCCAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKLCPGD*LPPQSC
Trigger: GCAACTTTGGGGAGGAAGGCAATCCCCAGGGCAAAG...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGCTTCCTGATCTTCTTTaGCCTGGGGATTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWLPDLL*PGDCLP
Trigger: AGGAAGGCAATCCCCAGGGCAAAGAAGATCAGGAAG...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCAAGGAAGGTTGCCTCTaGAAGCTAAGTGCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFKEGCL*KLSARR
Trigger: CCTTCTTGCACTTAGCTTGCAGAGGCAACCTTCCTT...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTGATTCATATTGCCATTaGTTTCCTATAACACCTACA +
Preference number: 4 (lower is better)
Translates to: QGKLPLESGLPPALSCFPDSYCH*FPITPT
Trigger: TGTAGGTGTTATAGGAAAGCAATGGCAATATGAATC...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGAGTCTTCTTGTCGCTTaGTCGCGAGTGAAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWSLLVA*SRVKEQ
Trigger: TTGCTCCTTCACTCGCGACCAAGCGACAAGAAGACT...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAGGAAAGAAGCGGGGTaGTCACCACTGCTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGRKEAG*SPLLLE
Trigger: CTCTAGCAGCAGTGGTGACCACCCCGCTTCTTTCCT...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGACCGTGGAGAGCCACATaGCTCCCGGACAAGACGACC +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRPWRAT*LPDKTT
Trigger: GGTCGTCTTGTCCGGGAGCCATGTGGCTCTCCACGG...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACTTGCATCTGCTCGCTaGCTCACGGAAAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGLASAR*LTEKHW
Trigger: CCAGTGCTTTTCCGTGAGCCAGCGAGCAGATGCAAG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTAGCTGGACGACCACGCTaGCCACTTCGGTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVAGRPR*PLRCSA
Trigger: GGCTGAACACCGAAGTGGCCAGCGTGGTCGTCCAGC...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGACGGATGCTCAGGAGCTaGACGACCACGCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRRMLRS*TTTLAT
Trigger: AGTGGCCAGCGTGGTCGTCCAGCTCCTGAGCATCCG...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCACCGATGGCCCTGAGGTaGCAAAACTGCTCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAPMALR*QNCSKR
Trigger: CCGCTTTGAGCAGTTTTGCCACCTCAGGGCCATCGG...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCACCCTCGCCTGAACACTaGTTTCCTCCCGAGCTATGG +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAPSPEH*FPPELW
Trigger: CCATAGCTCGGGAGGAAACCAGTGTTCAGGCGAGGG...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGACCACCTGCGGTGCCCTaGCCATCTCTAGAGCACTGG +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRPPAVP*PSLEHW
Trigger: CCAGTGCTCTAGAGATGGCCAGGGCACCGCAGGTGG...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTACCACCTGCGGTGCCCTaGCCATCTCTAGAGCACTGG +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVPPAVP*PSLEHW
Trigger: CCAGTGCTCTAGAGATGGCCAGGGCACCGCAGGTGG...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCACACCCCTGGCCTCATTaGCACGTATGGGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAHPWPH*HVWVIL
Trigger: GAGGATGACCCATACGTGCCAATGAGGCCAGGGGTG...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAACTCGGAGCAGGTGGTaGGCTCACTCTGGGAAACAT +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKTRSRW*AHSGKH
Trigger: ATGTTTCCCAGAGTGAGCCCACCACCTGCTCCGAGT...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAGTCGTTTGCTGGATTTaGAAATGGCACTCCAAACTC +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKVVCWI*KWHSKL
Trigger: GAGTTTGGAGTGCCATTTCCAAATCCAGCAAACGAC...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCGTTCAGAACATCGGCTaGGGGAGAGAGAAATATCCA +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFVQNIG*GREKYP
Trigger: TGGATATTTCTCTCTCCCCCAGCCGATGTTCTGAAC...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGCCACCGGCAACGTCTTaGGCTCCCCTTACTGCTTCG +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLPPATS*APLTAS
Trigger: CGAAGCAGTAAGGGGAGCCCAAGACGTTGCCGGTGG...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACAGCCCACCATCCCTTTaGTTGGTAGGCAAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYSPPSL*LVGKEK
Trigger: TTTTTCCTTGCCTACCAACCAAAGGGATGGTGGGCT...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTTGTCTAGGTATTCCTTaGGAAGTCAGAATTTATTCA +
Preference number: 4 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPCLGIP*EVRIYS
Trigger: TGAATAAATTCTGACTTCCCAAGGAATACCTAGACA...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACCACTATCTAAGAGTCTaGCAGCACCTCTTAGAGAAA +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYHYLRV*QHLLEK
Trigger: TTTCTCTAAGAGGTGCTGCCAGACTCTTAGATAGTG...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTATGGCGAAGCCCTCTATaGGCCCTGCAGGACTCCCAC +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVWRSPL*ALQDSH
Trigger: GTGGGAGTCCTGCAGGGCCCATAGAGGGCTTCGCCA...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCCCCACCCAGACTCCTaGGCTCAAGGATTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYPHPDS*AQGFLK
Trigger: TTTTAAAAATCCTTGAGCCCAGGAGTCTGGGTGGGG...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CAA 72 bp TCAAGACCTTTGTACCTATTCTCTGTGGTCACCACCTaGCTAGTGTCACGTTCTCAAAGGTCCAGGTACCTA +
Preference number: 4 (lower is better)
Translates to: SRPLYLFSVVTT*LVSRSQRSRYL
Trigger: TAGGTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAGGTACAAAGGTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR CAA 72 bp ACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTaGTACCTATTCTCTGTGGTCACCACCTTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: TTEQSSKQASRP*YLFSVVTTLLV
Trigger: CACTAGCAAGGTGGTGACCACAGAGAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
3UTR CAA 72 bp ATGAGGTTTGCCAATGATGGTACAGCAAGCCAAGATTaGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: MRFANDGTASQD*CATTEQSSKQA
Trigger: AGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATGCCCCGGCCATTTCCTaGGCCCCAATTGTTCATAGG +
Preference number: 4 (lower is better)
Translates to: ELTENYFDYTQSSFLREDAPAIS*APIVHR
Trigger: CCTATGAACAATTGGGGCTCAGGAAATGGCCGGGGC...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTATCCCTGTCCCTCGCCTaGACACTGGTTTCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVSLSLA*TLVSSR
Trigger: TCGGGAGGAAACCAGTGTTCAGGCGAGGGACAGGGA...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAACACAAAAATAAAGTCTaGATCTTCCCCCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKHKNKV*IFPQTS
Trigger: GGAAGTCTGGGGGAAGATTCAGACTTTATTTTTGTG...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACGGCTGGTGTCATTGCTaGGTTGAAAATTACTTCAAT +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYGWCHC*VENYFN
Trigger: ATTGAAGTAATTTTCAACTCAGCAATGACACCAGCC...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGAAATCCATTCTCACGTaGGTGTCGTCGTCGTTGTCA +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWKSILT*VSSSLS
Trigger: TGACAACGACGACGACACTCACGTGAGAATGGATTT...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACTTGGGAGAGTCGAACTaGTTATCACGTCTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYLGESN*LSRLAK
Trigger: TTTTGCCAGACGTGATAATCAGTTCGACTCTCCCAA...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAAAACACACCCAACTGTaGTATGATGAGGTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKKHTQL*YDEVCQ
Trigger: TTGGCAAACCTCATCATATCACAGTTGGGTGTGTTT...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACTTTTTCTTAGCAGCATaGACTGATAGCTGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYFFLAA*TDSWKV
Trigger: TACCTTCCAGCTATCAGTTCATGCTGCTAAGAAAAA...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACCCTGCAAAGGAGACTTaGAATTCCCATCTGTTTAAT +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYPAKET*NSHLFN
Trigger: ATTAAACAGATGGGAATTTCAAGTCTCCTTTGCAGG...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp AATAATATTCATATCCATTCTCAAGTTGTCACCACACCCTCTTTTAGAAGGGTGCCCCCAGGCTGTCACTaGCATTTCTGGTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: NNIHIHSQVVTTPSFRRVPPGCH*HFWWTA
Trigger: TGCTGTCCACCAGAAATGTCAGTGACAGCCTGGGGG...CACCCTTCTAAAAGAGGGTGTGGTGACAACTTGAGAATGGATATGAATATTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTAGTCCACAGCGACGGATaGTCAGGAGCTGGACGACCA +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVVHSDG*SGAGRP
Trigger: TGGTCGTCCAGCTCCTGAGCATCCGTCGCTGTGGAC...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAATCCAAAAACAGCTCATaGATGTTTTGGGCAACCACA +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKSKNSS*MFWATT
Trigger: TGTGGTTGCCCAAAACATGCATGAGCTGTTTTTGGA...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAACTGAGGTGGCAAAACTaGTCAAAGCGGGACCTTCTG +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKLRWQN*SKRDLL
Trigger: CAGAAGGTCCCGCTTTGAGCAGTTTTGCCACCTCAG...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGCTGTCAGCTTCTCTCTaGTCATGTGTGGGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWLSASL*SCVGFC
Trigger: ACAAAAGCCCACACATGAGCAGAGAGAAGCTGACAG...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGTGGGTTCAGCAATTATaGCCCACGAATCTGGTAGTC +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWWVQQL*PTNLVV
Trigger: GACTACCAGATTCGTGGGGCATAATTGCTGAACCCA...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAATCCTGCTCTTCTTCCTaGAGCAGCCTAGCTACAGGT +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKSCSSS*SSLATG
Trigger: ACCTGTAGCTAGGCTGCTGCAGGAAGAAGAGCAGGA...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACCTCTGTACCCTGTCTaGTGGCAGCTTCTGAACCTA +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGPLYPV*WQLLNL
Trigger: TAGGTTCAGAAGCTGCCAGCAGACAGGGTACAGAGG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACATCTACTTGCCTGACTaGCAAAAGCAAGTTCACTTT +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYIYLPD*QKQVHF
Trigger: AAAGTGAACTTGCTTTTGGCAGTCAGGCAAGTAGAT...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACATGGTTAATCAACTCTaGTGGCTGCCTGTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYMVNQL*WLPVRN
Trigger: ATTCCTCACAGGCAGCCAGCAGAGTTGATTAACCAT...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGGTATTCCAGCCGAGCTaGGGCGTCAGCAGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLVFQPS*GVSSLE
Trigger: CTCGAGACTGCTGACGCCCCAGCTCGGCTGGAATAC...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTAGGGGACGTGCTGGGCTaGGTGCTAAGCGGCGAAAAA +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVGDVLG*VLSGEK
Trigger: TTTTTCGCCGCTTAGCACCCAGCCCAGCACGTCCCC...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAGGAGGTGGTGGAGGTaGTGGCATTTGCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGRRWWR*WHLLLL
Trigger: AAGCAACAGCAAATGCCACCACCTCCACCACCTCCT...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAAGGAGGTGGTGGAGGTaGTGGCATTTGCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKRRWWR*WHLLLL
Trigger: AAGCAACAGCAAATGCCACCACCTCCACCACCTCCT...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAAAAAGCTCTGGCTCTGTaGGGACCTCGAGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKKALAL*GPRAAP
Trigger: AGGTGCAGCTCGAGGTCCCCACAGAGCCAGAGCTTT...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp AATAATATTCATATCCATTCTCAAGTTGTCACCACACCCTCTTTTAGAAGGGTGAAAGCTCTGGCTCTGTaGGGACCTCGAGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: NNIHIHSQVVTTPSFRRVKALAL*GPRAAP
Trigger: AGGTGCAGCTCGAGGTCCCCACAGAGCCAGAGCTTT...CACCCTTCTAAAAGAGGGTGTGGTGACAACTTGAGAATGGATATGAATATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACTTCATCAAAAGCTCTaGCTCTGTGGGGACCTCGAG +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGLHQKL*LCGDLE
Trigger: CTCGAGGTCCCCACAGAGCCAGAGCTTTTGATGAAG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAAAGGACTCGGAGCAGGTaGTGGGCTCACTCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKRTRSR*WAHSGK
Trigger: TTTCCCAGAGTGAGCCCACCACCTGCTCCGAGTCCT...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATAGGACTCGGAGCAGGTaGTGGGCTCACTCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: ELTENYFDYTQSSFLREDRTRSR*WAHSGK
Trigger: TTTCCCAGAGTGAGCCCACCACCTGCTCCGAGTCCT...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAGGAGCTCCAACTTTTaGAGGAAGAGCCACCCTGAG +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGRSSNF*RKSHPE
Trigger: CTCAGGGTGGCTCTTCCTCCAAAAGTTGGAGCTCCT...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCATTTGCAGATGGGTTGTaGGCTCCAGGGTTCGAGCCA +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAFADGL*APGFEP
Trigger: TGGCTCGAACCCTGGAGCCCACAACCCATCTGCAAA...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCAGGCAAGGTTTGCAGATaGGTTGTGGGCTCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAGKVCR*VVGSRV
Trigger: AACCCTGGAGCCCACAACCCATCTGCAAACCTTGCC...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAAGCAGGGAGGGGCCTTaGGAAGAGACTTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKSREGP*EETFEE
Trigger: CTCTTCAAAAGTCTCTTCCCAAGGCCCCTCCCTGCT...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGAGCCCACCATCCCTTTaGTTGGTAGGCAAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWSPPSL*LVGKEK
Trigger: TTTTTCCTTGCCTACCAACCAAAGGGATGGTGGGCT...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACAGTCATTTCCTACAATaGGTTGTTTCACCACCATCA +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYSHFLQ*VVSPPS
Trigger: TGATGGTGGTGAAACAACCCATTGTAGGAAATGACT...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCAGGAGTGATCAACATCTaGCGAAGCCCTCTATGGGCC +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAGVINI*RSPLWA
Trigger: GGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCC...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGGCAGTGGCATCATTATaGCTCACTGCAGCCCCACCC +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLAVASL*LTAAPP
Trigger: GGGTGGGGCTGCAGTGAGCCATAATGATGCCACTGC...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAGCCTGGGCATGGACATaGTTAATCAACTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGAWAWT*LINSAG
Trigger: GCCAGCAGAGTTGATTAACCATGTCCATGCCCAGGC...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAAGCAACTCGCCATGGTaGTGCACGATGGTTTTAAGG +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKSNSPW*CTMVLR
Trigger: CCTTAAAACCATCGTGCATCACCATGGCGAGTTGCT...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGCAGCAGTCTCGAGTTTaGGCACGAAGTAGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLQQSRV*ARSSAC
Trigger: ACAGGCGCTACTTCGTGCTCAAACTCGAGACTGCTG...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp AATAATATTCATATCCATTCTCAAGTTGTCACCACACCCTCTTTTAGAAGGGTGCAGCAGTCTCGAGTTTaGGCACGAAGTAGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: NNIHIHSQVVTTPSFRRVQQSRV*ARSSAC
Trigger: ACAGGCGCTACTTCGTGCTCAAACTCGAGACTGCTG...CACCCTTCTAAAAGAGGGTGTGGTGACAACTTGAGAATGGATATGAATATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAATTCTGTCCCAAAGGTaGGCTCCGAAAAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKILSQR*APKRVW
Trigger: CCAAACCCTTTTCGGAGCTCACCTTTGGGACAGAAT...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAGAATCTGGTAGTCCTTaGGTAGAGGGAGCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGESGSP*VEGAGV
Trigger: TACACCAGCTCCCTCTACTCAAGGACTACCAGATTC...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAACCACACTGCGTTATTTaGTTAGGTTGGAAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKPHCVI*LGWKKR
Trigger: TCTCTTTTTCCAACCTAATCAAATAACGCAGTGTGG...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATCCGACTTGTTCTGCCTaGTCAAGCACAGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: ELTENYFDYTQSSFLREDPTCSA*SSTVGR
Trigger: TCTGCCCACTGTGCTTGATCAGGCAGAACAAGTCGG...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGTCCACGCTGCAAATGTaGGTTTGTGTATGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWSTLQM*VCVWQV
Trigger: AACTTGCCATACACAAACTCACATTTGCAGCGTGGA...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGCTCAGCTCTTTTCTGTaGCCCAGCCCCCTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLLSSFL*PSPLGL
Trigger: CAAACCCAGGGGGCTGGGGCACAGAAAAGAGCTGAG...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCACTTCCTCCCCAAAGTTaGCAGAGCCAGAACCAGACA +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEALPPQS*QSQNQT
Trigger: TGTCTGGTTCTGGCTCTGGCAACTTTGGGGAGGAAG...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACTTTATTAGTATCAGGTaGTTTTGGAGGACTCGGAGC +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYFISIR*FWRTRS
Trigger: GCTCCGAGTCCTCCAAAAGCACCTGATACTAATAAA...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACATAGGATCATTCAATTaGCAGAGTCCACTTGTAGGC +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYIGSFN*QSPLVG
Trigger: GCCTACAAGTGGACTCTGGCAATTGAATGATCCTAT...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACCCTACAAGGAAGGTTaGCTCTGCAAGCTAAGTGCA +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGPYKEG*LCKLSA
Trigger: TGCACTTAGCTTGCAGAGGCAACCTTCCTTGTAGGG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACAACTATGGTAAAAGCTaGAGCAACAATAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYNYGKS*SNNKDF
Trigger: GAAGTCCTTATTGTTGCTGCAGCTTTTACCATAGTT...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAGTCTTCTTGTCGCTTaGTCGCGAGTGAAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGSLLVA*SRVKEQ
Trigger: TTGCTCCTTCACTCGCGACCAAGCGACAAGAAGACT...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCACTCACGGAAAAGCACTaGTATAGGGTGATCACGCGC +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEALTEKH*YRVITR
Trigger: GCGCGTGATCACCCTATACCAGTGCTTTTCCGTGAG...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTAAGCAGGGTTAACAGGTaGGCGCCGATGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVSRVNR*APMLML
Trigger: CAGCATCAGCATCGGCGCCCACCTGTTAACCCTGCT...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACCATCTTTCACTTCTTTaGCTTCTTTGCATTCTTTCG +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYHLSLL*LLCILS
Trigger: CGAAAGAATGCAAAGAAGCCAAAGAAGTGAAAGATG...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGCACCCCTGGCCTCATTaGCACGTATGGGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLHPWPH*HVWVIL
Trigger: GAGGATGACCCATACGTGCCAATGAGGCCAGGGGTG...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAGTGGTGGGCTCACTCTaGGAAACATCATCATGTACC +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKVVGSL*ETSSCT
Trigger: GGTACATGATGATGTTTCCCAGAGTGAGCCCACCAC...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCACAGCCTAGCTACAGGTaGTGGTTCAGAACATCGGCT +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAQPSYR*WFRTSA
Trigger: AGCCGATGTTCTGAACCACCACCTGTAGCTAGGCTG...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACAGAGACAGCGGCTCTaGCTGCTGCAAAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGQRQRL*LLQRNF
Trigger: AAAGTTTCTTTGCAGCAGCCAGAGCCGCTGTCTCTG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTAGCCGCAGCTACAACTTaGCTGAGGGCTAAAGTCGGC +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVAAATT*LRAKVG
Trigger: GCCGACTTTAGCCCTCAGCCAAGTTGTAGCTGCGGC...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATTTTGCAGATGGGTTGTaGGCTCCAGGGTTCGAGCCA +
Preference number: 4 (lower is better)
Translates to: ELTENYFDYTQSSFLREDFADGL*APGFEP
Trigger: TGGCTCGAACCCTGGAGCCCACAACCCATCTGCAAA...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATGGCAAGGTTTGCAGATaGGTTGTGGGCTCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: ELTENYFDYTQSSFLREDGKVCR*VVGSRV
Trigger: AACCCTGGAGCCCACAACCCATCTGCAAACCTTGCC...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGATGGAATGAAAACTGCTaGGGTCCATCCCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGWNENC*GPSLPF
Trigger: GAAGGGAAGGGATGGACCCCAGCAGTTTTCATTCCA...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGACTTCATCATGGAGGTaGGTGGGGGCACAGGACTCT +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLTSSWR*VGAQDS
Trigger: AGAGTCCTGTGCCCCCACCCACCTCCATGATGAAGT...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGTTACGAAGCGCCTGGTaGAAAGCATCTCGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLLRSAW*KASRLP
Trigger: GGGAAGACGAGATGCTTTTCACCAGGCGCTTCGTAA...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGACAGCTACAACTTGGCTaGGGGCTAAAGTCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRQLQLG*GLKSAL
Trigger: CAGAGCCGACTTTAGCCCTCAGCCAAGTTGTAGCTG...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTCAAAGCATATCTGTaGAGCAGAAATAGCAGATGT +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYLKAYL*SRNSRC
Trigger: ACATCTGCTATTTCTGCTTCACAGATATGCTTTGAG...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCAAAAGAGGTCTGAATTaGATCCTTTGGCAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFKRGLN*ILWQAK
Trigger: TTTGGCTTGCCAAAGGATTCAATTCAGACCTCTTTT...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAATGCCACTTACCTTTTTaGTCTTGGGAAAATTCTCAA +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKCHLPF*SWENSQ
Trigger: TTGAGAATTTTCCCAAGATCAAAAAGGTAAGTGGCA...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAAATCCCTGCACCCCTGTaGTCAACTGGAGCTCACATA +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKIPAPL*STGAHI
Trigger: TATGTGAGCTCCAGTTGATCACAGGGGTGCAGGGAT...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACGCCTCTATTACATTTTaGAGTCCGAAACAGCAGTAT +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYASITF*SPKQQY
Trigger: ATACTGCTGTTTCGGACTTCAAAATGTAATAGAGGC...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGTCTGCTGGCTGCCTGTaGGGAATATCAGCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLSAGCL*GISAGQ
Trigger: TTGCCCAGCTGATATTCCTCACAGGCAGCCAGCAGA...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTAACACAGTCATCGACCTaGATCCAGAGCTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVTQSST*IQSSPG
Trigger: TCCGGGAGAGCTCTGGATGCAGGTCGATGACTGTGT...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAGGCTCTGTATTCGTCTaGACACAAGGCTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKGSVFV*TQGSHL
Trigger: AAGATGAGAGCCTTGTGTGCAGACGAATACAGAGCC...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAACTGAGGTGGCAAAACTaGTCAAAGCGGGACCTTCTG +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKLRWQN*SKRDLL
Trigger: CAGAAGGTCCCGCTTTGAGCAGTTTTGCCACCTCAG...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCTGTAGAAATTTGGGTTaGTTTCTACTCAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFCRNLG*FLLRSL
Trigger: GAGGCTTCTGAGTAGAAAGCAACCCAAATTTCTACA...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACAAACTTGAAATAATCTaGCCTTTAGTCCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYKLEII*PLVLPL
Trigger: TAAAGGCAGGACTAAAGGGCAGATTATTTCAAGTTT...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAGCCAAGATTTGTGTaGCACCACGGAACAAAGCTC +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGKPRFV*HHGTKL
Trigger: GAGCTTTGTTCCGTGGTGGCACACAAATCTTGGCTT...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACAACACTATACAGAGTTaGAAAGTCGTCTCCCAAAAC +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYNTIQS*KVVSQN
Trigger: GTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTT...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTACATTCCAGGGTAAGCTaGCCCTGGAGTCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVHSRVS*PWSQVF
Trigger: GAAGACCTGACTCCAGGGGCAGCTTACCCTGGAATG...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAACCATATATAGCACATTaGATGTGCTTTAAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKPYIAH*MCFKRD
Trigger: GTCCCTTTTAAAGCACATGCAATGTGCTATATATGG...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACAAATTGATTATGGGATaGCAGTGTTACCTTAAGATC +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYKLIMG*QCYLKI
Trigger: GATCTTAAGGTAACACTGGCATCCCATAATCAATTT...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTATTTCCTCCCGAGCTATaGCTACTGGAGCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVFPPEL*LLEPWP
Trigger: TGGCCAAGGCTCCAGTAGCCATAGCTCGGGAGGAAA...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGCTTCATCAAAAGCTCTaGCTCTGTGGGGACCTCGAG +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLLHQKL*LCGDLE
Trigger: CTCGAGGTCCCCACAGAGCCAGAGCTTTTGATGAAG...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAACTCGGAGCAGGTGGTaGGCTCACTCTGGGAAACAT +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRTRSRW*AHSGKH
Trigger: ATGTTTCCCAGAGTGAGCCCACCACCTGCTCCGAGT...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCATGTCAGCAAGAGCCATaGCTGGTGTCATTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEACQQEP*LVSLLS
Trigger: ACTCAGCAATGACACCAGCCATGGCTCTTGCTGACA...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTACTCGAGGCTGTCTGTTaGAAAAGCAGAGACAGCGGC +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVLEAVC*KSRDSG
Trigger: GCCGCTGTCTCTGCTTTTCCAACAGACAGCCTCGAG...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCACCTGGTTATCACCTCTaGCAAGGTTTGCAGATGGGT +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAPGYHL*QGLQMG
Trigger: ACCCATCTGCAAACCTTGCCAGAGGTGATAACCAGG...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACCTGATCAAGCACAGTaGGCAGAGATCCAATCACAA +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGPDQAQ*AEIQSQ
Trigger: TTGTGATTGGATCTCTGCCCACTGTGCTTGATCAGG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACATAATCTGTCACCAGTaGGAAAATAACAGACTAAAC +
Preference number: 4 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYIICHQ*ENNRLN
Trigger: GTTTAGTCTGTTATTTTCCCACTGGTGACAGATTAT...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGTCCAGAAGGTGTGGCTaGCATCAAACATATTGTGAT +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWSRRCG*HQTYCD
Trigger: ATCACAATATGTTTGATGCCAGCCACACCTTCTGGA...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
3UTR CAA 72 bp ATTAAAATGCTAACCAAAGTCATTTCCTACAATGGGTaGTTTCACCACCATCAACACCACCACCACCACCAC +
Preference number: 4 (lower is better)
Translates to: IKMLTKVISYNG*FHHHQHHHHHH
Trigger: GTGGTGGTGGTGGTGGTGTTGATGGTGGTGAAACAACCCATTGTAGGAAATGACTTTGGTTAGCATTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp AATAATATTCATATCCATTCTCAAGTTGTCACCACACCCTCTTTTAGAAGGGTGAGCAACTCGCCATGGTaGTGCACGATGGTTTTAAGG +
Preference number: 4 (lower is better)
Translates to: NNIHIHSQVVTTPSFRRVSNSPW*CTMVLR
Trigger: CCTTAAAACCATCGTGCATCACCATGGCGAGTTGCT...CACCCTTCTAAAAGAGGGTGTGGTGACAACTTGAGAATGGATATGAATATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGTTACGAAGCGCCTGGTaGAAAGCATCTCGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLLRSAW*KASRLP
Trigger: GGGAAGACGAGATGCTTTTCACCAGGCGCTTCGTAA...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCACTGTCATTGTCCTTTaGGTCATCCTCTTTATTAGT +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFTVIVL*VILFIS
Trigger: ACTAATAAAGAGGATGACTCAAAGGACAATGACAGT...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATATTCTGTCCCAAAGGTaGGCTCCGAAAAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: ELTENYFDYTQSSFLREDILSQR*APKRVW
Trigger: CCAAACCCTTTTCGGAGCTCACCTTTGGGACAGAAT...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAATCTTGTTTCCAAGTCTaGCAGCTCCTACTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKSCFQV*QLLLFL
Trigger: AAGGAAGAGTAGGAGCTGTCAGACTTGGAAACAAGA...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCCTAATAATGCACAGATaGCTTCAATATCCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFLIMHR*LQYPWK
Trigger: TTTCCAGGGATATTGAAGTCATCTGTGCATTATTAG...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCAGGCTCTGTATTCGTCTaGACACAAGGCTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAGSVFV*TQGSHL
Trigger: AAGATGAGAGCCTTGTGTGCAGACGAATACAGAGCC...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGACTTCCTCCCCAAAGTTaGCAGAGCCAGAACCAGACA +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRLPPQS*QSQNQT
Trigger: TGTCTGGTTCTGGCTCTGGCAACTTTGGGGAGGAAG...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGATCCTGCTCTTCTTCCTaGAGCAGCCTAGCTACAGGT +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRSCSSS*SSLATG
Trigger: ACCTGTAGCTAGGCTGCTGCAGGAAGAAGAGCAGGA...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp AATAATATTCATATCCATTCTCAAGTTGTCACCACACCCTCTTTTAGAAGGGTGGACAGCGGCTCTGGCTaGTGCAAAGAAACTTTGAGA +
Preference number: 4 (lower is better)
Translates to: NNIHIHSQVVTTPSFRRVDSGSG*CKETLR
Trigger: TCTCAAAGTTTCTTTGCAGCAGCCAGAGCCGCTGTC...CACCCTTCTAAAAGAGGGTGTGGTGACAACTTGAGAATGGATATGAATATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTATTGGGCTCCCCTTACTaGTTCGGCATCAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVLGSPY*FGISSI
Trigger: AATGCTGCTGATGCCGAAGCAGTAAGGGGAGCCCAA...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGTGTAGAAATTTGGGTTaGTTTCTACTCAGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWCRNLG*FLLRSL
Trigger: GAGGCTTCTGAGTAGAAAGCAACCCAAATTTCTACA...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCAAAGCCAAGATTTGTGTaGCACCACGGAACAAAGCTC +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAKPRFV*HHGTKL
Trigger: GAGCTTTGTTCCGTGGTGGCACACAAATCTTGGCTT...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACAACTATAAGGCAATCTaGAACTGGAAAGCATTTCCT +
Preference number: 4 (lower is better)
Translates to: DLCATTEQSSKQASRPLYNYKAI*NWKAFP
Trigger: AGGAAATGCTTTCCAGTTGCAGATTGCCTTATAGTT...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCATGAAGAACGTCTATTaGTACACTGCTTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: CATTEQSSKQASRPLYLFMKNVY*YTAYSS
Trigger: GGAAGAATAAGCAGTGTAGCAATAGACGTTCTTCAT...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAACAGCAGTATTTCCTCTaGTCAGAGAAAGGTGAACCT +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKQQYFL*SEKGEP
Trigger: AGGTTCACCTTTCTCTGAGCAGAGGAAATACTGCTG...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGAGCAACTCAGAAGCTTaGTGGGTGGCAAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLSNSEA*WVAKES
Trigger: GCTTTCCTTTGCCACCCAGCAAGCTTCTGAGTTGCT...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAATGTGCCGGAACTTCCTaGCATTTTCGTAGTATTCCA +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKCAGTS*HFRSIP
Trigger: TGGAATACTACGAAAATGCCAGGAAGTTCCGGCACA...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGACTCACGGAAAAGCACTaGTATAGGGTGATCACGCGC +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRLTEKH*YRVITR
Trigger: GCGCGTGATCACCCTATACCAGTGCTTTTCCGTGAG...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAATCGAGCTGCACCTTCTaGGATCTCTGCATCTTTCAC +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKSSCTF*DLCIFH
Trigger: GTGAAAGATGCAGAGATCCCAGAAGGTGCAGCTCGA...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGATTGGCATATAATCACTaGAGCTTACAAGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGLAYNH*SLQEGW
Trigger: CCACCCCTCTTGTAAGCTCCAGTGATTATATGCCAA...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGATTTTGAGGAGCCATTaGCATATAATCACTGGAGCT +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWILRSH*HIITGA
Trigger: AGCTCCAGTGATTATATGCCAATGGCTCCTCAAAAT...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAGTCGTTTGCTGGATTTaGAAATGGCACTCCAAACTC +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKVVCWI*KWHSKL
Trigger: GAGTTTGGAGTGCCATTTCCAAATCCAGCAAACGAC...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAACAGCACTCAGAAAATaGGTCGACCACATAGATTCG +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKTALRK*VDHIDS
Trigger: CGAATCTATGTGGTCGACCCATTTTCTGAGTGCTGT...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGCCTGGTTATCACCTCTaGCAAGGTTTGCAGATGGGT +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLPGYHL*QGLQMG
Trigger: ACCCATCTGCAAACCTTGCCAGAGGTGATAACCAGG...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp AATAATATTCATATCCATTCTCAAGTTGTCACCACACCCTCTTTTAGAAGGGTGCAGGCAGCACAGCCTTaGATCTGTACAACAAGGATC +
Preference number: 4 (lower is better)
Translates to: NNIHIHSQVVTTPSFRRVQAAQP*ICTTRI
Trigger: GATCCTTGTTGTACAGATCCAAGGCTGTGCTGCCTG...CACCCTTCTAAAAGAGGGTGTGGTGACAACTTGAGAATGGATATGAATATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATGTGAGGAATATCAGCTaGGCAAAGACACAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ELTENYFDYTQSSFLREDVRNIS*AKTQGQ
Trigger: CTGCCCTTGTGTCTTTGCCCAGCTGATATTCCTCAC...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAGTTAATCAACTCTGCTaGCTGCCTGTGAGGAATATC +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKVNQLC*LPVRNI
Trigger: GATATTCCTCACAGGCAGCCAGCAGAGTTGATTAAC...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTAGCTGCAAAGAAACTTTaGGAACGGCTTTGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVAAKKL*ERLCGR
Trigger: ACGCCCACAAAGCCGTTCTCAAAGTTTCTTTGCAGC...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGAACTGGAACAATGACTaGTCTCATAGCCACGTCCTC +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLNWNND*SHSHVL
Trigger: GAGGACGTGGCTATGAGATCAGTCATTGTTCCAGTT...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAAAACTGGAACAATGACTaGTCTCATAGCCACGTCCTC +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKNWNND*SHSHVL
Trigger: GAGGACGTGGCTATGAGATCAGTCATTGTTCCAGTT...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAGTTATGCAGTACCTGTaGCTATGTGTACCTGTTACT +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGVMQYL*LCVPVT
Trigger: AGTAACAGGTACACATAGTCACAGGTACTGCATAAC...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGAGTTTAAAAGAGGTCTaGATTGAATCCTTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWSLKEV*IESFGK
Trigger: CTTGCCAAAGGATTCAATTCAGACCTCTTTTAAACT...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAGAAAACTGGTCCTTTTaGAAGTACTACAGGGACACA +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKENWSF*KYYRDT
Trigger: TGTGTCCCTGTAGTACTTTCAAAAGGACCAGTTTTC...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAGGCCAATATTAAAATaGGTTTACATTCCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGRPILK*VYIPGA
Trigger: TGCCCCGGGAATGTAAACTCATTTTAATATTGGCCT...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAATCCAAGAAGAAATACTaGTCCGAGTGTCCACAGCGA +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKSKKKY*SECPQR
Trigger: TCGCTGTGGACACTCGGAGCAGTATTTCTTCTTGGA...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAACTGTCAGCTTCTCTCTaGTCATGTGTGGGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKLSASL*SCVGFC
Trigger: ACAAAAGCCCACACATGAGCAGAGAGAAGCTGACAG...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTAGACAGCGGCTCTGGCTaGTGCAAAGAAACTTTGAGA +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVDSGSG*CKETLR
Trigger: TCTCAAAGTTTCTTTGCAGCAGCCAGAGCCGCTGTC...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAACAACTGTTACATCTGTaGTGTACCCTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKQLLHL*CTLCTL
Trigger: CAGGGTACAGAGGGTACAGCACAGATGTAACAGTTG...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAGTCGTCTCCCAAAACTaGAAACGAGATGTTTACAAG +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGVVSQN*KRDVYK
Trigger: CTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGAC...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAACAACATGCTATCCCTaGACCCCTGTGATCAACTGG +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRTTCYP*TPVINW
Trigger: CCAGTTGATCACAGGGGTGCAGGGATAGCATGTTGT...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAACAGCATCTTTGCACGTaGGTGCACTGTTCTACTTTC +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKQHLCT*VHCSTF
Trigger: GAAAGTAGAACAGTGCACGCACGTGCAAAGATGCTG...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGATATACAGAGGAGACTaGCTGGGCATGGACATGGTT +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLIYRGD*LGMDMV
Trigger: AACCATGTCCATGCCCAGGCAGTCTCCTCTGTATAT...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCAGCGAAGTATTCGTCTTaGGTGAAAAGAGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAAKYSS*VKRAMR
Trigger: CCTCATTGCTCTTTTCACCCAAGACGAATACTTCGC...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATAGCTCATGCATGTTTTaGGCAACCACACAGTCATCG +
Preference number: 4 (lower is better)
Translates to: ELTENYFDYTQSSFLREDSSCMF*ATTQSS
Trigger: CGATGACTGTGTGGTTGCCCAAAACATGCATGAGCT...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGATCGAGCTGCACCTTCTaGGATCTCTGCATCTTTCAC +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRSSCTF*DLCIFH
Trigger: GTGAAAGATGCAGAGATCCCAGAAGGTGCAGCTCGA...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGGGAAAATTCTCAACATaGGCTTCATTTCCAGTACTT +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWGKFST*ASFPVL
Trigger: AAGTACTGGAAATGAAGCCCATGTTGAGAATTTTCC...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTATCAAGGGCACAAGTTTaGCAAAGGGCACATGAGGGT +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVSRAQV*QRAHEG
Trigger: ACCCTCATGTGCCCTTTGCCAAACTTGTGCCCTTGA...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTATTTGTTAGCAGGCCCTaGGCCACTTATGCATGTGCA +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVFVSRP*ATYACA
Trigger: TGCACATGCATAAGTGGCCCAGGGCCTGCTAACAAA...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTACAGGGTGAAGAGCAGTaGCATCATTATGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVQGEEQ*HHYGSL
Trigger: CAGTGAGCCATAATGATGCCACTGCTCTTCACCCTG...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACCAGCATTATTCTCTTaGCTTTCTGCTTTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGPALFS*LSAFEW
Trigger: CCACTCAAAAGCAGAAAGCCAAGAGAATAATGCTGG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGATCTACTTTCTTCCAGTaGAGCCCAAGAGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRSTFFQ*SPRVSQ
Trigger: CTGGCTCACTCTTGGGCTCCACTGGAAGAAAGTAGA...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATGAGACTGCCTGGGCATaGACATGGTTAATCAACTCT +
Preference number: 4 (lower is better)
Translates to: ELTENYFDYTQSSFLREDETAWA*TWLINS
Trigger: AGAGTTGATTAACCATGTCCATGCCCAGGCAGTCTC...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGATTCTTTGGGGGCTCATaGTCTGAAGGCTTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRFFGGS*SEGFEG
Trigger: ACCTTCAAAGCCTTCAGATCATGAGCCCCCAAAGAA...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGAGGTTTGCCAATaGTGGTACAGCAAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRDEVCQ*WYSKPR
Trigger: TCTTGGCTTGCTGTACCATCATTGGCAAACCTCATC...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACCACACTGCGTTATTTaGTTAGGTTGGAAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGPHCVI*LGWKKR
Trigger: TCTCTTTTTCCAACCTAATCAAATAACGCAGTGTGG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGTTTGTGTTTGGGCAGTaGAGATTAACCAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLFVFGQ*RLTNSS
Trigger: GGAGGAGTTGGTTAATCTTCACTGCCCAAACACAAA...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGCTCACTCTGTTCATTTaGCAACATGCTATCCCTGCA +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLLTLFI*QHAIPA
Trigger: TGCAGGGATAGCATGTTGTCAAATGAACAGAGTGAG...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACCGTTCATTTTTATGTaGTTTCACCATCAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGPFIFM*FHHQQG
Trigger: ACCTTGCTGATGGTGAAATCACATAAAAATGAACGG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATCTTCTTCTACATGTTTaGCTCTGCCTTCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: ELTENYFDYTQSSFLREDLLLHV*LCLHQV
Trigger: AACCTGGTGAAGGCAGAGTCAAACATGTAGAAGAAG...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAAACCTTCTGGGATCTCTaGATCTTTCACTTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKTFWDL*IFHFFG
Trigger: GCCAAAGAAGTGAAAGATGCAGAGATCCCAGAAGGT...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATAGGAAAGGGCATGTTTaGCTGAATTCAAGGGCACAA +
Preference number: 4 (lower is better)
Translates to: ELTENYFDYTQSSFLREDRKGHV*LNSRAQ
Trigger: TTGTGCCCTTGAATTCAGGCAAACATGCCCTTTCCT...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTACAATCGTTTTACACCTaGCCTTTGTTAGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVQSFYT*PLLAGP
Trigger: AGGGCCTGCTAACAAAGGGCAGGTGTAAAACGATTG...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAAATCTTTGCACGTGCGTaGACTGTTCTACTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKIFARA*TVLLSS
Trigger: GGAAGAAAGTAGAACAGTGCACGCACGTGCAAAGAT...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGAGCTCATGCATGTTTTaGGCAACCACACAGTCATCG +
Preference number: 4 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLSSCMF*ATTQSS
Trigger: CGATGACTGTGTGGTTGCCCAAAACATGCATGAGCT...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAATTGGCATATAATCACTaGAGCTTACAAGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKLAYNH*SLQEGW
Trigger: CCACCCCTCTTGTAAGCTCCAGTGATTATATGCCAA...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGTTGAAGCTGCATCTTTaGGGTCCCAGTTATAGGAGA +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLLKLHL*GPSYRR
Trigger: TCTCCTATAACTGGGACCCCAAAGATGCAGCTTCAA...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAACTGATTATCACGTCTaGCAAAATCCATTCTCACGT +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGTDYHV*QNPFSR
Trigger: ACGTGAGAATGGATTTTGCCAGACGTGATAATCAGT...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAAGGAAGAGTGTGCATTaGGGAAAATGGAGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKRKSVH*GKWRKN
Trigger: ATTCTTTCTCCATTTTCCCCAATGCACACTCTTCCT...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGTGGTACATCTTATATTaGCTCAATATCCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWWYILY*LNIQKE
Trigger: TTCCTTCTGGATATTGAGCCAATATAAGATGTACCA...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTACTGTACCCTGTCTGCTaGCAGCTTCTGAACCTAATA +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVLYPVC*QLLNLI
Trigger: TATTAGGTTCAGAAGCTGCCAGCAGACAGGGTACAG...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGACCCTTTTTAATGGGTaGTATACTCTTCAGGTAATT +
Preference number: 4 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWTLFNG*YTLQVI
Trigger: AATTACCTGAAGAGTATACCACCCATTAAAAAGGGT...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATCTTTCTGCTTTTGAGTaGGTGCATAATGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: ELTENYFDYTQSSFLREDLSAFE*VHNGEC
Trigger: ACACTCCCCATTATGCACCCACTCAAAAGCAGAAAG...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGCATCATGTACCCTCTTaGATCTTCAAAAGGGGATCG +
Preference number: 4 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLHHVPS*IFKRGS
Trigger: CGATCCCCTTTTGAAGATTCAAGAGGGTACATGATG...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTACATCATGTACCCTCTTaGATCTTCAAAAGGGGATCG +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVHHVPS*IFKRGS
Trigger: CGATCCCCTTTTGAAGATTCAAGAGGGTACATGATG...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAACTGTCATTGTCCTTTaGGTCATCCTCTTTATTAGT +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKTVIVL*VILFIS
Trigger: ACTAATAAAGAGGATGACTCAAAGGACAATGACAGT...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTATTGGGAGAGTCGAACTaGTTATCACGTCTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVLGESN*LSRLAK
Trigger: TTTTGCCAGACGTGATAATCAGTTCGACTCTCCCAA...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCACTCAAAGCATATCTGTaGAGCAGAAATAGCAGATGT +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEALKAYL*SRNSRC
Trigger: ACATCTGCTATTTCTGCTTCACAGATATGCTTTGAG...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGAAGAGGCAAGGTAGTTaGGACTATGGAGACATCATC +
Preference number: 4 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLKRQGS*DYGDII
Trigger: GATGATGTCTCCATAGTCTCAACTACCTTGCCTCTT...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp AATAATATTCATATCCATTCTCAAGTTGTCACCACACCCTCTTTTAGAAGGGTGAACAGACTAAACACCTaGTTAAAGGGAGGTGTCATG +
Preference number: 4 (lower is better)
Translates to: NNIHIHSQVVTTPSFRRVNRLNT*LKGGVM
Trigger: CATGACACCTCCCTTTAATCAGGTGTTTAGTCTGTT...CACCCTTCTAAAAGAGGGTGTGGTGACAACTTGAGAATGGATATGAATATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGAAGGGCATGTTTGCCTaGATTCAAGGGCACAAGTTT +
Preference number: 4 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLKGMFA*IQGHKF
Trigger: AAACTTGTGCCCTTGAATTCAGGCAAACATGCCCTT...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGTGCATTATGGGAACTTaGGCCACAGATTTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLCIMGT*ATDLPL
Trigger: TAAAGGCAAATCTGTGGCTCAAGTTCCCATAATGCA...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAGCATTTGCTGTTGCTTaGTTTGAGTTAATTTGCCAA +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGAFAVA*FELICQ
Trigger: TTGGCAAATTAACTCAAAGCAAGCAACAGCAAATGC...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTAACCTTCTGGGATCTCTaGATCTTTCACTTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVTFWDL*IFHFFG
Trigger: GCCAAAGAAGTGAAAGATGCAGAGATCCCAGAAGGT...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCAAACACTATACAGAGTTaGAAAGTCGTCTCCCAAAAC +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEANTIQS*KVVSQN
Trigger: GTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTT...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGATTGAAGCTGCATCTTTaGGGTCCCAGTTATAGGAGA +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRLKLHL*GPSYRR
Trigger: TCTCCTATAACTGGGACCCCAAAGATGCAGCTTCAA...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGTTGAGTAGAGGGAGCTaGTGTATTGCTCTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLLSRGS*CIALSF
Trigger: AAAAGAGAGAGCAATACACCAGCTCCCTCTACTCAA...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGACAGCACTCAGAAAATaGGTCGACCACATAGATTCG +
Preference number: 4 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLTALRK*VDHIDS
Trigger: CGAATCTATGTGGTCGACCCATTTTCTGAGTGCTGT...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATATCCCTTCCCTTCACTaGGAAAGAAGCATATTCTAC +
Preference number: 4 (lower is better)
Translates to: ELTENYFDYTQSSFLREDIPSLH*ERSIFY
Trigger: GTAGAATATGCTTCTTTCCCAGTGAAGGGAAGGGAT...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGAAACACACCCAACTGTaGTATGATGAGGTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLKHTQL*YDEVCQ
Trigger: TTGGCAAACCTCATCATATCACAGTTGGGTGTGTTT...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATCACTCAAAAGAAGCATaGTTCCTTCATGGTGATAAC +
Preference number: 4 (lower is better)
Translates to: ELTENYFDYTQSSFLREDHSKEA*FLHGDN
Trigger: GTTATCACCATGAAGGAATCATGCTTCTTTTGAGTG...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGTGGAGTGCTGGACTTaGAATCAGATGTATGAGTTA +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRVECWT*NQMYEL
Trigger: TAACTCATACATCTGATTTCAAGTCCAGCACTCCAC...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTATCCAAAAACAGCTCATaGATGTTTTGGGCAACCACA +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVSKNSS*MFWATT
Trigger: TGTGGTTGCCCAAAACATGCATGAGCTGTTTTTGGA...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGATTTATTAGTATCAGGTaGTTTTGGAGGACTCGGAGC +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRFISIR*FWRTRS
Trigger: GCTCCGAGTCCTCCAAAAGCACCTGATACTAATAAA...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAAAACTTGAAATAATCTaGCCTTTAGTCCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKKLEII*PLVLPL
Trigger: TAAAGGCAGGACTAAAGGGCAGATTATTTCAAGTTT...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGACGTCTATTGCTACACTaGTTATTCTTCCACCTGTCT +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRRLLLH*LFFHLS
Trigger: AGACAGGTGGAAGAATAAGCAGTGTAGCAATAGACG...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGACATCATACTTTTCTGTaGCCTGTGATTGTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRHHTFL*PVIVEE
Trigger: CTCCTCTACAATCACAGGGCACAGAAAAGTATGATG...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAATACATAGAAGAAGGTaGTGGACCAGAGAAGGGATA +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRIHRRR*WTREGI
Trigger: TATCCCTTCTCTGGTCCAGCACCTTCTTCTATGTAT...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTATTGAGTAGAGGGAGCTaGTGTATTGCTCTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVLSRGS*CIALSF
Trigger: AAAAGAGAGAGCAATACACCAGCTCCCTCTACTCAA...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp AATAATATTCATATCCATTCTCAAGTTGTCACCACACCCTCTTTTAGAAGGGTGTGCTGGATTTGGAAATaGCACTCCAAACTCAACATT +
Preference number: 4 (lower is better)
Translates to: NNIHIHSQVVTTPSFRRVCWIWK*HSKLNI
Trigger: AATGTTGAGTTTGGAGTGCCATTTCCAAATCCAGCA...CACCCTTCTAAAAGAGGGTGTGGTGACAACTTGAGAATGGATATGAATATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGACTGATTATCACGTCTaGCAAAATCCATTCTCACGT +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLTDYHV*QNPFSR
Trigger: ACGTGAGAATGGATTTTGCCAGACGTGATAATCAGT...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAATAATCACTCTCTTTTaGGAGAGTCGAACTGATTAT +
Preference number: 4 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGIITLF*ESRTDY
Trigger: ATAATCAGTTCGACTCTCCCAAAAGAGAGTGATTAT...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372129.4
CDS-3UTR CCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAATGGTACATCTTATATTaGCTCAATATCCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKWYILY*LNIQKE
Trigger: TTCCTTCTGGATATTGAGCCAATATAAGATGTACCA...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAGATGTAATTAGCTGGTaGAACTGTAAAGTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKDVISW*NCKVSV
Trigger: AACTGAAACTTTACAGTTCCACCAGCTAATTACATC...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAAATTACCGACCTCTTTTaGGAGAGTCGAACTGATTAT +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKITDLF*ESRTDY
Trigger: ATAATCAGTTCGACTCTCCCAAAAGAGGTCGGTAAT...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGATCCGTCAATGGTAGCTaGGAAATTTCTGCTATATGG +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRSVNGS*EISAIW
Trigger: CCATATAGCAGAAATTTCCCAGCTACCATTGACGGA...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp AATAATATTCATATCCATTCTCAAGTTGTCACCACACCCTCTTTTAGAAGGGTGAAATTACCCAGGTCCTaGAAGATAGTCCACAGTTAT +
Preference number: 4 (lower is better)
Translates to: NNIHIHSQVVTTPSFRRVKLPRS*KIVHSY
Trigger: ATAACTGTGGACTATCTTCCAGGACCTGGGTAATTT...CACCCTTCTAAAAGAGGGTGTGGTGACAACTTGAGAATGGATATGAATATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCATTTTCCAAAATAAGGTaGAAATGTGAGACCTGTAGC +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAFSKIR*KCETCS
Trigger: GCTACAGGTCTCACATTTCCACCTTATTTTGGAAAA...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGGCTGGTGTCATTGCTaGGTTGAAAATTACTTCAAT +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRGWCHC*VENYFN
Trigger: ATTGAAGTAATTTTCAACTCAGCAATGACACCAGCC...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTATTTTTCTTAGCAGCATaGACTGATAGCTGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVFFLAA*TDSWKV
Trigger: TACCTTCCAGCTATCAGTTCATGCTGCTAAGAAAAA...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR TCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGAAATCAGCAATCCAATaGTTGTGGCAAAAACTCAGT +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLKSAIQ*LWQKLS
Trigger: ACTGAGTTTTTGCCACAATCATTGGATTGCTGATTT...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAAAACCTATGCAACTCCTaGACTAACAGAGAACTATTT +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKNLCNS*TNRELF
Trigger: AAATAGTTCTCTGTTAGTTCAGGAGTTGCATAGGTT...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTAGGAGACATCATCCTCTaGAATCATCTCTTGAAAATG +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVGDIIL*NHLLKM
Trigger: CATTTTCAAGAGATGATTGCAGAGGATGATGTCTCC...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGCATCTTTCACTTCTTTaGCTTCTTTGCATTCTTTCG +
Preference number: 4 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLHLSLL*LLCILS
Trigger: CGAAAGAATGCAAAGAAGCCAAAGAAGTGAAAGATG...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAATTTTGAGGAGCCATTaGCATATAATCACTGGAGCT +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRILRSH*HIITGA
Trigger: AGCTCCAGTGATTATATGCCAATGGCTCCTCAAAAT...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTATGCTGGATTTGGAAATaGCACTCCAAACTCAACATT +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVCWIWK*HSKLNI
Trigger: AATGTTGAGTTTGGAGTGCCATTTCCAAATCCAGCA...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CCA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCACTAAGGTTATACTTCTaGGTGTTTCTTTCTAATCGA +
Preference number: 4 (lower is better)
Translates to: TFSKVQVPKILIQFTSEALRLYF*VFLSNR
Trigger: TCGATTAGAAAGAAACACCCAGAAGTATAACCTTAG...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTAAAGGCAATCTGCAACTaGAAAGCATTTCCTCAATCA +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVKAICN*KAFPQS
Trigger: TGATTGAGGAAATGCTTTCCAGTTGCAGATTGCCTT...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTACCAGTCTTGAGTATCTaGATACAAACTCTATGGAGA +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVPVLSI*IQTLWR
Trigger: TCTCCATAGAGTTTGTATCCAGATACTCAAGACTGG...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR TCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTACTGCTCAGAGAAAGGTaGACCTATAACAATATATTG +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVLLRER*TYNNIL
Trigger: CAATATATTGTTATAGGTTCACCTTTCTCTGAGCAG...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGGCATTTGCTGTTGCTTaGTTTGAGTTAATTTGCCAA +
Preference number: 4 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLAFAVA*FELICQ
Trigger: TTGGCAAATTAACTCAAAGCAAGCAACAGCAAATGC...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR GCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGATTTCAGCAAATTATGTaGAGGAATCACCCTCAAGAT +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRFQQIM*RNHPQD
Trigger: ATCTTGAGGGTGATTCCTGCACATAATTTGCTGAAA...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp AATAATATTCATATCCATTCTCAAGTTGTCACCACACCCTCTTTTAGAAGGGTGTGGAAATTTACTGAATaGACCCTCAATTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: NNIHIHSQVVTTPSFRRVWKFTE*TLNSLS
Trigger: AGAAAGTGAATTGAGGGTGCATTCAGTAAATTTCCA...CACCCTTCTAAAAGAGGGTGTGGTGACAACTTGAGAATGGATATGAATATTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR GCA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTAATAGCACATTGCATGTaGTTTAAAAGGGACTTCTTG +
Preference number: 4 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVIAHCM*FKRDFL
Trigger: CAAGAAGTCCCTTTTAAAGCACATGCAATGTGCTAT...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAATATAGAAAACCTCAGTaGACTCTGATGAGTCAAAAT +
Preference number: 4 (lower is better)
Translates to: FTKEDKAKATQSISVKQKYRKPQ*TLMSQN
Trigger: ATTTTGACTCATCAGAGTCCACTGAGGTTTTCTATA...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CCA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTAATTAGCTGGTaGAACTGTAAAGTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRDVISW*NCKVSV
Trigger: AACTGAAACTTTACAGTTCCACCAGCTAATTACATC...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 90 bp CCGATGCCCGGGGCTGCGGCGAGCGCGGAGGCCGCAGCTACAACTTaGCTGAGGGCTAAAGTCGGCTCTGCAGCCGAAGCGACAGCCGGG +
Preference number: 5 (lower is better)
Translates to: PMPGAAASAEAAATT*LRAKVGSAAEATAG
Trigger: CCCGGCTGTCGCTTCGGCTGCAGAGCCGACTTTAGCCCTCAGCCAAGTTGTAGCTGCGGCCTCCGCGCTCGCCGCAGCCCCGGGCATCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 90 bp AACAGGTTGAAACCAGCGGGCAGAGGCGGAGTCAAATCCAGCAGCTaGGGCTGCTGCGCCGATGCCCGGGGCTGCGGCGAGCGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: NRLKPAGRGGVKSSS*GCCADARGCGERGG
Trigger: GCCTCCGCGCTCGCCGCAGCCCCGGGCATCGGCGCAGCAGCCGCAGCTGCTGGATTTGACTCCGCCTCTGCCCGCTGGTTTCAACCTGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 90 bp CGGGCAGGTCCTCCTCTTCGGACTCGGAGTCTGACCGGGAGCCAGTaGCCGTGGAGAGCCACATGGCTCCCGGACAAGACGACCCGGTCC +
Preference number: 5 (lower is better)
Translates to: RAGPPLRTRSLTGSQ*PWRATWLPDKTTRS
Trigger: GGACCGGGTCGTCTTGTCCGGGAGCCATGTGGCTCTCCACGGCCACTGGCTCCCGGTCAGACTCCGAGTCCGAAGAGGAGGACCTGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS TCA 90 bp GACTTCCTCCCCGACGGGCAGGTCCTCCTCTTCGGACTCGGAGTCTaGCCGGGAGCCAGTGGCCGTGGAGAGCCACATGGCTCCCGGACA +
Preference number: 5 (lower is better)
Translates to: DFLPDGQVLLFGLGV*PGASGRGEPHGSRT
Trigger: TGTCCGGGAGCCATGTGGCTCTCCACGGCCACTGGCTCCCGGTCAGACTCCGAGTCCGAAGAGGAGGACCTGCCCGTCGGGGAGGAAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS TCA 90 bp CCGTGGAGAGCCACATGGCTCCCGGACAAGACGACCCGGTCCCAATaGGTGCGGTCGGGGTTCCCGAGGAAAGAAGCGGGGTGGTCACCA +
Preference number: 5 (lower is better)
Translates to: PWRATWLPDKTTRSQ*VRSGFPRKEAGWSP
Trigger: TGGTGACCACCCCGCTTCTTTCCTCGGGAACCCCGACCGCACTCATTGGGACCGGGTCGTCTTGTCCGGGAGCCATGTGGCTCTCCACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 90 bp GGAGAGCCACATGGCTCCCGGACAAGACGACCCGGTCCCAATGAGTaGGGTCGGGGTTCCCGAGGAAAGAAGCGGGGTGGTCACCACTGC +
Preference number: 5 (lower is better)
Translates to: GEPHGSRTRRPGPNE*GRGSRGKKRGGHHC
Trigger: GCAGTGGTGACCACCCCGCTTCTTTCCTCGGGAACCCCGACCGCACTCATTGGGACCGGGTCGTCTTGTCCGGGAGCCATGTGGCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 90 bp AGCATCTCGTCTTCCCCGTCGCCGATGGCCCTGAGGTGGCAAAACTaGTCAAAGCGGGACCTTCTGAGCCAGCCTCCCGGCTCGAGCGGC +
Preference number: 5 (lower is better)
Translates to: SISSSPSPMALRWQN*SKRDLLSQPPGSSG
Trigger: GCCGCTCGAGCCGGGAGGCTGGCTCAGAAGGTCCCGCTTTGAGCAGTTTTGCCACCTCAGGGCCATCGGCGACGGGGAAGACGAGATGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 90 bp CCGCTGCTGCAGCCGCCGCGGCGCGGACACTGTGCCGGAACTTCCTaGCATTTTCGTAGTATTCCAGCCGAGCTGGGGCGTCAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: PLLQPPRRGHCAGTS*HFRSIPAELGRQQS
Trigger: AGACTGCTGACGCCCCAGCTCGGCTGGAATACTACGAAAATGCCAGGAAGTTCCGGCACAGTGTCCGCGCCGCGGCGGCTGCAGCAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 90 bp AAAAGCTGGCCGGCACTGAAACCGCTCTCCTTGACCTGCGCCCTCTaGGCAGGTGCAGTCTTCCTCGCCTGGAGTGGGCCACAGGCTCGC +
Preference number: 5 (lower is better)
Translates to: KSWPALKPLSLTCAL*AGAVFLAWSGPQAR
Trigger: GCGAGCCTGTGGCCCACTCCAGGCGAGGAAGACTGCACCTGCCCAGAGGGCGCAGGTCAAGGAGAGCGGTTTCAGTGCCGGCCAGCTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 90 bp CCAGAGTTCTTGCCACCACCTGAGCCATGGCCATCTCCAGGTCCCTaGCCACCACCTGAGCCATGCCCACCTCCAGGTCTCTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: PEFLPPPEPWPSPGP*PPPEPCPPPGLWPP
Trigger: TGGTGGCCAGAGACCTGGAGGTGGGCATGGCTCAGGTGGTGGCCAGGGACCTGGAGATGGCCATGGCTCAGGTGGTGGCAAGAACTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 90 bp GGCAGCCCCGCCAGCCTGGTTATCACCTCTGGCAAGGTTTGCAGATaGGTTGTGGGCTCCAGGGTTCGAGCCACCGGCAACGTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: GSPASLVITSGKVCR*VVGSRVRATGNVLG
Trigger: GCCCAAGACGTTGCCGGTGGCTCGAACCCTGGAGCCCACAACCCATCTGCAAACCTTGCCAGAGGTGATAACCAGGCTGGCGGGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 90 bp GTGAGTGTCGTCGTCGTTGTCAGAATCTTCTCTCTCCGGGGGTCTTaGCACCCGGCGACTGCGAGGTGGTGGTTCCGGAGCGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VSVVVVVRIFSLRGS*HPATARWWFRSGSC
Trigger: GCAGCTGCCGCTCCGGAACCACCACCTCGCAGTCGCCGGGTGCCAAGACCCCCGGAGAGAGAAGATTCTGACAACGACGACGACACTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 90 bp CCGAGTGTCCACAGCGACGGATGCTCAGGAGCTGGACGACCACGCTaGCCACTTCGGTGTTCAGCCTCACAAACACGACCTCCTCGTCGG +
Preference number: 5 (lower is better)
Translates to: PSVHSDGCSGAGRPR*PLRCSASQTRPPRR
Trigger: CCGACGAGGAGGTCGTGTTTGTGAGGCTGAACACCGAAGTGGCCAGCGTGGTCGTCCAGCTCCTGAGCATCCGTCGCTGTGGACACTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 90 bp CCGCCAGCCTGGTTATCACCTCTGGCAAGGTTTGCAGATGGGTTGTaGGCTCCAGGGTTCGAGCCACCGGCAACGTCTTGGGCTCCCCTT +
Preference number: 5 (lower is better)
Translates to: PPAWLSPLARFADGL*APGFEPPATSWAPL
Trigger: AAGGGGAGCCCAAGACGTTGCCGGTGGCTCGAACCCTGGAGCCCACAACCCATCTGCAAACCTTGCCAGAGGTGATAACCAGGCTGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 90 bp GGCTCCAGGGTTCGAGCCACCGGCAACGTCTTGGGCTCCCCTTACTaGTTCGGCATCAGCAGCATTAGCAACAGGTTGAAACCAGCGGGC +
Preference number: 5 (lower is better)
Translates to: GSRVRATGNVLGSPY*FGISSISNRLKPAG
Trigger: GCCCGCTGGTTTCAACCTGTTGCTAATGCTGCTGATGCCGAAGCAGTAAGGGGAGCCCAAGACGTTGCCGGTGGCTCGAACCCTGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 90 bp GCTGCCGCTGCCGCCGCTGCTGCACCTCTTAGTCTTCTTGTCGCTTaGTCGCGAGTGAAGGAGCAACTCGCCATGGTGATGCACGATGGT +
Preference number: 5 (lower is better)
Translates to: AAAAAAAAPLSLLVA*SRVKEQLAMVMHDG
Trigger: ACCATCGTGCATCACCATGGCGAGTTGCTCCTTCACTCGCGACCAAGCGACAAGAAGACTAAGAGGTGCAGCAGCGGCGGCAGCGGCAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 90 bp CCCGGACCGATGACAGTGGACCTGCCTACTTCCAAGAAGAAATACTaGTCCGAGTGTCCACAGCGACGGATGCTCAGGAGCTGGACGACC +
Preference number: 5 (lower is better)
Translates to: PGPMTVDLPTSKKKY*SECPQRRMLRSWTT
Trigger: GGTCGTCCAGCTCCTGAGCATCCGTCGCTGTGGACACTCGGAGCAGTATTTCTTCTTGGAAGTAGGCAGGTCCACTGTCATCGGTCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 90 bp CTACTTCCAAGAAGAAATACTGCTCCGAGTGTCCACAGCGACGGATaGTCAGGAGCTGGACGACCACGCTGGCCACTTCGGTGTTCAGCC +
Preference number: 5 (lower is better)
Translates to: LLPRRNTAPSVHSDG*SGAGRPRWPLRCSA
Trigger: GGCTGAACACCGAAGTGGCCAGCGTGGTCGTCCAGCTCCTGAGCATCCGTCGCTGTGGACACTCGGAGCAGTATTTCTTCTTGGAAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 90 bp AAGAAATACTGCTCCGAGTGTCCACAGCGACGGATGCTCAGGAGCTaGACGACCACGCTGGCCACTTCGGTGTTCAGCCTCACAAACACG +
Preference number: 5 (lower is better)
Translates to: KKYCSECPQRRMLRS*TTTLATSVFSLTNT
Trigger: CGTGTTTGTGAGGCTGAACACCGAAGTGGCCAGCGTGGTCGTCCAGCTCCTGAGCATCCGTCGCTGTGGACACTCGGAGCAGTATTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCCGCAGCGGCGGCGCTaGCTCTCGAGGATGAGGCGG +
Preference number: 5 (lower is better)
Translates to: DLCATTEQSSKQASRPLYPQRRR*LSRMRR
Trigger: CCGCCTCATCCTCGAGAGCAAGCGCCGCCGCTGCGG...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 90 bp ACTGTGCCGGAACTTCCTGGCATTTTCGTAGTATTCCAGCCGAGCTaGGGCGTCAGCAGTCTCGAGTTTGAGCACGAAGTAGCGCCTGTG +
Preference number: 5 (lower is better)
Translates to: TVPELPGIFVVFQPS*GVSSLEFEHEVAPV
Trigger: CACAGGCGCTACTTCGTGCTCAAACTCGAGACTGCTGACGCCCCAGCTCGGCTGGAATACTACGAAAATGCCAGGAAGTTCCGGCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 90 bp TGGGTGAAAAGAGCAATGAGGTGTCGGTACCTTGCATCTGCTCGCTaGCTCACGGAAAAGCACTGGTATAGGGTGATCACGCGCCGCGGT +
Preference number: 5 (lower is better)
Translates to: WVKRAMRCRYLASAR*LTEKHWYRVITRRG
Trigger: ACCGCGGCGCGTGATCACCCTATACCAGTGCTTTTCCGTGAGCCAGCGAGCAGATGCAAGGTACCGACACCTCATTGCTCTTTTCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTAGGTTTGCAGATGGGTaGTGGGCTCCAGGGTTCGAG +
Preference number: 5 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPRFADG*WAPGFE
Trigger: CTCGAACCCTGGAGCCCACAACCCATCTGCAAACCT...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCCTCTCTCCGGGGGTCTaGGCACCCGGCGACTGCGAG +
Preference number: 5 (lower is better)
Translates to: CATTEQSSKQASRPLYLFLSPGV*APGDCE
Trigger: CTCGCAGTCGCCGGGTGCCAAGACCCCCGGAGAGAG...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTCCCATACTCAACCAGTaGGAAGAGTCGGAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: QGKLPLESGLPPALSCFPPILNQ*EESEAG
Trigger: CCCTGCCTCCGACTCTTCCAACTGGTTGAGTATGGG...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACCTGAAACCGCTCTCCTaGACCTGCGCCCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYLKPLS*TCALWA
Trigger: TGCCCAGAGGGCGCAGGTCAAGGAGAGCGGTTTCAG...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTTCTCGAGGCTGTCTGTaGGAAAAGCAGAGACAGCGG +
Preference number: 5 (lower is better)
Translates to: QGKLPLESGLPPALSCFPSRGCL*EKQRQR
Trigger: CCGCTGTCTCTGCTTTTCCAACAGACAGCCTCGAGA...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS CCA 90 bp GCCTCATTGGCACGTATGGGTCATCCTCATCTTCATCAAAAGCTCTaGCTCTGTGGGGACCTCGAGCTGCACCTTCTGGGATCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: ASLARMGHPHLHQKL*LCGDLELHLLGSLH
Trigger: ATGCAGAGATCCCAGAAGGTGCAGCTCGAGGTCCCCACAGAGCCAGAGCTTTTGATGAAGATGAGGATGACCCATACGTGCCAATGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 90 bp GGTCTCTCTCGAGGCTGTCTGTTGGAAAAGCAGAGACAGCGGCTCTaGCTGCTGCAAAGAAACTTTGAGAACGGCTTTGTGGGCGTCTTC +
Preference number: 5 (lower is better)
Translates to: GLSRGCLLEKQRQRL*LLQRNFENGFVGVF
Trigger: GAAGACGCCCACAAAGCCGTTCTCAAAGTTTCTTTGCAGCAGCCAGAGCCGCTGTCTCTGCTTTTCCAACAGACAGCCTCGAGAGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAATGGAGCCTTGGCCATTaGAGCCCTGGCCACCTCCTG +
Preference number: 5 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKWSLGH*SPGHLL
Trigger: CAGGAGGTGGCCAGGGCTCAAATGGCCAAGGCTCCA...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTGCAGGCAGCACAGCCTaGGATCTGTACAACAAGGAT +
Preference number: 5 (lower is better)
Translates to: QGKLPLESGLPPALSCFPAGSTA*DLYNKD
Trigger: ATCCTTGTTGTACAGATCCAAGGCTGTGCTGCCTGC...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS GCA 90 bp AAAAACAGCTCATGCATGTTTTGGGCAACCACACAGTCATCGACCTaGATCCAGAGCTCTCCCGGACCGATGACAGTGGACCTGCCTACT +
Preference number: 5 (lower is better)
Translates to: KNSSCMFWATTQSST*IQSSPGPMTVDLPT
Trigger: AGTAGGCAGGTCCACTGTCATCGGTCCGGGAGAGCTCTGGATGCAGGTCGATGACTGTGTGGTTGCCCAAAACATGCATGAGCTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 90 bp GCCGATGCTGATGCTGTAGCTGCGGCAGCGGGCTCTGTATTCGTCTaGACACAAGGCTCTCATCTTCTCCAAAAACAGCTCATGCATGTT +
Preference number: 5 (lower is better)
Translates to: ADADAVAAAAGSVFV*TQGSHLLQKQLMHV
Trigger: AACATGCATGAGCTGTTTTTGGAGAAGATGAGAGCCTTGTGTGCAGACGAATACAGAGCCCGCTGCCGCAGCTACAGCATCAGCATCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 90 bp TCTCTCGAGGCTGTCTGTTGGAAAAGCAGAGACAGCGGCTCTGGCTaGTGCAAAGAAACTTTGAGAACGGCTTTGTGGGCGTCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: SLEAVCWKSRDSGSG*CKETLRTALWASSL
Trigger: GAGAGAAGACGCCCACAAAGCCGTTCTCAAAGTTTCTTTGCAGCAGCCAGAGCCGCTGTCTCTGCTTTTCCAACAGACAGCCTCGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 90 bp GGCACGTATGGGTCATCCTCATCTTCATCAAAAGCTCTGGCTCTGTaGGGACCTCGAGCTGCACCTTCTGGGATCTCTGCATCTTTCACT +
Preference number: 5 (lower is better)
Translates to: GTYGSSSSSSKALAL*GPRAAPSGISASFT
Trigger: AGTGAAAGATGCAGAGATCCCAGAAGGTGCAGCTCGAGGTCCCCACAGAGCCAGAGCTTTTGATGAAGATGAGGATGACCCATACGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCACCGCAGCGGCGGCGCTaGCTCTCGAGGATGAGGCGG +
Preference number: 5 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAPQRRR*LSRMRR
Trigger: CCGCCTCATCCTCGAGAGCAAGCGCCGCCGCTGCGG...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTTGGAGGTGGTGGCATTaGCTGTTGCTTGCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: QGKLPLESGLPPALSCFPWRWWH*LLLALS
Trigger: ACTCAAAGCAAGCAACAGCAAATGCCACCACCTCCA...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAACCACCCCTGGCCTCATaGGCACGTATGGGTCATCCT +
Preference number: 5 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKPPLAS*ARMGHP
Trigger: AGGATGACCCATACGTGCCAATGAGGCCAGGGGTGG...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACTCTCTCCGGGGGTCTaGGCACCCGGCGACTGCGAG +
Preference number: 5 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGLSPGV*APGDCE
Trigger: CTCGCAGTCGCCGGGTGCCAAGACCCCCGGAGAGAG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 90 bp TTTGAGGAGCCATTGGCATATAATCACTGGAGCTTACAAGAGGGGTaGCCACCCCTGGCCTCATTGGCACGTATGGGTCATCCTCATCTT +
Preference number: 5 (lower is better)
Translates to: FEEPLAYNHWSLQEG*PPLASLARMGHPHL
Trigger: AAGATGAGGATGACCCATACGTGCCAATGAGGCCAGGGGTGGCCACCCCTCTTGTAAGCTCCAGTGATTATATGCCAATGGCTCCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCCACCCCTGGCCTCATaGGCACGTATGGGTCATCCT +
Preference number: 5 (lower is better)
Translates to: DLCATTEQSSKQASRPLYPPLAS*ARMGHP
Trigger: AGGATGACCCATACGTGCCAATGAGGCCAGGGGTGG...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 90 bp GCTTTGAGAATGATCCCTCACCTGAAGGCTTTGAAGCTGCATCTTTaGGGTCCCAGTTATAGGAGACTTCTTTGTCTAGGCCCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: ALRMIPHLKALKLHL*GPSYRRLLCLGPSP
Trigger: TGGGGAGGGGCCTAGACAAAGAAGTCTCCTATAACTGGGACCCCAAAGATGCAGCTTCAAAGCCTTCAGGTGAGGGATCATTCTCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACAGGTTTGCAGATGGGTaGTGGGCTCCAGGGTTCGAG +
Preference number: 5 (lower is better)
Translates to: DLCATTEQSSKQASRPLYRFADG*WAPGFE
Trigger: CTCGAACCCTGGAGCCCACAACCCATCTGCAAACCT...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTTCCTCCAGCCTTATCTaGCTTTCCTTGATTTCCCAT +
Preference number: 5 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPSSSLI*LSLISH
Trigger: ATGGGAAATCAAGGAAAGCAAGATAAGGCTGGAGGA...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTTCTTCTTCTACATGTTaGACTCTGCCTTCACCAGGT +
Preference number: 5 (lower is better)
Translates to: QGKLPLESGLPPALSCFPSSSTC*TLPSPG
Trigger: ACCTGGTGAAGGCAGAGTCAAACATGTAGAAGAAGA...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAACTGAAACCGCTCTCCTaGACCTGCGCCCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKLKPLS*TCALWA
Trigger: TGCCCAGAGGGCGCAGGTCAAGGAGAGCGGTTTCAG...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGATGGAGCCTTGGCCATTaGAGCCCTGGCCACCTCCTG +
Preference number: 5 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGWSLGH*SPGHLL
Trigger: CAGGAGGTGGCCAGGGCTCAAATGGCCAAGGCTCCA...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTACTTTCCAGGTAACATaGGCACATACTCACTGTTGT +
Preference number: 5 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPTFQVT*AHTHCC
Trigger: ACAACAGTGAGTATGTGCCAATGTTACCTGGAAAGT...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGCACCTCTGGCAAGGTTaGCAGATGGGTTGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWHLWQG*QMGCGL
Trigger: GAGCCCACAACCCATCTGCAAACCTTGCCAGAGGTG...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTATGCATTATGGGAACTaGAGCCACAGATTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: QGKLPLESGLPPALSCFPMHYGN*SHRFAF
Trigger: AAAGGCAAATCTGTGGCTCAAGTTCCCATAATGCAT...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS TCA 90 bp GACTGTCTGGGTTCAGCAATTATGCCCCACGAATCTGGTAGTCCTTaGGTAGAGGGAGCTGGTGTATTGCTCTCTCTTTTAGTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: DCLGSAIMPHESGSP*VEGAGVLLSLLVKS
Trigger: GGACTTCACTAAAAGAGAGAGCAATACACCAGCTCCCTCTACTCAAGGACTACCAGATTCGTGGGGCATAATTGCTGAACCCAGACAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 90 bp ATCCTCATCTTCATCAAAAGCTCTGGCTCTGTGGGGACCTCGAGCTaGACCTTCTGGGATCTCTGCATCTTTCACTTCTTTGGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: ILIFIKSSGSVGTSS*TFWDLCIFHFFGFF
Trigger: AAAGAAGCCAAAGAAGTGAAAGATGCAGAGATCCCAGAAGGTGCAGCTCGAGGTCCCCACAGAGCCAGAGCTTTTGATGAAGATGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAATGCTGCAAAGAAACTTaGAGAACGGCTTTGTGGGCG +
Preference number: 5 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKCCKET*RTALWA
Trigger: CGCCCACAAAGCCGTTCTCAAAGTTTCTTTGCAGCA...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAACAGCAAGCCAAGATTaGTGTGCCACCACGGAACAA +
Preference number: 5 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKTASQD*CATTEQ
Trigger: TTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGT...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp CAGGGTAAGCTGCCCCTGGAGTCAGGTCTTCCTCCAGCCTTATCTTGCTTTCCTGTGTCTAGGTATTCCTaGGGAAGTCAGAATTTATTC +
Preference number: 5 (lower is better)
Translates to: QGKLPLESGLPPALSCFPVSRYS*GSQNLF
Trigger: GAATAAATTCTGACTTCCCAAGGAATACCTAGACAC...AGGAAAGCAAGATAAGGCTGGAGGAAGACCTGACTCCAGGGGCAGCTTACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTCTGCCACTTACCTTTTaGATCTTGGGAAAATTCTCA +
Preference number: 5 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPLPLTF*ILGKFS
Trigger: TGAGAATTTTCCCAAGATCAAAAAGGTAAGTGGCAG...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACCCAGCCCCCTGGGTTaGACTATTACCTGCCACACA +
Preference number: 5 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGPSPLG*TITCHT
Trigger: TGTGTGGCAGGTAATAGTCAAACCCAGGGGGCTGGG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCCAGCTCATGCATGTTTaGGGCAACCACACAGTCATC +
Preference number: 5 (lower is better)
Translates to: CATTEQSSKQASRPLYLFQLMHV*GNHTVI
Trigger: GATGACTGTGTGGTTGCCCAAAACATGCATGAGCTG...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCTGGAGGTGGTGGCATTaGCTGTTGCTTGCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: CATTEQSSKQASRPLYLFWRWWH*LLLALS
Trigger: ACTCAAAGCAAGCAACAGCAAATGCCACCACCTCCA...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCCATGATCTGAAGGCTTaGAAGGTGATCCCCCATCTC +
Preference number: 5 (lower is better)
Translates to: CATTEQSSKQASRPLYLFHDLKA*KVIPHL
Trigger: GAGATGGGGGATCACCTTCAAAGCCTTCAGATCATG...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAATCTTCCTCAATAGCATaGCTACCTGTAGCACTGAGG +
Preference number: 5 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKSSSIA*LPVALR
Trigger: CCTCAGTGCTACAGGTAGCAATGCTATTGAGGAAGA...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACTGCTGCAAAGAAACTTaGAGAACGGCTTTGTGGGCG +
Preference number: 5 (lower is better)
Translates to: DLCATTEQSSKQASRPLYCCKET*RTALWA
Trigger: CGCCCACAAAGCCGTTCTCAAAGTTTCTTTGCAGCA...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp AATAATATTCATATCCATTCTCAAGTTGTCACCACACCCTCTTTTAGAAGGGTGGCCACCGGCAACGTCTaGGGCTCCCCTTACTGCTTC +
Preference number: 5 (lower is better)
Translates to: NNIHIHSQVVTTPSFRRVATGNV*GSPYCF
Trigger: GAAGCAGTAAGGGGAGCCCAAGACGTTGCCGGTGGC...CACCCTTCTAAAAGAGGGTGTGGTGACAACTTGAGAATGGATATGAATATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp AGAAGGCTGTGTACTGGGAGTGATCAACATCTGGCGAAGCCCTCTATGGGCCCTTCAGAATCATTCAGCTaGTTCTTAACACTTCACAGA +
Preference number: 5 (lower is better)
Translates to: RRLCTGSDQHLAKPSMGPSESFS*FLTLHR
Trigger: TCTGTGAAGTGTTAAGAACAAGCTGAATGATTCTGA...AGGGCCCATAGAGGGCTTCGCCAGATGTTGATCACTCCCAGTACACAGCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS TCA 90 bp AAAGAAAGTCGGTTAGGTCTCTTAGCTTTATTCTTTGGGGGCTCATaGTCTGAAGGCTTTGAAGGTGATCCCCCATCTCCAGGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: KESRLGLLALFFGGS*SEGFEGDPPSPGFE
Trigger: CTCAAAGCCTGGAGATGGGGGATCACCTTCAAAGCCTTCAGATCATGAGCCCCCAAAGAATAAAGCTAAGAGACCTAACCGACTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGGATTTCTGGGGTTTTTaGGAATTGCACCGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWDFWGF*ELHRLQ
Trigger: CTGGAGCCGGTGCAATTCCAAAAAACCCCAGAAATC...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGCATGATCTGAAGGCTTaGAAGGTGATCCCCCATCTC +
Preference number: 5 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWHDLKA*KVIPHL
Trigger: GAGATGGGGGATCACCTTCAAAGCCTTCAGATCATG...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCGAGGGAGCTGGTGTATaGCTCTCTCTTTTAGTGAAG +
Preference number: 5 (lower is better)
Translates to: CATTEQSSKQASRPLYLFEGAGV*LSLLVK
Trigger: CTTCACTAAAAGAGAGAGCAATACACCAGCTCCCTC...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGCCACCGGCAACGTCTaGGGCTCCCCTTACTGCTTC +
Preference number: 5 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRATGNV*GSPYCF
Trigger: GAAGCAGTAAGGGGAGCCCAAGACGTTGCCGGTGGC...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCACACCTCTGGCAAGGTTaGCAGATGGGTTGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAHLWQG*QMGCGL
Trigger: GAGCCCACAACCCATCTGCAAACCTTGCCAGAGGTG...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAATGGTGGACAGCATCTTaGCACGTGCGTGCACTGTTC +
Preference number: 5 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKWWTAS*HVRALF
Trigger: GAACAGTGCACGCACGTGCAAAGATGCTGTCCACCA...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS TCA 90 bp ATAGCGAATGGCACTGTCAGCAAGAGCCATGGCTGGTGTCATTGCTaGGTTGAAAATTACTTCAATGTAGTCACCCTCTTCCTCAATAGC +
Preference number: 5 (lower is better)
Translates to: IANGTVSKSHGWCHC*VENYFNVVTLFLNS
Trigger: GCTATTGAGGAAGAGGGTGACTACATTGAAGTAATTTTCAACTCAGCAATGACACCAGCCATGGCTCTTGCTGACAGTGCCATTCGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCCATTTTGAGGAGCCATaGGCATATAATCACTGGAGC +
Preference number: 5 (lower is better)
Translates to: CATTEQSSKQASRPLYLFHFEEP*AYNHWS
Trigger: GCTCCAGTGATTATATGCCAATGGCTCCTCAAAATG...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACCTCACCTGAAGGCTTaGAAGCTGCATCTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGPHLKA*KLHLWG
Trigger: ACCCCAAAGATGCAGCTTCAAAGCCTTCAGGTGAGG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCATCTCGAGGCTGTCTGTaGGAAAAGCAGAGACAGCGG +
Preference number: 5 (lower is better)
Translates to: TFSKVQVPKILIQFTSEASRGCL*EKQRQR
Trigger: CCGCTGTCTCTGCTTTTCCAACAGACAGCCTCGAGA...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCCAAGCTTCAAGACCTTaGTACCTATTCTCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: CATTEQSSKQASRPLYLFQASRP*YLFSVV
Trigger: GACCACAGAGAATAGGTACAAAGGTCTTGAAGCTTG...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACAAACACTATACAGAGTaGCAAAGTCGTCTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYKHYTE*QSRLPK
Trigger: TTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTT...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGCCTCACTCTGTTCATTaGACAACATGCTATCCCTGC +
Preference number: 5 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWPHSVH*TTCYPC
Trigger: GCAGGGATAGCATGTTGTCAAATGAACAGAGTGAGG...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS TCA 90 bp TCCAGGAGCCATAAACATGTAGTCACTCTCACTGTCATTGTCCTTTaGGTCATCCTCTTTATTAGTATCAGGTGCTTTTGGAGGACTCGG +
Preference number: 5 (lower is better)
Translates to: SRSHKHVVTLTVIVL*VILFISIRCFWRTR
Trigger: CCGAGTCCTCCAAAAGCACCTGATACTAATAAAGAGGATGACTCAAAGGACAATGACAGTGAGAGTGACTACATGTTTATGGCTCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTATTCTCATCATGTACCCTCTaGAATCTTCAAAAGGGGATC +
Preference number: 5 (lower is better)
Translates to: CATTEQSSKQASRPLYLFSSCTL*NLQKGI
Trigger: GATCCCCTTTTGAAGATTCAAGAGGGTACATGATGA...GAATAGGTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAGATTTCTGGGGTTTTTaGGAATTGCACCGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGDFWGF*ELHRLQ
Trigger: CTGGAGCCGGTGCAATTCCAAAAAACCCCAGAAATC...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCACCTCACCTGAAGGCTTaGAAGCTGCATCTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAPHLKA*KLHLWG
Trigger: ACCCCAAAGATGCAGCTTCAAAGCCTTCAGGTGAGG...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGCCCCATCTCCAGGCTTaGAGAATGATCCCTCACCTG +
Preference number: 5 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLPHLQA*RMIPHL
Trigger: CAGGTGAGGGATCATTCTCAAAGCCTGGAGATGGGG...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAACCCCATCTCCAGGCTTaGAGAATGATCCCTCACCTG +
Preference number: 5 (lower is better)
Translates to: FTKEDKAKATQSISVKQKPHLQA*RMIPHL
Trigger: CAGGTGAGGGATCATTCTCAAAGCCTGGAGATGGGG...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGATCCAGAGATAAGGGGTaGGCACGTGGTATAGCTCTT +
Preference number: 5 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGSRDKG*ARGIAL
Trigger: AAGAGCTATACCACGTGCCAACCCCTTATCTCTGGA...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGATCTGTGGTCACCACCTaGCTAGTGTCACGTTCTCAA +
Preference number: 5 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGSVVTT*LVSRSQ
Trigger: TTGAGAACGTGACACTAGCAAGGTGGTGACCACAGA...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGCAAGCTTCAAGACCTTaGTACCTATTCTCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWQASRP*YLFSVV
Trigger: GACCACAGAGAATAGGTACAAAGGTCTTGAAGCTTG...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp CTATTCTCTGTGGTCACCACCTTGCTAGTGTCACGTTCTCAAAGGTCCAGGTACTACACTACTTCAAAGTaGCACATTAAATGCGAAGCA +
Preference number: 5 (lower is better)
Translates to: LFSVVTTLLVSRSQRSRYYTTSK*HIKCEA
Trigger: TGCTTCGCATTTAATGTGCAACTTTGAAGTAGTGTA...GTACCTGGACCTTTGAGAACGTGACACTAGCAAGGTGGTGACCACAGAGAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAATTTTACACCTGCCCTTaGTTAGCAGGCCCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: FTKEDKAKATQSISVKQKFYTCP*LAGPGP
Trigger: TGGCCCAGGGCCTGCTAACAAAGGGCAGGTGTAAAA...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAACTTGGCTTTCTGCTTTaGAGTGGGTGCATAATGGGG +
Preference number: 5 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKLGFLL*SGCIMG
Trigger: CCCCATTATGCACCCACTCAAAAGCAGAAAGCCAAG...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCAAGCTCCGAAAAGGGTTaGGTAGAGAGAAGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: TFSKVQVPKILIQFTSEASSEKG*VERSRS
Trigger: GCTCCTACTTCTCTCTACCAAACCCTTTTCGGAGCT...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCATCTGTGGTCACCACCTaGCTAGTGTCACGTTCTCAA +
Preference number: 5 (lower is better)
Translates to: TFSKVQVPKILIQFTSEASVVTT*LVSRSQ
Trigger: TTGAGAACGTGACACTAGCAAGGTGGTGACCACAGA...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAAATGAAGAACGTCTATaGCTACACTGCTTATTCTTC +
Preference number: 5 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKNEERL*LHCLFF
Trigger: GAAGAATAAGCAGTGTAGCAATAGACGTTCTTCATT...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGTCCCTACAAGGAAGGTaGCCTCTGCAAGCTAAGTGC +
Preference number: 5 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLSLQGR*PLQAKC
Trigger: GCACTTAGCTTGCAGAGGCAACCTTCCTTGTAGGGA...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp GGTTTGCCAATGATGGTACAGCAAGCCAAGATTTGTGTGCCACCACGGAACAAAGTTTTTCAAGGGTTTTaGCAAATTCCTCACTCTGTT +
Preference number: 5 (lower is better)
Translates to: GLPMMVQQAKICVPPRNKVFQGF*QIPHSV
Trigger: AACAGAGTGAGGAATTTGCAAAAACCCTTGAAAAAC...TTTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGTACCATCATTGGCAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS CCA 90 bp AATATAATCACTCTCTTTTGGGAGAGTCGAACTGATTATCACGTCTaGCAAAATCCATTCTCACGTGAGTGTCGTCGTCGTTGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: NIITLFWESRTDYHV*QNPFSRECRRRCQN
Trigger: ATTCTGACAACGACGACGACACTCACGTGAGAATGGATTTTGCCAGACGTGATAATCAGTTCGACTCTCCCAAAAGAGAGTGATTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372129.4
CDS-3UTR CAA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAACATTTTGAGGAGCCATaGGCATATAATCACTGGAGC +
Preference number: 5 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKHFEEP*AYNHWS
Trigger: GCTCCAGTGATTATATGCCAATGGCTCCTCAAAATG...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAGAGAGTGGCGCTTTTTaGAAGCAGAGACATTTTGAG +
Preference number: 5 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGESGAF*KQRHFE
Trigger: CTCAAAATGTCTCTGCTTCAAAAAAGCGCCACTCTC...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCATCTTCCTCAATAGCATaGCTACCTGTAGCACTGAGG +
Preference number: 5 (lower is better)
Translates to: TFSKVQVPKILIQFTSEASSSIA*LPVALR
Trigger: CCTCAGTGCTACAGGTAGCAATGCTATTGAGGAAGA...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGACAGCAAGCCAAGATTaGTGTGCCACCACGGAACAA +
Preference number: 5 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLTASQD*CATTEQ
Trigger: TTGTTCCGTGGTGGCACACAAATCTTGGCTTGCTGT...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGGAGCCCACCATCCCTTaGGTTGGTAGGCAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLEPTIP*VGRQGK
Trigger: TTTTCCTTGCCTACCAACCAAAGGGATGGTGGGCTC...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGAGCCCACCATCCCTTaGGTTGGTAGGCAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: IYINTIQSCKVVSQNCKREPTIP*VGRQGK
Trigger: TTTTCCTTGCCTACCAACCAAAGGGATGGTGGGCTC...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp GATTTGTGTGCCACCACGGAACAAAGCTCTAAGCAAGCTTCAAGACCTTTGTACCTTACCTTTTTGATCTaGGGAAAATTCTCAACATGG +
Preference number: 5 (lower is better)
Translates to: DLCATTEQSSKQASRPLYLTFLI*GKFSTW
Trigger: CCATGTTGAGAATTTTCCCAAGATCAAAAAGGTAAG...GTACAAAGGTCTTGAAGCTTGCTTAGAGCTTTGTTCCGTGGTGGCACACAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAACGCGAAGTATTCGTCTaGGGTGAAAAGAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: FTKEDKAKATQSISVKQKREVFV*GEKSNE
Trigger: CTCATTGCTCTTTTCACCCAAGACGAATACTTCGCG...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGCAGCTCATGCATGTTTaGGGCAACCACACAGTCATC +
Preference number: 5 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLQLMHV*GNHTVI
Trigger: GATGACTGTGTGGTTGCCCAAAACATGCATGAGCTG...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAATCATCATGTACCCTCTaGAATCTTCAAAAGGGGATC +
Preference number: 5 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKSSCTL*NLQKGI
Trigger: GATCCCCTTTTGAAGATTCAAGAGGGTACATGATGA...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAACTCATGTGTGGGCTTTaGTGGTTTTGGCTTGATTTT +
Preference number: 5 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKLMCGL*WFWLDF
Trigger: AAAATCAAGCCAAAACCACAAAAGCCCACACATGAG...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAAGATCTGAGAGGTCGTTaGCTGGATTTGGAAATGGCA +
Preference number: 5 (lower is better)
Translates to: FTKEDKAKATQSISVKQKDLRGR*LDLEMA
Trigger: TGCCATTTCCAAATCCAGCAAACGACCTCTCAGATC...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp AATAATATTCATATCCATTCTCAAGTTGTCACCACACCCTCTTTTAGAAGGGTGGATCTGAGAGGTCGTTaGCTGGATTTGGAAATGGCA +
Preference number: 5 (lower is better)
Translates to: NNIHIHSQVVTTPSFRRVDLRGR*LDLEMA
Trigger: TGCCATTTCCAAATCCAGCAAACGACCTCTCAGATC...CACCCTTCTAAAAGAGGGTGTGGTGACAACTTGAGAATGGATATGAATATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTATCCAGAGATAAGGGGTaGGCACGTGGTATAGCTCTT +
Preference number: 5 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVSRDKG*ARGIAL
Trigger: AAGAGCTATACCACGTGCCAACCCCTTATCTCTGGA...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGACACGTACTATAAGCTaGCTTGAAGATAGAAGTACA +
Preference number: 5 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWTRTIS*LEDRST
Trigger: TGTACTTCTATCTTCAAGCAAGCTTATAGTACGTGT...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ACCATCCCTTTGGTTGGTAGGCAAGGAAAAATAGAAGTCAACTCGGTTCTTTGGCTCTGCAATCATCTCTaGAAAATGTTTCAAGACACA +
Preference number: 5 (lower is better)
Translates to: TIPLVGRQGKIEVNSVLWLCNHL*KMFQDT
Trigger: TGTGTCTTGAAACATTTTCAAGAGATGATTGCAGAG...CCAAAGAACCGAGTTGACTTCTATTTTTCCTTGCCTACCAACCAAAGGGATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAAGTGCGAGGACAAGGTaGGTAAGCTTTCAAGACTGG +
Preference number: 5 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRSARTR*VSFQDW
Trigger: CCAGTCTTGAAAGCTTACCAACCTTGTCCTCGCACT...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTACGCGAAGTATTCGTCTaGGGTGAAAAGAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVREVFV*GEKSNE
Trigger: CTCATTGCTCTTTTCACCCAAGACGAATACTTCGCG...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAGCATCTTTCACTTCTTaGGCTTCTTTGCATTCTTTC +
Preference number: 5 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGASFTS*ASLHSF
Trigger: GAAAGAATGCAAAGAAGCCAAAGAAGTGAAAGATGC...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGGAGGGAGCTGGTGTATaGCTCTCTCTTTTAGTGAAG +
Preference number: 5 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLEGAGV*LSLLVK
Trigger: CTTCACTAAAAGAGAGAGCAATACACCAGCTCCCTC...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTAGGTCGTTTGCTGGATTaGGAAATGGCACTCCAAACT +
Preference number: 5 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVGRLLD*EMALQT
Trigger: AGTTTGGAGTGCCATTTCCAAATCCAGCAAACGACC...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCAGCCACACTGCGTTATTaGATTAGGTTGGAAAAAGAG +
Preference number: 5 (lower is better)
Translates to: TFSKVQVPKILIQFTSEAATLRY*IRLEKE
Trigger: CTCTTTTTCCAACCTAATCAAATAACGCAGTGTGGC...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAAGAACAAGATTGCATTaGTTATGCAGTACCTGTGAC +
Preference number: 5 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKRTRLH*LCSTCD
Trigger: GTCACAGGTACTGCATAACAAATGCAATCTTGTTCT...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAAAATATCCATTCTCAAGTaGTCACCACACCCTCTTTTA +
Preference number: 5 (lower is better)
Translates to: YRVAKSSPKTANEMFTRKISILK*SPHPLL
Trigger: TAAAAGAGGGTGTGGTGACAACTTGAGAATGGATAT...TTTCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCATCTGAATTGAATCCTTaGGCAAGCCAAAGCATCCTT +
Preference number: 5 (lower is better)
Translates to: TFSKVQVPKILIQFTSEASELNP*ASQSIL
Trigger: AAGGATGCTTTGGCTTGCCAAAGGATTCAATTCAGA...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGACATAACATTACTAATTaGGCTGACCGATTCTCTCAC +
Preference number: 5 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGHNITN*ADRFSH
Trigger: GTGAGAGAATCGGTCAGCCAAATTAGTAATGTTATG...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGAGAGTGGCGCTTTTTaGAAGCAGAGACATTTTGAG +
Preference number: 5 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRESGAF*KQRHFE
Trigger: CTCAAAATGTCTCTGCTTCAAAAAAGCGCCACTCTC...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAAACTTTCCAGGTAACATaGGCACATACTCACTGTTGT +
Preference number: 5 (lower is better)
Translates to: FTKEDKAKATQSISVKQKTFQVT*AHTHCC
Trigger: ACAACAGTGAGTATGTGCCAATGTTACCTGGAAAGT...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGCTCATGTGTGGGCTTTaGTGGTTTTGGCTTGATTTT +
Preference number: 5 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLLMCGL*WFWLDF
Trigger: AAAATCAAGCCAAAACCACAAAAGCCCACACATGAG...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATAATAGGATCATTCAATaGCCAGAGTCCACTTGTAGG +
Preference number: 5 (lower is better)
Translates to: ELTENYFDYTQSSFLREDNRIIQ*PESTCR
Trigger: CCTACAAGTGGACTCTGGCAATTGAATGATCCTATT...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp TATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGATGTTTACAAGGAACACGTACTATAAGCTaGCTTGAAGATAGAAGTACA +
Preference number: 5 (lower is better)
Translates to: YTELQSRLPKLQTRCLQGTRTIS*LEDRST
Trigger: TGTACTTCTATCTTCAAGCAAGCTTATAGTACGTGT...TCCTTGTAAACATCTCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGGCCACACTGCGTTATTaGATTAGGTTGGAAAAAGAG +
Preference number: 5 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLATLRY*IRLEKE
Trigger: CTCTTTTTCCAACCTAATCAAATAACGCAGTGTGGC...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGACTGAGAAGCCTAAGTTaGTTCCCAAAACAGGGGATT +
Preference number: 5 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRLRSLS*FPKQGI
Trigger: AATCCCCTGTTTTGGGAACAAACTTAGGCTTCTCAG...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp TTTACAAAGGAAGACAAAGCCAAAGCAACTCAAAGCATATCTGTGAAGCAGAAAGCTTCTAAAATCTACTaGCCTGACTGCCAAAAGCAA +
Preference number: 5 (lower is better)
Translates to: FTKEDKAKATQSISVKQKASKIY*PDCQKQ
Trigger: TTGCTTTTGGCAGTCAGGCAAGTAGATTTTAGAAGC...TTTCTGCTTCACAGATATGCTTTGAGTTGCTTTGGCTTTGTCTTCCTTTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp GTACCTGTGACTATGTGTACCTGTTACTATTTGTATAATACGTACTACTGTGTAAGAGTGAGCCAGGCATaGTGCAGAGAAACAGATTTT +
Preference number: 5 (lower is better)
Translates to: VPVTMCTCYYLYNTYYCVRVSQA*CRETDF
Trigger: AAAATCTGTTTCTCTGCACAATGCCTGGCTCACTCT...TACACAGTAGTACGTATTATACAAATAGTAACAGGTACACATAGTCACAGGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAAATAGGATCATTCAATaGCCAGAGTCCACTTGTAGG +
Preference number: 5 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRNRIIQ*PESTCR
Trigger: CCTACAAGTGGACTCTGGCAATTGAATGATCCTATT...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ACGTTCTCAAAGGTCCAGGTACCTAAAATCTTAATTCAGTTTACATCAGAGGCATTGGTACATCTTATATaGGCTCAATATCCAGAAGGA +
Preference number: 5 (lower is better)
Translates to: TFSKVQVPKILIQFTSEALVHLI*AQYPEG
Trigger: TCCTTCTGGATATTGAGCCAATATAAGATGTACCAA...TGCCTCTGATGTAAACTGAATTAAGATTTTAGGTACCTGGACCTTTGAGAACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATCTGATAGCAACAAGTTaGGCAGTAGTACACTCAAAA +
Preference number: 5 (lower is better)
Translates to: ELTENYFDYTQSSFLREDLIATS*AVVHSK
Trigger: TTTTGAGTGTACTACTGCCAAACTTGTTGCTATCAG...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp GAACTAACAGAGAACTATTTTGACTATACCCAGTCATCATTTCTGAGGGAAGATACAATGGCAATAGTTTaGGGACAGAATGCTCAAAAG +
Preference number: 5 (lower is better)
Translates to: ELTENYFDYTQSSFLREDTMAIV*GQNAQK
Trigger: CTTTTGAGCATTCTGTCCCAAAACTATTGCCATTGT...ATCTTCCCTCAGAAATGATGACTGGGTATAGTCAAAATAGTTCTCTGTTAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGGATTTAAGTACAGCATaGGTGATGGTCTCTAGACTC +
Preference number: 5 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLDLSTA*VMVSRL
Trigger: GAGTCTAGAGACCATCACCAATGCTGTACTTAAATC...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAGCATCTTTCACTTCTTaGGCTTCTTTGCATTCTTTC +
Preference number: 5 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRASFTS*ASLHSF
Trigger: GAAAGAATGCAAAGAAGCCAAAGAAGTGAAAGATGC...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGTTGGTACATCTTATATaGGCTCAATATCCAGAAGGA +
Preference number: 5 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLLVHLI*AQYPEG
Trigger: TCCTTCTGGATATTGAGCCAATATAAGATGTACCAA...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp CAAGATTGCATTTGTTATGCAGTACCTGTGACTATGTGTACCTGTTACTATTTGTACACTACTTCAAAGTaGCACATTAAATGCGAAGCA +
Preference number: 5 (lower is better)
Translates to: QDCICYAVPVTMCTCYYLYTTSK*HIKCEA
Trigger: TGCTTCGCATTTAATGTGCAACTTTGAAGTAGTGTA...CAAATAGTAACAGGTACACATAGTCACAGGTACTGCATAACAAATGCAATCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAAGAACAAGATTGCATTaGTTATGCAGTACCTGTGAC +
Preference number: 5 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRRTRLH*LCSTCD
Trigger: GTCACAGGTACTGCATAACAAATGCAATCTTGTTCT...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGAAAACACTATACAGAGTaGCAAAGTCGTCTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRKHYTE*QSRLPK
Trigger: TTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTT...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS-3UTR CAA 90 bp ATATATATAAACACTATACAGAGTTGCAAAGTCGTCTCCCAAAACTGCAAACGACAACATTCCACAATGTaGTACACAGTAGAATTACTC +
Preference number: 5 (lower is better)
Translates to: IYINTIQSCKVVSQNCKRQHSTM*YTVELL
Trigger: GAGTAATTCTACTGTGTACAACATTGTGGAATGTTG...TCGTTTGCAGTTTTGGGAGACGACTTTGCAACTCTGTATAGTGTTTATATATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS-3UTR CAA 90 bp ATATCCAGAAGGAAACAAGGCCTTATAAGAGGTTCTTTTTGGCTTAAGTTTTTGAGATACATACACTATTaGTGTTTGGGCAGTGAAGAT +
Preference number: 5 (lower is better)
Translates to: ISRRKQGLIRGSFWLKFLRYIHY*CLGSED
Trigger: ATCTTCACTGCCCAAACACAAATAGTGTATGTATCT...CAAAAACTTAAGCCAAAAAGAACCTCTTATAAGGCCTTGTTTCCTTCTGGATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS CCA 72 bp CTCCGGGGGTCTTGGCACCCGGCGACTGCGAGGTGGTaGTTCCGGAGCGGCAGCTGCAGCGGCAGCCCCGCC +
Preference number: 6 (lower is better)
Translates to: LRGSWHPATARW*FRSGSCSGSPA
Trigger: GGCGGGGCTGCCGCTGCAGCTGCCGCTCCGGAACCACCACCTCGCAGTCGCCGGGTGCCAAGACCCCCGGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 72 bp GGCAGAGGCGGAGTCAAATCCAGCAGCTGCGGCTGCTaGGCCGATGCCCGGGGCTGCGGCGAGCGCGGAGGC +
Preference number: 6 (lower is better)
Translates to: GRGGVKSSSCGC*ADARGCGERGG
Trigger: GCCTCCGCGCTCGCCGCAGCCCCGGGCATCGGCGCAGCAGCCGCAGCTGCTGGATTTGACTCCGCCTCTGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp TCTCTCCGGGGGTCTTGGCACCCGGCGACTGCGAGGTaGTGGTTCCGGAGCGGCAGCTGCAGCGGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: SLRGSWHPATAR*WFRSGSCSGSP
Trigger: GGGGCTGCCGCTGCAGCTGCCGCTCCGGAACCACCACCTCGCAGTCGCCGGGTGCCAAGACCCCCGGAGAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 90 bp GGCTCTCCGTCCGGCTGCGCGCCGAGCGTGCCGCAGCGGCGGCGCTaGCTCTCGAGGATGAGGCGGCTGAGCAGCAAGTACCAGCTTTCC +
Preference number: 6 (lower is better)
Translates to: GSPSGCAPSVPQRRR*LSRMRRLSSKYQLS
Trigger: GGAAAGCTGGTACTTGCTGCTCAGCCGCCTCATCCTCGAGAGCAAGCGCCGCCGCTGCGGCACGCTCGGCGCGCAGCCGGACGGAGAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 72 bp AAACCAGCGGGCAGAGGCGGAGTCAAATCCAGCAGCTaGGGCTGCTGCGCCGATGCCCGGGGCTGCGGCGAG +
Preference number: 6 (lower is better)
Translates to: KPAGRGGVKSSS*GCCADARGCGE
Trigger: CTCGCCGCAGCCCCGGGCATCGGCGCAGCAGCCGCAGCTGCTGGATTTGACTCCGCCTCTGCCCGCTGGTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS TCA 72 bp CCCGACGGGCAGGTCCTCCTCTTCGGACTCGGAGTCTaGCCGGGAGCCAGTGGCCGTGGAGAGCCACATGGC +
Preference number: 6 (lower is better)
Translates to: PDGQVLLFGLGV*PGASGRGEPHG
Trigger: GCCATGTGGCTCTCCACGGCCACTGGCTCCCGGTCAGACTCCGAGTCCGAAGAGGAGGACCTGCCCGTCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp GGGGCTGCGGCGAGCGCGGAGGCCGCAGCTACAACTTaGCTGAGGGCTAAAGTCGGCTCTGCAGCCGAAGCG +
Preference number: 6 (lower is better)
Translates to: GAAASAEAAATT*LRAKVGSAAEA
Trigger: CGCTTCGGCTGCAGAGCCGACTTTAGCCCTCAGCCAAGTTGTAGCTGCGGCCTCCGCGCTCGCCGCAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 72 bp GACAGGCGAGCTCCATTGTTCGGGGCTTCTGCAGGGTaGCGGGGACGTGCTGGGCTGGGTGCTAAGCGGCGA +
Preference number: 6 (lower is better)
Translates to: DRRAPLFGASAG*RGRAGLGAKRR
Trigger: TCGCCGCTTAGCACCCAGCCCAGCACGTCCCCGGCACCCTGCAGAAGCCCCGAACAATGGAGCTCGCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp CTTCGGACTCGGAGTCTGACCGGGAGCCAGTGGCCGTaGAGAGCCACATGGCTCCCGGACAAGACGACCCGG +
Preference number: 6 (lower is better)
Translates to: LRTRSLTGSQWP*RATWLPDKTTR
Trigger: CCGGGTCGTCTTGTCCGGGAGCCATGTGGCTCTCCACGGCCACTGGCTCCCGGTCAGACTCCGAGTCCGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS TCA 72 bp GCCACATGGCTCCCGGACAAGACGACCCGGTCCCAATaGGTGCGGTCGGGGTTCCCGAGGAAAGAAGCGGGG +
Preference number: 6 (lower is better)
Translates to: ATWLPDKTTRSQ*VRSGFPRKEAG
Trigger: CCCCGCTTCTTTCCTCGGGAACCCCGACCGCACTCATTGGGACCGGGTCGTCTTGTCCGGGAGCCATGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS TCA 72 bp CTGCGGCGAGCGCGGAGGCCGCAGCTACAACTTGGCTaGGGGCTAAAGTCGGCTCTGCAGCCGAAGCGACAG +
Preference number: 6 (lower is better)
Translates to: LRRARRPQLQLG*GLKSALQPKRQ
Trigger: CTGTCGCTTCGGCTGCAGAGCCGACTTTAGCCCTCAGCCAAGTTGTAGCTGCGGCCTCCGCGCTCGCCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp CCTCCTCTTCGGACTCGGAGTCTGACCGGGAGCCAGTaGCCGTGGAGAGCCACATGGCTCCCGGACAAGACG +
Preference number: 6 (lower is better)
Translates to: PPLRTRSLTGSQ*PWRATWLPDKT
Trigger: CGTCTTGTCCGGGAGCCATGTGGCTCTCCACGGCCACTGGCTCCCGGTCAGACTCCGAGTCCGAAGAGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp ACCTGCGCCCTCTGGGCAGGTGCAGTCTTCCTCGCCTaGAGTGGGCCACAGGCTCGCTGGGTGTTACGAAGC +
Preference number: 6 (lower is better)
Translates to: TCALWAGAVFLA*SGPQARWVLRS
Trigger: GCTTCGTAACACCCAGCGAGCCTGTGGCCCACTCCAGGCGAGGAAGACTGCACCTGCCCAGAGGGCGCAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS TCA 72 bp GGGCCACAGGCTCGCTGGGTGTTACGAAGCGCCTGGTaGAAAGCATCTCGTCTTCCCCGTCGCCGATGGCCC +
Preference number: 6 (lower is better)
Translates to: GPQARWVLRSAW*KASRLPRRRWP
Trigger: GGGCCATCGGCGACGGGGAAGACGAGATGCTTTTCACCAGGCGCTTCGTAACACCCAGCGAGCCTGTGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 72 bp CATGGCTCCCGGACAAGACGACCCGGTCCCAATGAGTaGGGTCGGGGTTCCCGAGGAAAGAAGCGGGGTGGT +
Preference number: 6 (lower is better)
Translates to: HGSRTRRPGPNE*GRGSRGKKRGG
Trigger: ACCACCCCGCTTCTTTCCTCGGGAACCCCGACCGCACTCATTGGGACCGGGTCGTCTTGTCCGGGAGCCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 72 bp TCTTCCCCGTCGCCGATGGCCCTGAGGTGGCAAAACTaGTCAAAGCGGGACCTTCTGAGCCAGCCTCCCGGC +
Preference number: 6 (lower is better)
Translates to: SSPSPMALRWQN*SKRDLLSQPPG
Trigger: GCCGGGAGGCTGGCTCAGAAGGTCCCGCTTTGAGCAGTTTTGCCACCTCAGGGCCATCGGCGACGGGGAAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp CAGCCGCCGCGGCGCGGACACTGTGCCGGAACTTCCTaGCATTTTCGTAGTATTCCAGCCGAGCTGGGGCGT +
Preference number: 6 (lower is better)
Translates to: QPPRRGHCAGTS*HFRSIPAELGR
Trigger: ACGCCCCAGCTCGGCTGGAATACTACGAAAATGCCAGGAAGTTCCGGCACAGTGTCCGCGCCGCGGCGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 90 bp GCCCCGCCAGCCTGGTTATCACCTCTGGCAAGGTTTGCAGATGGGTaGTGGGCTCCAGGGTTCGAGCCACCGGCAACGTCTTGGGCTCCC +
Preference number: 6 (lower is better)
Translates to: APPAWLSPLARFADG*WAPGFEPPATSWAP
Trigger: GGGAGCCCAAGACGTTGCCGGTGGCTCGAACCCTGGAGCCCACAACCCATCTGCAAACCTTGCCAGAGGTGATAACCAGGCTGGCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 90 bp CTGCAGCGGCAGCCCCGCCAGCCTGGTTATCACCTCTGGCAAGGTTaGCAGATGGGTTGTGGGCTCCAGGGTTCGAGCCACCGGCAACGT +
Preference number: 6 (lower is better)
Translates to: LQRQPRQPGYHLWQG*QMGCGLQGSSHRQR
Trigger: ACGTTGCCGGTGGCTCGAACCCTGGAGCCCACAACCCATCTGCAAACCTTGCCAGAGGTGATAACCAGGCTGGCGGGGCTGCCGCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 90 bp CGTGAGTGTCGTCGTCGTTGTCAGAATCTTCTCTCTCCGGGGGTCTaGGCACCCGGCGACTGCGAGGTGGTGGTTCCGGAGCGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: RECRRRCQNLLSPGV*APGDCEVVVPERQL
Trigger: CAGCTGCCGCTCCGGAACCACCACCTCGCAGTCGCCGGGTGCCAAGACCCCCGGAGAGAGAAGATTCTGACAACGACGACGACACTCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 72 bp AAAAGCTGGCCGGCACTGAAACCGCTCTCCTTGACCTaGGCCCTCTGGGCAGGTGCAGTCTTCCTCGCCTGG +
Preference number: 6 (lower is better)
Translates to: KSWPALKPLSLT*ALWAGAVFLAW
Trigger: CCAGGCGAGGAAGACTGCACCTGCCCAGAGGGCGCAGGTCAAGGAGAGCGGTTTCAGTGCCGGCCAGCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp TGCTCCGAGTGTCCACAGCGACGGATGCTCAGGAGCTaGACGACCACGCTGGCCACTTCGGTGTTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: CSECPQRRMLRS*TTTLATSVFSL
Trigger: GAGGCTGAACACCGAAGTGGCCAGCGTGGTCGTCCAGCTCCTGAGCATCCGTCGCTGTGGACACTCGGAGCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp CTGCAGCGGCAGCCCCGCCAGCCTGGTTATCACCTCTaGCAAGGTTTGCAGATGGGTTGTGGGCTCCAGGGT +
Preference number: 6 (lower is better)
Translates to: LQRQPRQPGYHL*QGLQMGCGLQG
Trigger: ACCCTGGAGCCCACAACCCATCTGCAAACCTTGCCAGAGGTGATAACCAGGCTGGCGGGGCTGCCGCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp GTCGTCGTTGTCAGAATCTTCTCTCTCCGGGGGTCTTaGCACCCGGCGACTGCGAGGTGGTGGTTCCGGAGC +
Preference number: 6 (lower is better)
Translates to: VVVVRIFSLRGS*HPATARWWFRS
Trigger: GCTCCGGAACCACCACCTCGCAGTCGCCGGGTGCCAAGACCCCCGGAGAGAGAAGATTCTGACAACGACGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 72 bp CGTCGTCGTTGTCAGAATCTTCTCTCTCCGGGGGTCTaGGCACCCGGCGACTGCGAGGTGGTGGTTCCGGAG +
Preference number: 6 (lower is better)
Translates to: RRRCQNLLSPGV*APGDCEVVVPE
Trigger: CTCCGGAACCACCACCTCGCAGTCGCCGGGTGCCAAGACCCCCGGAGAGAGAAGATTCTGACAACGACGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 90 bp TTGCCAGAGCCAGAACCAGACACTTCAGAAGACAGGCGAGCTCCATaGTTCGGGGCTTCTGCAGGGTGCCGGGGACGTGCTGGGCTGGGT +
Preference number: 6 (lower is better)
Translates to: LPEPEPDTSEDRRAP*FGASAGCRGRAGLG
Trigger: ACCCAGCCCAGCACGTCCCCGGCACCCTGCAGAAGCCCCGAACAATGGAGCTCGCCTGTCTTCTGAAGTGTCTGGTTCTGGCTCTGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 72 bp CAGCCCCGCCAGCCTGGTTATCACCTCTGGCAAGGTTaGCAGATGGGTTGTGGGCTCCAGGGTTCGAGCCAC +
Preference number: 6 (lower is better)
Translates to: QPRQPGYHLWQG*QMGCGLQGSSH
Trigger: GTGGCTCGAACCCTGGAGCCCACAACCCATCTGCAAACCTTGCCAGAGGTGATAACCAGGCTGGCGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp CACAGCGACGGATGCTCAGGAGCTGGACGACCACGCTaGCCACTTCGGTGTTCAGCCTCACAAACACGACCT +
Preference number: 6 (lower is better)
Translates to: HSDGCSGAGRPR*PLRCSASQTRP
Trigger: AGGTCGTGTTTGTGAGGCTGAACACCGAAGTGGCCAGCGTGGTCGTCCAGCTCCTGAGCATCCGTCGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp AGCATCTCGTCTTCCCCGTCGCCGATGGCCCTGAGGTaGCAAAACTGCTCAAAGCGGGACCTTCTGAGCCAG +
Preference number: 6 (lower is better)
Translates to: SISSSPSPMALR*QNCSKRDLLSQ
Trigger: CTGGCTCAGAAGGTCCCGCTTTGAGCAGTTTTGCCACCTCAGGGCCATCGGCGACGGGGAAGACGAGATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp GCCAGCCTGGTTATCACCTCTGGCAAGGTTTGCAGATaGGTTGTGGGCTCCAGGGTTCGAGCCACCGGCAAC +
Preference number: 6 (lower is better)
Translates to: ASLVITSGKVCR*VVGSRVRATGN
Trigger: GTTGCCGGTGGCTCGAACCCTGGAGCCCACAACCCATCTGCAAACCTTGCCAGAGGTGATAACCAGGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 72 bp CCAGAACCAGACACTTCAGAAGACAGGCGAGCTCCATaGTTCGGGGCTTCTGCAGGGTGCCGGGGACGTGCT +
Preference number: 6 (lower is better)
Translates to: PEPDTSEDRRAP*FGASAGCRGRA
Trigger: AGCACGTCCCCGGCACCCTGCAGAAGCCCCGAACAATGGAGCTCGCCTGTCTTCTGAAGTGTCTGGTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 72 bp AGACACAGCCGGAACACGCCGCTCAGCTCTTTTCTGTaGCCCAGCCCCCTGGGTTTGACTATTACCTGCCAC +
Preference number: 6 (lower is better)
Translates to: RHSRNTPLSSFL*PSPLGLTITCH
Trigger: GTGGCAGGTAATAGTCAAACCCAGGGGGCTGGGGCACAGAAAAGAGCTGAGCGGCGTGTTCCGGCTGTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 72 bp AGAAGAAATACTGCTCCGAGTGTCCACAGCGACGGATaGTCAGGAGCTGGACGACCACGCTGGCCACTTCGG +
Preference number: 6 (lower is better)
Translates to: RRNTAPSVHSDG*SGAGRPRWPLR
Trigger: CCGAAGTGGCCAGCGTGGTCGTCCAGCTCCTGAGCATCCGTCGCTGTGGACACTCGGAGCAGTATTTCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp GCCGCCGCTGCTGCACCTCTTAGTCTTCTTGTCGCTTaGTCGCGAGTGAAGGAGCAACTCGCCATGGTGATG +
Preference number: 6 (lower is better)
Translates to: AAAAAPLSLLVA*SRVKEQLAMVM
Trigger: CATCACCATGGCGAGTTGCTCCTTCACTCGCGACCAAGCGACAAGAAGACTAAGAGGTGCAGCAGCGGCGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 72 bp GCCTGGTTATCACCTCTGGCAAGGTTTGCAGATGGGTaGTGGGCTCCAGGGTTCGAGCCACCGGCAACGTCT +
Preference number: 6 (lower is better)
Translates to: AWLSPLARFADG*WAPGFEPPATS
Trigger: AGACGTTGCCGGTGGCTCGAACCCTGGAGCCCACAACCCATCTGCAAACCTTGCCAGAGGTGATAACCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp TACCTTGCATCTGCTCGCTGGCTCACGGAAAAGCACTaGTATAGGGTGATCACGCGCCGCGGTGGAATGAGC +
Preference number: 6 (lower is better)
Translates to: YLASARWLTEKH*YRVITRRGGMS
Trigger: GCTCATTCCACCGCGGCGCGTGATCACCCTATACCAGTGCTTTTCCGTGAGCCAGCGAGCAGATGCAAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp TGGTTATCACCTCTGGCAAGGTTTGCAGATGGGTTGTaGGCTCCAGGGTTCGAGCCACCGGCAACGTCTTGG +
Preference number: 6 (lower is better)
Translates to: WLSPLARFADGL*APGFEPPATSW
Trigger: CCAAGACGTTGCCGGTGGCTCGAACCCTGGAGCCCACAACCCATCTGCAAACCTTGCCAGAGGTGATAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS TCA 72 bp GCAGAGACAGCGGCTCTGGCTGCTGCAAAGAAACTTTaGGAACGGCTTTGTGGGCGTCTTCTCTCCTGCTCT +
Preference number: 6 (lower is better)
Translates to: AETAALAAAKKL*ERLCGRLLSCS
Trigger: AGAGCAGGAGAGAAGACGCCCACAAAGCCGTTCTCAAAGTTTCTTTGCAGCAGCCAGAGCCGCTGTCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 72 bp TCATGCATGTTTTGGGCAACCACACAGTCATCGACCTaGATCCAGAGCTCTCCCGGACCGATGACAGTGGAC +
Preference number: 6 (lower is better)
Translates to: SCMFWATTQSST*IQSSPGPMTVD
Trigger: GTCCACTGTCATCGGTCCGGGAGAGCTCTGGATGCAGGTCGATGACTGTGTGGTTGCCCAAAACATGCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 72 bp GTTCGAGCCACCGGCAACGTCTTGGGCTCCCCTTACTaGTTCGGCATCAGCAGCATTAGCAACAGGTTGAAA +
Preference number: 6 (lower is better)
Translates to: VRATGNVLGSPY*FGISSISNRLK
Trigger: TTTCAACCTGTTGCTAATGCTGCTGATGCCGAAGCAGTAAGGGGAGCCCAAGACGTTGCCGGTGGCTCGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp GGGTCATCCTCATCTTCATCAAAAGCTCTGGCTCTGTaGGGACCTCGAGCTGCACCTTCTGGGATCTCTGCA +
Preference number: 6 (lower is better)
Translates to: GSSSSSSKALAL*GPRAAPSGISA
Trigger: TGCAGAGATCCCAGAAGGTGCAGCTCGAGGTCCCCACAGAGCCAGAGCTTTTGATGAAGATGAGGATGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp GCACGTATGGGTCATCCTCATCTTCATCAAAAGCTCTaGCTCTGTGGGGACCTCGAGCTGCACCTTCTGGGA +
Preference number: 6 (lower is better)
Translates to: ARMGHPHLHQKL*LCGDLELHLLG
Trigger: TCCCAGAAGGTGCAGCTCGAGGTCCCCACAGAGCCAGAGCTTTTGATGAAGATGAGGATGACCCATACGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp CTCCTGCTCTTCTTCCTGCAGCAGCCTAGCTACAGGTaGTGGTTCAGAACATCGGCTGGGGGAGAGAGAAAT +
Preference number: 6 (lower is better)
Translates to: LLLFFLQQPSYR*WFRTSAGGERN
Trigger: ATTTCTCTCTCCCCCAGCCGATGTTCTGAACCACCACCTGTAGCTAGGCTGCTGCAGGAAGAAGAGCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 72 bp AGCAGAGACAGCGGCTCTGGCTGCTGCAAAGAAACTTaGAGAACGGCTTTGTGGGCGTCTTCTCTCCTGCTC +
Preference number: 6 (lower is better)
Translates to: SRDSGSGCCKET*RTALWASSLLL
Trigger: GAGCAGGAGAGAAGACGCCCACAAAGCCGTTCTCAAAGTTTCTTTGCAGCAGCCAGAGCCGCTGTCTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 72 bp CCTTACTGCTTCGGCATCAGCAGCATTAGCAACAGGTaGAAACCAGCGGGCAGAGGCGGAGTCAAATCCAGC +
Preference number: 6 (lower is better)
Translates to: PYCFGISSISNR*KPAGRGGVKSS
Trigger: GCTGGATTTGACTCCGCCTCTGCCCGCTGGTTTCAACCTGTTGCTAATGCTGCTGATGCCGAAGCAGTAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS TCA 72 bp CTTACTGCTTCGGCATCAGCAGCATTAGCAACAGGTTaGAACCAGCGGGCAGAGGCGGAGTCAAATCCAGCA +
Preference number: 6 (lower is better)
Translates to: LTASASAALATG*NQRAEAESNPA
Trigger: TGCTGGATTTGACTCCGCCTCTGCCCGCTGGTTTCAACCTGTTGCTAATGCTGCTGATGCCGAAGCAGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 72 bp ATGACAGTGGACCTGCCTACTTCCAAGAAGAAATACTaGTCCGAGTGTCCACAGCGACGGATGCTCAGGAGC +
Preference number: 6 (lower is better)
Translates to: MTVDLPTSKKKY*SECPQRRMLRS
Trigger: GCTCCTGAGCATCCGTCGCTGTGGACACTCGGAGCAGTATTTCTTCTTGGAAGTAGGCAGGTCCACTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 72 bp GATGCTGTAGCTGCGGCAGCGGGCTCTGTATTCGTCTaGACACAAGGCTCTCATCTTCTCCAAAAACAGCTC +
Preference number: 6 (lower is better)
Translates to: DAVAAAAGSVFV*TQGSHLLQKQL
Trigger: GAGCTGTTTTTGGAGAAGATGAGAGCCTTGTGTGCAGACGAATACAGAGCCCGCTGCCGCAGCTACAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 72 bp GCTGTCTGTTGGAAAAGCAGAGACAGCGGCTCTGGCTaGTGCAAAGAAACTTTGAGAACGGCTTTGTGGGCG +
Preference number: 6 (lower is better)
Translates to: AVCWKSRDSGSG*CKETLRTALWA
Trigger: CGCCCACAAAGCCGTTCTCAAAGTTTCTTTGCAGCAGCCAGAGCCGCTGTCTCTGCTTTTCCAACAGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp AGAGCAATGAGGTGTCGGTACCTTGCATCTGCTCGCTaGCTCACGGAAAAGCACTGGTATAGGGTGATCACG +
Preference number: 6 (lower is better)
Translates to: RAMRCRYLASAR*LTEKHWYRVIT
Trigger: CGTGATCACCCTATACCAGTGCTTTTCCGTGAGCCAGCGAGCAGATGCAAGGTACCGACACCTCATTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp ATAATCACTGGAGCTTACAAGAGGGGTGGCCACCCCTaGCCTCATTGGCACGTATGGGTCATCCTCATCTTC +
Preference number: 6 (lower is better)
Translates to: IITGAYKRGGHP*PHWHVWVILIF
Trigger: GAAGATGAGGATGACCCATACGTGCCAATGAGGCCAGGGGTGGCCACCCCTCTTGTAAGCTCCAGTGATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp CCATTGGCATATAATCACTGGAGCTTACAAGAGGGGTaGCCACCCCTGGCCTCATTGGCACGTATGGGTCAT +
Preference number: 6 (lower is better)
Translates to: PLAYNHWSLQEG*PPLASLARMGH
Trigger: ATGACCCATACGTGCCAATGAGGCCAGGGGTGGCCACCCCTCTTGTAAGCTCCAGTGATTATATGCCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp CTGCTCTTCTTCCTGCAGCAGCCTAGCTACAGGTGGTaGTTCAGAACATCGGCTGGGGGAGAGAGAAATATC +
Preference number: 6 (lower is better)
Translates to: LLFFLQQPSYRW*FRTSAGGERNI
Trigger: GATATTTCTCTCTCCCCCAGCCGATGTTCTGAACCACCACCTGTAGCTAGGCTGCTGCAGGAAGAAGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 72 bp GTCTTGGGTGAAAAGAGCAATGAGGTGTCGGTACCTTaGATCTGCTCGCTGGCTCACGGAAAAGCACTGGTA +
Preference number: 6 (lower is better)
Translates to: VLGEKSNEVSVP*ICSLAHGKALV
Trigger: TACCAGTGCTTTTCCGTGAGCCAGCGAGCAGATGCAAGGTACCGACACCTCATTGCTCTTTTCACCCAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp GAACTTCCTGGCATTTTCGTAGTATTCCAGCCGAGCTaGGGCGTCAGCAGTCTCGAGTTTGAGCACGAAGTA +
Preference number: 6 (lower is better)
Translates to: ELPGIFVVFQPS*GVSSLEFEHEV
Trigger: TACTTCGTGCTCAAACTCGAGACTGCTGACGCCCCAGCTCGGCTGGAATACTACGAAAATGCCAGGAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp AGCTCTGGCTCTGTGGGGACCTCGAGCTGCACCTTCTaGGATCTCTGCATCTTTCACTTCTTTGGCTTCTTT +
Preference number: 6 (lower is better)
Translates to: SSGSVGTSSCTF*DLCIFHFFGFF
Trigger: AAAGAAGCCAAAGAAGTGAAAGATGCAGAGATCCCAGAAGGTGCAGCTCGAGGTCCCCACAGAGCCAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp AGTATCAGGTGCTTTTGGAGGACTCGGAGCAGGTGGTaGGCTCACTCTGGGAAACATCATCATGTACCCTCT +
Preference number: 6 (lower is better)
Translates to: SIRCFWRTRSRW*AHSGKHHHVPS
Trigger: AGAGGGTACATGATGATGTTTCCCAGAGTGAGCCCACCACCTGCTCCGAGTCCTCCAAAAGCACCTGATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp ATTAGTATCAGGTGCTTTTGGAGGACTCGGAGCAGGTaGTGGGCTCACTCTGGGAAACATCATCATGTACCC +
Preference number: 6 (lower is better)
Translates to: ISIRCFWRTRSR*WAHSGKHHHVP
Trigger: GGGTACATGATGATGTTTCCCAGAGTGAGCCCACCACCTGCTCCGAGTCCTCCAAAAGCACCTGATACTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 72 bp CTGAAGGCTTTGAAGGTGATCCCCCATCTCCAGGCTTaGAGAATGATCCCTCACCTGAAGGCTTTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: LKALKVIPHLQA*RMIPHLKALKL
Trigger: CAGCTTCAAAGCCTTCAGGTGAGGGATCATTCTCAAAGCCTGGAGATGGGGGATCACCTTCAAAGCCTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 72 bp GGAAGTGGCCACCTAGCACTGTCCAGAGATAAGGGGTaGGCACGTGGTATAGCTCTTAAAAGATCTGAGAGG +
Preference number: 6 (lower is better)
Translates to: GSGHLALSRDKG*ARGIALKRSER
Trigger: CCTCTCAGATCTTTTAAGAGCTATACCACGTGCCAACCCCTTATCTCTGGACAGTGCTAGGTGGCCACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 90 bp AGACTTCTTTGTCTAGGCCCCTCCCCAGGAACTTTCCAGGTAACATaGGCACATACTCACTGTTGTCATTCTGTCCCAAAGGTGAGCTCC +
Preference number: 6 (lower is better)
Translates to: RLLCLGPSPGTFQVT*AHTHCCHSVPKVSS
Trigger: GGAGCTCACCTTTGGGACAGAATGACAACAGTGAGTATGTGCCAATGTTACCTGGAAAGTTCCTGGGGAGGGGCCTAGACAAAGAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 90 bp GCTCATGATCTGAAGGCTTTGAAGGTGATCCCCCATCTCCAGGCTTaGAGAATGATCCCTCACCTGAAGGCTTTGAAGCTGCATCTTTGG +
Preference number: 6 (lower is better)
Translates to: AHDLKALKVIPHLQA*RMIPHLKALKLHLW
Trigger: CCAAAGATGCAGCTTCAAAGCCTTCAGGTGAGGGATCATTCTCAAAGCCTGGAGATGGGGGATCACCTTCAAAGCCTTCAGATCATGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS GCA 72 bp TTCATCAAAAGCTCTGGCTCTGTGGGGACCTCGAGCTaGACCTTCTGGGATCTCTGCATCTTTCACTTCTTT +
Preference number: 6 (lower is better)
Translates to: FIKSSGSVGTSS*TFWDLCIFHFF
Trigger: AAAGAAGTGAAAGATGCAGAGATCCCAGAAGGTGCAGCTCGAGGTCCCCACAGAGCCAGAGCTTTTGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp CTTTTGGAGGACTCGGAGCAGGTGGTGGGCTCACTCTaGGAAACATCATCATGTACCCTCTTGAATCTTCAA +
Preference number: 6 (lower is better)
Translates to: LLEDSEQVVGSL*ETSSCTLLNLQ
Trigger: TTGAAGATTCAAGAGGGTACATGATGATGTTTCCCAGAGTGAGCCCACCACCTGCTCCGAGTCCTCCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp CCACATAGATTCGACCTGTTTCAGCATCATAGCGAATaGCACTGTCAGCAAGAGCCATGGCTGGTGTCATTG +
Preference number: 6 (lower is better)
Translates to: PHRFDLFQHHSE*HCQQEPWLVSL
Trigger: CAATGACACCAGCCATGGCTCTTGCTGACAGTGCCATTCGCTATGATGCTGAAACAGGTCGAATCTATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 72 bp TGTCTAGGCCCCTCCCCAGGAACTTTCCAGGTAACATaGGCACATACTCACTGTTGTCATTCTGTCCCAAAG +
Preference number: 6 (lower is better)
Translates to: CLGPSPGTFQVT*AHTHCCHSVPK
Trigger: CTTTGGGACAGAATGACAACAGTGAGTATGTGCCAATGTTACCTGGAAAGTTCCTGGGGAGGGGCCTAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 90 bp ACTCACTGTTGTCATTCTGTCCCAAAGGTGAGCTCCGAAAAGGGTTaGGTAGAGAGAAGTAGGAGCTCCAACTTTTGGAGGAAGAGCCAC +
Preference number: 6 (lower is better)
Translates to: THCCHSVPKVSSEKG*VERSRSSNFWRKSH
Trigger: GTGGCTCTTCCTCCAAAAGTTGGAGCTCCTACTTCTCTCTACCAAACCCTTTTCGGAGCTCACCTTTGGGACAGAATGACAACAGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 90 bp ATCCCCCATCTCCAGGCTTTGAGAATGATCCCTCACCTGAAGGCTTaGAAGCTGCATCTTTGGGGTCCCAGTTATAGGAGACTTCTTTGT +
Preference number: 6 (lower is better)
Translates to: IPHLQALRMIPHLKA*KLHLWGPSYRRLLC
Trigger: ACAAAGAAGTCTCCTATAACTGGGACCCCAAAGATGCAGCTTCAAAGCCTTCAGGTGAGGGATCATTCTCAAAGCCTGGAGATGGGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS TCA 72 bp CGGTTAGGTCTCTTAGCTTTATTCTTTGGGGGCTCATaGTCTGAAGGCTTTGAAGGTGATCCCCCATCTCCA +
Preference number: 6 (lower is better)
Translates to: RLGLLALFFGGS*SEGFEGDPPSP
Trigger: TGGAGATGGGGGATCACCTTCAAAGCCTTCAGATCATGAGCCCCCAAAGAATAAAGCTAAGAGACCTAACCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp AAGGGTTTGGTAGAGAGAAGTAGGAGCTCCAACTTTTaGAGGAAGAGCCACCCTGAGGATTTCTGGGGTTTT +
Preference number: 6 (lower is better)
Translates to: KGLVERSRSSNF*RKSHPEDFWGF
Trigger: AAAACCCCAGAAATCCTCAGGGTGGCTCTTCCTCCAAAAGTTGGAGCTCCTACTTCTCTCTACCAAACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp ATGATCCCTCACCTGAAGGCTTTGAAGCTGCATCTTTaGGGTCCCAGTTATAGGAGACTTCTTTGTCTAGGC +
Preference number: 6 (lower is better)
Translates to: MIPHLKALKLHL*GPSYRRLLCLG
Trigger: GCCTAGACAAAGAAGTCTCCTATAACTGGGACCCCAAAGATGCAGCTTCAAAGCCTTCAGGTGAGGGATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp GACCTCTTTTGGGAGAGTCGAACTGATTATCACGTCTaGCAAAATCCATTCTCACGTGAGTGTCGTCGTCGT +
Preference number: 6 (lower is better)
Translates to: DLFWESRTDYHV*QNPFSRECRRR
Trigger: ACGACGACGACACTCACGTGAGAATGGATTTTGCCAGACGTGATAATCAGTTCGACTCTCCCAAAAGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564206.2
CDS CAA 72 bp GCTGCACCTTCTGGGATCTCTGCATCTTTCACTTCTTaGGCTTCTTTGCATTCTTTCGTGGCTCCTCTGTCA +
Preference number: 6 (lower is better)
Translates to: AAPSGISASFTS*ASLHSFVAPLS
Trigger: TGACAGAGGAGCCACGAAAGAATGCAAAGAAGCCAAAGAAGTGAAAGATGCAGAGATCCCAGAAGGTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 72 bp GTGGGCTCACTCTGGGAAACATCATCATGTACCCTCTaGAATCTTCAAAAGGGGATCGAGAGTGGCGCTTTT +
Preference number: 6 (lower is better)
Translates to: VGSLWETSSCTL*NLQKGIESGAF
Trigger: AAAAGCGCCACTCTCGATCCCCTTTTGAAGATTCAAGAGGGTACATGATGATGTTTCCCAGAGTGAGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 72 bp TGTCATTCTGTCCCAAAGGTGAGCTCCGAAAAGGGTTaGGTAGAGAGAAGTAGGAGCTCCAACTTTTGGAGG +
Preference number: 6 (lower is better)
Translates to: CHSVPKVSSEKG*VERSRSSNFWR
Trigger: CCTCCAAAAGTTGGAGCTCCTACTTCTCTCTACCAAACCCTTTTCGGAGCTCACCTTTGGGACAGAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CAA 90 bp GGACCTCGAGCTGCACCTTCTGGGATCTCTGCATCTTTCACTTCTTaGGCTTCTTTGCATTCTTTCGTGGCTCCTCTGTCAACACAAAAA +
Preference number: 6 (lower is better)
Translates to: GPRAAPSGISASFTS*ASLHSFVAPLSTQK
Trigger: TTTTTGTGTTGACAGAGGAGCCACGAAAGAATGCAAAGAAGCCAAAGAAGTGAAAGATGCAGAGATCCCAGAAGGTGCAGCTCGAGGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS TCA 72 bp TGGGCTCACTCTGGGAAACATCATCATGTACCCTCTTaGATCTTCAAAAGGGGATCGAGAGTGGCGCTTTTT +
Preference number: 6 (lower is better)
Translates to: WAHSGKHHHVPS*IFKRGSRVALF
Trigger: AAAAAGCGCCACTCTCGATCCCCTTTTGAAGATTCAAGAGGGTACATGATGATGTTTCCCAGAGTGAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS TCA 72 bp GGTTCAGCAATTATGCCCCACGAATCTGGTAGTCCTTaGGTAGAGGGAGCTGGTGTATTGCTCTCTCTTTTA +
Preference number: 6 (lower is better)
Translates to: GSAIMPHESGSP*VEGAGVLLSLL
Trigger: TAAAAGAGAGAGCAATACACCAGCTCCCTCTACTCAAGGACTACCAGATTCGTGGGGCATAATTGCTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS TCA 72 bp GGCACTGTCAGCAAGAGCCATGGCTGGTGTCATTGCTaGGTTGAAAATTACTTCAATGTAGTCACCCTCTTC +
Preference number: 6 (lower is better)
Translates to: GTVSKSHGWCHC*VENYFNVVTLF
Trigger: GAAGAGGGTGACTACATTGAAGTAATTTTCAACTCAGCAATGACACCAGCCATGGCTCTTGCTGACAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp CTGCACCTTCTGGGATCTCTGCATCTTTCACTTCTTTaGCTTCTTTGCATTCTTTCGTGGCTCCTCTGTCAA +
Preference number: 6 (lower is better)
Translates to: LHLLGSLHLSLL*LLCILSWLLCQ
Trigger: TTGACAGAGGAGCCACGAAAGAATGCAAAGAAGCCAAAGAAGTGAAAGATGCAGAGATCCCAGAAGGTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2
CDS CCA 72 bp ACTCTCTTTTGGGAGAGTCGAACTGATTATCACGTCTaGCAAAATCCATTCTCACGTGAGTGTCGTCGTCGT +
Preference number: 6 (lower is better)
Translates to: TLFWESRTDYHV*QNPFSRECRRR
Trigger: ACGACGACGACACTCACGTGAGAATGGATTTTGCCAGACGTGATAATCAGTTCGACTCTCCCAAAAGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372129.4
CDS CAA 72 bp AGGAACTTTCCAGGTAACATTGGCACATACTCACTGTaGTCATTCTGTCCCAAAGGTGAGCTCCGAAAAGGG +
Preference number: 6 (lower is better)
Translates to: RNFPGNIGTYSL*SFCPKGELRKG
Trigger: CCCTTTTCGGAGCTCACCTTTGGGACAGAATGACAACAGTGAGTATGTGCCAATGTTACCTGGAAAGTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372129.4
ENST00000564206.2