RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IRGQ (Homo sapiens)

Ensembl gene IDs: ENSG00000167378

Ensembl transcript IDs: ENST00000422989.5, ENST00000422989.6, ENST00000598324.1, ENST00000601520.1, ENST00000602269.1

Found 239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCTTTACTGCCCTTCCACACCCAAAAGACCTCATTCCTGGTCCCTaGCTACTCCCAGAGCCCACCATGCCCAGACCTCTTACCCACCTC +
Preference number: 1 (lower is better)
Translates to: CFTALPHPKDLIPGP*LLPEPTMPRPLTHL
Trigger: GAGGTGGGTAAGAGGTCTGGGCATGGTGGGCTCTGGGAGTAGCCAGGGACCAGGAATGAGGTCTTTTGGGTGTGGAAGGGCAGTAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 90 bp CAAAAGACCTCATTCCTGGTCCCTGGCTACTCCCAGAGCCCACCATaGCCAGACCTCTTACCCACCTCACCTCATTTTTGTGGGACCACC +
Preference number: 1 (lower is better)
Translates to: QKTSFLVPGYSQSPP*PDLLPTSPHFCGTT
Trigger: GGTGGTCCCACAAAAATGAGGTGAGGTGGGTAAGAGGTCTGGGCATGGTGGGCTCTGGGAGTAGCCAGGGACCAGGAATGAGGTCTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 90 bp CTGCCTTTGCTTCATTCACTCCTGGCATATTCCCATGGTCTCAAGTaGCTGACCACCCATTTGGTGGGCCCCTGGCTCAATGCAGCACCC +
Preference number: 1 (lower is better)
Translates to: LPLLHSLLAYSHGLK*LTTHLVGPWLNAAP
Trigger: GGGTGCTGCATTGAGCCAGGGGCCCACCAAATGGGTGGTCAGGCACTTGAGACCATGGGAATATGCCAGGAGTGAATGAAGCAAAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 90 bp GCGCTCAGGTCTCCCTCCCCTATACTGGAGTTCAGGTCCCAGTCATaGACACCTCCCCACCAATTAGGAAACAGGACTTCTACCAGCCTC +
Preference number: 1 (lower is better)
Translates to: ALRSPSPILEFRSQS*TPPHQLGNRTSTSL
Trigger: GAGGCTGGTAGAAGTCCTGTTTCCTAATTGGTGGGGAGGTGTCCATGACTGGGACCTGAACTCCAGTATAGGGGAGGGAGACCTGAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 90 bp GAGAATAGGCAAGGGCCAGACCCACAGGGCCTTACTGTGTGCTGTTaGGCCTCAAGCCTGCCCTCTCTGGACTTTGCTCTTTCTGTCTAC +
Preference number: 1 (lower is better)
Translates to: ENRQGPDPQGLTVCC*ASSLPSLDFALSVY
Trigger: GTAGACAGAAAGAGCAAAGTCCAGAGAGGGCAGGCTTGAGGCCCAACAGCACACAGTAAGGCCCTGTGGGTCTGGCCCTTGCCTATTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR TCA 90 bp AGGGTGGTCAGGGAGGGGAAGTCCTCTCTGAGGGGATACGTGAGCTaGGATCTGACTGAGCCCGTCACAGGAAGGTTTGAGAGTAGAACA +
Preference number: 1 (lower is better)
Translates to: RVVREGKSSLRGYVS*DLTEPVTGRFESRT
Trigger: TGTTCTACTCTCAAACCTTCCTGTGACGGGCTCAGTCAGATCTCAGCTCACGTATCCCCTCAGAGAGGACTTCCCCTCCCTGACCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 90 bp GAAGTCTCCAGCTTTCTCGCACAAGCCCCCGATCCCTCCTCCAGATaGAGACCTCCCCTTACCCAATATTTAGGAACCAAGGTCCACAGC +
Preference number: 1 (lower is better)
Translates to: EVSSFLAQAPDPSSR*RPPLTQYLGTKVHS
Trigger: GCTGTGGACCTTGGTTCCTAAATATTGGGTAAGGGGAGGTCTGCATCTGGAGGAGGGATCGGGGGCTTGTGCGAGAAAGCTGGAGACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 90 bp TGGTCTCAAGTGCCTGACCACCCATTTGGTGGGCCCCTGGCTCAATaGAGCACCCTCTATGTACATCAGAAAGCAGAGCCTCTTGGGGAT +
Preference number: 1 (lower is better)
Translates to: WSQVPDHPFGGPLAQ*STLYVHQKAEPLGD
Trigger: ATCCCCAAGAGGCTCTGCTTTCTGATGTACATAGAGGGTGCTGCATTGAGCCAGGGGCCCACCAAATGGGTGGTCAGGCACTTGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 90 bp GGCCAGACCCACAGGGCCTTACTGTGTGCTGTTGGGCCTCAAGCCTaGCCTCTCTGGACTTTGCTCTTTCTGTCTACGACAAAAGGGATT +
Preference number: 1 (lower is better)
Translates to: GQTHRALLCAVGPQA*PLWTLLFLSTTKGI
Trigger: AATCCCTTTTGTCGTAGACAGAAAGAGCAAAGTCCAGAGAGGGCAGGCTTGAGGCCCAACAGCACACAGTAAGGCCCTGTGGGTCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 90 bp GTGAATGAGAATAGGCAAGGGCCAGACCCACAGGGCCTTACTGTGTaGTGTTGGGCCTCAAGCCTGCCCTCTCTGGACTTTGCTCTTTCT +
Preference number: 1 (lower is better)
Translates to: VNENRQGPDPQGLTV*CWASSLPSLDFALS
Trigger: AGAAAGAGCAAAGTCCAGAGAGGGCAGGCTTGAGGCCCAACAGCACACAGTAAGGCCCTGTGGGTCTGGCCCTTGCCTATTCTCATTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 90 bp TCCTTGAATTCCTGCCTTCAAGGGTCTTCCAGCCCTGTGGTGCCATaGAGACACACTTCAGTGGCGGCCAGTGATCTGTCTACAAGGGAG +
Preference number: 1 (lower is better)
Translates to: SLNSCLQGSSSPVVP*RHTSVAASDLSTRE
Trigger: CTCCCTTGTAGACAGATCACTGGCCGCCACTGAAGTGTGTCTGCATGGCACCACAGGGCTGGAAGACCCTTGAAGGCAGGAATTCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 90 bp CCACCAACTCCCTTCAGGACAGAAGGGTCTAGATGTCATTCACCATaGTTCCCAAAGGTATCAGGATTCCTGGCCAGGGGCGGTGGCTCA +
Preference number: 1 (lower is better)
Translates to: PPTPFRTEGSRCHSP*FPKVSGFLARGGGS
Trigger: TGAGCCACCGCCCCTGGCCAGGAATCCTGATACCTTTGGGAACCATGGTGAATGACATCTAGACCCTTCTGTCCTGAAGGGAGTTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 90 bp AAAGGCACCCAGACTAGAGCCATCTTGGTGCTGCCCAGGGGTGGGTaGCACTCATGTTTGAGCTCCATGTGTCAGGCTTTTCAGGAAAGG +
Preference number: 1 (lower is better)
Translates to: KGTQTRAILVLPRGG*HSCLSSMCQAFQER
Trigger: CCTTTCCTGAAAAGCCTGACACATGGAGCTCAAACATGAGTGCCACCCACCCCTGGGCAGCACCAAGATGGCTCTAGTCTGGGTGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 90 bp TTCTCTGGGTTGCAACTTGGTCTGGGATCAGCTGGGCAGTTCTTTTaGTGGTCTCAGCTGGGTTCAGCTGCCTATCAGCTAGGGAGCTCT +
Preference number: 1 (lower is better)
Translates to: FSGLQLGLGSAGQFF*WSQLGSAAYQLGSS
Trigger: AGAGCTCCCTAGCTGATAGGCAGCTGAACCCAGCTGAGACCAGCAAAAGAACTGCCCAGCTGATCCCAGACCAAGTTGCAACCCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 90 bp TATTCCCATGGTCTCAAGTGCCTGACCACCCATTTGGTGGGCCCCTaGCTCAATGCAGCACCCTCTATGTACATCAGAAAGCAGAGCCTC +
Preference number: 1 (lower is better)
Translates to: YSHGLKCLTTHLVGP*LNAAPSMYIRKQSL
Trigger: GAGGCTCTGCTTTCTGATGTACATAGAGGGTGCTGCATTGAGCCAGGGGCCCACCAAATGGGTGGTCAGGCACTTGAGACCATGGGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 90 bp TTCCCCACTGCAGTGGACACAAATCCCTCCATCATTATCCAGGCATaGATGGAACTCTGCTGTGGTGAGGAGGTTGTCTCGCCCACTCAC +
Preference number: 1 (lower is better)
Translates to: FPTAVDTNPSIIIQA*MELCCGEEVVSPTH
Trigger: GTGAGTGGGCGAGACAACCTCCTCACCACAGCAGAGTTCCATCCATGCCTGGATAATGATGGAGGGATTTGTGTCCACTGCAGTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 90 bp GCTGCCTATCAGCTAGGGAGCTCTGTTTCAGAGGTTGGTTGGCTATaGGTGGCAGGGATCAAGGATGACGGAGCCATGTGTCTCTTTTCC +
Preference number: 1 (lower is better)
Translates to: AAYQLGSSVSEVGWL*VAGIKDDGAMCLFS
Trigger: GGAAAAGAGACACATGGCTCCGTCATCCTTGATCCCTGCCACCCATAGCCAACCAACCTCTGAAACAGAGCTCCCTAGCTGATAGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR TCA 90 bp TTCCAGCCCTGTGGTGCCATGCAGACACACTTCAGTGGCGGCCAGTaGTCTGTCTACAAGGGAGTCTTAGTCTTTTCTGCTTGGATGCTC +
Preference number: 1 (lower is better)
Translates to: FQPCGAMQTHFSGGQ*SVYKGVLVFSAWML
Trigger: GAGCATCCAAGCAGAAAAGACTAAGACTCCCTTGTAGACAGATCACTGGCCGCCACTGAAGTGTGTCTGCATGGCACCACAGGGCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 90 bp TGCCGGGATCCCAATACAAGGTTTGGAGGAGCTGTCTCTGAGGTATaGTTTACTGCCCTTCCACACCCAAAAGACCTCATTCCTGGTCCC +
Preference number: 1 (lower is better)
Translates to: CRDPNTRFGGAVSEV*FTALPHPKDLIPGP
Trigger: GGGACCAGGAATGAGGTCTTTTGGGTGTGGAAGGGCAGTAAAGCATACCTCAGAGACAGCTCCTCCAAACCTTGTATTGGGATCCCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 90 bp CCACAGGCCAACCACACCCTTGATGTGTCCTTCATGGTTCCCCACTaGAGTGGACACAAATCCCTCCATCATTATCCAGGCATGGATGGA +
Preference number: 1 (lower is better)
Translates to: PQANHTLDVSFMVPH*SGHKSLHHYPGMDG
Trigger: TCCATCCATGCCTGGATAATGATGGAGGGATTTGTGTCCACTGCAGTGGGGAACCATGAAGGACACATCAAGGGTGTGGTTGGCCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 90 bp TTCAAGGGTCTTCCAGCCCTGTGGTGCCATGCAGACACACTTCAGTaGCGGCCAGTGATCTGTCTACAAGGGAGTCTTAGTCTTTTCTGC +
Preference number: 1 (lower is better)
Translates to: FKGLPALWCHADTLQ*RPVICLQGSLSLFC
Trigger: GCAGAAAAGACTAAGACTCCCTTGTAGACAGATCACTGGCCGCCACTGAAGTGTGTCTGCATGGCACCACAGGGCTGGAAGACCCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR TCA 90 bp AGGCAGTTGCCGGGATCCCAATACAAGGTTTGGAGGAGCTGTCTCTaGGGTATGCTTTACTGCCCTTCCACACCCAAAAGACCTCATTCC +
Preference number: 1 (lower is better)
Translates to: RQLPGSQYKVWRSCL*GMLYCPSTPKRPHS
Trigger: GGAATGAGGTCTTTTGGGTGTGGAAGGGCAGTAAAGCATACCTCAGAGACAGCTCCTCCAAACCTTGTATTGGGATCCCGGCAACTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 90 bp ATGAAGGCAGTCATATCCCTTCCCAGTCACACTCACAGAGGCAGTTaGCGGGATCCCAATACAAGGTTTGGAGGAGCTGTCTCTGAGGTA +
Preference number: 1 (lower is better)
Translates to: MKAVISLPSHTHRGS*RDPNTRFGGAVSEV
Trigger: TACCTCAGAGACAGCTCCTCCAAACCTTGTATTGGGATCCCGGCAACTGCCTCTGTGAGTGTGACTGGGAAGGGATATGACTGCCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 90 bp CAGTGGCGGCCAGTGATCTGTCTACAAGGGAGTCTTAGTCTTTTCTaGTTGGATGCTCCCAGGGACAGATGCCTGCCAACAACCTTATGT +
Preference number: 1 (lower is better)
Translates to: QWRPVICLQGSLSLF*LDAPRDRCLPTTLC
Trigger: ACATAAGGTTGTTGGCAGGCATCTGTCCCTGGGAGCATCCAAGCAGAAAAGACTAAGACTCCCTTGTAGACAGATCACTGGCCGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 90 bp GTGGACACAAATCCCTCCATCATTATCCAGGCATGGATGGAACTCTaGTGTGGTGAGGAGGTTGTCTCGCCCACTCACCCAAGTTTTCCA +
Preference number: 1 (lower is better)
Translates to: VDTNPSIIIQAWMEL*CGEEVVSPTHPSFP
Trigger: TGGAAAACTTGGGTGAGTGGGCGAGACAACCTCCTCACCACAGCAGAGTTCCATCCATGCCTGGATAATGATGGAGGGATTTGTGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 90 bp GAGCCCACCATGCCCAGACCTCTTACCCACCTCACCTCATTTTTGTaGGACCACCCTCCCTACATGCTTTTGGAGGGCAATTATAGAAAC +
Preference number: 1 (lower is better)
Translates to: EPTMPRPLTHLTSFL*DHPPYMLLEGNYRN
Trigger: GTTTCTATAATTGCCCTCCAAAAGCATGTAGGGAGGGTGGTCCCACAAAAATGAGGTGAGGTGGGTAAGAGGTCTGGGCATGGTGGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 90 bp GGCTCAATGCAGCACCCTCTATGTACATCAGAAAGCAGAGCCTCTTaGGGATACCCGAGGTGTCCATACAGAAGTGTTTGGACCAGTGCA +
Preference number: 1 (lower is better)
Translates to: GSMQHPLCTSESRAS*GYPRCPYRSVWTSA
Trigger: TGCACTGGTCCAAACACTTCTGTATGGACACCTCGGGTATCCCCAAGAGGCTCTGCTTTCTGATGTACATAGAGGGTGCTGCATTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 90 bp CACAGGGCCTTACTGTGTGCTGTTGGGCCTCAAGCCTGCCCTCTCTaGACTTTGCTCTTTCTGTCTACGACAAAAGGGATTCTATCGCTT +
Preference number: 1 (lower is better)
Translates to: HRALLCAVGPQACPL*TLLFLSTTKGILSL
Trigger: AAGCGATAGAATCCCTTTTGTCGTAGACAGAAAGAGCAAAGTCCAGAGAGGGCAGGCTTGAGGCCCAACAGCACACAGTAAGGCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 90 bp TCCAAAGAGCACCACAGGCCAACCACACCCTTGATGTGTCCTTCATaGTTCCCCACTGCAGTGGACACAAATCCCTCCATCATTATCCAG +
Preference number: 1 (lower is better)
Translates to: SKEHHRPTTPLMCPS*FPTAVDTNPSIIIQ
Trigger: CTGGATAATGATGGAGGGATTTGTGTCCACTGCAGTGGGGAACCATGAAGGACACATCAAGGGTGTGGTTGGCCTGTGGTGCTCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR TCA 90 bp AAATCCCTCCATCATTATCCAGGCATGGATGGAACTCTGCTGTGGTaGGGAGGTTGTCTCGCCCACTCACCCAAGTTTTCCATGCCTGTT +
Preference number: 1 (lower is better)
Translates to: KSLHHYPGMDGTLLW*GGCLAHSPKFSMPV
Trigger: AACAGGCATGGAAAACTTGGGTGAGTGGGCGAGACAACCTCCTCACCACAGCAGAGTTCCATCCATGCCTGGATAATGATGGAGGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 90 bp ATAGCAGTGATGTCAGACAGGACCAAATCAGAGACAGGGTCAAAGTaGCAGAAAAATGAGGAGCACACTCCGAGCAAAGGCATGGGGGTG +
Preference number: 1 (lower is better)
Translates to: IAVMSDRTKSETGSK*QKNEEHTPSKGMGV
Trigger: CACCCCCATGCCTTTGCTCGGAGTGTGCTCCTCATTTTTCTGCCACTTTGACCCTGTCTCTGATTTGGTCCTGTCTGACATCACTGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 90 bp CCACATGTGGCTAGCAGCCTAGAACATTCCAGGCACTGTGGTTTCTaGCTTTGCTTCATTCACTCCTGGCATATTCCCATGGTCTCAAGT +
Preference number: 1 (lower is better)
Translates to: PHVASSLEHSRHCGF*LCFIHSWHIPMVSS
Trigger: ACTTGAGACCATGGGAATATGCCAGGAGTGAATGAAGCAAAGGCAGAAACCACAGTGCCTGGAATGTTCTAGGCTGCTAGCCACATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 90 bp ATTTACGAAGCACCTATTGTGTCAGGCACCTATTGTTCTAGATGCTaGGGAAACAACAGAGAACAGGACAGGCAACGGGTCAAAAGCCAA +
Preference number: 1 (lower is better)
Translates to: IYEAPIVSGTYCSRC*GNNREQDRQRVKSQ
Trigger: TTGGCTTTTGACCCGTTGCCTGTCCTGTTCTCTGTTGTTTCCCCAGCATCTAGAACAATAGGTGCCTGACACAATAGGTGCTTCGTAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR TCA 90 bp TGTTCTGCTTTTGATGGCAATGCCAAAATTCATCATACATTTCCTTaGATTCCTGCCTTCAAGGGTCTTCCAGCCCTGTGGTGCCATGCA +
Preference number: 1 (lower is better)
Translates to: CSAFDGNAKIHHTFP*IPAFKGLPALWCHA
Trigger: TGCATGGCACCACAGGGCTGGAAGACCCTTGAAGGCAGGAATTCAAGGAAATGTATGATGAATTTTGGCATTGCCATCAAAAGCAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 90 bp AATATTTACGAAGCACCTATTGTGTCAGGCACCTATTGTTCTAGATaGTGGGGAAACAACAGAGAACAGGACAGGCAACGGGTCAAAAGC +
Preference number: 1 (lower is better)
Translates to: NIYEAPIVSGTYCSR*WGNNREQDRQRVKS
Trigger: GCTTTTGACCCGTTGCCTGTCCTGTTCTCTGTTGTTTCCCCAGCATCTAGAACAATAGGTGCCTGACACAATAGGTGCTTCGTAAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 90 bp GGAGTCTTAGTCTTTTCTGCTTGGATGCTCCCAGGGACAGATGCCTaGCAACAACCTTATGTCTTCACAAAGACTAAAATGGAATCCCAT +
Preference number: 1 (lower is better)
Translates to: GVLVFSAWMLPGTDA*QQPYVFTKTKMESH
Trigger: ATGGGATTCCATTTTAGTCTTTGTGAAGACATAAGGTTGTTGGCAGGCATCTGTCCCTGGGAGCATCCAAGCAGAAAAGACTAAGACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR TCA 90 bp AAAGATATGGATGAATATTCTTCCCCAAAGCTGAAAGAGCTTTCATaGAAATGCCTGGAGCCATTCAGTATAGAACTAAGTGCTCTTCCC +
Preference number: 1 (lower is better)
Translates to: KDMDEYSSPKLKELS*KCLEPFSIELSALP
Trigger: GGGAAGAGCACTTAGTTCTATACTGAATGGCTCCAGGCATTTTCATGAAAGCTCTTTCAGCTTTGGGGAAGAATATTCATCCATATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR GCA 90 bp AGAGAACAGCAGGTGCATGGGTCCCCAGGCAGGACTCAAGGTAGCCACTCAGGCGTTGGGCCTCAAGCCTaGCCTCTCTGGACTTTGCTC +
Preference number: 2 (lower is better)
Translates to: REQQVHGSPGRTQGSHSGVGPQA*PLWTLL
Trigger: GAGCAAAGTCCAGAGAGGGCAGGCTTGAGGCCCAAC...GCCTGAGTGGCTACCTTGAGTCCTGCCTGGGGACCCATGCACCTGCTGTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR CCA 90 bp GGCCTTACTGTGTGCTGTTGGGCCTCAAGCCTGCCCTCTCTGGACTTTGCTCTTCTCATTCCTGGTCCCTaGCTACTCCCAGAGCCCACC +
Preference number: 2 (lower is better)
Translates to: GLTVCCWASSLPSLDFALLIPGP*LLPEPT
Trigger: GGTGGGCTCTGGGAGTAGCCAGGGACCAGGAATGAG...AAGAGCAAAGTCCAGAGAGGGCAGGCTTGAGGCCCAACAGCACACAGTAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR GCA 90 bp AGGAGAGCAACAATCCAAGGGCATGGCTACAGAAAGGCTGGCCCAGTTGGGGTCCAGGGCCTTACTGTGTaGTGTTGGGCCTCAAGCCTG +
Preference number: 2 (lower is better)
Translates to: RRATIQGHGYRKAGPVGVQGLTV*CWASSL
Trigger: CAGGCTTGAGGCCCAACAGCACACAGTAAGGCCCTG...GACCCCAACTGGGCCAGCCTTTCTGTAGCCATGCCCTTGGATTGTTGCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR TCA 90 bp AGGAGAGCAACAATCCAAGGGCATGGCTACAGAAAGGCTGGCCCAGTTGGGGTCGGCAGGAGAATCACTTaGACCTGGAAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: RRATIQGHGYRKAGPVGVGRRIT*TWKVEV
Trigger: AACCTCCACCTTCCAGGTTCAAGTGATTCTCCTGCC...GACCCCAACTGGGCCAGCCTTTCTGTAGCCATGCCCTTGGATTGTTGCTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR CCA 90 bp GATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCCTTCAAGCTCCCCTGTCAGAGTCTaGACTCCCAAGCCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: DKKSHIPAGSQESTSPSSSPVRV*TPKPPP
Trigger: GGGAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGA...GCTTGAAGGGGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422989.5
ENST00000602269.1
3UTR-3UTR CCA 90 bp GGGCGCTCAGGTCTCCCTCCCCTATACTGGAGTTCAGGTCCCAGTCATGGACACTTCTACCAGCCTCCCTaGAGGACTAAACATCCAGTA +
Preference number: 2 (lower is better)
Translates to: GRSGLPPLYWSSGPSHGHFYQPP*RTKHPV
Trigger: TACTGGATGTTTAGTCCTCCAGGGAGGCTGGTAGAA...GTGTCCATGACTGGGACCTGAACTCCAGTATAGGGGAGGGAGACCTGAGCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR CCA 90 bp GGCCTTACTGTGTGCTGTTGGGCCTCAAGCCTGCCCTCTCTGGACTTTGCTCTTCTCCCTCCCCTATACTaGAGTTCAGGTCCCAGTCAT +
Preference number: 2 (lower is better)
Translates to: GLTVCCWASSLPSLDFALLPPLY*SSGPSH
Trigger: ATGACTGGGACCTGAACTCCAGTATAGGGGAGGGAG...AAGAGCAAAGTCCAGAGAGGGCAGGCTTGAGGCCCAACAGCACACAGTAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CAA 90 bp CCAGTCACACTCACAGAGGCAGTTGCCGGGATCCCAATACAAGGTTaGGAGGAGCTGTCTCTGAGGTATGCTTTACTGCCCTTCCACACC +
Preference number: 2 (lower is better)
Translates to: PVTLTEAVAGIPIQG*EELSLRYALLPFHT
Trigger: GGTGTGGAAGGGCAGTAAAGCATACCTCAGAGACAGCTCCTCCAAACCTTGTATTGGGATCCCGGCAACTGCCTCTGTGAGTGTGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CAA 90 bp ATTCTCTGGGTTGCAACTTGGTCTGGGATCAGCTGGGCAGTTCTTTaGCTGGTCTCAGCTGGGTTCAGCTGCCTATCAGCTAGGGAGCTC +
Preference number: 2 (lower is better)
Translates to: ILWVATWSGISWAVL*LVSAGFSCLSAREL
Trigger: GAGCTCCCTAGCTGATAGGCAGCTGAACCCAGCTGAGACCAGCAAAAGAACTGCCCAGCTGATCCCAGACCAAGTTGCAACCCAGAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR CCA 90 bp GACTCTCTGAATCCAGGTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCCCTGTCAGAGTCTaGACTCCCAAGCCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: DSLNPGDKKSHIPAGSQESPVRV*TPKPPP
Trigger: GGGAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGA...CTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCACCTGGATTCAGAGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422989.5
ENST00000602269.1
3UTR-3UTR CCA 90 bp AAGACCCCCGTCTCTACAGAAAATTTGGTGCTGTGTACCTATAGTCCCAGCTACAGAGTTCCAGCTCCCTaGGGCGCTCAGGTCTCCCTC +
Preference number: 2 (lower is better)
Translates to: KTPVSTENLVLCTYSPSYRVPAP*GAQVSL
Trigger: GAGGGAGACCTGAGCGCCCCAGGGAGCTGGAACTCT...GTAGCTGGGACTATAGGTACACAGCACCAAATTTTCTGTAGAGACGGGGGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CAA 90 bp CCAGAGCCCACCATGCCCAGACCTCTTACCCACCTCACCTCATTTTaGTGGGACCACCCTCCCTACATGCTTTTGGAGGGCAATTATAGA +
Preference number: 2 (lower is better)
Translates to: PEPTMPRPLTHLTSF*WDHPPYMLLEGNYR
Trigger: TCTATAATTGCCCTCCAAAAGCATGTAGGGAGGGTGGTCCCACAAAAATGAGGTGAGGTGGGTAAGAGGTCTGGGCATGGTGGGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CAA 90 bp GGAGAGCAACAATCCAAGGGCATGGCTACAGAAAGGCTGGCCCAGTaGGGGTCATTAATGGGTATACCTGGCTCCAGAACTAAGGCGCTT +
Preference number: 2 (lower is better)
Translates to: GEQQSKGMATERLAQ*GSLMGIPGSRTKAL
Trigger: AAGCGCCTTAGTTCTGGAGCCAGGTATACCCATTAATGACCCCAACTGGGCCAGCCTTTCTGTAGCCATGCCCTTGGATTGTTGCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR TCA 90 bp TCTTGCTTTCTCAGATATGATCTCTGGCATGACTCCTGCTGGCATGAGGGCAGAGGCAGGAGAATCACATaGACCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: SCFLRYDLWHDSCWHEGRGRRIT*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCATGTGATTCTCCTGCC...TCTGCCCTCATGCCAGCAGGAGTCATGCCAGAGATCATATCTGAGAAAGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR TCA 90 bp TCAGCTGGGTTCAGCTGCCTATCAGCTAGGGAGCTCTGTTTCAGAGGTTGGTTGGGTGGCACTCATGTTTaGGCTCCATGTGTCAGGCTT +
Preference number: 2 (lower is better)
Translates to: SAGFSCLSARELCFRGWLGGTHV*APCVRL
Trigger: AAGCCTGACACATGGAGCTCAAACATGAGTGCCACC...CAACCAACCTCTGAAACAGAGCTCCCTAGCTGATAGGCAGCTGAACCCAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR GCA 90 bp TTCACTCCTGGCATATTCCCATGGTCTCAAGTGCCTGACCACCCATTTGGTGGGACTCACAGAGGCAGTTaGCGGGATCCCAATACAAGG +
Preference number: 2 (lower is better)
Translates to: FTPGIFPWSQVPDHPFGGTHRGS*RDPNTR
Trigger: CCTTGTATTGGGATCCCGGCAACTGCCTCTGTGAGT...CCCACCAAATGGGTGGTCAGGCACTTGAGACCATGGGAATATGCCAGGAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR CCA 90 bp TCTCTGAGGTATGCTTTACTGCCCTTCCACACCCAAAAGACCTCATTCCTGGTCGTCCCTGCTAGAGTCTaGGCCACCAACTCCCTTCAG +
Preference number: 2 (lower is better)
Translates to: SLRYALLPFHTQKTSFLVVPARV*ATNSLQ
Trigger: CTGAAGGGAGTTGGTGGCCCAGACTCTAGCAGGGAC...GACCAGGAATGAGGTCTTTTGGGTGTGGAAGGGCAGTAAAGCATACCTCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CAA 90 bp TGGCTCAATGCAGCACCCTCTATGTACATCAGAAAGCAGAGCCTCTaGGGGATACCCGAGGTGTCCATACAGAAGTGTTTGGACCAGTGC +
Preference number: 2 (lower is better)
Translates to: WLNAAPSMYIRKQSL*GIPEVSIQKCLDQC
Trigger: GCACTGGTCCAAACACTTCTGTATGGACACCTCGGGTATCCCCAAGAGGCTCTGCTTTCTGATGTACATAGAGGGTGCTGCATTGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR TCA 90 bp TTCACTCCTGGCATATTCCCATGGTCTCAAGTGCCTGACCACCCATTTGGTGGGTCCCCAGAGATCACCTaGATTGCTCAGCACCTAGAA +
Preference number: 2 (lower is better)
Translates to: FTPGIFPWSQVPDHPFGGSPEIT*IAQHLE
Trigger: TTCTAGGTGCTGAGCAATTCAGGTGATCTCTGGGGA...CCCACCAAATGGGTGGTCAGGCACTTGAGACCATGGGAATATGCCAGGAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR TCA 90 bp AGGAGAGCAACAATCCAAGGGCATGGCTACAGAAAGGCTGGCCCAGTTGGGGTCCTGAAAGAGCTTTCATaGAAATGCCTGGAGCCATTC +
Preference number: 2 (lower is better)
Translates to: RRATIQGHGYRKAGPVGVLKELS*KCLEPF
Trigger: GAATGGCTCCAGGCATTTTCATGAAAGCTCTTTCAG...GACCCCAACTGGGCCAGCCTTTCTGTAGCCATGCCCTTGGATTGTTGCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR CCA 90 bp AAGACCCCCGTCTCTACAGAAAATTTGGTGCTGTGTACCTATAGTCCCAGCTACGTAATCCTAGCACTTTaGGAGGCCGGAGCGGGTCGA +
Preference number: 2 (lower is better)
Translates to: KTPVSTENLVLCTYSPSYVILAL*EAGAGR
Trigger: TCGACCCGCTCCGGCCTCCCAAAGTGCTAGGATTAC...GTAGCTGGGACTATAGGTACACAGCACCAAATTTTCTGTAGAGACGGGGGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR CCA 90 bp TCAGCTGGGTTCAGCTGCCTATCAGCTAGGGAGCTCTGTTTCAGAGGTTGGTTGACTTGCCCAAGTCAGTaGAAGGACTATCTGCCCCTA +
Preference number: 2 (lower is better)
Translates to: SAGFSCLSARELCFRGWLTCPSQ*KDYLPL
Trigger: TAGGGGCAGATAGTCCTTCCACTGACTTGGGCAAGT...CAACCAACCTCTGAAACAGAGCTCCCTAGCTGATAGGCAGCTGAACCCAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CAA 90 bp ACCCACCTCACCTCATTTTTGTGGGACCACCCTCCCTACATGCTTTaGGAGGGCAATTATAGAAACCCATCCACTCCCCAGGAGAGATCA +
Preference number: 2 (lower is better)
Translates to: THLTSFLWDHPPYML*EGNYRNPSTPQERS
Trigger: TGATCTCTCCTGGGGAGTGGATGGGTTTCTATAATTGCCCTCCAAAAGCATGTAGGGAGGGTGGTCCCACAAAAATGAGGTGAGGTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CAA 90 bp GCCTTACTGTGTGCTGTTGGGCCTCAAGCCTGCCCTCTCTGGACTTaGCTCTTTCTGTCTACGACAAAAGGGATTCTATCGCTTGGATTC +
Preference number: 2 (lower is better)
Translates to: ALLCAVGPQACPLWT*LFLSTTKGILSLGF
Trigger: GAATCCAAGCGATAGAATCCCTTTTGTCGTAGACAGAAAGAGCAAAGTCCAGAGAGGGCAGGCTTGAGGCCCAACAGCACACAGTAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CAA 90 bp TCACAGGAAGGTTTGAGAGTAGAACAGGAAGTTGTGAGTAGAGCCTaGAAGGAAAGAGAACAGCAGGTGCATGGGTCCCCAGGCAGGACT +
Preference number: 2 (lower is better)
Translates to: SQEGLRVEQEVVSRA*KEREQQVHGSPGRT
Trigger: AGTCCTGCCTGGGGACCCATGCACCTGCTGTTCTCTTTCCTTCAAGGCTCTACTCACAACTTCCTGTTCTACTCTCAAACCTTCCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CAA 90 bp TGGCGGCCAGTGATCTGTCTACAAGGGAGTCTTAGTCTTTTCTGCTaGGATGCTCCCAGGGACAGATGCCTGCCAACAACCTTATGTCTT +
Preference number: 2 (lower is better)
Translates to: WRPVICLQGSLSLFC*DAPRDRCLPTTLCL
Trigger: AAGACATAAGGTTGTTGGCAGGCATCTGTCCCTGGGAGCATCCAAGCAGAAAAGACTAAGACTCCCTTGTAGACAGATCACTGGCCGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CAA 90 bp CCATCATTATCCAGGCATGGATGGAACTCTGCTGTGGTGAGGAGGTaGTCTCGCCCACTCACCCAAGTTTTCCATGCCTGTTCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: PSLSRHGWNSAVVRR*SRPLTQVFHACSAF
Trigger: AAAAGCAGAACAGGCATGGAAAACTTGGGTGAGTGGGCGAGACAACCTCCTCACCACAGCAGAGTTCCATCCATGCCTGGATAATGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR GCA 90 bp AAGACCCCCGTCTCTACAGAAAATTTGGTGCTGTGTACCTATAGTCCCAGCTACCCTTGGGGACCTGTGTaGAGGCTTTTTCTCCCAGAG +
Preference number: 2 (lower is better)
Translates to: KTPVSTENLVLCTYSPSYPWGPV*RLFLPE
Trigger: CTCTGGGAGAAAAAGCCTGCACACAGGTCCCCAAGG...GTAGCTGGGACTATAGGTACACAGCACCAAATTTTCTGTAGAGACGGGGGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR GCA 90 bp TCTCTGAGGTATGCTTTACTGCCCTTCCACACCCAAAAGACCTCATTCCTGGTCAGATTCAAAGCCCACTaGTCCTTGGGGACCTGTGTG +
Preference number: 2 (lower is better)
Translates to: SLRYALLPFHTQKTSFLVRFKAH*SLGTCV
Trigger: CACACAGGTCCCCAAGGAGCAGTGGGCTTTGAATCT...GACCAGGAATGAGGTCTTTTGGGTGTGGAAGGGCAGTAAAGCATACCTCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR GCA 90 bp TTCACTCCTGGCATATTCCCATGGTCTCAAGTGCCTGACCACCCATTTGGTGGGAAGTGTTTGGACCAGTaGAGCAGTACAGCTGCTCTT +
Preference number: 2 (lower is better)
Translates to: FTPGIFPWSQVPDHPFGGKCLDQ*SSTAAL
Trigger: AAGAGCAGCTGTACTGCTGCACTGGTCCAAACACTT...CCCACCAAATGGGTGGTCAGGCACTTGAGACCATGGGAATATGCCAGGAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR GCA 90 bp AAGACCCCCGTCTCTACAGAAAATTTGGTGCTGTGTACCTATAGTCCCAGCTACGGGCCCCTGGCTCAATaGAGCACCCTCTATGTACAT +
Preference number: 2 (lower is better)
Translates to: KTPVSTENLVLCTYSPSYGPLAQ*STLYVH
Trigger: ATGTACATAGAGGGTGCTGCATTGAGCCAGGGGCCC...GTAGCTGGGACTATAGGTACACAGCACCAAATTTTCTGTAGAGACGGGGGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR GCA 90 bp TCTTGCTTTCTCAGATATGATCTCTGGCATGACTCCTGCTGGCATGAGGGCAGATCCCATGGTCTCAAGTaGCTGACCACCCATTTGGTG +
Preference number: 2 (lower is better)
Translates to: SCFLRYDLWHDSCWHEGRSHGLK*LTTHLV
Trigger: CACCAAATGGGTGGTCAGGCACTTGAGACCATGGGA...TCTGCCCTCATGCCAGCAGGAGTCATGCCAGAGATCATATCTGAGAAAGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR CCA 90 bp AGGAGAGCAACAATCCAAGGGCATGGCTACAGAAAGGCTGGCCCAGTTGGGGTCAGGGATTCTATCGCTTaGATTCTCAGATCCTCCTTT +
Preference number: 2 (lower is better)
Translates to: RRATIQGHGYRKAGPVGVRDSIA*ILRSSF
Trigger: AAAGGAGGATCTGAGAATCCAAGCGATAGAATCCCT...GACCCCAACTGGGCCAGCCTTTCTGTAGCCATGCCCTTGGATTGTTGCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CAA 90 bp GTGGGAGTCCAAGCTGGAGATGATGGTACCATCCCTTGTCTGCCCTaGGATCAGTTACCTTTGTCTTCAGCTTTTAAGGGAGACAGGATC +
Preference number: 2 (lower is better)
Translates to: VGVQAGDDGTIPCLP*DQLPLSSAFKGDRI
Trigger: GATCCTGTCTCCCTTAAAAGCTGAAGACAAAGGTAACTGATCCAAGGGCAGACAAGGGATGGTACCATCATCTCCAGCTTGGACTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CAA 90 bp GTGCTCTTCCCCATGGTAGCTATCTCAACTTTGAAGGGACAAATTTaGTCAGCAGTGGGAGTCCAAGCTGGAGATGATGGTACCATCCCT +
Preference number: 2 (lower is better)
Translates to: VLFPMVAISTLKGQI*SAVGVQAGDDGTIP
Trigger: AGGGATGGTACCATCATCTCCAGCTTGGACTCCCACTGCTGACAAAATTTGTCCCTTCAAAGTTGAGATAGCTACCATGGGGAAGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR GCA 90 bp AGGAGAGCAACAATCCAAGGGCATGGCTACAGAAAGGCTGGCCCAGTTGGGGTCGATGACATGTTGAAATaGTATTTTGGATACATTGGG +
Preference number: 2 (lower is better)
Translates to: RRATIQGHGYRKAGPVGVDDMLK*YFGYIG
Trigger: CCCAATGTATCCAAAATAGCATTTCAACATGTCATC...GACCCCAACTGGGCCAGCCTTTCTGTAGCCATGCCCTTGGATTGTTGCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CAA 90 bp GGAGATGATGGTACCATCCCTTGTCTGCCCTTGGATCAGTTACCTTaGTCTTCAGCTTTTAAGGGAGACAGGATCTCAAAACTAAGGTTC +
Preference number: 2 (lower is better)
Translates to: GDDGTIPCLPLDQLP*SSAFKGDRISKLRF
Trigger: GAACCTTAGTTTTGAGATCCTGTCTCCCTTAAAAGCTGAAGACAAAGGTAACTGATCCAAGGGCAGACAAGGGATGGTACCATCATCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CAA 90 bp TTTAGAACAATCACCTATTTAGTTAATGATTCTCTGGGTTGCAACTaGGTCTGGGATCAGCTGGGCAGTTCTTTTGCTGGTCTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: FRTITYLVNDSLGCN*VWDQLGSSFAGLSW
Trigger: CCAGCTGAGACCAGCAAAAGAACTGCCCAGCTGATCCCAGACCAAGTTGCAACCCAGAGAATCATTAACTAAATAGGTGATTGTTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR CCA 90 bp ATTATTCACATCTCTGTTTTCAGGAGACATCAGAGGCTCAGAAGGCTGTCACATGCACTCCTTCCAGGGTaGAAAAACTCAGATACTGAT +
Preference number: 2 (lower is better)
Translates to: IIHISVFRRHQRLRRLSHALLPG*KNSDTD
Trigger: ATCAGTATCTGAGTTTTTCCACCCTGGAAGGAGTGC...ATGTGACAGCCTTCTGAGCCTCTGATGTCTCCTGAAAACAGAGATGTGAATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 72 bp GCCCTTCCACACCCAAAAGACCTCATTCCTGGTCCCTaGCTACTCCCAGAGCCCACCATGCCCAGACCTCTT +
Preference number: 3 (lower is better)
Translates to: ALPHPKDLIPGP*LLPEPTMPRPL
Trigger: AAGAGGTCTGGGCATGGTGGGCTCTGGGAGTAGCCAGGGACCAGGAATGAGGTCTTTTGGGTGTGGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR CAA 90 bp AGTGACAGTGGCAAAGTCGTGCTTGCTTCCCAGGTCCCTGACCTCAGACAAGGGTGCCTGACCACCCATTaGGTGGGCCCCTGGCTCAAT +
Preference number: 3 (lower is better)
Translates to: SDSGKVVLASQVPDLRQGCLTTH*VGPWLN
Trigger: ATTGAGCCAGGGGCCCACCAAATGGGTGGTCAGGCA...CCCTTGTCTGAGGTCAGGGACCTGGGAAGCAAGCACGACTTTGCCACTGTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 72 bp AATAGGCAAGGGCCAGACCCACAGGGCCTTACTGTGTaGTGTTGGGCCTCAAGCCTGCCCTCTCTGGACTTT +
Preference number: 3 (lower is better)
Translates to: NRQGPDPQGLTV*CWASSLPSLDF
Trigger: AAAGTCCAGAGAGGGCAGGCTTGAGGCCCAACAGCACACAGTAAGGCCCTGTGGGTCTGGCCCTTGCCTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 72 bp TCCTGCCTTCAAGGGTCTTCCAGCCCTGTGGTGCCATaGAGACACACTTCAGTGGCGGCCAGTGATCTGTCT +
Preference number: 3 (lower is better)
Translates to: SCLQGSSSPVVP*RHTSVAASDLS
Trigger: AGACAGATCACTGGCCGCCACTGAAGTGTGTCTGCATGGCACCACAGGGCTGGAAGACCCTTGAAGGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR CAA 90 bp GGCCTTACTGTGTGCTGTTGGGCCTCAAGCCTGCCCTCTCTGGACTTTGCTCTTCACCTCACCTCATTTTaGTGGGACCACCCTCCCTAC +
Preference number: 3 (lower is better)
Translates to: GLTVCCWASSLPSLDFALHLTSF*WDHPPY
Trigger: GTAGGGAGGGTGGTCCCACAAAAATGAGGTGAGGTG...AAGAGCAAAGTCCAGAGAGGGCAGGCTTGAGGCCCAACAGCACACAGTAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 72 bp GCCTATCAGCTAGGGAGCTCTGTTTCAGAGGTTGGTTaGCTATGGGTGGCAGGGATCAAGGATGACGGAGCC +
Preference number: 3 (lower is better)
Translates to: AYQLGSSVSEVG*LWVAGIKDDGA
Trigger: GGCTCCGTCATCCTTGATCCCTGCCACCCATAGCCAACCAACCTCTGAAACAGAGCTCCCTAGCTGATAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR CAA 90 bp AGAGAACAGCAGGTGCATGGGTCCCCAGGCAGGACTCAAGGTAGCCACTCAGGCTCCATACAGAAGTGTTaGGACCAGTGCAGCAGTACA +
Preference number: 3 (lower is better)
Translates to: REQQVHGSPGRTQGSHSGSIQKC*DQCSST
Trigger: TGTACTGCTGCACTGGTCCAAACACTTCTGTATGGA...GCCTGAGTGGCTACCTTGAGTCCTGCCTGGGGACCCATGCACCTGCTGTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR-3UTR CAA 90 bp TTCACTCCTGGCATATTCCCATGGTCTCAAGTGCCTGACCACCCATTTGGTGGGAGAAAGCAGAGCCTCTaGGGGATACCCGAGGTGTCC +
Preference number: 3 (lower is better)
Translates to: FTPGIFPWSQVPDHPFGGRKQSL*GIPEVS
Trigger: GGACACCTCGGGTATCCCCAAGAGGCTCTGCTTTCT...CCCACCAAATGGGTGGTCAGGCACTTGAGACCATGGGAATATGCCAGGAGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR TCA 72 bp ATTCACTCCTGGCATATTCCCATGGTCTCAAGTGCCTaGCCACCCATTTGGTGGGCCCCTGGCTCAATGCAG +
Preference number: 3 (lower is better)
Translates to: IHSWHIPMVSSA*PPIWWAPGSMQ
Trigger: CTGCATTGAGCCAGGGGCCCACCAAATGGGTGGTCAGGCACTTGAGACCATGGGAATATGCCAGGAGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 72 bp TCATTCCTGGTCCCTGGCTACTCCCAGAGCCCACCATaGCCAGACCTCTTACCCACCTCACCTCATTTTTGT +
Preference number: 3 (lower is better)
Translates to: SFLVPGYSQSPP*PDLLPTSPHFC
Trigger: ACAAAAATGAGGTGAGGTGGGTAAGAGGTCTGGGCATGGTGGGCTCTGGGAGTAGCCAGGGACCAGGAATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 72 bp CCGCCACCCCATCAAGATTCAAAGCCCACTGCTCCTTaGGGACCTGTGTGCAGGCTTTTTCTCCCAGAGAAA +
Preference number: 3 (lower is better)
Translates to: PPPHQDSKPTAP*GPVCRLFLPEK
Trigger: TTTCTCTGGGAGAAAAAGCCTGCACACAGGTCCCCAAGGAGCAGTGGGCTTTGAATCTTGATGGGGTGGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 72 bp GGTCTCAAGTGCCTGACCACCCATTTGGTGGGCCCCTaGCTCAATGCAGCACCCTCTATGTACATCAGAAAG +
Preference number: 3 (lower is better)
Translates to: GLKCLTTHLVGP*LNAAPSMYIRK
Trigger: CTTTCTGATGTACATAGAGGGTGCTGCATTGAGCCAGGGGCCCACCAAATGGGTGGTCAGGCACTTGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 72 bp CAGACTAGAGCCATCTTGGTGCTGCCCAGGGGTGGGTaGCACTCATGTTTGAGCTCCATGTGTCAGGCTTTT +
Preference number: 3 (lower is better)
Translates to: QTRAILVLPRGG*HSCLSSMCQAF
Trigger: AAAAGCCTGACACATGGAGCTCAAACATGAGTGCCACCCACCCCTGGGCAGCACCAAGATGGCTCTAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 72 bp CTTCCAGCCCTGTGGTGCCATGCAGACACACTTCAGTaGCGGCCAGTGATCTGTCTACAAGGGAGTCTTAGT +
Preference number: 3 (lower is better)
Translates to: LPALWCHADTLQ*RPVICLQGSLS
Trigger: ACTAAGACTCCCTTGTAGACAGATCACTGGCCGCCACTGAAGTGTGTCTGCATGGCACCACAGGGCTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 72 bp CAGCTAGGGAGCTCTGTTTCAGAGGTTGGTTGGCTATaGGTGGCAGGGATCAAGGATGACGGAGCCATGTGT +
Preference number: 3 (lower is better)
Translates to: QLGSSVSEVGWL*VAGIKDDGAMC
Trigger: ACACATGGCTCCGTCATCCTTGATCCCTGCCACCCATAGCCAACCAACCTCTGAAACAGAGCTCCCTAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 72 bp AGCTTTCTCGCACAAGCCCCCGATCCCTCCTCCAGATaGAGACCTCCCCTTACCCAATATTTAGGAACCAAG +
Preference number: 3 (lower is better)
Translates to: SFLAQAPDPSSR*RPPLTQYLGTK
Trigger: CTTGGTTCCTAAATATTGGGTAAGGGGAGGTCTGCATCTGGAGGAGGGATCGGGGGCTTGTGCGAGAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 72 bp GTCATATCCCTTCCCAGTCACACTCACAGAGGCAGTTaGCGGGATCCCAATACAAGGTTTGGAGGAGCTGTC +
Preference number: 3 (lower is better)
Translates to: VISLPSHTHRGS*RDPNTRFGGAV
Trigger: GACAGCTCCTCCAAACCTTGTATTGGGATCCCGGCAACTGCCTCTGTGAGTGTGACTGGGAAGGGATATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 72 bp CTTCATTCACTCCTGGCATATTCCCATGGTCTCAAGTaGCTGACCACCCATTTGGTGGGCCCCTGGCTCAAT +
Preference number: 3 (lower is better)
Translates to: LHSLLAYSHGLK*LTTHLVGPWLN
Trigger: ATTGAGCCAGGGGCCCACCAAATGGGTGGTCAGGCACTTGAGACCATGGGAATATGCCAGGAGTGAATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 72 bp TCTGCCTTTGCTTCATTCACTCCTGGCATATTCCCATaGTCTCAAGTGCCTGACCACCCATTTGGTGGGCCC +
Preference number: 3 (lower is better)
Translates to: SAFASFTPGIFP*SQVPDHPFGGP
Trigger: GGGCCCACCAAATGGGTGGTCAGGCACTTGAGACCATGGGAATATGCCAGGAGTGAATGAAGCAAAGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR TCA 72 bp CATCATTATCCAGGCATGGATGGAACTCTGCTGTGGTaGGGAGGTTGTCTCGCCCACTCACCCAAGTTTTCC +
Preference number: 3 (lower is better)
Translates to: HHYPGMDGTLLW*GGCLAHSPKFS
Trigger: GGAAAACTTGGGTGAGTGGGCGAGACAACCTCCTCACCACAGCAGAGTTCCATCCATGCCTGGATAATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 72 bp TTGCAACTTGGTCTGGGATCAGCTGGGCAGTTCTTTTaGTGGTCTCAGCTGGGTTCAGCTGCCTATCAGCTA +
Preference number: 3 (lower is better)
Translates to: LQLGLGSAGQFF*WSQLGSAAYQL
Trigger: TAGCTGATAGGCAGCTGAACCCAGCTGAGACCAGCAAAAGAACTGCCCAGCTGATCCCAGACCAAGTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 72 bp GCAGTGGACACAAATCCCTCCATCATTATCCAGGCATaGATGGAACTCTGCTGTGGTGAGGAGGTTGTCTCG +
Preference number: 3 (lower is better)
Translates to: AVDTNPSIIIQA*MELCCGEEVVS
Trigger: CGAGACAACCTCCTCACCACAGCAGAGTTCCATCCATGCCTGGATAATGATGGAGGGATTTGTGTCCACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR TCA 72 bp CCGGGATCCCAATACAAGGTTTGGAGGAGCTGTCTCTaGGGTATGCTTTACTGCCCTTCCACACCCAAAAGA +
Preference number: 3 (lower is better)
Translates to: PGSQYKVWRSCL*GMLYCPSTPKR
Trigger: TCTTTTGGGTGTGGAAGGGCAGTAAAGCATACCTCAGAGACAGCTCCTCCAAACCTTGTATTGGGATCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR TCA 72 bp GAAACTCAACTGGCCGAAATGAATAGTGGGGGAATGTaGGCTACTTCAGATAGGGTGGTCAGGGAGGGGAAG +
Preference number: 3 (lower is better)
Translates to: ETQLAEMNSGGM*ATSDRVVREGK
Trigger: CTTCCCCTCCCTGACCACCCTATCTGAAGTAGCTCACATTCCCCCACTATTCATTTCGGCCAGTTGAGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR TCA 72 bp GATGGGAAAATAAGGCACTGTCCAAGTAACACACAGTaGCAGTGGCAAAGTCGTGCTTGCTTCCCAGGTCCC +
Preference number: 3 (lower is better)
Translates to: DGKIRHCPSNTQ*QWQSRACFPGP
Trigger: GGGACCTGGGAAGCAAGCACGACTTTGCCACTGTCACTGTGTGTTACTTGGACAGTGCCTTATTTTCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR TCA 72 bp TGTGGTGCCATGCAGACACACTTCAGTGGCGGCCAGTaGTCTGTCTACAAGGGAGTCTTAGTCTTTTCTGCT +
Preference number: 3 (lower is better)
Translates to: CGAMQTHFSGGQ*SVYKGVLVFSA
Trigger: AGCAGAAAAGACTAAGACTCCCTTGTAGACAGATCACTGGCCGCCACTGAAGTGTGTCTGCATGGCACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 72 bp CAAGATTCAAAGCCCACTGCTCCTTGGGGACCTGTGTaGAGGCTTTTTCTCCCAGAGAAATGTAGACCCTGT +
Preference number: 3 (lower is better)
Translates to: QDSKPTAPWGPV*RLFLPEKCRPC
Trigger: ACAGGGTCTACATTTCTCTGGGAGAAAAAGCCTGCACACAGGTCCCCAAGGAGCAGTGGGCTTTGAATCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 72 bp CCAGTGATCTGTCTACAAGGGAGTCTTAGTCTTTTCTaGTTGGATGCTCCCAGGGACAGATGCCTGCCAACA +
Preference number: 3 (lower is better)
Translates to: PVICLQGSLSLF*LDAPRDRCLPT
Trigger: TGTTGGCAGGCATCTGTCCCTGGGAGCATCCAAGCAGAAAAGACTAAGACTCCCTTGTAGACAGATCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 72 bp AACCACACCCTTGATGTGTCCTTCATGGTTCCCCACTaGAGTGGACACAAATCCCTCCATCATTATCCAGGC +
Preference number: 3 (lower is better)
Translates to: NHTLDVSFMVPH*SGHKSLHHYPG
Trigger: GCCTGGATAATGATGGAGGGATTTGTGTCCACTGCAGTGGGGAACCATGAAGGACACATCAAGGGTGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 72 bp CAGCACCCTCTATGTACATCAGAAAGCAGAGCCTCTTaGGGATACCCGAGGTGTCCATACAGAAGTGTTTGG +
Preference number: 3 (lower is better)
Translates to: QHPLCTSESRAS*GYPRCPYRSVW
Trigger: CCAAACACTTCTGTATGGACACCTCGGGTATCCCCAAGAGGCTCTGCTTTCTGATGTACATAGAGGGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 72 bp GCACCTATTGTGTCAGGCACCTATTGTTCTAGATGCTaGGGAAACAACAGAGAACAGGACAGGCAACGGGTC +
Preference number: 3 (lower is better)
Translates to: APIVSGTYCSRC*GNNREQDRQRV
Trigger: GACCCGTTGCCTGTCCTGTTCTCTGTTGTTTCCCCAGCATCTAGAACAATAGGTGCCTGACACAATAGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 72 bp GCTAGCAGCCTAGAACATTCCAGGCACTGTGGTTTCTaGCTTTGCTTCATTCACTCCTGGCATATTCCCATG +
Preference number: 3 (lower is better)
Translates to: ASSLEHSRHCGF*LCFIHSWHIPM
Trigger: CATGGGAATATGCCAGGAGTGAATGAAGCAAAGGCAGAAACCACAGTGCCTGGAATGTTCTAGGCTGCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 72 bp GAAGCACCTATTGTGTCAGGCACCTATTGTTCTAGATaGTGGGGAAACAACAGAGAACAGGACAGGCAACGG +
Preference number: 3 (lower is better)
Translates to: EAPIVSGTYCSR*WGNNREQDRQR
Trigger: CCGTTGCCTGTCCTGTTCTCTGTTGTTTCCCCAGCATCTAGAACAATAGGTGCCTGACACAATAGGTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR TCA 72 bp ACAAATTTTGTCAGCAGTGGGAGTCCAAGCTGGAGATaGTGGTACCATCCCTTGTCTGCCCTTGGATCAGTT +
Preference number: 3 (lower is better)
Translates to: TNFVSSGSPSWR*WYHPLSALGSV
Trigger: AACTGATCCAAGGGCAGACAAGGGATGGTACCATCATCTCCAGCTTGGACTCCCACTGCTGACAAAATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 72 bp ACCTCACCTCATTTTTGTGGGACCACCCTCCCTACATaGTTTTGGAGGGCAATTATAGAAACCCATCCACTC +
Preference number: 3 (lower is better)
Translates to: TSPHFCGTTLPT*FWRAIIETHPL
Trigger: GAGTGGATGGGTTTCTATAATTGCCCTCCAAAAGCATGTAGGGAGGGTGGTCCCACAAAAATGAGGTGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 72 bp CCCAATACAAGGTTTGGAGGAGCTGTCTCTGAGGTATaGTTTACTGCCCTTCCACACCCAAAAGACCTCATT +
Preference number: 3 (lower is better)
Translates to: PNTRFGGAVSEV*FTALPHPKDLI
Trigger: AATGAGGTCTTTTGGGTGTGGAAGGGCAGTAAAGCATACCTCAGAGACAGCTCCTCCAAACCTTGTATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 72 bp AGCCTAGAACATTCCAGGCACTGTGGTTTCTGCCTTTaGTTCATTCACTCCTGGCATATTCCCATGGTCTCA +
Preference number: 3 (lower is better)
Translates to: SLEHSRHCGFCL*FIHSWHIPMVS
Trigger: TGAGACCATGGGAATATGCCAGGAGTGAATGAAGCAAAGGCAGAAACCACAGTGCCTGGAATGTTCTAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 72 bp TCTCGATCTCCTGGGCTCATGAAATTCTTCCACCTTTaGCTCCCTAAGTGCTGGGATTATGGGTTTATACCC +
Preference number: 3 (lower is better)
Translates to: SRSPGLMKFFHL*LPKCWDYGFIP
Trigger: GGGTATAAACCCATAATCCCAGCACTTAGGGAGGCAAAGGTGGAAGAATTTCATGAGCCCAGGAGATCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR GCA 72 bp GTCTTTTCTGCTTGGATGCTCCCAGGGACAGATGCCTaGCAACAACCTTATGTCTTCACAAAGACTAAAATG +
Preference number: 3 (lower is better)
Translates to: VFSAWMLPGTDA*QQPYVFTKTKM
Trigger: CATTTTAGTCTTTGTGAAGACATAAGGTTGTTGGCAGGCATCTGTCCCTGGGAGCATCCAAGCAGAAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 72 bp CACACAAAATTGTCTTGCTTTCTCAGATATGATCTCTaGCATGACTCCTGCTGGCATGAGGGCAGAGGAAAT +
Preference number: 3 (lower is better)
Translates to: HTKLSCFLRYDL*HDSCWHEGRGN
Trigger: ATTTCCTCTGCCCTCATGCCAGCAGGAGTCATGCCAGAGATCATATCTGAGAAAGCAAGACAATTTTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CCA 72 bp CCTTCCCTGTCCAATACCATAGCCACTAATCACATGTaGCTACTCAGTATTAATGTTGCACTACTGCCAATG +
Preference number: 3 (lower is better)
Translates to: PSLSNTIATNHM*LLSINVALLPM
Trigger: CATTGGCAGTAGTGCAACATTAATACTGAGTAGCCACATGTGATTAGTGGCTATGGTATTGGACAGGGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
CDS-3UTR GCA 90 bp CCCAGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCCCTCGGTCTAGCCGTGCGCTaGCCAGGCGCTCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PRIKPRHPLSESGLPSPLGLAVR*PGAPGL
Trigger: CAGGCCTGGAGCGCCTGGGCAGCGCACGGCTAGACC...GAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp AGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCCCTCCCACCTCCGCAGCGCTTCTaGCTGGCTCTGCAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: RIKPRHPLSESGLPSPLPPPQRF*LALQRR
Trigger: GCGGCGCTGCAGAGCCAGGCAGAAGCGCTGCGGAGG...TGGGAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp CCCAGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCCCTCGTGGCAGTGCCCGTGTaGCCCAGAGGCACGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PRIKPRHPLSESGLPSPLVAVPV*PRGTVQ
Trigger: CTGGACCGTGCCTCTGGGCCACACGGGCACTGCCAC...GAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp AGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCCCTCCCAGGCGTCGTAGTGCGTTaGGTGAGAGGCGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: RIKPRHPLSESGLPSPLPGVVVR*VRGGGR
Trigger: GCGGCCGCCGCCTCTCACCCAACGCACTACGACGCC...TGGGAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp AGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCCCTCCCACGCAGCCGTCGCTGCTaGCGCAGTTCGCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: RIKPRHPLSESGLPSPLPRSRRC*RSSPVA
Trigger: TGCTACCGGCGAACTGCGGCAGCAGCGACGGCTGCG...TGGGAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp AGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCCCTCCCACCTCGCAGCCGTCGCTaGTGCCGCAGTTCGCCGGTA +
Preference number: 4 (lower is better)
Translates to: RIKPRHPLSESGLPSPLPPRSRR*CRSSPV
Trigger: TACCGGCGAACTGCGGCAGCAGCGACGGCTGCGAGG...TGGGAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp AGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCCCTCCCACCGCAGCTCTTAGGCTaGGAACCCCGGAGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: RIKPRHPLSESGLPSPLPPQLLG*EPRSPA
Trigger: GGCCGGACTCCGGGGTTCCCAGCCTAAGAGCTGCGG...TGGGAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp AGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCCCTCCCACCAGTACCAGCACGTTaGCTTCCGCCGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RIKPRHPLSESGLPSPLPPVPAR*LPPPRA
Trigger: GGCCCTGGGCGGCGGAAGCCAACGTGCTGGTACTGG...TGGGAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp GGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCCCTCCCACAGGGAGTGGGTGCTGTaGGGACCGAAGCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: GLSPGIPCQSLDSQAPSHREWVL*GPKQAQ
Trigger: CTGCGCCTGCTTCGGTCCCCACAGCACCCACTCCCT...GTGGGAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp CCCAGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCCCTCCTTGTCGCACAGCGCTaGGATCAGCGCGGACTTCCC +
Preference number: 4 (lower is better)
Translates to: PRIKPRHPLSESGLPSPLLVAQR*DQRGLP
Trigger: GGGAAGTCCGCGCTGATCGCAGCGCTGTGCGACAAG...GAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp AGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCCCTCCCAACCTCGAAGCCATCCTaGGCCGGTGGCAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: RIKPRHPLSESGLPSPLPTSKPS*AGGRSL
Trigger: GAGGCTCCTGCCACCGGCGCAGGATGGCTTCGAGGT...TGGGAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp CAAGCACCCAGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCAGGCGCCCAGTCTTaGTTCCACCTCGGCGCGCGT +
Preference number: 4 (lower is better)
Translates to: QAPRIKPRHPLSESGLPSPGAQS*FHLGAR
Trigger: ACGCGCGCCGAGGTGGAAGCAAGACTGGGCGCCTGG...GCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCTGGGTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp CAAGCACCCAGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCGCGGTCACGTCACCCTaGGGCGGAGGCATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QAPRIKPRHPLSESGLPSAVTSP*GGGMAG
Trigger: TCCAGCCATGCCTCCGCCGCAGGGTGACGTGACCGC...GCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCTGGGTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR TCA 90 bp AGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCCCTCCCACTGGGCGGCAGTCTGTaGATCCCCAGGACGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RIKPRHPLSESGLPSPLPLGGSL*IPRTEV
Trigger: AACCTCCGTCCTGGGGATTCACAGACTGCCGCCCAG...TGGGAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR TCA 90 bp ATCCCCTTCAAGCACCCAGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACACCGGGCCTGGGAAATaGGCGCGCGCTGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: IPFKHPGLSPGIPCQSLDTGPGK*ARAASS
Trigger: AGAGCTGGCAGCGCGCGCTCATTTCCCAGGCCCGGT...GTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCTGGGTGCTTGAAGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp CAAGCACCCAGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCGGGCTGGGAAGGGAGTaGGTGCTGTGGGGACCGAAG +
Preference number: 4 (lower is better)
Translates to: QAPRIKPRHPLSESGLPSGLGRE*VLWGPK
Trigger: CTTCGGTCCCCACAGCACCCACTCCCTTCCCAGCCC...GCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCTGGGTGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp ATCCCCTTCAAGCACCCAGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACAGCAGGCGCAGCGCCTaGGTCGCCAGGATCCAATCC +
Preference number: 4 (lower is better)
Translates to: IPFKHPGLSPGIPCQSLDSRRSA*VARIQS
Trigger: GGATTGGATCCTGGCGACCCAGGCGCTGCGCCTGCT...GTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCTGGGTGCTTGAAGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602269.1
3UTR CAA 72 bp GCAAGGGCCAGACCCACAGGGCCTTACTGTGTGCTGTaGGGCCTCAAGCCTGCCCTCTCTGGACTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: ARARPTGPYCVL*GLKPALSGLCS
Trigger: AGAGCAAAGTCCAGAGAGGGCAGGCTTGAGGCCCAACAGCACACAGTAAGGCCCTGTGGGTCTGGCCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
CDS-3UTR GCA 90 bp GATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCCTTCAAGCCAGGGCGGCCAGCGCTaGCTCTCCCAGGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: DKKSHIPAGSQESTSPSSQGGQR*LSQGWS
Trigger: GCTCCAGCCCTGGGAGAGGCAGCGCTGGCCGCCCTG...GCTTGAAGGGGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp ATCCCCTTCAAGCACCCAGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTGGTTCGGGCAGCGCTaGGAGATGCTGGTGGCAACG +
Preference number: 4 (lower is better)
Translates to: IPFKHPGLSPGIPCQSLDWFGQR*EMLVAT
Trigger: CGTTGCCACCAGCATCTCCCAGCGCTGCCCGAACCA...GTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCTGGGTGCTTGAAGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR TCA 90 bp CCAGACTCTCTGAATCCAGGTGATAAGAAGTCACACATCCCAGCTGGAAGTCAACAGGCGCTCCAGGCCTaGGCGCACCCACGACAGCGC +
Preference number: 4 (lower is better)
Translates to: PDSLNPGDKKSHIPAGSQQALQA*AHPRQR
Trigger: GCGCTGTCGTGGGTGCGCTCAGGCCTGGAGCGCCTG...TTGACTTCCAGCTGGGATGTGTGACTTCTTATCACCTGGATTCAGAGAGTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp CAAGCACCCAGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCGCTGTTCAGCAGAGCTaGTGTCTGATCACGGGCCTG +
Preference number: 4 (lower is better)
Translates to: QAPRIKPRHPLSESGLPSAVQQS*CLITGL
Trigger: CAGGCCCGTGATCAGACAGCAGCTCTGCTGAACAGC...GCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCTGGGTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp CCCAGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCCCTCTGGGATTCTCCATCTTaGCTTCTCCCAGACACTCCG +
Preference number: 4 (lower is better)
Translates to: PRIKPRHPLSESGLPSPLWDSPS*LLPDTP
Trigger: CGGAGTGTCTGGGAGAAGGCAAGATGGAGAATCCCA...GAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp ATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCCTTCAAGCACAGCCCTGGGAGTGGTaGCGCCGCCGCCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: IRSHTSQLEVKSPHPLQAQPWEW*RRRRQT
Trigger: AGTCTGGCGGCGGCGGCGGCACCACTCCCAGGGCTG...TGCTTGAAGGGGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp GTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCCTTCAACGCAGCGCTTCTGCCTaGCTCTGCAGCGCCGCCCGG +
Preference number: 4 (lower is better)
Translates to: VIRSHTSQLEVKSPHPLQRSASA*LCSAAR
Trigger: CCGGGCGGCGCTGCAGAGCCAGGCAGAAGCGCTGCG...TTGAAGGGGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR TCA 90 bp CTGAATCCAGGTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACACGCCACTCCGCCAGCTaGCCCCGCAGAAGTGCCACG +
Preference number: 4 (lower is better)
Translates to: LNPGDKKSHIPAGSQESTRHSAS*PRRSAT
Trigger: CGTGGCACTTCTGCGGGGTCAGCTGGCGGAGTGGCG...TGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCACCTGGATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp CAAGCACCCAGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCGCTGCCTGCTTTCTaGGATCCAGCGCTACATTTC +
Preference number: 4 (lower is better)
Translates to: QAPRIKPRHPLSESGLPSPLPAF*DPALHF
Trigger: GAAATGTAGCGCTGGATCGCAGAAAGCAGGCAGCGG...GCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCTGGGTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp AATCCAGGTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCGGAGAGAGCCCCCAGTaGTGCGCCCCCAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: NPGDKKSHIPAGSQESTSGESPQ*CAPSSA
Trigger: GGCACTGCTGGGGGCGCAGCACTGGGGGCTCTCTCC...GGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCACCTGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp CCAGACTCTCTGAATCCAGGTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGCCACCTGTCGCCGCTaGACCACCCGCAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: PDSLNPGDKKSHIPAGSQATCRR*TTRRPQ
Trigger: CTGTGGCCTGCGGGTGGTGCAGCGGCGACAGGTGGC...TTGACTTCCAGCTGGGATGTGTGACTTCTTATCACCTGGATTCAGAGAGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp GTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCCTTCAAGTCGAGCCAGTGCCGTaGGTTCCAGCCCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: VIRSHTSQLEVKSPHPLQVEPVP*VPAPGP
Trigger: GGGGCCTGGGGCTGGAACCCACGGCACTGGCTCGAC...TTGAAGGGGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp GACTCTCTGAATCCAGGTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGGCGCGTCACCGGGCCTaGGAAATGAGCGCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: DSLNPGDKKSHIPAGSQEARHRA*EMSARC
Trigger: GCAGCGCGCGCTCATTTCCCAGGCCCGGTGACGCGC...CTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCACCTGGATTCAGAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp GATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCCTTCAAGCGGCCCACGTCAGCCTTaGCAGCCACGGCCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: DKKSHIPAGSQESTSPSSGPRQP*QPRPGL
Trigger: TAGACCTGGCCGTGGCTGGCAAGGCTGACGTGGGCC...GCTTGAAGGGGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp GTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCCTTCAAGCAACGCCGCAGCCTTaGTTCGGGCAGCGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: VIRSHTSQLEVKSPHPLQATPQP*FGQRWE
Trigger: CTCCCAGCGCTGCCCGAACCAAGGCTGCGGCGTTGC...TTGAAGGGGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp CTGAATCCAGGTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACAACTAGCCAGCAGAGCTaGCCTCCACGCCCCGGCTCG +
Preference number: 4 (lower is better)
Translates to: LNPGDKKSHIPAGSQESTTSQQS*PPRPGS
Trigger: CGAGCCGGGGCGTGGAGGCCAGCTCTGCTGGCTAGT...TGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCACCTGGATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp AATCCAGGTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCCTCCCACTCCTCACTaGGCAGGCTCAGGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: NPGDKKSHIPAGSQESTSPPTPH*AGSGGA
Trigger: GGCACCCCCTGAGCCTGCCCAGTGAGGAGTGGGAGG...GGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCACCTGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp ATCCCCTTCAAGCACCCAGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACCCTTCCCTTACTGAGTaGATTCTCCAATCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: IPFKHPGLSPGIPCQSLDPSLTE*ILQSPS
Trigger: GGAGGGGGATTGGAGAATGCACTCAGTAAGGGAAGG...GTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCTGGGTGCTTGAAGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp ATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCCTTCAAGCAGGCAGCGCTGGGAGATaGTGGTGGCAACGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: IRSHTSQLEVKSPHPLQAGSAGR*WWQRQQ
Trigger: CTGCTGGCGTTGCCACCAGCATCTCCCAGCGCTGCC...TGCTTGAAGGGGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp ATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCCTTCAAGCACTGACCCCGCAGAAGTaGCACGTCGCATGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: IRSHTSQLEVKSPHPLQALTPQK*HVACPA
Trigger: GGCTGGGCATGCGACGTGGCACTTCTGCGGGGTCAG...TGCTTGAAGGGGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp ATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCCTTCAAGCACTCACGTCGAGCCAGTaGCGTGGGTTCCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: IRSHTSQLEVKSPHPLQALTSSQ*RGFQPQ
Trigger: CTGGGGCTGGAACCCACGGCACTGGCTCGACGTGAG...TGCTTGAAGGGGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp CCAGACTCTCTGAATCCAGGTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGGCAGGCTCAGGGGGTaGCAGCACAGCCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: PDSLNPGDKKSHIPAGSQGRLRG*QHSLSI
Trigger: GATGCTGAGGCTGTGCTGGCACCCCCTGAGCCTGCC...TTGACTTCCAGCTGGGATGTGTGACTTCTTATCACCTGGATTCAGAGAGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp GATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCCTTCAAGCAGCGCTGGGAGATGCTaGTGGCAACGCCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: DKKSHIPAGSQESTSPSSSAGRC*WQRQQQ
Trigger: CTGCTGCTGGCGTTGCCACCAGCATCTCCCAGCGCT...GCTTGAAGGGGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
3UTR CAA 72 bp TCCAGGCATGGATGGAACTCTGCTGTGGTGAGGAGGTaGTCTCGCCCACTCACCCAAGTTTTCCATGCCTGT +
Preference number: 4 (lower is better)
Translates to: SRHGWNSAVVRR*SRPLTQVFHAC
Trigger: ACAGGCATGGAAAACTTGGGTGAGTGGGCGAGACAACCTCCTCACCACAGCAGAGTTCCATCCATGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CAA 72 bp CATTCCTCCAAAGAGCACCACAGGCCAACCACACCCTaGATGTGTCCTTCATGGTTCCCCACTGCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: HSSKEHHRPTTP*MCPSWFPTAVD
Trigger: GTCCACTGCAGTGGGGAACCATGAAGGACACATCAAGGGTGTGGTTGGCCTGTGGTGCTCTTTGGAGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
CDS-3UTR GCA 90 bp GTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCCTTCAATGGGAAGGGAGTGGGTaGTGTGGGGACCGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: VIRSHTSQLEVKSPHPLQWEGSG*CGDRSR
Trigger: CCTGCTTCGGTCCCCACAGCACCCACTCCCTTCCCA...TTGAAGGGGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp GATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCCTTCAAGCACCTTCCCCGCTGCCTaGTTTCTGCGATCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: DKKSHIPAGSQESTSPSSTFPAA*FLRSSA
Trigger: AGCGCTGGATCGCAGAAAGCAGGCAGCGGGGAAGGT...GCTTGAAGGGGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp GTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCCTTCAAGGTAGCAGCAAGGCCTaGACCTGGGCCCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: VIRSHTSQLEVKSPHPLQGSSKA*TWAQSF
Trigger: GAAGGACTGGGCCCAGGTCCAGGCCTTGCTGCTACC...TTGAAGGGGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
3UTR CAA 72 bp CTCACAGAGGCAGTTGCCGGGATCCCAATACAAGGTTaGGAGGAGCTGTCTCTGAGGTATGCTTTACTGCCC +
Preference number: 4 (lower is better)
Translates to: LTEAVAGIPIQG*EELSLRYALLP
Trigger: GGGCAGTAAAGCATACCTCAGAGACAGCTCCTCCAAACCTTGTATTGGGATCCCGGCAACTGCCTCTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
CDS-3UTR GCA 90 bp AATCCAGGTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCGAAATGAGCGCGCGCTaGCAGCTCTCCAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: NPGDKKSHIPAGSQESTSEMSAR*QLSRSQ
Trigger: CTGGCTTCTGGAGAGCTGGCAGCGCGCGCTCATTTC...GGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCACCTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp CTGAATCCAGGTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACAAGCAAGGCCTGGACCTaGGCCCAGTCCTTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LNPGDKKSHIPAGSQESTSKAWT*AQSFSV
Trigger: CACTGAGAAGGACTGGGCCCAGGTCCAGGCCTTGCT...TGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCACCTGGATTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602269.1
3UTR CAA 72 bp AGTCATATCCCTTCCCAGTCACACTCACAGAGGCAGTaGCCGGGATCCCAATACAAGGTTTGGAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SHIPSQSHSQRQ*PGSQYKVWRSC
Trigger: ACAGCTCCTCCAAACCTTGTATTGGGATCCCGGCAACTGCCTCTGTGAGTGTGACTGGGAAGGGATATGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CAA 72 bp CAATCCAAGGGCATGGCTACAGAAAGGCTGGCCCAGTaGGGGTCATTAATGGGTATACCTGGCTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: QSKGMATERLAQ*GSLMGIPGSRT
Trigger: AGTTCTGGAGCCAGGTATACCCATTAATGACCCCAACTGGGCCAGCCTTTCTGTAGCCATGCCCTTGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
CDS-3UTR TCA 90 bp AATCCAGGTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCGTCCCCTTCGGTTCTTaGGTGTCACTCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: NPGDKKSHIPAGSQESTSVPFGS*VSLSRT
Trigger: GGTCCTGGAGAGTGACACTCAAGAACCGAAGGGGAC...GGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCACCTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp GTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCCTTCAAGCTGCAAACCCTCGCTaGCAGCTTTCCCAGGACCTT +
Preference number: 4 (lower is better)
Translates to: VIRSHTSQLEVKSPHPLQAANPR*QLSQDL
Trigger: AAGGTCCTGGGAAAGCTGGCAGCGAGGGTTTGCAGC...TTGAAGGGGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR GCA 90 bp GACTCTCTGAATCCAGGTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGATGCCGACAACCTGCTaGAAACCCTCGCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: DSLNPGDKKSHIPAGSQEMPTTC*KPSLPA
Trigger: AGCTGGCAGCGAGGGTTTGCAGCAGGTTGTCGGCAT...CTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCACCTGGATTCAGAGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp ATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCCTTCAAGCACGGCGGAGGCATGGCTaGAAAGCAACGGGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: IRSHTSQLEVKSPHPLQARRRHG*KATGRE
Trigger: TTCTCTACCCGTTGCTTTCCAGCCATGCCTCCGCCG...TGCTTGAAGGGGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
3UTR CAA 72 bp GCAGCACCCTCTATGTACATCAGAAAGCAGAGCCTCTaGGGGATACCCGAGGTGTCCATACAGAAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: AAPSMYIRKQSL*GIPEVSIQKCL
Trigger: CAAACACTTCTGTATGGACACCTCGGGTATCCCCAAGAGGCTCTGCTTTCTGATGTACATAGAGGGTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
3UTR CAA 72 bp ACCTCATTTTTGTGGGACCACCCTCCCTACATGCTTTaGGAGGGCAATTATAGAAACCCATCCACTCCCCAG +
Preference number: 4 (lower is better)
Translates to: TSFLWDHPPYML*EGNYRNPSTPQ
Trigger: CTGGGGAGTGGATGGGTTTCTATAATTGCCCTCCAAAAGCATGTAGGGAGGGTGGTCCCACAAAAATGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422989.5
CDS-3UTR GCA 90 bp AATCCAGGTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCACCTGATTTCTTCATaGCGACAACCTGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: NPGDKKSHIPAGSQESTSHLISS*RQPAAN
Trigger: GTTTGCAGCAGGTTGTCGGCATGAAGAAATCAGGTG...GGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCACCTGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CCA 90 bp GTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCCCTTCAATTAAGCTCTCGCCCTTaGGATTCTCCATCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: VIRSHTSQLEVKSPHPLQLSSRP*DSPSCL
Trigger: AAGGCAAGATGGAGAATCCCAAGGGCGAGAGCTTAA...TTGAAGGGGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
3UTR CAA 72 bp ATCACCTATTTAGTTAATGATTCTCTGGGTTGCAACTaGGTCTGGGATCAGCTGGGCAGTTCTTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ITYLVNDSLGCN*VWDQLGSSFAG
Trigger: ACCAGCAAAAGAACTGCCCAGCTGATCCCAGACCAAGTTGCAACCCAGAGAATCATTAACTAAATAGGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422989.5
CDS GCA 90 bp CGCCGCTGCACCACCCGCAGGCCACAGGAAGGAGAGAGCCCCCAGTaGTGCGCCCCCAGCAGTGCCCTCGCCCGCCCAGGCGCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: RRCTTRRPQEGESPQ*CAPSSALARPGAQS
Trigger: AGACTGGGCGCCTGGGCGGGCGAGGGCACTGCTGGGGGCGCAGCACTGGGGGCTCTCTCCTTCCTGTGGCCTGCGGGTGGTGCAGCGGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS CCA 90 bp CCCTGGGAGTGGTGCCGCCGCCGCCGCCAGACTAGCCAGCAGAGCTaGCCTCCACGCCCCGGCTCGCAACGCCGCAGCCTTGGTTCGGGC +
Preference number: 5 (lower is better)
Translates to: PWEWCRRRRQTSQQS*PPRPGSQRRSLGSG
Trigger: GCCCGAACCAAGGCTGCGGCGTTGCGAGCCGGGGCGTGGAGGCCAGCTCTGCTGGCTAGTCTGGCGGCGGCGGCGGCACCACTCCCAGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS GCA 90 bp TCCTGCGCCGGTGGCAGGAGCCTCCGCAGCGCTTCTGCCTGGCTCTaGAGCGCCGCCCGGAGGCGCTCTAGCTCCTCGCAGCCGTCGCTG +
Preference number: 5 (lower is better)
Translates to: SCAGGRSLRSASAWL*SAARRRSSSSQPSL
Trigger: CAGCGACGGCTGCGAGGAGCTAGAGCGCCTCCGGGCGGCGCTGCAGAGCCAGGCAGAAGCGCTGCGGAGGCTCCTGCCACCGGCGCAGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS GCA 90 bp CCGCAGAAGTGCCACGTCGCATGCCCAGCCCAGCCCTGGGAGTGGTaGCGCCGCCGCCGCCAGACTAGCCAGCAGAGCTGGCCTCCACGC +
Preference number: 5 (lower is better)
Translates to: PQKCHVACPAQPWEW*RRRRQTSQQSWPPR
Trigger: GCGTGGAGGCCAGCTCTGCTGGCTAGTCTGGCGGCGGCGGCGGCACCACTCCCAGGGCTGGGCTGGGCATGCGACGTGGCACTTCTGCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS CCA 90 bp CTCCAGAAGCCAGGCCCAGGGCACGCTCACGTCGAGCCAGTGCCGTaGGTTCCAGCCCCAGGCCCCGTCGCCACTCCGCCAGCTGACCCC +
Preference number: 5 (lower is better)
Translates to: LQKPGPGHAHVEPVP*VPAPGPVATPPADP
Trigger: GGGGTCAGCTGGCGGAGTGGCGACGGGGCCTGGGGCTGGAACCCACGGCACTGGCTCGACGTGAGCGTGCCCTGGGCCTGGCTTCTGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS GCA 90 bp CAGCTCTCCAGAAGCCAGGCCCAGGGCACGCTCACGTCGAGCCAGTaGCGTGGGTTCCAGCCCCAGGCCCCGTCGCCACTCCGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: QLSRSQAQGTLTSSQ*RGFQPQAPSPLRQL
Trigger: CAGCTGGCGGAGTGGCGACGGGGCCTGGGGCTGGAACCCACGGCACTGGCTCGACGTGAGCGTGCCCTGGGCCTGGCTTCTGGAGAGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS GCA 90 bp CAGGACGCCGTGAGCCGCTCGGTAGCCCAGGCCACCTGTCGCCGCTaGACCACCCGCAGGCCACAGGAAGGAGAGAGCCCCCAGTGCTGC +
Preference number: 5 (lower is better)
Translates to: QDAVSRSVAQATCRR*TTRRPQEGESPQCC
Trigger: GCAGCACTGGGGGCTCTCTCCTTCCTGTGGCCTGCGGGTGGTGCAGCGGCGACAGGTGGCCTGGGCTACCGAGCGGCTCACGGCGTCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS CCA 90 bp CAGCTGACCCCGCAGAAGTGCCACGTCGCATGCCCAGCCCAGCCCTaGGAGTGGTGCCGCCGCCGCCGCCAGACTAGCCAGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: QLTPQKCHVACPAQP*EWCRRRRQTSQQSW
Trigger: CCAGCTCTGCTGGCTAGTCTGGCGGCGGCGGCGGCACCACTCCCAGGGCTGGGCTGGGCATGCGACGTGGCACTTCTGCGGGGTCAGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS TCA 90 bp CCCAGTCTTGCTTCCACCTCGGCGCGCGTCACCGGGCCTGGGAAATaGGCGCGCGCTGCCAGCTCTCCAGAAGCCAGGCCCAGGGCACGC +
Preference number: 5 (lower is better)
Translates to: PSLASTSARVTGPGK*ARAASSPEARPRAR
Trigger: GCGTGCCCTGGGCCTGGCTTCTGGAGAGCTGGCAGCGCGCGCTCATTTCCCAGGCCCGGTGACGCGCGCCGAGGTGGAAGCAAGACTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS CCA 90 bp AGCGCAGTCGGTGGCAGTAGGTCAGCAGCTGAGAAGCCCGGCCCCTaGGCCGCGGCGGACGGAGGCCGAAGAGGCCAGGGAGCGGTGATT +
Preference number: 5 (lower is better)
Translates to: SAVGGSRSAAEKPGP*AAADGGRRGQGAVI
Trigger: AATCACCGCTCCCTGGCCTCTTCGGCCTCCGTCCGCCGCGGCCCAGGGGCCGGGCTTCTCAGCTGCTGACCTACTGCCACCGACTGCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000598324.1
CDS GCA 90 bp TCTGCAGCGCCGCCCGGAGGCGCTCTAGCTCCTCGCAGCCGTCGCTaGTGCCGCAGTTCGCCGGTAGCACAAACAGATCCGCAGCTCCTA +
Preference number: 5 (lower is better)
Translates to: SAAPPGGALAPRSRR*CRSSPVAQTDPQLL
Trigger: TAGGAGCTGCGGATCTGTTTGTGCTACCGGCGAACTGCGGCAGCAGCGACGGCTGCGAGGAGCTAGAGCGCCTCCGGGCGGCGCTGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS-3UTR CAA 90 bp CCCAGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCCCTCGGGCGTCGTAGTGCGTaGGGTGAGAGGCGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: PRIKPRHPLSESGLPSPLGRRSA*GERRRP
Trigger: CGGCCGCCGCCTCTCACCCAACGCACTACGACGCCC...GAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CAA 90 bp GGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCCCTCCCACCGCAACGCCGCAGCCTaGGTTCGGGCAGCGCTGGGA +
Preference number: 5 (lower is better)
Translates to: GLSPGIPCQSLDSQAPSHRNAAA*VRAALG
Trigger: TCCCAGCGCTGCCCGAACCAAGGCTGCGGCGTTGCG...GTGGGAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS GCA 90 bp GATCCAATCCAAGCAGCATGTCCACCACAAGGCCCACGTCAGCCTTaGCAGCCACGGCCAGGTCTAGCCGTGCGCTGCCCAGGCGCTCCA +
Preference number: 5 (lower is better)
Translates to: DPIQAACPPQGPRQP*QPRPGLAVRCPGAP
Trigger: TGGAGCGCCTGGGCAGCGCACGGCTAGACCTGGCCGTGGCTGGCAAGGCTGACGTGGGCCTTGTGGTGGACATGCTGCTTGGATTGGATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS GCA 90 bp TTCCCCAAGCCCGGAGGCCCCAGGAACAAGGCGGTCACGTCACCCTaGGGCGGAGGCATGGCTGGAAAGCAACGGGTAGAGAAGACCTGG +
Preference number: 5 (lower is better)
Translates to: FPKPGGPRNKAVTSP*GGGMAGKQRVEKTW
Trigger: CCAGGTCTTCTCTACCCGTTGCTTTCCAGCCATGCCTCCGCCGCAGGGTGACGTGACCGCCTTGTTCCTGGGGCCTCCGGGCTTGGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS CCA 90 bp TGGGAAGGGAGTGGGTGCTGTGGGGACCGAAGCAGGCGCAGCGCCTaGGTCGCCAGGATCCAATCCAAGCAGCATGTCCACCACAAGGCC +
Preference number: 5 (lower is better)
Translates to: WEGSGCCGDRSRRSA*VARIQSKQHVHHKA
Trigger: GGCCTTGTGGTGGACATGCTGCTTGGATTGGATCCTGGCGACCCAGGCGCTGCGCCTGCTTCGGTCCCCACAGCACCCACTCCCTTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS-3UTR CAA 90 bp CCCAGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCCCTCACCAGTACCAGCACGTaGGCTTCCGCCGCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: PRIKPRHPLSESGLPSPLTSTST*ASAAQG
Trigger: GCCCTGGGCGGCGGAAGCCAACGTGCTGGTACTGGT...GAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS TCA 90 bp AGATCCGCAGCTCCTAACCCCGCGCTGTTCAGCAGAGCTGCTGTCTaGTCACGGGCCTGGGCGGCAGTCTGTGAATCCCCAGGACGGAGG +
Preference number: 5 (lower is better)
Translates to: RSAAPNPALFSRAAV*SRAWAAVCESPGRR
Trigger: CCTCCGTCCTGGGGATTCACAGACTGCCGCCCAGGCCCGTGATCAGACAGCAGCTCTGCTGAACAGCGCGGGGTTAGGAGCTGCGGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS CCA 90 bp CCCCAGGAACAAGGCGGTCACGTCACCCTGCGGCGGAGGCATGGCTaGAAAGCAACGGGTAGAGAAGACCTGGGTCAGGGAGCACCTAGC +
Preference number: 5 (lower is better)
Translates to: PQEQGGHVTLRRRHG*KATGREDLGQGAPS
Trigger: GCTAGGTGCTCCCTGACCCAGGTCTTCTCTACCCGTTGCTTTCCAGCCATGCCTCCGCCGCAGGGTGACGTGACCGCCTTGTTCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS GCA 90 bp TCTTGCCTTCTCCCAGACACTCCGGATCCTCGCCCTCGCCGTCTGTaGGCACGCAGACAAGAGGCGCATCTGGTAGCAGCAAGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: SCLLPDTPDPRPRRL*ARRQEAHLVAARPG
Trigger: TCCAGGCCTTGCTGCTACCAGATGCGCCTCTTGTCTGCGTGCGCACAGACGGCGAGGGCGAGGATCCGGAGTGTCTGGGAGAAGGCAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422989.6
ENST00000601520.1
ENST00000602269.1
CDS GCA 90 bp GCCCGCTCTGAGTCGCCACCACCTGATTTCTTCATGCCGACAACCTaGTGCAAACCCTCGCTGCCAGCTTTCCCAGGACCTTCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: ARSESPPPDFFMPTT*CKPSLPAFPGPSPL
Trigger: CAGCGGGGAAGGTCCTGGGAAAGCTGGCAGCGAGGGTTTGCAGCAGGTTGTCGGCATGAAGAAATCAGGTGGTGGCGACTCAGAGCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS GCA 90 bp CGCTCTGAGTCGCCACCACCTGATTTCTTCATGCCGACAACCTGCTaGAAACCCTCGCTGCCAGCTTTCCCAGGACCTTCCCCGCTGCCT +
Preference number: 5 (lower is better)
Translates to: RSESPPPDFFMPTTC*KPSLPAFPGPSPLP
Trigger: AGGCAGCGGGGAAGGTCCTGGGAAAGCTGGCAGCGAGGGTTTGCAGCAGGTTGTCGGCATGAAGAAATCAGGTGGTGGCGACTCAGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS-3UTR CAA 90 bp AGGATTAAGCCCAGGCATCCCCTGTCAGAGTCTGGACTCCCAAGCCCCCTCCCAAGCGTCTCCACATCCTaGTCGCACAGCGCTGCGATC +
Preference number: 5 (lower is better)
Translates to: RIKPRHPLSESGLPSPLPSVSTS*SHSAAI
Trigger: GATCGCAGCGCTGTGCGACAAGGATGTGGAGACGCT...TGGGAGGGGGCTTGGGAGTCCAGACTCTGACAGGGGATGCCTGGGCTTAATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS GCA 90 bp CTCCACCTGCGTTCTTTAAGCTCTCGCCCTTGGGATTCTCCATCTTaGCTTCTCCCAGACACTCCGGATCCTCGCCCTCGCCGTCTGTGC +
Preference number: 5 (lower is better)
Translates to: LHLRSLSSRPWDSPS*LLPDTPDPRPRRLC
Trigger: GCACAGACGGCGAGGGCGAGGATCCGGAGTGTCTGGGAGAAGGCAAGATGGAGAATCCCAAGGGCGAGAGCTTAAAGAACGCAGGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422989.6
ENST00000601520.1
ENST00000602269.1
CDS GCA 90 bp TTAACGCAGCGGCCCGCTCTGAGTCGCCACCACCTGATTTCTTCATaGCGACAACCTGCTGCAAACCCTCGCTGCCAGCTTTCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: LTQRPALSRHHLISS*RQPAANPRCQLSQD
Trigger: GTCCTGGGAAAGCTGGCAGCGAGGGTTTGCAGCAGGTTGTCGGCATGAAGAAATCAGGTGGTGGCGACTCAGAGCGGGCCGCTGCGTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS GCA 90 bp CCCTCGCTGCCAGCTTTCCCAGGACCTTCCCCGCTGCCTGCTTTCTaGGATCCAGCGCTACATTTCTCCCTTCCCTTACTGAGTGCATTC +
Preference number: 5 (lower is better)
Translates to: PSLPAFPGPSPLPAF*DPALHFSLPLLSAF
Trigger: GAATGCACTCAGTAAGGGAAGGGAGAAATGTAGCGCTGGATCGCAGAAAGCAGGCAGCGGGGAAGGTCCTGGGAAAGCTGGCAGCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS GCA 90 bp CACCACCTGATTTCTTCATGCCGACAACCTGCTGCAAACCCTCGCTaGCAGCTTTCCCAGGACCTTCCCCGCTGCCTGCTTTCTGCGATC +
Preference number: 5 (lower is better)
Translates to: HHLISSCRQPAANPR*QLSQDLPRCLLSAI
Trigger: GATCGCAGAAAGCAGGCAGCGGGGAAGGTCCTGGGAAAGCTGGCAGCGAGGGTTTGCAGCAGGTTGTCGGCATGAAGAAATCAGGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS-3UTR CAA 90 bp GACTCTCTGAATCCAGGTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGCCCAGGCGCCCAGTCTaGCTTCCACCTCGGCGCGCG +
Preference number: 5 (lower is better)
Translates to: DSLNPGDKKSHIPAGSQEPRRPV*LPPRRA
Trigger: CGCGCGCCGAGGTGGAAGCAAGACTGGGCGCCTGGG...CTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCACCTGGATTCAGAGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CAA 90 bp GACTCTCTGAATCCAGGTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGAGGCCCACGTCAGCCTaGCCAGCCACGGCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: DSLNPGDKKSHIPAGSQERPTSA*PATARS
Trigger: AGACCTGGCCGTGGCTGGCAAGGCTGACGTGGGCCT...CTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCACCTGGATTCAGAGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS TCA 90 bp TGCCTGCTTTCTGCGATCCAGCGCTACATTTCTCCCTTCCCTTACTaGGTGCATTCTCCAATCCCCCTCCACCTGCGTTCTTTAAGCTCT +
Preference number: 5 (lower is better)
Translates to: CLLSAIQRYISPFPY*VHSPIPLHLRSLSS
Trigger: AGAGCTTAAAGAACGCAGGTGGAGGGGGATTGGAGAATGCACTCAGTAAGGGAAGGGAGAAATGTAGCGCTGGATCGCAGAAAGCAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS TCA 90 bp CTCCTGCTTTCTGCGATCCAGCGCTACATTTCTCCCTTCCCTTACTaGGTGCATTCTCCAATCCCCCTCCACCTGCGTTCTTTAAGCTCT +
Preference number: 5 (lower is better)
Translates to: LLLSAIQRYISPFPY*VHSPIPLHLRSLSS
Trigger: AGAGCTTAAAGAACGCAGGTGGAGGGGGATTGGAGAATGCACTCAGTAAGGGAAGGGAGAAATGTAGCGCTGGATCGCAGAAAGCAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601520.1
CDS-3UTR CAA 90 bp CTGAATCCAGGTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATGTCCCCTTCGGTTCTaGAGTGTCACTCTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: LNPGDKKSHIPAGSQESTCPLRF*SVTLQD
Trigger: GTCCTGGAGAGTGACACTCAAGAACCGAAGGGGACA...TGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCACCTGGATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS-3UTR CAA 90 bp AATCCAGGTGATAAGAAGTCACACATCCCAGCTGGAAGTCAAGAGTCCACATCCTTTAAGCTCTCGCCCTaGGGATTCTCCATCTTGCCT +
Preference number: 5 (lower is better)
Translates to: NPGDKKSHIPAGSQESTSFKLSP*GFSILP
Trigger: AGGCAAGATGGAGAATCCCAAGGGCGAGAGCTTAAA...GGATGTGGACTCTTGACTTCCAGCTGGGATGTGTGACTTCTTATCACCTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS CCA 72 bp TCCCCTCGGGTCCGGGCAGCACCAGTACCAGCACGTTaGCTTCCGCCGCCCAGGGCCCCGGCGCTGCGGGTG +
Preference number: 6 (lower is better)
Translates to: SPRVRAAPVPAR*LPPPRAPALRV
Trigger: CACCCGCAGCGCCGGGGCCCTGGGCGGCGGAAGCCAACGTGCTGGTACTGGTGCTGCCCGGACCCGAGGGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422989.6
ENST00000598324.1
ENST00000602269.1
CDS GCA 72 bp ACCACCCGCAGGCCACAGGAAGGAGAGAGCCCCCAGTaGTGCGCCCCCAGCAGTGCCCTCGCCCGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: TTRRPQEGESPQ*CAPSSALARPG
Trigger: GCCTGGGCGGGCGAGGGCACTGCTGGGGGCGCAGCACTGGGGGCTCTCTCCTTCCTGTGGCCTGCGGGTGGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS CCA 72 bp CCAGGCCCAGGGCACGCTCACGTCGAGCCAGTGCCGTaGGTTCCAGCCCCAGGCCCCGTCGCCACTCCGCCA +
Preference number: 6 (lower is better)
Translates to: PGPGHAHVEPVP*VPAPGPVATPP
Trigger: TGGCGGAGTGGCGACGGGGCCTGGGGCTGGAACCCACGGCACTGGCTCGACGTGAGCGTGCCCTGGGCCTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS GCA 72 bp GGTGGCAGGAGCCTCCGCAGCGCTTCTGCCTGGCTCTaGAGCGCCGCCCGGAGGCGCTCTAGCTCCTCGCAG +
Preference number: 6 (lower is better)
Translates to: GGRSLRSASAWL*SAARRRSSSSQ
Trigger: CTGCGAGGAGCTAGAGCGCCTCCGGGCGGCGCTGCAGAGCCAGGCAGAAGCGCTGCGGAGGCTCCTGCCACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS CCA 72 bp GGTGGCAGTAGGTCAGCAGCTGAGAAGCCCGGCCCCTaGGCCGCGGCGGACGGAGGCCGAAGAGGCCAGGGA +
Preference number: 6 (lower is better)
Translates to: GGSRSAAEKPGP*AAADGGRRGQG
Trigger: TCCCTGGCCTCTTCGGCCTCCGTCCGCCGCGGCCCAGGGGCCGGGCTTCTCAGCTGCTGACCTACTGCCACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000598324.1
CDS GCA 72 bp AGAAGCCAGGCCCAGGGCACGCTCACGTCGAGCCAGTaGCGTGGGTTCCAGCCCCAGGCCCCGTCGCCACTC +
Preference number: 6 (lower is better)
Translates to: RSQAQGTLTSSQ*RGFQPQAPSPL
Trigger: GAGTGGCGACGGGGCCTGGGGCTGGAACCCACGGCACTGGCTCGACGTGAGCGTGCCCTGGGCCTGGCTTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS CAA 90 bp CCGGAGTCCGGCCGTCCCTCGGGGGCCTCGAGCGTCTCCACATCCTaGTCGCACAGCGCTGCGATCAGCGCGGACTTCCCCAAGCCCGGA +
Preference number: 6 (lower is better)
Translates to: PESGRPSGASSVSTS*SHSAAISADFPKPG
Trigger: TCCGGGCTTGGGGAAGTCCGCGCTGATCGCAGCGCTGTGCGACAAGGATGTGGAGACGCTCGAGGCCCCCGAGGGACGGCCGGACTCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422989.6
ENST00000598324.1
ENST00000602269.1
CDS CCA 72 bp CGGCTCGCAACGCCGCAGCCTTGGTTCGGGCAGCGCTaGGAGATGCTGGTGGCAACGCCAGCAGCAGTGCCC +
Preference number: 6 (lower is better)
Translates to: RLATPQPWFGQR*EMLVATPAAVP
Trigger: GGGCACTGCTGCTGGCGTTGCCACCAGCATCTCCCAGCGCTGCCCGAACCAAGGCTGCGGCGTTGCGAGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS CAA 72 bp GGCCGTCCCTCGGGGGCCTCGAGCGTCTCCACATCCTaGTCGCACAGCGCTGCGATCAGCGCGGACTTCCCC +
Preference number: 6 (lower is better)
Translates to: GRPSGASSVSTS*SHSAAISADFP
Trigger: GGGGAAGTCCGCGCTGATCGCAGCGCTGTGCGACAAGGATGTGGAGACGCTCGAGGCCCCCGAGGGACGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422989.6
ENST00000598324.1
ENST00000602269.1
CDS GCA 72 bp CCCGGAGGCCCCAGGAACAAGGCGGTCACGTCACCCTaGGGCGGAGGCATGGCGAGCAAAAAGCCGACCCAC +
Preference number: 6 (lower is better)
Translates to: PGGPRNKAVTSP*GGGMASKKPTH
Trigger: GTGGGTCGGCTTTTTGCTCGCCATGCCTCCGCCGCAGGGTGACGTGACCGCCTTGTTCCTGGGGCCTCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000598324.1
CDS GCA 72 bp GGCCTCGAGCGTCTCCACATCCTTGTCGCACAGCGCTaGGATCAGCGCGGACTTCCCCAAGCCCGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: GLERLHILVAQR*DQRGLPQARRP
Trigger: GGGCCTCCGGGCTTGGGGAAGTCCGCGCTGATCGCAGCGCTGTGCGACAAGGATGTGGAGACGCTCGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422989.6
ENST00000598324.1
ENST00000602269.1
CDS GCA 72 bp CCGCCCGGAGGCGCTCTAGCTCCTCGCAGCCGTCGCTaGTGCCGCAGTTCGCCGGTAGCACAAACAGATCCG +
Preference number: 6 (lower is better)
Translates to: PPGGALAPRSRR*CRSSPVAQTDP
Trigger: CGGATCTGTTTGTGCTACCGGCGAACTGCGGCAGCAGCGACGGCTGCGAGGAGCTAGAGCGCCTCCGGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS TCA 72 bp CCGCGGCGGACGGAGGCCGAAGAGGCCAGGGAGCGGTaGTTTAGAGATGCCGGGACCCGTCCCGGTAGCTTT +
Preference number: 6 (lower is better)
Translates to: PRRTEAEEARER*FRDAGTRPGSF
Trigger: AAAGCTACCGGGACGGGTCCCGGCATCTCTAAATCACCGCTCCCTGGCCTCTTCGGCCTCCGTCCGCCGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000598324.1
CDS GCA 72 bp CCCGGAGGCCCCAGGAACAAGGCGGTCACGTCACCCTaGGGCGGAGGCATGGCTGGAAAGCAACGGGTAGAG +
Preference number: 6 (lower is better)
Translates to: PGGPRNKAVTSP*GGGMAGKQRVE
Trigger: CTCTACCCGTTGCTTTCCAGCCATGCCTCCGCCGCAGGGTGACGTGACCGCCTTGTTCCTGGGGCCTCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS CCA 72 bp CAGTCTTGCTTCCACCTCGGCGCGCGTCACCGGGCCTaGGAAATGAGCGCGCGCTGCCAGCTCTCCAGAAGC +
Preference number: 6 (lower is better)
Translates to: QSCFHLGARHRA*EMSARCQLSRS
Trigger: GCTTCTGGAGAGCTGGCAGCGCGCGCTCATTTCCCAGGCCCGGTGACGCGCGCCGAGGTGGAAGCAAGACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS CAA 72 bp CCAAGCAGCATGTCCACCACAAGGCCCACGTCAGCCTaGCCAGCCACGGCCAGGTCTAGCCGTGCGCTGCCC +
Preference number: 6 (lower is better)
Translates to: PSSMSTTRPTSA*PATARSSRALP
Trigger: GGGCAGCGCACGGCTAGACCTGGCCGTGGCTGGCAAGGCTGACGTGGGCCTTGTGGTGGACATGCTGCTTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS CAA 90 bp GGATCCAATCCAAGCAGCATGTCCACCACAAGGCCCACGTCAGCCTaGCCAGCCACGGCCAGGTCTAGCCGTGCGCTGCCCAGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: GSNPSSMSTTRPTSA*PATARSSRALPRRS
Trigger: GGAGCGCCTGGGCAGCGCACGGCTAGACCTGGCCGTGGCTGGCAAGGCTGACGTGGGCCTTGTGGTGGACATGCTGCTTGGATTGGATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS GCA 72 bp TCTAGCTCTGCTGCACCCAACACCTCGAAGCCATCCTaGGCCGGTGGCAGGAGCCTCCGCAGCGCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: SSSAAPNTSKPS*AGGRSLRSASA
Trigger: GGCAGAAGCGCTGCGGAGGCTCCTGCCACCGGCGCAGGATGGCTTCGAGGTGTTGGGTGCAGCAGAGCTAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS GCA 72 bp CAAGCAGCATGTCCACCACAAGGCCCACGTCAGCCTTaGCAGCCACGGCCAGGTCTAGCCGTGCGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: QAACPPQGPRQP*QPRPGLAVRCP
Trigger: TGGGCAGCGCACGGCTAGACCTGGCCGTGGCTGGCAAGGCTGACGTGGGCCTTGTGGTGGACATGCTGCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS GCA 72 bp CTCCCAGACACTCCGGATCCTCGCCCTCGCCGTCTGTaGGCACGCAGACAAGAGGCGCATCTGGTAGCAGCA +
Preference number: 6 (lower is better)
Translates to: LPDTPDPRPRRL*ARRQEAHLVAA
Trigger: TGCTGCTACCAGATGCGCCTCTTGTCTGCGTGCGCACAGACGGCGAGGGCGAGGATCCGGAGTGTCTGGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422989.6
ENST00000601520.1
ENST00000602269.1
CDS CCA 72 bp AGTGGGTGCTGTGGGGACCGAAGCAGGCGCAGCGCCTaGGTCGCCAGGATCCAATCCAAGCAGCATGTCCAC +
Preference number: 6 (lower is better)
Translates to: SGCCGDRSRRSA*VARIQSKQHVH
Trigger: GTGGACATGCTGCTTGGATTGGATCCTGGCGACCCAGGCGCTGCGCCTGCTTCGGTCCCCACAGCACCCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS CCA 72 bp ACGCAGACAAGAGGCGCATCTGGTAGCAGCAAGGCCTaGACCTGGGCCCAGTCCTTCTCAGTGGGGGCCCCA +
Preference number: 6 (lower is better)
Translates to: TQTRGASGSSKA*TWAQSFSVGAP
Trigger: TGGGGCCCCCACTGAGAAGGACTGGGCCCAGGTCCAGGCCTTGCTGCTACCAGATGCGCCTCTTGTCTGCGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422989.6
ENST00000601520.1
ENST00000602269.1
CDS TCA 72 bp GCTCCTAACCCCGCGCTGTTCAGCAGAGCTGCTGTCTaGTCACGGGCCTGGGCGGCAGTCTGTGAATCCCCA +
Preference number: 6 (lower is better)
Translates to: APNPALFSRAAV*SRAWAAVCESP
Trigger: TGGGGATTCACAGACTGCCGCCCAGGCCCGTGATCAGACAGCAGCTCTGCTGAACAGCGCGGGGTTAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS CCA 72 bp CAAGGCGGTCACGTCACCCTGCGGCGGAGGCATGGCTaGAAAGCAACGGGTAGAGAAGACCTGGGTCAGGGA +
Preference number: 6 (lower is better)
Translates to: QGGHVTLRRRHG*KATGREDLGQG
Trigger: TCCCTGACCCAGGTCTTCTCTACCCGTTGCTTTCCAGCCATGCCTCCGCCGCAGGGTGACGTGACCGCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602269.1
CDS GCA 72 bp CGGCCCGCTCTGAGTCGCCACCACCTGATTTCTTCATaGCGACAACCTGCTGCAAACCCTCGCTGCCAGCTT +
Preference number: 6 (lower is better)
Translates to: RPALSRHHLISS*RQPAANPRCQL
Trigger: AAGCTGGCAGCGAGGGTTTGCAGCAGGTTGTCGGCATGAAGAAATCAGGTGGTGGCGACTCAGAGCGGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS CAA 90 bp CCTCCACCTGCGTTCTTTAAGCTCTCGCCCTTGGGATTCTCCATCTaGCCTTCTCCCAGACACTCCGGATCCTCGCCCTCGCCGTCTGTG +
Preference number: 6 (lower is better)
Translates to: PPPAFFKLSPLGFSI*PSPRHSGSSPSPSV
Trigger: CACAGACGGCGAGGGCGAGGATCCGGAGTGTCTGGGAGAAGGCAAGATGGAGAATCCCAAGGGCGAGAGCTTAAAGAACGCAGGTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422989.6
ENST00000601520.1
ENST00000602269.1
CDS GCA 72 bp CGTTCTTTAAGCTCTCGCCCTTGGGATTCTCCATCTTaGCTTCTCCCAGACACTCCGGATCCTCGCCCTCGC +
Preference number: 6 (lower is better)
Translates to: RSLSSRPWDSPS*LLPDTPDPRPR
Trigger: GCGAGGGCGAGGATCCGGAGTGTCTGGGAGAAGGCAAGATGGAGAATCCCAAGGGCGAGAGCTTAAAGAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422989.6
ENST00000601520.1
ENST00000602269.1
CDS GCA 72 bp CCAGCTTTCCCAGGACCTTCCCCGCTGCCTGCTTTCTaGGATCCAGCGCTACATTTCTCCCTTCCCTTACTG +
Preference number: 6 (lower is better)
Translates to: PAFPGPSPLPAF*DPALHFSLPLL
Trigger: CAGTAAGGGAAGGGAGAAATGTAGCGCTGGATCGCAGAAAGCAGGCAGCGGGGAAGGTCCTGGGAAAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422989.6
ENST00000602269.1
CDS CAA 72 bp GCGTTCTTTAAGCTCTCGCCCTTGGGATTCTCCATCTaGCCTTCTCCCAGACACTCCGGATCCTCGCCCTCG +
Preference number: 6 (lower is better)
Translates to: AFFKLSPLGFSI*PSPRHSGSSPS
Trigger: CGAGGGCGAGGATCCGGAGTGTCTGGGAGAAGGCAAGATGGAGAATCCCAAGGGCGAGAGCTTAAAGAACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422989.6
ENST00000601520.1
ENST00000602269.1