RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IQSEC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000144711

Ensembl transcript IDs: ENST00000273221.8, ENST00000473088.1, ENST00000474467.1, ENST00000613206.2, ENST00000618604.4, ENST00000646269.1, ENST00000647458.1, ENST00000648114.1, ENST00000648386.1

Found 1328 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCCTCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTaGGAACGCGGCCCCGCGGCCCGCAGAGTCAGGCGTGAGCTTCGC +
Preference number: 1 (lower is better)
Translates to: PLSSCRPATAHHAVH*ERGPAARRVRRELR
Trigger: GCGAAGCTCACGCCTGACTCTGCGGGCCGCGGGGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGAGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR CCA 90 bp TGGACCATGGGAAGGCAGCGGGGGCTCCGCCGGGCACTCGTCGGCTaGGGTCACACGGGCCACGGTGAGGACACAGGGGTTCTGCTAGCA +
Preference number: 1 (lower is better)
Translates to: WTMGRQRGLRRALVG*GHTGHGEDTGVLLA
Trigger: TGCTAGCAGAACCCCTGTGTCCTCACCGTGGCCCGTGTGACCCCAGCCGACGAGTGCCCGGCGGAGCCCCCGCTGCCTTCCCATGGTCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR CCA 90 bp AGCACAGCTGAGAGTCATGTGATGCCCTGGCAGCTCACTGGACCATaGGAAGGCAGCGGGGGCTCCGCCGGGCACTCGTCGGCTGGGGTC +
Preference number: 1 (lower is better)
Translates to: STAESHVMPWQLTGP*EGSGGSAGHSSAGV
Trigger: GACCCCAGCCGACGAGTGCCCGGCGGAGCCCCCGCTGCCTTCCCATGGTCCAGTGAGCTGCCAGGGCATCACATGACTCTCAGCTGTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR CCA 90 bp CCGTGGGTGACTCGGGCACAGACCTGCCGCGTGCAGGTCTGGCCCTaGGGAGCGCATGGTGTCACCACAACACAGAAGCGACAAGAGCAC +
Preference number: 1 (lower is better)
Translates to: PWVTRAQTCRVQVWP*GAHGVTTTQKRQEH
Trigger: GTGCTCTTGTCGCTTCTGTGTTGTGGTGACACCATGCGCTCCCCAGGGCCAGACCTGCACGCGGCAGGTCTGTGCCCGAGTCACCCACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR CCA 90 bp TATGGCCCGTGGGTGACTCGGGCACAGACCTGCCGCGTGCAGGTCTaGCCCTGGGGAGCGCATGGTGTCACCACAACACAGAAGCGACAA +
Preference number: 1 (lower is better)
Translates to: YGPWVTRAQTCRVQV*PWGAHGVTTTQKRQ
Trigger: TTGTCGCTTCTGTGTTGTGGTGACACCATGCGCTCCCCAGGGCCAGACCTGCACGCGGCAGGTCTGTGCCCGAGTCACCCACGGGCCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR TCA 90 bp CTGCAGTGGCTCGAAAGGCTGAAACTACAAAGTATGGCCCGTGGGTaGCTCGGGCACAGACCTGCCGCGTGCAGGTCTGGCCCTGGGGAG +
Preference number: 1 (lower is better)
Translates to: LQWLERLKLQSMARG*LGHRPAACRSGPGE
Trigger: CTCCCCAGGGCCAGACCTGCACGCGGCAGGTCTGTGCCCGAGTCACCCACGGGCCATACTTTGTAGTTTCAGCCTTTCGAGCCACTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR CCA 90 bp CAACACAGAAGCGACAAGAGCACAGCTGAGAGTCATGTGATGCCCTaGCAGCTCACTGGACCATGGGAAGGCAGCGGGGGCTCCGCCGGG +
Preference number: 1 (lower is better)
Translates to: QHRSDKSTAESHVMP*QLTGPWEGSGGSAG
Trigger: CCCGGCGGAGCCCCCGCTGCCTTCCCATGGTCCAGTGAGCTGCCAGGGCATCACATGACTCTCAGCTGTGCTCTTGTCGCTTCTGTGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR CCA 90 bp TCGGGCACAGACCTGCCGCGTGCAGGTCTGGCCCTGGGGAGCGCATaGTGTCACCACAACACAGAAGCGACAAGAGCACAGCTGAGAGTC +
Preference number: 1 (lower is better)
Translates to: SGTDLPRAGLALGSA*CHHNTEATRAQLRV
Trigger: GACTCTCAGCTGTGCTCTTGTCGCTTCTGTGTTGTGGTGACACCATGCGCTCCCCAGGGCCAGACCTGCACGCGGCAGGTCTGTGCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR CCA 90 bp ACGGCTGCAGTGGCTCGAAAGGCTGAAACTACAAAGTATGGCCCGTaGGTGACTCGGGCACAGACCTGCCGCGTGCAGGTCTGGCCCTGG +
Preference number: 1 (lower is better)
Translates to: TAAVARKAETTKYGP*VTRAQTCRVQVWPW
Trigger: CCAGGGCCAGACCTGCACGCGGCAGGTCTGTGCCCGAGTCACCCACGGGCCATACTTTGTAGTTTCAGCCTTTCGAGCCACTGCAGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR TCA 90 bp TACTGGTGTGCGTGCTGGATGTGCTGGGGTGGGTGGTGGTGGTGGTaGTGGTGGTACGGGGGAGGGTTCTGCATGTGGCAGTACTGGGTG +
Preference number: 1 (lower is better)
Translates to: YWCACWMCWGGWWWW*WWYGGGFCMWQYWV
Trigger: CACCCAGTACTGCCACATGCAGAACCCTCCCCCGTACCACCATCACCACCACCACCACCCACCCCAGCACATCCAGCACGCACACCAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618604.4
3UTR CCA 90 bp CAGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTaGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGAAAGC +
Preference number: 1 (lower is better)
Translates to: QDTPRTVPQAGSPRL*SLQDGDGEGEFPES
Trigger: GCTTTCAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR TCA 90 bp AAACACTCTCTGAGGGCTTCGGCCTGGTGTGGGTTGGAGGCGGGATaGGGACGTTATGGTGTTGGGGAGACGAGGATGAGAGCTGGTCAC +
Preference number: 1 (lower is better)
Translates to: KHSLRASAWCGLEAG*GRYGVGETRMRAGH
Trigger: GTGACCAGCTCTCATCCTCGTCTCCCCAACACCATAACGTCCTCATCCCGCCTCCAACCCACACCAGGCCGAAGCCCTCAGAGAGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR CCA 90 bp TCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATaGAGGGCAGGCCTCCTCCCTCTTGTCCTGTGCTCAGCACCCCCA +
Preference number: 1 (lower is better)
Translates to: SRCDCTQKGDADASE*RAGLLPLVLCSAPP
Trigger: TGGGGGTGCTGAGCACAGGACAAGAGGGAGGAGGCCTGCCCTCCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR TCA 90 bp TTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTCTaGGGCCCACCCATCCCTCAGACTGAGGTGAGCAGAGCCCAGGGT +
Preference number: 1 (lower is better)
Translates to: FNTTWLAHRFKADGV*GPPIPQTEVSRAQG
Trigger: ACCCTGGGCTCTGCTCACCTCAGTCTGAGGGATGGGTGGGCCTCAGACACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
3UTR TCA 90 bp GGAGCGCATGGTGTCACCACAACACAGAAGCGACAAGAGCACAGCTaGGAGTCATGTGATGCCCTGGCAGCTCACTGGACCATGGGAAGG +
Preference number: 1 (lower is better)
Translates to: GAHGVTTTQKRQEHS*ESCDALAAHWTMGR
Trigger: CCTTCCCATGGTCCAGTGAGCTGCCAGGGCATCACATGACTCTCAGCTGTGCTCTTGTCGCTTCTGTGTTGTGGTGACACCATGCGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR TCA 90 bp CAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTaGGCAGACACCAAAGAAATGCCACGCCAATGGGAGGACACAGGT +
Preference number: 1 (lower is better)
Translates to: QPSLDPITRSHAVSF*ADTKEMPRQWEDTG
Trigger: ACCTGTGTCCTCCCATTGGCGTGGCATTTCTTTGGTGTCTGCTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR CCA 90 bp CGCCCTGGGTTGCTAAACGCTAAAGTCAACCTTCAGGTTCGAGAGTaGTTCCTGATGAAAACACTCTCTGAGGGCTTCGGCCTGGTGTGG +
Preference number: 1 (lower is better)
Translates to: RPGLLNAKVNLQVRE*FLMKTLSEGFGLVW
Trigger: CCACACCAGGCCGAAGCCCTCAGAGAGTGTTTTCATCAGGAACCACTCTCGAACCTGAAGGTTGACTTTAGCGTTTAGCAACCCAGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR TCA 90 bp AATACATTTTGCAAACGCACAACACGCAGAGCGCAGCCTCACAGCTaGCGCCAGATGACATGCAGCAGTTTAACGCTTCCAGGTCGGAAC +
Preference number: 1 (lower is better)
Translates to: NTFCKRTTRRAQPHS*RQMTCSSLTLPGRN
Trigger: GTTCCGACCTGGAAGCGTTAAACTGCTGCATGTCATCTGGCGTCAGCTGTGAGGCTGCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR CCA 90 bp AGTGAGTGCCCAGAGTCACAACAAGTAATGGGGAAACTCATCAGCTaGAGATCTGGGTCTGGCCAACAGGGCAACTTCTGGACTTTTCAG +
Preference number: 1 (lower is better)
Translates to: SECPESQQVMGKLIS*RSGSGQQGNFWTFQ
Trigger: CTGAAAAGTCCAGAAGTTGCCCTGTTGGCCAGACCCAGATCTCCAGCTGATGAGTTTCCCCATTACTTGTTGTGACTCTGGGCACTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR GCA 90 bp CTGGTCACTTTCATGTTGGAGATGAACACTTCTGCCGTGTATGGGTaGCCCTCTCGGAGGACTCTGAATGAGTGTGCGTCAAATCATATG +
Preference number: 1 (lower is better)
Translates to: LVTFMLEMNTSAVYG*PSRRTLNECASNHM
Trigger: CATATGATTTGACGCACACTCATTCAGAGTCCTCCGAGAGGGGCACCCATACACGGCAGAAGTGTTCATCTCCAACATGAAAGTGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR GCA 90 bp AACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTaGAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCAT +
Preference number: 1 (lower is better)
Translates to: NSEAKDIFQEEMHAV*SLDVTAHRRAMQMH
Trigger: ATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR TCA 90 bp GAACACTTCTGCCGTGTATGGGTGCCCCTCTCGGAGGACTCTGAATaGGTGTGCGTCAAATCATATGCGCATAAAAGAAACATGGATCAT +
Preference number: 1 (lower is better)
Translates to: EHFCRVWVPLSEDSE*VCVKSYAHKRNMDH
Trigger: ATGATCCATGTTTCTTTTATGCGCATATGATTTGACGCACACTCATTCAGAGTCCTCCGAGAGGGGCACCCATACACGGCAGAAGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR GCA 90 bp ATCTGCTGTCTTTTCAGCTCATTAAGAAAAACAAGAGGCTCCTGCTaGATGCAGTGTGTGAGGGAAAGATCACTGCACTGGGTGCTGAAG +
Preference number: 1 (lower is better)
Translates to: ICCLFSSLRKTRGSC*MQCVRERSLHWVLK
Trigger: CTTCAGCACCCAGTGCAGTGATCTTTCCCTCACACACTGCATGCAGCAGGAGCCTCTTGTTTTTCTTAATGAGCTGAAAAGACAGCAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR CCA 90 bp TTGCTCTCTCTGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTaGTACGGTGATCTCAATGATATGACCGAGGGTGGGAGGGATGTG +
Preference number: 1 (lower is better)
Translates to: LLSLEINKVLGLQIC*YGDLNDMTEGGRDV
Trigger: CACATCCCTCCCACCCTCGGTCATATCATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCAGAGAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR GCA 90 bp TGTATCAGTGTCCTCAGTCAGTCCAATGTCTTCAAGGAAAGTGAGTaGCCAGAGTCACAACAAGTAATGGGGAAACTCATCAGCTGGAGA +
Preference number: 1 (lower is better)
Translates to: CISVLSQSNVFKESE*PESQQVMGKLISWR
Trigger: TCTCCAGCTGATGAGTTTCCCCATTACTTGTTGTGACTCTGGGCACTCACTTTCCTTGAAGACATTGGACTGACTGAGGACACTGATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR CCA 90 bp CCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTaGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACAGA +
Preference number: 1 (lower is better)
Translates to: PFRKSNSVPNGLNLF*NNLKVTVRLSSQHR
Trigger: TCTGTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR TCA 90 bp ATTTTGTATCAGTGTCCTCAGTCAGTCCAATGTCTTCAAGGAAAGTaGGTGCCCAGAGTCACAACAAGTAATGGGGAAACTCATCAGCTG +
Preference number: 1 (lower is better)
Translates to: ILYQCPQSVQCLQGK*VPRVTTSNGETHQL
Trigger: CAGCTGATGAGTTTCCCCATTACTTGTTGTGACTCTGGGCACTCACTTTCCTTGAAGACATTGGACTGACTGAGGACACTGATACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR TCA 90 bp AACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACAGAAGAGGGTaGGAAAAGCTGACATACTCAATATGTAATCGCTTTACTTCAACG +
Preference number: 1 (lower is better)
Translates to: NLKVTVRLSSQHRRG*EKLTYSICNRFTST
Trigger: CGTTGAAGTAAAGCGATTACATATTGAGTATGTCAGCTTTTCTCACCCTCTTCTGTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR TCA 90 bp TTACAGTTAGACTCTCCTCCCAGCACAGAAGAGGGTGAGAAAAGCTaGCATACTCAATATGTAATCGCTTTACTTCAACGATGTGTTTAC +
Preference number: 1 (lower is better)
Translates to: LQLDSPPSTEEGEKS*HTQYVIALLQRCVY
Trigger: GTAAACACATCGTTGAAGTAAAGCGATTACATATTGAGTATGTCAGCTTTTCTCACCCTCTTCTGTGCTGGGAGGAGAGTCTAACTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp GTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCCGTAGGCGACCCCCGGGCGTaGCCTGTGTGGTGTGCAGGT +
Preference number: 2 (lower is better)
Translates to: VPHVGRGQRRVAVGMGPVGDPRA*PVWCAG
Trigger: ACCTGCACACCACACAGGGCACGCCCGGGGGTCGCC...TACGGGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618604.4
3UTR-3UTR CCA 90 bp CTGTGTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCAGCCCTGTGGGCTCCTaGGGCTCCGGTTGGGCCGTG +
Preference number: 2 (lower is better)
Translates to: LCAPRGPRAAAGGRGHGPSPVGS*GSGWAV
Trigger: CACGGCCCAACCGGAGCCCCAGGAGCCCACAGGGCT...GGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618604.4
3UTR-3UTR CCA 90 bp GCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCGGTTTGGTGTGCGGCTaGCGACCCCCGGGCGTGCCC +
Preference number: 2 (lower is better)
Translates to: APGLVCGWRPPGVPCVVCGLVCG*RPPGVP
Trigger: GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACC...GCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
3UTR-3UTR TCA 90 bp GTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCCGTATCCCTCAGACTGAGGTaGGCAGAGCCCAGGGTGCCA +
Preference number: 2 (lower is better)
Translates to: VPHVGRGQRRVAVGMGPVSLRLR*AEPRVP
Trigger: TGGCACCCTGGGCTCTGCTCACCTCAGTCTGAGGGA...TACGGGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618604.4
3UTR-3UTR GCA 90 bp GCTCACTGGACCATGGGAAGGCAGCGGGGGCTCCGCCGGGCACTCGTCGGCTGGGCTCCCCTCTCCTCCTaGCGTCCGGCCACGGCTCAC +
Preference number: 2 (lower is better)
Translates to: AHWTMGRQRGLRRALVGWAPLSS*RPATAH
Trigger: GTGAGCCGTGGCCGGACGGCAGGAGGAGAGGGGAGC...CCAGCCGACGAGTGCCCGGCGGAGCCCCCGCTGCCTTCCCATGGTCCAGTGAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR CCA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGAGCCCTGTGGGCTCCTaGGGCTCCGGTTGGGCCGTG +
Preference number: 2 (lower is better)
Translates to: CPGFGVRLATPGRALCGVSPVGS*GSGWAV
Trigger: CACGGCCCAACCGGAGCCCCAGGAGCCCACAGGGCT...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
3UTR-3UTR CCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCTGGGTGGCCCCCATaGGGGCCGTGGTGGTACTGG +
Preference number: 2 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCAGWPP*GPWWYW
Trigger: CCAGTACCACCACGGCCCCCATGGGGGCCACCCAGC...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000618604.4
3UTR-3UTR TCA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGGCTCCGGTTGGGCCGTaGGGGGCAGAGGGGAGAGAT +
Preference number: 2 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRAPVGP*GAEGRD
Trigger: ATCTCTCCCCTCTGCCCCTCACGGCCCAACCGGAGC...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
3UTR-3UTR CCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGAAGTGCCCCGGGTTTaGTGTGCGGCTGGCGACCCC +
Preference number: 2 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCEVPRV*CAAGDP
Trigger: GGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
3UTR-3UTR GCA 90 bp GTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCCGTAGTGCCCTGTGTGGTGTaGAGGTGTTTCAGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: VPHVGRGQRRVAVGMGPVVPCVV*RCFREP
Trigger: AGGCTCCCTGAAACACCTGCACACCACACAGGGCAC...TACGGGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618604.4
3UTR-3UTR CCA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGACAACACCAGCCCTGTaGGCTCCTGGGGCTCCGGTT +
Preference number: 2 (lower is better)
Translates to: CPGFGVRLATPGRALCGVTTPAL*APGAPV
Trigger: AACCGGAGCCCCAGGAGCCCACAGGGCTGGTGTTGT...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
3UTR-3UTR CCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCCTGAGGGCTTCGGCCTaGTGTGGGTTGGAGGCGGGA +
Preference number: 2 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAALRASA*CGLEAG
Trigger: TCCCGCCTCCAACCCACACCAGGCCGAAGCCCTCAG...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR CCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCCAGCTCACTGGACCATaGGAAGGCAGCGGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAAQLTGP*EGSGGS
Trigger: GGAGCCCCCGCTGCCTTCCCATGGTCCAGTGAGCTG...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR TCA 90 bp GTGGGTGACTCGGGCACAGACCTGCCGCGTGCAGGTCTGGCCCTGGGGAGCGCAGCGCAGCCTCACAGCTaGCGCCAGATGACATGCAGC +
Preference number: 2 (lower is better)
Translates to: VGDSGTDLPRAGLALGSAAQPHS*RQMTCS
Trigger: GCTGCATGTCATCTGGCGTCAGCTGTGAGGCTGCGC...TGCGCTCCCCAGGGCCAGACCTGCACGCGGCAGGTCTGTGCCCGAGTCACCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR GCA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGGTGGTGGTACTGGTGTaGGTGCTGGATGTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRVVVLV*VLDVLG
Trigger: CCCCAGCACATCCAGCACGCACACCAGTACCACCAC...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618604.4
3UTR-3UTR CCA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGCCCTGTGGGCTCCTaGGGCTCCGGTTGGGCCGTG +
Preference number: 2 (lower is better)
Translates to: RTHRGQCHRLAARGCGACSPVGS*GSGWAV
Trigger: CACGGCCCAACCGGAGCCCCAGGAGCCCACAGGGCT...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR GCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCCGAGGCTGTGGAGCTTaGAGGATGGCGATGGAGAGG +
Preference number: 2 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAARGCGA*RMAMER
Trigger: CCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCG...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGCGGGCACTCGTCGGCTaGGGTCACACGGGCCACGGT +
Preference number: 2 (lower is better)
Translates to: AARGCGACRMAMERESFLRALVG*GHTGHG
Trigger: ACCGTGGCCCGTGTGACCCCAGCCGACGAGTGCCCG...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR CCA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGACCTGACAGCCCAGCCTaGACCCAATCACACGGTCCC +
Preference number: 2 (lower is better)
Translates to: EDSATGWQPEAVELAGWRPDSPA*TQSHGP
Trigger: GGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCCCTGACAGCCCAGCCTaGACCCAATCACACGGTCCC +
Preference number: 2 (lower is better)
Translates to: RTHRGQCHRLAARGCGACPDSPA*TQSHGP
Trigger: GGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp GTGGGTGACTCGGGCACAGACCTGCCGCGTGCAGGTCTGGCCCTGGGGAGCGCAGTGGAGCTTGCAGGATaGCGATGGAGAGGGAGAGTT +
Preference number: 2 (lower is better)
Translates to: VGDSGTDLPRAGLALGSAVELAG*RWRGRV
Trigger: AACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCAC...TGCGCTCCCCAGGGCCAGACCTGCACGCGGCAGGTCTGTGCCCGAGTCACCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR TCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCGTGATCTCAATGATATaGCCGAGGGTGGGAGGGATG +
Preference number: 2 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAAVISMI*PRVGGM
Trigger: CATCCCTCCCACCCTCGGTCATATCATTGAGATCAC...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp GAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCAGGCGCAGCCTCACAGCTaGCGCCAGATGACATGCAGC +
Preference number: 2 (lower is better)
Translates to: EHTECGGKPREGLSGFQQAQPHS*RQMTCS
Trigger: GCTGCATGTCATCTGGCGTCAGCTGTGAGGCTGCGC...CTGCTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCGAAACCTCACTAGCCTaGAGGAACACACTGAGTGCG +
Preference number: 2 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAAETSLA*RNTLSA
Trigger: CGCACTCAGTGTGTTCCTTCAGGCTAGTGAGGTTTC...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGTACGCGAGGCCCTGCTaGCCAGCACAGCTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: KEHTECGGKPREGLSGFQYARPC*PAQLQD
Trigger: GTCCTGGAGCTGTGCTGGGCAGCAGGGCCTCGCGTA...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCACAAGAGGCTCCTGCTaGATGCAGTGTGTGAGGGAA +
Preference number: 2 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAATRGSC*MQCVRE
Trigger: TTCCCTCACACACTGCATGCAGCAGGAGCCTCTTGT...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCGACAGTGCCACAGGCTaGCAGCCCGAGGCTGTGGAG +
Preference number: 2 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSDSATG*QPEAVE
Trigger: CTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTC...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGGACAGTGCCACAGGCTaGCAGCCCGAGGCTGTGGAG +
Preference number: 2 (lower is better)
Translates to: AARGCGACRMAMERESFLDSATG*QPEAVE
Trigger: CTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTC...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGGGTTTGGTGTGCGGCTaGCGACCCCCGGGCGTGCCC +
Preference number: 2 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSEGLVCG*RPPGVP
Trigger: GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACC...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR CAA 90 bp ACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTaGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGAAAGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: TPRTVPQAGSPRLWS*QDGDGEGEFPESPS
Trigger: GGAGGGGCTTTCAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGGCGCAGCCTCACAGCTaGCGCCAGATGACATGCAGC +
Preference number: 2 (lower is better)
Translates to: AARGCGACRMAMERESFLAQPHS*RQMTCS
Trigger: GCTGCATGTCATCTGGCGTCAGCTGTGAGGCTGCGC...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGCCTGAAGGAACACACTaGGTGCGGCGGGAAACCCCG +
Preference number: 2 (lower is better)
Translates to: AARGCGACRMAMERESFLPEGTH*VRRETP
Trigger: CGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGG...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGACGAGGCTGTGGAGCTTaGAGGATGGCGATGGAGAGG +
Preference number: 2 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGRGCGA*RMAMER
Trigger: CCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCG...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCCACCACGCTGTCCACTaGGAACGCGGCCCCGCGGCC +
Preference number: 2 (lower is better)
Translates to: PVALSQHPASAVNICCLFHHAVH*ERGPAA
Trigger: GGCCGCGGGGCCGCGTTCCCAGTGGACAGCGTGGTG...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp GAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCAGGAAATGCCACGCCAATaGGAGGACACAGGTGGGCGG +
Preference number: 2 (lower is better)
Translates to: EHTECGGKPREGLSGFQQEMPRQ*EDTGGR
Trigger: CCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTC...CTGCTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCGGCAGCCCGAGGCTGTaGAGCTTGCAGGATGGCGAT +
Preference number: 2 (lower is better)
Translates to: LTSLKEHTECGGKPREGLGSPRL*SLQDGD
Trigger: ATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCC...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGCAGTTCAACACTACTTaGCTGGCTCACCGTTTCAAG +
Preference number: 2 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRQFNTT*LAHRFK
Trigger: CTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTG...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
3UTR-3UTR TCA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGGCCAGCCAGCCAAGGTaGCACACAGCCAGAGGGGGC +
Preference number: 2 (lower is better)
Translates to: PGRNSLLKIARQSALGSLASQPR*HTARGG
Trigger: GCCCCCTCTGGCTGTGTGTCACCTTGGCTGGCTGGC...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGAAGGGTGGGAGGGATGTaGGGAGGGAAATCGGCAAAA +
Preference number: 2 (lower is better)
Translates to: EDSATGWQPEAVELAGWRRVGGM*GGKSAK
Trigger: TTTTGCCGATTTCCCTCCTCACATCCCTCCCACCCT...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGAAGAGGGAGAGTTTCCTaGAAGCCCCTCCTGGGGTTT +
Preference number: 2 (lower is better)
Translates to: EDSATGWQPEAVELAGWRRGRVS*KPLLGF
Trigger: AAACCCCAGGAGGGGCTTTCAGGAAACTCTCCCTCT...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCGCTCCCCTCTCCTCCTaGCGTCCGGCCACGGCTCAC +
Preference number: 2 (lower is better)
Translates to: PVALSQHPASAVNICCLFAPLSS*RPATAH
Trigger: GTGAGCCGTGGCCGGACGGCAGGAGGAGAGGGGAGC...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGCGAGGCTGTGGAGCTTaGAGGATGGCGATGGAGAGG +
Preference number: 2 (lower is better)
Translates to: AARGCGACRMAMERESFLRGCGA*RMAMER
Trigger: CCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCG...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp CTGTGTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCCTTCGTTTTCTAGGTTaGGTTTTCATATGCATGTAC +
Preference number: 2 (lower is better)
Translates to: LCAPRGPRAAAGGRGHGPLRFLG*VFICMY
Trigger: GTACATGCATATGAAAACCCAACCTAGAAAACGAAG...GGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000618604.4
3UTR-3UTR TCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCCCGCAGAGTCAGGCGTaGGCTTCGCCCTTTCTGAAA +
Preference number: 2 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSPQSQA*ASPFLK
Trigger: TTTCAGAAAGGGCGAAGCTCACGCCTGACTCTGCGG...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAAGGGTGGGAGGGATGTaGGGAGGGAAATCGGCAAAA +
Preference number: 2 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGRVGGM*GGKSAK
Trigger: TTTTGCCGATTTCCCTCCTCACATCCCTCCCACCCT...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCGTGATCTCAATGATATaGCCGAGGGTGGGAGGGATG +
Preference number: 2 (lower is better)
Translates to: RTHRGQCHRLAARGCGACVISMI*PRVGGM
Trigger: CATCCCTCCCACCCTCGGTCATATCATTGAGATCAC...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGCATGCTGTTTCTTTCTaGGCAGACACCAAAGAAATG +
Preference number: 2 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRHAVSF*ADTKEM
Trigger: CATTTCTTTGGTGTCTGCTCAGAAAGAAACAGCATG...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR TCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGGTGCCAGGCTTCTTGTaGGGGAGGTGTCCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: KEHTECGGKPREGLSGFQVPGFL*GRCPLK
Trigger: CTTCAAGGGACACCTCCCTCACAAGAAGCCTGGCAC...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCTCACCGTTTCAAGGCTaGTGGTGTCTGAGGCCCACC +
Preference number: 2 (lower is better)
Translates to: LTSLKEHTECGGKPREGLSPFQG*WCLRPT
Trigger: GGTGGGCCTCAGACACCATCAGCCTTGAAACGGTGA...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR TCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCTACATGGAATTACGGTaGTCACTGCTACCACTCAGA +
Preference number: 2 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAAYMELR*SLLPLR
Trigger: TCTGAGTGGTAGCAGTGATCACCGTAATTCCATGTA...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR GCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGGCTCCCCTCTCCTCCTaGCGTCCGGCCACGGCTCAC +
Preference number: 2 (lower is better)
Translates to: VQSRCDCTQKGDADASEWAPLSS*RPATAH
Trigger: GTGAGCCGTGGCCGGACGGCAGGAGGAGAGGGGAGC...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGAAGGAACACACTGAGTaGGGCGGGAAACCCCGGGAA +
Preference number: 2 (lower is better)
Translates to: AARGCGACRMAMERESFLKEHTE*GGKPRE
Trigger: TTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGGTGCCCTGTGTGGTGTaGAGGTGTTTCAGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: AARGCGACRMAMERESFLVPCVV*RCFREP
Trigger: AGGCTCCCTGAAACACCTGCACACCACACAGGGCAC...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR GCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGATGGCAACAGAAGTaGCCCGGGTTTGGTGTGCGG +
Preference number: 2 (lower is better)
Translates to: LTSLKEHTECGGKPREGLRWQQK*PGFGVR
Trigger: CCGCACACCAAACCCGGGGCACTTCTGTTGCCATCT...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR TCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCAGAGGGAGAGTTTCCTaGAAGCCCCTCCTGGGGTTT +
Preference number: 2 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSRGRVS*KPLLGF
Trigger: AAACCCCAGGAGGGGCTTTCAGGAAACTCTCCCTCT...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp GCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCCTAGATTGCTGTATTTaGTCTCTCTGGAGATTAACA +
Preference number: 2 (lower is better)
Translates to: APGLVCGWRPPGVPCVVCLDCCI*SLWRLT
Trigger: TGTTAATCTCCAGAGAGAGCAAATACAGCAATCTAG...GCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR CCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCGACAGTGCCACAGGCTaGCAGCCCGAGGCTGTGGAG +
Preference number: 2 (lower is better)
Translates to: PVALSQHPASAVNICCLFDSATG*QPEAVE
Trigger: CTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTC...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp GGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGGGCAGAGGGGAGAGATaGCAACAGAAGTGCCCCGGG +
Preference number: 2 (lower is better)
Translates to: GGGSSTLLGWLTVSRLMVGRGER*QQKCPG
Trigger: CCCGGGGCACTTCTGTTGCCATCTCTCCCCTCTGCC...CACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
3UTR-3UTR TCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCGAAACCTCACTAGCCTaGAGGAACACACTGAGTGCG +
Preference number: 2 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSETSLA*RNTLSA
Trigger: CGCACTCAGTGTGTTCCTTCAGGCTAGTGAGGTTTC...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCTCCCTCAGACTGAGGTaGGCAGAGCCCAGGGTGCCA +
Preference number: 2 (lower is better)
Translates to: PVALSQHPASAVNICCLFSLRLR*AEPRVP
Trigger: TGGCACCCTGGGCTCTGCTCACCTCAGTCTGAGGGA...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR TCA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGAATTGCTAATGTGGACTaGAACGCCTGCCTTTCACAC +
Preference number: 2 (lower is better)
Translates to: EDSATGWQPEAVELAGWRIANVD*NACLSH
Trigger: GTGTGAAAGGCAGGCGTTTCAGTCCACATTAGCAAT...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR TCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGTTGGGGAGACGAGGATaGGAGCTGGTCACTTTCATG +
Preference number: 2 (lower is better)
Translates to: KEHTECGGKPREGLSGFQLGRRG*ELVTFM
Trigger: CATGAAAGTGACCAGCTCTCATCCTCGTCTCCCCAA...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR TCA 90 bp GGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTCTGAGTGGCAGTACTGGGTGTaGTGCCCGTGCATGGCGGCC +
Preference number: 2 (lower is better)
Translates to: GSSTLLGWLTVSRLMVSEWQYWV*CPCMAA
Trigger: GGCCGCCATGCACGGGCATCACACCCAGTACTGCCA...CTCAGACACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618604.4
3UTR-3UTR GCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCGTTCCTATTCATTACTaGTACCCTTCAGAAAGAGCA +
Preference number: 2 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAAVPIHY*YPSERA
Trigger: TGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAAC...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp GTGGGTGACTCGGGCACAGACCTGCCGCGTGCAGGTCTGGCCCTGGGGAGCGCATGGAGATTAACAAAGTaGTTGGTTTGCAGATTTGCT +
Preference number: 2 (lower is better)
Translates to: VGDSGTDLPRAGLALGSAWRLTK*LVCRFA
Trigger: AGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA...TGCGCTCCCCAGGGCCAGACCTGCACGCGGCAGGTCTGTGCCCGAGTCACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR GCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGAATTGCGAGACAGAGTaGTTTGGGGAGCCTGGCTTT +
Preference number: 2 (lower is better)
Translates to: KEHTECGGKPREGLSGFQNCETE*FGEPGF
Trigger: AAAGCCAGGCTCCCCAAAGCACTCTGTCTCGCAATT...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCTGTATTTGCTCTCTCTaGAGATTAACAAAGTGCTTG +
Preference number: 2 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAACICSL*RLTKCL
Trigger: CAAGCACTTTGTTAATCTCCAGAGAGAGCAAATACA...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCGAAATGCCACGCCAATaGGAGGACACAGGTGGGCGG +
Preference number: 2 (lower is better)
Translates to: PVALSQHPASAVNICCLFEMPRQ*EDTGGR
Trigger: CCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTC...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp GGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGGGGCATAGTCTGGTGTaGGCGAGATGGACACTCTCG +
Preference number: 2 (lower is better)
Translates to: GGGSSTLLGWLTVSRLMVGHSLV*ARWTLS
Trigger: CGAGAGTGTCCATCTCGCCCACACCAGACTATGCCC...CACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618604.4
3UTR-3UTR GCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTTTTCCAAGAGGAGATaGATGCTGTGTGCAGTCTCG +
Preference number: 2 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSFSKRR*MLCAVS
Trigger: CGAGACTGCACACAGCATGCATCTCCTCTTGGAAAA...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCGAGACAGAGTGCTTTaGGGAGCCTGGCTTTTAAAA +
Preference number: 2 (lower is better)
Translates to: KEHTECGGKPREGLSGFQRDRVL*GAWLLK
Trigger: TTTTAAAAGCCAGGCTCCCCAAAGCACTCTGTCTCG...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGGACGAGGATGAGAGCTaGTCACTTTCATGTTGGAGA +
Preference number: 2 (lower is better)
Translates to: KEHTECGGKPREGLSGFQDEDES*SLSCWR
Trigger: TCTCCAACATGAAAGTGACCAGCTCTCATCCTCGTC...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR TCA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCGAGCTTCGCCCTTTCTaGAAGGGCCTCCGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: DVFTVTPIHFANAQHAERELRPF*KGLRLG
Trigger: GCCCAGGCGGAGGCCCTTTCAGAAAGGGCGAAGCTC...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp GGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTCTGAGCCGCAGAGTCAGGCGTaGGCTTCGCCCTTTCTGAAA +
Preference number: 2 (lower is better)
Translates to: GSSTLLGWLTVSRLMVSEPQSQA*ASPFLK
Trigger: TTTCAGAAAGGGCGAAGCTCACGCCTGACTCTGCGG...CTCAGACACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR GCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCACAAAGTGCTTGGTTTaGAGATTTGCTGGTACGGTG +
Preference number: 2 (lower is better)
Translates to: LTSLKEHTECGGKPREGLTKCLV*RFAGTV
Trigger: CACCGTACCAGCAAATCTGCAAACCAAGCACTTTGT...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCACGCCAATACATTTTaGAAACGCACAACACGCAGA +
Preference number: 2 (lower is better)
Translates to: KEHTECGGKPREGLSGFQHANTF*KRTTRR
Trigger: TCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTG...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGAAGGAACACACTGAGTaGGGCGGGAAACCCCGGGAA +
Preference number: 2 (lower is better)
Translates to: VQSRCDCTQKGDADASEWKEHTE*GGKPRE
Trigger: TTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp GGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTCTGAGAGATGGCAACAGAAGTaGCCCGGGTTTGGTGTGCGG +
Preference number: 2 (lower is better)
Translates to: GSSTLLGWLTVSRLMVSERWQQK*PGFGVR
Trigger: CCGCACACCAAACCCGGGGCACTTCTGTTGCCATCT...CTCAGACACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
3UTR-3UTR CCA 90 bp TCACAGCTGACGCCAGATGACATGCAGCAGTTTAACGCTTCCAGGTCGGAACAGAAATCGGCAAAACCCTaGCCAGCCAGCCAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: SQLTPDDMQQFNASRSEQKSAKP*PASQPR
Trigger: CCTTGGCTGGCTGGCTGGCCAGGGTTTTGCCGATTT...CTGTTCCGACCTGGAAGCGTTAAACTGCTGCATGTCATCTGGCGTCAGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGGTTTGCAGATTTGCTaGTACGGTGATCTCAATGAT +
Preference number: 2 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGGLQIC*YGDLND
Trigger: ATCATTGAGATCACCGTACCAGCAAATCTGCAAACC...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGGCCAGCCAGCCAAGGTaGCACACAGCCAGAGGGGGC +
Preference number: 2 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQASQPR*HTARGG
Trigger: GCCCCCTCTGGCTGTGTGTCACCTTGGCTGGCTGGC...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGCATGCTGTTTCTTTCTaGGCAGACACCAAAGAAATG +
Preference number: 2 (lower is better)
Translates to: AARGCGACRMAMERESFLHAVSF*ADTKEM
Trigger: CATTTCTTTGGTGTCTGCTCAGAAAGAAACAGCATG...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp GGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTCTGAGTGGACACTCTCGTGTTaGTGTAGCTCTCCGGCGCAT +
Preference number: 2 (lower is better)
Translates to: GSSTLLGWLTVSRLMVSEWTLSC*CSSPAH
Trigger: ATGCGCCGGAGAGCTACATCAACACGAGAGTGTCCA...CTCAGACACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618604.4
3UTR-3UTR GCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGGGACCTGATTCTAATTaGTTAAAACAACTCGGAGGC +
Preference number: 2 (lower is better)
Translates to: KEHTECGGKPREGLSGFQGPDSN*LKQLGG
Trigger: GCCTCCGAGTTGTTTTAAGCAATTAGAATCAGGTCC...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCGGACCTGATTCTAATTaGTTAAAACAACTCGGAGGC +
Preference number: 2 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSGPDSN*LKQLGG
Trigger: GCCTCCGAGTTGTTTTAAGCAATTAGAATCAGGTCC...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCCCTGAAAGCCCCTCCTaGGGTTTTCTGTCTGTTCCT +
Preference number: 2 (lower is better)
Translates to: PVALSQHPASAVNICCLFPESPS*GFLSVP
Trigger: AGGAACAGACAGAAAACCCCAGGAGGGGCTTTCAGG...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGGAGCTTCGCCCTTTCTaGAAGGGCCTCCGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQELRPF*KGLRLG
Trigger: GCCCAGGCGGAGGCCCTTTCAGAAAGGGCGAAGCTC...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGTTGCAATGCTGCCTTaGCTATTGTTGTTACATAAA +
Preference number: 2 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGVAMLP*LLLLHK
Trigger: TTTATGTAACAACAATAGTCAAGGCAGCATTGCAAC...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCTCCGGTTGGGCCGTaGGGGGCAGAGGGGAGAGAT +
Preference number: 2 (lower is better)
Translates to: SVPIHYCYPSERAILCQTAPVGP*GAEGRD
Trigger: ATCTCTCCCCTCTGCCCCTCACGGCCCAACCGGAGC...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR GCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGTACGCGAGGCCCTGCTaGCCAGCACAGCTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQYARPC*PAQLQD
Trigger: GTCCTGGAGCTGTGCTGGGCAGCAGGGCCTCGCGTA...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGTCAGCTGTGAACATCTaGTGTCTTTTCAGCTCATTA +
Preference number: 2 (lower is better)
Translates to: AARGCGACRMAMERESFLSAVNI*CLFSSL
Trigger: TAATGAGCTGAAAAGACAGCAGATGTTCACAGCTGA...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp GAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCAGTGTATTTGCTCTCTCTaGAGATTAACAAAGTGCTTG +
Preference number: 2 (lower is better)
Translates to: EHTECGGKPREGLSGFQQCICSL*RLTKCL
Trigger: CAAGCACTTTGTTAATCTCCAGAGAGAGCAAATACA...CTGCTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGGAAAGATCACTGCACTaGGTGCTGAAGACATTTTTA +
Preference number: 2 (lower is better)
Translates to: AARGCGACRMAMERESFLERSLH*VLKTFL
Trigger: TAAAAATGTCTTCAGCACCCAGTGCAGTGATCTTTC...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCCCGCAGAGTCAGGCGTaGGCTTCGCCCTTTCTGAAA +
Preference number: 2 (lower is better)
Translates to: DVFTVTPIHFANAQHAERPQSQA*ASPFLK
Trigger: TTTCAGAAAGGGCGAAGCTCACGCCTGACTCTGCGG...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCCACCCTGCTCAGTGTTaGAATGCTGCCTTGACTATT +
Preference number: 2 (lower is better)
Translates to: PVALSQHPASAVNICCLFHPAQC*NAALTI
Trigger: AATAGTCAAGGCAGCATTGCAACACTGAGCAGGGTG...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGGAGATGCATGCTGTGTaGAGTCTCGATGTGACTGCA +
Preference number: 2 (lower is better)
Translates to: VQSRCDCTQKGDADASEWEMHAV*SLDVTA
Trigger: TGCAGTCACATCGAGACTGCACACAGCATGCATCTC...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGCCAGCTGTCCTGAGTTaGTACTGTAGAGTGTACTGC +
Preference number: 2 (lower is better)
Translates to: VQSRCDCTQKGDADASEWPAVLS*YCRVYC
Trigger: GCAGTACACTCTACAGTAGCAACTCAGGACAGCTGG...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR CCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGCCTGACAGCCCAGCCTaGACCCAATCACACGGTCCC +
Preference number: 2 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQPDSPA*TQSHGP
Trigger: GGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCCGAGACAGAGTGCTTTaGGGAGCCTGGCTTTTAAAA +
Preference number: 2 (lower is better)
Translates to: PVALSQHPASAVNICCLFRDRVL*GAWLLK
Trigger: TTTTAAAAGCCAGGCTCCCCAAAGCACTCTGTCTCG...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATTCAACACTACTTGGCTaGCTCACCGTTTCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: DACCVQSRCDCTQKGDADSTLLG*LTVSRL
Trigger: CAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGA...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR TCA 90 bp GCTGGAGATCTGGGTCTGGCCAACAGGGCAACTTCTGGACTTTTCAGAAAAAGTCCTCTCGGAGGACTCTaGATGAGTGTGCGTCAAATC +
Preference number: 2 (lower is better)
Translates to: AGDLGLANRATSGLFRKSPLGGL*MSVRQI
Trigger: GATTTGACGCACACTCATTCAGAGTCCTCCGAGAGG...ACTTTTTCTGAAAAGTCCAGAAGTTGCCCTGTTGGCCAGACCCAGATCTCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR GCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTACTGTAGAGTGTACTaGAGTTTAGCTATTTGCTTA +
Preference number: 2 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSYCRVY*SLAICL
Trigger: TAAGCAAATAGCTAAACTGCAGTACACTCTACAGTA...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR CCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACGAAATGCCACGCCAATaGGAGGACACAGGTGGGCGG +
Preference number: 2 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHEMPRQ*EDTGGR
Trigger: CCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTC...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTGGCAGAGGGGAGAGATaGCAACAGAAGTGCCCCGGG +
Preference number: 2 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVGRGER*QQKCPG
Trigger: CCCGGGGCACTTCTGTTGCCATCTCTCCCCTCTGCC...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR CAA 90 bp CTACCACTCAGAAAACAAAACGGGAAACACACACACCGCCCTGGGTaGCTAAACGCTAAAGTCAACCTTCAGGTTCGAGAGTGGTTCCTG +
Preference number: 2 (lower is better)
Translates to: LPLRKQNGKHTHRPG*LNAKVNLQVREWFL
Trigger: CAGGAACCACTCTCGAACCTGAAGGTTGACTTTAGCGTTTAGCAACCCAGGGCGGTGTGTGTGTTTCCCGTTTTGTTTTCTGAGTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR TCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACCGATGCAGATGCATCTaGATGGAGGGCAGGCCTCCT +
Preference number: 2 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHRCRCI*MEGRPP
Trigger: AGGAGGCCTGCCCTCCATTCAGATGCATCTGCATCG...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTTGTGCAGTCTCGATGTaGCTGCACACAGAAGGGCGA +
Preference number: 2 (lower is better)
Translates to: CPLKSLNSLGIQDLILIACAVSM*LHTEGR
Trigger: TCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACA...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACAAATCGGCAAAACCCTaGCCAGCCAGCCAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHKSAKP*PASQPR
Trigger: CCTTGGCTGGCTGGCTGGCCAGGGTTTTGCCGATTT...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTGTGGAGCTTGCAGGATaGCGATGGAGAGGGAGAGTT +
Preference number: 2 (lower is better)
Translates to: CPLKSLNSLGIQDLILIAVELAG*RWRGRV
Trigger: AACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCAC...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR CAA 90 bp AATCGCTTTACTTCAACGATGTGTTTACAGTCACGCCAATACATTTaGCAAACGCACAACACGCAGAGCGCAGCCTCACAGCTGACGCCA +
Preference number: 2 (lower is better)
Translates to: NRFTSTMCLQSRQYI*QTHNTQSAASQLTP
Trigger: TGGCGTCAGCTGTGAGGCTGCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATCGTTGAAGTAAAGCGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGAGGGTGGGAGGGATGTaGGGAGGGAAATCGGCAAAA +
Preference number: 2 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQRVGGM*GGKSAK
Trigger: TTTTGCCGATTTCCCTCCTCACATCCCTCCCACCCT...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATCATGCTGTTTCTTTCTaGGCAGACACCAAAGAAATG +
Preference number: 2 (lower is better)
Translates to: DACCVQSRCDCTQKGDADHAVSF*ADTKEM
Trigger: CATTTCTTTGGTGTCTGCTCAGAAAGAAACAGCATG...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCGTTCCTATTCATTACTaGTACCCTTCAGAAAGAGCA +
Preference number: 2 (lower is better)
Translates to: PVALSQHPASAVNICCLFVPIHY*YPSERA
Trigger: TGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAAC...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTAGAACTGTAAGACTGTaGGTGCTTACCTGCGGGCAC +
Preference number: 2 (lower is better)
Translates to: CPLKSLNSLGIQDLILIARTVRL*VLTCGH
Trigger: GTGCCCGCAGGTAAGCACGCACAGTCTTACAGTTCT...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp TGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTGGTACGGTGATCTCAATGAAATCGGCAAAACCCTaGCCAGCCAGCCAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: WRLTKCLVCRFAGTVISMKSAKP*PASQPR
Trigger: CCTTGGCTGGCTGGCTGGCCAGGGTTTTGCCGATTT...CATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACAGTCATGTGATGCCCTaGCAGCTCACTGGACCATGG +
Preference number: 2 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHSHVMP*QLTGPW
Trigger: CCATGGTCCAGTGAGCTGCCAGGGCATCACATGACT...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR TCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACGAAACCTCACTAGCCTaGAGGAACACACTGAGTGCG +
Preference number: 2 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHETSLA*RNTLSA
Trigger: CGCACTCAGTGTGTTCCTTCAGGCTAGTGAGGTTTC...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTCCGAAGCTGTGGCTCTaGCAGGTGGGATCTCTAAAG +
Preference number: 2 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVPKLWL*QVGSLK
Trigger: CTTTAGAGATCCCACCTGTCAGAGCCACAGCTTCGG...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTTGTGCAGTCTCGATGTaGCTGCACACAGAAGGGCGA +
Preference number: 2 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVCAVSM*LHTEGR
Trigger: TCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACA...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCCTAGATTGCTGTATTTaGTCTCTCTGGAGATTAACA +
Preference number: 2 (lower is better)
Translates to: PVALSQHPASAVNICCLFLDCCI*SLWRLT
Trigger: TGTTAATCTCCAGAGAGAGCAAATACAGCAATCTAG...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp TCACAGCTGACGCCAGATGACATGCAGCAGTTTAACGCTTCCAGGTCGGAACAGGTTCCTATTCATTACTaGTACCCTTCAGAAAGAGCA +
Preference number: 2 (lower is better)
Translates to: SQLTPDDMQQFNASRSEQVPIHY*YPSERA
Trigger: TGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAAC...CTGTTCCGACCTGGAAGCGTTAAACTGCTGCATGTCATCTGGCGTCAGCTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGGAAAGATCACTGCACTaGGTGCTGAAGACATTTTTA +
Preference number: 2 (lower is better)
Translates to: VQSRCDCTQKGDADASEWERSLH*VLKTFL
Trigger: TAAAAATGTCTTCAGCACCCAGTGCAGTGATCTTTC...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR TCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTGCTGCATGCAGTGTGTaGGGGAAAGATCACTGCACT +
Preference number: 2 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVAACSV*GKDHCT
Trigger: AGTGCAGTGATCTTTCCCTCACACACTGCATGCAGC...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGAATTGCGAGACAGAGTaGTTTGGGGAGCCTGGCTTT +
Preference number: 2 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQNCETE*FGEPGF
Trigger: AAAGCCAGGCTCCCCAAAGCACTCTGTCTCGCAATT...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CCA 90 bp GGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTCTGAGCTTCGTTTTCTAGGTTaGGTTTTCATATGCATGTAC +
Preference number: 2 (lower is better)
Translates to: GSSTLLGWLTVSRLMVSELRFLG*VFICMY
Trigger: GTACATGCATATGAAAACCCAACCTAGAAAACGAAG...CTCAGACACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
3UTR-3UTR GCA 90 bp ACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGCACGCCAATACATTTTaGAAACGCACAACACGCAGA +
Preference number: 2 (lower is better)
Translates to: TATLQKEQFCAKRPESFLHANTF*KRTTRR
Trigger: TCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTG...CAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTTCAGCTGTGAACATCTaGTGTCTTTTCAGCTCATTA +
Preference number: 2 (lower is better)
Translates to: CPLKSLNSLGIQDLILIASAVNI*CLFSSL
Trigger: TAATGAGCTGAAAAGACAGCAGATGTTCACAGCTGA...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTCTTGGTTTGCAGATTTaGTGGTACGGTGATCTCAAT +
Preference number: 2 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVLGLQI*WYGDLN
Trigger: ATTGAGATCACCGTACCAGCAAATCTGCAAACCAAG...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTCTAGATTGCTGTATTTaGTCTCTCTGGAGATTAACA +
Preference number: 2 (lower is better)
Translates to: CPLKSLNSLGIQDLILIALDCCI*SLWRLT
Trigger: TGTTAATCTCCAGAGAGAGCAAATACAGCAATCTAG...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGTGGAGATTAACAAAGTaGTTGGTTTGCAGATTTGCT +
Preference number: 2 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQWRLTK*LVCRFA
Trigger: AGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR GCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGTGGAGATTAACAAAGTaGTTGGTTTGCAGATTTGCT +
Preference number: 2 (lower is better)
Translates to: SVPIHYCYPSERAILCQTWRLTK*LVCRFA
Trigger: AGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR GCA 72 bp GGCGGGGCAGGGGGCTGCCCATGGTGGTGCACTGTGTaGCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCG +
Preference number: 3 (lower is better)
Translates to: GGAGGCPWWCTV*PTWAEGSGGWP
Trigger: CGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAGTGCACCACCATGGGCAGCCCCCTGCCCCGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618604.4
3UTR CCA 72 bp GGGGGCTGCCCATGGTGGTGCACTGTGTGCCCCACGTaGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGG +
Preference number: 3 (lower is better)
Translates to: GGCPWWCTVCPT*AEGSGGWPWAW
Trigger: CCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAGTGCACCACCATGGGCAGCCCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618604.4
3UTR CCA 72 bp TCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTaGGAACGCGGCCCCGCGGCCCGCAGAGTCAGGCGT +
Preference number: 3 (lower is better)
Translates to: SCRPATAHHAVH*ERGPAARRVRR
Trigger: ACGCCTGACTCTGCGGGCCGCGGGGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCTCCTGGGGCTCCGGTaGGGCCGTGAGGGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: CPGFGVRLATPGRALCGVLLGLR*GREGQR
Trigger: CCTCTGCCCCTCACGGCCCAACCGGAGCCCCAGGAG...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
3UTR CCA 72 bp GGAAGGCAGCGGGGGCTCCGCCGGGCACTCGTCGGCTaGGGTCACACGGGCCACGGTGAGGACACAGGGGTT +
Preference number: 3 (lower is better)
Translates to: GRQRGLRRALVG*GHTGHGEDTGV
Trigger: AACCCCTGTGTCCTCACCGTGGCCCGTGTGACCCCAGCCGACGAGTGCCCGGCGGAGCCCCCGCTGCCTTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR CAA 90 bp GCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGAAGTGCCCCGGGTTaGGTGTGCGGCTGGCGACCC +
Preference number: 3 (lower is better)
Translates to: APGLVCGWRPPGVPCVVCRSAPG*VCGWRP
Trigger: GGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCT...GCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
3UTR-3UTR CAA 90 bp GCTCACTGGACCATGGGAAGGCAGCGGGGGCTCCGCCGGGCACTCGTCGGCTGGAGAAGTGCCCCGGGTTaGGTGTGCGGCTGGCGACCC +
Preference number: 3 (lower is better)
Translates to: AHWTMGRQRGLRRALVGWRSAPG*VCGWRP
Trigger: GGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCT...CCAGCCGACGAGTGCCCGGCGGAGCCCCCGCTGCCTTCCCATGGTCCAGTGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR GCA 72 bp CCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTaGCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTG +
Preference number: 3 (lower is better)
Translates to: PRVWCAAGDPRA*PVWCAGVSGSL
Trigger: CAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
3UTR GCA 72 bp GGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTaGGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTG +
Preference number: 3 (lower is better)
Translates to: GRDGNRSAPGLV*GWRPPGVPCVV
Trigger: CACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
3UTR CCA 72 bp TGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTaGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTA +
Preference number: 3 (lower is better)
Translates to: WCAAGDPRACPV*CAGVSGSLGPL
Trigger: TAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
3UTR CCA 72 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTaGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGG +
Preference number: 3 (lower is better)
Translates to: DGNRSAPGLVCG*RPPGVPCVVCR
Trigger: CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
3UTR CCA 72 bp GAGAGTCATGTGATGCCCTGGCAGCTCACTGGACCATaGGAAGGCAGCGGGGGCTCCGCCGGGCACTCGTCG +
Preference number: 3 (lower is better)
Translates to: ESHVMPWQLTGP*EGSGGSAGHSS
Trigger: CGACGAGTGCCCGGCGGAGCCCCCGCTGCCTTCCCATGGTCCAGTGAGCTGCCAGGGCATCACATGACTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR CAA 90 bp CATGGTGGTGCACTGTGTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTAGGAGGGAAGATGAGTaGGGCATAGTCTGGTGTGGG +
Preference number: 3 (lower is better)
Translates to: HGGALCAPRGPRAAAGGRRREDE*GIVWCG
Trigger: CCCACACCAGACTATGCCCAACTCATCTTCCCTCCT...ACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAGTGCACCACCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618604.4
3UTR GCA 72 bp ACAAAGTATGGCCCGTGGGTGACTCGGGCACAGACCTaGCGCGTGCAGGTCTGGCCCTGGGGAGCGCATGGT +
Preference number: 3 (lower is better)
Translates to: TKYGPWVTRAQT*RVQVWPWGAHG
Trigger: ACCATGCGCTCCCCAGGGCCAGACCTGCACGCGGCAGGTCTGTGCCCGAGTCACCCACGGGCCATACTTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR CCA 72 bp TGGGTGACTCGGGCACAGACCTGCCGCGTGCAGGTCTaGCCCTGGGGAGCGCATGGTGTCACCACAACACAG +
Preference number: 3 (lower is better)
Translates to: WVTRAQTCRVQV*PWGAHGVTTTQ
Trigger: CTGTGTTGTGGTGACACCATGCGCTCCCCAGGGCCAGACCTGCACGCGGCAGGTCTGTGCCCGAGTCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR TCA 72 bp CCGGGCACTCGTCGGCTGGGGTCACACGGGCCACGGTaGGGACACAGGGGTTCTGCTAGCACATGGCTACAT +
Preference number: 3 (lower is better)
Translates to: PGTRRLGSHGPR*GHRGSASTWLH
Trigger: ATGTAGCCATGTGCTAGCAGAACCCCTGTGTCCTCACCGTGGCCCGTGTGACCCCAGCCGACGAGTGCCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR TCA 72 bp GCGTGCTGGATGTGCTGGGGTGGGTGGTGGTGGTGGTaGTGGTGGTACGGGGGAGGGTTCTGCATGTGGCAG +
Preference number: 3 (lower is better)
Translates to: ACWMCWGGWWWW*WWYGGGFCMWQ
Trigger: CTGCCACATGCAGAACCCTCCCCCGTACCACCATCACCACCACCACCACCCACCCCAGCACATCCAGCACGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618604.4
3UTR CCA 72 bp ACTCGGGCACAGACCTGCCGCGTGCAGGTCTGGCCCTaGGGAGCGCATGGTGTCACCACAACACAGAAGCGA +
Preference number: 3 (lower is better)
Translates to: TRAQTCRVQVWP*GAHGVTTTQKR
Trigger: TCGCTTCTGTGTTGTGGTGACACCATGCGCTCCCCAGGGCCAGACCTGCACGCGGCAGGTCTGTGCCCGAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR CAA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCAGGCCTCCTCCCTCTaGTCCTGTGCTCAGCACCCC +
Preference number: 3 (lower is better)
Translates to: KEHTECGGKPREGLSGFQQASSL*SCAQHP
Trigger: GGGGTGCTGAGCACAGGACAAGAGGGAGGAGGCCTG...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR CCA 72 bp CCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTaGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTT +
Preference number: 3 (lower is better)
Translates to: PRTVPQAGSPRL*SLQDGDGEGEF
Trigger: AAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR CCA 72 bp GACCTGCCGCGTGCAGGTCTGGCCCTGGGGAGCGCATaGTGTCACCACAACACAGAAGCGACAAGAGCACAG +
Preference number: 3 (lower is better)
Translates to: DLPRAGLALGSA*CHHNTEATRAQ
Trigger: CTGTGCTCTTGTCGCTTCTGTGTTGTGGTGACACCATGCGCTCCCCAGGGCCAGACCTGCACGCGGCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR TCA 72 bp CTGGGACCCCTACCCAGGCTGTCTACACAATTGTGCTaGTGCCGCTGGGTTTGGCCTTGCTGCTGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: LGPLPRLSTQLC*CRWVWPCCWWG
Trigger: CCCCCACCAGCAGCAAGGCCAAACCCAGCGGCATCAGCACAATTGTGTAGACAGCCTGGGTAGGGGTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618604.4
3UTR CCA 72 bp AGCGACAAGAGCACAGCTGAGAGTCATGTGATGCCCTaGCAGCTCACTGGACCATGGGAAGGCAGCGGGGGC +
Preference number: 3 (lower is better)
Translates to: SDKSTAESHVMP*QLTGPWEGSGG
Trigger: GCCCCCGCTGCCTTCCCATGGTCCAGTGAGCTGCCAGGGCATCACATGACTCTCAGCTGTGCTCTTGTCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR TCA 72 bp CTGAGGGCTTCGGCCTGGTGTGGGTTGGAGGCGGGATaGGGACGTTATGGTGTTGGGGAGACGAGGATGAGA +
Preference number: 3 (lower is better)
Translates to: LRASAWCGLEAG*GRYGVGETRMR
Trigger: TCTCATCCTCGTCTCCCCAACACCATAACGTCCTCATCCCGCCTCCAACCCACACCAGGCCGAAGCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR TCA 72 bp CTCGAAAGGCTGAAACTACAAAGTATGGCCCGTGGGTaGCTCGGGCACAGACCTGCCGCGTGCAGGTCTGGC +
Preference number: 3 (lower is better)
Translates to: LERLKLQSMARG*LGHRPAACRSG
Trigger: GCCAGACCTGCACGCGGCAGGTCTGTGCCCGAGTCACCCACGGGCCATACTTTGTAGTTTCAGCCTTTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR CCA 72 bp GTGGCTCGAAAGGCTGAAACTACAAAGTATGGCCCGTaGGTGACTCGGGCACAGACCTGCCGCGTGCAGGTC +
Preference number: 3 (lower is better)
Translates to: VARKAETTKYGP*VTRAQTCRVQV
Trigger: GACCTGCACGCGGCAGGTCTGTGCCCGAGTCACCCACGGGCCATACTTTGTAGTTTCAGCCTTTCGAGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR CAA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGAACAGCCTCCTCAAAATaGCGAGACAGAGTGCTTTGG +
Preference number: 3 (lower is better)
Translates to: EDSATGWQPEAVELAGWRTASSK*RDRVLW
Trigger: CCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGT...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR TCA 72 bp GAGCACAGCACTGACGGCTGCAGTGGCTCGAAAGGCTaGAACTACAAAGTATGGCCCGTGGGTGACTCGGGC +
Preference number: 3 (lower is better)
Translates to: EHSTDGCSGSKG*NYKVWPVGDSG
Trigger: GCCCGAGTCACCCACGGGCCATACTTTGTAGTTTCAGCCTTTCGAGCCACTGCAGCCGTCAGTGCTGTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR CCA 72 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTaGACCCAATCACACGGTCCCATGCTGTTTCTTTCT +
Preference number: 3 (lower is better)
Translates to: SETPGRFPDSPA*TQSHGPMLFLS
Trigger: AGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp GTGGGTGACTCGGGCACAGACCTGCCGCGTGCAGGTCTGGCCCTGGGGAGCGCAAGATTAACAAAGTGCTaGGTTTGCAGATTTGCTGGT +
Preference number: 3 (lower is better)
Translates to: VGDSGTDLPRAGLALGSARLTKC*VCRFAG
Trigger: ACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCT...TGCGCTCCCCAGGGCCAGACCTGCACGCGGCAGGTCTGTGCCCGAGTCACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR CAA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGAAAAAAGACCCGAGAATaGATGAGTCGGAGACACCAG +
Preference number: 3 (lower is better)
Translates to: EDSATGWQPEAVELAGWRKKTRE*MSRRHQ
Trigger: CTGGTGTCTCCGACTCATCAATTCTCGGGTCTTTTT...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp TCACAGCTGACGCCAGATGACATGCAGCAGTTTAACGCTTCCAGGTCGGAACAGCAGGCCTCCTCCCTCTaGTCCTGTGCTCAGCACCCC +
Preference number: 3 (lower is better)
Translates to: SQLTPDDMQQFNASRSEQQASSL*SCAQHP
Trigger: GGGGTGCTGAGCACAGGACAAGAGGGAGGAGGCCTG...CTGTTCCGACCTGGAAGCGTTAAACTGCTGCATGTCATCTGGCGTCAGCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCACACACCGCCCTGGGTaGCTAAACGCTAAAGTCAAC +
Preference number: 3 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSTHRPG*LNAKVN
Trigger: GTTGACTTTAGCGTTTAGCAACCCAGGGCGGTGTGT...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR CAA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAACAAAGTGCTTGGTTaGCAGATTTGCTGGTACGGT +
Preference number: 3 (lower is better)
Translates to: RTHRGQCHRLAARGCGACNKVLG*QICWYG
Trigger: ACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTT...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGACAGCCTCCTCAAAATaGCGAGACAGAGTGCTTTGG +
Preference number: 3 (lower is better)
Translates to: KEHTECGGKPREGLSGFQTASSK*RDRVLW
Trigger: CCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGT...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGGCAGTTCAACACTACTaGGCTGGCTCACCGTTTCAA +
Preference number: 3 (lower is better)
Translates to: KEHTECGGKPREGLSGFQAVQHY*AGSPFQ
Trigger: TTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGC...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR TCA 72 bp ACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTCTaGGGCCCACCCATCCCTCAGACTGAGGTGAGCAGA +
Preference number: 3 (lower is better)
Translates to: TWLAHRFKADGV*GPPIPQTEVSR
Trigger: TCTGCTCACCTCAGTCTGAGGGATGGGTGGGCCTCAGACACCATCAGCCTTGAAACGGTGAGCCAGCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
3UTR CCA 72 bp GACTGCACACAGAAGGGCGATGCAGATGCATCTGAATaGAGGGCAGGCCTCCTCCCTCTTGTCCTGTGCTCA +
Preference number: 3 (lower is better)
Translates to: DCTQKGDADASE*RAGLLPLVLCS
Trigger: TGAGCACAGGACAAGAGGGAGGAGGCCTGCCCTCCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR CCA 72 bp AGCTGGAGTGGGGGAGGCAGTTCAACACTACTTGGCTaGCTCACCGTTTCAAGGCTGATGGTGTCTGAGGCC +
Preference number: 3 (lower is better)
Translates to: SWSGGGSSTLLG*LTVSRLMVSEA
Trigger: GGCCTCAGACACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCACTCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
3UTR-3UTR CAA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGTCACGCCAATACATTTaGCAAACGCACAACACGCAG +
Preference number: 3 (lower is better)
Translates to: KEHTECGGKPREGLSGFQSRQYI*QTHNTQ
Trigger: CTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGA...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR TCA 72 bp TCAGGTTCGAGAGTGGTTCCTGATGAAAACACTCTCTaGGGGCTTCGGCCTGGTGTGGGTTGGAGGCGGGAT +
Preference number: 3 (lower is better)
Translates to: SGSRVVPDENTL*GLRPGVGWRRD
Trigger: ATCCCGCCTCCAACCCACACCAGGCCGAAGCCCTCAGAGAGTGTTTTCATCAGGAACCACTCTCGAACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR TCA 72 bp GGTGTCACCACAACACAGAAGCGACAAGAGCACAGCTaGGAGTCATGTGATGCCCTGGCAGCTCACTGGACC +
Preference number: 3 (lower is better)
Translates to: GVTTTQKRQEHS*ESCDALAAHWT
Trigger: GGTCCAGTGAGCTGCCAGGGCATCACATGACTCTCAGCTGTGCTCTTGTCGCTTCTGTGTTGTGGTGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR CAA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGAAGATTAACAAAGTGCTaGGTTTGCAGATTTGCTGGT +
Preference number: 3 (lower is better)
Translates to: EDSATGWQPEAVELAGWRRLTKC*VCRFAG
Trigger: ACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCT...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR TCA 72 bp TGCAAACGCACAACACGCAGAGCGCAGCCTCACAGCTaGCGCCAGATGACATGCAGCAGTTTAACGCTTCCA +
Preference number: 3 (lower is better)
Translates to: CKRTTRRAQPHS*RQMTCSSLTLP
Trigger: TGGAAGCGTTAAACTGCTGCATGTCATCTGGCGTCAGCTGTGAGGCTGCGCTCTGCGTGTTGTGCGTTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTTCTAGATTGCTGTATTaGCTCTCTCTGGAGATTAAC +
Preference number: 3 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGSRLLY*LSLEIN
Trigger: GTTAATCTCCAGAGAGAGCAAATACAGCAATCTAGA...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTCAGGCCTCCTCCCTCTaGTCCTGTGCTCAGCACCCC +
Preference number: 3 (lower is better)
Translates to: CPLKSLNSLGIQDLILIAQASSL*SCAQHP
Trigger: GGGGTGCTGAGCACAGGACAAGAGGGAGGAGGCCTG...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAAACCATGGTTTTACATaGATAGAGTCTGTTGCCACT +
Preference number: 3 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGNHGFT*IESVAT
Trigger: AGTGGCAACAGACTCTATCAATGTAAAACCATGGTT...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp CTGGAGTGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGCAGTTCAACACTACTaGGCTGGCTCACCGTTTCAA +
Preference number: 3 (lower is better)
Translates to: LEWGRQFNTTWLAHRFKAAVQHY*AGSPFQ
Trigger: TTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGC...AGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCACTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
3UTR TCA 72 bp TCTCAAAGGTACACAGTGGGGGTGCCAGGCTTCTTGTaGGGGAGGTGTCCCTTGAAGTCTCTGAACAGTCTG +
Preference number: 3 (lower is better)
Translates to: SQRYTVGVPGFL*GRCPLKSLNSL
Trigger: CAGACTGTTCAGAGACTTCAAGGGACACCTCCCTCACAAGAAGCCTGGCACCCCCACTGTGTACCTTTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR TCA 72 bp GACGAGGATGAGAGCTGGTCACTTTCATGTTGGAGATaGACACTTCTGCCGTGTATGGGTGCCCCTCTCGGA +
Preference number: 3 (lower is better)
Translates to: DEDESWSLSCWR*TLLPCMGAPLG
Trigger: TCCGAGAGGGGCACCCATACACGGCAGAAGTGTTCATCTCCAACATGAAAGTGACCAGCTCTCATCCTCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR CCA 72 bp AAACAAACGCACTCCTTTCCTCTCAAAGGTACACAGTaGGGGTGCCAGGCTTCTTGTGAGGGAGGTGTCCCT +
Preference number: 3 (lower is better)
Translates to: KQTHSFPLKGTQ*GCQASCEGGVP
Trigger: AGGGACACCTCCCTCACAAGAAGCCTGGCACCCCCACTGTGTACCTTTGAGAGGAAAGGAGTGCGTTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR CCA 72 bp AAGGAGCCCAGGAGGGAAGATGAGTTGGGCATAGTCTaGTGTGGGCGAGATGGACACTCTCGTGTTGATGTA +
Preference number: 3 (lower is better)
Translates to: KEPRREDELGIV*CGRDGHSRVDV
Trigger: TACATCAACACGAGAGTGTCCATCTCGCCCACACCAGACTATGCCCAACTCATCTTCCCTCCTGGGCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618604.4
3UTR-3UTR CAA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTCTAGATTGCTGTATTaGCTCTCTCTGGAGATTAAC +
Preference number: 3 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSSRLLY*LSLEIN
Trigger: GTTAATCTCCAGAGAGAGCAAATACAGCAATCTAGA...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR TCA 72 bp CTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTaGGCAGACACCAAAGAAATGCCACGCCAATGGGAG +
Preference number: 3 (lower is better)
Translates to: LDPITRSHAVSF*ADTKEMPRQWE
Trigger: CTCCCATTGGCGTGGCATTTCTTTGGTGTCTGCTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR GCA 72 bp TTCATGTTGGAGATGAACACTTCTGCCGTGTATGGGTaGCCCTCTCGGAGGACTCTGAATGAGTGTGCGTCA +
Preference number: 3 (lower is better)
Translates to: FMLEMNTSAVYG*PSRRTLNECAS
Trigger: TGACGCACACTCATTCAGAGTCCTCCGAGAGGGGCACCCATACACGGCAGAAGTGTTCATCTCCAACATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR GCA 72 bp AGAGCTGGTCACTTTCATGTTGGAGATGAACACTTCTaGCGTGTATGGGTGCCCCTCTCGGAGGACTCTGAA +
Preference number: 3 (lower is better)
Translates to: RAGHFHVGDEHF*RVWVPLSEDSE
Trigger: TTCAGAGTCCTCCGAGAGGGGCACCCATACACGGCAGAAGTGTTCATCTCCAACATGAAAGTGACCAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR CCA 72 bp CCAGAGTCACAACAAGTAATGGGGAAACTCATCAGCTaGAGATCTGGGTCTGGCCAACAGGGCAACTTCTGG +
Preference number: 3 (lower is better)
Translates to: PESQQVMGKLIS*RSGSGQQGNFW
Trigger: CCAGAAGTTGCCCTGTTGGCCAGACCCAGATCTCCAGCTGATGAGTTTCCCCATTACTTGTTGTGACTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR CAA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCAAAAAGACCCGAGAATaGATGAGTCGGAGACACCAG +
Preference number: 3 (lower is better)
Translates to: PVALSQHPASAVNICCLFKKTRE*MSRRHQ
Trigger: CTGGTGTCTCCGACTCATCAATTCTCGGGTCTTTTT...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATTCACCCTGCTCAGTGTaGCAATGCTGCCTTGACTAT +
Preference number: 3 (lower is better)
Translates to: DACCVQSRCDCTQKGDADSPCSV*QCCLDY
Trigger: ATAGTCAAGGCAGCATTGCAACACTGAGCAGGGTGA...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR TCA 72 bp AGCTTGCAAATAAAACAGAATGAAACCTCACTAGCCTaGAGGAACACACTGAGTGCGGCGGGAAACCCCGGG +
Preference number: 3 (lower is better)
Translates to: SLQIKQNETSLA*RNTLSAAGNPG
Trigger: CCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAGGTTTCATTCTGTTTTATTTGCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGTCTAGATTGCTGTATTaGCTCTCTCTGGAGATTAAC +
Preference number: 3 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSESRLLY*LSLEIN
Trigger: GTTAATCTCCAGAGAGAGCAAATACAGCAATCTAGA...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR TCA 72 bp TGCCGTGTATGGGTGCCCCTCTCGGAGGACTCTGAATaGGTGTGCGTCAAATCATATGCGCATAAAAGAAAC +
Preference number: 3 (lower is better)
Translates to: CRVWVPLSEDSE*VCVKSYAHKRN
Trigger: GTTTCTTTTATGCGCATATGATTTGACGCACACTCATTCAGAGTCCTCCGAGAGGGGCACCCATACACGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR GCA 72 bp CTTCAACGATGTGTTTACAGTCACGCCAATACATTTTaGAAACGCACAACACGCAGAGCGCAGCCTCACAGC +
Preference number: 3 (lower is better)
Translates to: LQRCVYSHANTF*KRTTRRAQPHS
Trigger: GCTGTGAGGCTGCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATCGTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp GGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGATAATGCAGCAAGTTTaGGGGTTTGTTTTGTCTGTT +
Preference number: 3 (lower is better)
Translates to: GGGSSTLLGWLTVSRLMVIMQQV*GFVLSV
Trigger: AACAGACAAAACAAACCCCAAAACTTGCTGCATTAT...CACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR CAA 90 bp GGACGTTATGGTGTTGGGGAGACGAGGATGAGAGCTGGTCACTTTCATGTTGGACTTGTAAGGTGGGTATaGCTAATGTGGACTGAAACG +
Preference number: 3 (lower is better)
Translates to: GRYGVGETRMRAGHFHVGLVRWV*LMWTET
Trigger: CGTTTCAGTCCACATTAGCAATACCCACCTTACAAG...TCCAACATGAAAGTGACCAGCTCTCATCCTCGTCTCCCCAACACCATAACGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR-3UTR CAA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGAGATTAACAAAGTGCTaGGTTTGCAGATTTGCTGGT +
Preference number: 3 (lower is better)
Translates to: VQSRCDCTQKGDADASEWRLTKC*VCRFAG
Trigger: ACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCT...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp ACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGAAAAAGACCCGAGAATaGATGAGTCGGAGACACCAG +
Preference number: 3 (lower is better)
Translates to: TATLQKEQFCAKRPESFLKKTRE*MSRRHQ
Trigger: CTGGTGTCTCCGACTCATCAATTCTCGGGTCTTTTT...CAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACACAGCCTCCTCAAAATaGCGAGACAGAGTGCTTTGG +
Preference number: 3 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHTASSK*RDRVLW
Trigger: CCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGT...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR TCA 72 bp GGAGCTCCTTGTAAGGTGGGTATTGCTAATGTGGACTaGAACGCCTGCCTTTCACACACAAGTACTACCTAT +
Preference number: 3 (lower is better)
Translates to: GAPCKVGIANVD*NACLSHTSTTY
Trigger: ATAGGTAGTACTTGTGTGTGAAAGGCAGGCGTTTCAGTCCACATTAGCAATACCCACCTTACAAGGAGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR GCA 72 bp CTTTTCAGCTCATTAAGAAAAACAAGAGGCTCCTGCTaGATGCAGTGTGTGAGGGAAAGATCACTGCACTGG +
Preference number: 3 (lower is better)
Translates to: LFSSLRKTRGSC*MQCVRERSLHW
Trigger: CCAGTGCAGTGATCTTTCCCTCACACACTGCATGCAGCAGGAGCCTCTTGTTTTTCTTAATGAGCTGAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR GCA 72 bp GTCCTCAGTCAGTCCAATGTCTTCAAGGAAAGTGAGTaGCCAGAGTCACAACAAGTAATGGGGAAACTCATC +
Preference number: 3 (lower is better)
Translates to: VLSQSNVFKESE*PESQQVMGKLI
Trigger: GATGAGTTTCCCCATTACTTGTTGTGACTCTGGGCACTCACTTTCCTTGAAGACATTGGACTGACTGAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
3UTR CCA 72 bp CTGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTaGTACGGTGATCTCAATGATATGACCGAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: LEINKVLGLQIC*YGDLNDMTEGG
Trigger: CCCACCCTCGGTCATATCATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR CCA 72 bp TGCTGCATGCAGTGTGTGAGGGAAAGATCACTGCACTaGGTGCTGAAGACATTTTTAAGCAAGATGTGCACA +
Preference number: 3 (lower is better)
Translates to: CCMQCVRERSLH*VLKTFLSKMCT
Trigger: TGTGCACATCTTGCTTAAAAATGTCTTCAGCACCCAGTGCAGTGATCTTTCCCTCACACACTGCATGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACTCACGCCAATACATTTaGCAAACGCACAACACGCAG +
Preference number: 3 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHSRQYI*QTHNTQ
Trigger: CTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGA...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp ACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGAGGCTAAACTCTAGATaGCTGTATTTGCTCTCTCTG +
Preference number: 3 (lower is better)
Translates to: TATLQKEQFCAKRPESFLRLNSR*LYLLSL
Trigger: CAGAGAGAGCAAATACAGCAATCTAGAGTTTAGCCT...CAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTAACAAAGTGCTTGGTTaGCAGATTTGCTGGTACGGT +
Preference number: 3 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVNKVLG*QICWYG
Trigger: ACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTT...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR-3UTR CAA 90 bp ACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGTCTTCGTTTTCTAGGTaGGGTTTTCATATGCATGTA +
Preference number: 3 (lower is better)
Translates to: TATLQKEQFCAKRPESFLSSFSR*GFHMHV
Trigger: TACATGCATATGAAAACCCAACCTAGAAAACGAAGA...CAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp GTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCCGTATCCTGGGGCTCCGGTTaGGCCGTGAGGGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: VPHVGRGQRRVAVGMGPVSWGSG*AVRGRG
Trigger: CCCTCTGCCCCTCACGGCCCAACCGGAGCCCCAGGA...TACGGGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR CCA 90 bp CTGTGTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCGCAGGGGGCTGCCCATaGTGGTGCACTGTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LCAPRGPRAAAGGRGHGPAGGCP*WCTVCP
Trigger: GGGGCACACAGTGCACCACCATGGGCAGCCCCCTGC...GGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR GCA 90 bp CCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGCTCCAGCTCCTCGATaGGCCGTCGCCGGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: PRVWCAAGDPRACPVWCAAPAPR*AVAGAP
Trigger: TGGCGCGCCGGCGACGGCGCATCGAGGAGCTGGAGC...TGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648114.1
CDS-3UTR CCA 90 bp CTGTGTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCTCGAGTGCTGCAGCTTaGGCCTCCGCGTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LCAPRGPRAAAGGRGHGPSSAAA*ASACAA
Trigger: AGCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGA...GGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR CCA 90 bp CTGTGTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCTTGGGGGCGCCGCTGTaGGGACCATGCTTGGGACTG +
Preference number: 4 (lower is better)
Translates to: LCAPRGPRAAAGGRGHGPLGAPL*GPCLGL
Trigger: CAGTCCCAAGCATGGTCCCCACAGCGGCGCCCCCAA...GGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR GCA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGCGCGTGCGCTGCTGTTaGCCCGGCGGCCCCGAGTAC +
Preference number: 4 (lower is better)
Translates to: QQKCPGFGVRLATPGRALRVRCC*PGGPEY
Trigger: GTACTCGGGGCCGCCGGGGCAACAGCAGCGCACGCG...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGCTCCAGCGACGGCGTaGTCCGGCAGCTCGTGTCCG +
Preference number: 4 (lower is better)
Translates to: PRVWCAAGDPRACPVWCAAPATA*SGSSCP
Trigger: CGGACACGAGCTGCCGGAGCACGCCGTCGCTGGAGC...TGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCGATCCCGCACTGCTaGGACGCCCTCGCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCAIPHC*DALASR
Trigger: CCGGGAAGCGAGGGCGTCGCAGCAGTGCGGGATCGC...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000648114.1
CDS-3UTR GCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCTCCCCTCTCCTCCTaGCGTCCGGCCACGGCTCAC +
Preference number: 4 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCAPLSS*RPATAH
Trigger: GTGAGCCGTGGCCGGACGGCAGGAGGAGAGGGGAGC...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGCGCGCGCTCACACCGTaGCCAGGAGCGAGCGAGGAC +
Preference number: 4 (lower is better)
Translates to: PGFGVRLATPGRALCGVQRALTP*PGASED
Trigger: GTCCTCGCTCGCTCCTGGGCACGGTGTGAGCGCGCG...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp CTGTGTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCTGTGCGTGCTGGATGTaGTGGGGTGGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LCAPRGPRAAAGGRGHGPCACWM*WGGWWW
Trigger: CCACCACCACCCACCCCAGCACATCCAGCACGCACA...GGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR GCA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGGGCGGGGCAGGGGGCTaGCCATGGTGGTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: CPGFGVRLATPGRALCGVGGAGG*PWWCTV
Trigger: CACAGTGCACCACCATGGGCAGCCCCCTGCCCCGCC...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTCGCGCCAGCAGCTCCTaGTGCGCGGCGACGATCCGG +
Preference number: 4 (lower is better)
Translates to: ATEVPRVWCAAGDPRACPRASSS*CAATIR
Trigger: CCGGATCGTCGCCGCGCAGCAGGAGCTGCTGGCGCG...AGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648114.1
CDS-3UTR CCA 90 bp GCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCGAAACGCCGTCTGGATaGTGCGGGCCGCATGGCGGG +
Preference number: 4 (lower is better)
Translates to: APGLVCGWRPPGVPCVVCETPSG*CGPHGG
Trigger: CCCGCCATGCGGCCCGCACCATCCAGACGGCGTTTC...GCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GCTCACTGGACCATGGGAAGGCAGCGGGGGCTCCGCCGGGCACTCGTCGGCTGGGGTCCGACTCGGTGCTaGACGGCCGGTCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: AHWTMGRQRGLRRALVGWGPTRC*TAGPLP
Trigger: AGGCAGGGGACCGGCCGTCCAGCACCGAGTCGGACC...CCAGCCGACGAGTGCCCGGCGGAGCCCCCGCTGCCTTCCCATGGTCCAGTGAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGGTCCGACTCGGTGCTaGACGGCCGGTCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCGPTRC*TAGPLP
Trigger: AGGCAGGGGACCGGCCGTCCAGCACCGAGTCGGACC...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCGGTCCGACTCGGTGCTaGACGGCCGGTCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPGPTRC*TAGPLP
Trigger: AGGCAGGGGACCGGCCGTCCAGCACCGAGTCGGACC...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGCGCTGCAGCAGGAAGTaGGCCACCCCGACGGGCGTG +
Preference number: 4 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRRCSRK*ATPTGV
Trigger: CACGCCCGTCGGGGTGGCCCACTTCCTGCTGCAGCG...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCCAGCAGCGGGCTGTaGAGGGCCCTGGCACGTAGC +
Preference number: 4 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCASSGL*RALARS
Trigger: GCTACGTGCCAGGGCCCTCCACAGCCCGCTGCTGGC...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCGCTGGGTGGCCCCCATaGGGGCCGTGGTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPAGWPP*GPWWYW
Trigger: CCAGTACCACCACGGCCCCCATGGGGGCCACCCAGC...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGGTTTGGTGTGCGGCTaGCGACCCCCGGGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: ATEVPRVWCAAGDPRACPGLVCG*RPPGVP
Trigger: GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACC...AGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGAGCCCTGTGGGCTCCTaGGGCTCCGGTTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWSPVGS*GSGWAV
Trigger: CACGGCCCAACCGGAGCCCCAGGAGCCCACAGGGCT...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCCGTAACAACACCAGCCCTGTaGGCTCCTGGGGCTCCGGTT +
Preference number: 4 (lower is better)
Translates to: VPHVGRGQRRVAVGMGPVTTPAL*APGAPV
Trigger: AACCGGAGCCCCAGGAGCCCACAGGGCTGGTGTTGT...TACGGGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR CCA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCGGGCACTCGTCGGCTaGGGTCACACGGGCCACGGT +
Preference number: 4 (lower is better)
Translates to: CPGFGVRLATPGRALCGVRALVG*GHTGHG
Trigger: ACCGTGGCCCGTGTGACCCCAGCCGACGAGTGCCCG...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCCCGGAGCCCAGGGGCTaGCCCTGCGTCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAAPEPRG*PCVQRL
Trigger: CAGCCTCTGGACGCAGGGCCAGCCCCTGGGCTCCGG...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR TCA 90 bp CCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGGTGGTGGGCTCGCTaGGGTCACCACACTCAGGGG +
Preference number: 4 (lower is better)
Translates to: PRVWCAAGDPRACPVWCAGWWAR*GHHTQG
Trigger: CCCCTGAGTGTGGTGACCTCAGCGAGCCCACCACCC...TGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp ATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCGCGTGCGCTGCTGTTaGCCCGGCGGCCCCGAGTAC +
Preference number: 4 (lower is better)
Translates to: MATEVPRVWCAAGDPRACRVRCC*PGGPEY
Trigger: GTACTCGGGGCCGCCGGGGCAACAGCAGCGCACGCG...GCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTCGCAGCCGCTGCTCCTaGCGCTCCAGCGACGGCGTG +
Preference number: 4 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCRSRCS*RSSDGV
Trigger: CACGCCGTCGCTGGAGCGGCAGGAGCAGCGGCTGCG...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCGCAGCCGCTGCTCCTaGCGCTCCAGCGACGGCGTG +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPRSRCS*RSSDGV
Trigger: CACGCCGTCGCTGGAGCGGCAGGAGCAGCGGCTGCG...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGGCGTCCACCTCGCTaGTACCTGGGCCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: PRVWCAAGDPRACPVWCAGRPPR*YLGPPW
Trigger: CCAAGGTGGGCCCAGGTAGCAGCGAGGTGGACGCCC...TGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp GCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGGCGACCCCCGGGCGTaGCCTGTGTGGTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: ATEVPRVWCAAGDPRACPGDPRA*PVWCAG
Trigger: ACCTGCACACCACACAGGGCACGCCCGGGGGTCGCC...AGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCATGCCAGTCTCACTGCTaGGGGCCTCGCCCTCGACGC +
Preference number: 4 (lower is better)
Translates to: PRVWCAAGDPRACPVWCACQSHC*GPRPRR
Trigger: GCGTCGAGGGCGAGGCCCCCAGCAGTGAGACTGGCA...TGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGGATCCGGGCTCAGGCTaGAACCGGGCACCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWDPGSG*NRAPRG
Trigger: GCCCCTTGGTGCCCGGTTCCAGCCTGAGCCCGGATC...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGATGGTGCGGGCCGCATaGCGGGTTACCAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: QQKCPGFGVRLATPGRALMVRAA*RVTRRP
Trigger: GGGGCGCCTGGTAACCCGCCATGCGGCCCGCACCAT...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTCCGTGCAGGGCTGTCTaGGGTTCGGTGTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: ATEVPRVWCAAGDPRACPPCRAV*GSVSRA
Trigger: GGCCCGGGACACCGAACCCCAGACAGCCCTGCACGG...AGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GCTGGGTGGCCCCCATGGGGGCCGTGGTGGTACTGGTGTGCGTGCTGGATGTGCCAGGGCCCAGTAGTCTaGGGCTGCGCCCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: AGWPPWGPWWYWCACWMCQGPVV*GCAPSP
Trigger: CGGGCTGGGGGCGCAGCCCCAGACTACTGGGCCCTG...GCACATCCAGCACGCACACCAGTACCACCACGGCCCCCATGGGGGCCACCCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR CCA 90 bp CGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCAGGGCCCAGTAGTCTaGGGCTGCGCCCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: RPPGVPCVVCRCFREPGTQGPVV*GCAPSP
Trigger: CGGGCTGGGGGCGCAGCCCCAGACTACTGGGCCCTG...GGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCTGTGGGGACCATGCTTaGGACTGCCCTGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: APGLVCGWRPPGVPCVVCCGDHA*DCPAAR
Trigger: GCGGGCAGCAGGGCAGTCCCAAGCATGGTCCCCACA...GCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGCGCTGCAGCAGGAAGTaGGCCACCCCGACGGGCGTG +
Preference number: 4 (lower is better)
Translates to: QQKCPGFGVRLATPGRALRCSRK*ATPTGV
Trigger: CACGCCCGTCGGGGTGGCCCACTTCCTGCTGCAGCG...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CTGTGTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCCAGACCAACCGACGGTaGGGCAGAGAGAGCACACAG +
Preference number: 4 (lower is better)
Translates to: LCAPRGPRAAAGGRGHGPQTNRR*GRESTQ
Trigger: CTGTGTGCTCTCTCTGCCCCACCGTCGGTTGGTCTG...GGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR CCA 90 bp GCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCGCGTGCTGGATGTGCTaGGGTGGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: APGLVCGWRPPGVPCVVCACWMC*GGWWWW
Trigger: CCACCACCACCACCCACCCCAGCACATCCAGCACGC...GCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGGCTGGGTGGCCCCCATaGGGGCCGTGGTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: QQKCPGFGVRLATPGRALAGWPP*GPWWYW
Trigger: CCAGTACCACCACGGCCCCCATGGGGGCCACCCAGC...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCGGGGGCTGCCCATGGTaGTGCACTGTGTGCCCCACG +
Preference number: 4 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPGGCPW*CTVCPT
Trigger: CGTGGGGCACACAGTGCACCACCATGGGCAGCCCCC...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGGCAGGGGGCTGCCCATaGTGGTGCACTGTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRAGGCP*WCTVCP
Trigger: GGGGCACACAGTGCACCACCATGGGCAGCCCCCTGC...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCGGTTTGGTGTGCGGCTaGCGACCCCCGGGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPGLVCG*RPPGVP
Trigger: GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACC...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGAGCCCTGTGGGCTCCTaGGGCTCCGGTTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: QQKCPGFGVRLATPGRALSPVGS*GSGWAV
Trigger: CACGGCCCAACCGGAGCCCCAGGAGCCCACAGGGCT...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCCTTGGTCCAGTGCTGTaGGTGGGGGCCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: APGLVCGWRPPGVPCVVCLGPVL*VGASCH
Trigger: GTGGCAGGAGGCCCCCACCCACAGCACTGGACCAAG...GCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR TCA 90 bp CCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAACTCTGCCTCTTGAGTaGCCCCCGCTCCGAGCGGTC +
Preference number: 4 (lower is better)
Translates to: PRVWCAAGDPRACPVWCATLPLE*PPLRAV
Trigger: GACCGCTCGGAGCGGGGGTCACTCAAGAGGCAGAGT...TGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGCTCCGGTTGGGCCGTaGGGGGCAGAGGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: ATEVPRVWCAAGDPRACPAPVGP*GAEGRD
Trigger: ATCTCTCCCCTCTGCCCCTCACGGCCCAACCGGAGC...AGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGAGTATGGCCCGTGGGTaGCTCGGGCACAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWSMARG*LGHRPA
Trigger: GGCAGGTCTGTGCCCGAGTCACCCACGGGCCATACT...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCGCTTGGGCCTCCGCGTaGGCTGCTGTTGCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPAWASA*AAVAPA
Trigger: CGCCGGGGCAACAGCAGCGCACGCGGAGGCCCAAGC...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCGCTTGGGCCTCCGCGTaGGCTGCTGTTGCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: PGVPCVVCRCFREPGTPTAWASA*AAVAPA
Trigger: CGCCGGGGCAACAGCAGCGCACGCGGAGGCCCAAGC...GGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGCGCATCCAGGGCCGGTaGCTCCTCAGTGTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PGFGVRLATPGRALCGVQRIQGR*LLSVQA
Trigger: AGCCTGCACACTGAGGAGGCACCGGCCCTGGATGCG...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCGGACGGCCGGTCCCCTaGCTGCGAGAGGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PGVPCVVCRCFREPGTPTGRPVP*LREGQR
Trigger: CCTCTGCCCCTCTCGCAGGCAGGGGACCGGCCGTCC...GGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCGCAGGTCCGACTCGGTaGTGGACGGCCGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPAGPTR*WTAGPL
Trigger: CAGGGGACCGGCCGTCCAGCACCGAGTCGGACCTGC...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCTCCACCCGCAGCCGCTaGTCCTGCCGCTCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: RPPGVPCVVCRCFREPGTSTRSR*SCRSSD
Trigger: GTCGCTGGAGCGGCAGGAGCAGCGGCTGCGGGTGGA...GGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGAGCAGCGGCAGATaGTCCACCCGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ATEVPRVWCAAGDPRACPVSSGR*STRSRC
Trigger: GCAGCGGCTGCGGGTGGAGCATCTGCCGCTGCTCAC...AGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGGCTGCCCGCCAAGGCTaGGCTCGTAAGCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: CPGFGVRLATPGRALCGVAARQG*ARKHSA
Trigger: GGCAGAGTGCTTACGAGCGCAGCCTTGGCGGGCAGC...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGGCTGCCCGCCAAGGCTaGGCTCGTAAGCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRAARQG*ARKHSA
Trigger: GGCAGAGTGCTTACGAGCGCAGCCTTGGCGGGCAGC...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCGCTGCCCGCCAAGGCTaGGCTCGTAAGCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPAARQG*ARKHSA
Trigger: GGCAGAGTGCTTACGAGCGCAGCCTTGGCGGGCAGC...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGGACCATGCTTGGGACTaGCCTGCTGCCCGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRDHAWD*PAARQG
Trigger: GCCTTGGCGGGCAGCAGGGCAGTCCCAAGCATGGTC...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCCTAGCGATCCCGCACTaGTGCGACGCCCTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPLAIPH*CDALAS
Trigger: GGAAGCGAGGGCGTCGCAGCAGTGCGGGATCGCTAG...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000648114.1
CDS-3UTR GCA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGTACGCGAGGCCCTGCTaGCCAGCACAGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: PGFGVRLATPGRALCGVQYARPC*PAQLQD
Trigger: GTCCTGGAGCTGTGCTGGGCAGCAGGGCCTCGCGTA...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp CTGTGTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCGGGGCTTCCCTCTCTTaGTCCCGAATAAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LCAPRGPRAAAGGRGHGPGASLS*SRIRSP
Trigger: TGGGCTCCTTATTCGGGAGCAAGAGAGGGAAGCCCC...GGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR GCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCGGCGACCCCCGGGCGTaGCCTGTGTGGTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPGDPRA*PVWCAG
Trigger: ACCTGCACACCACACAGGGCACGCCCGGGGGTCGCC...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGCGACGCTTGGTCCAGTaGTGTGGGTGGGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PGFGVRLATPGRALCGVQRRLVQ*CGWGPP
Trigger: AGGAGGCCCCCACCCACAGCACTGGACCAAGCGTCG...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR GCA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCATCCGGGTCAGCTCCTaGAGGTACTCGGCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPIRVSS*RYSAAW
Trigger: CCAGGCGGCCGAGTACCTGCAGGAGCTGACCCGGAT...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648114.1
CDS-3UTR GCA 90 bp CGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCGCCAGCAGCTCCTGCTaGGCGGCGACGATCCGGGTC +
Preference number: 4 (lower is better)
Translates to: RPPGVPCVVCRCFREPGTASSSC*AATIRV
Trigger: GACCCGGATCGTCGCCGCGCAGCAGGAGCTGCTGGC...GGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648114.1
CDS-3UTR CCA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGTCGAGTGCTGCAGCTTaGGCCTCCGCGTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: PGFGVRLATPGRALCGVQSSAAA*ASACAA
Trigger: AGCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGA...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp ATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCATGGTGCGGGCCGCATaGCGGGTTACCAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: MATEVPRVWCAAGDPRACMVRAA*RVTRRP
Trigger: GGGGCGCCTGGTAACCCGCCATGCGGCCCGCACCAT...GCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCGAAACGCCGTCTGGATaGTGCGGGCCGCATGGCGGG +
Preference number: 4 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAAETPSG*CGPHGG
Trigger: CCCGCCATGCGGCCCGCACCATCCAGACGGCGTTTC...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp ATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCGTGCAGGGCTGTCTaGGGTTCGGTGTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: MATEVPRVWCAAGDPRACPCRAV*GSVSRA
Trigger: GGCCCGGGACACCGAACCCCAGACAGCCCTGCACGG...GCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp AGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTCAGGGCCCAGTAGTCTaGGGCTGCGCCCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: RWQQKCPGFGVRLATPGRQGPVV*GCAPSP
Trigger: CGGGCTGGGGGCGCAGCCCCAGACTACTGGGCCCTG...ACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTTGGGGGCGCCGCTGTaGGGACCATGCTTGGGACTG +
Preference number: 4 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWLGAPL*GPCLGL
Trigger: CAGTCCCAAGCATGGTCCCCACAGCGGCGCCCCCAA...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGACTGTGTGCCCCACGTaGGCCGAGGGCAGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: GEMATEVPRVWCAAGDPRTVCPT*AEGSGG
Trigger: CCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAGT...CCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGGGGGCTGCCCATGGTaGTGCACTGTGTGCCCCACG +
Preference number: 4 (lower is better)
Translates to: ATEVPRVWCAAGDPRACPGGCPW*CTVCPT
Trigger: CGTGGGGCACACAGTGCACCACCATGGGCAGCCCCC...AGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGCTGAGGGCTTCGGCCTaGTGTGGGTTGGAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRLRASA*CGLEAG
Trigger: TCCCGCCTCCAACCCACACCAGGCCGAAGCCCTCAG...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGAGCGTGAGCGCTTaGTGGCCTCCTCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PGFGVRLATPGRALCGVQVSVSA*WPPPQP
Trigger: AGGCTGAGGAGGAGGCCATCAAGCGCTCACGCTCAC...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGGGTGGTGGGCTCGCTaGGGTCACCACACTCAGGGG +
Preference number: 4 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCGWWAR*GHHTQG
Trigger: CCCCTGAGTGTGGTGACCTCAGCGAGCCCACCACCC...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTCGTCCTCCAGCTCGGTaGTGGCGTCCGCAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCRPPAR*WRPQSH
Trigger: GTGACTTTGCGGACGCCATCACCGAGCTGGAGGACG...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp CCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGCAGGCTGCGGCAGTTaGGGGCATCGTCGATGGACT +
Preference number: 4 (lower is better)
Translates to: PRVWCAAGDPRACPVWCAAGCGS*GHRRWT
Trigger: AGTCCATCGACGATGCCCTCAACTGCCGCAGCCTGC...TGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGTGGGTGGCTCGATGGTaGGCAGCGGCAGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: PGFGVRLATPGRALCGVQWVARW*AAADAP
Trigger: TGGAGCATCTGCCGCTGCTCACCATCGAGCCACCCA...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCCGTACAAAGCCACGCTCGATaGGGTACTGGACTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VPHVGRGQRRVAVGMGPVQSHAR*GTGLPS
Trigger: AGAAGGGAGTCCAGTACCTCATCGAGCGTGGCTTTG...TACGGGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR TCA 90 bp GTGGGTGACTCGGGCACAGACCTGCCGCGTGCAGGTCTGGCCCTGGGGAGCGCAGAGCTTCGCCCTTTCTaGAAGGGCCTCCGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VGDSGTDLPRAGLALGSAELRPF*KGLRLG
Trigger: GCCCAGGCGGAGGCCCTTTCAGAAAGGGCGAAGCTC...TGCGCTCCCCAGGGCCAGACCTGCACGCGGCAGGTCTGTGCCCGAGTCACCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp CCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCACCTGAAGGAACACACTaGGTGCGGCGGGAAACCCCG +
Preference number: 4 (lower is better)
Translates to: PRVWCAAGDPRACPVWCAPEGTH*VRRETP
Trigger: CGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGG...TGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGACCCATCCCTCAGACTaGGGTGAGCAGAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWTHPSD*GEQSPG
Trigger: CCCTGGGCTCTGCTCACCTCAGTCTGAGGGATGGGT...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR GCA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCATGGAGGTCGAGTGCTaGAGCTTGGGCCTCCGCGTG +
Preference number: 4 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPMEVEC*SLGLRV
Trigger: CACGCGGAGGCCCAAGCTGCAGCACTCGACCTCCAT...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGGGTGCCTCCTCAGTGTaGAGGCTGCGGCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRGASSV*RLRQLR
Trigger: CCTCAACTGCCGCAGCCTGCACACTGAGGAGGCACC...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGGTTTGCGGTGGTCCATaGCGTGCAGGGCTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWVCGGP*RAGLSG
Trigger: CCCAGACAGCCCTGCACGGCATGGACCACCGCAAAC...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGTCCACCCGCAGCCGCTaGTCCTGCCGCTCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: ERWQQKCPGFGVRLATPGSTRSR*SCRSSD
Trigger: GTCGCTGGAGCGGCAGGAGCAGCGGCTGCGGGTGGA...CCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCGTGAGCAGCGGCAGATaGTCCACCCGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RPPGVPCVVCRCFREPGTVSSGR*STRSRC
Trigger: GCAGCGGCTGCGGGTGGAGCATCTGCCGCTGCTCAC...GGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GCTGGGTGGCCCCCATGGGGGCCGTGGTGGTACTGGTGTGCGTGCTGGATGTGCTGCTTGGGACTGCCCTaGTGCCCGCCAAGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: AGWPPWGPWWYWCACWMCCLGLP*CPPRLR
Trigger: GCGCAGCCTTGGCGGGCAGCAGGGCAGTCCCAAGCA...GCACATCCAGCACGCACACCAGTACCACCACGGCCCCCATGGGGGCCACCCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR GCA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGTGCTTGGGACTGCCCTaGTGCCCGCCAAGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVCLGLP*CPPRLR
Trigger: GCGCAGCCTTGGCGGGCAGCAGGGCAGTCCCAAGCA...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGACCATGCTTGGGACTaGCCTGCTGCCCGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: ATEVPRVWCAAGDPRACPDHAWD*PAARQG
Trigger: GCCTTGGCGGGCAGCAGGGCAGTCCCAAGCATGGTC...AGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTTGCTTGCTGAGCGTCTaGTCCCGCAGGCTGTCACGG +
Preference number: 4 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCCLLSV*SRRLSR
Trigger: CCGTGACAGCCTGCGGGAGCAGACGCTCAGCAAGCA...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGGCGAGTCCCAGCTGTTaGGGGCCTCCTTGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWASPSC*GPPCGR
Trigger: CCTACCACAAGGAGGCCCGCAACAGCTGGGACTCGC...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CATGGTGGTGCACTGTGTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTCAGCCGAGCCCGGGATaGAGGGATCCGATCGGCTTT +
Preference number: 4 (lower is better)
Translates to: HGGALCAPRGPRAAAGGRQPSPG*RDPIGF
Trigger: AAAGCCGATCGGATCCCTGCATCCCGGGCTCGGCTG...ACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAGTGCACCACCATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR GCA 90 bp GCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTCTAGCGATCCCGCACTaGTGCGACGCCCTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: ATEVPRVWCAAGDPRACPLAIPH*CDALAS
Trigger: GGAAGCGAGGGCGTCGCAGCAGTGCGGGATCGCTAG...AGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000648114.1
CDS-3UTR GCA 90 bp GGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGGCGGGGCAGGGGGCTaGCCATGGTGGTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: GEMATEVPRVWCAAGDPRGGAGG*PWWCTV
Trigger: CACAGTGCACCACCATGGGCAGCCCCCTGCCCCGCC...CCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTAGGAGTTTTGCAAAGTaGCGGCCGCGGCGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCRSFAK*RPRRGK
Trigger: CTTCCCGCGCCGCGGCCGGCACTTTGCAAAACTCCT...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648114.1
CDS-3UTR CCA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGAAACGCCGTCTGGATaGTGCGGGCCGCATGGCGGG +
Preference number: 4 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCETPSG*CGPHGG
Trigger: CCCGCCATGCGGCCCGCACCATCCAGACGGCGTTTC...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGCCGTGCAGGGCTGTCTaGGGTTCGGTGTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GRDGNRSAPGLVCGWRPPPCRAV*GSVSRA
Trigger: GGCCCGGGACACCGAACCCCAGACAGCCCTGCACGG...CGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCTCGTCCAGTTTGCGGTaGTCCATGCCGTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: APGLVCGWRPPGVPCVVCSSSLR*SMPCRA
Trigger: AGCCCTGCACGGCATGGACCACCGCAAACTGGACGA...GCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGACAGGGCCCAGTAGTCTaGGGCTGCGCCCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: EDSATGWQPEAVELAGWRQGPVV*GCAPSP
Trigger: CGGGCTGGGGGCGCAGCCCCAGACTACTGGGCCCTG...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGAGAGCTGTCGCTGGGTaGCTCGATGGTGAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: PGFGVRLATPGRALCGVQRAVAG*LDGEQR
Trigger: CCGCTGCTCACCATCGAGCCACCCAGCGACAGCTCT...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGGGACCATGCTTaGGACTGCCCTGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: QQKCPGFGVRLATPGRALCGDHA*DCPAAR
Trigger: GCGGGCAGCAGGGCAGTCCCAAGCATGGTCCCCACA...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGCCATTGATGGCCAAGTaGCTGTCCAGGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRPLMAK*LSRGLG
Trigger: CCCCAGGCCCCTGGACAGCCACTTGGCCATCAATGG...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCTGTGATGCCCGTGCATaGCGGCCTGCGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPCDARA*RPAAAP
Trigger: AGGGGCTGCCGCAGGCCGCCATGCACGGGCATCACA...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp ATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCGAAGTGCCCCGGGTTTaGTGTGCGGCTGGCGACCCC +
Preference number: 4 (lower is better)
Translates to: MATEVPRVWCAAGDPRACEVPRV*CAAGDP
Trigger: GGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC...GCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGCAGAGGGGAGAGATaGCAACAGAAGTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: PRVWCAAGDPRACPVWCAGRGER*QQKCPG
Trigger: CCCGGGGCACTTCTGTTGCCATCTCTCCCCTCTGCC...TGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGTCCTGGGGCTCCGGTTaGGCCGTGAGGGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: ERWQQKCPGFGVRLATPGSWGSG*AVRGRG
Trigger: CCCTCTGCCCCTCACGGCCCAACCGGAGCCCCAGGA...CCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGAGCCCTGTGGGCTCCTaGGGCTCCGGTTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: GEMATEVPRVWCAAGDPRSPVGS*GSGWAV
Trigger: CACGGCCCAACCGGAGCCCCAGGAGCCCACAGGGCT...CCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCACAACACCAGCCCTGTaGGCTCCTGGGGCTCCGGTT +
Preference number: 4 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPTTPAL*APGAPV
Trigger: AACCGGAGCCCCAGGAGCCCACAGGGCTGGTGTTGT...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGACAACACCAGCCCTGTaGGCTCCTGGGGCTCCGGTT +
Preference number: 4 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWTTPAL*APGAPV
Trigger: AACCGGAGCCCCAGGAGCCCACAGGGCTGGTGTTGT...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCGTCCAGTGCTGTGGGTaGGGGCCTCCTGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPVQCCG*GPPATN
Trigger: GTTTGTGGCAGGAGGCCCCCACCCACAGCACTGGAC...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR TCA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGGTGAGCGTGAGCGCTTaGTGGCCTCCTCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: QQKCPGFGVRLATPGRALVSVSA*WPPPQP
Trigger: AGGCTGAGGAGGAGGCCATCAAGCGCTCACGCTCAC...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCACTCTGCCTCTTGAGTaGCCCCCGCTCCGAGCGGTC +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPTLPLE*PPLRAV
Trigger: GACCGCTCGGAGCGGGGGTCACTCAAGAGGCAGAGT...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCGGTTGGCTGAGCCATTaGTGGCCAAGTGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: APGLVCGWRPPGVPCVVCGWLSH*WPSGCP
Trigger: TGGACAGCCACTTGGCCATCAATGGCTCAGCCAACC...GCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGGCTCTGCCGGTTGGCTaGGCCATTGATGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: CPGFGVRLATPGRALCGVALPVG*AIDGQV
Trigger: CACTTGGCCATCAATGGCTCAGCCAACCGGCAGAGC...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGGCGCCTGGAATTTCCTaGGGGCCTCATCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: CPGFGVRLATPGRALCGVAPGIS*GPHPAP
Trigger: TGGAGCTGGATGAGGCCCTCAGGAAATTCCAGGCGC...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTCGGGGACAGACGAGGTaGGCCGGATGCCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCRGQTR*AGCHWG
Trigger: ACCCCAATGGCATCCGGCTCACCTCGTCTGTCCCCG...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCGGGGACAGACGAGGTaGGCCGGATGCCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVRGQTR*AGCHWG
Trigger: ACCCCAATGGCATCCGGCTCACCTCGTCTGTCCCCG...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGGCCAGCCAGCCAAGGTaGCACACAGCCAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: ERWQQKCPGFGVRLATPGASQPR*HTARGG
Trigger: GCCCCCTCTGGCTGTGTGTCACCTTGGCTGGCTGGC...CCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp GCTCACTGGACCATGGGAAGGCAGCGGGGGCTCCGCCGGGCACTCGTCGGCTGGAGCTTCCCGTGGCGCTaGGTCAACACCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: AHWTMGRQRGLRRALVGWSFPWR*VNTQHQ
Trigger: CTGATGCTGGGTGTTGACTCAGCGCCACGGGAAGCT...CCAGCCGACGAGTGCCCGGCGGAGCCCCCGCTGCCTTCCCATGGTCCAGTGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGACAGAGTGCTGCAAGTaGGGCAGGACCACCGGTGGG +
Preference number: 4 (lower is better)
Translates to: QQKCPGFGVRLATPGRALTECCK*GRTTGG
Trigger: CCCACCGGTGGTCCTGCCTCACTTGCAGCACTCTGT...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGTGGCAGTACTGGGTGTaGTGCCCGTGCATGGCGGCC +
Preference number: 4 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVWQYWV*CPCMAA
Trigger: GGCCGCCATGCACGGGCATCACACCCAGTACTGCCA...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp ATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCTGGCAGTACTGGGTGTaGTGCCCGTGCATGGCGGCC +
Preference number: 4 (lower is better)
Translates to: MATEVPRVWCAAGDPRACWQYWV*CPCMAA
Trigger: GGCCGCCATGCACGGGCATCACACCCAGTACTGCCA...GCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGAGGATGGAGGTCGAGTaGTGCAGCTTGGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: QQKCPGFGVRLATPGRALRMEVE*CSLGLR
Trigger: GCGGAGGCCCAAGCTGCAGCACTCGACCTCCATCCT...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTCCTCCTCAGCCTGCTTaGGCAGGATGGAGGTCGAGT +
Preference number: 4 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCPPQPA*AGWRSS
Trigger: ACTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGG...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCACGCCGTCTGGATGGTaGGGGCCGCATGGCGGGTTA +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPTPSGW*GPHGGL
Trigger: TAACCCGCCATGCGGCCCGCACCATCCAGACGGCGT...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCCGTATCTCTGACATGGAGCTaGGCAAGCGCTCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: VPHVGRGQRRVAVGMGPVSLTWS*ASARSS
Trigger: AGAACTTCGAGCGCTTGCGCAGCTCCATGTCAGAGA...TACGGGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR GCA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCGCATCCAGGGCCGGTaGCTCCTCAGTGTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVRIQGR*LLSVQA
Trigger: AGCCTGCACACTGAGGAGGCACCGGCCCTGGATGCG...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTCGCAGCCGCTGCTCCTaGCGCTCCAGCGACGGCGTG +
Preference number: 4 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGRSRCS*RSSDGV
Trigger: CACGCCGTCGCTGGAGCGGCAGGAGCAGCGGCTGCG...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTTGCTTGCTGAGCGTCTaGTCCCGCAGGCTGTCACGG +
Preference number: 4 (lower is better)
Translates to: ATEVPRVWCAAGDPRACPCLLSV*SRRLSR
Trigger: CCGTGACAGCCTGCGGGAGCAGACGCTCAGCAAGCA...AGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCGCGAGTCCCAGCTGTTaGGGGCCTCCTTGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAAASPSC*GPPCGR
Trigger: CCTACCACAAGGAGGCCCGCAACAGCTGGGACTCGC...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGGCGAGTCCCAGCTGTTaGGGGCCTCCTTGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: QQKCPGFGVRLATPGRALASPSC*GPPCGR
Trigger: CCTACCACAAGGAGGCCCGCAACAGCTGGGACTCGC...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGTCTGGGTTCCGGAATTaGCGCACCACCCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: PGFGVRLATPGRALCGVQSGFRN*RTTPGL
Trigger: CAACCCTGGGGTGGTGCGGCAATTCCGGAACCCAGA...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CTGTGTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCTCGAAGAGCAGGACCTaGATGCCGTACAAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LCAPRGPRAAAGGRGHGPSKSRT*MPYKEK
Trigger: CTTCTCCTTGTACGGCATGCAGGTCCTGCTCTTCGA...GGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR GCA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGCTCCCTCTTGTCCTGTaGTCAGCACCCCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRLPLVL*SAPPPH
Trigger: GTGAGGTGGGGGTGCTGAGCACAGGACAAGAGGGAG...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGTGGTGGTACTGGTGTaGGTGCTGGATGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCVVVLV*VLDVLG
Trigger: CCCCAGCACATCCAGCACGCACACCAGTACCACCAC...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCGATCCGGGCTCAGGCTaGAACCGGGCACCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: PGVPCVVCRCFREPGTPTDPGSG*NRAPRG
Trigger: GCCCCTTGGTGCCCGGTTCCAGCCTGAGCCCGGATC...GGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGCCTGCTTGCGCAGGATaGAGGTCGAGTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PGFGVRLATPGRALCGVQPACAG*RSSAAA
Trigger: AGCTGCAGCACTCGACCTCCATCCTGCGCAAGCAGG...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCTGGCGAAACGCCGTCTaGATGGTGCGGGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: RPPGVPCVVCRCFREPGTWRNAV*MVRAAW
Trigger: CCATGCGGCCCGCACCATCCAGACGGCGTTTCGCCA...GGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CTGTGTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCACTGCATCCTCATGTTaGACAGCACAATCCGGCGTG +
Preference number: 4 (lower is better)
Translates to: LCAPRGPRAAAGGRGHGPTASSC*TAQSGV
Trigger: CACGCCGGATTGTGCTGTCCAACATGAGGATGCAGT...GGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR CCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTACCAGGGCTCCCAGCTaGGAGCCGTCGTTAGTCACT +
Preference number: 4 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCTRAPS*EPSLVT
Trigger: AGTGACTAACGACGGCTCCCAGCTGGGAGCCCTGGT...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGAGCACTGGGACATGCTaGGCCGCACGACGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: CPGFGVRLATPGRALCGVSTGTC*AARRLS
Trigger: AGAAAGGCGTCGTGCGGCCCAGCATGTCCCAGTGCT...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCATACCTGGGCCCACCTTaGGGTTTTTCCCTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: PRVWCAAGDPRACPVWCAYLGPP*GFSLPS
Trigger: GGACGGGAGGGAAAAACCCCAAGGTGGGCCCAGGTA...TGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCTGTGATGCCCGTGCATaGCGGCCTGCGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPCDARA*RPAAAP
Trigger: AGGGGCTGCCGCAGGCCGCCATGCACGGGCATCACA...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp AGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTTGTGATGCCCGTGCATaGCGGCCTGCGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RWQQKCPGFGVRLATPGRCDARA*RPAAAP
Trigger: AGGGGCTGCCGCAGGCCGCCATGCACGGGCATCACA...ACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCACTGTGTGCCCCACGTaGGCCGAGGGCAGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATTVCPT*AEGSGG
Trigger: CCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAGT...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCGCAGGGGGCTGCCCATaGTGGTGCACTGTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPAGGCP*WCTVCP
Trigger: GGGGCACACAGTGCACCACCATGGGCAGCCCCCTGC...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGGCAGAGGGGAGAGATaGCAACAGAAGTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: ATEVPRVWCAAGDPRACPGRGER*QQKCPG
Trigger: CCCGGGGCACTTCTGTTGCCATCTCTCCCCTCTGCC...AGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTCTCGCCCTCGACGCTTaGTCCAGTGCTGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCLALDA*SSAVGG
Trigger: CCCACCCACAGCACTGGACCAAGCGTCGAGGGCGAG...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR CCA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCTCACTCAGGGCGGGATaGGTGAGGGGCGTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: RTHRGQCHRLAARGCGACSLRAG*VRGVRR
Trigger: CCGGCGGACGCCCCTCACCCATCCCGCCCTGAGTGA...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR TCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTCCCATAGGCTCCCACTaGCGTGTGCTCGTAGTGATC +
Preference number: 4 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCPIGSH*RVLVVI
Trigger: GATCACTACGAGCACACGTCAGTGGGAGCCTATGGG...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp ATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCGTGAGCGTGAGCGCTTaGTGGCCTCCTCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: MATEVPRVWCAAGDPRACVSVSA*WPPPQP
Trigger: AGGCTGAGGAGGAGGCCATCAAGCGCTCACGCTCAC...GCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGGCCGTCGTTAGTCACTaGGACCTGCTTCCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWAVVSH*DLLPLE
Trigger: TTCGAGGGGAAGCAGGTCTCAGTGACTAACGACGGC...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCGGGTGGTGGGCTCGCTaGGGTCACCACACTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RTHRGQCHRLAARGCGACGWWAR*GHHTQG
Trigger: CCCCTGAGTGTGGTGACCTCAGCGAGCCCACCACCC...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCGTCCTCCAGCTCGGTaGTGGCGTCCGCAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVRPPAR*WRPQSH
Trigger: GTGACTTTGCGGACGCCATCACCGAGCTGGAGGACG...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCAAGCACTCTGCCTCTTaGGTGACCCCCGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPKHSAS*VTPAPS
Trigger: GCTCGGAGCGGGGGTCACTCAAGAGGCAGAGTGCTT...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGGTTGGCTGAGCCATTaGTGGCCAAGTGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCGWLSH*WPSGCP
Trigger: TGGACAGCCACTTGGCCATCAATGGCTCAGCCAACC...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGGCTCTGCCGGTTGGCTaGGCCATTGATGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: QQKCPGFGVRLATPGRALALPVG*AIDGQV
Trigger: CACTTGGCCATCAATGGCTCAGCCAACCGGCAGAGC...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCGGTAGGTCTGCTTGCTaGGCGTCTGCTCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPGRSAC*ASAPAG
Trigger: GCCTGCGGGAGCAGACGCTCAGCAAGCAGACCTACC...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGGGGACAGACGAGGTaGGCCGGATGCCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: ERWQQKCPGFGVRLATPGRGQTR*AGCHWG
Trigger: ACCCCAATGGCATCCGGCTCACCTCGTCTGTCCCCG...CCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GCTCACTGGACCATGGGAAGGCAGCGGGGGCTCCGCCGGGCACTCGTCGGCTGGCGATGCAGATGCATCTaGATGGAGGGCAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: AHWTMGRQRGLRRALVGWRCRCI*MEGRPP
Trigger: AGGAGGCCTGCCCTCCATTCAGATGCATCTGCATCG...CCAGCCGACGAGTGCCCGGCGGAGCCCCCGCTGCCTTCCCATGGTCCAGTGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp GCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCTGTGCAGTCTCGATGTaGCTGCACACAGAAGGGCGA +
Preference number: 4 (lower is better)
Translates to: APGLVCGWRPPGVPCVVCCAVSM*LHTEGR
Trigger: TCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACA...GCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp GGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGTGGCAGTACTGGGTGTaGTGCCCGTGCATGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GRDGNRSAPGLVCGWRPPWQYWV*CPCMAA
Trigger: GGCCGCCATGCACGGGCATCACACCCAGTACTGCCA...CGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GCTGGGTGGCCCCCATGGGGGCCGTGGTGGTACTGGTGTGCGTGCTGGATGTGCTCCCTCAGACTGAGGTaGGCAGAGCCCAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: AGWPPWGPWWYWCACWMCSLRLR*AEPRVP
Trigger: TGGCACCCTGGGCTCTGCTCACCTCAGTCTGAGGGA...GCACATCCAGCACGCACACCAGTACCACCACGGCCCCCATGGGGGCCACCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR TCA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTCACCGTTTCAAGGCTaGTGGTGTCTGAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRSPFQG*WCLRPT
Trigger: GGTGGGCCTCAGACACCATCAGCCTTGAAACGGTGA...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR TCA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGGGGTTGGAGGCGGGATaGGGACGTTATGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: QQKCPGFGVRLATPGRALGLEAG*GRYGVG
Trigger: CCCAACACCATAACGTCCTCATCCCGCCTCCAACCC...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGATGGAGGTCGAGTGCTaGAGCTTGGGCCTCCGCGTG +
Preference number: 4 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVMEVEC*SLGLRV
Trigger: CACGCGGAGGCCCAAGCTGCAGCACTCGACCTCCAT...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTAGGATGGAGGTCGAGTaGTGCAGCTTGGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCRMEVE*CSLGLR
Trigger: GCGGAGGCCCAAGCTGCAGCACTCGACCTCCATCCT...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCGGTGCCTCCTCAGTGTaGAGGCTGCGGCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPGASSV*RLRQLR
Trigger: CCTCAACTGCCGCAGCCTGCACACTGAGGAGGCACC...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCGGTGGTCCATGCCGTaGAGGGCTGTCTGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: PGVPCVVCRCFREPGTPTRWSMP*RAVWGS
Trigger: CGAACCCCAGACAGCCCTGCACGGCATGGACCACCG...GGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCGGACGGCCGGTCCCCTaGCTGCGAGAGGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSGRPVP*LREGQR
Trigger: CCTCTGCCCCTCTCGCAGGCAGGGGACCGGCCGTCC...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCTGCTTGGGACTGCCCTaGTGCCCGCCAAGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: RTHRGQCHRLAARGCGACCLGLP*CPPRLR
Trigger: GCGCAGCCTTGGCGGGCAGCAGGGCAGTCCCAAGCA...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGGACCATGCTTGGGACTaGCCTGCTGCCCGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: ERWQQKCPGFGVRLATPGDHAWD*PAARQG
Trigger: GCCTTGGCGGGCAGCAGGGCAGTCCCAAGCATGGTC...CCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGAGTCCGACTCAGACTTaGTCTGCCGGTTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: CPGFGVRLATPGRALCGVSPTQT*SAGWLS
Trigger: GCTCAGCCAACCGGCAGAGCAAGTCTGAGTCGGACT...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTTCTGGGTTCCGGAATTaGCGCACCACCCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: ATEVPRVWCAAGDPRACPSGFRN*RTTPGL
Trigger: CAACCCTGGGGTGGTGCGGCAATTCCGGAACCCAGA...AGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCACCCCCACCTCACCCTaGTCAGTGTTGCAATGCTGC +
Preference number: 4 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPTPTSP*SVLQCC
Trigger: GCAGCATTGCAACACTGAGCAGGGTGAGGTGGGGGT...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCGGGGCTTCCCTCTCTTaGTCCCGAATAAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPGASLS*SRIRSP
Trigger: TGGGCTCCTTATTCGGGAGCAAGAGAGGGAAGCCCC...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCTGGTACTGGTGTGCGTaGTGGATGTGCTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAAWYWCA*WMCWGG
Trigger: CCCACCCCAGCACATCCAGCACGCACACCAGTACCA...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCGGCGGGGCAGGGGGCTaGCCATGGTGGTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATGGAGG*PWWCTV
Trigger: CACAGTGCACCACCATGGGCAGCCCCCTGCCCCGCC...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCGGCGACCCCCGGGCGTaGCCTGTGTGGTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATGDPRA*PVWCAG
Trigger: ACCTGCACACCACACAGGGCACGCCCGGGGGTCGCC...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGAGATGGCAACAGAAGTaGCCCGGGTTTGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: PGFGVRLATPGRALCGVQRWQQK*PGFGVR
Trigger: CCGCACACCAAACCCGGGGCACTTCTGTTGCCATCT...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGGCAGGCGAGGAGTTTTaGAAAGTGCCGGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: ERWQQKCPGFGVRLATPGAGEEF*KVPAAA
Trigger: CGCCGCGGCCGGCACTTTGCAAAACTCCTCGCCTGC...CCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000648114.1
CDS-3UTR CCA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCTGGCGAAACGCCGTCTaGATGGTGCGGGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPWRNAV*MVRAAW
Trigger: CCATGCGGCCCGCACCATCCAGACGGCGTTTCGCCA...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCAGCCGTGCAGGGCTGTCTaGGGTTCGGTGTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: EHTECGGKPREGLSGFQQPCRAV*GSVSRA
Trigger: GGCCCGGGACACCGAACCCCAGACAGCCCTGCACGG...CTGCTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTGGTCCGACTCGGTGCTaGACGGCCGGTCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGGPTRC*TAGPLP
Trigger: AGGCAGGGGACCGGCCGTCCAGCACCGAGTCGGACC...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCTTGGGGGCGCCGCTGTaGGGACCATGCTTGGGACTG +
Preference number: 4 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPLGAPL*GPCLGL
Trigger: CAGTCCCAAGCATGGTCCCCACAGCGGCGCCCCCAA...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCCATTGATGGCCAAGTaGCTGTCCAGGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPPLMAK*LSRGLG
Trigger: CCCCAGGCCCCTGGACAGCCACTTGGCCATCAATGG...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCTTGGACTTCCGCAATaGACTCCCGCAGGTCATCGG +
Preference number: 4 (lower is better)
Translates to: CPGFGVRLATPGRALCGVLGLPQ*TPAGHR
Trigger: CCGATGACCTGCGGGAGTCCATTGCGGAAGTCCAAG...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGCACCACGCTGTCCACTaGGAACGCGGCCCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: AARGCGACRMAMERESFLHHAVH*ERGPAA
Trigger: GGCCGCGGGGCCGCGTTCCCAGTGGACAGCGTGGTG...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGGGCAGCCCGAGGCTGTaGAGCTTGCAGGATGGCGAT +
Preference number: 4 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVGSPRL*SLQDGD
Trigger: ATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCC...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp GGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCTGGATGTGCTaGGGTGGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GEMATEVPRVWCAAGDPRACWMC*GGWWWW
Trigger: CCACCACCACCACCCACCCCAGCACATCCAGCACGC...CCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCCGTATCAACACTACTTGGCTaGCTCACCGTTTCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: VPHVGRGQRRVAVGMGPVSTLLG*LTVSRL
Trigger: CAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGA...TACGGGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR CCA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGCACTTCTGCCGTGTATaGGTGCCCCTCTCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: QQKCPGFGVRLATPGRALHFCRV*VPLSED
Trigger: GTCCTCCGAGAGGGGCACCCATACACGGCAGAAGTG...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCCCTGGGGAGCGCATaGTGTCACCACAACACAGAA +
Preference number: 4 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCALGSA*CHHNTE
Trigger: TTCTGTGTTGTGGTGACACCATGCGCTCCCCAGGGC...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGACAAAGTATGGCCCGTaGGTGACTCGGGCACAGACC +
Preference number: 4 (lower is better)
Translates to: PGFGVRLATPGRALCGVQTKYGP*VTRAQT
Trigger: GGTCTGTGCCCGAGTCACCCACGGGCCATACTTTGT...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp CCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCTCAGCCGCGCCACTTaGCGCTCCAGCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: PGVPCVVCRCFREPGTPTLSRAT*RSSSSM
Trigger: CATCGAGGAGCTGGAGCGCCAAGTGGCGCGGCTGAG...GGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648114.1
CDS-3UTR TCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCCCCATAGGCTCCCACTaGCGTGTGCTCGTAGTGATC +
Preference number: 4 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAAPIGSH*RVLVVI
Trigger: GATCACTACGAGCACACGTCAGTGGGAGCCTATGGG...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCGCCGTCGTTAGTCACTaGGACCTGCTTCCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAAAVVSH*DLLPLE
Trigger: TTCGAGGGGAAGCAGGTCTCAGTGACTAACGACGGC...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCGCAGGCTGCGGCAGTTaGGGGCATCGTCGATGGACT +
Preference number: 4 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPAGCGS*GHRRWT
Trigger: AGTCCATCGACGATGCCCTCAACTGCCGCAGCCTGC...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GCTCACTGGACCATGGGAAGGCAGCGGGGGCTCCGCCGGGCACTCGTCGGCTGGCATCGATGTACAGGGTaGCATCACTGTACGAGGCCG +
Preference number: 4 (lower is better)
Translates to: AHWTMGRQRGLRRALVGWHRCTG*HHCTRP
Trigger: CGGCCTCGTACAGTGATGTCACCCTGTACATCGATG...CCAGCCGACGAGTGCCCGGCGGAGCCCCCGCTGCCTTCCCATGGTCCAGTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCATCGATGTACAGGGTaGCATCACTGTACGAGGCCG +
Preference number: 4 (lower is better)
Translates to: CPGFGVRLATPGRALCGVHRCTG*HHCTRP
Trigger: CGGCCTCGTACAGTGATGTCACCCTGTACATCGATG...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGTGGGTGGCTCGATGGTaGGCAGCGGCAGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: GEMATEVPRVWCAAGDPRWVARW*AAADAP
Trigger: TGGAGCATCTGCCGCTGCTCACCATCGAGCCACCCA...CCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGTGGGTGGCTCGATGGTaGGCAGCGGCAGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: GRDGNRSAPGLVCGWRPPWVARW*AAADAP
Trigger: TGGAGCATCTGCCGCTGCTCACCATCGAGCCACCCA...CGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGAAGCACTCTGCCTCTTaGGTGACCCCCGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: ERWQQKCPGFGVRLATPGKHSAS*VTPAPS
Trigger: GCTCGGAGCGGGGGTCACTCAAGAGGCAGAGTGCTT...CCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCTCTCAGGCTTCTTGTTaGAGAGGTTCAGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: APGLVCGWRPPGVPCVVCSQASC*RGSGRC
Trigger: GCATCGGCCTGAACCTCTTCAACAAGAAGCCTGAGA...GCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAATTTCTTCCGGTCTTaGGGGTTGGGGGCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: APGLVCGWRPPGVPCVVCNFFRS*GLGALK
Trigger: CTTCAACGCCCCCAACCCTCAAGACCGGAAGAAATT...GCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp CCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCACCCGCAGGTCATCGGTaGATTTCTTCCGGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: PRVWCAAGDPRACPVWCAPAGHR*ISSGLE
Trigger: CTCAAGACCGGAAGAAATTCACCGATGACCTGCGGG...TGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGCCAGCCAGCCAAGGTaGCACACAGCCAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGASQPR*HTARGG
Trigger: GCCCCCTCTGGCTGTGTGTCACCTTGGCTGGCTGGC...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTTGGACACTCTCGTGTTaGTGTAGCTCTCCGGCGCAT +
Preference number: 4 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCWTLSC*CSSPAH
Trigger: ATGCGCCGGAGAGCTACATCAACACGAGAGTGTCCA...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp CCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCACAGAGTGCTGCAAGTaGGGCAGGACCACCGGTGGG +
Preference number: 4 (lower is better)
Translates to: PGVPCVVCRCFREPGTPTTECCK*GRTTGG
Trigger: CCCACCGGTGGTCCTGCCTCACTTGCAGCACTCTGT...GGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCCTCCTCAGCCTGCTTaGGCAGGATGGAGGTCGAGT +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPPPQPA*AGWRSS
Trigger: ACTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGG...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCGCAGGTCCGACTCGGTaGTGGACGGCCGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLAGPTR*WTAGPL
Trigger: CAGGGGACCGGCCGTCCAGCACCGAGTCGGACCTGC...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTTGCTTGGGACTGCCCTaGTGCCCGCCAAGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGCLGLP*CPPRLR
Trigger: GCGCAGCCTTGGCGGGCAGCAGGGCAGTCCCAAGCA...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTAGTCCGACTCAGACTTaGTCTGCCGGTTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: ATEVPRVWCAAGDPRACPSPTQT*SAGWLS
Trigger: GCTCAGCCAACCGGCAGAGCAAGTCTGAGTCGGACT...AGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGAGCTTCTCCACCTTCTaGACCTGGGACACATGGTCC +
Preference number: 4 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRSFSTF*TWDTWS
Trigger: GGACCATGTGTCCCAGGTGCAGAAGGTGGAGAAGCT...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCAGCCGAGCCCGGGATaGAGGGATCCGATCGGCTTT +
Preference number: 4 (lower is better)
Translates to: PGVPCVVCRCFREPGTPTQPSPG*RDPIGF
Trigger: AAAGCCGATCGGATCCCTGCATCCCGGGCTCGGCTG...GGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCGCGATCCCGCACTGCTaGGACGCCCTCGCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLAIPHC*DALASR
Trigger: CCGGGAAGCGAGGGCGTCGCAGCAGTGCGGGATCGC...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCGCTCCCCTCTCCTCCTaGCGTCCGGCCACGGCTCAC +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSAPLSS*RPATAH
Trigger: GTGAGCCGTGGCCGGACGGCAGGAGGAGAGGGGAGC...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCTACGCGAGGCCCTGCTaGCCAGCACAGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RTHRGQCHRLAARGCGACYARPC*PAQLQD
Trigger: GTCCTGGAGCTGTGCTGGGCAGCAGGGCCTCGCGTA...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCACCCCCACCTCACCCTaGTCAGTGTTGCAATGCTGC +
Preference number: 4 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAATPTSP*SVLQCC
Trigger: GCAGCATTGCAACACTGAGCAGGGTGAGGTGGGGGT...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTTGGACCCTTCCACATTaGTCTCTAGCGATCCCGCAC +
Preference number: 4 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCWTLPH*SLAIPH
Trigger: GTGCGGGATCGCTAGAGAGCAATGTGGAAGGGTCCA...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000648114.1
CDS-3UTR GCA 90 bp GGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGTGTGCGTGCTGGATGTaGTGGGGTGGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GEMATEVPRVWCAAGDPRCACWM*WGGWWW
Trigger: CCACCACCACCCACCCCAGCACATCCAGCACGCACA...CCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGGGAGATGAACACTTCTaGCGTGTATGGGTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: CPGFGVRLATPGRALCGVGDEHF*RVWVPL
Trigger: GAGGGGCACCCATACACGGCAGAAGTGTTCATCTCC...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCACAGACCTGCCGCGTaGAGGTCTGGCCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATHRPAA*RSGPGE
Trigger: CTCCCCAGGGCCAGACCTGCACGCGGCAGGTCTGTG...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAACTCGGGCACAGACCTaGCGCGTGCAGGTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGTRAQT*RVQVWP
Trigger: GGGCCAGACCTGCACGCGGCAGGTCTGTGCCCGAGT...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGCTGCCACAGGCCACTaGAGGGCTGAGCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGAATGH*RAEPQA
Trigger: GGCCTGTGGCTCAGCCCTGCAGTGGCCTGTGGCAGC...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR GCA 90 bp CCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCGGTCAGTGGAGAGGCTaGTTCCGGTGTCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PGVPCVVCRCFREPGTPTGQWRG*FRCPGS
Trigger: GCTCCCTGGACACCGGAAGCAGCCTCTCCACTGACC...GGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648114.1
CDS-3UTR CCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCTCACGTCGGGGCTCCTaGTCCAGCGTCCGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLSRRGS*SSVRRL
Trigger: GAGCCGGCGGACGCTGGACCAGGAGCCCCGACGTGA...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273221.8
CDS-3UTR CCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCCTGCTTGCGCAGGATaGAGGTCGAGTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPPACAG*RSSAAA
Trigger: AGCTGCAGCACTCGACCTCCATCCTGCGCAAGCAGG...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCATGGTGCGGGCCGCATaGCGGGTTACCAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSMVRAA*RVTRRP
Trigger: GGGGCGCCTGGTAACCCGCCATGCGGCCCGCACCAT...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAAACGCCGTCTGGATaGTGCGGGCCGCATGGCGGG +
Preference number: 4 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGETPSG*CGPHGG
Trigger: CCCGCCATGCGGCCCGCACCATCCAGACGGCGTTTC...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGCGAAACGCCGTCTaGATGGTGCGGGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: EDSATGWQPEAVELAGWRWRNAV*MVRAAW
Trigger: CCATGCGGCCCGCACCATCCAGACGGCGTTTCGCCA...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGCGGTTCTCTGACATaGAGCTGCGCAAGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: QQKCPGFGVRLATPGRALCGSLT*SCASAR
Trigger: TCGAGCGCTTGCGCAGCTCCATGTCAGAGAACCGCA...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCCCGTGCAGGGCTGTCTaGGGTTCGGTGTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSPCRAV*GSVSRA
Trigger: GGCCCGGGACACCGAACCCCAGACAGCCCTGCACGG...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTAGAGCTGTCGCTGGGTaGCTCGATGGTGAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RWQQKCPGFGVRLATPGRRAVAG*LDGEQR
Trigger: CCGCTGCTCACCATCGAGCCACCCAGCGACAGCTCT...ACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCTGTGGGGACCATGCTTaGGACTGCCCTGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: RTHRGQCHRLAARGCGACCGDHA*DCPAAR
Trigger: GCGGGCAGCAGGGCAGTCCCAAGCATGGTCCCCACA...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCCATTGATGGCCAAGTaGCTGTCCAGGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PGVPCVVCRCFREPGTPTPLMAK*LSRGLG
Trigger: CCCCAGGCCCCTGGACAGCCACTTGGCCATCAATGG...GGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTCGCTCGATGAGGTACTaGACTCCCTTCTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCRSMRY*TPFSGF
Trigger: GAAGCCTGAGAAGGGAGTCCAGTACCTCATCGAGCG...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCACGCTCGATGAGGTACTaGACTCCCTTCTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: PRVWCAAGDPRACPVWCARSMRY*TPFSGF
Trigger: GAAGCCTGAGAAGGGAGTCCAGTACCTCATCGAGCG...TGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCGCTGCAGCAGGAAGTaGGCCACCCCGACGGGCGTG +
Preference number: 4 (lower is better)
Translates to: KEHTECGGKPREGLSGFQRCSRK*ATPTGV
Trigger: CACGCCCGTCGGGGTGGCCCACTTCCTGCTGCAGCG...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGAGCACTGGGACATGCTaGGCCGCACGACGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVSTGTC*AARRLS
Trigger: AGAAAGGCGTCGTGCGGCCCAGCATGTCCCAGTGCT...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCGGGGGCTGCCCATGGTaGTGCACTGTGTGCCCCACG +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATGGCPW*CTVCPT
Trigger: CGTGGGGCACACAGTGCACCACCATGGGCAGCCCCC...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp ATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCGCTGTAGCGGTCAGTaGAGAGGCTGCTTCCGGTGT +
Preference number: 4 (lower is better)
Translates to: MATEVPRVWCAAGDPRACRCSGQ*RGCFRC
Trigger: ACACCGGAAGCAGCCTCTCCACTGACCGCTACAGCG...GCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648114.1
CDS-3UTR TCA 90 bp CGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCCATAGGCTCCCACTaGCGTGTGCTCGTAGTGATC +
Preference number: 4 (lower is better)
Translates to: RPPGVPCVVCRCFREPGTPIGSH*RVLVVI
Trigger: GATCACTACGAGCACACGTCAGTGGGAGCCTATGGG...GGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGCCGTCGTTAGTCACTaGGACCTGCTTCCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCAVVSH*DLLPLE
Trigger: TTCGAGGGGAAGCAGGTCTCAGTGACTAACGACGGC...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAACTCTGCCTCTTGAGTaGCCCCCGCTCCGAGCGGTC +
Preference number: 4 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGTLPLE*PPLRAV
Trigger: GACCGCTCGGAGCGGGGGTCACTCAAGAGGCAGAGT...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCGCTCTGCCGGTTGGCTaGGCCATTGATGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: PGVPCVVCRCFREPGTPTALPVG*AIDGQV
Trigger: CACTTGGCCATCAATGGCTCAGCCAACCGGCAGAGC...GGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp AGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCGCCTGGAATTTCCTaGGGGCCTCATCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RWQQKCPGFGVRLATPGRAPGIS*GPHPAP
Trigger: TGGAGCTGGATGAGGCCCTCAGGAAATTCCAGGCGC...ACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GTGGGTGACTCGGGCACAGACCTGCCGCGTGCAGGTCTGGCCCTGGGGAGCGCACCGAAGCTGTGGCTCTaGCAGGTGGGATCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: VGDSGTDLPRAGLALGSAPKLWL*QVGSLK
Trigger: CTTTAGAGATCCCACCTGTCAGAGCCACAGCTTCGG...TGCGCTCCCCAGGGCCAGACCTGCACGCGGCAGGTCTGTGCCCGAGTCACCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCGCTGCATGCAGTGTGTaGGGGAAAGATCACTGCACT +
Preference number: 4 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPAACSV*GKDHCT
Trigger: AGTGCAGTGATCTTTCCCTCACACACTGCATGCAGC...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGCCAGGCTTCTTGTaGGGGAGGTGTCCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCVPGFL*GRCPLK
Trigger: CTTCAAGGGACACCTCCCTCACAAGAAGCCTGGCAC...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGGCAAGCCATCCTGTGTaGATCCGTTCTTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWASHPV*IRSSLF
Trigger: GAACAGGGAAGAACGGATTCACACAGGATGGCTTGC...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGCTCTCCGGCGCATGTaGGGACTGCTAATGATGGAC +
Preference number: 4 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCALRRM*GLLMMD
Trigger: GTCCATCATTAGCAGTCCTCACATGCGCCGGAGAGC...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGAATGGAGGTCGAGTGCTaGAGCTTGGGCCTCCGCGTG +
Preference number: 4 (lower is better)
Translates to: EDSATGWQPEAVELAGWRMEVEC*SLGLRV
Trigger: CACGCGGAGGCCCAAGCTGCAGCACTCGACCTCCAT...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCACGCCGTCTGGATGGTaGGGGCCGCATGGCGGGTTA +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATTPSGW*GPHGGL
Trigger: TAACCCGCCATGCGGCCCGCACCATCCAGACGGCGT...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGTCTCTGACATGGAGCTaGGCAAGCGCTCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: PGFGVRLATPGRALCGVQSLTWS*ASARSS
Trigger: AGAACTTCGAGCGCTTGCGCAGCTCCATGTCAGAGA...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCGCCAGTGATTTCACTTaGCTAGAGAAGGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPASDFT*LEKASS
Trigger: GGAGGACGCCTTCTCTAGGCAAGTGAAATCACTGGC...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCGGTGGTCCATGCCGTaGAGGGCTGTCTGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATRWSMP*RAVWGS
Trigger: CGAACCCCAGACAGCCCTGCACGGCATGGACCACCG...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGTGCTTGGGACTGCCCTaGTGCCCGCCAAGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: KEHTECGGKPREGLSGFQCLGLP*CPPRLR
Trigger: GCGCAGCCTTGGCGGGCAGCAGGGCAGTCCCAAGCA...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCAGAGGTTCAGGCCGATaGGGTAGTGCCTCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: RPPGVPCVVCRCFREPGTRGSGR*GSASCG
Trigger: TCCGCAAGAGGCACTACCGCATCGGCCTGAACCTCT...GGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCGCACGACGCCTTTCTaGTTCTCGAGCTCCGACTCT +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPRTTPF*FSSSDS
Trigger: AGAGTCGGAGCTCGAGAAGCAGAAAGGCGTCGTGCG...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGTGGTACTGGTGTGCGTaGTGGATGTGCTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GRDGNRSAPGLVCGWRPPWYWCA*WMCWGG
Trigger: CCCACCCCAGCACATCCAGCACGCACACCAGTACCA...CGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GCTGGGTGGCCCCCATGGGGGCCGTGGTGGTACTGGTGTGCGTGCTGGATGTGCGTGCCCTGTGTGGTGTaGAGGTGTTTCAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: AGWPPWGPWWYWCACWMCVPCVV*RCFREP
Trigger: AGGCTCCCTGAAACACCTGCACACCACACAGGGCAC...GCACATCCAGCACGCACACCAGTACCACCACGGCCCCCATGGGGGCCACCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR GCA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGGTGCCCTGTGTGGTGTaGAGGTGTTTCAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVVPCVV*RCFREP
Trigger: AGGCTCCCTGAAACACCTGCACACCACACAGGGCAC...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp ATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCAGATGGCAACAGAAGTaGCCCGGGTTTGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: MATEVPRVWCAAGDPRACRWQQK*PGFGVR
Trigger: CCGCACACCAAACCCGGGGCACTTCTGTTGCCATCT...GCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGACTTGCGCCTGCCTCCTaGCAGGAGACAGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: EDSATGWQPEAVELAGWRLAPAS*QETAVA
Trigger: AGCCACTGCTGTCTCCTGGCAGGAGGCAGGCGCAAG...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR GCA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCGCACAACCTTGCGCCTaGCTCCTGCCAGGAGACAGC +
Preference number: 4 (lower is better)
Translates to: RTHRGQCHRLAARGCGACAQPCA*LLPGDS
Trigger: GCTGTCTCCTGGCAGGAGGCAGGCGCAAGGTTGTGC...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR CCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGTGCCAGTCTCACTGCTaGGGGCCTCGCCCTCGACGC +
Preference number: 4 (lower is better)
Translates to: KEHTECGGKPREGLSGFQCQSHC*GPRPRR
Trigger: GCGTCGAGGGCGAGGCCCCCAGCAGTGAGACTGGCA...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273221.8
ENST00000646269.1
CDS-3UTR CCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCTGGCGAAACGCCGTCTaGATGGTGCGGGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATWRNAV*MVRAAW
Trigger: CCATGCGGCCCGCACCATCCAGACGGCGTTTCGCCA...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCACCAGGGCTCCCAGCTaGGAGCCGTCGTTAGTCACT +
Preference number: 4 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPTRAPS*EPSLVT
Trigger: AGTGACTAACGACGGCTCCCAGCTGGGAGCCCTGGT...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCTCGTCCAGTTTGCGGTaGTCCATGCCGTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPSSSLR*SMPCRA
Trigger: AGCCCTGCACGGCATGGACCACCGCAAACTGGACGA...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCAGTGTGGGGACCATGCTTaGGACTGCCCTGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: EHTECGGKPREGLSGFQQCGDHA*DCPAAR
Trigger: GCGGGCAGCAGGGCAGTCCCAAGCATGGTCCCCACA...CTGCTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGTCCACCTTCTGCACCTaGGACACATGGTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: PGFGVRLATPGRALCGVQSTFCT*DTWSSL
Trigger: CAATGAGGACCATGTGTCCCAGGTGCAGAAGGTGGA...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGCAGACCAACCGACGGTaGGGCAGAGAGAGCACACAG +
Preference number: 4 (lower is better)
Translates to: GRDGNRSAPGLVCGWRPPQTNRR*GRESTQ
Trigger: CTGTGTGCTCTCTCTGCCCCACCGTCGGTTGGTCTG...CGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGGGGCTTGTTTGGGTCTaGAACCTCAAAGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: QQKCPGFGVRLATPGRALGLVWV*NLKEPA
Trigger: TGCCGGCTCTTTGAGGTTCCAGACCCAAACAAGCCC...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTTGGACTTCCGCAATaGACTCCCGCAGGTCATCGG +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPLGLPQ*TPAGHR
Trigger: CCGATGACCTGCGGGAGTCCATTGCGGAAGTCCAAG...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCTTGGACTTCCGCAATaGACTCCCGCAGGTCATCGG +
Preference number: 4 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVLGLPQ*TPAGHR
Trigger: CCGATGACCTGCGGGAGTCCATTGCGGAAGTCCAAG...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCAAATCGGCAAAACCCTaGCCAGCCAGCCAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: RPPGVPCVVCRCFREPGTKSAKP*PASQPR
Trigger: CCTTGGCTGGCTGGCTGGCCAGGGTTTTGCCGATTT...GGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCGTGGAGCTTGCAGGATaGCGATGGAGAGGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAAVELAG*RWRGRV
Trigger: AACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCAC...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCGGGCATAGTCTGGTGTaGGCGAGATGGACACTCTCG +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPGHSLV*ARWTLS
Trigger: CGAGAGTGTCCATCTCGCCCACACCAGACTATGCCC...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGGGCATAGTCTGGTGTaGGCGAGATGGACACTCTCG +
Preference number: 4 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCGHSLV*ARWTLS
Trigger: CGAGAGTGTCCATCTCGCCCACACCAGACTATGCCC...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGTGCCGCGTGCAGGTCTaGCCCTGGGGAGCGCATGGT +
Preference number: 4 (lower is better)
Translates to: KEHTECGGKPREGLSGFQCRVQV*PWGAHG
Trigger: ACCATGCGCTCCCCAGGGCCAGACCTGCACGCGGCA...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCGAGGCTGGCCTGGGATaGGAGAGGCGAGCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: RTHRGQCHRLAARGCGACEAGLG*ERRAQR
Trigger: TCTCTGAGCTCGCCTCTCCCATCCCAGGCCAGCCTC...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR TCA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTCATTGTCACCGTCTaGGTAGTCCGACTCAGACTT +
Preference number: 4 (lower is better)
Translates to: PGFGVRLATPGRALCGVQVIVTV*VVRLRL
Trigger: AAGTCTGAGTCGGACTACTCAGACGGTGACAATGAC...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGGCTGTCACGGGACGATaGCTCGGAGCTGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: ERWQQKCPGFGVRLATPGAVTGR*LGAAVD
Trigger: ATCAACTGCAGCTCCGAGTCATCGTCCCGTGACAGC...CCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGGGTAGGTCTGCTTGCTaGGCGTCTGCTCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: AARGCGACRMAMERESFLGRSAC*ASAPAG
Trigger: GCCTGCGGGAGCAGACGCTCAGCAAGCAGACCTACC...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCTCTCAGGCTTCTTGTTaGAGAGGTTCAGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAASQASC*RGSGRC
Trigger: GCATCGGCCTGAACCTCTTCAACAAGAAGCCTGAGA...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCAAAGCCACGCTCGATaGGGTACTGGACTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPQSHAR*GTGLPS
Trigger: AGAAGGGAGTCCAGTACCTCATCGAGCGTGGCTTTG...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCGCTTTTTCCCCACAATaGGCTTCTCCACCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPAFSPQ*ASPPSA
Trigger: TGCAGAAGGTGGAGAAGCTCATTGTGGGGAAAAAGC...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp ATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCCGCAGGTCATCGGTaGATTTCTTCCGGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: MATEVPRVWCAAGDPRACPAGHR*ISSGLE
Trigger: CTCAAGACCGGAAGAAATTCACCGATGACCTGCGGG...GCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCCCGCAGGTCATCGGTaGATTTCTTCCGGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPPAGHR*ISSGLE
Trigger: CTCAAGACCGGAAGAAATTCACCGATGACCTGCGGG...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGCGCAGCCTCACAGCTaGCGCCAGATGACATGCAGC +
Preference number: 4 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGAQPHS*RQMTCS
Trigger: GCTGCATGTCATCTGGCGTCAGCTGTGAGGCTGCGC...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGCTCTCCGGCGCATGTaGGGACTGCTAATGATGGAC +
Preference number: 4 (lower is better)
Translates to: GRDGNRSAPGLVCGWRPPALRRM*GLLMMD
Trigger: GTCCATCATTAGCAGTCCTCACATGCGCCGGAGAGC...CGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGTGGACACTCTCGTGTTaGTGTAGCTCTCCGGCGCAT +
Preference number: 4 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVWTLSC*CSSPAH
Trigger: ATGCGCCGGAGAGCTACATCAACACGAGAGTGTCCA...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCACAGAGTGCTGCAAGTaGGGCAGGACCACCGGTGGG +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATTECCK*GRTTGG
Trigger: CCCACCGGTGGTCCTGCCTCACTTGCAGCACTCTGT...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCTCCCTCAGACTGAGGTaGGCAGAGCCCAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATSLRLR*AEPRVP
Trigger: TGGCACCCTGGGCTCTGCTCACCTCAGTCTGAGGGA...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR TCA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTACCCATCCCTCAGACTaGGGTGAGCAGAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGTHPSD*GEQSPG
Trigger: CCCTGGGCTCTGCTCACCTCAGTCTGAGGGATGGGT...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp AGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTTCACCGTTTCAAGGCTaGTGGTGTCTGAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: RWQQKCPGFGVRLATPGRSPFQG*WCLRPT
Trigger: GGTGGGCCTCAGACACCATCAGCCTTGAAACGGTGA...ACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR TCA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTTCACACGGGCCACGGTaGGGACACAGGGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGSHGPR*GHRGSA
Trigger: AGCAGAACCCCTGTGTCCTCACCGTGGCCCGTGTGA...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGGCTTGGGCCTCCGCGTaGGCTGCTGTTGCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: PGRNSLLKIARQSALGSLAWASA*AAVAPA
Trigger: CGCCGGGGCAACAGCAGCGCACGCGGAGGCCCAAGC...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CTGGAGTGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGCTTGGGCCTCCGCGTaGGCTGCTGTTGCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: LEWGRQFNTTWLAHRFKAAWASA*AAVAPA
Trigger: CGCCGGGGCAACAGCAGCGCACGCGGAGGCCCAAGC...AGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCACTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR GCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCATGGAGGTCGAGTGCTaGAGCTTGGGCCTCCGCGTG +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATMEVEC*SLGLRV
Trigger: CACGCGGAGGCCCAAGCTGCAGCACTCGACCTCCAT...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGACCTCCTCAGCCTGCTTaGGCAGGATGGAGGTCGAGT +
Preference number: 4 (lower is better)
Translates to: EDSATGWQPEAVELAGWRPPQPA*AGWRSS
Trigger: ACTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGG...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGACGCCGTCTGGATGGTaGGGGCCGCATGGCGGGTTA +
Preference number: 4 (lower is better)
Translates to: KEHTECGGKPREGLSGFQTPSGW*GPHGGL
Trigger: TAACCCGCCATGCGGCCCGCACCATCCAGACGGCGT...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGGCCAGTGATTTCACTTaGCTAGAGAAGGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QQKCPGFGVRLATPGRALASDFT*LEKASS
Trigger: GGAGGACGCCTTCTCTAGGCAAGTGAAATCACTGGC...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCGGTGCCTCCTCAGTGTaGAGGCTGCGGCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATGASSV*RLRQLR
Trigger: CCTCAACTGCCGCAGCCTGCACACTGAGGAGGCACC...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGCGCAGCCGCTGCTCCTaGCGCTCCAGCGACGGCGTG +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSERSRCS*RSSDGV
Trigger: CACGCCGTCGCTGGAGCGGCAGGAGCAGCGGCTGCG...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGGACCATGCTTGGGACTaGCCTGCTGCCCGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: KEHTECGGKPREGLSGFQDHAWD*PAARQG
Trigger: GCCTTGGCGGGCAGCAGGGCAGTCCCAAGCATGGTC...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCAGAGGTTCAGGCCGATaGGGTAGTGCCTCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPRGSGR*GSASCG
Trigger: TCCGCAAGAGGCACTACCGCATCGGCCTGAACCTCT...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCTCGAAGAGCAGGACCTaGATGCCGTACAAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAASKSRT*MPYKEK
Trigger: CTTCTCCTTGTACGGCATGCAGGTCCTGCTCTTCGA...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTTCGAAGAGCAGGACCTaGATGCCGTACAAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ATEVPRVWCAAGDPRACPSKSRT*MPYKEK
Trigger: CTTCTCCTTGTACGGCATGCAGGTCCTGCTCTTCGA...AGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCCGCACGACGCCTTTCTaGTTCTCGAGCTCCGACTCT +
Preference number: 4 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPRTTPF*FSSSDS
Trigger: AGAGTCGGAGCTCGAGAAGCAGAAAGGCGTCGTGCG...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCCTCCCTCTTGTCCTGTaGTCAGCACCCCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: RTHRGQCHRLAARGCGACLPLVL*SAPPPH
Trigger: GTGAGGTGGGGGTGCTGAGCACAGGACAAGAGGGAG...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTGGGTCGAGAGAAGGCTaGCCCGGGTTTGCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGGSREG*PGFALA
Trigger: TGCGAGAGCAAACCCGGGGCAGCCTTCTCTCGACCC...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGTCGAGTGCTGCAGCTTaGGCCTCCGCGTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: AARGCGACRMAMERESFLSSAAA*ASACAA
Trigger: AGCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGA...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCTGGCGAAACGCCGTCTaGATGGTGCGGGCCGCATGG +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLWRNAV*MVRAAW
Trigger: CCATGCGGCCCGCACCATCCAGACGGCGTTTCGCCA...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGTGCGGTTCTCTGACATaGAGCTGCGCAAGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: GEMATEVPRVWCAAGDPRCGSLT*SCASAR
Trigger: TCGAGCGCTTGCGCAGCTCCATGTCAGAGAACCGCA...CCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGTGCGGTTCTCTGACATaGAGCTGCGCAAGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: GRDGNRSAPGLVCGWRPPCGSLT*SCASAR
Trigger: TCGAGCGCTTGCGCAGCTCCATGTCAGAGAACCGCA...CGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCTCGTCCAGTTTGCGGTaGTCCATGCCGTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RTHRGQCHRLAARGCGACSSSLR*SMPCRA
Trigger: AGCCCTGCACGGCATGGACCACCGCAAACTGGACGA...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGCAGGGCCCAGTAGTCTaGGGCTGCGCCCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSEQGPVV*GCAPSP
Trigger: CGGGCTGGGGGCGCAGCCCCAGACTACTGGGCCCTG...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCTGTGGGGACCATGCTTaGGACTGCCCTGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLCGDHA*DCPAAR
Trigger: GCGGGCAGCAGGGCAGTCCCAAGCATGGTCCCCACA...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTTGGGGGCGCCGCTGTaGGGACCATGCTTGGGACTG +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSLGAPL*GPCLGL
Trigger: CAGTCCCAAGCATGGTCCCCACAGCGGCGCCCCCAA...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCAGCCATTGATGGCCAAGTaGCTGTCCAGGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: EHTECGGKPREGLSGFQQPLMAK*LSRGLG
Trigger: CCCCAGGCCCCTGGACAGCCACTTGGCCATCAATGG...CTGCTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGGATGAAAATGGTGTCTaGGTTCCGGAATTGCCGCAC +
Preference number: 4 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWDENGV*VPELPH
Trigger: GTGCGGCAATTCCGGAACCCAGACACCATTTTCATC...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGTGCACCTGGGACACATaGTCCTCATTGGTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: CPGFGVRLATPGRALCGVCTWDT*SSLVFS
Trigger: GCTAAAGACCAATGAGGACCATGTGTCCCAGGTGCA...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGCACCTGGGACACATaGTCCTCATTGGTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWCTWDT*SSLVFS
Trigger: GCTAAAGACCAATGAGGACCATGTGTCCCAGGTGCA...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCGGGCTTGTTTGGGTCTaGAACCTCAAAGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPGLVWV*NLKEPA
Trigger: TGCCGGCTCTTTGAGGTTCCAGACCCAAACAAGCCC...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCTTTCTGGGGCTTGTTTaGGTCTGGAACCTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: APGLVCGWRPPGVPCVVCFLGLV*VWNLKE
Trigger: CTCTTTGAGGTTCCAGACCCAAACAAGCCCCAGAAA...GCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTAGTCCGAGTTTCTaGGGCTTGTTTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRCSPSF*GLFGSG
Trigger: TCCAGACCCAAACAAGCCCCAGAAACTCGGACTACA...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGAAGCACTGGGACATGCTaGGCCGCACGACGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: EDSATGWQPEAVELAGWRSTGTC*AARRLS
Trigger: AGAAAGGCGTCGTGCGGCCCAGCATGTCCCAGTGCT...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGCACCACGCTGTCCACTaGGAACGCGGCCCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSEHHAVH*ERGPAA
Trigger: GGCCGCGGGGCCGCGTTCCCAGTGGACAGCGTGGTG...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGACCTGACAGCCCAGCCTaGACCCAATCACACGGTCCC +
Preference number: 4 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGPDSPA*TQSHGP
Trigger: GGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCGACAGTGCCACAGGCTaGCAGCCCGAGGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLDSATG*QPEAVE
Trigger: CTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTC...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGAGTTGGGCATAGTCTaGTGTGGGCGAGATGGACAC +
Preference number: 4 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCELGIV*CGRDGH
Trigger: GTGTCCATCTCGCCCACACCAGACTATGCCCAACTC...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CTGGAGTGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGGTTTGGTGTGCGGCTaGCGACCCCCGGGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: LEWGRQFNTTWLAHRFKAGLVCG*RPPGVP
Trigger: GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACC...AGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCACTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR CCA 90 bp GCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCGGTTCTGCTAGCACATaGCTACATGGAATTACGGTG +
Preference number: 4 (lower is better)
Translates to: APGLVCGWRPPGVPCVVCGSAST*LHGITV
Trigger: CACCGTAATTCCATGTAGCCATGTGCTAGCAGAACC...GCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCGTGCAGGTCTGGCCCTaGGGAGCGCATGGTGTCACC +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSVQVWP*GAHGVT
Trigger: GGTGACACCATGCGCTCCCCAGGGCCAGACCTGCAC...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCGCAGGCTGCGGCAGTTaGGGGCATCGTCGATGGACT +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLAGCGS*GHRRWT
Trigger: AGTCCATCGACGATGCCCTCAACTGCCGCAGCCTGC...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGCATCGATGTACAGGGTaGCATCACTGTACGAGGCCG +
Preference number: 4 (lower is better)
Translates to: GEMATEVPRVWCAAGDPRHRCTG*HHCTRP
Trigger: CGGCCTCGTACAGTGATGTCACCCTGTACATCGATG...CCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGAAGCACTCTGCCTCTTaGGTGACCCCCGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: KEHTECGGKPREGLSGFQKHSAS*VTPAPS
Trigger: GCTCGGAGCGGGGGTCACTCAAGAGGCAGAGTGCTT...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGCTCTGCCGGTTGGCTaGGCCATTGATGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGALPVG*AIDGQV
Trigger: CACTTGGCCATCAATGGCTCAGCCAACCGGCAGAGC...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGTCTCAGGCTTCTTGTTaGAGAGGTTCAGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVSQASC*RGSGRC
Trigger: GCATCGGCCTGAACCTCTTCAACAAGAAGCCTGAGA...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTCCACCAGGAGGTCGTTaGACAGGAAGATTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCPPGGR*TGRFLA
Trigger: AGCGAGAAATCTTCCTGTTCAACGACCTCCTGGTGG...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGAATTTCTTCCGGTCTTaGGGGTTGGGGGCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVNFFRS*GLGALK
Trigger: CTTCAACGCCCCCAACCCTCAAGACCGGAAGAAATT...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGAGAGGGAGAGTTTCCTaGAAGCCCCTCCTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: ERWQQKCPGFGVRLATPGRGRVS*KPLLGF
Trigger: AAACCCCAGGAGGGGCTTTCAGGAAACTCTCCCTCT...CCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGCTCTCCGAGTTGCAGTaGAGGCACCACATGGCGGCC +
Preference number: 4 (lower is better)
Translates to: AARGCGACRMAMERESFLLSELQ*RHHMAA
Trigger: GGCCGCCATGTGGTGCCTGCACTGCAACTCGGAGAG...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273221.8
CDS-3UTR GCA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCCAATCCGGCGTGACATaGGGTTCTCTGACATGGAGC +
Preference number: 4 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPQSGVT*GSLTWS
Trigger: GCTCCATGTCAGAGAACCGCATGTCACGCCGGATTG...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCGTTTGCGGTGGTCCATaGCGTGCAGGGCTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLVCGGP*RAGLSG
Trigger: CCCAGACAGCCCTGCACGGCATGGACCACCGCAAAC...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGGACGGCCGGTCCCCTaGCTGCGAGAGGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: WGRQFNTTWLAHRFKADGGRPVP*LREGQR
Trigger: CCTCTGCCCCTCTCGCAGGCAGGGGACCGGCCGTCC...ACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR GCA 90 bp GGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGGCTCCAGCGACGGCGTaGTCCGGCAGCTCGTGTCCG +
Preference number: 4 (lower is better)
Translates to: GGGSSTLLGWLTVSRLMVAPATA*SGSSCP
Trigger: CGGACACGAGCTGCCGGAGCACGCCGTCGCTGGAGC...CACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR GCA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGGCTCCAGCGACGGCGTaGTCCGGCAGCTCGTGTCCG +
Preference number: 4 (lower is better)
Translates to: PGRNSLLKIARQSALGSLAPATA*SGSSCP
Trigger: CGGACACGAGCTGCCGGAGCACGCCGTCGCTGGAGC...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGAGCTTCTCCACCTTCTaGACCTGGGACACATGGTCC +
Preference number: 4 (lower is better)
Translates to: ERWQQKCPGFGVRLATPGSFSTF*TWDTWS
Trigger: GGACCATGTGTCCCAGGTGCAGAAGGTGGAGAAGCT...CCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCAGAGCAGGACCTGCATaGCGTACAAGGAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPRAGPA*RTRRRT
Trigger: AGTCCTTCTCCTTGTACGGCATGCAGGTCCTGCTCT...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTCCGACTCTATCCTGTaGTTCTCCATCTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRSDSIL*FSISWT
Trigger: AGTCCAAGAGATGGAGAAGCACAGGATAGAGTCGGA...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp CTGGAGTGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGCGATCCCGCACTGCTaGGACGCCCTCGCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: LEWGRQFNTTWLAHRFKAAIPHC*DALASR
Trigger: CCGGGAAGCGAGGGCGTCGCAGCAGTGCGGGATCGC...AGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCACTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGGCGATCCCGCACTGCTaGGACGCCCTCGCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSEAIPHC*DALASR
Trigger: CCGGGAAGCGAGGGCGTCGCAGCAGTGCGGGATCGC...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCCACCCTGCTCAGTGTTaGAATGCTGCCTTGACTATT +
Preference number: 4 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPHPAQC*NAALTI
Trigger: AATAGTCAAGGCAGCATTGCAACACTGAGCAGGGTG...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCGAGATGCATGCTGTGTaGAGTCTCGATGTGACTGCA +
Preference number: 4 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAAEMHAV*SLDVTA
Trigger: TGCAGTCACATCGAGACTGCACACAGCATGCATCTC...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCGTGGTGGTACTGGTGTaGGTGCTGGATGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATVVVLV*VLDVLG
Trigger: CCCCAGCACATCCAGCACGCACACCAGTACCACCAC...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGATGGTGCGGGCCGCATaGCGGGTTACCAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: PGRNSLLKIARQSALGSLMVRAA*RVTRRP
Trigger: GGGGCGCCTGGTAACCCGCCATGCGGCCCGCACCAT...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTCGCTCGATGAGGTACTaGACTCCCTTCTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: RWQQKCPGFGVRLATPGRRSMRY*TPFSGF
Trigger: GAAGCCTGAGAAGGGAGTCCAGTACCTCATCGAGCG...ACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCTGCACCTGGGACACATaGTCCTCATTGGTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAACTWDT*SSLVFS
Trigger: GCTAAAGACCAATGAGGACCATGTGTCCCAGGTGCA...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCTCCACCTTCTGCACCTaGGACACATGGTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPSTFCT*DTWSSL
Trigger: CAATGAGGACCATGTGTCCCAGGTGCAGAAGGTGGA...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCGGGCTTGTTTGGGTCTaGAACCTCAAAGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PGVPCVVCRCFREPGTPTGLVWV*NLKEPA
Trigger: TGCCGGCTCTTTGAGGTTCCAGACCCAAACAAGCCC...GGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGACTTGGACTTCCGCAATaGACTCCCGCAGGTCATCGG +
Preference number: 4 (lower is better)
Translates to: EDSATGWQPEAVELAGWRLGLPQ*TPAGHR
Trigger: CCGATGACCTGCGGGAGTCCATTGCGGAAGTCCAAG...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCTTGAGGCTAGAGCACTaGGACATGCTGGGCCGCACG +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATLRLEH*DMLGRT
Trigger: CGTGCGGCCCAGCATGTCCCAGTGCTCTAGCCTCAA...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGCCTGACAGCCCAGCCTaGACCCAATCACACGGTCCC +
Preference number: 4 (lower is better)
Translates to: AARGCGACRMAMERESFLPDSPA*TQSHGP
Trigger: GGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCGGCAGCCCGAGGCTGTaGAGCTTGCAGGATGGCGAT +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSGSPRL*SLQDGD
Trigger: ATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCC...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGGGGATGAGGACGTTATaGTGTTGGGGAGACGAGGAT +
Preference number: 4 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVGMRTL*CWGDED
Trigger: ATCCTCGTCTCCCCAACACCATAACGTCCTCATCCC...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp GGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGAGTCATGTGATGCCCTaGCAGCTCACTGGACCATGG +
Preference number: 4 (lower is better)
Translates to: GEMATEVPRVWCAAGDPRSHVMP*QLTGPW
Trigger: CCATGGTCCAGTGAGCTGCCAGGGCATCACATGACT...CCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp GGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGCTGGAGATCTGGGTCTaGCCAACAGGGCAACTTCTG +
Preference number: 4 (lower is better)
Translates to: GEMATEVPRVWCAAGDPRLEIWV*PTGQLL
Trigger: CAGAAGTTGCCCTGTTGGCCAGACCCAGATCTCCAG...CCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp GAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCAGCCCAGAGTCTCCTCCTaGCCAGGGAACGGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: EHTECGGKPREGLSGFQQPRVSS*PGNGSL
Trigger: AAGAGAGCCGTTCCCTGGCCAGGAGGAGACTCTGGG...CTGCTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR TCA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATAGGCTCCCACTaGCGTGTGCTCGTAGTGATC +
Preference number: 4 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGPIGSH*RVLVVI
Trigger: GATCACTACGAGCACACGTCAGTGGGAGCCTATGGG...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCGATGGACTCGGCCAGTaGTTTCACTTGCCTAGAGAA +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPDGLGQ*FHLPRE
Trigger: TTCTCTAGGCAAGTGAAATCACTGGCCGAGTCCATC...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp CGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCGATGGACTCGGCCAGTaGTTTCACTTGCCTAGAGAA +
Preference number: 4 (lower is better)
Translates to: RPPGVPCVVCRCFREPGTDGLGQ*FHLPRE
Trigger: TTCTCTAGGCAAGTGAAATCACTGGCCGAGTCCATC...GGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTGGTTGGCTGAGCCATTaGTGGCCAAGTGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGGWLSH*WPSGCP
Trigger: TGGACAGCCACTTGGCCATCAATGGCTCAGCCAACC...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCGCTGTCACGGGACGATaGCTCGGAGCTGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATAVTGR*LGAAVD
Trigger: ATCAACTGCAGCTCCGAGTCATCGTCCCGTGACAGC...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGCTGTCACGGGACGATaGCTCGGAGCTGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGAVTGR*LGAAVD
Trigger: ATCAACTGCAGCTCCGAGTCATCGTCCCGTGACAGC...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp AGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTTCTCAGGCTTCTTGTTaGAGAGGTTCAGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: RWQQKCPGFGVRLATPGRSQASC*RGSGRC
Trigger: GCATCGGCCTGAACCTCTTCAACAAGAAGCCTGAGA...ACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGGCGCCTGGAATTTCCTaGGGGCCTCATCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AARGCGACRMAMERESFLAPGIS*GPHPAP
Trigger: TGGAGCTGGATGAGGCCCTCAGGAAATTCCAGGCGC...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGGCGCCTGGAATTTCCTaGGGGCCTCATCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KEHTECGGKPREGLSGFQAPGIS*GPHPAP
Trigger: TGGAGCTGGATGAGGCCCTCAGGAAATTCCAGGCGC...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCAGTTAGGAGCACAGCACTaGCGGCTGCAGTGGCTCGAA +
Preference number: 4 (lower is better)
Translates to: EHTECGGKPREGLSGFQQLGAQH*RLQWLE
Trigger: TTCGAGCCACTGCAGCCGTCAGTGCTGTGCTCCTAA...CTGCTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGGCCAGCCAGCCAAGGTaGCACACAGCCAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSEASQPR*HTARGG
Trigger: GCCCCCTCTGGCTGTGTGTCACCTTGGCTGGCTGGC...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGAGCTTCCCGTGGCGCTaGGTCAACACCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: AARGCGACRMAMERESFLSFPWR*VNTQHQ
Trigger: CTGATGCTGGGTGTTGACTCAGCGCCACGGGAAGCT...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTCGATGCAGATGCATCTaGATGGAGGGCAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGRCRCI*MEGRPP
Trigger: AGGAGGCCTGCCCTCCATTCAGATGCATCTGCATCG...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCTGTGCAGTCTCGATGTaGCTGCACACAGAAGGGCGA +
Preference number: 4 (lower is better)
Translates to: RTHRGQCHRLAARGCGACCAVSM*LHTEGR
Trigger: TCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACA...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCTTGGGGAGACGAGGATaGGAGCTGGTCACTTTCATG +
Preference number: 4 (lower is better)
Translates to: PGVPCVVCRCFREPGTPTLGRRG*ELVTFM
Trigger: CATGAAAGTGACCAGCTCTCATCCTCGTCTCCCCAA...GGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGAGGGGCGTCCGCCGGTaGGGAAAAGCTCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSERGVRR*GKAQLP
Trigger: CGGCAGCTGAGCTTTTCCTCACCGGCGGACGCCCCT...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR GCA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATCGCGTGCGCTGCTGTTaGCCCGGCGGCCCCGAGTAC +
Preference number: 4 (lower is better)
Translates to: DACCVQSRCDCTQKGDADRVRCC*PGGPEY
Trigger: GTACTCGGGGCCGCCGGGGCAACAGCAGCGCACGCG...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGGGACGGCCGGTCCCCTaGCTGCGAGAGGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VQSRCDCTQKGDADASEWGRPVP*LREGQR
Trigger: CCTCTGCCCCTCTCGCAGGCAGGGGACCGGCCGTCC...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGCAGGTCCGACTCGGTaGTGGACGGCCGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: WGRQFNTTWLAHRFKADGAGPTR*WTAGPL
Trigger: CAGGGGACCGGCCGTCCAGCACCGAGTCGGACCTGC...ACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR GCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCTCCACCCGCAGCCGCTaGTCCTGCCGCTCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFSTRSR*SCRSSD
Trigger: GTCGCTGGAGCGGCAGGAGCAGCGGCTGCGGGTGGA...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCAGAGAGGTTCAGGCCGATaGGGTAGTGCCTCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: EHTECGGKPREGLSGFQQRGSGR*GSASCG
Trigger: TCCGCAAGAGGCACTACCGCATCGGCCTGAACCTCT...CTGCTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCTCTGGGTTCCGGAATTaGCGCACCACCCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLSGFRN*RTTPGL
Trigger: CAACCCTGGGGTGGTGCGGCAATTCCGGAACCCAGA...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGAAGCTTCTCCACCTTCTaGACCTGGGACACATGGTCC +
Preference number: 4 (lower is better)
Translates to: EDSATGWQPEAVELAGWRSFSTF*TWDTWS
Trigger: GGACCATGTGTCCCAGGTGCAGAAGGTGGAGAAGCT...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGAGAGCAGGACCTGCATaGCGTACAAGGAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: ERWQQKCPGFGVRLATPGRAGPA*RTRRRT
Trigger: AGTCCTTCTCCTTGTACGGCATGCAGGTCCTGCTCT...CCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGAGAGCAGGACCTGCATaGCGTACAAGGAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: GEMATEVPRVWCAAGDPRRAGPA*RTRRRT
Trigger: AGTCCTTCTCCTTGTACGGCATGCAGGTCCTGCTCT...CCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCTCCGACTCTATCCTGTaGTTCTCCATCTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAASDSIL*FSISWT
Trigger: AGTCCAAGAGATGGAGAAGCACAGGATAGAGTCGGA...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGAGAACTGTAAGACTGTaGGTGCTTACCTGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: GRDGNRSAPGLVCGWRPPRTVRL*VLTCGH
Trigger: GTGCCCGCAGGTAAGCACGCACAGTCTTACAGTTCT...CGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp GCTCACTGGACCATGGGAAGGCAGCGGGGGCTCCGCCGGGCACTCGTCGGCTGGCGAAATAGCGTCTTCTaGAAGCCATCCTGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: AHWTMGRQRGLRRALVGWRNSVF*KPSCVN
Trigger: ATTCACACAGGATGGCTTGCAGAAGACGCTATTTCG...CCAGCCGACGAGTGCCCGGCGGAGCCCCCGCTGCCTTCCCATGGTCCAGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGGATCCGGGCTCAGGCTaGAACCGGGCACCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSEDPGSG*NRAPRG
Trigger: GCCCCTTGGTGCCCGGTTCCAGCCTGAGCCCGGATC...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCCTGCTTGCGCAGGATaGAGGTCGAGTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KEHTECGGKPREGLSGFQPACAG*RSSAAA
Trigger: AGCTGCAGCACTCGACCTCCATCCTGCGCAAGCAGG...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCATGGTGCGGGCCGCATaGCGGGTTACCAGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFMVRAA*RVTRRP
Trigger: GGGGCGCCTGGTAACCCGCCATGCGGCCCGCACCAT...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCTTGTTCATCTGGTACTaGCGAAACGCCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPLFIWY*RNAVWM
Trigger: CATCCAGACGGCGTTTCGCCAGTACCAGATGAACAA...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCTTGTTCATCTGGTACTaGCGAAACGCCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: RPPGVPCVVCRCFREPGTLFIWY*RNAVWM
Trigger: CATCCAGACGGCGTTTCGCCAGTACCAGATGAACAA...GGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGAGCACTGGGACATGCTaGGCCGCACGACGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: AARGCGACRMAMERESFLSTGTC*AARRLS
Trigger: AGAAAGGCGTCGTGCGGCCCAGCATGTCCCAGTGCT...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGGAAATGCCACGCCAATaGGAGGACACAGGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: AARGCGACRMAMERESFLEMPRQ*EDTGGR
Trigger: CCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTC...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTCCGGGAAGGGCTCAGTaGGTTCCAGCAGTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGPGRAQ*VPAVPY
Trigger: GTAAGGAACTGCTGGAACCCACTGAGCCCTTCCCGG...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTCACATTCCCGGGGGTaGCGGGCTCCTCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GGGSSTLLGWLTVSRLMVSHSRG*RAPPGR
Trigger: CCTCCCTGGAGGAGCCCGCCACCCCCGGGAATGTGA...CACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp GAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCAGGGGCATAGTCTGGTGTaGGCGAGATGGACACTCTCG +
Preference number: 4 (lower is better)
Translates to: EHTECGGKPREGLSGFQQGHSLV*ARWTLS
Trigger: CGAGAGTGTCCATCTCGCCCACACCAGACTATGCCC...CTGCTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGGAAGTGCCCCGGGTTTaGTGTGCGGCTGGCGACCCC +
Preference number: 4 (lower is better)
Translates to: PGRNSLLKIARQSALGSLEVPRV*CAAGDP
Trigger: GGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp GGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGAGGACGTTATGGTGTTaGGGAGACGAGGATGAGAGC +
Preference number: 4 (lower is better)
Translates to: GEMATEVPRVWCAAGDPRRTLWC*GDEDES
Trigger: GCTCTCATCCTCGTCTCCCCAACACCATAACGTCCT...CCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCGATGGACTCGGCCAGTaGTTTCACTTGCCTAGAGAA +
Preference number: 4 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPDGLGQ*FHLPRE
Trigger: TTCTCTAGGCAAGTGAAATCACTGGCCGAGTCCATC...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCGGTTGGCTGAGCCATTaGTGGCCAAGTGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSGWLSH*WPSGCP
Trigger: TGGACAGCCACTTGGCCATCAATGGCTCAGCCAACC...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCGCTGTCACGGGACGATaGCTCGGAGCTGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLAVTGR*LGAAVD
Trigger: ATCAACTGCAGCTCCGAGTCATCGTCCCGTGACAGC...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCGCTTTTTCCCCACAATaGGCTTCTCCACCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPAFSPQ*ASPPSA
Trigger: TGCAGAAGGTGGAGAAGCTCATTGTGGGGAAAAAGC...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGCTTTTTCCCCACAATaGGCTTCTCCACCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GRDGNRSAPGLVCGWRPPAFSPQ*ASPPSA
Trigger: TGCAGAAGGTGGAGAAGCTCATTGTGGGGAAAAAGC...CGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGCGGGGACAGACGAGGTaGGCCGGATGCCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSERGQTR*AGCHWG
Trigger: ACCCCAATGGCATCCGGCTCACCTCGTCTGTCCCCG...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTAGTTTATTAACACTTTaGTATCTGCTCCGGGGACAG +
Preference number: 4 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCSLLTL*YLLRGQ
Trigger: CTGTCCCCGGAGCAGATATCAAAGTGTTAATAAACT...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGAGTTTATTAACACTTTaGTATCTGCTCCGGGGACAG +
Preference number: 4 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRSLLTL*YLLRGQ
Trigger: CTGTCCCCGGAGCAGATATCAAAGTGTTAATAAACT...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGAAATTTCTTCCGGTCTTaGGGGTTGGGGGCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: EDSATGWQPEAVELAGWRNFFRS*GLGALK
Trigger: CTTCAACGCCCCCAACCCTCAAGACCGGAAGAAATT...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGACCCGCAGGTCATCGGTaGATTTCTTCCGGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGPAGHR*ISSGLE
Trigger: CTCAAGACCGGAAGAAATTCACCGATGACCTGCGGG...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCCCGCAGAGTCAGGCGTaGGCTTCGCCCTTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLPQSQA*ASPFLK
Trigger: TTTCAGAAAGGGCGAAGCTCACGCCTGACTCTGCGG...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCAGAGGGTGGGAGGGATGTaGGGAGGGAAATCGGCAAAA +
Preference number: 4 (lower is better)
Translates to: EHTECGGKPREGLSGFQQRVGGM*GGKSAK
Trigger: TTTTGCCGATTTCCCTCCTCACATCCCTCCCACCCT...CTGCTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGACCGAAGCTGTGGCTCTaGCAGGTGGGATCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGPKLWL*QVGSLK
Trigger: CTTTAGAGATCCCACCTGTCAGAGCCACAGCTTCGG...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GTGGGTGACTCGGGCACAGACCTGCCGCGTGCAGGTCTGGCCCTGGGGAGCGCACTTTCATGTTGGAGATaGACACTTCTGCCGTGTATG +
Preference number: 4 (lower is better)
Translates to: VGDSGTDLPRAGLALGSALSCWR*TLLPCM
Trigger: CATACACGGCAGAAGTGTTCATCTCCAACATGAAAG...TGCGCTCCCCAGGGCCAGACCTGCACGCGGCAGGTCTGTGCCCGAGTCACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp GGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTCTGAGGCAGGTCCGACTCGGTaGTGGACGGCCGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GSSTLLGWLTVSRLMVSEAGPTR*WTAGPL
Trigger: CAGGGGACCGGCCGTCCAGCACCGAGTCGGACCTGC...CTCAGACACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR GCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCAGTCCGACTCAGACTTaGTCTGCCGGTTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSSPTQT*SAGWLS
Trigger: GCTCAGCCAACCGGCAGAGCAAGTCTGAGTCGGACT...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAAGCTTCTCCACCTTCTaGACCTGGGACACATGGTCC +
Preference number: 4 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGSFSTF*TWDTWS
Trigger: GGACCATGTGTCCCAGGTGCAGAAGGTGGAGAAGCT...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCTCCGACTCTATCCTGTaGTTCTCCATCTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: RPPGVPCVVCRCFREPGTSDSIL*FSISWT
Trigger: AGTCCAAGAGATGGAGAAGCACAGGATAGAGTCGGA...GGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCTCCCCTCTCCTCCTaGCGTCCGGCCACGGCTCAC +
Preference number: 4 (lower is better)
Translates to: DACCVQSRCDCTQKGDADAPLSS*RPATAH
Trigger: GTGAGCCGTGGCCGGACGGCAGGAGGAGAGGGGAGC...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCAAGGAACACACTGAGTaGGGCGGGAAACCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSKEHTE*GGKPRE
Trigger: TTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCACAAGAGGCTCCTGCTaGATGCAGTGTGTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: RTHRGQCHRLAARGCGACTRGSC*MQCVRE
Trigger: TTCCCTCACACACTGCATGCAGCAGGAGCCTCTTGT...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCGGACCTGATTCTAATTaGTTAAAACAACTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPGPDSN*LKQLGG
Trigger: GCCTCCGAGTTGTTTTAAGCAATTAGAATCAGGTCC...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGATGGACCCTTCCACATTaGTCTCTAGCGATCCCGCAC +
Preference number: 4 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGWTLPH*SLAIPH
Trigger: GTGCGGGATCGCTAGAGAGCAATGTGGAAGGGTCCA...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGACCCTGTGGCTTCTaGACAACCTTGCGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLRPCGF*TTLRLP
Trigger: AGGCAGGCGCAAGGTTGTGCAGAAGCCACAGGGTCT...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR CCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGTCGAGTGCTGCAGCTTaGGCCTCCGCGTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSESSAAA*ASACAA
Trigger: AGCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGA...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGTTGTTCATCTGGTACTaGCGAAACGCCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: ERWQQKCPGFGVRLATPGLFIWY*RNAVWM
Trigger: CATCCAGACGGCGTTTCGCCAGTACCAGATGAACAA...CCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGGATGAAAATGGTGTCTaGGTTCCGGAATTGCCGCAC +
Preference number: 4 (lower is better)
Translates to: ERWQQKCPGFGVRLATPGDENGV*VPELPH
Trigger: GTGCGGCAATTCCGGAACCCAGACACCATTTTCATC...CCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCTTTCTGGGGCTTGTTTaGGTCTGGAACCTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: RPPGVPCVVCRCFREPGTFLGLV*VWNLKE
Trigger: CTCTTTGAGGTTCCAGACCCAAACAAGCCCCAGAAA...GGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp AGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTTGTAGTCCGAGTTTCTaGGGCTTGTTTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RWQQKCPGFGVRLATPGRCSPSF*GLFGSG
Trigger: TCCAGACCCAAACAAGCCCCAGAAACTCGGACTACA...ACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGTGTAGTCCGAGTTTCTaGGGCTTGTTTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GRDGNRSAPGLVCGWRPPCSPSF*GLFGSG
Trigger: TCCAGACCCAAACAAGCCCCAGAAACTCGGACTACA...CGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGAGGAAGATTTCTCGCTaGTGTAGTCCGAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVRKISR*CSPSFW
Trigger: CCAGAAACTCGGACTACACCAGCGAGAAATCTTCCT...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCCTTGGACTTCCGCAATaGACTCCCGCAGGTCATCGG +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSLGLPQ*TPAGHR
Trigger: CCGATGACCTGCGGGAGTCCATTGCGGAAGTCCAAG...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCGAGACAGAGTGCTTTaGGGAGCCTGGCTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPRDRVL*GAWLLK
Trigger: TTTTAAAAGCCAGGCTCCCCAAAGCACTCTGTCTCG...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCCTCAAAGGTACACAGTaGGGGTGCCAGGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: RTHRGQCHRLAARGCGACLKGTQ*GCQASC
Trigger: ACAAGAAGCCTGGCACCCCCACTGTGTACCTTTGAG...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGTGCCAGTCTCACTGCTaGGGGCCTCGCCCTCGACGA +
Preference number: 4 (lower is better)
Translates to: PGRNSLLKIARQSALGSLCQSHC*GPRPRR
Trigger: TCGTCGAGGGCGAGGCCCCCAGCAGTGAGACTGGCA...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGGGCTTCGGCCTGGTGTaGGTTGGAGGCGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSEGFGLV*VGGGMR
Trigger: CCTCATCCCGCCTCCAACCCACACCAGGCCGAAGCC...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCCGGTGGAGGAGCGAGTaGCCAAGGGGCCCACCACCA +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFRWRSE*PRGPPP
Trigger: TGGTGGTGGGCCCCTTGGCCACTCGCTCCTCCACCG...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646269.1
3UTR CAA 72 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTaGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: TVPQAGSPRLWS*QDGDGEGEFPE
Trigger: TTCAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGGTGAGCGTGAGCGCTTaGTGGCCTCCTCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PGRNSLLKIARQSALGSLVSVSA*WPPPQP
Trigger: AGGCTGAGGAGGAGGCCATCAAGCGCTCACGCTCAC...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGGGGTGGTGGGCTCGCTaGGGTCACCACACTCAGGGG +
Preference number: 4 (lower is better)
Translates to: VQSRCDCTQKGDADASEWGWWAR*GHHTQG
Trigger: CCCCTGAGTGTGGTGACCTCAGCGAGCCCACCACCC...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CCAAAGAAATGCCACGCCAATGGGAGGACACAGGTGGGCGGGTTAAAGTCACATGGGTGGTGGGCTCGCTaGGGTCACCACACTCAGGGG +
Preference number: 4 (lower is better)
Translates to: PKKCHANGRTQVGGLKSHGWWAR*GHHTQG
Trigger: CCCCTGAGTGTGGTGACCTCAGCGAGCCCACCACCC...ATGTGACTTTAACCCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTACTCTGCCTCTTGAGTaGCCCCCGCTCCGAGCGGTC +
Preference number: 4 (lower is better)
Translates to: WGRQFNTTWLAHRFKADGTLPLE*PPLRAV
Trigger: GACCGCTCGGAGCGGGGGTCACTCAAGAGGCAGAGT...ACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR TCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCAGTTTATTAACACTTTaGTATCTGCTCCGGGGACAG +
Preference number: 4 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAASLLTL*YLLRGQ
Trigger: CTGTCCCCGGAGCAGATATCAAAGTGTTAATAAACT...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCTCTACACAATTGTGCTaGTGCCGCTGGGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATSTQLC*CRWVWP
Trigger: AGGCCAAACCCAGCGGCATCAGCACAATTGTGTAGA...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR TCA 90 bp AGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTTGTAACCAGCTGTCCTaGGTTGCTACTGTAGAGTGT +
Preference number: 4 (lower is better)
Translates to: RWQQKCPGFGVRLATPGRCNQLS*VATVEC
Trigger: ACACTCTACAGTAGCAACTCAGGACAGCTGGTTACA...ACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCCAATCCGGCGTGACATaGGGTTCTCTGACATGGAGC +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSQSGVT*GSLTWS
Trigger: GCTCCATGTCAGAGAACCGCATGTCACGCCGGATTG...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCCAATCCGGCGTGACATaGGGTTCTCTGACATGGAGC +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLQSGVT*GSLTWS
Trigger: GCTCCATGTCAGAGAACCGCATGTCACGCCGGATTG...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCGCCAGTGATTTCACTTaGCTAGAGAAGGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATASDFT*LEKASS
Trigger: GGAGGACGCCTTCTCTAGGCAAGTGAAATCACTGGC...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR GCA 90 bp GGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGGTTTGCGGTGGTCCATaGCGTGCAGGGCTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GGGSSTLLGWLTVSRLMVVCGGP*RAGLSG
Trigger: CCCAGACAGCCCTGCACGGCATGGACCACCGCAAAC...CACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR GCA 90 bp CCAAAGAAATGCCACGCCAATGGGAGGACACAGGTGGGCGGGTTAAAGTCACATGTGAGCAGCGGCAGATaGTCCACCCGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PKKCHANGRTQVGGLKSHVSSGR*STRSRC
Trigger: GCAGCGGCTGCGGGTGGAGCATCTGCCGCTGCTCAC...ATGTGACTTTAACCCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTCTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGCAGCCGAGCCCGGGATaGAGGGATCCGATCGGCTTT +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSEQPSPG*RDPIGF
Trigger: AAAGCCGATCGGATCCCTGCATCCCGGGCTCGGCTG...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGACAAAGTGCTTGGTTTaGAGATTTGCTGGTACGGTG +
Preference number: 4 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVTKCLV*RFAGTV
Trigger: CACCGTACCAGCAAATCTGCAAACCAAGCACTTTGT...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAACAAGAGGCTCCTGCTaGATGCAGTGTGTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGTRGSC*MQCVRE
Trigger: TTCCCTCACACACTGCATGCAGCAGGAGCCTCTTGT...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGTCAGTGTTGCAATGCTaGCTTGACTATTGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: CPGFGVRLATPGRALCGVSVLQC*LDYCCY
Trigger: GTAACAACAATAGTCAAGGCAGCATTGCAACACTGA...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp GTGGGTGACTCGGGCACAGACCTGCCGCGTGCAGGTCTGGCCCTGGGGAGCGCATTCAAGGAAAGTGAGTaGCCAGAGTCACAACAAGTA +
Preference number: 4 (lower is better)
Translates to: VGDSGTDLPRAGLALGSAFKESE*PESQQV
Trigger: TACTTGTTGTGACTCTGGGCACTCACTTTCCTTGAA...TGCGCTCCCCAGGGCCAGACCTGCACGCGGCAGGTCTGTGCCCGAGTCACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCAGAGGAGGCACTGGCTaGCACAGGCCACTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFRGGTG*HRPLQG
Trigger: GCCCTGCAGTGGCCTGTGGCAGCCAGTGCCTCCTCT...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR CCA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATAGTGCAGGCACCACATaGCGGCCGCAGTGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: DACCVQSRCDCTQKGDADSAGTT*RPQWER
Trigger: CCGCTCCCACTGCGGCCGCCATGTGGTGCCTGCACT...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273221.8
CDS-3UTR CCA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGATCCGGGCTCAGGCTaGAACCGGGCACCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: DACCVQSRCDCTQKGDADDPGSG*NRAPRG
Trigger: GCCCCTTGGTGCCCGGTTCCAGCCTGAGCCCGGATC...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCTCGAGTGCTGCAGCTTaGGCCTCCGCGTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFSSAAA*ASACAA
Trigger: AGCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGA...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCACTGCATCCTCATGTTaGACAGCACAATCCGGCGTG +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATTASSC*TAQSGV
Trigger: CACGCCGGATTGTGCTGTCCAACATGAGGATGCAGT...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGCCATTGATGGCCAAGTaGCTGTCCAGGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PGRNSLLKIARQSALGSLPLMAK*LSRGLG
Trigger: CCCCAGGCCCCTGGACAGCCACTTGGCCATCAATGG...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCCGCTCGATGAGGTACTaGACTCCCTTCTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSRSMRY*TPFSGF
Trigger: GAAGCCTGAGAAGGGAGTCCAGTACCTCATCGAGCG...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGACACATGGTCCTCATTaGTCTTTAGCTCTCGCTTAC +
Preference number: 4 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVTHGPH*SLALAY
Trigger: GTAAGCGAGAGCTAAAGACCAATGAGGACCATGTGT...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCACACATGGTCCTCATTaGTCTTTAGCTCTCGCTTAC +
Preference number: 4 (lower is better)
Translates to: RPPGVPCVVCRCFREPGTTHGPH*SLALAY
Trigger: GTAAGCGAGAGCTAAAGACCAATGAGGACCATGTGT...GGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp AGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTAGGAAGATTTCTCGCTaGTGTAGTCCGAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RWQQKCPGFGVRLATPGRRKISR*CSPSFW
Trigger: CCAGAAACTCGGACTACACCAGCGAGAAATCTTCCT...ACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp GCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGGTTTGCAGATTTGCTaGTACGGTGATCTCAATGAT +
Preference number: 4 (lower is better)
Translates to: ATEVPRVWCAAGDPRACPGLQIC*YGDLND
Trigger: ATCATTGAGATCACCGTACCAGCAAATCTGCAAACC...AGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGGAGTTGGGCATAGTCTaGTGTGGGCGAGATGGACAC +
Preference number: 4 (lower is better)
Translates to: AARGCGACRMAMERESFLELGIV*CGRDGH
Trigger: GTGTCCATCTCGCCCACACCAGACTATGCCCAACTC...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp GAGTTGGGCATAGTCTGGTGTGGGCGAGATGGACACTCTCGTGTTGATGTAGCTGAAGTGCCCCGGGTTTaGTGTGCGGCTGGCGACCCC +
Preference number: 4 (lower is better)
Translates to: ELGIVWCGRDGHSRVDVAEVPRV*CAAGDP
Trigger: GGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC...AGCTACATCAACACGAGAGTGTCCATCTCGCCCACACCAGACTATGCCCAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR CCA 90 bp CTGGAGTGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGGCAGAGGGGAGAGATaGCAACAGAAGTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: LEWGRQFNTTWLAHRFKAGRGER*QQKCPG
Trigger: CCCGGGGCACTTCTGTTGCCATCTCTCCCCTCTGCC...AGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCACTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR CCA 90 bp AGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTCAGTTCAACACTACTTaGCTGGCTCACCGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: RWQQKCPGFGVRLATPGRQFNTT*LAHRFK
Trigger: CTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTG...ACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR CCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCATCAGCTGGAGATCTaGGTCTGGCCAACAGGGCAA +
Preference number: 4 (lower is better)
Translates to: KEHTECGGKPREGLSGFQHQLEI*VWPTGQ
Trigger: TTGCCCTGTTGGCCAGACCCAGATCTCCAGCTGATG...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCGCAGGCTGCGGCAGTTaGGGGCATCGTCGATGGACT +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFAGCGS*GHRRWT
Trigger: AGTCCATCGACGATGCCCTCAACTGCCGCAGCCTGC...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCTGGGTGGCTCGATGGTaGGCAGCGGCAGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFWVARW*AAADAP
Trigger: TGGAGCATCTGCCGCTGCTCACCATCGAGCCACCCA...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTAAGCACTCTGCCTCTTaGGTGACCCCCGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: WGRQFNTTWLAHRFKADGKHSAS*VTPAPS
Trigger: GCTCGGAGCGGGGGTCACTCAAGAGGCAGAGTGCTT...ACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR TCA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTGTCATTGTCACCGTCTaGGTAGTCCGACTCAGACTT +
Preference number: 4 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGVIVTV*VVRLRL
Trigger: AAGTCTGAGTCGGACTACTCAGACGGTGACAATGAC...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GAGTTGGGCATAGTCTGGTGTGGGCGAGATGGACACTCTCGTGTTGATGTAGCTGGTAGGTCTGCTTGCTaGGCGTCTGCTCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: ELGIVWCGRDGHSRVDVAGRSAC*ASAPAG
Trigger: GCCTGCGGGAGCAGACGCTCAGCAAGCAGACCTACC...AGCTACATCAACACGAGAGTGTCCATCTCGCCCACACCAGACTATGCCCAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR TCA 90 bp CCAAAGAAATGCCACGCCAATGGGAGGACACAGGTGGGCGGGTTAAAGTCACATGGTAGGTCTGCTTGCTaGGCGTCTGCTCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: PKKCHANGRTQVGGLKSHGRSAC*ASAPAG
Trigger: GCCTGCGGGAGCAGACGCTCAGCAAGCAGACCTACC...ATGTGACTTTAACCCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATCGGGGACAGACGAGGTaGGCCGGATGCCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: DACCVQSRCDCTQKGDADRGQTR*AGCHWG
Trigger: ACCCCAATGGCATCCGGCTCACCTCGTCTGTCCCCG...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGGAGCTTCGCCCTTTCTaGAAGGGCCTCCGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VQSRCDCTQKGDADASEWELRPF*KGLRLG
Trigger: GCCCAGGCGGAGGCCCTTTCAGAAAGGGCGAAGCTC...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGGTGATCTCAATGATATaGCCGAGGGTGGGAGGGATG +
Preference number: 4 (lower is better)
Translates to: AARGCGACRMAMERESFLVISMI*PRVGGM
Trigger: CATCCCTCCCACCCTCGGTCATATCATTGAGATCAC...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTCATGCTGTTTCTTTCTaGGCAGACACCAAAGAAATG +
Preference number: 4 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCHAVSF*ADTKEM
Trigger: CATTTCTTTGGTGTCTGCTCAGAAAGAAACAGCATG...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCGCTGCATGCAGTGTGTaGGGGAAAGATCACTGCACT +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSAACSV*GKDHCT
Trigger: AGTGCAGTGATCTTTCCCTCACACACTGCATGCAGC...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGGCTGCATGCAGTGTGTaGGGGAAAGATCACTGCACT +
Preference number: 4 (lower is better)
Translates to: AARGCGACRMAMERESFLAACSV*GKDHCT
Trigger: AGTGCAGTGATCTTTCCCTCACACACTGCATGCAGC...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCTTTGATTTCCCCACATaGTCACAACCATGGTTTTAC +
Preference number: 4 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAAFDFPT*SQPWFY
Trigger: GTAAAACCATGGTTGTGATCATGTGGGGAAATCAAA...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATACGCCGTCTGGATGGTaGGGGCCGCATGGCGGGTTA +
Preference number: 4 (lower is better)
Translates to: DACCVQSRCDCTQKGDADTPSGW*GPHGGL
Trigger: TAACCCGCCATGCGGCCCGCACCATCCAGACGGCGT...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCTCTCTGACATGGAGCTaGGCAAGCGCTCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLSLTWS*ASARSS
Trigger: AGAACTTCGAGCGCTTGCGCAGCTCCATGTCAGAGA...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGGCCAGTGATTTCACTTaGCTAGAGAAGGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KEHTECGGKPREGLSGFQASDFT*LEKASS
Trigger: GGAGGACGCCTTCTCTAGGCAAGTGAAATCACTGGC...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTTTGCGGTGGTCCATaGCGTGCAGGGCTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: WGRQFNTTWLAHRFKADGVCGGP*RAGLSG
Trigger: CCCAGACAGCCCTGCACGGCATGGACCACCGCAAAC...ACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR GCA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCTGCCCGCCAAGGCTaGGCTCGTAAGCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: DACCVQSRCDCTQKGDADAARQG*ARKHSA
Trigger: GGCAGAGTGCTTACGAGCGCAGCCTTGGCGGGCAGC...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CCAAAGAAATGCCACGCCAATGGGAGGACACAGGTGGGCGGGTTAAAGTCACATGACCATGCTTGGGACTaGCCTGCTGCCCGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: PKKCHANGRTQVGGLKSHDHAWD*PAARQG
Trigger: GCCTTGGCGGGCAGCAGGGCAGTCCCAAGCATGGTC...ATGTGACTTTAACCCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCTGCTTGCTGAGCGTCTaGTCCCGCAGGCTGTCACGG +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFCLLSV*SRRLSR
Trigger: CCGTGACAGCCTGCGGGAGCAGACGCTCAGCAAGCA...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCTCGAAGAGCAGGACCTaGATGCCGTACAAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLSKSRT*MPYKEK
Trigger: CTTCTCCTTGTACGGCATGCAGGTCCTGCTCTTCGA...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CCAAAGAAATGCCACGCCAATGGGAGGACACAGGTGGGCGGGTTAAAGTCACATCTAGCGATCCCGCACTaGTGCGACGCCCTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: PKKCHANGRTQVGGLKSHLAIPH*CDALAS
Trigger: GGAAGCGAGGGCGTCGCAGCAGTGCGGGATCGCTAG...ATGTGACTTTAACCCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGCTAGCGATCCCGCACTaGTGCGACGCCCTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: VQSRCDCTQKGDADASEWLAIPH*CDALAS
Trigger: GGAAGCGAGGGCGTCGCAGCAGTGCGGGATCGCTAG...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTGCTGAAATTCCACATTaGTCTCTAGCGATCCCGCAC +
Preference number: 4 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGAEIPH*SLAIPH
Trigger: GTGCGGGATCGCTAGAGAGCAATGTGGAATTTCAGC...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273221.8
ENST00000646269.1
CDS-3UTR GCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAAATTGCGAGACAGAGTaGTTTGGGGAGCCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGNCETE*FGEPGF
Trigger: AAAGCCAGGCTCCCCAAAGCACTCTGTCTCGCAATT...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGACAAGAGGCTCCTGCTaGATGCAGTGTGTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: AARGCGACRMAMERESFLTRGSC*MQCVRE
Trigger: TTCCCTCACACACTGCATGCAGCAGGAGCCTCTTGT...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGAACTGTAAGACTGTaGGTGCTTACCTGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLRTVRL*VLTCGH
Trigger: GTGCCCGCAGGTAAGCACGCACAGTCTTACAGTTCT...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGACACCCTGCTCAGTGTTaGAATGCTGCCTTGACTATT +
Preference number: 4 (lower is better)
Translates to: EDSATGWQPEAVELAGWRHPAQC*NAALTI
Trigger: AATAGTCAAGGCAGCATTGCAACACTGAGCAGGGTG...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTGGTACTGGTGTGCGTaGTGGATGTGCTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GGGSSTLLGWLTVSRLMVWYWCA*WMCWGG
Trigger: CCCACCCCAGCACATCCAGCACGCACACCAGTACCA...CACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR GCA 90 bp GGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGGTGGTGGTACTGGTGTaGGTGCTGGATGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GGGSSTLLGWLTVSRLMVVVVLV*VLDVLG
Trigger: CCCCAGCACATCCAGCACGCACACCAGTACCACCAC...CACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR GCA 90 bp CTGGAGTGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTTCTGCCGTGTATGGGTaGCCCTCTCGGAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: LEWGRQFNTTWLAHRFKASAVYG*PSRRTL
Trigger: CAGAGTCCTCCGAGAGGGGCACCCATACACGGCAGA...AGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCACTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp GCACTGACGGCTGCAGTGGCTCGAAAGGCTGAAACTACAAAGTATGGCCCGTGGCCTGCTTGCGCAGGATaGAGGTCGAGTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: ALTAAVARKAETTKYGPWPACAG*RSSAAA
Trigger: AGCTGCAGCACTCGACCTCCATCCTGCGCAAGCAGG...CCACGGGCCATACTTTGTAGTTTCAGCCTTTCGAGCCACTGCAGCCGTCAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTTTGTTCATCTGGTACTaGCGAAACGCCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGLFIWY*RNAVWM
Trigger: CATCCAGACGGCGTTTCGCCAGTACCAGATGAACAA...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTAGAGCTGTCGCTGGGTaGCTCGATGGTGAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: WGRQFNTTWLAHRFKADGRAVAG*LDGEQR
Trigger: CCGCTGCTCACCATCGAGCCACCCAGCGACAGCTCT...ACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR CCA 90 bp CCAAAGAAATGCCACGCCAATGGGAGGACACAGGTGGGCGGGTTAAAGTCACATTTGGGGGCGCCGCTGTaGGGACCATGCTTGGGACTG +
Preference number: 4 (lower is better)
Translates to: PKKCHANGRTQVGGLKSHLGAPL*GPCLGL
Trigger: CAGTCCCAAGCATGGTCCCCACAGCGGCGCCCCCAA...ATGTGACTTTAACCCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTCTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTGATGAAAATGGTGTCTaGGTTCCGGAATTGCCGCAC +
Preference number: 4 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGDENGV*VPELPH
Trigger: GTGCGGCAATTCCGGAACCCAGACACCATTTTCATC...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGTCCACCTTCTGCACCTaGGACACATGGTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: KEHTECGGKPREGLSGFQSTFCT*DTWSSL
Trigger: CAATGAGGACCATGTGTCCCAGGTGCAGAAGGTGGA...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGCAGACCAACCGACGGTaGGGCAGAGAGAGCACACAG +
Preference number: 4 (lower is better)
Translates to: PGRNSLLKIARQSALGSLQTNRR*GRESTQ
Trigger: CTGTGTGCTCTCTCTGCCCCACCGTCGGTTGGTCTG...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATTTCTGGGGCTTGTTTaGGTCTGGAACCTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: EDSATGWQPEAVELAGWRFLGLV*VWNLKE
Trigger: CTCTTTGAGGTTCCAGACCCAAACAAGCCCCAGAAA...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CTGGAGTGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTTTGAGGCTAGAGCACTaGGACATGCTGGGCCGCACG +
Preference number: 4 (lower is better)
Translates to: LEWGRQFNTTWLAHRFKALRLEH*DMLGRT
Trigger: CGTGCGGCCCAGCATGTCCCAGTGCTCTAGCCTCAA...AGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCACTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR CCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGTTGAGGCTAGAGCACTaGGACATGCTGGGCCGCACG +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSELRLEH*DMLGRT
Trigger: CGTGCGGCCCAGCATGTCCCAGTGCTCTAGCCTCAA...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGGAAATGCCACGCCAATaGGAGGACACAGGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: GGGSSTLLGWLTVSRLMVEMPRQ*EDTGGR
Trigger: CCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTC...CACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp TCACAGCTGACGCCAGATGACATGCAGCAGTTTAACGCTTCCAGGTCGGAACAGGACAGTGCCACAGGCTaGCAGCCCGAGGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SQLTPDDMQQFNASRSEQDSATG*QPEAVE
Trigger: CTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTC...CTGTTCCGACCTGGAAGCGTTAAACTGCTGCATGTCATCTGGCGTCAGCTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCTAGCATTTAGGGTTTaGTCTATTGTCTCACACACC +
Preference number: 4 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVLAFRV*SIVSHT
Trigger: GGTGTGTGAGACAATAGACCAAACCCTAAATGCTAG...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCTGCTCCAGACCCTCCTaGCCAAGCGGCCCTCACACA +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFCSRPS*PSGPHT
Trigger: TGTGTGAGGGCCGCTTGGCCAGGAGGGTCTGGAGCA...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR TCA 90 bp CCAAAGAAATGCCACGCCAATGGGAGGACACAGGTGGGCGGGTTAAAGTCACATCGTCCTCCAGCTCGGTaGTGGCGTCCGCAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: PKKCHANGRTQVGGLKSHRPPAR*WRPQSH
Trigger: GTGACTTTGCGGACGCCATCACCGAGCTGGAGGACG...ATGTGACTTTAACCCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCGCTTTTTCCCCACAATaGGCTTCTCCACCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLAFSPQ*ASPPSA
Trigger: TGCAGAAGGTGGAGAAGCTCATTGTGGGGAAAAAGC...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGGCGCAGCCTCACAGCTaGCGCCAGATGACATGCAGC +
Preference number: 4 (lower is better)
Translates to: VQSRCDCTQKGDADASEWAQPHS*RQMTCS
Trigger: GCTGCATGTCATCTGGCGTCAGCTGTGAGGCTGCGC...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCGCAGCCTCACAGCTaGCGCCAGATGACATGCAGC +
Preference number: 4 (lower is better)
Translates to: DACCVQSRCDCTQKGDADAQPHS*RQMTCS
Trigger: GCTGCATGTCATCTGGCGTCAGCTGTGAGGCTGCGC...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATCCTGAAGGAACACACTaGGTGCGGCGGGAAACCCCG +
Preference number: 4 (lower is better)
Translates to: DACCVQSRCDCTQKGDADPEGTH*VRRETP
Trigger: CGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGG...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGCGATGCAGATGCATCTaGATGGAGGGCAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSERCRCI*MEGRPP
Trigger: AGGAGGCCTGCCCTCCATTCAGATGCATCTGCATCG...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTAAGGCTGATGGTGTCTaGGGCCCACCCATCCCTCAG +
Preference number: 4 (lower is better)
Translates to: WGRQFNTTWLAHRFKADGKADGV*GPPIPQ
Trigger: CTGAGGGATGGGTGGGCCTCAGACACCATCAGCCTT...ACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR GCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTGCTTGGGCCTCCGCGTaGGCTGCTGTTGCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: CPLKSLNSLGIQDLILIAAWASA*AAVAPA
Trigger: CGCCGGGGCAACAGCAGCGCACGCGGAGGCCCAAGC...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CCAAAGAAATGCCACGCCAATGGGAGGACACAGGTGGGCGGGTTAAAGTCACATGTTTGCGGTGGTCCATaGCGTGCAGGGCTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: PKKCHANGRTQVGGLKSHVCGGP*RAGLSG
Trigger: CCCAGACAGCCCTGCACGGCATGGACCACCGCAAAC...ATGTGACTTTAACCCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTGGACGGCCGGTCCCCTaGCTGCGAGAGGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CPLKSLNSLGIQDLILIAGRPVP*LREGQR
Trigger: CCTCTGCCCCTCTCGCAGGCAGGGGACCGGCCGTCC...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATTGCTTGCTGAGCGTCTaGTCCCGCAGGCTGTCACGG +
Preference number: 4 (lower is better)
Translates to: DACCVQSRCDCTQKGDADCLLSV*SRRLSR
Trigger: CCGTGACAGCCTGCGGGAGCAGACGCTCAGCAAGCA...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCGAGTCCCAGCTGTTaGGGGCCTCCTTGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: DACCVQSRCDCTQKGDADASPSC*GPPCGR
Trigger: CCTACCACAAGGAGGCCCGCAACAGCTGGGACTCGC...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTTCTGGGTTCCGGAATTaGCGCACCACCCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: WGRQFNTTWLAHRFKADGSGFRN*RTTPGL
Trigger: CAACCCTGGGGTGGTGCGGCAATTCCGGAACCCAGA...ACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR GCA 90 bp GAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCAGTTTTCCAAGAGGAGATaGATGCTGTGTGCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: EHTECGGKPREGLSGFQQFSKRR*MLCAVS
Trigger: CGAGACTGCACACAGCATGCATCTCCTCTTGGAAAA...CTGCTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTTTTTCCAAGAGGAGATaGATGCTGTGTGCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGFSKRR*MLCAVS
Trigger: CGAGACTGCACACAGCATGCATCTCCTCTTGGAAAA...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTACCAGGGCTCCCAGCTaGGAGCCGTCGTTAGTCACT +
Preference number: 4 (lower is better)
Translates to: WGRQFNTTWLAHRFKADGTRAPS*EPSLVT
Trigger: AGTGACTAACGACGGCTCCCAGCTGGGAGCCCTGGT...ACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR CCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCACCAGGGCTCCCAGCTaGGAGCCGTCGTTAGTCACT +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFTRAPS*EPSLVT
Trigger: AGTGACTAACGACGGCTCCCAGCTGGGAGCCCTGGT...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCGATGAAAATGGTGTCTaGGTTCCGGAATTGCCGCAC +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLDENGV*VPELPH
Trigger: GTGCGGCAATTCCGGAACCCAGACACCATTTTCATC...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGGATGAAAATGGTGTCTaGGTTCCGGAATTGCCGCAC +
Preference number: 4 (lower is better)
Translates to: KEHTECGGKPREGLSGFQDENGV*VPELPH
Trigger: GTGCGGCAATTCCGGAACCCAGACACCATTTTCATC...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCTGCACCTGGGACACATaGTCCTCATTGGTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLCTWDT*SSLVFS
Trigger: GCTAAAGACCAATGAGGACCATGTGTCCCAGGTGCA...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCCAGACCAACCGACGGTaGGGCAGAGAGAGCACACAG +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFQTNRR*GRESTQ
Trigger: CTGTGTGCTCTCTCTGCCCCACCGTCGGTTGGTCTG...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGTAGTCCGAGTTTCTaGGGCTTGTTTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSCSPSF*GLFGSG
Trigger: TCCAGACCCAAACAAGCCCCAGAAACTCGGACTACA...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCAGGAAGATTTCTCGCTaGTGTAGTCCGAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATRKISR*CSPSFW
Trigger: CCAGAAACTCGGACTACACCAGCGAGAAATCTTCCT...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CCA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGAGTCCTCGGGTCCCATaGCTTAGGAGCACAGCACTG +
Preference number: 4 (lower is better)
Translates to: PGRNSLLKIARQSALGSLSPRVP*LRSTAL
Trigger: CAGTGCTGTGCTCCTAAGCCATGGGACCCGAGGACT...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGAAATCGGCAAAACCCTaGCCAGCCAGCCAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PGRNSLLKIARQSALGSLKSAKP*PASQPR
Trigger: CCTTGGCTGGCTGGCTGGCCAGGGTTTTGCCGATTT...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGCCGGGAAGGGCTCAGTaGGTTCCAGCAGTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: PGRNSLLKIARQSALGSLPGRAQ*VPAVPY
Trigger: GTAAGGAACTGCTGGAACCCACTGAGCCCTTCCCGG...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCGACGAGGATGAGAGCTaGTCACTTTCATGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATDEDES*SLSCWR
Trigger: TCTCCAACATGAAAGTGACCAGCTCTCATCCTCGTC...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCGCCGTCGTTAGTCACTaGGACCTGCTTCCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFAVVSH*DLLPLE
Trigger: TTCGAGGGGAAGCAGGTCTCAGTGACTAACGACGGC...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCTTAGGAGCACAGCACTaGCGGCTGCAGTGGCTCGAA +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFLGAQH*RLQWLE
Trigger: TTCGAGCCACTGCAGCCGTCAGTGCTGTGCTCCTAA...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGAGAGGGAGAGTTTCCTaGAAGCCCCTCCTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: PGRNSLLKIARQSALGSLRGRVS*KPLLGF
Trigger: AAACCCCAGGAGGGGCTTTCAGGAAACTCTCCCTCT...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CCAAAGAAATGCCACGCCAATGGGAGGACACAGGTGGGCGGGTTAAAGTCACATAGCTTCCCGTGGCGCTaGGTCAACACCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: PKKCHANGRTQVGGLKSHSFPWR*VNTQHQ
Trigger: CTGATGCTGGGTGTTGACTCAGCGCCACGGGAAGCT...ATGTGACTTTAACCCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTCTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCGTGCCAGGCTTCTTGTaGGGGAGGTGTCCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFVPGFL*GRCPLK
Trigger: CTTCAAGGGACACCTCCCTCACAAGAAGCCTGGCAC...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTCTGAGAAGGCTGATGGTGTCTaGGGCCCACCCATCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GSSTLLGWLTVSRLMVSEKADGV*GPPIPQ
Trigger: CTGAGGGATGGGTGGGCCTCAGACACCATCAGCCTT...CTCAGACACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR TCA 90 bp GGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGGATGAAAACACTCTCTaGGGGCTTCGGCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GGGSSTLLGWLTVSRLMVDENTL*GLRPGV
Trigger: CACACCAGGCCGAAGCCCTCAGAGAGTGTTTTCATC...CACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp TCACAGCTGACGCCAGATGACATGCAGCAGTTTAACGCTTCCAGGTCGGAACAGCCTCCTCAGCCTGCTTaGGCAGGATGGAGGTCGAGT +
Preference number: 4 (lower is better)
Translates to: SQLTPDDMQQFNASRSEQPPQPA*AGWRSS
Trigger: ACTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGG...CTGTTCCGACCTGGAAGCGTTAAACTGCTGCATGTCATCTGGCGTCAGCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GCTGGAGATCTGGGTCTGGCCAACAGGGCAACTTCTGGACTTTTCAGAAAAAGTCGCATCCAGGGCCGGTaGCTCCTCAGTGTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: AGDLGLANRATSGLFRKSRIQGR*LLSVQA
Trigger: AGCCTGCACACTGAGGAGGCACCGGCCCTGGATGCG...ACTTTTTCTGAAAAGTCCAGAAGTTGCCCTGTTGGCCAGACCCAGATCTCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp ACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGCAGGTCCGACTCGGTaGTGGACGGCCGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TATLQKEQFCAKRPESFLAGPTR*WTAGPL
Trigger: CAGGGGACCGGCCGTCCAGCACCGAGTCGGACCTGC...CAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GGACGTTATGGTGTTGGGGAGACGAGGATGAGAGCTGGTCACTTTCATGTTGGATGCTTGCTGAGCGTCTaGTCCCGCAGGCTGTCACGG +
Preference number: 4 (lower is better)
Translates to: GRYGVGETRMRAGHFHVGCLLSV*SRRLSR
Trigger: CCGTGACAGCCTGCGGGAGCAGACGCTCAGCAAGCA...TCCAACATGAAAGTGACCAGCTCTCATCCTCGTCTCCCCAACACCATAACGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGTCTGGGTTCCGGAATTaGCGCACCACCCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: VQSRCDCTQKGDADASEWSGFRN*RTTPGL
Trigger: CAACCCTGGGGTGGTGCGGCAATTCCGGAACCCAGA...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTCGCACGACGCCTTTCTaGTTCTCGAGCTCCGACTCT +
Preference number: 4 (lower is better)
Translates to: WGRQFNTTWLAHRFKADGRTTPF*FSSSDS
Trigger: AGAGTCGGAGCTCGAGAAGCAGAAAGGCGTCGTGCG...ACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR GCA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGACTTGGTTTGCAGATTTaGTGGTACGGTGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: EDSATGWQPEAVELAGWRLGLQI*WYGDLN
Trigger: ATTGAGATCACCGTACCAGCAAATCTGCAAACCAAG...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGACACGCCAATACATTTTaGAAACGCACAACACGCAGA +
Preference number: 4 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGHANTF*KRTTRR
Trigger: TCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTG...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCCACCCTGCTCAGTGTTaGAATGCTGCCTTGACTATT +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSHPAQC*NAALTI
Trigger: AATAGTCAAGGCAGCATTGCAACACTGAGCAGGGTG...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CCAAAGAAATGCCACGCCAATGGGAGGACACAGGTGGGCGGGTTAAAGTCACATCTCCCTCTTGTCCTGTaGTCAGCACCCCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: PKKCHANGRTQVGGLKSHLPLVL*SAPPPH
Trigger: GTGAGGTGGGGGTGCTGAGCACAGGACAAGAGGGAG...ATGTGACTTTAACCCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTCTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCGGACCTGATTCTAATTaGTTAAAACAACTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RTHRGQCHRLAARGCGACGPDSN*LKQLGG
Trigger: GCCTCCGAGTTGTTTTAAGCAATTAGAATCAGGTCC...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TCACAGCTGACGCCAGATGACATGCAGCAGTTTAACGCTTCCAGGTCGGAACAGGGCTCCACACGGCACTaGCATACCCCTTCATGCCTG +
Preference number: 4 (lower is better)
Translates to: SQLTPDDMQQFNASRSEQGSTRH*HTPSCL
Trigger: CAGGCATGAAGGGGTATGGCAGTGCCGTGTGGAGCC...CTGTTCCGACCTGGAAGCGTTAAACTGCTGCATGTCATCTGGCGTCAGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR CCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCAGCTCCAGAAGGGACTaGGTCCTCTCCGAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFSSRRD*VLSELQ
Trigger: CTGCAACTCGGAGAGGACCCAGTCCCTTCTGGAGCT...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273221.8
CDS-3UTR CCA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATTCGTCCAGTTTGCGGTaGTCCATGCCGTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: DACCVQSRCDCTQKGDADSSSLR*SMPCRA
Trigger: AGCCCTGCACGGCATGGACCACCGCAAACTGGACGA...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGCGCTCGATGAGGTACTaGACTCCCTTCTCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: PGRNSLLKIARQSALGSLRSMRY*TPFSGF
Trigger: GAAGCCTGAGAAGGGAGTCCAGTACCTCATCGAGCG...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp ACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGCGCTGCAGCAGGAAGTaGGCCACCCCGACGGGCGTG +
Preference number: 4 (lower is better)
Translates to: TATLQKEQFCAKRPESFLRCSRK*ATPTGV
Trigger: CACGCCCGTCGGGGTGGCCCACTTCCTGCTGCAGCG...CAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGCAGACCAACCGACGGTaGGGCAGAGAGAGCACACAG +
Preference number: 4 (lower is better)
Translates to: VQSRCDCTQKGDADASEWQTNRR*GRESTQ
Trigger: CTGTGTGCTCTCTCTGCCCCACCGTCGGTTGGTCTG...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGAGGAAGATTTCTCGCTaGTGTAGTCCGAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: KEHTECGGKPREGLSGFQRKISR*CSPSFW
Trigger: CCAGAAACTCGGACTACACCAGCGAGAAATCTTCCT...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCAAAGAAATGCCACGCCAATGGGAGGACACAGGTGGGCGGGTTAAAGTCACATTTGAGGCTAGAGCACTaGGACATGCTGGGCCGCACG +
Preference number: 4 (lower is better)
Translates to: PKKCHANGRTQVGGLKSHLRLEH*DMLGRT
Trigger: CGTGCGGCCCAGCATGTCCCAGTGCTCTAGCCTCAA...ATGTGACTTTAACCCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTCTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGGAAATGCCACGCCAATaGGAGGACACAGGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: VQSRCDCTQKGDADASEWEMPRQ*EDTGGR
Trigger: CCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTC...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGGTGGAGCTTGCAGGATaGCGATGGAGAGGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSEVELAG*RWRGRV
Trigger: AACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCAC...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGGAGTTGGGCATAGTCTaGTGTGGGCGAGATGGACAC +
Preference number: 4 (lower is better)
Translates to: GGGSSTLLGWLTVSRLMVELGIV*CGRDGH
Trigger: GTGTCCATCTCGCCCACACCAGACTATGCCCAACTC...CACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR CCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCGAAAAGAGGAGGCACTaGCTGCCACAGGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFEKRRH*LPQATA
Trigger: TGCAGTGGCCTGTGGCAGCCAGTGCCTCCTCTTTTC...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR TCA 90 bp GGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTCTGAGCCCATAGGCTCCCACTaGCGTGTGCTCGTAGTGATC +
Preference number: 4 (lower is better)
Translates to: GSSTLLGWLTVSRLMVSEPIGSH*RVLVVI
Trigger: GATCACTACGAGCACACGTCAGTGGGAGCCTATGGG...CTCAGACACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR TCA 90 bp GCTGGAGATCTGGGTCTGGCCAACAGGGCAACTTCTGGACTTTTCAGAAAAAGTCGTCCTCCAGCTCGGTaGTGGCGTCCGCAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: AGDLGLANRATSGLFRKSRPPAR*WRPQSH
Trigger: GTGACTTTGCGGACGCCATCACCGAGCTGGAGGACG...ACTTTTTCTGAAAAGTCCAGAAGTTGCCCTGTTGGCCAGACCCAGATCTCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCTGTCACGGGACGATaGCTCGGAGCTGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: DACCVQSRCDCTQKGDADAVTGR*LGAAVD
Trigger: ATCAACTGCAGCTCCGAGTCATCGTCCCGTGACAGC...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTCAAAGCCACGCTCGATaGGGTACTGGACTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: WGRQFNTTWLAHRFKADGQSHAR*GTGLPS
Trigger: AGAAGGGAGTCCAGTACCTCATCGAGCGTGGCTTTG...ACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR TCA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGCCACCAGGAGGTCGTTaGACAGGAAGATTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: PGRNSLLKIARQSALGSLPPGGR*TGRFLA
Trigger: AGCGAGAAATCTTCCTGTTCAACGACCTCCTGGTGG...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGCAGCTGAGAGTCATGTaGTGCCCTGGCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: VQSRCDCTQKGDADASEWQLRVM*CPGSSL
Trigger: CAGTGAGCTGCCAGGGCATCACATGACTCTCAGCTG...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCCGCATCCAGGGCCGGTaGCTCCTCAGTGTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DVFTVTPIHFANAQHAERRIQGR*LLSVQA
Trigger: AGCCTGCACACTGAGGAGGCACCGGCCCTGGATGCG...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCCGGTGGTCCATGCCGTaGAGGGCTGTCTGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: DVFTVTPIHFANAQHAERRWSMP*RAVWGS
Trigger: CGAACCCCAGACAGCCCTGCACGGCATGGACCACCG...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGGCTCCAGCGACGGCGTaGTCCGGCAGCTCGTGTCCG +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQAPATA*SGSSCP
Trigger: CGGACACGAGCTGCCGGAGCACGCCGTCGCTGGAGC...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGTCCACCCGCAGCCGCTaGTCCTGCCGCTCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQSTRSR*SCRSSD
Trigger: GTCGCTGGAGCGGCAGGAGCAGCGGCTGCGGGTGGA...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TCACAGCTGACGCCAGATGACATGCAGCAGTTTAACGCTTCCAGGTCGGAACAGAGAGGTTCAGGCCGATaGGGTAGTGCCTCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: SQLTPDDMQQFNASRSEQRGSGR*GSASCG
Trigger: TCCGCAAGAGGCACTACCGCATCGGCCTGAACCTCT...CTGTTCCGACCTGGAAGCGTTAAACTGCTGCATGTCATCTGGCGTCAGCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGCGCACGACGCCTTTCTaGTTCTCGAGCTCCGACTCT +
Preference number: 4 (lower is better)
Translates to: VQSRCDCTQKGDADASEWRTTPF*FSSSDS
Trigger: AGAGTCGGAGCTCGAGAAGCAGAAAGGCGTCGTGCG...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCACAAAGTGCTTGGTTTaGAGATTTGCTGGTACGGTG +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSTKCLV*RFAGTV
Trigger: CACCGTACCAGCAAATCTGCAAACCAAGCACTTTGT...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCGTTCCTATTCATTACTaGTACCCTTCAGAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RTHRGQCHRLAARGCGACVPIHY*YPSERA
Trigger: TGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAAC...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGAGAACTGTAAGACTGTaGGTGCTTACCTGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSERTVRL*VLTCGH
Trigger: GTGCCCGCAGGTAAGCACGCACAGTCTTACAGTTCT...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGATGCTCAGTGTTGCAATaGTGCCTTGACTATTGTTGT +
Preference number: 4 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGCSVLQ*CLDYCC
Trigger: ACAACAATAGTCAAGGCAGCATTGCAACACTGAGCA...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGACCCCCACCTCACCCTaGTCAGTGTTGCAATGCTGC +
Preference number: 4 (lower is better)
Translates to: VQSRCDCTQKGDADASEWTPTSP*SVLQCC
Trigger: GCAGCATTGCAACACTGAGCAGGGTGAGGTGGGGGT...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TCACAGCTGACGCCAGATGACATGCAGCAGTTTAACGCTTCCAGGTCGGAACAGTGCGGTTCTCTGACATaGAGCTGCGCAAGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: SQLTPDDMQQFNASRSEQCGSLT*SCASAR
Trigger: TCGAGCGCTTGCGCAGCTCCATGTCAGAGAACCGCA...CTGTTCCGACCTGGAAGCGTTAAACTGCTGCATGTCATCTGGCGTCAGCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGACTGCATCCTCATGTTaGACAGCACAATCCGGCGTG +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSETASSC*TAQSGV
Trigger: CACGCCGGATTGTGCTGTCCAACATGAGGATGCAGT...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CTGGAGTGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTACTGCATCCTCATGTTaGACAGCACAATCCGGCGTG +
Preference number: 4 (lower is better)
Translates to: LEWGRQFNTTWLAHRFKATASSC*TAQSGV
Trigger: CACGCCGGATTGTGCTGTCCAACATGAGGATGCAGT...AGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCACTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR CCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTCACCACGCTGTCCACTaGGAACGCGGCCCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVHHAVH*ERGPAA
Trigger: GGCCGCGGGGCCGCGTTCCCAGTGGACAGCGTGGTG...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TCACAGCTGACGCCAGATGACATGCAGCAGTTTAACGCTTCCAGGTCGGAACAGCACCTCGCTGCTACCTaGGCCCACCTTGGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: SQLTPDDMQQFNASRSEQHLAAT*AHLGVF
Trigger: AAAAACCCCAAGGTGGGCCCAGGTAGCAGCGAGGTG...CTGTTCCGACCTGGAAGCGTTAAACTGCTGCATGTCATCTGGCGTCAGCTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGGCTGGGTGGCCCCCATaGGGGCCGTGGTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQAGWPP*GPWWYW
Trigger: CCAGTACCACCACGGCCCCCATGGGGGCCACCCAGC...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp CTGGAGTGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGTCATTGTCACCGTCTaGGTAGTCCGACTCAGACTT +
Preference number: 4 (lower is better)
Translates to: LEWGRQFNTTWLAHRFKAVIVTV*VVRLRL
Trigger: AAGTCTGAGTCGGACTACTCAGACGGTGACAATGAC...AGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCACTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR TCA 90 bp CCAAAGAAATGCCACGCCAATGGGAGGACACAGGTGGGCGGGTTAAAGTCACATCAAAGCCACGCTCGATaGGGTACTGGACTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PKKCHANGRTQVGGLKSHQSHAR*GTGLPS
Trigger: AGAAGGGAGTCCAGTACCTCATCGAGCGTGGCTTTG...ATGTGACTTTAACCCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp ACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAGCTTCGCCCTTTCTaGAAGGGCCTCCGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TATLQKEQFCAKRPESFLELRPF*KGLRLG
Trigger: GCCCAGGCGGAGGCCCTTTCAGAAAGGGCGAAGCTC...CAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CCAAAGAAATGCCACGCCAATGGGAGGACACAGGTGGGCGGGTTAAAGTCACATAGAGGGAGAGTTTCCTaGAAGCCCCTCCTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: PKKCHANGRTQVGGLKSHRGRVS*KPLLGF
Trigger: AAACCCCAGGAGGGGCTTTCAGGAAACTCTCCCTCT...ATGTGACTTTAACCCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTCAAACAGAATGCAGATaGAAACAAACGCACTCCTTT +
Preference number: 4 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGQTECR*KQTHSF
Trigger: AAAGGAGTGCGTTTGTTTTCATCTGCATTCTGTTTG...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTTCTACACAATTGTGCTaGTGCCGCTGGGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: WGRQFNTTWLAHRFKADGSTQLC*CRWVWP
Trigger: AGGCCAAACCCAGCGGCATCAGCACAATTGTGTAGA...ACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR TCA 90 bp GGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTCTGAGCGACAAGAGCACAGCTaGGAGTCATGTGATGCCCTG +
Preference number: 4 (lower is better)
Translates to: GSSTLLGWLTVSRLMVSERQEHS*ESCDAL
Trigger: CAGGGCATCACATGACTCTCAGCTGTGCTCTTGTCG...CTCAGACACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCTCTCTGACATGGAGCTaGGCAAGCGCTCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFSLTWS*ASARSS
Trigger: AGAACTTCGAGCGCTTGCGCAGCTCCATGTCAGAGA...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCTCCAGCGACGGCGTaGTCCGGCAGCTCGTGTCCG +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTAPATA*SGSSCP
Trigger: CGGACACGAGCTGCCGGAGCACGCCGTCGCTGGAGC...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGTCCACCCGCAGCCGCTaGTCCTGCCGCTCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTSTRSR*SCRSSD
Trigger: GTCGCTGGAGCGGCAGGAGCAGCGGCTGCGGGTGGA...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCGTTCCTATTCATTACTaGTACCCTTCAGAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATVPIHY*YPSERA
Trigger: TGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAAC...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTTCAGTGTTGCAATGCTaGCTTGACTATTGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGSVLQC*LDYCCY
Trigger: GTAACAACAATAGTCAAGGCAGCATTGCAACACTGA...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGCCAGCTGTCCTGAGTTaGTACTGTAGAGTGTACTGC +
Preference number: 4 (lower is better)
Translates to: PGRNSLLKIARQSALGSLPAVLS*YCRVYC
Trigger: GCAGTACACTCTACAGTAGCAACTCAGGACAGCTGG...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGGATCCGGGCTCAGGCTaGAACCGGGCACCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQDPGSG*NRAPRG
Trigger: GCCCCTTGGTGCCCGGTTCCAGCCTGAGCCCGGATC...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCACTGCATCCTCATGTTaGACAGCACAATCCGGCGTG +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFTASSC*TAQSGV
Trigger: CACGCCGGATTGTGCTGTCCAACATGAGGATGCAGT...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGGTCCGACTCGGTGCTaGACGGCCGGTCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTGPTRC*TAGPLP
Trigger: AGGCAGGGGACCGGCCGTCCAGCACCGAGTCGGACC...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTTCCACCTTCTGCACCTaGGACACATGGTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: WGRQFNTTWLAHRFKADGSTFCT*DTWSSL
Trigger: CAATGAGGACCATGTGTCCCAGGTGCAGAAGGTGGA...ACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR CCA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGGGCTTGTTTGGGTCTaGAACCTCAAAGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: DACCVQSRCDCTQKGDADGLVWV*NLKEPA
Trigger: TGCCGGCTCTTTGAGGTTCCAGACCCAAACAAGCCC...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGGGTTTGCAGATTTGCTaGTACGGTGATCTCAATGAT +
Preference number: 4 (lower is better)
Translates to: KEHTECGGKPREGLSGFQGLQIC*YGDLND
Trigger: ATCATTGAGATCACCGTACCAGCAAATCTGCAAACC...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGTATTTGCTCTCTCTaGAGATTAACAAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: EDSATGWQPEAVELAGWRCICSL*RLTKCL
Trigger: CAAGCACTTTGTTAATCTCCAGAGAGAGCAAATACA...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCAGGAAAGATCACTGCACTaGGTGCTGAAGACATTTTTA +
Preference number: 4 (lower is better)
Translates to: EHTECGGKPREGLSGFQQERSLH*VLKTFL
Trigger: TAAAAATGTCTTCAGCACCCAGTGCAGTGATCTTTC...CTGCTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTGGCTGTGGAGGGCCCTaGCACGTAGCGCGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVGCGGP*HVARAH
Trigger: GTGAGCGCGCGCTACGTGCCAGGGCCCTCCACAGCC...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTTCCTGGGGCTCCGGTTaGGCCGTGAGGGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVSWGSG*AVRGRG
Trigger: CCCTCTGCCCCTCACGGCCCAACCGGAGCCCCAGGA...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp ACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGCAGGCTGCGGCAGTTaGGGGCATCGTCGATGGACT +
Preference number: 4 (lower is better)
Translates to: TATLQKEQFCAKRPESFLAGCGS*GHRRWT
Trigger: AGTCCATCGACGATGCCCTCAACTGCCGCAGCCTGC...CAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGACTCTGCCTCTTGAGTaGCCCCCGCTCCGAGCGGTC +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQTLPLE*PPLRAV
Trigger: GACCGCTCGGAGCGGGGGTCACTCAAGAGGCAGAGT...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTAAGCACTCTGCCTCTTaGGTGACCCCCGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: CPLKSLNSLGIQDLILIAKHSAS*VTPAPS
Trigger: GCTCGGAGCGGGGGTCACTCAAGAGGCAGAGTGCTT...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GCTGGAGATCTGGGTCTGGCCAACAGGGCAACTTCTGGACTTTTCAGAAAAAGTCCGCAGAGTCAGGCGTaGGCTTCGCCCTTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: AGDLGLANRATSGLFRKSPQSQA*ASPFLK
Trigger: TTTCAGAAAGGGCGAAGCTCACGCCTGACTCTGCGG...ACTTTTTCTGAAAAGTCCAGAAGTTGCCCTGTTGGCCAGACCCAGATCTCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp GGACGTTATGGTGTTGGGGAGACGAGGATGAGAGCTGGTCACTTTCATGTTGGAAGGGTGGGAGGGATGTaGGGAGGGAAATCGGCAAAA +
Preference number: 4 (lower is better)
Translates to: GRYGVGETRMRAGHFHVGRVGGM*GGKSAK
Trigger: TTTTGCCGATTTCCCTCCTCACATCCCTCCCACCCT...TCCAACATGAAAGTGACCAGCTCTCATCCTCGTCTCCCCAACACCATAACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp TCACAGCTGACGCCAGATGACATGCAGCAGTTTAACGCTTCCAGGTCGGAACAGGTGATCTCAATGATATaGCCGAGGGTGGGAGGGATG +
Preference number: 4 (lower is better)
Translates to: SQLTPDDMQQFNASRSEQVISMI*PRVGGM
Trigger: CATCCCTCCCACCCTCGGTCATATCATTGAGATCAC...CTGTTCCGACCTGGAAGCGTTAAACTGCTGCATGTCATCTGGCGTCAGCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTCTGAGGAAACCTCACTAGCCTaGAGGAACACACTGAGTGCG +
Preference number: 4 (lower is better)
Translates to: GSSTLLGWLTVSRLMVSEETSLA*RNTLSA
Trigger: CGCACTCAGTGTGTTCCTTCAGGCTAGTGAGGTTTC...CTCAGACACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCTTTGATTTCCCCACATaGTCACAACCATGGTTTTAC +
Preference number: 4 (lower is better)
Translates to: LTSLKEHTECGGKPREGLFDFPT*SQPWFY
Trigger: GTAAAACCATGGTTGTGATCATGTGGGGAAATCAAA...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTATGGAGGTCGAGTGCTaGAGCTTGGGCCTCCGCGTG +
Preference number: 4 (lower is better)
Translates to: CPLKSLNSLGIQDLILIAMEVEC*SLGLRV
Trigger: CACGCGGAGGCCCAAGCTGCAGCACTCGACCTCCAT...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTAGGATGGAGGTCGAGTaGTGCAGCTTGGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: CPLKSLNSLGIQDLILIARMEVE*CSLGLR
Trigger: GCGGAGGCCCAAGCTGCAGCACTCGACCTCCATCCT...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGGCCAGTGATTTCACTTaGCTAGAGAAGGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: VQSRCDCTQKGDADASEWASDFT*LEKASS
Trigger: GGAGGACGCCTTCTCTAGGCAAGTGAAATCACTGGC...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGCGCATCCAGGGCCGGTaGCTCCTCAGTGTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQRIQGR*LLSVQA
Trigger: AGCCTGCACACTGAGGAGGCACCGGCCCTGGATGCG...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGCGGTGGTCCATGCCGTaGAGGGCTGTCTGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQRWSMP*RAVWGS
Trigger: CGAACCCCAGACAGCCCTGCACGGCATGGACCACCG...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTGGTACGGTGATCTCAATGGTGAGCAGCGGCAGATaGTCCACCCGCAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: WRLTKCLVCRFAGTVISMVSSGR*STRSRC
Trigger: GCAGCGGCTGCGGGTGGAGCATCTGCCGCTGCTCAC...CATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACGCTGCCCGCCAAGGCTaGGCTCGTAAGCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHAARQG*ARKHSA
Trigger: GGCAGAGTGCTTACGAGCGCAGCCTTGGCGGGCAGC...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTCAGCCGAGCCCGGGATaGAGGGATCCGATCGGCTTT +
Preference number: 4 (lower is better)
Translates to: CPLKSLNSLGIQDLILIAQPSPG*RDPIGF
Trigger: AAAGCCGATCGGATCCCTGCATCCCGGGCTCGGCTG...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGTCCGACTCTATCCTGTaGTTCTCCATCTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: PGRNSLLKIARQSALGSLSDSIL*FSISWT
Trigger: AGTCCAAGAGATGGAGAAGCACAGGATAGAGTCGGA...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCTGGAGATTAACAAAGTaGTTGGTTTGCAGATTTGCT +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATWRLTK*LVCRFA
Trigger: AGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGTCAGCTGTGAACATCTaGTGTCTTTTCAGCTCATTA +
Preference number: 4 (lower is better)
Translates to: KEHTECGGKPREGLSGFQSAVNI*CLFSSL
Trigger: TAATGAGCTGAAAAGACAGCAGATGTTCACAGCTGA...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGTTTTCCAAGAGGAGATaGATGCTGTGTGCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSEFSKRR*MLCAVS
Trigger: CGAGACTGCACACAGCATGCATCTCCTCTTGGAAAA...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GCTGGAGATCTGGGTCTGGCCAACAGGGCAACTTCTGGACTTTTCAGAAAAAGTAGATGGCAACAGAAGTaGCCCGGGTTTGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: AGDLGLANRATSGLFRKSRWQQK*PGFGVR
Trigger: CCGCACACCAAACCCGGGGCACTTCTGTTGCCATCT...ACTTTTTCTGAAAAGTCCAGAAGTTGCCCTGTTGGCCAGACCCAGATCTCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGAAACGCCGTCTGGATaGTGCGGGCCGCATGGCGGG +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTETPSG*CGPHGG
Trigger: CCCGCCATGCGGCCCGCACCATCCAGACGGCGTTTC...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGTTTCTGGGGCTTGTTTaGGTCTGGAACCTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSEFLGLV*VWNLKE
Trigger: CTCTTTGAGGTTCCAGACCCAAACAAGCCCCAGAAA...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGAGGAAGATTTCTCGCTaGTGTAGTCCGAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSERKISR*CSPSFW
Trigger: CCAGAAACTCGGACTACACCAGCGAGAAATCTTCCT...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGCGAGACAGAGTGCTTTaGGGAGCCTGGCTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSERDRVL*GAWLLK
Trigger: TTTTAAAAGCCAGGCTCCCCAAAGCACTCTGTCTCG...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTCTGAGCCTGAAAGCCCCTCCTaGGGTTTTCTGTCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GSSTLLGWLTVSRLMVSEPESPS*GFLSVP
Trigger: AGGAACAGACAGAAAACCCCAGGAGGGGCTTTCAGG...CTCAGACACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGGGCTCAGGCAAGAAGTaGAGGGGAATAAAATTAAAT +
Preference number: 4 (lower is better)
Translates to: KEHTECGGKPREGLSGFQGSGKK*RGIKLN
Trigger: ATTTAATTTTATTCCCCTCCACTTCTTGCCTGAGCC...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGGCGTGCTGGATGTGCTaGGGTGGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQACWMC*GGWWWW
Trigger: CCACCACCACCACCCACCCCAGCACATCCAGCACGC...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCTTCGTTTTCTAGGTTaGGTTTTCATATGCATGTAC +
Preference number: 4 (lower is better)
Translates to: RGERWQQKCPGFGVRLATLRFLG*VFICMY
Trigger: GTACATGCATATGAAAACCCAACCTAGAAAACGAAG...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR CCA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGGGAAACTCATCAGCTaGAGATCTGGGTCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: DACCVQSRCDCTQKGDADGKLIS*RSGSGQ
Trigger: TTGGCCAGACCCAGATCTCCAGCTGATGAGTTTCCC...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGCGTCCTCCAGCTCGGTaGTGGCGTCCGCAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQRPPAR*WRPQSH
Trigger: GTGACTTTGCGGACGCCATCACCGAGCTGGAGGACG...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp ACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGCTCTGCCGGTTGGCTaGGCCATTGATGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: TATLQKEQFCAKRPESFLALPVG*AIDGQV
Trigger: CACTTGGCCATCAATGGCTCAGCCAACCGGCAGAGC...CAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTGGTACGGTGATCTCAATGGGTAGGTCTGCTTGCTaGGCGTCTGCTCCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: WRLTKCLVCRFAGTVISMGRSAC*ASAPAG
Trigger: GCCTGCGGGAGCAGACGCTCAGCAAGCAGACCTACC...CATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTATTGCTAATGTGGACTaGAACGCCTGCCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: WGRQFNTTWLAHRFKADGIANVD*NACLSH
Trigger: GTGTGAAAGGCAGGCGTTTCAGTCCACATTAGCAAT...ACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGAGGATGGAGGTCGAGTaGTGCAGCTTGGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQRMEVE*CSLGLR
Trigger: GCGGAGGCCCAAGCTGCAGCACTCGACCTCCATCCT...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GGATCATGGAGAGTCACAGTTATCGCAGCCATTAAAGTGTCTAAGAATCCGTGTCAGCCGAGCCCGGGATaGAGGGATCCGATCGGCTTT +
Preference number: 4 (lower is better)
Translates to: GSWRVTVIAAIKVSKNPCQPSPG*RDPIGF
Trigger: AAAGCCGATCGGATCCCTGCATCCCGGGCTCGGCTG...ACACGGATTCTTAGACACTTTAATGGCTGCGATAACTGTGACTCTCCATGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp TCACAGCTGACGCCAGATGACATGCAGCAGTTTAACGCTTCCAGGTCGGAACAGGCTGAAATTCCACATTaGTCTCTAGCGATCCCGCAC +
Preference number: 4 (lower is better)
Translates to: SQLTPDDMQQFNASRSEQAEIPH*SLAIPH
Trigger: GTGCGGGATCGCTAGAGAGCAATGTGGAATTTCAGC...CTGTTCCGACCTGGAAGCGTTAAACTGCTGCATGTCATCTGGCGTCAGCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273221.8
ENST00000646269.1
CDS-3UTR GCA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGTGGAGATTAACAAAGTaGTTGGTTTGCAGATTTGCT +
Preference number: 4 (lower is better)
Translates to: KEHTECGGKPREGLSGFQWRLTK*LVCRFA
Trigger: AGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGAATTGCGAGACAGAGTaGTTTGGGGAGCCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: VQSRCDCTQKGDADASEWNCETE*FGEPGF
Trigger: AAAGCCAGGCTCCCCAAAGCACTCTGTCTCGCAATT...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGCACGCCAATACATTTTaGAAACGCACAACACGCAGA +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSEHANTF*KRTTRR
Trigger: TCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTG...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GCACTGACGGCTGCAGTGGCTCGAAAGGCTGAAACTACAAAGTATGGCCCGTGGCACGCCAATACATTTTaGAAACGCACAACACGCAGA +
Preference number: 4 (lower is better)
Translates to: ALTAAVARKAETTKYGPWHANTF*KRTTRR
Trigger: TCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTG...CCACGGGCCATACTTTGTAGTTTCAGCCTTTCGAGCCACTGCAGCCGTCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTTACGCGAGGCCCTGCTaGCCAGCACAGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVYARPC*PAQLQD
Trigger: GTCCTGGAGCTGTGCTGGGCAGCAGGGCCTCGCGTA...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCAATTACGGTGATCACTaGTACCACTCAGAAAACAAA +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSNYGDH*YHSENK
Trigger: TTTGTTTTCTGAGTGGTAGCAGTGATCACCGTAATT...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp ACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGACCAGGGCTCCCAGCTaGGAGCCGTCGTTAGTCACT +
Preference number: 4 (lower is better)
Translates to: TATLQKEQFCAKRPESFLTRAPS*EPSLVT
Trigger: AGTGACTAACGACGGCTCCCAGCTGGGAGCCCTGGT...CAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTTCGTCCAGTTTGCGGTaGTCCATGCCGTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: CPLKSLNSLGIQDLILIASSSLR*SMPCRA
Trigger: AGCCCTGCACGGCATGGACCACCGCAAACTGGACGA...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACAGAGCTGTCGCTGGGTaGCTCGATGGTGAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHRAVAG*LDGEQR
Trigger: CCGCTGCTCACCATCGAGCCACCCAGCGACAGCTCT...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp ACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGAGCACTGGGACATGCTaGGCCGCACGACGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: TATLQKEQFCAKRPESFLSTGTC*AARRLS
Trigger: AGAAAGGCGTCGTGCGGCCCAGCATGTCCCAGTGCT...CAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCAAATCGGCAAAACCCTaGCCAGCCAGCCAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: DVFTVTPIHFANAQHAERKSAKP*PASQPR
Trigger: CCTTGGCTGGCTGGCTGGCCAGGGTTTTGCCGATTT...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGTATTTGCTCTCTCTaGAGATTAACAAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSCICSL*RLTKCL
Trigger: CAAGCACTTTGTTAATCTCCAGAGAGAGCAAATACA...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTCAGCTCACTGGACCATaGGAAGGCAGCGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVQLTGP*EGSGGS
Trigger: GGAGCCCCCGCTGCCTTCCCATGGTCCAGTGAGCTG...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGTCATGCCTGGCTCGGTaGAGGAGCGAGTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQSCLAR*RSEWPR
Trigger: CCTTGGCCACTCGCTCCTCCACCGAGCCAGGCATGA...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR CCA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCATACCCCTTCATGCCTaGCTCGGTGGAGGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: DVFTVTPIHFANAQHAERIPLHA*LGGGAS
Trigger: ACTCGCTCCTCCACCGAGCCAGGCATGAAGGGGTAT...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR TCA 90 bp TGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTGGTACGGTGATCTCAATGGTGAGCGTGAGCGCTTaGTGGCCTCCTCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: WRLTKCLVCRFAGTVISMVSVSA*WPPPQP
Trigger: AGGCTGAGGAGGAGGCCATCAAGCGCTCACGCTCAC...CATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGTGGGTGGCTCGATGGTaGGCAGCGGCAGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTWVARW*AAADAP
Trigger: TGGAGCATCTGCCGCTGCTCACCATCGAGCCACCCA...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GGACGTTATGGTGTTGGGGAGACGAGGATGAGAGCTGGTCACTTTCATGTTGGAGTCATTGTCACCGTCTaGGTAGTCCGACTCAGACTT +
Preference number: 4 (lower is better)
Translates to: GRYGVGETRMRAGHFHVGVIVTV*VVRLRL
Trigger: AAGTCTGAGTCGGACTACTCAGACGGTGACAATGAC...TCCAACATGAAAGTGACCAGCTCTCATCCTCGTCTCCCCAACACCATAACGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACGCGCCTGGAATTTCCTaGGGGCCTCATCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHAPGIS*GPHPAP
Trigger: TGGAGCTGGATGAGGCCCTCAGGAAATTCCAGGCGC...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGCCTCCTCAGCCTGCTTaGGCAGGATGGAGGTCGAGT +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQPPQPA*AGWRSS
Trigger: ACTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGG...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTGGTACGGTGATCTCAATGGGTGCCTCCTCAGTGTaGAGGCTGCGGCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: WRLTKCLVCRFAGTVISMGASSV*RLRQLR
Trigger: CCTCAACTGCCGCAGCCTGCACACTGAGGAGGCACC...CATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCGAGTCCCAGCTGTTaGGGGCCTCCTTGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTASPSC*GPPCGR
Trigger: CCTACCACAAGGAGGCCCGCAACAGCTGGGACTCGC...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTAAGGAACACACTGAGTaGGGCGGGAAACCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: CPLKSLNSLGIQDLILIAKEHTE*GGKPRE
Trigger: TTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGTGCTCAGTGTTGCAATaGTGCCTTGACTATTGTTGT +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSECSVLQ*CLDYCC
Trigger: ACAACAATAGTCAAGGCAGCATTGCAACACTGAGCA...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GCTGGAGATCTGGGTCTGGCCAACAGGGCAACTTCTGGACTTTTCAGAAAAAGTCAGTCTCGATGTGACTaGACACAGAAGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: AGDLGLANRATSGLFRKSQSRCD*TQKGDA
Trigger: TGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTG...ACTTTTTCTGAAAAGTCCAGAAGTTGCCCTGTTGGCCAGACCCAGATCTCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTGGGGCTTCCCTCTCTTaGTCCCGAATAAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: CPLKSLNSLGIQDLILIAGASLS*SRIRSP
Trigger: TGGGCTCCTTATTCGGGAGCAAGAGAGGGAAGCCCC...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTTGTGCGTGCTGGATGTaGTGGGGTGGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVCACWM*WGGWWW
Trigger: CCACCACCACCCACCCCAGCACATCCAGCACGCACA...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp ACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGTGCCCTGTGTGGTGTaGAGGTGTTTCAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: TATLQKEQFCAKRPESFLVPCVV*RCFREP
Trigger: AGGCTCCCTGAAACACCTGCACACCACACAGGGCAC...CAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGTGCCATACCCCTTCATaGCTGGCTCGGTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQCHTPS*LARWRS
Trigger: GCTCCTCCACCGAGCCAGGCATGAAGGGGTATGGCA...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR CCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACCCTGCTTGCGCAGGATaGAGGTCGAGTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHPACAG*RSSAAA
Trigger: AGCTGCAGCACTCGACCTCCATCCTGCGCAAGCAGG...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTAGAGCTGTCGCTGGGTaGCTCGATGGTGAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVRAVAG*LDGEQR
Trigger: CCGCTGCTCACCATCGAGCCACCCAGCGACAGCTCT...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCACACATGGTCCTCATTaGTCTTTAGCTCTCGCTTAC +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFTHGPH*SLALAY
Trigger: GTAAGCGAGAGCTAAAGACCAATGAGGACCATGTGT...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCGGGCTTGTTTGGGTCTaGAACCTCAAAGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: DVFTVTPIHFANAQHAERGLVWV*NLKEPA
Trigger: TGCCGGCTCTTTGAGGTTCCAGACCCAAACAAGCCC...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGTTGAGGCTAGAGCACTaGGACATGCTGGGCCGCACG +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQLRLEH*DMLGRT
Trigger: CGTGCGGCCCAGCATGTCCCAGTGCTCTAGCCTCAA...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGGGTTTGCAGATTTGCTaGTACGGTGATCTCAATGAT +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSEGLQIC*YGDLND
Trigger: ATCATTGAGATCACCGTACCAGCAAATCTGCAAACC...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGCGAGACAGAGTGCTTTaGGGAGCCTGGCTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: VQSRCDCTQKGDADASEWRDRVL*GAWLLK
Trigger: TTTTAAAAGCCAGGCTCCCCAAAGCACTCTGTCTCG...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGGCAGCCCGAGGCTGTaGAGCTTGCAGGATGGCGAT +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTGSPRL*SLQDGD
Trigger: ATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCC...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGGCCGTCGTTAGTCACTaGGACCTGCTTCCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQAVVSH*DLLPLE
Trigger: TTCGAGGGGAAGCAGGTCTCAGTGACTAACGACGGC...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTCATCGATGTACAGGGTaGCATCACTGTACGAGGCCG +
Preference number: 4 (lower is better)
Translates to: CPLKSLNSLGIQDLILIAHRCTG*HHCTRP
Trigger: CGGCCTCGTACAGTGATGTCACCCTGTACATCGATG...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACGGTTGGCTGAGCCATTaGTGGCCAAGTGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHGWLSH*WPSGCP
Trigger: TGGACAGCCACTTGGCCATCAATGGCTCAGCCAACC...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCCCACCAGGAGGTCGTTaGACAGGAAGATTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: DVFTVTPIHFANAQHAERPPGGR*TGRFLA
Trigger: AGCGAGAAATCTTCCTGTTCAACGACCTCCTGGTGG...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCAATTTCTTCCGGTCTTaGGGGTTGGGGGCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: DVFTVTPIHFANAQHAERNFFRS*GLGALK
Trigger: CTTCAACGCCCCCAACCCTCAAGACCGGAAGAAATT...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTGGGTCCTCTCCGAGTTaGAGTGCAGGCACCACATGG +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVGSSPS*SAGTTW
Trigger: CCATGTGGTGCCTGCACTGCAACTCGGAGAGGACCC...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273221.8
CDS-3UTR GCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTCAATCCGGCGTGACATaGGGTTCTCTGACATGGAGC +
Preference number: 4 (lower is better)
Translates to: CPLKSLNSLGIQDLILIAQSGVT*GSLTWS
Trigger: GCTCCATGTCAGAGAACCGCATGTCACGCCGGATTG...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACCGCACGACGCCTTTCTaGTTCTCGAGCTCCGACTCT +
Preference number: 4 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHRTTPF*FSSSDS
Trigger: AGAGTCGGAGCTCGAGAAGCAGAAAGGCGTCGTGCG...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGTCAGCTGTGAACATCTaGTGTCTTTTCAGCTCATTA +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSESAVNI*CLFSSL
Trigger: TAATGAGCTGAAAAGACAGCAGATGTTCACAGCTGA...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCCAGTCTCGATGTGACTaGACACAGAAGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: DVFTVTPIHFANAQHAERQSRCD*TQKGDA
Trigger: TGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTG...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCGGACCTGATTCTAATTaGTTAAAACAACTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFGPDSN*LKQLGG
Trigger: GCCTCCGAGTTGTTTTAAGCAATTAGAATCAGGTCC...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGTGCGGTTCTCTGACATaGAGCTGCGCAAGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQCGSLT*SCASAR
Trigger: TCGAGCGCTTGCGCAGCTCCATGTCAGAGAACCGCA...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCAAAGAAATGCCACGCCAATGGGAGGACACAGGTGGGCGGGTTAAAGTCACATACACATGGTCCTCATTaGTCTTTAGCTCTCGCTTAC +
Preference number: 4 (lower is better)
Translates to: PKKCHANGRTQVGGLKSHTHGPH*SLALAY
Trigger: GTAAGCGAGAGCTAAAGACCAATGAGGACCATGTGT...ATGTGACTTTAACCCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGAGTCCTCGGGTCCCATaGCTTAGGAGCACAGCACTG +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQSPRVP*LRSTAL
Trigger: CAGTGCTGTGCTCCTAAGCCATGGGACCCGAGGACT...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGGAAAGATCACTGCACTaGGTGCTGAAGACATTTTTA +
Preference number: 4 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSEERSLH*VLKTFL
Trigger: TAAAAATGTCTTCAGCACCCAGTGCAGTGATCTTTC...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCCTCAAAGGTACACAGTaGGGGTGCCAGGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: DVFTVTPIHFANAQHAERLKGTQ*GCQASC
Trigger: ACAAGAAGCCTGGCACCCCCACTGTGTACCTTTGAG...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGGAGCTCCTTGTAAGGTaGGTATTGCTAATGTGGACT +
Preference number: 4 (lower is better)
Translates to: VQSRCDCTQKGDADASEWELLVR*VLLMWT
Trigger: AGTCCACATTAGCAATACCCACCTTACAAGGAGCTC...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGCATCGATGTACAGGGTaGCATCACTGTACGAGGCCG +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQHRCTG*HHCTRP
Trigger: CGGCCTCGTACAGTGATGTCACCCTGTACATCGATG...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp ACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGTCTCAGGCTTCTTGTTaGAGAGGTTCAGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: TATLQKEQFCAKRPESFLSQASC*RGSGRC
Trigger: GCATCGGCCTGAACCTCTTCAACAAGAAGCCTGAGA...CAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACCAAAGCCACGCTCGATaGGGTACTGGACTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHQSHAR*GTGLPS
Trigger: AGAAGGGAGTCCAGTACCTCATCGAGCGTGGCTTTG...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGCCCGCAGGTCATCGGTaGATTTCTTCCGGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQPAGHR*ISSGLE
Trigger: CTCAAGACCGGAAGAAATTCACCGATGACCTGCGGG...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGTTAGGAGCACAGCACTaGCGGCTGCAGTGGCTCGAA +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTLGAQH*RLQWLE
Trigger: TTCGAGCCACTGCAGCCGTCAGTGCTGTGCTCCTAA...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTGGTACGGTGATCTCAATGCCGCAGAGTCAGGCGTaGGCTTCGCCCTTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: WRLTKCLVCRFAGTVISMPQSQA*ASPFLK
Trigger: TTTCAGAAAGGGCGAAGCTCACGCCTGACTCTGCGG...CATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACCCGAAGCTGTGGCTCTaGCAGGTGGGATCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHPKLWL*QVGSLK
Trigger: CTTTAGAGATCCCACCTGTCAGAGCCACAGCTTCGG...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGTGCCAGGCTTCTTGTaGGGGAGGTGTCCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTVPGFL*GRCPLK
Trigger: CTTCAAGGGACACCTCCCTCACAAGAAGCCTGGCAC...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGAGTCCGACTCAGACTTaGTCTGCCGGTTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTSPTQT*SAGWLS
Trigger: GCTCAGCCAACCGGCAGAGCAAGTCTGAGTCGGACT...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGAGCTTCTCCACCTTCTaGACCTGGGACACATGGTCC +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQSFSTF*TWDTWS
Trigger: GGACCATGTGTCCCAGGTGCAGAAGGTGGAGAAGCT...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATCTTGGTTTGCAGATTTaGTGGTACGGTGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: DACCVQSRCDCTQKGDADLGLQI*WYGDLN
Trigger: ATTGAGATCACCGTACCAGCAAATCTGCAAACCAAG...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCAATTGCGAGACAGAGTaGTTTGGGGAGCCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: DVFTVTPIHFANAQHAERNCETE*FGEPGF
Trigger: AAAGCCAGGCTCCCCAAAGCACTCTGTCTCGCAATT...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TCACAGCTGACGCCAGATGACATGCAGCAGTTTAACGCTTCCAGGTCGGAACAGTGCTCAGTGTTGCAATaGTGCCTTGACTATTGTTGT +
Preference number: 4 (lower is better)
Translates to: SQLTPDDMQQFNASRSEQCSVLQ*CLDYCC
Trigger: ACAACAATAGTCAAGGCAGCATTGCAACACTGAGCA...CTGTTCCGACCTGGAAGCGTTAAACTGCTGCATGTCATCTGGCGTCAGCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTAGTCCTCGGGTCCCATaGCTTAGGAGCACAGCACTG +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVSPRVP*LRSTAL
Trigger: CAGTGCTGTGCTCCTAAGCCATGGGACCCGAGGACT...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTCCGGGAAGGGCTCAGTaGGTTCCAGCAGTTCCTTAC +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVPGRAQ*VPAVPY
Trigger: GTAAGGAACTGCTGGAACCCACTGAGCCCTTCCCGG...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
3UTR CAA 72 bp ACTTCAACGATGTGTTTACAGTCACGCCAATACATTTaGCAAACGCACAACACGCAGAGCGCAGCCTCACAG +
Preference number: 4 (lower is better)
Translates to: TSTMCLQSRQYI*QTHNTQSAASQ
Trigger: CTGTGAGGCTGCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATCGTTGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp ACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGATGGACTCGGCCAGTaGTTTCACTTGCCTAGAGAA +
Preference number: 4 (lower is better)
Translates to: TATLQKEQFCAKRPESFLDGLGQ*FHLPRE
Trigger: TTCTCTAGGCAAGTGAAATCACTGGCCGAGTCCATC...CAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGAATTTCTTCCGGTCTTaGGGGTTGGGGGCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQNFFRS*GLGALK
Trigger: CTTCAACGCCCCCAACCCTCAAGACCGGAAGAAATT...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTGGTACGGTGATCTCAATGAGGGTGGGAGGGATGTaGGGAGGGAAATCGGCAAAA +
Preference number: 4 (lower is better)
Translates to: WRLTKCLVCRFAGTVISMRVGGM*GGKSAK
Trigger: TTTTGCCGATTTCCCTCCTCACATCCCTCCCACCCT...CATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTGGTACGGTGATCTCAATGTGTGCAGTCTCGATGTaGCTGCACACAGAAGGGCGA +
Preference number: 4 (lower is better)
Translates to: WRLTKCLVCRFAGTVISMCAVSM*LHTEGR
Trigger: TCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACA...CATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTTGGACACTCTCGTGTTaGTGTAGCTCTCCGGCGCAT +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVWTLSC*CSSPAH
Trigger: ATGCGCCGGAGAGCTACATCAACACGAGAGTGTCCA...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACTCTACACAATTGTGCTaGTGCCGCTGGGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHSTQLC*CRWVWP
Trigger: AGGCCAAACCCAGCGGCATCAGCACAATTGTGTAGA...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGCCTCTCGGAGGACTCTaGATGAGTGTGCGTCAAATC +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQPLGGL*MSVRQI
Trigger: GATTTGACGCACACTCATTCAGAGTCCTCCGAGAGG...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGAGAGCAGGACCTGCATaGCGTACAAGGAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQRAGPA*RTRRRT
Trigger: AGTCCTTCTCCTTGTACGGCATGCAGGTCCTGCTCT...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGTCGAAGAGCAGGACCTaGATGCCGTACAAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQSKSRT*MPYKEK
Trigger: CTTCTCCTTGTACGGCATGCAGGTCCTGCTCTTCGA...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCTGGAGATTAACAAAGTaGTTGGTTTGCAGATTTGCT +
Preference number: 4 (lower is better)
Translates to: PVALSQHPASAVNICCLFWRLTK*LVCRFA
Trigger: AGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGCAGTCTCGATGTGACTaGACACAGAAGGGCGATGCA +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQQSRCD*TQKGDA
Trigger: TGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTG...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGTCCACCTTCTGCACCTaGGACACATGGTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQSTFCT*DTWSSL
Trigger: CAATGAGGACCATGTGTCCCAGGTGCAGAAGGTGGA...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTGTGGAGCTTGCAGGATaGCGATGGAGAGGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVVELAG*RWRGRV
Trigger: AACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCAC...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGCCACCAGGAGGTCGTTaGACAGGAAGATTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTPPGGR*TGRFLA
Trigger: AGCGAGAAATCTTCCTGTTCAACGACCTCCTGGTGG...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTGAAACCTCACTAGCCTaGAGGAACACACTGAGTGCG +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVETSLA*RNTLSA
Trigger: CGCACTCAGTGTGTTCCTTCAGGCTAGTGAGGTTTC...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGGTTGCAATGCTGCCTTaGCTATTGTTGTTACATAAA +
Preference number: 4 (lower is better)
Translates to: VQSRCDCTQKGDADASEWVAMLP*LLLLHK
Trigger: TTTATGTAACAACAATAGTCAAGGCAGCATTGCAAC...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCTCGGAGGACTCTGAATaGGTGTGCGTCAAATCATAT +
Preference number: 4 (lower is better)
Translates to: DVFTVTPIHFANAQHAERSEDSE*VCVKSY
Trigger: ATATGATTTGACGCACACTCATTCAGAGTCCTCCGA...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACAGTGGCTCGAAAGGCTaGAACTACAAAGTATGGCCC +
Preference number: 4 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHSGSKG*NYKVWP
Trigger: GGGCCATACTTTGTAGTTTCAGCCTTTCGAGCCACT...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGTCTCTGACATGGAGCTaGGCAAGCGCTCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTSLTWS*ASARSS
Trigger: AGAACTTCGAGCGCTTGCGCAGCTCCATGTCAGAGA...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTGGTACGGTGATCTCAATGAGAGCAGGACCTGCATaGCGTACAAGGAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: WRLTKCLVCRFAGTVISMRAGPA*RTRRRT
Trigger: AGTCCTTCTCCTTGTACGGCATGCAGGTCCTGCTCT...CATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGCTAGATTGCTGTATTTaGTCTCTCTGGAGATTAACA +
Preference number: 4 (lower is better)
Translates to: VQSRCDCTQKGDADASEWLDCCI*SLWRLT
Trigger: TGTTAATCTCCAGAGAGAGCAAATACAGCAATCTAG...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACTTGTTCATCTGGTACTaGCGAAACGCCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHLFIWY*RNAVWM
Trigger: CATCCAGACGGCGTTTCGCCAGTACCAGATGAACAA...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCACACATGGTCCTCATTaGTCTTTAGCTCTCGCTTAC +
Preference number: 4 (lower is better)
Translates to: DVFTVTPIHFANAQHAERTHGPH*SLALAY
Trigger: GTAAGCGAGAGCTAAAGACCAATGAGGACCATGTGT...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGCCTGAAAGCCCCTCCTaGGGTTTTCTGTCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTPESPS*GFLSVP
Trigger: AGGAACAGACAGAAAACCCCAGGAGGGGCTTTCAGG...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTCCTGAAAGCCCCTCCTaGGGTTTTCTGTCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVPESPS*GFLSVP
Trigger: AGGAACAGACAGAAAACCCCAGGAGGGGCTTTCAGG...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTCTCAAAGGTACACAGTaGGGGTGCCAGGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVLKGTQ*GCQASC
Trigger: ACAAGAAGCCTGGCACCCCCACTGTGTACCTTTGAG...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTGATGGACTCGGCCAGTaGTTTCACTTGCCTAGAGAA +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVDGLGQ*FHLPRE
Trigger: TTCTCTAGGCAAGTGAAATCACTGGCCGAGTCCATC...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGTCATTGTCACCGTCTaGGTAGTCCGACTCAGACTT +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTVIVTV*VVRLRL
Trigger: AAGTCTGAGTCGGACTACTCAGACGGTGACAATGAC...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCTTTTTCCCCACAATaGGCTTCTCCACCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTAFSPQ*ASPPSA
Trigger: TGCAGAAGGTGGAGAAGCTCATTGTGGGGAAAAAGC...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GGACGTTATGGTGTTGGGGAGACGAGGATGAGAGCTGGTCACTTTCATGTTGGAGTTGCAATGCTGCCTTaGCTATTGTTGTTACATAAA +
Preference number: 4 (lower is better)
Translates to: GRYGVGETRMRAGHFHVGVAMLP*LLLLHK
Trigger: TTTATGTAACAACAATAGTCAAGGCAGCATTGCAAC...TCCAACATGAAAGTGACCAGCTCTCATCCTCGTCTCCCCAACACCATAACGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCCTTGGTTTGCAGATTTaGTGGTACGGTGATCTCAAT +
Preference number: 4 (lower is better)
Translates to: DVFTVTPIHFANAQHAERLGLQI*WYGDLN
Trigger: ATTGAGATCACCGTACCAGCAAATCTGCAAACCAAG...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp GCTGGAGATCTGGGTCTGGCCAACAGGGCAACTTCTGGACTTTTCAGAAAAAGTTCAGCTGTGAACATCTaGTGTCTTTTCAGCTCATTA +
Preference number: 4 (lower is better)
Translates to: AGDLGLANRATSGLFRKSSAVNI*CLFSSL
Trigger: TAATGAGCTGAAAAGACAGCAGATGTTCACAGCTGA...ACTTTTTCTGAAAAGTCCAGAAGTTGCCCTGTTGGCCAGACCCAGATCTCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTGAGATGCATGCTGTGTaGAGTCTCGATGTGACTGCA +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVEMHAV*SLDVTA
Trigger: TGCAGTCACATCGAGACTGCACACAGCATGCATCTC...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTGGTACGGTGATCTCAATGGAGATGCATGCTGTGTaGAGTCTCGATGTGACTGCA +
Preference number: 4 (lower is better)
Translates to: WRLTKCLVCRFAGTVISMEMHAV*SLDVTA
Trigger: TGCAGTCACATCGAGACTGCACACAGCATGCATCTC...CATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACTTTCTGGGGCTTGTTTaGGTCTGGAACCTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHFLGLV*VWNLKE
Trigger: CTCTTTGAGGTTCCAGACCCAAACAAGCCCCAGAAA...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGTGTAGTCCGAGTTTCTaGGGCTTGTTTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTCSPSF*GLFGSG
Trigger: TCCAGACCCAAACAAGCCCCAGAAACTCGGACTACA...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTTCAACACTACTTGGCTaGCTCACCGTTTCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVSTLLG*LTVSRL
Trigger: CAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGA...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTCATGCTGTTTCTTTCTaGGCAGACACCAAAGAAATG +
Preference number: 4 (lower is better)
Translates to: CPLKSLNSLGIQDLILIAHAVSF*ADTKEM
Trigger: CATTTCTTTGGTGTCTGCTCAGAAAGAAACAGCATG...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCCAAACAGAATGCAGATaGAAACAAACGCACTCCTTT +
Preference number: 4 (lower is better)
Translates to: DVFTVTPIHFANAQHAERQTECR*KQTHSF
Trigger: AAAGGAGTGCGTTTGTTTTCATCTGCATTCTGTTTG...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGTACATGGAATTACGGTaGTCACTGCTACCACTCAGA +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQYMELR*SLLPLR
Trigger: TCTGAGTGGTAGCAGTGATCACCGTAATTCCATGTA...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR GCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACACAAAGTGCTTGGTTTaGAGATTTGCTGGTACGGTG +
Preference number: 4 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHTKCLV*RFAGTV
Trigger: CACCGTACCAGCAAATCTGCAAACCAAGCACTTTGT...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTGGTACGGTGATCTCAATGCAGTTCAACACTACTTaGCTGGCTCACCGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: WRLTKCLVCRFAGTVISMQFNTT*LAHRFK
Trigger: CTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTG...CATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACCTTCAGGTTCGAGAGTaGTTCCTGATGAAAACACTC +
Preference number: 4 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHLQVRE*FLMKTL
Trigger: GAGTGTTTTCATCAGGAACCACTCTCGAACCTGAAG...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGAGTTTATTAACACTTTaGTATCTGCTCCGGGGACAG +
Preference number: 4 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQSLLTL*YLLRGQ
Trigger: CTGTCCCCGGAGCAGATATCAAAGTGTTAATAAACT...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTTGGGTATTGCTAATGTaGACTGAAACGCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVWVLLM*TETPAF
Trigger: AAAGGCAGGCGTTTCAGTCCACATTAGCAATACCCA...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGCATGCTGTTTCTTTCTaGGCAGACACCAAAGAAATG +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTHAVSF*ADTKEM
Trigger: CATTTCTTTGGTGTCTGCTCAGAAAGAAACAGCATG...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR TCA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACCAAACAGAATGCAGATaGAAACAAACGCACTCCTTT +
Preference number: 4 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHQTECR*KQTHSF
Trigger: AAAGGAGTGCGTTTGTTTTCATCTGCATTCTGTTTG...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp ACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGCTAGATTGCTGTATTTaGTCTCTCTGGAGATTAACA +
Preference number: 4 (lower is better)
Translates to: TATLQKEQFCAKRPESFLLDCCI*SLWRLT
Trigger: TGTTAATCTCCAGAGAGAGCAAATACAGCAATCTAG...CAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTCTTCGTTTTCTAGGTTaGGTTTTCATATGCATGTAC +
Preference number: 4 (lower is better)
Translates to: CPLKSLNSLGIQDLILIALRFLG*VFICMY
Trigger: GTACATGCATATGAAAACCCAACCTAGAAAACGAAG...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGTTTGATTTCCCCACATaGTCACAACCATGGTTTTAC +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTFDFPT*SQPWFY
Trigger: GTAAAACCATGGTTGTGATCATGTGGGGAAATCAAA...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTGGTACGGTGATCTCAATGGTTCCTATTCATTACTaGTACCCTTCAGAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: WRLTKCLVCRFAGTVISMVPIHY*YPSERA
Trigger: TGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAAC...CATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTTCAGTGTTGCAATGCTaGCTTGACTATTGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVSVLQC*LDYCCY
Trigger: GTAACAACAATAGTCAAGGCAGCATTGCAACACTGA...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTTGCAGTTTAGCTATTTaGTTACCTGAAATAACAGCA +
Preference number: 4 (lower is better)
Translates to: CPLKSLNSLGIQDLILIACSLAI*LPEITA
Trigger: TGCTGTTATTTCAGGTAAGCAAATAGCTAAACTGCA...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CCA 90 bp GGATCATGGAGAGTCACAGTTATCGCAGCCATTAAAGTGTCTAAGAATCCGTGTTGTATTTGCTCTCTCTaGAGATTAACAAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GSWRVTVIAAIKVSKNPCCICSL*RLTKCL
Trigger: CAAGCACTTTGTTAATCTCCAGAGAGAGCAAATACA...ACACGGATTCTTAGACACTTTAATGGCTGCGATAACTGTGACTCTCCATGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR TCA 90 bp TGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTGGTACGGTGATCTCAATGGTTGCAATGCTGCCTTaGCTATTGTTGTTACATAAA +
Preference number: 4 (lower is better)
Translates to: WRLTKCLVCRFAGTVISMVAMLP*LLLLHK
Trigger: TTTATGTAACAACAATAGTCAAGGCAGCATTGCAAC...CATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGCTAGATTGCTGTATTTaGTCTCTCTGGAGATTAACA +
Preference number: 4 (lower is better)
Translates to: SVPIHYCYPSERAILCQTLDCCI*SLWRLT
Trigger: TGTTAATCTCCAGAGAGAGCAAATACAGCAATCTAG...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR GCA 90 bp TGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTGGTACGGTGATCTCAATGTACTGTAGAGTGTACTaGAGTTTAGCTATTTGCTTA +
Preference number: 4 (lower is better)
Translates to: WRLTKCLVCRFAGTVISMYCRVY*SLAICL
Trigger: TAAGCAAATAGCTAAACTGCAGTACACTCTACAGTA...CATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CAA 90 bp CTGTGTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCAGAAGTGCCCCGGGTTaGGTGTGCGGCTGGCGACCC +
Preference number: 5 (lower is better)
Translates to: LCAPRGPRAAAGGRGHGPRSAPG*VCGWRP
Trigger: GGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCT...GGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR CAA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCCCGCGTGCGCTGCTGTaGCCCCGGCGGCCCCGAGTA +
Preference number: 5 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAAPRALL*PRRPRV
Trigger: TACTCGGGGCCGCCGGGGCAACAGCAGCGCACGCGG...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCCTGAGGGCGCTGCGCTaGAGGCCCTCACCGCTGGCA +
Preference number: 5 (lower is better)
Translates to: APGLVCGWRPPGVPCVVCLRALR*RPSPLA
Trigger: TGCCAGCGGTGAGGGCCTCAAGCGCAGCGCCCTCAG...GCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS CCA 90 bp CGCAACTCAGGCTCCTCCCGGGGGAGGCTCTTGGGGGCGCCGCTGTaGGGACCATGCTTGGGACTGCCCTGCTGCCCGCCAAGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: RNSGSSRGRLLGAPL*GPCLGLPCCPPRLR
Trigger: GCGCAGCCTTGGCGGGCAGCAGGGCAGTCCCAAGCATGGTCCCCACAGCGGCGCCCCCAAGAGCCTCCCCCGGGAGGAGCCTGAGTTGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS-3UTR CAA 90 bp ATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCGCGTGCGCTGCTGTaGCCCCGGCGGCCCCGAGTA +
Preference number: 5 (lower is better)
Translates to: MATEVPRVWCAAGDPRACPRALL*PRRPRV
Trigger: TACTCGGGGCCGCCGGGGCAACAGCAGCGCACGCGG...GCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCAT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGGTCGAGTGCTGCAGCTaGGGCCTCCGCGTGCGCTGC +
Preference number: 5 (lower is better)
Translates to: CPGFGVRLATPGRALCGVVECCS*GLRVRC
Trigger: GCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGAC...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGAGGGGGCCGGAGACTaGAGGGTGGTGGGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: PGFGVRLATPGRALCGVQEGAGD*RVVGSL
Trigger: CAGCGAGCCCACCACCCTCAAGTCTCCGGCCCCCTC...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCTGAGGGCGCTGCGCTaGAGGCCCTCACCGCTGGCA +
Preference number: 5 (lower is better)
Translates to: CPGFGVRLATPGRALCGVLRALR*RPSPLA
Trigger: TGCCAGCGGTGAGGGCCTCAAGCGCAGCGCCCTCAG...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTCTCCTGGGGCTCCGGTaGGGCCGTGAGGGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: ATEVPRVWCAAGDPRACPLLGLR*GREGQR
Trigger: CCTCTGCCCCTCACGGCCCAACCGGAGCCCCAGGAG...AGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCCCTCGCCCTCGACGCTaGGTCCAGTGCTGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: APGLVCGWRPPGVPCVVCPRPRR*VQCCGW
Trigger: CCACCCACAGCACTGGACCAAGCGTCGAGGGCGAGG...GCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS GCA 90 bp GGTGGCTCGATGGTGAGCAGCGGCAGATGCTCCACCCGCAGCCGCTaGTCCTGCCGCTCCAGCGACGGCGTGCTCCGGCAGCTCGTGTCC +
Preference number: 5 (lower is better)
Translates to: GGSMVSSGRCSTRSR*SCRSSDGVLRQLVS
Trigger: GGACACGAGCTGCCGGAGCACGCCGTCGCTGGAGCGGCAGGAGCAGCGGCTGCGGGTGGAGCATCTGCCGCTGCTCACCATCGAGCCACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS-3UTR CAA 90 bp GCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGAGGGGGCCGGAGACTaGAGGGTGGTGGGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: ATEVPRVWCAAGDPRACPEGAGD*RVVGSL
Trigger: CAGCGAGCCCACCACCCTCAAGTCTCCGGCCCCCTC...AGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CTGTGTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCGACTTGCTCTGCCGGTaGGCTGAGCCATTGATGGCC +
Preference number: 5 (lower is better)
Translates to: LCAPRGPRAAAGGRGHGPDLLCR*AEPLMA
Trigger: GGCCATCAATGGCTCAGCCAACCGGCAGAGCAAGTC...GGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR CAA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTAGAAGTGCCCCGGGTTaGGTGTGCGGCTGGCGACCC +
Preference number: 5 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCRSAPG*VCGWRP
Trigger: GGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCT...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGGGCAGGCGAGGAGTTTaGCAAAGTGCCGGCCGCGGC +
Preference number: 5 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWGRRGV*QSAGRG
Trigger: GCCGCGGCCGGCACTTTGCAAAACTCCTCGCCTGCC...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648114.1
CDS GCA 90 bp ATGGCCTCCTCCTCAGCCTGCTTGCGCAGGATGGAGGTCGAGTGCTaGAGCTTGGGCCTCCGCGTGCGCTGCTGTTGCCCCGGCGGCCCC +
Preference number: 5 (lower is better)
Translates to: MASSSACLRRMEVEC*SLGLRVRCCCPGGP
Trigger: GGGGCCGCCGGGGCAACAGCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGGAGGCCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CCA 90 bp GTCATCTCGTCCAGTTTGCGGTGGTCCATGCCGTGCAGGGCTGTCTaGGGTTCGGTGTCCCGGGCCCGCGCCGCATCCAGGGCCGGTGCC +
Preference number: 5 (lower is better)
Translates to: VISSSLRWSMPCRAV*GSVSRARAASRAGA
Trigger: GGCACCGGCCCTGGATGCGGCGCGGGCCCGGGACACCGAACCCCAGACAGCCCTGCACGGCATGGACCACCGCAAACTGGACGAGATGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS-3UTR CAA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCGTCGAGTGCTGCAGCTaGGGCCTCCGCGTGCGCTGC +
Preference number: 5 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPVECCS*GLRVRC
Trigger: GCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGAC...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGAGGGGGCCGGAGACTaGAGGGTGGTGGGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCEGAGD*RVVGSL
Trigger: CAGCGAGCCCACCACCCTCAAGTCTCCGGCCCCCTC...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTCTGATGCCGCTGGGTTaGGCCTTGCTGCTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCLMPLG*ALLLVG
Trigger: CCCCACCAGCAGCAAGGCCAAACCCAGCGGCATCAG...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCTTTCTCCTTCAGACTaGTCGCGGCGGCCGCCGAGC +
Preference number: 5 (lower is better)
Translates to: CPGFGVRLATPGRALCGVLSPSD*SRRPPS
Trigger: GCTCGGCGGCCGCCGCGACAAGTCTGAAGGAGAAAG...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648114.1
CDS GCA 90 bp GCTTGCGCAGGATGGAGGTCGAGTGCTGCAGCTTGGGCCTCCGCGTaGGCTGCTGTTGCCCCGGCGGCCCCGAGTACAGCCCATAGGCTC +
Preference number: 5 (lower is better)
Translates to: ACAGWRSSAAAWASA*AAVAPAAPSTAHRL
Trigger: GAGCCTATGGGCTGTACTCGGGGCCGCCGGGGCAACAGCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGACCTCCATCCTGCGCAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS GCA 90 bp TGTCTGGGGTTCGGTGTCCCGGGCCCGCGCCGCATCCAGGGCCGGTaGCTCCTCAGTGTGCAGGCTGCGGCAGTTGAGGGCATCGTCGAT +
Preference number: 5 (lower is better)
Translates to: CLGFGVPGPRRIQGR*LLSVQAAAVEGIVD
Trigger: ATCGACGATGCCCTCAACTGCCGCAGCCTGCACACTGAGGAGGCACCGGCCCTGGATGCGGCGCGGGCCCGGGACACCGAACCCCAGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CCA 90 bp CCTCCTCAGCCTGCTTGCGCAGGATGGAGGTCGAGTGCTGCAGCTTaGGCCTCCGCGTGCGCTGCTGTTGCCCCGGCGGCCCCGAGTACA +
Preference number: 5 (lower is better)
Translates to: PPQPACAGWRSSAAA*ASACAAVAPAAPST
Trigger: TGTACTCGGGGCCGCCGGGGCAACAGCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS-3UTR CAA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTCCGCGTGCGCTGCTGTaGCCCCGGCGGCCCCGAGTA +
Preference number: 5 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGPRALL*PRRPRV
Trigger: TACTCGGGGCCGCCGGGGCAACAGCAGCGCACGCGG...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTCCTCCTCAGCCTGCTaGCGCAGGATGGAGGTCGAG +
Preference number: 5 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWSSSAC*RRMEVE
Trigger: CTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGGA...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAAGTGAGCGTGAGCGCTaGATGGCCTCCTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PRVWCAAGDPRACPVWCASERER*MASSSA
Trigger: GGCTGAGGAGGAGGCCATCAAGCGCTCACGCTCACT...TGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGCAGGCTGCGGCAGTaGAGGGCATCGTCGATGGAC +
Preference number: 5 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWCRLRQ*RASSMD
Trigger: GTCCATCGACGATGCCCTCAACTGCCGCAGCCTGCA...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CTGTGTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCTTGCCCGACTCCTTTTaGAGGCTAGAGCACTGGGAC +
Preference number: 5 (lower is better)
Translates to: LCAPRGPRAAAGGRGHGPLPDSF*RLEHWD
Trigger: GTCCCAGTGCTCTAGCCTCAAAAAGGAGTCGGGCAA...GGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR CAA 90 bp CGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCGCTCAGCCGCGCCACTaGGCGCTCCAGCTCCTCGAT +
Preference number: 5 (lower is better)
Translates to: RPPGVPCVVCRCFREPGTAQPRH*ALQLLD
Trigger: ATCGAGGAGCTGGAGCGCCAAGTGGCGCGGCTGAGC...GGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648114.1
CDS GCA 90 bp TCAAGCTCTAGCTCCAGAAGGGACTGGGTCCTCTCCGAGTTGCAGTaGAGGCACCACATGGCGGCCGCAGTGGGAGCGGGCCGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: SSSSSRRDWVLSELQ*RHHMAAAVGAGRAG
Trigger: CCCGGCCCGGCCCGCTCCCACTGCGGCCGCCATGTGGTGCCTGCACTGCAACTCGGAGAGGACCCAGTCCCTTCTGGAGCTAGAGCTTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273221.8
CDS GCA 90 bp TTGATGGCCTCCTCCTCAGCCTGCTTGCGCAGGATGGAGGTCGAGTaGTGCAGCTTGGGCCTCCGCGTGCGCTGCTGTTGCCCCGGCGGC +
Preference number: 5 (lower is better)
Translates to: LMASSSACLRRMEVE*CSLGLRVRCCCPGG
Trigger: GCCGCCGGGGCAACAGCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGGAGGCCATCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS GCA 90 bp CTGTACGAGGCCGTCATCTCGTCCAGTTTGCGGTGGTCCATGCCGTaGAGGGCTGTCTGGGGTTCGGTGTCCCGGGCCCGCGCCGCATCC +
Preference number: 5 (lower is better)
Translates to: LYEAVISSSLRWSMP*RAVWGSVSRARAAS
Trigger: GGATGCGGCGCGGGCCCGGGACACCGAACCCCAGACAGCCCTGCACGGCATGGACCACCGCAAACTGGACGAGATGACGGCCTCGTACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS GCA 90 bp GATGCTCCACCCGCAGCCGCTGCTCCTGCCGCTCCAGCGACGGCGTaGTCCGGCAGCTCGTGTCCGTGTCAGCCTTGTCCTCTTTGTGGG +
Preference number: 5 (lower is better)
Translates to: DAPPAAAAPAAPATA*SGSSCPCQPCPLCG
Trigger: CCCACAAAGAGGACAAGGCTGACACGGACACGAGCTGCCGGAGCACGCCGTCGCTGGAGCGGCAGGAGCAGCGGCTGCGGGTGGAGCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS-3UTR CAA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGAGTCGAGTGCTGCAGCTaGGGCCTCCGCGTGCGCTGC +
Preference number: 5 (lower is better)
Translates to: EDSATGWQPEAVELAGWRVECCS*GLRVRC
Trigger: GCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGAC...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGAGCATCTCCACCTGCTaGTCCTGCAGGTCCGAGGAG +
Preference number: 5 (lower is better)
Translates to: PGFGVRLATPGRALCGVQSISTC*SCRSEE
Trigger: CTCCTCGGACCTGCAGGACAAGCAGGTGGAGATGCT...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGCAGGCTGCGGCAGTaGAGGGCATCGTCGATGGAC +
Preference number: 5 (lower is better)
Translates to: QQKCPGFGVRLATPGRALCRLRQ*RASSMD
Trigger: GTCCATCGACGATGCCCTCAACTGCCGCAGCCTGCA...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGGTCATCTCGTCCAGTTaGCGGTGGTCCATGCCGTGC +
Preference number: 5 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWVISSS*RWSMPC
Trigger: GCACGGCATGGACCACCGCAAACTGGACGAGATGAC...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGTGTCCGTGTCAGCCTaGTCCTCTTTGTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PRVWCAAGDPRACPVWCAVSVSA*SSLWAR
Trigger: CCTGGCCCACAAAGAGGACAAGGCTGACACGGACAC...TGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGGACTTGCTCTGCCGGTaGGCTGAGCCATTGATGGCC +
Preference number: 5 (lower is better)
Translates to: CPGFGVRLATPGRALCGVDLLCR*AEPLMA
Trigger: GGCCATCAATGGCTCAGCCAACCGGCAGAGCAAGTC...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCCCGAGGCTGTGGAGCTaGCAGGATGGCGATGGAGAG +
Preference number: 5 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAAPRLWS*QDGDGE
Trigger: CTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGG...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTGATGCCGCTGGGTTaGGCCTTGCTGCTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPLMPLG*ALLLVG
Trigger: CCCCACCAGCAGCAAGGCCAAACCCAGCGGCATCAG...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS TCA 90 bp CTGCTGTTGCCCCGGCGGCCCCGAGTACAGCCCATAGGCTCCCACTaGCGTGTGCTCGTAGTGATCCGGGCTCAGGCTGGAACCGGGCAC +
Preference number: 5 (lower is better)
Translates to: LLLPRRPRVQPIGSH*RVLVVIRAQAGTGH
Trigger: GTGCCCGGTTCCAGCCTGAGCCCGGATCACTACGAGCACACGTCAGTGGGAGCCTATGGGCTGTACTCGGGGCCGCCGGGGCAACAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS GCA 90 bp CGCTGTCAAGCTCTAGCTCCAGAAGGGACTGGGTCCTCTCCGAGTTaGAGTGCAGGCACCACATGGCGGCCGCAGTGGGAGCGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: RCQALAPEGTGSSPS*SAGTTWRPQWERAG
Trigger: CCCGGCCCGCTCCCACTGCGGCCGCCATGTGGTGCCTGCACTGCAACTCGGAGAGGACCCAGTCCCTTCTGGAGCTAGAGCTTGACAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273221.8
CDS GCA 90 bp CATCACTGTACGAGGCCGTCATCTCGTCCAGTTTGCGGTGGTCCATaGCGTGCAGGGCTGTCTGGGGTTCGGTGTCCCGGGCCCGCGCCG +
Preference number: 5 (lower is better)
Translates to: HHCTRPSSRPVCGGP*RAGLSGVRCPGPAP
Trigger: CGGCGCGGGCCCGGGACACCGAACCCCAGACAGCCCTGCACGGCATGGACCACCGCAAACTGGACGAGATGACGGCCTCGTACAGTGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS-3UTR CAA 90 bp ATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCTCCTCCTCAGCCTGCTaGCGCAGGATGGAGGTCGAG +
Preference number: 5 (lower is better)
Translates to: MATEVPRVWCAAGDPRACSSSAC*RRMEVE
Trigger: CTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGGA...GCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGAGTGAGCGTGAGCGCTaGATGGCCTCCTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVSERER*MASSSA
Trigger: GGCTGAGGAGGAGGCCATCAAGCGCTCACGCTCACT...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTCATCTCGTCCAGTTaGCGGTGGTCCATGCCGTGC +
Preference number: 5 (lower is better)
Translates to: ATEVPRVWCAAGDPRACPVISSS*RWSMPC
Trigger: GCACGGCATGGACCACCGCAAACTGGACGAGATGAC...AGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCCGGTTGGCTGAGCCATaGATGGCCAAGTGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAARLAEP*MAKWLS
Trigger: GGACAGCCACTTGGCCATCAATGGCTCAGCCAACCG...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTCTGGGTTCCGGAATaGCCGCACCACCCCAGGGTT +
Preference number: 5 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCVWVPE*PHHPRV
Trigger: AACCCTGGGGTGGTGCGGCAATTCCGGAACCCAGAC...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCACGGCTCAGTGTTCCGTaGCCCGACTCCTTTTTGAGG +
Preference number: 5 (lower is better)
Translates to: PRVWCAAGDPRACPVWCARLSVP*PDSFLR
Trigger: CCTCAAAAAGGAGTCGGGCAACGGAACACTGAGCCG...TGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCCGGCTCAGTGTTCCGTaGCCCGACTCCTTTTTGAGG +
Preference number: 5 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPRLSVP*PDSFLR
Trigger: CCTCAAAAAGGAGTCGGGCAACGGAACACTGAGCCG...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTGGGCATGGGCCCCGTAATGAAATCTGGGCCTTaGTTCCACACAACACCAGCC +
Preference number: 5 (lower is better)
Translates to: VPHVGRGQRRVAVGMGPVMKSGP*FHTTPA
Trigger: GGCTGGTGTTGTGTGGAACAAAGGCCCAGATTTCAT...TACGGGGCCCATGCCCACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS CCA 90 bp GCCTCGCCCTCGACGCCGCTGTCAAGCTCTAGCTCCAGAAGGGACTaGGTCCTCTCCGAGTTGCAGTGCAGGCACCACATGGCGGCCGCA +
Preference number: 5 (lower is better)
Translates to: ASPSTPLSSSSSRRD*VLSELQCRHHMAAA
Trigger: TGCGGCCGCCATGTGGTGCCTGCACTGCAACTCGGAGAGGACCCAGTCCCTTCTGGAGCTAGAGCTTGACAGCGGCGTCGAGGGCGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273221.8
CDS-3UTR CAA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCTCCTCCTCAGCCTGCTaGCGCAGGATGGAGGTCGAG +
Preference number: 5 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPSSSAC*RRMEVE
Trigger: CTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGGA...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCAGTGAGCGTGAGCGCTaGATGGCCTCCTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPSERER*MASSSA
Trigger: GGCTGAGGAGGAGGCCATCAAGCGCTCACGCTCACT...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp ATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCGGTTGGCTGAGCCATaGATGGCCAAGTGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: MATEVPRVWCAAGDPRACRLAEP*MAKWLS
Trigger: GGACAGCCACTTGGCCATCAATGGCTCAGCCAACCG...GCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCCCCTTCTCAGGCTTCTaGTTGAAGAGGTTCAGGCCG +
Preference number: 5 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPPFSGF*LKRFRP
Trigger: CGGCCTGAACCTCTTCAACAAGAAGCCTGAGAAGGG...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGGTCTGGGTTCCGGAATaGCCGCACCACCCCAGGGTT +
Preference number: 5 (lower is better)
Translates to: ERWQQKCPGFGVRLATPGVWVPE*PHHPRV
Trigger: AACCCTGGGGTGGTGCGGCAATTCCGGAACCCAGAC...CCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCCGAGGCTGTGGAGCTaGCAGGATGGCGATGGAGAG +
Preference number: 5 (lower is better)
Translates to: PGVPCVVCRCFREPGTPTPRLWS*QDGDGE
Trigger: CTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGG...GGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CAA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGATGGACCCTTCCACATaGCTCTCTAGCGATCCCGCA +
Preference number: 5 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWMDPST*LSSDPA
Trigger: TGCGGGATCGCTAGAGAGCAATGTGGAAGGGTCCAT...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000648114.1
CDS-3UTR CAA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTAGGAGGGAAGATGAGTaGGGCATAGTCTGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCRREDE*GIVWCG
Trigger: CCCACACCAGACTATGCCCAACTCATCTTCCCTCCT...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGGGGGCTTCCCTCTCTaGCTCCCGAATAAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: GEMATEVPRVWCAAGDPRGGFPL*LPNKEP
Trigger: GGGCTCCTTATTCGGGAGCAAGAGAGGGAAGCCCCC...CCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS GCA 90 bp CTCTCGGAGAGTGAGCGTGAGCGCTTGATGGCCTCCTCCTCAGCCTaGTTGCGCAGGATGGAGGTCGAGTGCTGCAGCTTGGGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: LSESERERLMASSSA*LRRMEVECCSLGLR
Trigger: GCGGAGGCCCAAGCTGCAGCACTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGGAGGCCATCAAGCGCTCACGCTCACTCTCCGAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS GCA 90 bp CCCCACTATCCACCGGCCAGCCTCTGTGCCCTGGTCCTGTCTAGCTaGTCCAGACCCTCCTGGCCAAGCGGCCCTCACACACTAGACCCT +
Preference number: 5 (lower is better)
Translates to: PHYPPASLCALVLSS*SRPSWPSGPHTLDP
Trigger: AGGGTCTAGTGTGTGAGGGCCGCTTGGCCAGGAGGGTCTGGAGCAGCTAGACAGGACCAGGGCACAGAGGCTGGCCGGTGGATAGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR CAA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCTCCTCCTCAGCCTGCTaGCGCAGGATGGAGGTCGAG +
Preference number: 5 (lower is better)
Translates to: RTHRGQCHRLAARGCGACSSSAC*RRMEVE
Trigger: CTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGGA...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGAAGTGAGCGTGAGCGCTaGATGGCCTCCTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: EDSATGWQPEAVELAGWRSERER*MASSSA
Trigger: GGCTGAGGAGGAGGCCATCAAGCGCTCACGCTCACT...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCAGCATCTCCACCTGCTaGTCCTGCAGGTCCGAGGAG +
Preference number: 5 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPSISTC*SCRSEE
Trigger: CTCCTCGGACCTGCAGGACAAGCAGGTGGAGATGCT...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGAACTGCATCCTCATGTaGGACAGCACAATCCGGCGT +
Preference number: 5 (lower is better)
Translates to: PGFGVRLATPGRALCGVQNCILM*DSTIRR
Trigger: ACGCCGGATTGTGCTGTCCAACATGAGGATGCAGTT...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGGTGTCCGTGTCAGCCTaGTCCTCTTTGTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ERWQQKCPGFGVRLATPGVSVSA*SSLWAR
Trigger: CCTGGCCCACAAAGAGGACAAGGCTGACACGGACAC...CCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCGGTTGGCTGAGCCATaGATGGCCAAGTGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: PGVPCVVCRCFREPGTPTRLAEP*MAKWLS
Trigger: GGACAGCCACTTGGCCATCAATGGCTCAGCCAACCG...GGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCGACTTGCTCTGCCGGTaGGCTGAGCCATTGATGGCC +
Preference number: 5 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPDLLCR*AEPLMA
Trigger: GGCCATCAATGGCTCAGCCAACCGGCAGAGCAAGTC...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGGAGTTGGACGTGCTGTaGATGCTGTCATTGTCACCG +
Preference number: 5 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWELDVL*MLSLSP
Trigger: CGGTGACAATGACAGCATCAACAGCACGTCCAACTC...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTTGCGGATGACATCGTaGCTAAAGGCAGGCGAGTCC +
Preference number: 5 (lower is better)
Translates to: QQKCPGFGVRLATPGRALLRMTS*LKAGES
Trigger: GGACTCGCCTGCCTTTAGCAACGATGTCATCCGCAA...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CATGGTGGTGCACTGTGTGCCCCACGTGGGCCGAGGGCAGCGGCGGGTGGCCGTACCACCAGGAGGTCGTaGAACAGGAAGATTTCTCGC +
Preference number: 5 (lower is better)
Translates to: HGGALCAPRGPRAAAGGRTTRRS*NRKISR
Trigger: GCGAGAAATCTTCCTGTTCAACGACCTCCTGGTGGT...ACGGCCACCCGCCGCTGCCCTCGGCCCACGTGGGGCACACAGTGCACCACCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR CAA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGACCACCAGGAGGTCGTaGAACAGGAAGATTTCTCGC +
Preference number: 5 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRTTRRS*NRKISR
Trigger: GCGAGAAATCTTCCTGTTCAACGACCTCCTGGTGGT...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGAATTTCTTCCGGTCTaGAGGGTTGGGGGCGTTGAA +
Preference number: 5 (lower is better)
Translates to: PRVWCAAGDPRACPVWCAEFLPV*RVGGVE
Trigger: TTCAACGCCCCCAACCCTCAAGACCGGAAGAAATTC...TGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCCCGAGGCTGTGGAGCTaGCAGGATGGCGATGGAGAG +
Preference number: 5 (lower is better)
Translates to: RTHRGQCHRLAARGCGACPRLWS*QDGDGE
Trigger: CTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGG...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS GCA 90 bp ACCCTCCTGGCCAAGCGGCCCTCACACACTAGACCCTGTGGCTTCTaGACAACCTTGCGCCTGCCTCCTGCCAGGAGACAGCAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: TLLAKRPSHTRPCGF*TTLRLPPARRQQWL
Trigger: CAGCCACTGCTGTCTCCTGGCAGGAGGCAGGCGCAAGGTTGTGCAGAAGCCACAGGGTCTAGTGTGTGAGGGCCGCTTGGCCAGGAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS CCA 90 bp AGGGTGACATCACTGTACGAGGCCGTCATCTCGTCCAGTTTGCGGTaGTCCATGCCGTGCAGGGCTGTCTGGGGTTCGGTGTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: RVTSLYEAVISSSLR*SMPCRAVWGSVSRA
Trigger: GGCCCGGGACACCGAACCCCAGACAGCCCTGCACGGCATGGACCACCGCAAACTGGACGAGATGACGGCCTCGTACAGTGATGTCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CCA 90 bp CTTCCACATAAGGCTCCACACGGCACTGCCATACCCCTTCATGCCTaGCTCGGTGGAGGAGCGAGTGGCCAAGGGGCCCACCACCACTGC +
Preference number: 5 (lower is better)
Translates to: LPHKAPHGTAIPLHA*LGGGASGQGAHHHC
Trigger: GCAGTGGTGGTGGGCCCCTTGGCCACTCGCTCCTCCACCGAGCCAGGCATGAAGGGGTATGGCAGTGCCGTGTGGAGCCTTATGTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR CAA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGCATCTCCACCTGCTaGTCCTGCAGGTCCGAGGAG +
Preference number: 5 (lower is better)
Translates to: RTHRGQCHRLAARGCGACSISTC*SCRSEE
Trigger: CTCCTCGGACCTGCAGGACAAGCAGGTGGAGATGCT...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGAAGCGCTCGAAGTTCTaGTTCATCTGGTACTGGCGA +
Preference number: 5 (lower is better)
Translates to: PGFGVRLATPGRALCGVQKRSKF*FIWYWR
Trigger: TCGCCAGTACCAGATGAACAAGAACTTCGAGCGCTT...CTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAAAGCGCTCGAAGTTCTaGTTCATCTGGTACTGGCGA +
Preference number: 5 (lower is better)
Translates to: PRVWCAAGDPRACPVWCAKRSKF*FIWYWR
Trigger: TCGCCAGTACCAGATGAACAAGAACTTCGAGCGCTT...TGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCCAGTTGATGGTATCGTaGGAGTTGGACGTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPQLMVS*ELDVLL
Trigger: CAACAGCACGTCCAACTCCAACGATACCATCAACTG...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTTCTCAGGCTTCTTGTaGAAGAGGTTCAGGCCGATG +
Preference number: 5 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWFSGFL*KRFRPM
Trigger: CATCGGCCTGAACCTCTTCAACAAGAAGCCTGAGAA...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTTCTCAGGCTTCTTGTaGAAGAGGTTCAGGCCGATG +
Preference number: 5 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPFSGFL*KRFRPM
Trigger: CATCGGCCTGAACCTCTTCAACAAGAAGCCTGAGAA...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCCCTTCTCAGGCTTCTaGTTGAAGAGGTTCAGGCCG +
Preference number: 5 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPPFSGF*LKRFRP
Trigger: CGGCCTGAACCTCTTCAACAAGAAGCCTGAGAAGGG...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGTCTGGGTTCCGGAATaGCCGCACCACCCCAGGGTT +
Preference number: 5 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGVWVPE*PHHPRV
Trigger: AACCCTGGGGTGGTGCGGCAATTCCGGAACCCAGAC...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCGTTTCTGGGGCTTGTTaGGGTCTGGAACCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPVSGAC*GLEPQR
Trigger: TCTTTGAGGTTCCAGACCCAAACAAGCCCCAGAAAC...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGGAATTTCTTCCGGTCTaGAGGGTTGGGGGCGTTGAA +
Preference number: 5 (lower is better)
Translates to: QQKCPGFGVRLATPGRALEFLPV*RVGGVE
Trigger: TTCAACGCCCCCAACCCTCAAGACCGGAAGAAATTC...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCTTGCCCGACTCCTTTTaGAGGCTAGAGCACTGGGAC +
Preference number: 5 (lower is better)
Translates to: RPPGVPCVVCRCFREPGTLPDSF*RLEHWD
Trigger: GTCCCAGTGCTCTAGCCTCAAAAAGGAGTCGGGCAA...GGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp TGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGACAGCCTCCTCAAAATaGCGAGACAGAGTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: CPGFGVRLATPGRALCGVTASSK*RDRVLW
Trigger: CCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGT...CACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CAA 90 bp GGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCATGAAATCTGGGCCTTaGTTCCACACAACACCAGCC +
Preference number: 5 (lower is better)
Translates to: GNRSAPGLVCGWRPPGVPMKSGP*FHTTPA
Trigger: GGCTGGTGTTGTGTGGAACAAAGGCCCAGATTTCAT...GGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGATGAAATCTGGGCCTTaGTTCCACACAACACCAGCC +
Preference number: 5 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWMKSGP*FHTTPA
Trigger: GGCTGGTGTTGTGTGGAACAAAGGCCCAGATTTCAT...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGTTCAACACTACTaGGCTGGCTCACCGTTTCAA +
Preference number: 5 (lower is better)
Translates to: VPRVWCAAGDPRACPVWCAVQHY*AGSPFQ
Trigger: TTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGC...ACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS GCA 90 bp GCCATCCACGGTGGCTGTACAGGGAACCCAATGCTGCCACTGGAGTaGGCACAGCTGGGGCCTGCAGGTTTTGTCTCTCCGGCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: AIHGGCTGNPMLPLE*AQLGPAGFVSPAPP
Trigger: AGGAGGAGCCGGAGAGACAAAACCTGCAGGCCCCAGCTGTGCGCACTCCAGTGGCAGCATTGGGTTCCCTGTACAGCCACCGTGGATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474467.1
CDS CCA 90 bp GCCAGCCTCTGTGCCCTGGTCCTGTCTAGCTGCTCCAGACCCTCCTaGCCAAGCGGCCCTCACACACTAGACCCTGTGGCTTCTGCACAA +
Preference number: 5 (lower is better)
Translates to: ASLCALVLSSCSRPS*PSGPHTLDPVASAQ
Trigger: TTGTGCAGAAGCCACAGGGTCTAGTGTGTGAGGGCCGCTTGGCCAGGAGGGTCTGGAGCAGCTAGACAGGACCAGGGCACAGAGGCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS-3UTR CAA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAAGCATCTCCACCTGCTaGTCCTGCAGGTCCGAGGAG +
Preference number: 5 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGSISTC*SCRSEE
Trigger: CTCCTCGGACCTGCAGGACAAGCAGGTGGAGATGCT...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp ATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCAACTGCATCCTCATGTaGGACAGCACAATCCGGCGT +
Preference number: 5 (lower is better)
Translates to: MATEVPRVWCAAGDPRACNCILM*DSTIRR
Trigger: ACGCCGGATTGTGCTGTCCAACATGAGGATGCAGTT...GCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGGAGGGGGCCGGAGACTaGAGGGTGGTGGGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: PGRNSLLKIARQSALGSLEGAGD*RVVGSL
Trigger: CAGCGAGCCCACCACCCTCAAGTCTCCGGCCCCCTC...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGAGTTGGACGTGCTGTaGATGCTGTCATTGTCACCG +
Preference number: 5 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCELDVL*MLSLSP
Trigger: CGGTGACAATGACAGCATCAACAGCACGTCCAACTC...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp AGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTTTGCGGATGACATCGTaGCTAAAGGCAGGCGAGTCC +
Preference number: 5 (lower is better)
Translates to: RWQQKCPGFGVRLATPGRLRMTS*LKAGES
Trigger: GGACTCGCCTGCCTTTAGCAACGATGTCATCCGCAA...ACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCTTGCGGATGACATCGTaGCTAAAGGCAGGCGAGTCC +
Preference number: 5 (lower is better)
Translates to: PGVPCVVCRCFREPGTPTLRMTS*LKAGES
Trigger: GGACTCGCCTGCCTTTAGCAACGATGTCATCCGCAA...GGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGCCCTTCTCAGGCTTCTaGTTGAAGAGGTTCAGGCCG +
Preference number: 5 (lower is better)
Translates to: GEMATEVPRVWCAAGDPRPFSGF*LKRFRP
Trigger: CGGCCTGAACCTCTTCAACAAGAAGCCTGAGAAGGG...CCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGGACACATGGTCCTCATaGGTCTTTAGCTCTCGCTTA +
Preference number: 5 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRDTWSS*VFSSRL
Trigger: TAAGCGAGAGCTAAAGACCAATGAGGACCATGTGTC...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGGTTTCTGGGGCTTGTTaGGGTCTGGAACCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: QQKCPGFGVRLATPGRALVSGAC*GLEPQR
Trigger: TCTTTGAGGTTCCAGACCCAAACAAGCCCCAGAAAC...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCTTCTTCTGGAAGATCTaGGTGACCACCAGGAGGTCG +
Preference number: 5 (lower is better)
Translates to: RPPGVPCVVCRCFREPGTFFWKI*VTTRRS
Trigger: CGACCTCCTGGTGGTCACCAAGATCTTCCAGAAGAA...GGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTTTCTTCTGGAAGATCTaGGTGACCACCAGGAGGTCG +
Preference number: 5 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCFFWKI*VTTRRS
Trigger: CGACCTCCTGGTGGTCACCAAGATCTTCCAGAAGAA...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGAATTTCTTCCGGTCTaGAGGGTTGGGGGCGTTGAA +
Preference number: 5 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCEFLPV*RVGGVE
Trigger: TTCAACGCCCCCAACCCTCAAGACCGGAAGAAATTC...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGAAAAAGACCCGAGAATaGATGAGTCGGAGACACCAG +
Preference number: 5 (lower is better)
Translates to: PGLVCGWRPPGVPCVVCRKKTRE*MSRRHQ
Trigger: CTGGTGTCTCCGACTCATCAATTCTCGGGTCTTTTT...CCTGCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CAA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCAGGAGGGAAGATGAGTaGGGCATAGTCTGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPRREDE*GIVWCG
Trigger: CCCACACCAGACTATGCCCAACTCATCTTCCCTCCT...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCCTCCTGGGGCTCCGGTaGGGCCGTGAGGGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: PVALSQHPASAVNICCLFLLGLR*GREGQR
Trigger: CCTCTGCCCCTCACGGCCCAACCGGAGCCCCAGGAG...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CAA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTACACACCGCCCTGGGTaGCTAAACGCTAAAGTCAAC +
Preference number: 5 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCTHRPG*LNAKVN
Trigger: GTTGACTTTAGCGTTTAGCAACCCAGGGCGGTGTGT...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS TCA 90 bp GGTCCGAGGAGAGCTCATAGCTCTCGGAGAGTGAGCGTGAGCGCTTaGTGGCCTCCTCCTCAGCCTGCTTGCGCAGGATGGAGGTCGAGT +
Preference number: 5 (lower is better)
Translates to: GPRRAHSSRRVSVSA*WPPPQPACAGWRSS
Trigger: ACTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGGAGGCCATCAAGCGCTCACGCTCACTCTCCGAGAGCTATGAGCTCTCCTCGGACC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS-3UTR CAA 90 bp TGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTCGAGTGCTGCAGCTaGGGCCTCCGCGTGCGCTGC +
Preference number: 5 (lower is better)
Translates to: WGRQFNTTWLAHRFKADGVECCS*GLRVRC
Trigger: GCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGAC...ACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR CAA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGAGCATCTCCACCTGCTaGTCCTGCAGGTCCGAGGAG +
Preference number: 5 (lower is better)
Translates to: AARGCGACRMAMERESFLSISTC*SCRSEE
Trigger: CTCCTCGGACCTGCAGGACAAGCAGGTGGAGATGCT...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GACCCCCGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCAAGCGCTCGAAGTTCTaGTTCATCTGGTACTGGCGA +
Preference number: 5 (lower is better)
Translates to: DPRACPVWCAGVSGSLGPKRSKF*FIWYWR
Trigger: TCGCCAGTACCAGATGAACAAGAACTTCGAGCGCTT...GGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCGGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCGTCATCTCGTCCAGTTaGCGGTGGTCCATGCCGTGC +
Preference number: 5 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSVISSS*RWSMPC
Trigger: GCACGGCATGGACCACCGCAAACTGGACGAGATGAC...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGCGGTTGGCTGAGCCATaGATGGCCAAGTGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: AARGCGACRMAMERESFLRLAEP*MAKWLS
Trigger: GGACAGCCACTTGGCCATCAATGGCTCAGCCAACCG...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCGACTTGCTCTGCCGGTaGGCTGAGCCATTGATGGCC +
Preference number: 5 (lower is better)
Translates to: LTSLKEHTECGGKPREGLDLLCR*AEPLMA
Trigger: GGCCATCAATGGCTCAGCCAACCGGCAGAGCAAGTC...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GCTGGGTGGCCCCCATGGGGGCCGTGGTGGTACTGGTGTGCGTGCTGGATGTGCCAGTTGATGGTATCGTaGGAGTTGGACGTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: AGWPPWGPWWYWCACWMCQLMVS*ELDVLL
Trigger: CAACAGCACGTCCAACTCCAACGATACCATCAACTG...GCACATCCAGCACGCACACCAGTACCACCACGGCCCCCATGGGGGCCACCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS-3UTR CAA 90 bp GATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGGTTTCTGGGGCTTGTTaGGGTCTGGAACCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: DGNRSAPGLVCGWRPPGVVSGAC*GLEPQR
Trigger: TCTTTGAGGTTCCAGACCCAAACAAGCCCCAGAAAC...CACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCTTCTTCTGGAAGATCTaGGTGACCACCAGGAGGTCG +
Preference number: 5 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPFFWKI*VTTRRS
Trigger: CGACCTCCTGGTGGTCACCAAGATCTTCCAGAAGAA...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTCTGAGCTCCTGGGGCTCCGGTaGGGCCGTGAGGGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: GSSTLLGWLTVSRLMVSELLGLR*GREGQR
Trigger: CCTCTGCCCCTCACGGCCCAACCGGAGCCCCAGGAG...CTCAGACACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS TCA 90 bp GGGCGAGATGGACACTCTCGTGTTGATGTAGCTCTCCGGCGCATGTaGGGACTGCTAATGATGGACCCCGGCTTCCGAGAGGTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: GRDGHSRVDVALRRM*GLLMMDPGFREVPQ
Trigger: CTGCGGGACCTCTCGGAAGCCGGGGTCCATCATTAGCAGTCCTCACATGCGCCGGAGAGCTACATCAACACGAGAGTGTCCATCTCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS CCA 90 bp CGGCTCAGTGTTCCGTTGCCCGACTCCTTTTTGAGGCTAGAGCACTaGGACATGCTGGGCCGCACGACGCCTTTCTGCTTCTCGAGCTCC +
Preference number: 5 (lower is better)
Translates to: RLSVPLPDSFLRLEH*DMLGRTTPFCFSSS
Trigger: GGAGCTCGAGAAGCAGAAAGGCGTCGTGCGGCCCAGCATGTCCCAGTGCTCTAGCCTCAAAAAGGAGTCGGGCAACGGAACACTGAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000648114.1
ENST00000648386.1
CDS-3UTR CAA 90 bp TCACAGCTGACGCCAGATGACATGCAGCAGTTTAACGCTTCCAGGTCGGAACAGGAGGGGGCCGGAGACTaGAGGGTGGTGGGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: SQLTPDDMQQFNASRSEQEGAGD*RVVGSL
Trigger: CAGCGAGCCCACCACCCTCAAGTCTCCGGCCCCCTC...CTGTTCCGACCTGGAAGCGTTAAACTGCTGCATGTCATCTGGCGTCAGCTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGTTCTCAGGCTTCTTGTaGAAGAGGTTCAGGCCGATG +
Preference number: 5 (lower is better)
Translates to: GEMATEVPRVWCAAGDPRFSGFL*KRFRPM
Trigger: CATCGGCCTGAACCTCTTCAACAAGAAGCCTGAGAA...CCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGTGTGCAAGTTTATTAACACTTaGATATCTGCTCCGGGGACA +
Preference number: 5 (lower is better)
Translates to: APGLVCGWRPPGVPCVVCKFINT*ISAPGT
Trigger: TGTCCCCGGAGCAGATATCAAAGTGTTAATAAACTT...GCACACCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp TGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCCGGCTCAGTGTTCCGTaGCCCGACTCCTTTTTGAGG +
Preference number: 5 (lower is better)
Translates to: WQPEAVELAGWRWRGRVSRLSVP*PDSFLR
Trigger: CCTCAAAAAGGAGTCGGGCAACGGAACACTGAGCCG...GGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCCGGCTCAGTGTTCCGTaGCCCGACTCCTTTTTGAGG +
Preference number: 5 (lower is better)
Translates to: LTSLKEHTECGGKPREGLRLSVP*PDSFLR
Trigger: CCTCAAAAAGGAGTCGGGCAACGGAACACTGAGCCG...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATCTGAGGGCGCTGCGCTaGAGGCCCTCACCGCTGGCA +
Preference number: 5 (lower is better)
Translates to: DACCVQSRCDCTQKGDADLRALR*RPSPLA
Trigger: TGCCAGCGGTGAGGGCCTCAAGCGCAGCGCCCTCAG...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCAGAGGAGGGAAGATGAGTaGGGCATAGTCTGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: EHTECGGKPREGLSGFQQRREDE*GIVWCG
Trigger: CCCACACCAGACTATGCCCAACTCATCTTCCCTCCT...CTGCTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CAA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCCCGCGTGCGCTGCTGTaGCCCCGGCGGCCCCGAGTA +
Preference number: 5 (lower is better)
Translates to: DVFTVTPIHFANAQHAERPRALL*PRRPRV
Trigger: TACTCGGGGCCGCCGGGGCAACAGCAGCGCACGCGG...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp AGAGGGGAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCAACTGCATCCTCATGTaGGACAGCACAATCCGGCGT +
Preference number: 5 (lower is better)
Translates to: RGERWQQKCPGFGVRLATNCILM*DSTIRR
Trigger: ACGCCGGATTGTGCTGTCCAACATGAGGATGCAGTT...GGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTCCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAAACTGCATCCTCATGTaGGACAGCACAATCCGGCGT +
Preference number: 5 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGNCILM*DSTIRR
Trigger: ACGCCGGATTGTGCTGTCCAACATGAGGATGCAGTT...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CTGGAGTGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTTGCAGGCTGCGGCAGTaGAGGGCATCGTCGATGGAC +
Preference number: 5 (lower is better)
Translates to: LEWGRQFNTTWLAHRFKACRLRQ*RASSMD
Trigger: GTCCATCGACGATGCCCTCAACTGCCGCAGCCTGCA...AGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCACTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR CAA 90 bp GAGAGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGGACACATGGTCCTCATaGGTCTTTAGCTCTCGCTTA +
Preference number: 5 (lower is better)
Translates to: ERWQQKCPGFGVRLATPGDTWSS*VFSSRL
Trigger: TAAGCGAGAGCTAAAGACCAATGAGGACCATGTGTC...CCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTGTGGAAGTTTATTAACACTTaGATATCTGCTCCGGGGACA +
Preference number: 5 (lower is better)
Translates to: EVPRVWCAAGDPRACPVWKFINT*ISAPGT
Trigger: TGTCCCCGGAGCAGATATCAAAGTGTTAATAAACTT...CCACACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATCACCCTGCTCAGTGTaGCAATGCTGCCTTGACTAT +
Preference number: 5 (lower is better)
Translates to: EDSATGWQPEAVELAGWRSPCSV*QCCLDY
Trigger: ATAGTCAAGGCAGCATTGCAACACTGAGCAGGGTGA...TCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GCACTGACGGCTGCAGTGGCTCGAAAGGCTGAAACTACAAAGTATGGCCCGTGGCTACCTGGGCCCACCTaGGGGTTTTTCCCTCCCGTC +
Preference number: 5 (lower is better)
Translates to: ALTAAVARKAETTKYGPWLPGPT*GFFPPV
Trigger: GACGGGAGGGAAAAACCCCAAGGTGGGCCCAGGTAG...CCACGGGCCATACTTTGTAGTTTCAGCCTTTCGAGCCACTGCAGCCGTCAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS CCA 90 bp CCTTCCACTCTGCTGATGGTAGTGCACCTCTGTAGCCATCCACGGTaGCTGTACAGGGAACCCAATGCTGCCACTGGAGTGCGCACAGCT +
Preference number: 5 (lower is better)
Translates to: PSTLLMVVHLCSHPR*LYREPNAATGVRTA
Trigger: AGCTGTGCGCACTCCAGTGGCAGCATTGGGTTCCCTGTACAGCCACCGTGGATGGCTACAGAGGTGCACTACCATCAGCAGAGTGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474467.1
CDS-3UTR CAA 90 bp TCGGAGACACCAGGGCGCTTCCCTGACAGCCCAGCCTGGACCCAATCACACGGTAAGCGCTCGAAGTTCTaGTTCATCTGGTACTGGCGA +
Preference number: 5 (lower is better)
Translates to: SETPGRFPDSPAWTQSHGKRSKF*FIWYWR
Trigger: TCGCCAGTACCAGATGAACAAGAACTTCGAGCGCTT...ACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGGGAAGCGCCCTGGTGTCTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp AAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGAACTGCATCCTCATGTaGGACAGCACAATCCGGCGT +
Preference number: 5 (lower is better)
Translates to: KEHTECGGKPREGLSGFQNCILM*DSTIRR
Trigger: ACGCCGGATTGTGCTGTCCAACATGAGGATGCAGTT...CTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGGTCATCTCGTCCAGTTaGCGGTGGTCCATGCCGTGC +
Preference number: 5 (lower is better)
Translates to: GGGSSTLLGWLTVSRLMVVISSS*RWSMPC
Trigger: GCACGGCATGGACCACCGCAAACTGGACGAGATGAC...CACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR CAA 90 bp GGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGCGGTTGGCTGAGCCATaGATGGCCAAGTGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: GGGSSTLLGWLTVSRLMVRLAEP*MAKWLS
Trigger: GGACAGCCACTTGGCCATCAATGGCTCAGCCAACCG...CACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR CAA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGACAGTTGATGGTATCGTaGGAGTTGGACGTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGQLMVS*ELDVLL
Trigger: CAACAGCACGTCCAACTCCAACGATACCATCAACTG...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGTTTCTGGGGCTTGTTaGGGTCTGGAACCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGVSGAC*GLEPQR
Trigger: TCTTTGAGGTTCCAGACCCAAACAAGCCCCAGAAAC...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCACCACCAGGAGGTCGTaGAACAGGAAGATTTCTCGC +
Preference number: 5 (lower is better)
Translates to: LTSLKEHTECGGKPREGLTTRRS*NRKISR
Trigger: GCGAGAAATCTTCCTGTTCAACGACCTCCTGGTGGT...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CTCACTAGCCTGAAGGAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCTTCTTCTGGAAGATCTaGGTGACCACCAGGAGGTCG +
Preference number: 5 (lower is better)
Translates to: LTSLKEHTECGGKPREGLFFWKI*VTTRRS
Trigger: CGACCTCCTGGTGGTCACCAAGATCTTCCAGAAGAA...GAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTCCTTCAGGCTAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGGAATTTCTTCCGGTCTaGAGGGTTGGGGGCGTTGAA +
Preference number: 5 (lower is better)
Translates to: AARGCGACRMAMERESFLEFLPV*RVGGVE
Trigger: TTCAACGCCCCCAACCCTCAAGACCGGAAGAAATTC...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTCTAGATTGCTGTATTaGCTCTCTCTGGAGATTAAC +
Preference number: 5 (lower is better)
Translates to: QQKCPGFGVRLATPGRALSRLLY*LSLEIN
Trigger: GTTAATCTCCAGAGAGAGCAAATACAGCAATCTAGA...CAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CAA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAAAAAGACCCGAGAATaGATGAGTCGGAGACACCAG +
Preference number: 5 (lower is better)
Translates to: RTHRGQCHRLAARGCGACKKTRE*MSRRHQ
Trigger: CTGGTGTCTCCGACTCATCAATTCTCGGGTCTTTTT...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCAGACAGCCTCCTCAAAATaGCGAGACAGAGTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: EHTECGGKPREGLSGFQQTASSK*RDRVLW
Trigger: CCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGT...CTGCTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp TCTCCTCCTGCCGTCCGGCCACGGCTCACCACGCTGTCCACTGGGAACGCGGCCAACCATGGTTTTACATaGATAGAGTCTGTTGCCACT +
Preference number: 5 (lower is better)
Translates to: SPPAVRPRLTTLSTGNAANHGFT*IESVAT
Trigger: AGTGGCAACAGACTCTATCAATGTAAAACCATGGTT...GGCCGCGTTCCCAGTGGACAGCGTGGTGAGCCGTGGCCGGACGGCAGGAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GGACGTTATGGTGTTGGGGAGACGAGGATGAGAGCTGGTCACTTTCATGTTGGAAGAAGTGCCCCGGGTTaGGTGTGCGGCTGGCGACCC +
Preference number: 5 (lower is better)
Translates to: GRYGVGETRMRAGHFHVGRSAPG*VCGWRP
Trigger: GGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCT...TCCAACATGAAAGTGACCAGCTCTCATCCTCGTCTCCCCAACACCATAACGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CAA 90 bp AGATGGCAACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTCTTGTAAGGTGGGTATaGCTAATGTGGACTGAAACG +
Preference number: 5 (lower is better)
Translates to: RWQQKCPGFGVRLATPGRLVRWV*LMWTET
Trigger: CGTTTCAGTCCACATTAGCAATACCCACCTTACAAG...ACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTTGCCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CAA 90 bp TCACAGCTGACGCCAGATGACATGCAGCAGTTTAACGCTTCCAGGTCGGAACAGTGCAGGCTGCGGCAGTaGAGGGCATCGTCGATGGAC +
Preference number: 5 (lower is better)
Translates to: SQLTPDDMQQFNASRSEQCRLRQ*RASSMD
Trigger: GTCCATCGACGATGCCCTCAACTGCCGCAGCCTGCA...CTGTTCCGACCTGGAAGCGTTAAACTGCTGCATGTCATCTGGCGTCAGCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCGTGTCCGTGTCAGCCTaGTCCTCTTTGTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PVALSQHPASAVNICCLFVSVSA*SSLWAR
Trigger: CCTGGCCCACAAAGAGGACAAGGCTGACACGGACAC...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGGTCTGGGTTCCGGAATaGCCGCACCACCCCAGGGTT +
Preference number: 5 (lower is better)
Translates to: VQSRCDCTQKGDADASEWVWVPE*PHHPRV
Trigger: AACCCTGGGGTGGTGCGGCAATTCCGGAACCCAGAC...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp AACAGAAGTGCCCCGGGTTTGGTGTGCGGCTGGCGACCCCCGGGCGTGCCCTGTAAGTTTATTAACACTTaGATATCTGCTCCGGGGACA +
Preference number: 5 (lower is better)
Translates to: NRSAPGLVCGWRPPGVPCKFINT*ISAPGT
Trigger: TGTCCCCGGAGCAGATATCAAAGTGTTAATAAACTT...ACAGGGCACGCCCGGGGGTCGCCAGCCGCACACCAAACCCGGGGCACTTCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS-3UTR CAA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCCTGAGGGCGCTGCGCTaGAGGCCCTCACCGCTGGCA +
Preference number: 5 (lower is better)
Translates to: DVFTVTPIHFANAQHAERLRALR*RPSPLA
Trigger: TGCCAGCGGTGAGGGCCTCAAGCGCAGCGCCCTCAG...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCAGTCACGCCAATACATTTaGCAAACGCACAACACGCAG +
Preference number: 5 (lower is better)
Translates to: EHTECGGKPREGLSGFQQSRQYI*QTHNTQ
Trigger: CTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGA...CTGCTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAGAGGGAGAGTTTCCTGTCACCCTGCTCAGTGTaGCAATGCTGCCTTGACTAT +
Preference number: 5 (lower is better)
Translates to: AARGCGACRMAMERESFLSPCSV*QCCLDY
Trigger: ATAGTCAAGGCAGCATTGCAACACTGAGCAGGGTGA...CAGGAAACTCTCCCTCTCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GATGCATGCTGTGTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGTGTCCGTGTCAGCCTaGTCCTCTTTGTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: DACCVQSRCDCTQKGDADVSVSA*SSLWAR
Trigger: CCTGGCCCACAAAGAGGACAAGGCTGACACGGACAC...ATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCACACAGCATGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGGACTTGCTCTGCCGGTaGGCTGAGCCATTGATGGCC +
Preference number: 5 (lower is better)
Translates to: VQSRCDCTQKGDADASEWDLLCR*AEPLMA
Trigger: GGCCATCAATGGCTCAGCCAACCGGCAGAGCAAGTC...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGTTGCCCGACTCCTTTTaGAGGCTAGAGCACTGGGAC +
Preference number: 5 (lower is better)
Translates to: PGRNSLLKIARQSALGSLLPDSF*RLEHWD
Trigger: GTCCCAGTGCTCTAGCCTCAAAAAGGAGTCGGGCAA...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCTTGCGGATGACATCGTaGCTAAAGGCAGGCGAGTCC +
Preference number: 5 (lower is better)
Translates to: PVALSQHPASAVNICCLFLRMTS*LKAGES
Trigger: GGACTCGCCTGCCTTTAGCAACGATGTCATCCGCAA...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCCCCTTCTCAGGCTTCTaGTTGAAGAGGTTCAGGCCG +
Preference number: 5 (lower is better)
Translates to: PVALSQHPASAVNICCLFPFSGF*LKRFRP
Trigger: CGGCCTGAACCTCTTCAACAAGAAGCCTGAGAAGGG...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp AGGACACACCGAGGACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAAGTTTATTAACACTTaGATATCTGCTCCGGGGACA +
Preference number: 5 (lower is better)
Translates to: RTHRGQCHRLAARGCGACKFINT*ISAPGT
Trigger: TGTCCCCGGAGCAGATATCAAAGTGTTAATAAACTT...GCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGTCCTCGGTGTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp ACAGTGCCACAGGCTGGCAGCCCGAGGCTGTGGAGCTTGCAGGATGGCGATGGAAGGCTAAACTCTAGATaGCTGTATTTGCTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: TVPQAGSPRLWSLQDGDGRLNSR*LYLLSL
Trigger: CAGAGAGAGCAAATACAGCAATCTAGAGTTTAGCCT...TCCATCGCCATCCTGCAAGCTCCACAGCCTCGGGCTGCCAGCCTGTGGCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CGGGCGTGCCCTGTGTGGTGTGCAGGTGTTTCAGGGAGCCTGGGACCCCTACCCTCTTCGTTTTCTAGGTaGGGTTTTCATATGCATGTA +
Preference number: 5 (lower is better)
Translates to: RACPVWCAGVSGSLGPLPSSFSR*GFHMHV
Trigger: TACATGCATATGAAAACCCAACCTAGAAAACGAAGA...GGGTAGGGGTCCCAGGCTCCCTGAAACACCTGCACACCACACAGGGCACGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS TCA 90 bp GGGCGAGATGGACACTCTCGTGTTGATGTAGCTCTCCGGCGCATGTaGGGACTGCTAATGATGGACCCTTCCACATTGCTCTCTAGCGAT +
Preference number: 5 (lower is better)
Translates to: GRDGHSRVDVALRRM*GLLMMDPSTLLSSD
Trigger: ATCGCTAGAGAGCAATGTGGAAGGGTCCATCATTAGCAGTCCTCACATGCGCCGGAGAGCTACATCAACACGAGAGTGTCCATCTCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000648114.1
CDS-3UTR CAA 90 bp TGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTGGTACGGTGATCTCAATGGTCGAGTGCTGCAGCTaGGGCCTCCGCGTGCGCTGC +
Preference number: 5 (lower is better)
Translates to: WRLTKCLVCRFAGTVISMVECCS*GLRVRC
Trigger: GCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGAC...CATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp TGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGAGTTGGACGTGCTGTaGATGCTGTCATTGTCACCG +
Preference number: 5 (lower is better)
Translates to: WGRQFNTTWLAHRFKADGELDVL*MLSLSP
Trigger: CGGTGACAATGACAGCATCAACAGCACGTCCAACTC...ACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR CAA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGTTGCGGATGACATCGTaGCTAAAGGCAGGCGAGTCC +
Preference number: 5 (lower is better)
Translates to: VQSRCDCTQKGDADASEWLRMTS*LKAGES
Trigger: GGACTCGCCTGCCTTTAGCAACGATGTCATCCGCAA...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGTTCTCAGGCTTCTTGTaGAAGAGGTTCAGGCCGATG +
Preference number: 5 (lower is better)
Translates to: PGRNSLLKIARQSALGSLFSGFL*KRFRPM
Trigger: CATCGGCCTGAACCTCTTCAACAAGAAGCCTGAGAA...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGCCCTTCTCAGGCTTCTaGTTGAAGAGGTTCAGGCCG +
Preference number: 5 (lower is better)
Translates to: VQSRCDCTQKGDADASEWPFSGF*LKRFRP
Trigger: CGGCCTGAACCTCTTCAACAAGAAGCCTGAGAAGGG...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCACCACCAGGAGGTCGTaGAACAGGAAGATTTCTCGC +
Preference number: 5 (lower is better)
Translates to: PVALSQHPASAVNICCLFTTRRS*NRKISR
Trigger: GCGAGAAATCTTCCTGTTCAACGACCTCCTGGTGGT...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCTTCTTCTGGAAGATCTaGGTGACCACCAGGAGGTCG +
Preference number: 5 (lower is better)
Translates to: PVALSQHPASAVNICCLFFFWKI*VTTRRS
Trigger: CGACCTCCTGGTGGTCACCAAGATCTTCCAGAAGAA...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTGTCTGAGTTGCCCGACTCCTTTTaGAGGCTAGAGCACTGGGAC +
Preference number: 5 (lower is better)
Translates to: GSSTLLGWLTVSRLMVSELPDSF*RLEHWD
Trigger: GTCCCAGTGCTCTAGCCTCAAAAAGGAGTCGGGCAA...CTCAGACACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000618604.4
CDS-3UTR CAA 90 bp AAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGAACAACCTAAAGGTTCTGAGGGCGCTGCGCTaGAGGCCCTCACCGCTGGCA +
Preference number: 5 (lower is better)
Translates to: KSNSVPNGLNLFWNNLKVLRALR*RPSPLA
Trigger: TGCCAGCGGTGAGGGCCTCAAGCGCAGCGCCCTCAG...AACCTTTAGGTTGTTCCAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GAACACACTGAGTGCGGCGGGAAACCCCGGGAAGGGCTCAGTGGGTTCCAGCAGTCTAGATTGCTGTATTaGCTCTCTCTGGAGATTAAC +
Preference number: 5 (lower is better)
Translates to: EHTECGGKPREGLSGFQQSRLLY*LSLEIN
Trigger: GTTAATCTCCAGAGAGAGCAAATACAGCAATCTAGA...CTGCTGGAACCCACTGAGCCCTTCCCGGGGTTTCCCGCCGCACTCAGTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCAAGCGCTCGAAGTTCTaGTTCATCTGGTACTGGCGA +
Preference number: 5 (lower is better)
Translates to: PVALSQHPASAVNICCLFKRSKF*FIWYWR
Trigger: TCGCCAGTACCAGATGAACAAGAACTTCGAGCGCTT...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCGTCATCTCGTCCAGTTaGCGGTGGTCCATGCCGTGC +
Preference number: 5 (lower is better)
Translates to: DVFTVTPIHFANAQHAERVISSS*RWSMPC
Trigger: GCACGGCATGGACCACCGCAAACTGGACGAGATGAC...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGGAGTTGGACGTGCTGTaGATGCTGTCATTGTCACCG +
Preference number: 5 (lower is better)
Translates to: VQSRCDCTQKGDADASEWELDVL*MLSLSP
Trigger: CGGTGACAATGACAGCATCAACAGCACGTCCAACTC...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGTCACGCCAATACATTTaGCAAACGCACAACACGCAG +
Preference number: 5 (lower is better)
Translates to: PGRNSLLKIARQSALGSLSRQYI*QTHNTQ
Trigger: CTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGA...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CCTGACAGCCCAGCCTGGACCCAATCACACGGTCCCATGCTGTTTCTTTCTGAGTCACGCCAATACATTTaGCAAACGCACAACACGCAG +
Preference number: 5 (lower is better)
Translates to: PDSPAWTQSHGPMLFLSESRQYI*QTHNTQ
Trigger: CTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGA...CTCAGAAAGAAACAGCATGGGACCGTGTGATTGGGTCCAGGCTGGGCTGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACCAGGCCTCCTCCCTCTaGTCCTGTGCTCAGCACCCC +
Preference number: 5 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHQASSL*SCAQHP
Trigger: GGGGTGCTGAGCACAGGACAAGAGGGAGGAGGCCTG...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACCTGATGCCGCTGGGTTaGGCCTTGCTGCTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHLMPLG*ALLLVG
Trigger: CCCCACCAGCAGCAAGGCCAAACCCAGCGGCATCAG...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CAA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCGCAGTTCAACACTACTaGGCTGGCTCACCGTTTCAA +
Preference number: 5 (lower is better)
Translates to: PVALSQHPASAVNICCLFAVQHY*AGSPFQ
Trigger: TTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGC...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CAA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGTCCTCCTCAGCCTGCTaGCGCAGGATGGAGGTCGAG +
Preference number: 5 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQSSSAC*RRMEVE
Trigger: CTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGGA...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGAGTGAGCGTGAGCGCTaGATGGCCTCCTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQSERER*MASSSA
Trigger: GGCTGAGGAGGAGGCCATCAAGCGCTCACGCTCACT...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGTGCAGGCTGCGGCAGTaGAGGGCATCGTCGATGGAC +
Preference number: 5 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQCRLRQ*RASSMD
Trigger: GTCCATCGACGATGCCCTCAACTGCCGCAGCCTGCA...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp TGTCCCTTGAAGTCTCTGAACAGTCTGGGGATTCAGGACCTGATTCTAATTGCTGTGTCCGTGTCAGCCTaGTCCTCTTTGTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: CPLKSLNSLGIQDLILIAVSVSA*SSLWAR
Trigger: CCTGGCCCACAAAGAGGACAAGGCTGACACGGACAC...AGCAATTAGAATCAGGTCCTGAATCCCCAGACTGTTCAGAGACTTCAAGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGCAGTTGATGGTATCGTaGGAGTTGGACGTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: VQSRCDCTQKGDADASEWQLMVS*ELDVLL
Trigger: CAACAGCACGTCCAACTCCAACGATACCATCAACTG...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACGTCTGGGTTCCGGAATaGCCGCACCACCCCAGGGTT +
Preference number: 5 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHVWVPE*PHHPRV
Trigger: AACCCTGGGGTGGTGCGGCAATTCCGGAACCCAGAC...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGGTTTCTGGGGCTTGTTaGGGTCTGGAACCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: VQSRCDCTQKGDADASEWVSGAC*GLEPQR
Trigger: TCTTTGAGGTTCCAGACCCAAACAAGCCCCAGAAAC...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGAACAAAGTGCTTGGTTaGCAGATTTGCTGGTACGGT +
Preference number: 5 (lower is better)
Translates to: PGRNSLLKIARQSALGSLNKVLG*QICWYG
Trigger: ACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTT...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGCAGGCCTCCTCCCTCTaGTCCTGTGCTCAGCACCCC +
Preference number: 5 (lower is better)
Translates to: SVPIHYCYPSERAILCQTQASSL*SCAQHP
Trigger: GGGGTGCTGAGCACAGGACAAGAGGGAGGAGGCCTG...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACGGGGGCTTCCCTCTCTaGCTCCCGAATAAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHGGFPL*LPNKEP
Trigger: GGGCTCCTTATTCGGGAGCAAGAGAGGGAAGCCCCC...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CAA 90 bp TGGGGGAGGCAGTTCAACACTACTTGGCTGGCTCACCGTTTCAAGGCTGATGGTCTGGTCACTTTCATGTaGGAGATGAACACTTCTGCC +
Preference number: 5 (lower is better)
Translates to: WGRQFNTTWLAHRFKADGLVTFM*EMNTSA
Trigger: GGCAGAAGTGTTCATCTCCAACATGAAAGTGACCAG...ACCATCAGCCTTGAAACGGTGAGCCAGCCAAGTAGTGTTGAACTGCCTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CAA 90 bp CCAGGTCGGAACAGCCTCCTCAAAATTGCGAGACAGAGTGCTTTGGGGAGCCTGAGGCTAAACTCTAGATaGCTGTATTTGCTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: PGRNSLLKIARQSALGSLRLNSR*LYLLSL
Trigger: CAGAGAGAGCAAATACAGCAATCTAGAGTTTAGCCT...CAGGCTCCCCAAAGCACTCTGTCTCGCAATTTTGAGGAGGCTGTTCCGACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp TCTGTTCCTATTCATTACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGTGGGTCCTCTCCGAGTaGCAGTGCAGGCACCACATG +
Preference number: 5 (lower is better)
Translates to: SVPIHYCYPSERAILCQTWVLSE*QCRHHM
Trigger: CATGTGGTGCCTGCACTGCAACTCGGAGAGGACCCA...CGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGTAATGAATAGGAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273221.8
CDS-3UTR CAA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCGAGTTGGACGTGCTGTaGATGCTGTCATTGTCACCG +
Preference number: 5 (lower is better)
Translates to: DVFTVTPIHFANAQHAERELDVL*MLSLSP
Trigger: CGGTGACAATGACAGCATCAACAGCACGTCCAACTC...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGCGGCTCAGTGTTCCGTaGCCCGACTCCTTTTTGAGG +
Preference number: 5 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQRLSVP*PDSFLR
Trigger: CCTCAAAAAGGAGTCGGGCAACGGAACACTGAGCCG...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CCCGTGGCGCTGAGTCAACACCCAGCATCAGCTGTGAACATCTGCTGTCTTTTCAGATTAACAAAGTGCTaGGTTTGCAGATTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: PVALSQHPASAVNICCLFRLTKC*VCRFAG
Trigger: ACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCT...GAAAAGACAGCAGATGTTCACAGCTGATGCTGGGTGTTGACTCAGCGCCACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACATGGACCCTTCCACATaGCTCTCTAGCGATCCCGCA +
Preference number: 5 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHMDPST*LSSDPA
Trigger: TGCGGGATCGCTAGAGAGCAATGTGGAAGGGTCCAT...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CAA 90 bp ACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGCAGTTGATGGTATCGTaGGAGTTGGACGTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: TATLQKEQFCAKRPESFLQLMVS*ELDVLL
Trigger: CAACAGCACGTCCAACTCCAACGATACCATCAACTG...CAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GTGCAGTCTCGATGTGACTGCACACAGAAGGGCGATGCAGATGCATCTGAATGGAAGTTTATTAACACTTaGATATCTGCTCCGGGGACA +
Preference number: 5 (lower is better)
Translates to: VQSRCDCTQKGDADASEWKFINT*ISAPGT
Trigger: TGTCCCCGGAGCAGATATCAAAGTGTTAATAAACTT...CCATTCAGATGCATCTGCATCGCCCTTCTGTGTGCAGTCACATCGAGACTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGGAATTTCTTCCGGTCTaGAGGGTTGGGGGCGTTGAA +
Preference number: 5 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQEFLPV*RVGGVE
Trigger: TTCAACGCCCCCAACCCTCAAGACCGGAAGAAATTC...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GCTGGAGATCTGGGTCTGGCCAACAGGGCAACTTCTGGACTTTTCAGAAAAAGTAACAAAGTGCTTGGTTaGCAGATTTGCTGGTACGGT +
Preference number: 5 (lower is better)
Translates to: AGDLGLANRATSGLFRKSNKVLG*QICWYG
Trigger: ACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTT...ACTTTTTCTGAAAAGTCCAGAAGTTGCCCTGTTGGCCAGACCCAGATCTCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CAA 90 bp GGACGTTATGGTGTTGGGGAGACGAGGATGAGAGCTGGTCACTTTCATGTTGGAAGGCTAAACTCTAGATaGCTGTATTTGCTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: GRYGVGETRMRAGHFHVGRLNSR*LYLLSL
Trigger: CAGAGAGAGCAAATACAGCAATCTAGAGTTTAGCCT...TCCAACATGAAAGTGACCAGCTCTCATCCTCGTCTCCCCAACACCATAACGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CAA 90 bp GATGTGTTTACAGTCACGCCAATACATTTTGCAAACGCACAACACGCAGAGCGCAAAAAGACCCGAGAATaGATGAGTCGGAGACACCAG +
Preference number: 5 (lower is better)
Translates to: DVFTVTPIHFANAQHAERKKTRE*MSRRHQ
Trigger: CTGGTGTCTCCGACTCATCAATTCTCGGGTCTTTTT...GCGCTCTGCGTGTTGTGCGTTTGCAAAATGTATTGGCGTGACTGTAAACACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CCAAAGAAATGCCACGCCAATGGGAGGACACAGGTGGGCGGGTTAAAGTCACATAACCATGGTTTTACATaGATAGAGTCTGTTGCCACT +
Preference number: 5 (lower is better)
Translates to: PKKCHANGRTQVGGLKSHNHGFT*IESVAT
Trigger: AGTGGCAACAGACTCTATCAATGTAAAACCATGGTT...ATGTGACTTTAACCCGCCCACCTGTGTCCTCCCATTGGCGTGGCATTTCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACTTCTCAGGCTTCTTGTaGAAGAGGTTCAGGCCGATG +
Preference number: 5 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHFSGFL*KRFRPM
Trigger: CATCGGCCTGAACCTCTTCAACAAGAAGCCTGAGAA...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp ACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGGACACATGGTCCTCATaGGTCTTTAGCTCTCGCTTA +
Preference number: 5 (lower is better)
Translates to: TATLQKEQFCAKRPESFLDTWSS*VFSSRL
Trigger: TAAGCGAGAGCTAAAGACCAATGAGGACCATGTGTC...CAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp TGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTGGTACGGTGATCTCAATGACCACCAGGAGGTCGTaGAACAGGAAGATTTCTCGC +
Preference number: 5 (lower is better)
Translates to: WRLTKCLVCRFAGTVISMTTRRS*NRKISR
Trigger: GCGAGAAATCTTCCTGTTCAACGACCTCCTGGTGGT...CATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGTCACCCTGCTCAGTGTaGCAATGCTGCCTTGACTAT +
Preference number: 5 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQSPCSV*QCCLDY
Trigger: ATAGTCAAGGCAGCATTGCAACACTGAGCAGGGTGA...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGGACACATGGTCCTCATaGGTCTTTAGCTCTCGCTTA +
Preference number: 5 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQDTWSS*VFSSRL
Trigger: TAAGCGAGAGCTAAAGACCAATGAGGACCATGTGTC...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp GCTGGAGATCTGGGTCTGGCCAACAGGGCAACTTCTGGACTTTTCAGAAAAAGTAGATTAACAAAGTGCTaGGTTTGCAGATTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: AGDLGLANRATSGLFRKSRLTKC*VCRFAG
Trigger: ACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCT...ACTTTTTCTGAAAAGTCCAGAAGTTGCCCTGTTGGCCAGACCCAGATCTCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS-3UTR CAA 90 bp TGGAGATTAACAAAGTGCTTGGTTTGCAGATTTGCTGGTACGGTGATCTCAATGGACACATGGTCCTCATaGGTCTTTAGCTCTCGCTTA +
Preference number: 5 (lower is better)
Translates to: WRLTKCLVCRFAGTVISMDTWSS*VFSSRL
Trigger: TAAGCGAGAGCTAAAGACCAATGAGGACCATGTGTC...CATTGAGATCACCGTACCAGCAAATCTGCAAACCAAGCACTTTGTTAATCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp AAACAACTCGGAGGCAAAAGATATTTTCCAAGAGGAGATGCATGCTGTGTGCAGTCTAGATTGCTGTATTaGCTCTCTCTGGAGATTAAC +
Preference number: 5 (lower is better)
Translates to: KQLGGKRYFPRGDACCVQSRLLY*LSLEIN
Trigger: GTTAATCTCCAGAGAGAGCAAATACAGCAATCTAGA...CTGCACACAGCATGCATCTCCTCTTGGAAAATATCTTTTGCCTCCGAGTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp CTGAATCTTTTCTGGAACAACCTAAAGGTTACAGTTAGACTCTCCTCCCAGCACAACCATGGTTTTACATaGATAGAGTCTGTTGCCACT +
Preference number: 5 (lower is better)
Translates to: LNLFWNNLKVTVRLSSQHNHGFT*IESVAT
Trigger: AGTGGCAACAGACTCTATCAATGTAAAACCATGGTT...GTGCTGGGAGGAGAGTCTAACTGTAACCTTTAGGTTGTTCCAGAAAAGATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000646269.1
CDS-3UTR CAA 90 bp ACTGCTACCCTTCAGAAAGAGCAATTCTGTGCCAAACGGCCTGAATCTTTTCTGATAATGCAGCAAGTTTaGGGGTTTGTTTTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: TATLQKEQFCAKRPESFLIMQQV*GFVLSV
Trigger: AACAGACAAAACAAACCCCAAAACTTGCTGCATTAT...CAGAAAAGATTCAGGCCGTTTGGCACAGAATTGCTCTTTCTGAAGGGTAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS GCA 72 bp TTCGGTGTCCCGGGCCCGCGCCGCATCCAGGGCCGGTaGCTCCTCAGTGTGCAGGCTGCGGCAGTTGAGGGC +
Preference number: 6 (lower is better)
Translates to: FGVPGPRRIQGR*LLSVQAAAVEG
Trigger: GCCCTCAACTGCCGCAGCCTGCACACTGAGGAGGCACCGGCCCTGGATGCGGCGCGGGCCCGGGACACCGAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS GCA 72 bp CCCGCAGCCGCTGCTCCTGCCGCTCCAGCGACGGCGTaGTCCGGCAGCTCGTGTCCGTGTCAGCCTTGTCCT +
Preference number: 6 (lower is better)
Translates to: PAAAAPAAPATA*SGSSCPCQPCP
Trigger: AGGACAAGGCTGACACGGACACGAGCTGCCGGAGCACGCCGTCGCTGGAGCGGCAGGAGCAGCGGCTGCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS GCA 72 bp ATGGTGAGCAGCGGCAGATGCTCCACCCGCAGCCGCTaGTCCTGCCGCTCCAGCGACGGCGTGCTCCGGCAG +
Preference number: 6 (lower is better)
Translates to: MVSSGRCSTRSR*SCRSSDGVLRQ
Trigger: CTGCCGGAGCACGCCGTCGCTGGAGCGGCAGGAGCAGCGGCTGCGGGTGGAGCATCTGCCGCTGCTCACCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CCA 72 bp CCTGCTTGCGCAGGATGGAGGTCGAGTGCTGCAGCTTaGGCCTCCGCGTGCGCTGCTGTTGCCCCGGCGGCC +
Preference number: 6 (lower is better)
Translates to: PACAGWRSSAAA*ASACAAVAPAA
Trigger: GGCCGCCGGGGCAACAGCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGACCTCCATCCTGCGCAAGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CAA 72 bp CGAGTGCTGCAGCTTGGGCCTCCGCGTGCGCTGCTGTaGCCCCGGCGGCCCCGAGTACAGCCCATAGGCTCC +
Preference number: 6 (lower is better)
Translates to: RVLQLGPPRALL*PRRPRVQPIGS
Trigger: GGAGCCTATGGGCTGTACTCGGGGCCGCCGGGGCAACAGCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CAA 72 bp GCCTGCTTGCGCAGGATGGAGGTCGAGTGCTGCAGCTaGGGCCTCCGCGTGCGCTGCTGTTGCCCCGGCGGC +
Preference number: 6 (lower is better)
Translates to: ACLRRMEVECCS*GLRVRCCCPGG
Trigger: GCCGCCGGGGCAACAGCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGACCTCCATCCTGCGCAAGCAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS GCA 72 bp GCCCGCGCCGCATCCAGGGCCGGTGCCTCCTCAGTGTaGAGGCTGCGGCAGTTGAGGGCATCGTCGATGGAC +
Preference number: 6 (lower is better)
Translates to: ARAASRAGASSV*RLRQLRASSMD
Trigger: GTCCATCGACGATGCCCTCAACTGCCGCAGCCTGCACACTGAGGAGGCACCGGCCCTGGATGCGGCGCGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CCA 72 bp TCCAGTTTGCGGTGGTCCATGCCGTGCAGGGCTGTCTaGGGTTCGGTGTCCCGGGCCCGCGCCGCATCCAGG +
Preference number: 6 (lower is better)
Translates to: SSLRWSMPCRAV*GSVSRARAASR
Trigger: CCTGGATGCGGCGCGGGCCCGGGACACCGAACCCCAGACAGCCCTGCACGGCATGGACCACCGCAAACTGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CAA 90 bp TCCTCCTCAGCCTGCTTGCGCAGGATGGAGGTCGAGTGCTGCAGCTaGGGCCTCCGCGTGCGCTGCTGTTGCCCCGGCGGCCCCGAGTAC +
Preference number: 6 (lower is better)
Translates to: SSSACLRRMEVECCS*GLRVRCCCPGGPEY
Trigger: GTACTCGGGGCCGCCGGGGCAACAGCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS GCA 72 bp GCCGTCATCTCGTCCAGTTTGCGGTGGTCCATGCCGTaGAGGGCTGTCTGGGGTTCGGTGTCCCGGGCCCGC +
Preference number: 6 (lower is better)
Translates to: AVISSSLRWSMP*RAVWGSVSRAR
Trigger: GCGGGCCCGGGACACCGAACCCCAGACAGCCCTGCACGGCATGGACCACCGCAAACTGGACGAGATGACGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CAA 90 bp CCGCTGTCAAGCTCTAGCTCCAGAAGGGACTGGGTCCTCTCCGAGTaGCAGTGCAGGCACCACATGGCGGCCGCAGTGGGAGCGGGCCGG +
Preference number: 6 (lower is better)
Translates to: PLSSSSSRRDWVLSE*QCRHHMAAAVGAGR
Trigger: CCGGCCCGCTCCCACTGCGGCCGCCATGTGGTGCCTGCACTGCAACTCGGAGAGGACCCAGTCCCTTCTGGAGCTAGAGCTTGACAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273221.8
CDS TCA 72 bp CCCCGGCGGCCCCGAGTACAGCCCATAGGCTCCCACTaGCGTGTGCTCGTAGTGATCCGGGCTCAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: PRRPRVQPIGSH*RVLVVIRAQAG
Trigger: TCCAGCCTGAGCCCGGATCACTACGAGCACACGTCAGTGGGAGCCTATGGGCTGTACTCGGGGCCGCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS GCA 72 bp AGCTCCAGAAGGGACTGGGTCCTCTCCGAGTTGCAGTaGAGGCACCACATGGCGGCCGCAGTGGGAGCGGGC +
Preference number: 6 (lower is better)
Translates to: SSRRDWVLSELQ*RHHMAAAVGAG
Trigger: GCCCGCTCCCACTGCGGCCGCCATGTGGTGCCTGCACTGCAACTCGGAGAGGACCCAGTCCCTTCTGGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273221.8
CDS GCA 72 bp TCCTCAGCCTGCTTGCGCAGGATGGAGGTCGAGTGCTaGAGCTTGGGCCTCCGCGTGCGCTGCTGTTGCCCC +
Preference number: 6 (lower is better)
Translates to: SSACLRRMEVEC*SLGLRVRCCCP
Trigger: GGGGCAACAGCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGACCTCCATCCTGCGCAAGCAGGCTGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CCA 72 bp CCACTGACGTGTGCTCGTAGTGATCCGGGCTCAGGCTaGAACCGGGCACCAAGGGGCCCTGGGGGTAGGCTG +
Preference number: 6 (lower is better)
Translates to: PLTCARSDPGSG*NRAPRGPGGRL
Trigger: CAGCCTACCCCCAGGGCCCCTTGGTGCCCGGTTCCAGCCTGAGCCCGGATCACTACGAGCACACGTCAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS GCA 72 bp TCCTCCTCAGCCTGCTTGCGCAGGATGGAGGTCGAGTaGTGCAGCTTGGGCCTCCGCGTGCGCTGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: SSSACLRRMEVE*CSLGLRVRCCC
Trigger: GCAACAGCAGCGCACGCGGAGGCCCAAGCTGCAGCACTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CCA 72 bp ACACGGCACTGCCATACCCCTTCATGCCTGGCTCGGTaGAGGAGCGAGTGGCCAAGGGGCCCACCACCACTG +
Preference number: 6 (lower is better)
Translates to: TRHCHTPSCLAR*RSEWPRGPPPL
Trigger: CAGTGGTGGTGGGCCCCTTGGCCACTCGCTCCTCCACCGAGCCAGGCATGAAGGGGTATGGCAGTGCCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS CCA 72 bp AAGGCTCCACACGGCACTGCCATACCCCTTCATGCCTaGCTCGGTGGAGGAGCGAGTGGCCAAGGGGCCCAC +
Preference number: 6 (lower is better)
Translates to: KAPHGTAIPLHA*LGGGASGQGAH
Trigger: GTGGGCCCCTTGGCCACTCGCTCCTCCACCGAGCCAGGCATGAAGGGGTATGGCAGTGCCGTGTGGAGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS CAA 90 bp TCGGAGAGTGAGCGTGAGCGCTTGATGGCCTCCTCCTCAGCCTGCTaGCGCAGGATGGAGGTCGAGTGCTGCAGCTTGGGCCTCCGCGTG +
Preference number: 6 (lower is better)
Translates to: SESERERLMASSSAC*RRMEVECCSLGLRV
Trigger: CACGCGGAGGCCCAAGCTGCAGCACTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGGAGGCCATCAAGCGCTCACGCTCACTCTCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CAA 90 bp AGCTCGGTGATGGCGTCCGCAAAGTCACTGGAGGGGGCCGGAGACTaGAGGGTGGTGGGCTCGCTGAGGTCACCACACTCAGGGGACACC +
Preference number: 6 (lower is better)
Translates to: SSVMASAKSLEGAGD*RVVGSLRSPHSGDT
Trigger: GGTGTCCCCTGAGTGTGGTGACCTCAGCGAGCCCACCACCCTCAAGTCTCCGGCCCCCTCCAGTGACTTTGCGGACGCCATCACCGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CAA 90 bp GCCAAGCGGCCCTCACACACTAGACCCTGTGGCTTCTGCACAACCTaGCGCCTGCCTCCTGCCAGGAGACAGCAGTGGCTGCAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: AKRPSHTRPCGFCTT*RLPPARRQQWLQAR
Trigger: CCTGGCCTGCAGCCACTGCTGTCTCCTGGCAGGAGGCAGGCGCAAGGTTGTGCAGAAGCCACAGGGTCTAGTGTGTGAGGGCCGCTTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS GCA 72 bp GCTCTAGCTCCAGAAGGGACTGGGTCCTCTCCGAGTTaGAGTGCAGGCACCACATGGCGGCCGCAGTGGGAG +
Preference number: 6 (lower is better)
Translates to: ALAPEGTGSSPS*SAGTTWRPQWE
Trigger: CTCCCACTGCGGCCGCCATGTGGTGCCTGCACTGCAACTCGGAGAGGACCCAGTCCCTTCTGGAGCTAGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273221.8
CDS GCA 72 bp ACCCTTCCACATTGCTCTCTAGCGATCCCGCACTGCTaGGACGCCCTCGCTTCCCGGCTTCCGAGAGGTCCC +
Preference number: 6 (lower is better)
Translates to: TLPHCSLAIPHC*DALASRLPRGP
Trigger: GGGACCTCTCGGAAGCCGGGAAGCGAGGGCGTCGCAGCAGTGCGGGATCGCTAGAGAGCAATGTGGAAGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000648114.1
CDS CCA 72 bp TCTTGTTCATCTGGTACTGGCGAAACGCCGTCTGGATaGTGCGGGCCGCATGGCGGGTTACCAGGCGCCCCC +
Preference number: 6 (lower is better)
Translates to: SCSSGTGETPSG*CGPHGGLPGAP
Trigger: GGGGGCGCCTGGTAACCCGCCATGCGGCCCGCACCATCCAGACGGCGTTTCGCCAGTACCAGATGAACAAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CAA 72 bp GAGCGTGAGCGCTTGATGGCCTCCTCCTCAGCCTGCTaGCGCAGGATGGAGGTCGAGTGCTGCAGCTTGGGC +
Preference number: 6 (lower is better)
Translates to: ERERLMASSSAC*RRMEVECCSLG
Trigger: GCCCAAGCTGCAGCACTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGGAGGCCATCAAGCGCTCACGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS TCA 72 bp AGCTGTTGCGGGCCTCCTTGTGGTAGGTCTGCTTGCTaGGCGTCTGCTCCCGCAGGCTGTCACGGGACGATG +
Preference number: 6 (lower is better)
Translates to: SCCGPPCGRSAC*ASAPAGCHGTM
Trigger: CATCGTCCCGTGACAGCCTGCGGGAGCAGACGCTCAGCAAGCAGACCTACCACAAGGAGGCCCGCAACAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS GCA 72 bp TGGACCCTTCCACATTGCTCTCTAGCGATCCCGCACTaGTGCGACGCCCTCGCTTCCCGGCTTCCGAGAGGT +
Preference number: 6 (lower is better)
Translates to: WTLPHCSLAIPH*CDALASRLPRG
Trigger: ACCTCTCGGAAGCCGGGAAGCGAGGGCGTCGCAGCAGTGCGGGATCGCTAGAGAGCAATGTGGAAGGGTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000648114.1
CDS GCA 72 bp GCCAAGCGGCCCTCACACACTAGACCCTGTGGCTTCTaGACAACCTTGCGCCTGCCTCCTGCCAGGAGACAG +
Preference number: 6 (lower is better)
Translates to: AKRPSHTRPCGF*TTLRLPPARRQ
Trigger: CTGTCTCCTGGCAGGAGGCAGGCGCAAGGTTGTGCAGAAGCCACAGGGTCTAGTGTGTGAGGGCCGCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS CCA 72 bp AGGTCACCACACTCAGGGGACACCAGGGCTCCCAGCTaGGAGCCGTCGTTAGTCACTGAGACCTGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: RSPHSGDTRAPS*EPSLVTETCFP
Trigger: GGGGAAGCAGGTCTCAGTGACTAACGACGGCTCCCAGCTGGGAGCCCTGGTGTCCCCTGAGTGTGGTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CCA 72 bp TGTGCCCTGGTCCTGTCTAGCTGCTCCAGACCCTCCTaGCCAAGCGGCCCTCACACACTAGACCCTGTGGCT +
Preference number: 6 (lower is better)
Translates to: CALVLSSCSRPS*PSGPHTLDPVA
Trigger: AGCCACAGGGTCTAGTGTGTGAGGGCCGCTTGGCCAGGAGGGTCTGGAGCAGCTAGACAGGACCAGGGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646269.1
CDS CAA 72 bp AGCTCTAGCTCCAGAAGGGACTGGGTCCTCTCCGAGTaGCAGTGCAGGCACCACATGGCGGCCGCAGTGGGA +
Preference number: 6 (lower is better)
Translates to: SSSSRRDWVLSE*QCRHHMAAAVG
Trigger: TCCCACTGCGGCCGCCATGTGGTGCCTGCACTGCAACTCGGAGAGGACCCAGTCCCTTCTGGAGCTAGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273221.8
CDS CAA 72 bp ATGGCGTCCGCAAAGTCACTGGAGGGGGCCGGAGACTaGAGGGTGGTGGGCTCGCTGAGGTCACCACACTCA +
Preference number: 6 (lower is better)
Translates to: MASAKSLEGAGD*RVVGSLRSPHS
Trigger: TGAGTGTGGTGACCTCAGCGAGCCCACCACCCTCAAGTCTCCGGCCCCCTCCAGTGACTTTGCGGACGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CAA 72 bp CAGGCCCGGCTCAGTGTTCCGTTGCCCGACTCCTTTTaGAGGCTAGAGCACTGGGACATGCTGGGCCGCACG +
Preference number: 6 (lower is better)
Translates to: QARLSVPLPDSF*RLEHWDMLGRT
Trigger: CGTGCGGCCCAGCATGTCCCAGTGCTCTAGCCTCAAAAAGGAGTCGGGCAACGGAACACTGAGCCGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000648114.1
ENST00000648386.1
CDS CAA 90 bp TCGTCCAGGCAGGCCCGGCTCAGTGTTCCGTTGCCCGACTCCTTTTaGAGGCTAGAGCACTGGGACATGCTGGGCCGCACGACGCCTTTC +
Preference number: 6 (lower is better)
Translates to: SSRQARLSVPLPDSF*RLEHWDMLGRTTPF
Trigger: GAAAGGCGTCGTGCGGCCCAGCATGTCCCAGTGCTCTAGCCTCAAAAAGGAGTCGGGCAACGGAACACTGAGCCGGGCCTGCCTGGACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000648114.1
ENST00000648386.1
CDS TCA 72 bp CACCAGGGCTCCCAGCTGGGAGCCGTCGTTAGTCACTaGGACCTGCTTCCCCTCGAAGTAGGAGCTGTGCAC +
Preference number: 6 (lower is better)
Translates to: HQGSQLGAVVSH*DLLPLEVGAVH
Trigger: GTGCACAGCTCCTACTTCGAGGGGAAGCAGGTCTCAGTGACTAACGACGGCTCCCAGCTGGGAGCCCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS TCA 72 bp GCCAAGGCTGCGCTCGTAAGCACTCTGCCTCTTGAGTaGCCCCCGCTCCGAGCGGTCACTAAGGTCCACAGA +
Preference number: 6 (lower is better)
Translates to: AKAALVSTLPLE*PPLRAVTKVHR
Trigger: TCTGTGGACCTTAGTGACCGCTCGGAGCGGGGGTCACTCAAGAGGCAGAGTGCTTACGAGCGCAGCCTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS GCA 72 bp AGTGAGCGTGAGCGCTTGATGGCCTCCTCCTCAGCCTaGTTGCGCAGGATGGAGGTCGAGTGCTGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: SERERLMASSSA*LRRMEVECCSL
Trigger: CAAGCTGCAGCACTCGACCTCCATCCTGCGCAAGCAGGCTGAGGAGGAGGCCATCAAGCGCTCACGCTCACT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000273221.8
ENST00000473088.1
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS GCA 72 bp GAAATTCCACATTGCTCTCTAGCGATCCCGCACTGCTaGGACGCCCTCGCTTCCCGGCTTCCGAGAGGTCCC +
Preference number: 6 (lower is better)
Translates to: EIPHCSLAIPHC*DALASRLPRGP
Trigger: GGGACCTCTCGGAAGCCGGGAAGCGAGGGCGTCGCAGCAGTGCGGGATCGCTAGAGAGCAATGTGGAATTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273221.8
ENST00000646269.1
CDS CCA 72 bp TCACTGTACGAGGCCGTCATCTCGTCCAGTTTGCGGTaGTCCATGCCGTGCAGGGCTGTCTGGGGTTCGGTG +
Preference number: 6 (lower is better)
Translates to: SLYEAVISSSLR*SMPCRAVWGSV
Trigger: CACCGAACCCCAGACAGCCCTGCACGGCATGGACCACCGCAAACTGGACGAGATGACGGCCTCGTACAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CCA 72 bp CAGGGAACCCAATGCTGCCACTGGAGTGCGCACAGCTaGGGCCTGCAGGTTTTGTCTCTCCGGCTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: QGTQCCHWSAHS*GLQVLSLRLLL
Trigger: AAGGAGGAGCCGGAGAGACAAAACCTGCAGGCCCCAGCTGTGCGCACTCCAGTGGCAGCATTGGGTTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474467.1
CDS GCA 72 bp GAGCACTGGGACATGCTGGGCCGCACGACGCCTTTCTaGTTCTCGAGCTCCGACTCTATCCTGTGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: EHWDMLGRTTPF*FSSSDSILCFS
Trigger: GGAGAAGCACAGGATAGAGTCGGAGCTCGAGAAGCAGAAAGGCGTCGTGCGGCCCAGCATGTCCCAGTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000648114.1
ENST00000648386.1
CDS GCA 72 bp GCTGAAATTCCACATTGCTCTCTAGCGATCCCGCACTaGTGCGACGCCCTCGCTTCCCGGCTTCCGAGAGGT +
Preference number: 6 (lower is better)
Translates to: AEIPHCSLAIPH*CDALASRLPRG
Trigger: ACCTCTCGGAAGCCGGGAAGCGAGGGCGTCGCAGCAGTGCGGGATCGCTAGAGAGCAATGTGGAATTTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273221.8
ENST00000646269.1
CDS GCA 72 bp CTCCCTGCCTCTGCCTCAGGCTGCATTCTAACAAGCTaGTCCCCAGCAATGCCAGGGAGGGGAAAGAGGGTC +
Preference number: 6 (lower is better)
Translates to: LPASASGCILTS*SPAMPGRGKRV
Trigger: GACCCTCTTTCCCCTCCCTGGCATTGCTGGGGAGCAGCTTGTTAGAATGCAGCCTGAGGCAGAGGCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474467.1
CDS CCA 72 bp TCGACGCCGCTGTCAAGCTCTAGCTCCAGAAGGGACTaGGTCCTCTCCGAGTTGCAGTGCAGGCACCACATG +
Preference number: 6 (lower is better)
Translates to: STPLSSSSSRRD*VLSELQCRHHM
Trigger: CATGTGGTGCCTGCACTGCAACTCGGAGAGGACCCAGTCCCTTCTGGAGCTAGAGCTTGACAGCGGCGTCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273221.8
CDS CCA 72 bp TCCACGGTGGCTGTACAGGGAACCCAATGCTGCCACTaGAGTGCGCACAGCTGGGGCCTGCAGGTTTTGTCT +
Preference number: 6 (lower is better)
Translates to: STVAVQGTQCCH*SAHSWGLQVLS
Trigger: AGACAAAACCTGCAGGCCCCAGCTGTGCGCACTCCAGTGGCAGCATTGGGTTCCCTGTACAGCCACCGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474467.1
CDS CAA 72 bp GTGACATCACTGTACGAGGCCGTCATCTCGTCCAGTTaGCGGTGGTCCATGCCGTGCAGGGCTGTCTGGGGT +
Preference number: 6 (lower is better)
Translates to: VTSLYEAVISSS*RWSMPCRAVWG
Trigger: ACCCCAGACAGCCCTGCACGGCATGGACCACCGCAAACTGGACGAGATGACGGCCTCGTACAGTGATGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CAA 90 bp ATGTACAGGGTGACATCACTGTACGAGGCCGTCATCTCGTCCAGTTaGCGGTGGTCCATGCCGTGCAGGGCTGTCTGGGGTTCGGTGTCC +
Preference number: 6 (lower is better)
Translates to: MYRVTSLYEAVISSS*RWSMPCRAVWGSVS
Trigger: GGACACCGAACCCCAGACAGCCCTGCACGGCATGGACCACCGCAAACTGGACGAGATGACGGCCTCGTACAGTGATGTCACCCTGTACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CCA 72 bp GTTCCGTTGCCCGACTCCTTTTTGAGGCTAGAGCACTaGGACATGCTGGGCCGCACGACGCCTTTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: VPLPDSFLRLEH*DMLGRTTPFCF
Trigger: GAAGCAGAAAGGCGTCGTGCGGCCCAGCATGTCCCAGTGCTCTAGCCTCAAAAAGGAGTCGGGCAACGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000648114.1
ENST00000648386.1
CDS CCA 72 bp CCTCATCCGCTGTCAAGCTCTAGCTCCAGAAGGGACTaGGTCCTCTCCGAGTTGCAGTGCAGGCACCACATG +
Preference number: 6 (lower is better)
Translates to: PHPLSSSSSRRD*VLSELQCRHHM
Trigger: CATGTGGTGCCTGCACTGCAACTCGGAGAGGACCCAGTCCCTTCTGGAGCTAGAGCTTGACAGCGGATGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474467.1
CDS TCA 72 bp GAGGGGGCGACAGCTCCTCCTCATCGATGTACAGGGTaGCATCACTGTACGAGGCCGTCATCTCGTCCAGTT +
Preference number: 6 (lower is better)
Translates to: EGATAPPHRCTG*HHCTRPSSRPV
Trigger: AACTGGACGAGATGACGGCCTCGTACAGTGATGTCACCCTGTACATCGATGAGGAGGAGCTGTCGCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS TCA 72 bp GGACACTCTCGTGTTGATGTAGCTCTCCGGCGCATGTaGGGACTGCTAATGATGGACCCCGGCTTCCGAGAG +
Preference number: 6 (lower is better)
Translates to: GHSRVDVALRRM*GLLMMDPGFRE
Trigger: CTCTCGGAAGCCGGGGTCCATCATTAGCAGTCCTCACATGCGCCGGAGAGCTACATCAACACGAGAGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618604.4
CDS GCA 72 bp GCATCCTCATGTTGGACAGCACAATCCGGCGTGACATaGGGTTCTCTGACATGGAGCTGCGCAAGCGCTCGA +
Preference number: 6 (lower is better)
Translates to: ASSCWTAQSGVT*GSLTWSCASAR
Trigger: TCGAGCGCTTGCGCAGCTCCATGTCAGAGAACCGCATGTCACGCCGGATTGTGCTGTCCAACATGAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS CCA 72 bp CTGCTGATGGTAGTGCACCTCTGTAGCCATCCACGGTaGCTGTACAGGGAACCCAATGCTGCCACTGGAGTG +
Preference number: 6 (lower is better)
Translates to: LLMVVHLCSHPR*LYREPNAATGV
Trigger: CACTCCAGTGGCAGCATTGGGTTCCCTGTACAGCCACCGTGGATGGCTACAGAGGTGCACTACCATCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474467.1
CDS TCA 72 bp CGGGATGCAGGGATCCGATCGGCTTTTTCCCCACAATaGGCTTCTCCACCTTCTGCACCTGGGACACATGGT +
Preference number: 6 (lower is better)
Translates to: RDAGIRSAFSPQ*ASPPSAPGTHG
Trigger: ACCATGTGTCCCAGGTGCAGAAGGTGGAGAAGCTCATTGTGGGGAAAAAGCCGATCGGATCCCTGCATCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS GCA 72 bp TGCTGGGGGCCTCGCCCTCGACGAAATAGCGTCTTCTaGAAGCCATCCTGTGTGAATCCGTTCTTCCCTGTT +
Preference number: 6 (lower is better)
Translates to: CWGPRPRRNSVF*KPSCVNPFFPV
Trigger: AACAGGGAAGAACGGATTCACACAGGATGGCTTGCAGAAGACGCTATTTCGTCGAGGGCGAGGCCCCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613206.2
CDS CCA 72 bp GGCGTGTCGGGCACAAAGCCACGCTCGATGAGGTACTaGACTCCCTTCTCAGGCTTCTTGTTGAAGAGGTTC +
Preference number: 6 (lower is better)
Translates to: GVSGTKPRSMRY*TPFSGFLLKRF
Trigger: GAACCTCTTCAACAAGAAGCCTGAGAAGGGAGTCCAGTACCTCATCGAGCGTGGCTTTGTGCCCGACACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS TCA 72 bp GTTGGACGTGCTGTTGATGCTGTCATTGTCACCGTCTaGGTAGTCCGACTCAGACTTGCTCTGCCGGTTGGC +
Preference number: 6 (lower is better)
Translates to: VGRAVDAVIVTV*VVRLRLALPVG
Trigger: GCCAACCGGCAGAGCAAGTCTGAGTCGGACTACTCAGACGGTGACAATGACAGCATCAACAGCACGTCCAAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000647458.1
ENST00000648114.1
ENST00000648386.1
CDS GCA 72 bp TGGGGTAGTACTGGTTCTCGAAGAGCAGGACCTGCATaGCGTACAAGGAGAAGGACTGTCGGAAGCTGTACG +
Preference number: 6 (lower is better)
Translates to: WGSTGSRRAGPA*RTRRRTVGSCT
Trigger: CGTACAGCTTCCGACAGTCCTTCTCCTTGTACGGCATGCAGGTCCTGCTCTTCGAGAACCAGTACTACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000648114.1
ENST00000648386.1
CDS CAA 90 bp ACAGGAAGATTTCTCGCTGGTGTAGTCCGAGTTTCTGGGGCTTGTTaGGGTCTGGAACCTCAAAGAGCCGGCAGTAGCAGACCAACCGAC +
Preference number: 6 (lower is better)
Translates to: TGRFLAGVVRVSGAC*GLEPQRAGSSRPTD
Trigger: GTCGGTTGGTCTGCTACTGCCGGCTCTTTGAGGTTCCAGACCCAAACAAGCCCCAGAAACTCGGACTACACCAGCGAGAAATCTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000648114.1
ENST00000648386.1
CDS TCA 72 bp GGACACTCTCGTGTTGATGTAGCTCTCCGGCGCATGTaGGGACTGCTAATGATGGACCCTTCCACATTGCTC +
Preference number: 6 (lower is better)
Translates to: GHSRVDVALRRM*GLLMMDPSTLL
Trigger: GAGCAATGTGGAAGGGTCCATCATTAGCAGTCCTCACATGCGCCGGAGAGCTACATCAACACGAGAGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613206.2
ENST00000648114.1
CDS TCA 72 bp CATAGTCTGGTGTGGGCGAGATGGACACTCTCGTGTTaGTGTAGCTCTCCGGCGCATGTGAGGACTGCTAAT +
Preference number: 6 (lower is better)
Translates to: HSLVWARWTLSC*CSSPAHVRTAN
Trigger: ATTAGCAGTCCTCACATGCGCCGGAGAGCTACATCAACACGAGAGTGTCCATCTCGCCCACACCAGACTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613206.2
ENST00000618604.4
ENST00000648114.1
CDS CAA 72 bp TTTCTCGCTGGTGTAGTCCGAGTTTCTGGGGCTTGTTaGGGTCTGGAACCTCAAAGAGCCGGCAGTAGCAGA +
Preference number: 6 (lower is better)
Translates to: FLAGVVRVSGAC*GLEPQRAGSSR
Trigger: TCTGCTACTGCCGGCTCTTTGAGGTTCCAGACCCAAACAAGCCCCAGAAACTCGGACTACACCAGCGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000648114.1
ENST00000648386.1
CDS CAA 72 bp CAGGCAAAAGGCCTTGAACTTGAGCATTTTCACCTTTaGGTCTCCAGCTGGACCACGGTAACGTCTCCGCGG +
Preference number: 6 (lower is better)
Translates to: QAKGLELEHFHL*VSSWTTVTSPR
Trigger: CCGCGGAGACGTTACCGTGGTCCAGCTGGAGACCAAAAGGTGAAAATGCTCAAGTTCAAGGCCTTTTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647458.1
CDS CAA 90 bp CCAGTAATCCAGGCAAAAGGCCTTGAACTTGAGCATTTTCACCTTTaGGTCTCCAGCTGGACCACGGTAACGTCTCCGCGGAGACACGGA +
Preference number: 6 (lower is better)
Translates to: PVIQAKGLELEHFHL*VSSWTTVTSPRRHG
Trigger: TCCGTGTCTCCGCGGAGACGTTACCGTGGTCCAGCTGGAGACCAAAAGGTGAAAATGCTCAAGTTCAAGGCCTTTTGCCTGGATTACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647458.1
CDS CCA 72 bp AACAGGAAGATTTCTCGCTGGTGTAGTCCGAGTTTCTaGGGCTTGTTTGGGTCTGGAACCTCAAAGAGCCGG +
Preference number: 6 (lower is better)
Translates to: NRKISRWCSPSF*GLFGSGTSKSR
Trigger: CCGGCTCTTTGAGGTTCCAGACCCAAACAAGCCCCAGAAACTCGGACTACACCAGCGAGAAATCTTCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000648114.1
ENST00000648386.1
CDS TCA 72 bp GACTCCCGCAGGTCATCGGTGAATTTCTTCCGGTCTTaGGGGTTGGGGGCGTTGAAGTTTATTAACACTTTG +
Preference number: 6 (lower is better)
Translates to: DSRRSSVNFFRS*GLGALKFINTL
Trigger: CAAAGTGTTAATAAACTTCAACGCCCCCAACCCTCAAGACCGGAAGAAATTCACCGATGACCTGCGGGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000273221.8
ENST00000613206.2
ENST00000618604.4
ENST00000646269.1
ENST00000648114.1
ENST00000648386.1