RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INPP5D (Homo sapiens)

Ensembl gene IDs: ENSG00000168918

Ensembl transcript IDs: ENST00000359570.9, ENST00000415617.5, ENST00000417661.1, ENST00000445964.6, ENST00000451407.4, ENST00000465281.1, ENST00000467393.5, ENST00000472517.1, ENST00000474278.2, ENST00000480983.1, ENST00000491070.1, ENST00000493078.1, ENST00000493632.5, ENST00000496402.2, ENST00000627169.2, ENST00000627243.1, ENST00000627349.1, ENST00000627806.2, ENST00000628466.1, ENST00000628814.2, ENST00000628842.1, ENST00000629540.1, ENST00000629761.2, ENST00000629792.1, ENST00000630338.2, ENST00000630466.1, ENST00000630854.3, ENST00000631055.1

Found 1523 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTGCACTATTTCAAGAGCCTGGAACCAAGAGGCCCACCCTCCCTaGCAGCCAGGCTGGAGAGCACGGCTTTCGGGAGCAACAGCAAAG +
Preference number: 1 (lower is better)
Translates to: GCTISRAWNQEAHPP*QPGWRARLSGATAK
Trigger: CTTTGCTGTTGCTCCCGAAAGCCGTGCTCTCCAGCCTGGCTGCCAGGGAGGGTGGGCCTCTTGGTTCCAGGCTCTTGAAATAGTGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR CCA 90 bp GGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTaGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTT +
Preference number: 1 (lower is better)
Translates to: GALNEALGSQVPRAS*GPRLFVARLVCVFL
Trigger: AAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR CCA 90 bp GGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTaGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTG +
Preference number: 1 (lower is better)
Translates to: GAAVPFFRMAPSTRH*GPKYQERAGDPDCL
Trigger: CAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR CCA 90 bp TCAAGAGCCTGGAACCAAGAGGCCCACCCTCCCTGGCAGCCAGGCTaGAGAGCACGGCTTTCGGGAGCAACAGCAAAGACTCTTCTACCA +
Preference number: 1 (lower is better)
Translates to: SRAWNQEAHPPWQPG*RARLSGATAKTLLP
Trigger: TGGTAGAAGAGTCTTTGCTGTTGCTCCCGAAAGCCGTGCTCTCCAGCCTGGCTGCCAGGGAGGGTGGGCCTCTTGGTTCCAGGCTCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR GCA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTaGGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAGG +
Preference number: 1 (lower is better)
Translates to: PRASWGPRLFVARLV*VFLPASALGAKSHR
Trigger: CCTGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR CCA 90 bp TATATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATaGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAG +
Preference number: 1 (lower is better)
Translates to: YISTLKSALQFLSSE*RPQRGTGVPSTKSE
Trigger: CTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR CCA 90 bp AAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTaGAACCAAGAGGCCCACCCTCCCTGGCAGCCAGGCTGGAGAGCA +
Preference number: 1 (lower is better)
Translates to: KATEIGRKGCTISRA*NQEAHPPWQPGWRA
Trigger: TGCTCTCCAGCCTGGCTGCCAGGGAGGGTGGGCCTCTTGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR GCA 90 bp TTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGGTAGATCCCTaGTCTCAGCCTAGCCATGCCGGAACCCGCGGGACTTTAGCTAAA +
Preference number: 1 (lower is better)
Translates to: FLLLPTKELRSQVDP*SQPSHAGTRGTLAK
Trigger: TTTAGCTAAAGTCCCGCGGGTTCCGGCATGGCTAGGCTGAGAGCAGGGATCTACCTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR CCA 90 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTaGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTC +
Preference number: 1 (lower is better)
Translates to: KYQERAGDPDCLLPV*CAFFFQPQHLVLSL
Trigger: GAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR GCA 90 bp CATGGAGCAGTTCCCAGGACCATCACTCGCATGTGTGCACATGCATaGGTTCACACATGCACGCACATATGCATGCGTGCACACACACAT +
Preference number: 1 (lower is better)
Translates to: HGAVPRTITRMCAHA*VHTCTHICMRAHTH
Trigger: ATGTGTGTGTGCACGCATGCATATGTGCGTGCATGTGTGAACGCATGCATGTGCACACATGCGAGTGATGGTCCTGGGAACTGCTCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
3UTR CCA 90 bp CAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTaGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTG +
Preference number: 1 (lower is better)
Translates to: QALASLAQAEARSLH*RIGADFLLLPTKEL
Trigger: CAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR GCA 90 bp CCCAGGACCATCACTCGCATGTGTGCACATGCATGCGTTCACACATaGACGCACATATGCATGCGTGCACACACACATGCACACACATAT +
Preference number: 1 (lower is better)
Translates to: PRTITRMCAHACVHT*THICMRAHTHAHTY
Trigger: ATATGTGTGTGCATGTGTGTGTGCACGCATGCATATGTGCGTGCATGTGTGAACGCATGCATGTGCACACATGCGAGTGATGGTCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
3UTR GCA 90 bp ACTAAGTTTATCCACAGCCCCGCCTTTCTTCCTTTTAACAACTGCTaGAGAGGCAATGCAGGGTCAGGGATGTGTGGGACAGGCAGACCT +
Preference number: 1 (lower is better)
Translates to: TKFIHSPAFLPFNNC*RGNAGSGMCGTGRP
Trigger: AGGTCTGCCTGTCCCACACATCCCTGACCCTGCATTGCCTCTGCAGCAGTTGTTAAAAGGAAGAAAGGCGGGGCTGTGGATAAACTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
3UTR TCA 90 bp GTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAGGCAGTaGACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACA +
Preference number: 1 (lower is better)
Translates to: VFLPASALGAKSHRQ*TLWATQKLGPFLKT
Trigger: TGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
3UTR CCA 90 bp GAAAGGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTaGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGC +
Preference number: 1 (lower is better)
Translates to: ERHNLLVTQTSIMGM*GAFPSAFTHTTGFS
Trigger: GCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp GCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACCTTGCATAGGAAGCTaGGCAGGAGGAGCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: ALNEALGSQVPRASWGPRPCIGS*AGGASR
Trigger: CCTGCTGGCTCCTCCTGCCCAGCTTCCTATGCAAGG...TCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR CAA 90 bp ATGGCTGCCCACCTCGAGGAGGGCACAGGGAACCTGGCACAGGCCTaGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGA +
Preference number: 2 (lower is better)
Translates to: MAAHLEEGTGNLAQA*ASLAQAEARSLHWR
Trigger: TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGCCAGGTTCCCTGTGCCCTCCTCGAGGTGGGCAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCCCTTGCATAGGAAGCTaGGCAGGAGGAGCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLPCIGS*AGGASR
Trigger: CCTGCTGGCTCCTCCTGCCCAGCTTCCTATGCAAGG...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCCTTGCATAGGAAGCTaGGCAGGAGGAGCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQPCIGS*AGGASR
Trigger: CCTGCTGGCTCCTCCTGCCCAGCTTCCTATGCAAGG...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR TCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAAAGTCTCACAGGCAGTaGACTCTGTGGGCCACACAG +
Preference number: 2 (lower is better)
Translates to: AQALASLAQAEARSLHWRKSHRQ*TLWATQ
Trigger: CTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTT...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR TCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGAAGTCTCACAGGCAGTaGACTCTGTGGGCCACACAG +
Preference number: 2 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQKSHRQ*TLWATQ
Trigger: CTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTT...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTTTCACGCCGTTCCTCTaGGCTCCCGACTCAGTGGCA +
Preference number: 2 (lower is better)
Translates to: PRLFVARLVCVFLPASALFTPFL*APDSVA
Trigger: TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAA...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGTTCACGCCGTTCCTCTaGGCTCCCGACTCAGTGGCA +
Preference number: 2 (lower is better)
Translates to: LAQAEARSLHWRIGADFLFTPFL*APDSVA
Trigger: TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAA...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACACCTTGCATAGGAAGCTaGGCAGGAGGAGCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTPCIGS*AGGASR
Trigger: CCTGCTGGCTCCTCCTGCCCAGCTTCCTATGCAAGG...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGATTCACGCCGTTCCTCTaGGCTCCCGACTCAGTGGCA +
Preference number: 2 (lower is better)
Translates to: VGHTEARPFPENTKPCIGFTPFL*APDSVA
Trigger: TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAA...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTCACGCCGTTCCTCTaGGCTCCCGACTCAGTGGCA +
Preference number: 2 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGFTPFL*APDSVA
Trigger: TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAA...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGATTCCTTTCTTCAGAATaGCGCCCTCAACGAGGCACT +
Preference number: 2 (lower is better)
Translates to: AQALASLAQAEARSLHWRFLSSE*RPQRGT
Trigger: AGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAA...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR TCA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGAAGTCTCACAGGCAGTaGACTCTGTGGGCCACACAG +
Preference number: 2 (lower is better)
Translates to: LAQAEARSLHWRIGADFLKSHRQ*TLWATQ
Trigger: CTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTT...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR GCA 90 bp GGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCAGCCAGGTAGATCCCTaGTCTCAGCCTAGCCATGCC +
Preference number: 2 (lower is better)
Translates to: GMWGAFPSAFTHTTGFSSSQVDP*SQPSHA
Trigger: GGCATGGCTAGGCTGAGAGCAGGGATCTACCTGGCT...GGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR GCA 90 bp GCAATGCAGGGTCAGGGATGTGTGGGACAGGCAGACCTGGGTTCAAATCCTGACCATCACTCGCATGTGTaGACATGCATGCGTTCACAC +
Preference number: 2 (lower is better)
Translates to: AMQGQGCVGQADLGSNPDHHSHV*TCMRSH
Trigger: GTGTGAACGCATGCATGTGCACACATGCGAGTGATG...GTCAGGATTTGAACCCAGGTCTGCCTGTCCCACACATCCCTGACCCTGCATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
3UTR-3UTR GCA 90 bp TTGGGAGGCCCAGGCAGGCAGATCACCTGGCGAAACTCAGTTGCAAAACAAATTCTGCTGCAGAGGCAATaGAGGGTCAGGGATGTGTGG +
Preference number: 2 (lower is better)
Translates to: LGGPGRQITWRNSVAKQILLQRQ*RVRDVW
Trigger: CCACACATCCCTGACCCTGCATTGCCTCTGCAGCAG...AATTTGTTTTGCAACTGAGTTTCGCCAGGTGATCTGCCTGCCTGGGCCTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
3UTR-3UTR CCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCCGGGAGAGGGTCCAGTaGCTTCACGCCGTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPRERVQ*LHAVPL
Trigger: CAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCG...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGATGTTTGTTGCCCGTCTaGTGTGCGTTTTTCTTCCAG +
Preference number: 2 (lower is better)
Translates to: AQALASLAQAEARSLHWRCLLPV*CAFFFQ
Trigger: CTGGAAGAAAAACGCACACCAGACGGGCAACAAACA...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR GCA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTGAAAACACAAAGCCTTaGATAGGAAGCTGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFENTKP*IGSWAG
Trigger: TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTC...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR GCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCGAAAACACAAAGCCTTaGATAGGAAGCTGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLENTKP*IGSWAG
Trigger: TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTC...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp TTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCCCTTGCATAGGAAGCTaGGCAGGAGGAGCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: FIGYADFHHGNVGCIPFCPCIGS*AGGASR
Trigger: CCTGCTGGCTCCTCCTGCCCAGCTTCCTATGCAAGG...GCAGAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCTTGCATAGGAAGCTaGGCAGGAGGAGCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRPCIGS*AGGASR
Trigger: CCTGCTGGCTCCTCCTGCCCAGCTTCCTATGCAAGG...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGGTACCAAGAGCGAGCTaGGGACCCAGACTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: LAQAEARSLHWRIGADFLVPRAS*GPRLFV
Trigger: AACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTAC...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR TCA 90 bp TTGGGAGGCCCAGGCAGGCAGATCACCTGGCGAAACTCAGTTGCAAAACAAATTCCTGGGTTCAAATCCTaGCTCTCCCTTCTCATGGAG +
Preference number: 2 (lower is better)
Translates to: LGGPGRQITWRNSVAKQIPGFKS*LSLLME
Trigger: CTCCATGAGAAGGGAGAGTCAGGATTTGAACCCAGG...AATTTGTTTTGCAACTGAGTTTCGCCAGGTGATCTGCCTGCCTGGGCCTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
3UTR-3UTR TCA 90 bp GGGAGGCCCAGGCAGGCAGATCACCTGGCGAAACTCAGTTGCAAAACAAATTTACCTGGGTTCAAATCCTaGCTCTCCCTTCTCATGGAG +
Preference number: 2 (lower is better)
Translates to: GRPRQADHLAKLSCKTNLPGFKS*LSLLME
Trigger: CTCCATGAGAAGGGAGAGTCAGGATTTGAACCCAGG...TAAATTTGTTTTGCAACTGAGTTTCGCCAGGTGATCTGCCTGCCTGGGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
3UTR-3UTR GCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCAGCCAGGTAGATCCCTaGTCTCAGCCTAGCCATGCC +
Preference number: 2 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPSQVDP*SQPSHA
Trigger: GGCATGGCTAGGCTGAGAGCAGGGATCTACCTGGCT...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR GCA 90 bp TTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCAGCCAGGTAGATCCCTaGTCTCAGCCTAGCCATGCC +
Preference number: 2 (lower is better)
Translates to: FIGYADFHHGNVGCIPFCSQVDP*SQPSHA
Trigger: GGCATGGCTAGGCTGAGAGCAGGGATCTACCTGGCT...GCAGAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCCCCTCAACGAGGCACTaGGGTCCCAAGTACCAAGAG +
Preference number: 2 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPPSTRH*GPKYQE
Trigger: CTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGG...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCCCTCAACGAGGCACTaGGGTCCCAAGTACCAAGAG +
Preference number: 2 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSPSTRH*GPKYQE
Trigger: CTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGG...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCCCCTCAACGAGGCACTaGGGTCCCAAGTACCAAGAG +
Preference number: 2 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPPSTRH*GPKYQE
Trigger: CTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGG...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp GGGAGGCCCAGGCAGGCAGATCACCTGGCGAAACTCAGTTGCAAAACAAATTTATGGGACAGGCAGACCTaGGTTCAAATCCTGACTCTC +
Preference number: 2 (lower is better)
Translates to: GRPRQADHLAKLSCKTNLWDRQT*VQILTL
Trigger: GAGAGTCAGGATTTGAACCCAGGTCTGCCTGTCCCA...TAAATTTGTTTTGCAACTGAGTTTCGCCAGGTGATCTGCCTGCCTGGGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
3UTR-3UTR CCA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACACCCTCAACGAGGCACTaGGGTCCCAAGTACCAAGAG +
Preference number: 2 (lower is better)
Translates to: GHPDMTNVRKALSTALGTPSTRH*GPKYQE
Trigger: CTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGG...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCGCACGTGGTTTTAGGTaGCTAGAGCCTCAGCTCTCG +
Preference number: 2 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSARGFR*LEPQLS
Trigger: CGAGAGCTGAGGCTCTAGCCACCTAAAACCACGTGC...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGGCACGTGGTTTTAGGTaGCTAGAGCCTCAGCTCTCG +
Preference number: 2 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRARGFR*LEPQLS
Trigger: CGAGAGCTGAGGCTCTAGCCACCTAAAACCACGTGC...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR TCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCAGCAGCTTGTGTCACTaGAGCTGGACAGAACAGGCT +
Preference number: 2 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPSSLCH*SWTEQA
Trigger: AGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCT...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR GCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGAAAACACAAAGCCTTaGATAGGAAGCTGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: RLFVARLVCVFLPASALGENTKP*IGSWAG
Trigger: TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTC...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR GCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCGTTGCCCGTCTGGTGTaGGTTTTTCTTCCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPVARLV*VFLPAS
Trigger: TGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR GCA 90 bp TTCTTCCTTTTAACAACTGCTGCAGAGGCAATGCAGGGTCAGGGATGTGTGGGACATCACTCGCATGTGTaGACATGCATGCGTTCACAC +
Preference number: 2 (lower is better)
Translates to: FFLLTTAAEAMQGQGCVGHHSHV*TCMRSH
Trigger: GTGTGAACGCATGCATGTGCACACATGCGAGTGATG...TCCCACACATCCCTGACCCTGCATTGCCTCTGCAGCAGTTGTTAAAAGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
3UTR-3UTR CCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGGTACCAAGAGCGAGCTaGGGACCCAGACTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: WRIGADFLLLPTKELRSQVPRAS*GPRLFV
Trigger: AACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTAC...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGTTAAACTGGTGGGTTTaGGCACGTGGTTTTAGGTGG +
Preference number: 2 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPLNWWV*ARGFRW
Trigger: CCACCTAAAACCACGTGCCCAAACCCACCAGTTTAA...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR TCA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCGCACTTGGCACATCATaGGTGTTCGATCCATGTGGC +
Preference number: 2 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFALGTS*VFDPCG
Trigger: GCCACATGGATCGAACACTCATGATGTGCCAAGTGC...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR TCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCCTGGAGAATAGGAGCTaGTTTCCTGCTCCTTCCAAC +
Preference number: 2 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPLENRS*FPAPSN
Trigger: GTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAG...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR GCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGAGCCAGGTAGATCCCTaGTCTCAGCCTAGCCATGCC +
Preference number: 2 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMSQVDP*SQPSHA
Trigger: GGCATGGCTAGGCTGAGAGCAGGGATCTACCTGGCT...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR GCA 90 bp TCTTCTTCCTCTGGGACTGACACTAGACTAAGTTTATCCACAGCCCCGCCTTTCCCTTTTAACAACTGCTaGAGAGGCAATGCAGGGTCA +
Preference number: 2 (lower is better)
Translates to: SSSSGTDTRLSLSTAPPFPFNNC*RGNAGS
Trigger: TGACCCTGCATTGCCTCTGCAGCAGTTGTTAAAAGG...GAAAGGCGGGGCTGTGGATAAACTTAGTCTAGTGTCAGTCCCAGAGGAAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
3UTR-3UTR CCA 90 bp CGAACACACACCGTTTTAAACTGGTGGGTTTGGGCACGTGGTTTTAGGTGGCTATGTTTGTTGCCCGTCTaGTGTGCGTTTTTCTTCCAG +
Preference number: 2 (lower is better)
Translates to: RTHTVLNWWVWARGFRWLCLLPV*CAFFFQ
Trigger: CTGGAAGAAAAACGCACACCAGACGGGCAACAAACA...TAGCCACCTAAAACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp TTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCTTCCTTTCTTCAGAATaGCGCCCTCAACGAGGCACT +
Preference number: 2 (lower is better)
Translates to: FIGYADFHHGNVGCIPFCFLSSE*RPQRGT
Trigger: AGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAA...GCAGAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGTTCCTTTCTTCAGAATaGCGCCCTCAACGAGGCACT +
Preference number: 2 (lower is better)
Translates to: WRIGADFLLLPTKELRSQFLSSE*RPQRGT
Trigger: AGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAA...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGAACCGTTTTAAACTGGTaGGTTTGGGCACGTGGTTTT +
Preference number: 2 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGTVLNW*VWARGF
Trigger: AAAACCACGTGCCCAAACCCACCAGTTTAAAACGGT...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCCACACCGTTTTAAACTaGTGGGTTTGGGCACGTGGT +
Preference number: 2 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPHTVLN*WVWARG
Trigger: ACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTG...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR TCA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCACTTAACTGTGGCTGGTaGTGGCTGCCCACCTCGAGG +
Preference number: 2 (lower is better)
Translates to: KQHKERHHPSILLITKEALNCGW*WLPTSR
Trigger: CCTCGAGGTGGGCAGCCATCACCAGCCACAGTTAAG...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR GCA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCACCCAGACTGTTTGTTaGCCGTCTGGTGTGCGTTTT +
Preference number: 2 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFTQTVC*PSGVRF
Trigger: AAAACGCACACCAGACGGGCAACAAACAGTCTGGGT...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp TTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCTGTTTGTTGCCCGTCTaGTGTGCGTTTTTCTTCCAG +
Preference number: 2 (lower is better)
Translates to: FIGYADFHHGNVGCIPFCCLLPV*CAFFFQ
Trigger: CTGGAAGAAAAACGCACACCAGACGGGCAACAAACA...GCAGAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCTTAAACTGGTGGGTTTaGGCACGTGGTTTTAGGTGG +
Preference number: 2 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPLNWWV*ARGFRW
Trigger: CCACCTAAAACCACGTGCCCAAACCCACCAGTTTAA...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCTTAAACTGGTGGGTTTaGGCACGTGGTTTTAGGTGG +
Preference number: 2 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSLNWWV*ARGFRW
Trigger: CCACCTAAAACCACGTGCCCAAACCCACCAGTTTAA...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCACACACCGTTTTAAACTaGTGGGTTTGGGCACGTGGT +
Preference number: 2 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPHTVLN*WVWARG
Trigger: ACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTG...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR TCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGAGCAGCTTGTGTCACTaGAGCTGGACAGAACAGGCT +
Preference number: 2 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMSSLCH*SWTEQA
Trigger: AGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCT...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCATTAAACTGGTGGGTTTaGGCACGTGGTTTTAGGTGG +
Preference number: 2 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPLNWWV*ARGFRW
Trigger: CCACCTAAAACCACGTGCCCAAACCCACCAGTTTAA...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGACCGTTTTAAACTGGTaGGTTTGGGCACGTGGTTTT +
Preference number: 2 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRTVLNW*VWARGF
Trigger: AAAACCACGTGCCCAAACCCACCAGTTTAAAACGGT...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCACGATGGAATACATGTTaGGGGGCTTGGCTTAACTGT +
Preference number: 2 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPRWNTC*GAWLNC
Trigger: ACAGTTAAGCCAAGCCCCCCAACATGTATTCCATCG...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR TCA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGTCTCACAGGCAGTaGACTCTGTGGGCCACACAG +
Preference number: 2 (lower is better)
Translates to: MLKKQHKERHHPSILLITKSHRQ*TLWATQ
Trigger: CTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTT...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR GCA 90 bp ATTATTATCTATATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAAGAAAACACAAAGCCTTaGATAGGAAGCTGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: IIIYISTLKSALQFLSSEENTKP*IGSWAG
Trigger: TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTC...TTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATAGATAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR GCA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCAACCCAGACTGTTTGTTaGCCGTCTGGTGTGCGTTTT +
Preference number: 2 (lower is better)
Translates to: KQHKERHHPSILLITKEATQTVC*PSGVRF
Trigger: AAAACGCACACCAGACGGGCAACAAACAGTCTGGGT...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTACCGTTTTAAACTGGTaGGTTTGGGCACGTGGTTTT +
Preference number: 2 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSTVLNW*VWARGF
Trigger: AAAACCACGTGCCCAAACCCACCAGTTTAAAACGGT...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CAA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTaGTTGCCCGTCTGGTGTGCG +
Preference number: 3 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAGDPDC*LPVWCA
Trigger: CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR CCA 72 bp AACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTaGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGC +
Preference number: 3 (lower is better)
Translates to: NEALGSQVPRAS*GPRLFVARLVC
Trigger: GCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR CCA 72 bp GTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTaGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCA +
Preference number: 3 (lower is better)
Translates to: VPFFRMAPSTRH*GPKYQERAGDP
Trigger: TGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR GCA 72 bp CTTCCAACCAAAGAACTGAGAAGCCAGGTAGATCCCTaGTCTCAGCCTAGCCATGCCGGAACCCGCGGGACT +
Preference number: 3 (lower is better)
Translates to: LPTKELRSQVDP*SQPSHAGTRGT
Trigger: AGTCCCGCGGGTTCCGGCATGGCTAGGCTGAGAGCAGGGATCTACCTGGCTTCTCAGTTCTTTGGTTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR CCA 72 bp GAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTaGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTG +
Preference number: 3 (lower is better)
Translates to: ERAGDPDCLLPV*CAFFFQPQHLV
Trigger: CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR CCA 72 bp ACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATaGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACC +
Preference number: 3 (lower is better)
Translates to: TLKSALQFLSSE*RPQRGTGVPST
Trigger: GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CAA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGGGGGACCCAGACTGTTaGTTGCCCGTCTGGTGTGCG +
Preference number: 3 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPGDPDC*LPVWCA
Trigger: CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR CCA 72 bp GCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTaGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACC +
Preference number: 3 (lower is better)
Translates to: ASLAQAEARSLH*RIGADFLLLPT
Trigger: GGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CAA 90 bp CACTGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCTTAAGGCCGAGCCCTaGTCTCACTCCAGGAGGGCA +
Preference number: 3 (lower is better)
Translates to: HWRIGADFLLLPTKELRSLKAEP*SHSRRA
Trigger: TGCCCTCCTGGAGTGAGACAAGGGCTCGGCCTTAAG...GCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CAA 90 bp CGAACACACACCGTTTTAAACTGGTGGGTTTGGGCACGTGGTTTTAGGTGGCTAGACCCAGACTGTTTGTaGCCCGTCTGGTGTGCGTTT +
Preference number: 3 (lower is better)
Translates to: RTHTVLNWWVWARGFRWLDPDCL*PVWCAF
Trigger: AAACGCACACCAGACGGGCAACAAACAGTCTGGGTC...TAGCCACCTAAAACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CAA 90 bp CACTGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCGACCCAGACTGTTTGTaGCCCGTCTGGTGTGCGTTT +
Preference number: 3 (lower is better)
Translates to: HWRIGADFLLLPTKELRSDPDCL*PVWCAF
Trigger: AAACGCACACCAGACGGGCAACAAACAGTCTGGGTC...GCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR TCA 72 bp GTGGCTAGAGCCTCAGCTCTCGAGGTCATCCTGATATaGCGAATGTTCGTAAAGCACTTAGCACAGCACTTG +
Preference number: 3 (lower is better)
Translates to: VARASALEVILI*RMFVKHLAQHL
Trigger: CAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACCTCGAGAGCTGAGGCTCTAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CAA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCACTTAGCACAGCACTaGGCACATCATGAGTGTTCG +
Preference number: 3 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSHLAQH*AHHECS
Trigger: CGAACACTCATGATGTGCCAAGTGCTGTGCTAAGTG...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CAA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCAGACAGAACAGGCTTCTaGTACCCTAAACAAGCTACC +
Preference number: 3 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPDRTGF*YPKQAT
Trigger: GGTAGCTTGTTTAGGGTACAAGAAGCCTGTTCTGTC...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CAA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAAAACCTGGCACAGGCCTaGGCATCTCTAGCCCAAGCT +
Preference number: 3 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQNLAQA*ASLAQA
Trigger: AGCTTGGGCTAGAGATGCCAAGGCCTGTGCCAGGTT...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CAA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAAGACCCAGACTGTTTGTaGCCCGTCTGGTGTGCGTTT +
Preference number: 3 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQDPDCL*PVWCAF
Trigger: AAACGCACACCAGACGGGCAACAAACAGTCTGGGTC...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR GCA 72 bp TTATTATTATCTATATCTCCACCCTCAAATCGGCGCTaGAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAG +
Preference number: 3 (lower is better)
Translates to: LLLSISPPSNRR*SSFLQNGALNE
Trigger: CTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATAGATAATAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR CCA 72 bp AATTTATTGGTTACGCAGACTTCCATCATGGGAATGTaGGGTGCATTCCCTTCTGCATTCACACACACCACT +
Preference number: 3 (lower is better)
Translates to: NLLVTQTSIMGM*GAFPSAFTHTT
Trigger: AGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR CCA 72 bp AAAGGCACAATTTATTGGTTACGCAGACTTCCATCATaGGAATGTGGGGTGCATTCCCTTCTGCATTCACAC +
Preference number: 3 (lower is better)
Translates to: KGTIYWLRRLPS*ECGVHSLLHSH
Trigger: GTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR-3UTR CAA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGACAGAACAGGCTTCTaGTACCCTAAACAAGCTACC +
Preference number: 3 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSDRTGF*YPKQAT
Trigger: GGTAGCTTGTTTAGGGTACAAGAAGCCTGTTCTGTC...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCCCGGGGCCTGGGAGCTaGCCGGGGTCTTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLPGPGS*PGSWAS
Trigger: GGAAGCCCAAGACCCCGGTCAGCTCCCAGGCCCCGG...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCACCTCCGGCCGGTGCTTaGCGTGATGCGGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSPPAGA*RDAGAR
Trigger: CCGAGCTCCCGCATCACGGCAAGCACCGGCCGGAGG...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCCCTCCGGCCGGTGCTTaGCGTGATGCGGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLPPAGA*RDAGAR
Trigger: CCGAGCTCCCGCATCACGGCAAGCACCGGCCGGAGG...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGGCCGGCACCGGGGCCTaGGAGCTGACCGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQAGTGA*ELTGVL
Trigger: CAAGACCCCGGTCAGCTCCCAGGCCCCGGTGCCGGC...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCACCGTCCCCTACACCCTaGCACGGCTGCCGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVAPSPTP*HGCRGS
Trigger: AGAGCCGCGGCAGCCGTGGCAGGGTGTAGGGGACGG...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CCA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGAGCAGGGGACCATGGTaGGCGTGGGCCTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQSRGPW*AWASSA
Trigger: GGCCGAGGAGGCCCACGCCCACCATGGTCCCCTGCT...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGCAGAGGATGAGCACGTaGAGGAGCGCAGCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQQRMST*RSAAGA
Trigger: CGCCCCGGCTGCGCTCCTTCACGTGCTCATCCTCTG...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCGCCCTCGGCAGAGGATaGGCACGTGAAGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLALGRG*AREGAQ
Trigger: CTGCGCTCCTTCACGTGCTCATCCTCTGCCGAGGGC...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTACACCCTGCCACGGCTaGCGCGGCTCTCTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSTPCHG*RGSLAS
Trigger: GCTGGCAAGAGAGCCGCGGCAGCCGTGGCAGGGTGT...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR GCA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTTCGCGGCCCTTGGAGTaGTGGAGGTGCAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSSRPLE*WRCSTA
Trigger: GGCGGTGCTGCACCTCCAGCACTCCAAGGGCCGCGA...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCCACGTGCAGGGGCATTaGTGGCCCAAAGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLHVQGH*WPKGPH
Trigger: GTGGGGCCCTTTGGGCCACCAATGCCCCTGCACGTG...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTCCAGCGGGGAGTCCTTaGGCGGCTGGTCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSPAGSP*AAGRSS
Trigger: GGAGCTACGACCAGCCGCCCAAGGACTCCCCGCTGG...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGAGGCCGGTGCTTGCCGTaGTGCGGGAGCTCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: ALNEALGSQVPRASWGPRGRCLP*CGSSVL
Trigger: CAACACCGAGCTCCCGCATCACGGCAAGCACCGGCC...TCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGCCCGTTGCCTCTTGGTaGCCTCGGCTGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQPVASW*PRLLPP
Trigger: TGGTGGCAGCAGCCGAGGCCACCAAGAGGCAACGGG...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGTCTTGGGCTTCCCTTaGCTCTTGTCCCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVAVLGFP*LLSPPA
Trigger: GGCCGGCGGGGACAAGAGCCAAGGGAAGCCCAAGAC...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGGCCGGCACCGGGGCCTaGGAGCTGACCGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPAGTGA*ELTGVL
Trigger: CAAGACCCCGGTCAGCTCCCAGGCCCCGGTGCCGGC...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCACGGGAGAGGGTCCAGTaGCTTCACGCCGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSRERVQ*LHAVPL
Trigger: CAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCG...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCACCGCCTTGGAGCGGGTaGTGTTGCCATGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVAPPWSG*CCHGSS
Trigger: GCTGGAACCATGGCAACATCACCCGCTCCAAGGCGG...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTCAGGTCACTGGGCCTTaGCTCCTGTGTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSQVTGP*LLCPGR
Trigger: CCTCCCAGGACACAGGAGTCAAGGCCCAGTGACCTG...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGAGCGGCAGGTCCTCCTaGGGCAGCGTGTCCCCTGCG +
Preference number: 4 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPSGRSS*GSVSPA
Trigger: CGCAGGGGACACGCTGCCTCAGGAGGACCTGCCGCT...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGCCTCCTGGGCTTTGGTaGGCACGATGCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQPPGLW*ARCWAT
Trigger: TGTCGCCCAGCATCGTGCTCACCAAAGCCCAGGAGG...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGCCGATCTGGAAGGCTTaGTGGGCCTCTTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQPIWKA*WASWPA
Trigger: TGCCGGCCAAGAGGCCCATCAAGCCTTCCAGATCGG...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCCTTAACTGTGGCTGGTaGTGGCTGCCCACCTCGAGG +
Preference number: 4 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLLNCGW*WLPTSR
Trigger: CCTCGAGGTGGGCAGCCATCACCAGCCACAGTTAAG...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCACCCTCCACTGCAACCTaGCGCCCGTTGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVAPSTAT*RPLPLG
Trigger: ACCAAGAGGCAACGGGCGGCAGGTTGCAGTGGAGGG...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCACACGCAGAGCGCGTATaGCCGGGAGATGGACTCGCT +
Preference number: 4 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVAHAERV*PGDGLA
Trigger: AGCGAGTCCATCTCCCGGGCATACGCGCTCTGCGTG...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCCTGATCCGGTTCTCGTaGTCAGGCTTGGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLLIRFS*SGLAST
Trigger: GGTGCTGGCCAAGCCTGAGCACGAGAACCGGATCAG...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGAGCAGGGGACCATGGTaGGCGTGGGCCTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPSRGPW*AWASSA
Trigger: GGCCGAGGAGGCCCACGCCCACCATGGTCCCCTGCT...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGAGCAGCTGGTCGTaGGACAGGAGGTCTGCGTAC +
Preference number: 4 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSVSSWS*DRRSAY
Trigger: GTACGCAGACCTCCTGTCCCACGACCAGCTGCTCAC...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGAGGGCTTCACTGCATaGCAGTCCTGCCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSEGFTA*QSCLEA
Trigger: GGCCTCTAGGCAGGACTGCCATGCAGTGAAGCCCTC...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCACGGGAGAGGGTCCAGTaGCTTCACGCCGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVARERVQ*LHAVPL
Trigger: CAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCG...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGGGCTCCGGCTGCTCTaGGTGCTTGTTCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSGLRLL*VLVLHL
Trigger: CAGATGAAGAACAAGCACTCAGAGCAGCCGGAGCCC...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGAGCGGCAGGTCCTCCTaGGGCAGCGTGTCCCCTGCG +
Preference number: 4 (lower is better)
Translates to: KYQERAGDPDCLLPVWCASGRSS*GSVSPA
Trigger: CGCAGGGGACACGCTGCCTCAGGAGGACCTGCCGCT...CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTCCGGGGCCTGGGAGCTaGCCGGGGTCTTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFPGPGS*PGSWAS
Trigger: GGAAGCCCAAGACCCCGGTCAGCTCCCAGGCCCCGG...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGAATAAGGGAGGGCCGGTaGGGAGACTCAGGACCCTCG +
Preference number: 4 (lower is better)
Translates to: ALNEALGSQVPRASWGPRIREGR*GDSGPS
Trigger: CGAGGGTCCTGAGTCTCCGCACCGGCCCTCCCTTAT...TCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGCCTCCGGCCGGTGCTTaGCGTGATGCGGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: KYQERAGDPDCLLPVWCAPPAGA*RDAGAR
Trigger: CCGAGCTCCCGCATCACGGCAAGCACCGGCCGGAGG...CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGAGGGAGATGGACTCGCTaGCACGCACGAGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: ALNEALGSQVPRASWGPRGRWTR*HARGSS
Trigger: GGAGCTTCCTCGTGCGTGCCAGCGAGTCCATCTCCC...TCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACGTATGCCCGGGAGATaGACTCGCTGGCACGCACGA +
Preference number: 4 (lower is better)
Translates to: ALNEALGSQVPRASWGPRRMPGR*TRWHAR
Trigger: TCGTGCGTGCCAGCGAGTCCATCTCCCGGGCATACG...TCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCATGGCCTCACAGGAGCTaGCAGTCAGCGGGATGTTTC +
Preference number: 4 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSWPHRS*QSAGCF
Trigger: GAAACATCCCGCTGACTGCCAGCTCCTGTGAGGCCA...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCCACCTCAAAGGTGACTaGAGGGATAAGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLHLKGD*RDKGGP
Trigger: CGGCCCTCCCTTATCCCTCCAGTCACCTTTGAGGTG...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTTCTCGTGCTCAGGCTTaGCCAGCACCACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSSRAQA*PAPRCG
Trigger: TCCGCATCGTGGTGCTGGCCAAGCCTGAGCACGAGA...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCTGCTTCATGGGGTCGTaGCTGGTGAGGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLCFMGS*LVRLFR
Trigger: CCTGAAGAGCCTCACCAGCCACGACCCCATGAAGCA...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCTTGACTCCTGTGTCCTaGGAGGGAGACCCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLLTPVS*EGDPGL
Trigger: CAAACCGGGGTCTCCCTCCCAGGACACAGGAGTCAA...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTGCCGGCACCGGGGCCTaGGAGCTGACCGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PRASWGPRLFVARLVCVFAGTGA*ELTGVL
Trigger: CAAGACCCCGGTCAGCTCCCAGGCCCCGGTGCCGGC...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGCGGCCCTTGGAGTGCTaGAGGTGCAGCACCGCCGGG +
Preference number: 4 (lower is better)
Translates to: KYQERAGDPDCLLPVWCARPLEC*RCSTAG
Trigger: CCCGGCGGTGCTGCACCTCCAGCACTCCAAGGGCCG...CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCACCTTGCATAGGAAGCTaGGCAGGAGGAGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVAPCIGS*AGGASR
Trigger: CCTGCTGGCTCCTCCTGCCCAGCTTCCTATGCAAGG...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCCGTGCAGCAAGGCCTTaGCCTTGTCTTCAATGGACG +
Preference number: 4 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLRAARP*PCLQWT
Trigger: CGTCCATTGAAGACAAGGTCAAGGCCTTGCTGCACG...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTAGCGGCAGGTCCTCCTaGGGCAGCGTGTCCCCTGCG +
Preference number: 4 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFSGRSS*GSVSPA
Trigger: CGCAGGGGACACGCTGCCTCAGGAGGACCTGCCGCT...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGAAGCTCCCGTCCTTaGCTGTCCTGGAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSGSSRP*LSWKAA
Trigger: AGCTGCTTTCCAGGACAGGCAAGGACGGGAGCTTCC...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGAAGCGGCACAGGGTATTaGAGATGGGTCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ALNEALGSQVPRASWGPRSGTGY*RWVTSP
Trigger: GGGGCTGGTGACCCATCTGCAATACCCTGTGCCGCT...TCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTTCCCGCGTCTTTCCCTaGCCCTTGGAGAGAAACCAG +
Preference number: 4 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSSRVFP*PLERNQ
Trigger: CTGGTTTCTCTCCAAGGGGCAGGGAAAGACGCGGGA...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCACTAGTGACTTCCCACTaGTTCATGGGGTCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSLVTSH*FMGSWL
Trigger: CAGCCACGACCCCATGAAGCAGTGGGAAGTCACTAG...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCCTAGTGACTTCCCACTaGTTCATGGGGTCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLLVTSH*FMGSWL
Trigger: CAGCCACGACCCCATGAAGCAGTGGGAAGTCACTAG...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTAGCCAGGTAGATCCCTaGTCTCAGCCTAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSSQVDP*SQPSHA
Trigger: GGCATGGCTAGGCTGAGAGCAGGGATCTACCTGGCT...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGATCTCGTGCTCAGGCTTaGCCAGCACCACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: ALNEALGSQVPRASWGPRSRAQA*PAPRCG
Trigger: TCCGCATCGTGGTGCTGGCCAAGCCTGAGCACGAGA...TCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTATCTCCCCCTGGAAGTaGCCTGTCAACTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSISPWK*PVNSPW
Trigger: CCATGGGGAGTTGACAGGCCACTTCCAGGGGGAGAT...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTTCTTCCCCAGGTCACTaGGCCTTGACTCCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSSSPGH*ALTPVS
Trigger: GGACACAGGAGTCAAGGCCCAGTGACCTGGGGAAGA...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACGGCCCTTGGAGTGCTaGAGGTGCAGCACCGCCGGG +
Preference number: 4 (lower is better)
Translates to: PSNRRCSSFLQNGALNEARPLEC*RCSTAG
Trigger: CCCGGCGGTGCTGCACCTCCAGCACTCCAAGGGCCG...TGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGCCCTGGCAGCCAGGCTaGAGAGCACGGCTTTCGGGA +
Preference number: 4 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPPWQPG*RARLSG
Trigger: TCCCGAAAGCCGTGCTCTCCAGCCTGGCTGCCAGGG...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGCTTGCAGGGAGTGTTTaGGGATCTCCAGCCACTCCT +
Preference number: 4 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQLAGSV*GSPATP
Trigger: AGGAGTGGCTGGAGATCCTCAAACACTCCCTGCAAG...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGCAGGTCACTGGGCCTTaGCTCCTGTGTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPQVTGP*LLCPGR
Trigger: CCTCCCAGGACACAGGAGTCAAGGCCCAGTGACCTG...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCAGAGGATGAGCACGTaGAGGAGCGCAGCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQQRMST*RSAAGA
Trigger: CGCCCCGGCTGCGCTCCTTCACGTGCTCATCCTCTG...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGGGCCGGTGCTTGCCGTaGTGCGGGAGCTCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQGRCLP*CGSSVL
Trigger: CAACACCGAGCTCCCGCATCACGGCAAGCACCGGCC...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCGGCCGGTGCTTGCCGTaGTGCGGGAGCTCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTGRCLP*CGSSVL
Trigger: CAACACCGAGCTCCCGCATCACGGCAAGCACCGGCC...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAAAGTCTCACAGGCAGTaGACTCTGTGGGCCACACAG +
Preference number: 4 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVAKSHRQ*TLWATQ
Trigger: CTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTT...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGAGAGAAGTGGTTCTTCTaGGGCCGTGCTGACACCCAC +
Preference number: 4 (lower is better)
Translates to: ALNEALGSQVPRASWGPREKWFF*GRADTH
Trigger: GTGGGTGTCAGCACGGCCGCAGAAGAACCACTTCTC...TCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR GCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCCGGAGGCCCCTCCACTaGAACCTGCCGCCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSRRPLH*NLPPVA
Trigger: GGCAACGGGCGGCAGGTTGCAGTGGAGGGGCCTCCG...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAATGTCGGGCTCCGGCTaGTCTGAGTGCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVAMSGSG*SECLFF
Trigger: GAAGAACAAGCACTCAGAGCAGCCGGAGCCCGACAT...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGAGCTTCTCCCTCGTCTTaGCCTGAGAGGTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: ALNEALGSQVPRASWGPRASPSS*PERSAA
Trigger: AGCTGCAGACCTCTCAGGGCAAGACGAGGGAGAAGC...TCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGTCAGGGGACAAGGTCTaGTTCACGTGCAGGGGCATT +
Preference number: 4 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQSGDKV*FTCRGI
Trigger: AATGCCCCTGCACGTGAAGCAGACCTTGTCCCCTGA...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCATCAGGGGACAAGGTCTaGTTCACGTGCAGGGGCATT +
Preference number: 4 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVASGDKV*FTCRGI
Trigger: AATGCCCCTGCACGTGAAGCAGACCTTGTCCCCTGA...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGTGCTGGGCGACAAGATaGCGGGTTCCGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQCWATR*RVPGRA
Trigger: CGCCCTGCCCGGAACCCGGCATCTTGTCGCCCAGCA...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTTGGAGTGCTGGAGGTaGAGCACCGCCGGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPLECWR*STAGLL
Trigger: CAAGAGCCCGGCGGTGCTGCACCTCCAGCACTCCAA...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCTCCCTTCTCATGGAGCAGTTCCCAGGACCATCACTCGCATGTGTGCACATGCCCTCCGGCCGGTGCTTaGCGTGATGCGGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SPFSWSSSQDHHSHVCTCPPAGA*RDAGAR
Trigger: CCGAGCTCCCGCATCACGGCAAGCACCGGCCGGAGG...GCATGTGCACACATGCGAGTGATGGTCCTGGGAACTGCTCCATGAGAAGGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR CCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCTCCAGCAGGGGACCATaGTGGGCGTGGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLSSRGP*WAWASS
Trigger: CGAGGAGGCCCACGCCCACCATGGTCCCCTGCTGGA...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCTCCAGCAGGGGACCATaGTGGGCGTGGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTSSRGP*WAWASS
Trigger: CGAGGAGGCCCACGCCCACCATGGTCCCCTGCTGGA...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGAGAGGCTCGGCCGGCTaGTCTCGGTCGCTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQRGSAG*SRSLGD
Trigger: ATCCCCGAGCGACCGAGACCAGCCGGCCGAGCCTCT...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTCCCGGGGAGAGCTGCTaGTCAAATAACCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSPGESC*SNNLCR
Trigger: TCTGCAGAGGTTATTTGACCAGCAGCTCTCCCCGGG...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGCAGCTGCGTTTCTGTaGCCTCTAACCGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVAAAAFL*PLTEGQ
Trigger: TTGCCCTTCGGTTAGAGGCCACAGAAACGCAGCTGC...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGCTCTTCAGGGTCTTTaGCCCACTGGATTCATCACG +
Preference number: 4 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSALQGL*PTGFIT
Trigger: CGTGATGAATCCAGTGGGCCAAAGACCCTGAAGAGC...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGTGCAGGGGCATTGGTaGCCCAAAGGGCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAVQGHW*PKGPHS
Trigger: GGAGTGGGGCCCTTTGGGCCACCAATGCCCCTGCAC...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTCACGTGCAGGGGCATTaGTGGCCCAAAGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAHVQGH*WPKGPH
Trigger: GTGGGGCCCTTTGGGCCACCAATGCCCCTGCACGTG...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCCAGCGGGGAGTCCTTaGGCGGCTGGTCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQPAGSP*AAGRSS
Trigger: GGAGCTACGACCAGCCGCCCAAGGACTCCCCGCTGG...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACCTTCCGCGGCATTTTaGGGGATTCCTGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: ALNEALGSQVPRASWGPRPSAAF*GIPGPS
Trigger: GGAAGGACCAGGAATCCCCCAAAATGCCGCGGAAGG...TCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGGTGGGCGGGGTCTGCTaGTTGATTTCCGATCTGGAA +
Preference number: 4 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQVGGVC*LISDLE
Trigger: TTCCAGATCGGAAATCAACCAGCAGACCCCGCCCAC...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAAGGTGCGTGAAGCGGTaGGTGATGTTAAAGGGACTC +
Preference number: 4 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVARCVKR*VMLKGL
Trigger: GAGTCCCTTTAACATCACTCACCGCTTCACGCACCT...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCACTCCTTCCTGACTCTTaGCAAAACTCTCCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSLLPDS*QNSPSS
Trigger: GCTGCTTGGAGAGTTTTGTCAAGAGTCAGGAAGGAG...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCCGGGGCCTGGGAGCTaGCCGGGGTCTTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSPGPGS*PGSWAS
Trigger: GGAAGCCCAAGACCCCGGTCAGCTCCCAGGCCCCGG...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGCTTAACTGTGGCTGGTaGTGGCTGCCCACCTCGAGG +
Preference number: 4 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPLNCGW*WLPTSR
Trigger: CCTCGAGGTGGGCAGCCATCACCAGCCACAGTTAAG...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTCGGAGGCCCCTCCACTaGAACCTGCCGCCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: PRLFVARLVCVFLPASALRRPLH*NLPPVA
Trigger: GGCAACGGGCGGCAGGTTGCAGTGGAGGGGCCTCCG...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAAATCCCCAGAGACTCTaGCTTCACCTCAAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSNPQRL*LHLKGD
Trigger: GTCACCTTTGAGGTGAAGGCAGAGTCTCTGGGGATT...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCATTGTTCTTCATCTGCTaGAGGAGCTGGCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSLFFIC*RSWQKP
Trigger: AGGCTTCTGCCAGCTCCTGCAGCAGATGAAGAACAA...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGCTGATCCGGTTCTCGTaGTCAGGCTTGGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPLIRFS*SGLAST
Trigger: GGTGCTGGCCAAGCCTGAGCACGAGAACCGGATCAG...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGCCTCCGGCCGGTGCTTaGCGTGATGCGGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWPPAGA*RDAGAR
Trigger: CCGAGCTCCCGCATCACGGCAAGCACCGGCCGGAGG...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCCATGGGAATGTGGGGTaGATTCCCTTCTGCATTCAC +
Preference number: 4 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLHGNVG*IPFCIH
Trigger: GTGAATGCAGAAGGGAATGCACCCCACATTCCCATG...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCAATGCAGGGTCAGGGATGTGTGGGACAGGCAGACCTGGGTTCAAATCCTGACCCTGCATGGCAGTCCTaGCTAGAGGCCCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AMQGQGCVGQADLGSNPDPAWQS*LEALVA
Trigger: GGCCACCAGGGCCTCTAGGCAGGACTGCCATGCAGG...GTCAGGATTTGAACCCAGGTCTGCCTGTCCCACACATCCCTGACCCTGCATTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR CCA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAACCGCCCGTTGCCTCTTaGTGGCCTCGGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: VSQAVNSVGHTEARPFPEPPVAS*WPRLLP
Trigger: TGGCAGCAGCCGAGGCCACCAAGAGGCAACGGGCGG...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTAGCAGGGGACCATGGTaGGCGTGGGCCTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTSRGPW*AWASSA
Trigger: GGCCGAGGAGGCCCACGCCCACCATGGTCCCCTGCT...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAATCCAGCAGGGGACCATaGTGGGCGTGGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: VSQAVNSVGHTEARPFPESSRGP*WAWASS
Trigger: CGAGGAGGCCCACGCCCACCATGGTCCCCTGCTGGA...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGCGTATGCCCGGGAGATaGACTCGCTGGCACGCACGA +
Preference number: 4 (lower is better)
Translates to: KYQERAGDPDCLLPVWCARMPGR*TRWHAR
Trigger: TCGTGCGTGCCAGCGAGTCCATCTCCCGGGCATACG...CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAGGAACCTGAGGACGTaGACGGAGGCCCGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTRNLRT*TEARGE
Trigger: CTCTCCCCGGGCCTCCGTCCACGTCCTCAGGTTCCT...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACGTGCAGGGGCATTaGTGGCCCAAAGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQHVQGH*WPKGPH
Trigger: GTGGGGCCCTTTGGGCCACCAATGCCCCTGCACGTG...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCGGTGATATGGGCGGCTaGCCGGGAGGTGTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLGDMGG*PGGVGG
Trigger: TCCTCCGACACCTCCCGGCCAGCCGCCCATATCACC...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGAATTTTGGGGGATTCCTaGTCCTTCCTGGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ALNEALGSQVPRASWGPRILGDS*SFLGAG
Trigger: GCCTGCTCCCAGGAAGGACCAGGAATCCCCCAAAAT...TCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGCCGCGATCAGCCTCCTaGGCTTTGGTGAGCACGATG +
Preference number: 4 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPPRSAS*ALVSTM
Trigger: CATCGTGCTCACCAAAGCCCAGGAGGCTGATCGCGG...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCGTCTTGGGCTTCCCTTaGCTCTTGTCCCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLVLGFP*LLSPPA
Trigger: GGCCGGCGGGGACAAGAGCCAAGGGAAGCCCAAGAC...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGAGCCGGCACCGGGGCCTaGGAGCTGACCGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGAGTGA*ELTGVL
Trigger: CAAGACCCCGGTCAGCTCCCAGGCCCCGGTGCCGGC...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGCGGCCCTTGGAGTGCTaGAGGTGCAGCACCGCCGGG +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWRPLEC*RCSTAG
Trigger: CCCGGCGGTGCTGCACCTCCAGCACTCCAAGGGCCG...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCTTCCTTTCTTCAGAATaGCGCCCTCAACGAGGCACT +
Preference number: 4 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLFLSSE*RPQRGT
Trigger: AGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAA...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCCCCTGGCAGCCAGGCTaGAGAGCACGGCTTTCGGGA +
Preference number: 4 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTPWQPG*RARLSG
Trigger: TCCCGAAAGCCGTGCTCTCCAGCCTGGCTGCCAGGG...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGGCCTCACCAGGAACCTaGGGACGTGGACGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LAQAEARSLHWRIGADFLASPGT*GRGRRP
Trigger: GGGCCTCCGTCCACGTCCTCAGGTTCCTGGTGAGGC...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTGCCTCACCAGGAACCTaGGGACGTGGACGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: VARLVCVFLPASALGAKSASPGT*GRGRRP
Trigger: GGGCCTCCGTCCACGTCCTCAGGTTCCTGGTGAGGC...AGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTAAGTCAAGTGGCTGTTaGCGAACCCTAAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSKSSGC*RTLRRF
Trigger: GAACCTCCTTAGGGTTCGTCAACAGCCACTTGACTT...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAACTCCCCATGGTGGGTaGGAGGCGTGTAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: AQALASLAQAEARSLHWRTPHGG*EACRWA
Trigger: TGCCCATCTACACGCCTCTCACCCACCATGGGGAGT...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTAGCGGCAGGTCCTCCTaGGGCAGCGTGTCCCCTGCG +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGSGRSS*GSVSPA
Trigger: CGCAGGGGACACGCTGCCTCAGGAGGACCTGCCGCT...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCCCTCCTGGGCTTTGGTaGGCACGATGCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTPPGLW*ARCWAT
Trigger: TGTCGCCCAGCATCGTGCTCACCAAAGCCCAGGAGG...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCAGAGGATGAGCACGTaGAGGAGCGCAGCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVQRMST*RSAAGA
Trigger: CGCCCCGGCTGCGCTCCTTCACGTGCTCATCCTCTG...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTGGCCGGTGCTTGCCGTaGTGCGGGAGCTCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTGRCLP*CGSSVL
Trigger: CAACACCGAGCTCCCGCATCACGGCAAGCACCGGCC...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCGGAGGCCCCTCCACTaGAACCTGCCGCCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSRRPLH*NLPPVA
Trigger: GGCAACGGGCGGCAGGTTGCAGTGGAGGGGCCTCCG...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTCTGGTGTCCATGCTTTaGAGTCGCTGGAACAATGTC +
Preference number: 4 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSLVSML*SRWNNV
Trigger: GACATTGTTCCAGCGACTGCAAAGCATGGACACCAG...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGCTGGTGTCCATGCTTTaGAGTCGCTGGAACAATGTC +
Preference number: 4 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQLVSML*SRWNNV
Trigger: GACATTGTTCCAGCGACTGCAAAGCATGGACACCAG...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCACCTGGGCGAGCTGAGTaGTTAAATAATCTTGGATGG +
Preference number: 4 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSPGRAE*LNNLGW
Trigger: CCATCCAAGATTATTTAAGCACTCAGCTCGCCCAGG...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGATAAGGGAGGGCCGGTaGGGAGACTCAGGACCCTCG +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQIREGR*GDSGPS
Trigger: CGAGGGTCCTGAGTCTCCGCACCGGCCCTCCCTTAT...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGGTCTGCGTACTGCTaGTGCTTGATTTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLRSAYC*CLIFWM
Trigger: CATCCAGAAAATCAAGCAGCAGCAGTACGCAGACCT...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTCTGGGAAGTGACTCCTaGCTCAAATGTGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSLGSDS*LKCGKD
Trigger: GTCTTTGCCACATTTGAGGCAGGAGTCACTTCCCAG...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGAGGCAGCGTGTCCCCTaGGTTCTTCCCCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: KYQERAGDPDCLLPVWCARQRVP*VLPQVT
Trigger: AGTGACCTGGGGAAGAACGCAGGGGACACGCTGCCT...CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTCGCGGCCCTTGGAGTaGTGGAGGTGCAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTSRPLE*WRCSTA
Trigger: GGCGGTGCTGCACCTCCAGCACTCCAAGGGCCGCGA...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGGAGGGCACTGGGCTTCTTAATGCTTTCACCCCTCCGAACACACACCGTTTTTCGCGGCCCTTGGAGTaGTGGAGGTGCAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: QEGTGLLNAFTPPNTHRFSRPLE*WRCSTA
Trigger: GGCGGTGCTGCACCTCCAGCACTCCAAGGGCCGCGA...AAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAGAAGCCCAGTGCCCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTCGCGGCCCTTGGAGTaGTGGAGGTGCAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWSRPLE*WRCSTA
Trigger: GGCGGTGCTGCACCTCCAGCACTCCAAGGGCCGCGA...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCCCCTCAAATCGGCGCTaGAGTTCCTTTCTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLPSNRR*SSFLQN
Trigger: ATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCAATGCAGGGTCAGGGATGTGTGGGACAGGCAGACCTGGGTTCAAATCCTGACGTGGCGCAGCGCACCTaGATGGCAGTCCTGCCTAGA +
Preference number: 4 (lower is better)
Translates to: AMQGQGCVGQADLGSNPDVAQRT*MAVLPR
Trigger: TCTAGGCAGGACTGCCATGCAGGTGCGCTGCGCCAC...GTCAGGATTTGAACCCAGGTCTGCCTGTCCCACACATCCCTGACCCTGCATTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR CCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGACGTCCTTGCCTGTCCTaGAAAGCAGCTCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: AQALASLAQAEARSLHWRRPCLS*KAAPPP
Trigger: AGGCGGAGGAGCTGCTTTCCAGGACAGGCAAGGACG...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCGGGAGATGGACTCGCTaGCACGCACGAGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTGRWTR*HARGSS
Trigger: GGAGCTTCCTCGTGCGTGCCAGCGAGTCCATCTCCC...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGGAGGGCACTGGGCTTCTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAGAGGCTCGGCCGGCTaGTCTCGGTCGCTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: QEGTGLLNAFTPPNTHRFRGSAG*SRSLGD
Trigger: ATCCCCGAGCGACCGAGACCAGCCGGCCGAGCCTCT...AAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAGAAGCCCAGTGCCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGTTGTCAGTACAGATGTaGCTGATCCGGTTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQLSVQM*LIRFSC
Trigger: GCACGAGAACCGGATCAGCCACATCTGTACTGACAA...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGTGAGCAGCTGGTCGTaGGACAGGAGGTCTGCGTAC +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAVSSWS*DRRSAY
Trigger: GTACGCAGACCTCCTGTCCCACGACCAGCTGCTCAC...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCATTCTTGGAGACAAACTaGGAAGTGACTCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSFLETN*EVTPAS
Trigger: TGAGGCAGGAGTCACTTCCCAGTTTGTCTCCAAGAA...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCTTCTTGGAGACAAACTaGGAAGTGACTCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLFLETN*EVTPAS
Trigger: TGAGGCAGGAGTCACTTCCCAGTTTGTCTCCAAGAA...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGAGCTCTTCAGGGTCTTTaGCCCACTGGATTCATCACG +
Preference number: 4 (lower is better)
Translates to: ALNEALGSQVPRASWGPRALQGL*PTGFIT
Trigger: CGTGATGAATCCAGTGGGCCAAAGACCCTGAAGAGC...TCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCGTGCAGGGGCATTGGTaGCCCAAAGGGCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSVQGHW*PKGPHS
Trigger: GGAGTGGGGCCCTTTGGGCCACCAATGCCCCTGCAC...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAGTGCAGGGGCATTGGTaGCCCAAAGGGCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: VSQAVNSVGHTEARPFPEVQGHW*PKGPHS
Trigger: GGAGTGGGGCCCTTTGGGCCACCAATGCCCCTGCAC...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCAGGCTGTGGGCTGCTaGTCAGGGGACAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQQAVGC*SGDKVC
Trigger: GCAGACCTTGTCCCCTGACCAGCAGCCCACAGCCTG...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCCAGCGGGGAGTCCTTaGGCGGCTGGTCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: VARLVCVFLPASALGAKSPAGSP*AAGRSS
Trigger: GGAGCTACGACCAGCCGCCCAAGGACTCCCCGCTGG...AGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCCAGCGGGGAGTCCTTaGGCGGCTGGTCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVPAGSP*AAGRSS
Trigger: GGAGCTACGACCAGCCGCCCAAGGACTCCCCGCTGG...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACCAGCGGGGAGTCCTTaGGCGGCTGGTCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: ISTLKSALQFLSSEWRPQPAGSP*AAGRSS
Trigger: GGAGCTACGACCAGCCGCCCAAGGACTCCCCGCTGG...TTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAACTTCTTGGGTGATATaGGCGGCTGGCCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: AQALASLAQAEARSLHWRTSWVI*AAGREV
Trigger: CACCTCCCGGCCAGCCGCCCATATCACCCAAGAAGT...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTTGACTCCTGTGTCCTaGGAGGGAGACCCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPLTPVS*EGDPGL
Trigger: CAAACCGGGGTCTCCCTCCCAGGACACAGGAGTCAA...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGCCGCGATCAGCCTCCTaGGCTTTGGTGAGCACGATG +
Preference number: 4 (lower is better)
Translates to: KYQERAGDPDCLLPVWCAPRSAS*ALVSTM
Trigger: CATCGTGCTCACCAAAGCCCAGGAGGCTGATCGCGG...CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGCGGCCCTTGGAGTGCTaGAGGTGCAGCACCGCCGGG +
Preference number: 4 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPRPLEC*RCSTAG
Trigger: CCCGGCGGTGCTGCACCTCCAGCACTCCAAGGGCCG...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCGGTAGTCGCGGCCCTTaGAGTGCTGGAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLGSRGP*SAGGAA
Trigger: TGCTGCACCTCCAGCACTCCAAGGGCCGCGACTACC...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAGAGGGCTTCACTGCATaGCAGTCCTGCCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: AQALASLAQAEARSLHWREGFTA*QSCLEA
Trigger: GGCCTCTAGGCAGGACTGCCATGCAGTGAAGCCCTC...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTTTCACGCCGTTCCTCTaGGCTCCCGACTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAFTPFL*APDSVA
Trigger: TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAA...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTTTCCTTTCTTCAGAATaGCGCCCTCAACGAGGCACT +
Preference number: 4 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSFLSSE*RPQRGT
Trigger: AGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAA...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCACGATGGAATACATGTTaGGGGGCTTGGCTTAACTGT +
Preference number: 4 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSRWNTC*GAWLNC
Trigger: ACAGTTAAGCCAAGCCCCCCAACATGTATTCCATCG...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCTCCCTTCTCATGGAGCAGTTCCCAGGACCATCACTCGCATGTGTGCACATGCCGCAGCGCACCTGCATaGCAGTCCTGCCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SPFSWSSSQDHHSHVCTCRSAPA*QSCLEA
Trigger: GGCCTCTAGGCAGGACTGCCATGCAGGTGCGCTGCG...GCATGTGCACACATGCGAGTGATGGTCCTGGGAACTGCTCCATGAGAAGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR CCA 90 bp GCAATGCAGGGTCAGGGATGTGTGGGACAGGCAGACCTGGGTTCAAATCCTGACACACGAACCCACGTGTaGCGCAGCGCACCTGCATGG +
Preference number: 4 (lower is better)
Translates to: AMQGQGCVGQADLGSNPDTRTHV*RSAPAW
Trigger: CCATGCAGGTGCGCTGCGCCACACGTGGGTTCGTGT...GTCAGGATTTGAACCCAGGTCTGCCTGTCCCACACATCCCTGACCCTGCATTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR TCA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGGCCTCACCAGGAACCTaGGGACGTGGACGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPASPGT*GRGRRP
Trigger: GGGCCTCCGTCCACGTCCTCAGGTTCCTGGTGAGGC...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTGCCTCACCAGGAACCTaGGGACGTGGACGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSASPGT*GRGRRP
Trigger: GGGCCTCCGTCCACGTCCTCAGGTTCCTGGTGAGGC...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGCTTGCAGGGAGTGTTTaGGGATCTCCAGCCACTCCT +
Preference number: 4 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPLAGSV*GSPATP
Trigger: AGGAGTGGCTGGAGATCCTCAAACACTCCCTGCAAG...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTTCCCTCGTCTTGCCCTaGGAGGTCTGCAGCTTGATC +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERASLVLP*EVCSLI
Trigger: GATCAAGCTGCAGACCTCTCAGGGCAAGACGAGGGA...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGACAGAGGATGAGCACGTaGAGGAGCGCAGCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGQRMST*RSAAGA
Trigger: CGCCCCGGCTGCGCTCCTTCACGTGCTCATCCTCTG...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGGCCCTCGGCAGAGGATaGGCACGTGAAGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LAQAEARSLHWRIGADFLALGRG*AREGAQ
Trigger: CTGCGCTCCTTCACGTGCTCATCCTCTGCCGAGGGC...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGCCGGGGCCTGGGAGCTaGCCGGGGTCTTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: WRIGADFLLLPTKELRSQPGPGS*PGSWAS
Trigger: GGAAGCCCAAGACCCCGGTCAGCTCCCAGGCCCCGG...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGCGGGGTCTGCTGGTTaGTTTCCGATCTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAAGSAG*FPIWKA
Trigger: AGCCTTCCAGATCGGAAATCAACCAGCAGACCCCGC...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCGGCCGGTGCTTGCCGTaGTGCGGGAGCTCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GMWGAFPSAFTHTTGFSSGRCLP*CGSSVL
Trigger: CAACACCGAGCTCCCGCATCACGGCAAGCACCGGCC...GGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTTCAGTGGCAGCTCACTaGGGGCTTCACTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERASVAAH*GLHCMA
Trigger: TGCCATGCAGTGAAGCCCTCAGTGAGCTGCCACTGA...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTACACCCTGCCACGGCTaGCGCGGCTCTCTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSTPCHG*RGSLAS
Trigger: GCTGGCAAGAGAGCCGCGGCAGCCGTGGCAGGGTGT...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR GCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCATAAGGGAGGGCCGGTaGGGAGACTCAGGACCCTCG +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSIREGR*GDSGPS
Trigger: CGAGGGTCCTGAGTCTCCGCACCGGCCCTCCCTTAT...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCACACTGGTGATTTCTTaGAGGGAGTGTTTGAGGATC +
Preference number: 4 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLTLVIS*RECLRI
Trigger: GATCCTCAAACACTCCCTGCAAGAAATCACCAGTGT...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCACCAGTGTGTTTGCAATaGCTGTCTTCACGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVAPVCLQ*LSSRCQ
Trigger: CTGACAACGTGAAGACAGGCATTGCAAACACACTGG...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGAAGGAGGTCTGCGTACTaGTGCTGCTTGATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: ALNEALGSQVPRASWGPRRRSAY*CCLIFW
Trigger: CCAGAAAATCAAGCAGCAGCAGTACGCAGACCTCCT...TCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAATGCTGATGAGGATGTaGTGGTCTAGCAGGTACTCA +
Preference number: 4 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVAMLMRM*WSSRYS
Trigger: TGAGTACCTGCTAGACCAGCACATCCTCATCAGCAT...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAAAGGTCTGCTTCACGTaGAGGGGCATTGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: AQALASLAQAEARSLHWRKVCFT*RGIGGP
Trigger: TGGGCCACCAATGCCCCTGCACGTGAAGCAGACCTT...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCCTCCAGGCTGTGGGCTaGTGGTCAGGGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSLQAVG*WSGDKV
Trigger: GACCTTGTCCCCTGACCAGCAGCCCACAGCCTGGAG...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTAGGCAGCGTGTCCCCTaGGTTCTTCCCCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: PRASWGPRLFVARLVCVFRQRVP*VLPQVT
Trigger: AGTGACCTGGGGAAGAACGCAGGGGACACGCTGCCT...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGATGCTGGGCGACAAGATaGCGGGTTCCGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGCWATR*RVPGRA
Trigger: CGCCCTGCCCGGAACCCGGCATCTTGTCGCCCAGCA...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGATGCTGGGCGACAAGATaGCGGGTTCCGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: VGHTEARPFPENTKPCIGCWATR*RVPGRA
Trigger: CGCCCTGCCCGGAACCCGGCATCTTGTCGCCCAGCA...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCGGGGTGGGCGGGGTCTaGTGGTTGATTTCCGATCTG +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLGVGGV*WLISDL
Trigger: CAGATCGGAAATCAACCAGCAGACCCCGCCCACCCC...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGGGGGTGGGCGGGGTCTaGTGGTTGATTTCCGATCTG +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQGVGGV*WLISDL
Trigger: CAGATCGGAAATCAACCAGCAGACCCCGCCCACCCC...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTTCGCGGCCCTTGGAGTaGTGGAGGTGCAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSSRPLE*WRCSTA
Trigger: GGCGGTGCTGCACCTCCAGCACTCCAAGGGCCGCGA...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTCTTCCTTTTAACAACTGCTGCAGAGGCAATGCAGGGTCAGGGATGTGTGGGACCTCCGGCCGGTGCTTaGCGTGATGCGGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: FFLLTTAAEAMQGQGCVGPPAGA*RDAGAR
Trigger: CCGAGCTCCCGCATCACGGCAAGCACCGGCCGGAGG...TCCCACACATCCCTGACCCTGCATTGCCTCTGCAGCAGTTGTTAAAAGGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR CCA 90 bp CAGGAGGGCACTGGGCTTCTTAATGCTTTCACCCCTCCGAACACACACCGTTTTCCCGTTGCCTCTTGGTaGCCTCGGCTGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: QEGTGLLNAFTPPNTHRFPVASW*PRLLPP
Trigger: TGGTGGCAGCAGCCGAGGCCACCAAGAGGCAACGGG...AAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAGAAGCCCAGTGCCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCCGCCCGTTGCCTCTTaGTGGCCTCGGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSPPVAS*WPRLLP
Trigger: TGGCAGCAGCCGAGGCCACCAAGAGGCAACGGGCGG...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATCCAGCAGGGGACCATaGTGGGCGTGGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGSSRGP*WAWASS
Trigger: CGAGGAGGCCCACGCCCACCATGGTCCCCTGCTGGA...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGACGGGTGATGTTGCCATaGTTCCAGCAGGGGACCATG +
Preference number: 4 (lower is better)
Translates to: AQALASLAQAEARSLHWRRVMLP*FQQGTM
Trigger: CATGGTCCCCTGCTGGAACCATGGCAACATCACCCG...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTCAGCGGGATGTTTCTTaGGGGCAGCTCGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFQRDVS*GQLGWR
Trigger: TCTCCACCCGAGCTGCCCCCAAGAAACATCCCGCTG...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCAGCGGGATGTTTCTTaGGGGCAGCTCGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQQRDVS*GQLGWR
Trigger: TCTCCACCCGAGCTGCCCCCAAGAAACATCCCGCTG...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGACACCTCAAAGGTGACTaGAGGGATAAGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: AQALASLAQAEARSLHWRHLKGD*RDKGGP
Trigger: CGGCCCTCCCTTATCCCTCCAGTCACCTTTGAGGTG...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTCACCTCAAAGGTGACTaGAGGGATAAGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAHLKGD*RDKGGP
Trigger: CGGCCCTCCCTTATCCCTCCAGTCACCTTTGAGGTG...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGTCTCGTGCTCAGGCTTaGCCAGCACCACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQSRAQA*PAPRCG
Trigger: TCCGCATCGTGGTGCTGGCCAAGCCTGAGCACGAGA...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAGTGCAGGGGCATTGGTaGCCCAAAGGGCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTVQGHW*PKGPHS
Trigger: GGAGTGGGGCCCTTTGGGCCACCAATGCCCCTGCAC...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGGTGCAGGGGCATTGGTaGCCCAAAGGGCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVVQGHW*PKGPHS
Trigger: GGAGTGGGGCCCTTTGGGCCACCAATGCCCCTGCAC...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCACGTGCAGGGGCATTaGTGGCCCAAAGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVHVQGH*WPKGPH
Trigger: GTGGGGCCCTTTGGGCCACCAATGCCCCTGCACGTG...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTCCAGCGGGGAGTCCTTaGGCGGCTGGTCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPPAGSP*AAGRSS
Trigger: GGAGCTACGACCAGCCGCCCAAGGACTCCCCGCTGG...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCCAGCGGGGAGTCCTTaGGCGGCTGGTCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSPAGSP*AAGRSS
Trigger: GGAGCTACGACCAGCCGCCCAAGGACTCCCCGCTGG...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCACTTCTTGGGTGATATaGGCGGCTGGCCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLTSWVI*AAGREV
Trigger: CACCTCCCGGCCAGCCGCCCATATCACCCAAGAAGT...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGACTTCTTGGGTGATATaGGCGGCTGGCCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQTSWVI*AAGREV
Trigger: CACCTCCCGGCCAGCCGCCCATATCACCCAAGAAGT...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCACTTCTTGGGTGATATaGGCGGCTGGCCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTTSWVI*AAGREV
Trigger: CACCTCCCGGCCAGCCGCCCATATCACCCAAGAAGT...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTCTTCCCCAGGTCACTaGGCCTTGACTCCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: KYQERAGDPDCLLPVWCASSPGH*ALTPVS
Trigger: GGACACAGGAGTCAAGGCCCAGTGACCTGGGGAAGA...CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTTCTTCCCCAGGTCACTaGGCCTTGACTCCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERASSPGH*ALTPVS
Trigger: GGACACAGGAGTCAAGGCCCAGTGACCTGGGGAAGA...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCCCGCGATCAGCCTCCTaGGCTTTGGTGAGCACGATG +
Preference number: 4 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTPRSAS*ALVSTM
Trigger: CATCGTGCTCACCAAAGCCCAGGAGGCTGATCGCGG...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAGTCTTGGGCTTCCCTTaGCTCTTGTCCCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTVLGFP*LLSPPA
Trigger: GGCCGGCGGGGACAAGAGCCAAGGGAAGCCCAAGAC...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCGCCGGCACCGGGGCCTaGGAGCTGACCGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPAGTGA*ELTGVL
Trigger: CAAGACCCCGGTCAGCTCCCAGGCCCCGGTGCCGGC...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATACGGCCCTTGGAGTGCTaGAGGTGCAGCACCGCCGGG +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCIRPLEC*RCSTAG
Trigger: CCCGGCGGTGCTGCACCTCCAGCACTCCAAGGGCCG...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTGAGGGCTTCACTGCATaGCAGTCCTGCCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PRASWGPRLFVARLVCVFEGFTA*QSCLEA
Trigger: GGCCTCTAGGCAGGACTGCCATGCAGTGAAGCCCTC...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACCTTGCATAGGAAGCTaGGCAGGAGGAGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PSNRRCSSFLQNGALNEAPCIGS*AGGASR
Trigger: CCTGCTGGCTCCTCCTGCCCAGCTTCCTATGCAAGG...TGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTCCCTCAACGAGGCACTaGGGTCCCAAGTACCAAGAG +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAPSTRH*GPKYQE
Trigger: CTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGG...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCATTAAACTGGTGGGTTTaGGCACGTGGTTTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVALNWWV*ARGFRW
Trigger: CCACCTAAAACCACGTGCCCAAACCCACCAGTTTAA...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGTTAAACTGGTGGGTTTaGGCACGTGGTTTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQLNWWV*ARGFRW
Trigger: CCACCTAAAACCACGTGCCCAAACCCACCAGTTTAA...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGGCCAGATCTCTCCACTaGAGAATAGGAGCTGATTTC +
Preference number: 4 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQARSLH*RIGADF
Trigger: GAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGC...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACACCCTGGCAGCCAGGCTaGAGAGCACGGCTTTCGGGA +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTPWQPG*RARLSG
Trigger: TCCCGAAAGCCGTGCTCTCCAGCCTGGCTGCCAGGG...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCATGGAGCAGTTCCCAGGACCATCACTCGCATGTGTGCACATGCATGCGTTCACGCAGCGCACCTGCATaGCAGTCCTGCCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SWSSSQDHHSHVCTCMRSRSAPA*QSCLEA
Trigger: GGCCTCTAGGCAGGACTGCCATGCAGGTGCGCTGCG...TGAACGCATGCATGTGCACACATGCGAGTGATGGTCCTGGGAACTGCTCCATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR TCA 90 bp GGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCCTTCTGCGGCCGTGCTaGCACCCACGTGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: GHTEARPFPENTKPCIGSLLRPC*HPRGMP
Trigger: TGGCATCCCACGTGGGTGTCAGCACGGCCGCAGAAG...GCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR TCA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCCGGATGCCTGAACAGTaGATTTATCATCTTCATTGG +
Preference number: 4 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLRMPEQ*IYHLHW
Trigger: CCAATGAAGATGATAAATTCACTGTTCAGGCATCCG...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCAGCTGGTCCAGCTTGGTaGAGAACCTCATGGAGACGC +
Preference number: 4 (lower is better)
Translates to: PSNRRCSSFLQNGALNEAAGPAW*RTSWRR
Trigger: GCGTCTCCATGAGGTTCTTCACCAAGCTGGACCAGC...TGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTGTGGTCACTCGTCATaGTGTCGCTGGTACTGCCAT +
Preference number: 4 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPCGHSS*CRWYCH
Trigger: ATGGCAGTACCAGCGACATCATGACGAGTGACCACA...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGATGTGGCATAGCACCTaGGAAACTCAATCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQMWHST*ETQSVL
Trigger: AAGGACAGATTGAGTTTCTCAGGTGCTATGCCACAT...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCACTCCCCATGGTGGGTaGGAGGCGTGTAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSTPHGG*EACRWA
Trigger: TGCCCATCTACACGCCTCTCACCCACCATGGGGAGT...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTTCCCTCGTCTTGCCCTaGGAGGTCTGCAGCTTGATC +
Preference number: 4 (lower is better)
Translates to: PRASWGPRLFVARLVCVFSLVLP*EVCSLI
Trigger: GATCAAGCTGCAGACCTCTCAGGGCAAGACGAGGGA...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCAGCGGCAGGTCCTCCTaGGGCAGCGTGTCCCCTGCG +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPSGRSS*GSVSPA
Trigger: CGCAGGGGACACGCTGCCTCAGGAGGACCTGCCGCT...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACCTCCTGGGCTTTGGTaGGCACGATGCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: ISTLKSALQFLSSEWRPQPPGLW*ARCWAT
Trigger: TGTCGCCCAGCATCGTGCTCACCAAAGCCCAGGAGG...TTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCCTCCTGGGCTTTGGTaGGCACGATGCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVPPGLW*ARCWAT
Trigger: TGTCGCCCAGCATCGTGCTCACCAAAGCCCAGGAGG...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCGCCCTCGGCAGAGGATaGGCACGTGAAGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: GHTEARPFPENTKPCIGSALGRG*AREGAQ
Trigger: CTGCGCTCCTTCACGTGCTCATCCTCTGCCGAGGGC...GCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTGCGGGGTCTGCTGGTTaGTTTCCGATCTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PRASWGPRLFVARLVCVFAGSAG*FPIWKA
Trigger: AGCCTTCCAGATCGGAAATCAACCAGCAGACCCCGC...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCATCAGTGGCAGCTCACTaGGGGCTTCACTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: PSNRRCSSFLQNGALNEASVAAH*GLHCMA
Trigger: TGCCATGCAGTGAAGCCCTCAGTGAGCTGCCACTGA...TGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCCTTAACTGTGGCTGGTaGTGGCTGCCCACCTCGAGG +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSLNCGW*WLPTSR
Trigger: CCTCGAGGTGGGCAGCCATCACCAGCCACAGTTAAG...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCAACCTGCCGCCCGTTaGCTCTTGGTGGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSQPAAR*LLVASA
Trigger: AGCCGAGGCCACCAAGAGGCAACGGGCGGCAGGTTG...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGCCCTCCACTGCAACCTaGCGCCCGTTGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LAQAEARSLHWRIGADFLPSTAT*RPLPLG
Trigger: ACCAAGAGGCAACGGGCGGCAGGTTGCAGTGGAGGG...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGAGGCCCGGGGAGAGCTaGTGGTCAAATAACCTCTGC +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQRPGES*WSNNLC
Trigger: GCAGAGGTTATTTGACCAGCAGCTCTCCCCGGGCCT...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTATAAGGGAGGGCCGGTaGGGAGACTCAGGACCCTCG +
Preference number: 4 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTIREGR*GDSGPS
Trigger: CGAGGGTCCTGAGTCTCCGCACCGGCCCTCCCTTAT...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCATCCCGCGTCTTTCCCTaGCCCTTGGAGAGAAACCAG +
Preference number: 4 (lower is better)
Translates to: PSNRRCSSFLQNGALNEASRVFP*PLERNQ
Trigger: CTGGTTTCTCTCCAAGGGGCAGGGAAAGACGCGGGA...TGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCTGGCCAGCACCACGATaGGGATGTTCCAGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTWPAPR*GCSRAC
Trigger: ACACGCTCTGGAACATCCGCATCGTGGTGCTGGCCA...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTGGCCAGCACCACGATaGGGATGTTCCAGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFWPAPR*GCSRAC
Trigger: ACACGCTCTGGAACATCCGCATCGTGGTGCTGGCCA...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGAGTTCCCCAGTGTGTTTaGAATGCCTGTCTTCACGTT +
Preference number: 4 (lower is better)
Translates to: ALNEALGSQVPRASWGPRVPQCV*NACLHV
Trigger: AACGTGAAGACAGGCATTGCAAACACACTGGGGAAC...TCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAAGGTCTGCTTCACGTaGAGGGGCATTGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLKVCFT*RGIGGP
Trigger: TGGGCCACCAATGCCCCTGCACGTGAAGCAGACCTT...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTAAGGTCTGCTTCACGTaGAGGGGCATTGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PRASWGPRLFVARLVCVFKVCFT*RGIGGP
Trigger: TGGGCCACCAATGCCCCTGCACGTGAAGCAGACCTT...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGAAGGTCTGCTTCACGTaGAGGGGCATTGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQKVCFT*RGIGGP
Trigger: TGGGCCACCAATGCCCCTGCACGTGAAGCAGACCTT...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGATCAGGGGACAAGGTCTaGTTCACGTGCAGGGGCATT +
Preference number: 4 (lower is better)
Translates to: AQALASLAQAEARSLHWRSGDKV*FTCRGI
Trigger: AATGCCCCTGCACGTGAAGCAGACCTTGTCCCCTGA...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACTCCAGGCTGTGGGCTaGTGGTCAGGGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: ISTLKSALQFLSSEWRPQLQAVG*WSGDKV
Trigger: GACCTTGTCCCCTGACCAGCAGCCCACAGCCTGGAG...TTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTCTCCAGGCTGTGGGCTaGTGGTCAGGGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTLQAVG*WSGDKV
Trigger: GACCTTGTCCCCTGACCAGCAGCCCACAGCCTGGAG...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTCCAGGCTGTGGGCTaGTGGTCAGGGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVLQAVG*WSGDKV
Trigger: GACCTTGTCCCCTGACCAGCAGCCCACAGCCTGGAG...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CGAACACACACCGTTTTAAACTGGTGGGTTTGGGCACGTGGTTTTAGGTGGCTATGCTGGGCGACAAGATaGCGGGTTCCGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RTHTVLNWWVWARGFRWLCWATR*RVPGRA
Trigger: CGCCCTGCCCGGAACCCGGCATCTTGTCGCCCAGCA...TAGCCACCTAAAACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGACTGCATGGCAGTCCTaGCTAGAGGCCCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVTAWQS*LEALVA
Trigger: GGCCACCAGGGCCTCTAGGCAGGACTGCCATGCAGT...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGGAGGCCCAGGCAGGCAGATCACCTGGCGAAACTCAGTTGCAAAACAAATTTACCTGCATGGCAGTCCTaGCTAGAGGCCCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GRPRQADHLAKLSCKTNLPAWQS*LEALVA
Trigger: GGCCACCAGGGCCTCTAGGCAGGACTGCCATGCAGG...TAAATTTGTTTTGCAACTGAGTTTCGCCAGGTGATCTGCCTGCCTGGGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR CCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCCAGCCCTCTCCTTCCTaGCAACTGGTCGCAGCGTAC +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSQPSPS*QLVAAY
Trigger: GTACGCTGCGACCAGTTGCCAGGAAGGAGAGGGCTG...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CCA 90 bp GGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCCCCGTTGCCTCTTGGTaGCCTCGGCTGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: GHTEARPFPENTKPCIGSPVASW*PRLLPP
Trigger: TGGTGGCAGCAGCCGAGGCCACCAAGAGGCAACGGG...GCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTCGGGTGATGTTGCCATaGTTCCAGCAGGGGACCATG +
Preference number: 4 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFRVMLP*FQQGTM
Trigger: CATGGTCCCCTGCTGGAACCATGGCAACATCACCCG...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCCGTCCTTGCCTGTCCTaGAAAGCAGCTCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSRPCLS*KAAPPP
Trigger: AGGCGGAGGAGCTGCTTTCCAGGACAGGCAAGGACG...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGAGGAACCTGAGGACGTaGACGGAGGCCCGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPRNLRT*TEARGE
Trigger: CTCTCCCCGGGCCTCCGTCCACGTCCTCAGGTTCCT...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCCACCTCAAAGGTGACTaGAGGGATAAGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLHLKGD*RDKGGP
Trigger: CGGCCCTCCCTTATCCCTCCAGTCACCTTTGAGGTG...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTCTCGTGCTCAGGCTTaGCCAGCACCACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSSRAQA*PAPRCG
Trigger: TCCGCATCGTGGTGCTGGCCAAGCCTGAGCACGAGA...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAGTGAGCAGCTGGTCGTaGGACAGGAGGTCTGCGTAC +
Preference number: 4 (lower is better)
Translates to: VSQAVNSVGHTEARPFPEVSSWS*DRRSAY
Trigger: GTACGCAGACCTCCTGTCCCACGACCAGCTGCTCAC...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGATTTGGTCTGGGACTTaGTCTTCAATGTGGCATAGC +
Preference number: 4 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQIWSGT*SSMWHS
Trigger: GCTATGCCACATTGAAGACCAAGTCCCAGACCAAAT...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGCAGCTGCGTTTCTGTaGCCTCTAACCGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAAAAFL*PLTEGQ
Trigger: TTGCCCTTCGGTTAGAGGCCACAGAAACGCAGCTGC...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGGCTCTTCAGGGTCTTTaGCCCACTGGATTCATCACG +
Preference number: 4 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPALQGL*PTGFIT
Trigger: CGTGATGAATCCAGTGGGCCAAAGACCCTGAAGAGC...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTGCTTCATGGGGTCGTaGCTGGTGAGGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFCFMGS*LVRLFR
Trigger: CCTGAAGAGCCTCACCAGCCACGACCCCATGAAGCA...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGAGTGCAGGGGCATTGGTaGCCCAAAGGGCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGVQGHW*PKGPHS
Trigger: GGAGTGGGGCCCTTTGGGCCACCAATGCCCCTGCAC...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTCAGGCTGTGGGCTGCTaGTCAGGGGACAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTQAVGC*SGDKVC
Trigger: GCAGACCTTGTCCCCTGACCAGCAGCCCACAGCCTG...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCAGGCTGTGGGCTGCTaGTCAGGGGACAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: VARLVCVFLPASALGAKSQAVGC*SGDKVC
Trigger: GCAGACCTTGTCCCCTGACCAGCAGCCCACAGCCTG...AGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCAGGCTGTGGGCTGCTaGTCAGGGGACAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVQAVGC*SGDKVC
Trigger: GCAGACCTTGTCCCCTGACCAGCAGCCCACAGCCTG...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGCAGGCTGTGGGCTGCTaGTCAGGGGACAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWQAVGC*SGDKVC
Trigger: GCAGACCTTGTCCCCTGACCAGCAGCCCACAGCCTG...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTGGTGATATGGGCGGCTaGCCGGGAGGTGTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPGDMGG*PGGVGG
Trigger: TCCTCCGACACCTCCCGGCCAGCCGCCCATATCACC...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGAGGTGATATGGGCGGCTaGCCGGGAGGTGTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGGDMGG*PGGVGG
Trigger: TCCTCCGACACCTCCCGGCCAGCCGCCCATATCACC...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAACTTCTTGGGTGATATaGGCGGCTGGCCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VSQAVNSVGHTEARPFPETSWVI*AAGREV
Trigger: CACCTCCCGGCCAGCCGCCCATATCACCCAAGAAGT...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGTTGACTCCTGTGTCCTaGGAGGGAGACCCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQLTPVS*EGDPGL
Trigger: CAAACCGGGGTCTCCCTCCCAGGACACAGGAGTCAA...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTATTTTGGGGGATTCCTaGTCCTTCCTGGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAILGDS*SFLGAG
Trigger: GCCTGCTCCCAGGAAGGACCAGGAATCCCCCAAAAT...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCCCGCGATCAGCCTCCTaGGCTTTGGTGAGCACGATG +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSPRSAS*ALVSTM
Trigger: CATCGTGCTCACCAAAGCCCAGGAGGCTGATCGCGG...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTGTCTTGGGCTTCCCTTaGCTCTTGTCCCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSVLGFP*LLSPPA
Trigger: GGCCGGCGGGGACAAGAGCCAAGGGAAGCCCAAGAC...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGGGTAGTCGCGGCCCTTaGAGTGCTGGAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVGSRGP*SAGGAA
Trigger: TGCTGCACCTCCAGCACTCCAAGGGCCGCGACTACC...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGGGTAGTCGCGGCCCTTaGAGTGCTGGAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWGSRGP*SAGGAA
Trigger: TGCTGCACCTCCAGCACTCCAAGGGCCGCGACTACC...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTTCACGCCGTTCCTCTaGGCTCCCGACTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSFTPFL*APDSVA
Trigger: TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAA...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTCGGGAGAGGGTCCAGTaGCTTCACGCCGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PRLFVARLVCVFLPASALRERVQ*LHAVPL
Trigger: CAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCG...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGCGCAGACTTCCATCATaGGAATGTGGGGTGCATTCC +
Preference number: 4 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPRRLPS*ECGVHS
Trigger: GGAATGCACCCCACATTCCCATGATGGAAGTCTGCG...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGTGGGGGCAGCTCGGGTaGAGACACGACACTTTCTAC +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQWGQLG*RHDTFY
Trigger: GTAGAAAGTGTCGTGTCTCCACCCGAGCTGCCCCCA...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000445964.6
ENST00000630854.3
CDS-3UTR TCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTTCCCCCTGGGTGGAATaGCCGGCTCTGGAGACGTCA +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGSPWVE*PALETS
Trigger: TGACGTCTCCAGAGCCGGTCATTCCACCCAGGGGGA...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR TCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCCAGTACAGATGTGGCTaGTCCGGTTCTCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLQYRCG*SGSRAQ
Trigger: CTGAGCACGAGAACCGGATCAGCCACATCTGTACTG...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCAGTACAGATGTGGCTaGTCCGGTTCTCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQQYRCG*SGSRAQ
Trigger: CTGAGCACGAGAACCGGATCAGCCACATCTGTACTG...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGGAGAGGTCTGCAGCTTaGTCTCCCCCTGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: LAQAEARSLHWRIGADFLERSAA*SPPGSG
Trigger: GCCACTTCCAGGGGGAGATCAAGCTGCAGACCTCTC...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGGAGAGGTCTGCAGCTTaGTCTCCCCCTGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWERSAA*SPPGSG
Trigger: GCCACTTCCAGGGGGAGATCAAGCTGCAGACCTCTC...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAGAGAGGTCTGCAGCTTaGTCTCCCCCTGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTERSAA*SPPGSG
Trigger: GCCACTTCCAGGGGGAGATCAAGCTGCAGACCTCTC...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTCAGGTCACTGGGCCTTaGCTCCTGTGTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGQVTGP*LLCPGR
Trigger: CCTCCCAGGACACAGGAGTCAAGGCCCAGTGACCTG...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGCAGGTCACTGGGCCTTaGCTCCTGTGTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPQVTGP*LLCPGR
Trigger: CCTCCCAGGACACAGGAGTCAAGGCCCAGTGACCTG...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGACCTCCTGGGCTTTGGTaGGCACGATGCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGPPGLW*ARCWAT
Trigger: TGTCGCCCAGCATCGTGCTCACCAAAGCCCAGGAGG...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CACTGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGAGGATGAGCACGTaGAGGAGCGCAGCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: HWRIGADFLLLPTKELRSQRMST*RSAAGA
Trigger: CGCCCCGGCTGCGCTCCTTCACGTGCTCATCCTCTG...GCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTCCGATCTGGAAGGCTTaGTGGGCCTCTTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGPIWKA*WASWPA
Trigger: TGCCGGCCAAGAGGCCCATCAAGCCTTCCAGATCGG...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTCAGTGGCAGCTCACTaGGGGCTTCACTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSSVAAH*GLHCMA
Trigger: TGCCATGCAGTGAAGCCCTCAGTGAGCTGCCACTGA...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAAGCAGCTTGTGTCACTaGAGCTGGACAGAACAGGCT +
Preference number: 4 (lower is better)
Translates to: AQALASLAQAEARSLHWRSSLCH*SWTEQA
Trigger: AGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCT...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTAGCAGCTTGTGTCACTaGAGCTGGACAGAACAGGCT +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERASSLCH*SWTEQA
Trigger: AGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCT...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCTTAACTGTGGCTGGTaGTGGCTGCCCACCTCGAGG +
Preference number: 4 (lower is better)
Translates to: VARLVCVFLPASALGAKSLNCGW*WLPTSR
Trigger: CCTCGAGGTGGGCAGCCATCACCAGCCACAGTTAAG...AGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGCTTAACTGTGGCTGGTaGTGGCTGCCCACCTCGAGG +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWLNCGW*WLPTSR
Trigger: CCTCGAGGTGGGCAGCCATCACCAGCCACAGTTAAG...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAACTGAGGGCTTCACTTaGCTCCTGTGTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VSQAVNSVGHTEARPFPETEGFT*LLCPGR
Trigger: CCTCCCAGGACACAGGAGTCAAGTGAAGCCCTCAGT...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417661.1
ENST00000628842.1
CDS-3UTR GCA 90 bp CACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGCAACCTGCCGCCCGTTaGCTCTTGGTGGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: HTEARPFPENTKPCIGSWQPAAR*LLVASA
Trigger: AGCCGAGGCCACCAAGAGGCAACGGGCGGCAGGTTG...CCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGACCCTCCACTGCAACCTaGCGCCCGTTGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGPSTAT*RPLPLG
Trigger: ACCAAGAGGCAACGGGCGGCAGGTTGCAGTGGAGGG...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCCACGCAGAGCGCGTATaGCCGGGAGATGGACTCGCT +
Preference number: 4 (lower is better)
Translates to: GHTEARPFPENTKPCIGSHAERV*PGDGLA
Trigger: AGCGAGTCCATCTCCCGGGCATACGCGCTCTGCGTG...GCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCGCCCACTGGTGTCCATaGTTTGCAGTCGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTAHWCP*FAVAGT
Trigger: TGTTCCAGCGACTGCAAAGCATGGACACCAGTGGGC...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAATCCCGCGTCTTTCCCTaGCCCTTGGAGAGAAACCAG +
Preference number: 4 (lower is better)
Translates to: VSQAVNSVGHTEARPFPESRVFP*PLERNQ
Trigger: CTGGTTTCTCTCCAAGGGGCAGGGAAAGACGCGGGA...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGGTGGGACAGGAGGTCTaGGTACTGCTGCTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQVGQEV*VLLLLD
Trigger: ATCAAGCAGCAGCAGTACGCAGACCTCCTGTCCCAC...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGACTAACCGAAGGGCAATaGAGCCCTCGCCATAGGATT +
Preference number: 4 (lower is better)
Translates to: AQALASLAQAEARSLHWRLTEGQ*SPRHRI
Trigger: AATCCTATGGCGAGGGCTGCATTGCCCTTCGGTTAG...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTCTAACCGAAGGGCAATaGAGCCCTCGCCATAGGATT +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERALTEGQ*SPRHRI
Trigger: AATCCTATGGCGAGGGCTGCATTGCCCTTCGGTTAG...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTCTCCAGGCTGTGGGCTaGTGGTCAGGGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPLQAVG*WSGDKV
Trigger: GACCTTGTCCCCTGACCAGCAGCCCACAGCCTGGAG...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGTGCTGGGCGACAAGATaGCGGGTTCCGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: WRIGADFLLLPTKELRSQCWATR*RVPGRA
Trigger: CGCCCTGCCCGGAACCCGGCATCTTGTCGCCCAGCA...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGGGGGTGGGCGGGGTCTaGTGGTTGATTTCCGATCTG +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVGVGGV*WLISDL
Trigger: CAGATCGGAAATCAACCAGCAGACCCCGCCCACCCC...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTTTGGAGTGCTGGAGGTaGAGCACCGCCGGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGLECWR*STAGLL
Trigger: CAAGAGCCCGGCGGTGCTGCACCTCCAGCACTCCAA...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTGGAGTGCTGGAGGTaGAGCACCGCCGGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGLECWR*STAGLL
Trigger: CAAGAGCCCGGCGGTGCTGCACCTCCAGCACTCCAA...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCACTGCATGGCAGTCCTaGCTAGAGGCCCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GHTEARPFPENTKPCIGSTAWQS*LEALVA
Trigger: GGCCACCAGGGCCTCTAGGCAGGACTGCCATGCAGT...GCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAGTTGCCCGTCTGGTGTaGGTTTTTCTTCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: AQALASLAQAEARSLHWRVARLV*VFLPAS
Trigger: TGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGTTGCCCGTCTGGTGTaGGTTTTTCTTCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAVARLV*VFLPAS
Trigger: TGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGATAGGAAGAAAAGGCTaGACTATTTCAAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQIGRKG*TISRAW
Trigger: CCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTAT...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAGGGTGCATTCCCTTCTaGATTCACACACACCACTGG +
Preference number: 4 (lower is better)
Translates to: AQALASLAQAEARSLHWRGCIPF*IHTHHW
Trigger: CCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCC...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTGGGAGGCCCAGGCAGGCAGATCACCTGGCGAAACTCAGTTGCAAAACAAATTGTGGCGCAGCGCACCTaGATGGCAGTCCTGCCTAGA +
Preference number: 4 (lower is better)
Translates to: LGGPGRQITWRNSVAKQIVAQRT*MAVLPR
Trigger: TCTAGGCAGGACTGCCATGCAGGTGCGCTGCGCCAC...AATTTGTTTTGCAACTGAGTTTCGCCAGGTGATCTGCCTGCCTGGGCCTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR GCA 90 bp TCTCCCTTCTCATGGAGCAGTTCCCAGGACCATCACTCGCATGTGTGCACATGCCTGCTGCAGAGGCAATaGAGGGTCAGGGATGTGTGG +
Preference number: 4 (lower is better)
Translates to: SPFSWSSSQDHHSHVCTCLLQRQ*RVRDVW
Trigger: CCACACATCCCTGACCCTGCATTGCCTCTGCAGCAG...GCATGTGCACACATGCGAGTGATGGTCCTGGGAACTGCTCCATGAGAAGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR CCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAGGTGGGCCAGAGAAGTaGTTCTTCTGCGGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTGGPEK*FFCGRA
Trigger: AGCACGGCCGCAGAAGAACCACTTCTCTGGCCCACC...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCCGCCCGTTGCCTCTTaGTGGCCTCGGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSPPVAS*WPRLLP
Trigger: TGGCAGCAGCCGAGGCCACCAAGAGGCAACGGGCGG...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGAGGGAGATGGACTCGCTaGCACGCACGAGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGGRWTR*HARGSS
Trigger: GGAGCTTCCTCGTGCGTGCCAGCGAGTCCATCTCCC...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCCGTATGCCCGGGAGATaGACTCGCTGGCACGCACGA +
Preference number: 4 (lower is better)
Translates to: GHTEARPFPENTKPCIGSRMPGR*TRWHAR
Trigger: TCGTGCGTGCCAGCGAGTCCATCTCCCGGGCATACG...GCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACACAGCGGGATGTTTCTTaGGGGCAGCTCGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTQRDVS*GQLGWR
Trigger: TCTCCACCCGAGCTGCCCCCAAGAAACATCCCGCTG...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGAGAGGCTCGGCCGGCTaGTCTCGGTCGCTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRRGSAG*SRSLGD
Trigger: ATCCCCGAGCGACCGAGACCAGCCGGCCGAGCCTCT...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGGTGAGCAGCTGGTCGTaGGACAGGAGGTCTGCGTAC +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWVSSWS*DRRSAY
Trigger: GTACGCAGACCTCCTGTCCCACGACCAGCTGCTCAC...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAAATGGGCTTCAGCTTTaGAAGAGTCTCACCAAACTT +
Preference number: 4 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVANGLQL*KSLTKL
Trigger: AAGTTTGGTGAGACTCTTCCAAAGCTGAAGCCCATT...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGGCAGCTGCGTTTCTGTaGCCTCTAACCGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQAAAFL*PLTEGQ
Trigger: TTGCCCTTCGGTTAGAGGCCACAGAAACGCAGCTGC...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCAAGCTTGATCTCCCCCTaGAAGTGGCCTGTCAACTCC +
Preference number: 4 (lower is better)
Translates to: PSNRRCSSFLQNGALNEASLISP*KWPVNS
Trigger: GGAGTTGACAGGCCACTTCCAGGGGGAGATCAAGCT...TGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTAGCTTGATCTCCCCCTaGAAGTGGCCTGTCAACTCC +
Preference number: 4 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFSLISP*KWPVNS
Trigger: GGAGTTGACAGGCCACTTCCAGGGGGAGATCAAGCT...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCAGGGTCTTTGGCCCACTaGATTCATCACGCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: PSNRRCSSFLQNGALNEAGSLAH*IHHAPS
Trigger: AGACGGAGCGTGATGAATCCAGTGGGCCAAAGACCC...TGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGACAGGCTGTGGGCTGCTaGTCAGGGGACAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGQAVGC*SGDKVC
Trigger: GCAGACCTTGTCCCCTGACCAGCAGCCCACAGCCTG...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGTGATATGGGCGGCTaGCCGGGAGGTGTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCIGDMGG*PGGVGG
Trigger: TCCTCCGACACCTCCCGGCCAGCCGCCCATATCACC...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGATTTTGGGGGATTCCTaGTCCTTCCTGGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQILGDS*SFLGAG
Trigger: GCCTGCTCCCAGGAAGGACCAGGAATCCCCCAAAAT...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACACGGCCCTTGGAGTGCTaGAGGTGCAGCACCGCCGGG +
Preference number: 4 (lower is better)
Translates to: GHPDMTNVRKALSTALGTRPLEC*RCSTAG
Trigger: CCCGGCGGTGCTGCACCTCCAGCACTCCAAGGGCCG...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAGGTAGTCGCGGCCCTTaGAGTGCTGGAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VGHTEARPFPENTKPCIGGSRGP*SAGGAA
Trigger: TGCTGCACCTCCAGCACTCCAAGGGCCGCGACTACC...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGAGGGCTTCACTGCATaGCAGTCCTGCCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PRLFVARLVCVFLPASALEGFTA*QSCLEA
Trigger: GGCCTCTAGGCAGGACTGCCATGCAGTGAAGCCCTC...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGGAGGGCACTGGGCTTCTTAATGCTTTCACCCCTCCGAACACACACCGTTTTTTCACGCCGTTCCTCTaGGCTCCCGACTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: QEGTGLLNAFTPPNTHRFFTPFL*APDSVA
Trigger: TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAA...AAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAGAAGCCCAGTGCCCTCCTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCGGGAGAGGGTCCAGTaGCTTCACGCCGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSRERVQ*LHAVPL
Trigger: CAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCG...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTCGGGAGAGGGTCCAGTaGCTTCACGCCGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGRERVQ*LHAVPL
Trigger: CAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCG...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGCGGGAGAGGGTCCAGTaGCTTCACGCCGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPRERVQ*LHAVPL
Trigger: CAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCG...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGCCTTGCATAGGAAGCTaGGCAGGAGGAGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWPCIGS*AGGASR
Trigger: CCTGCTGGCTCCTCCTGCCCAGCTTCCTATGCAAGG...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTCCTTGCATAGGAAGCTaGGCAGGAGGAGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTPCIGS*AGGASR
Trigger: CCTGCTGGCTCCTCCTGCCCAGCTTCCTATGCAAGG...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACCTTGCATAGGAAGCTaGGCAGGAGGAGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ISTLKSALQFLSSEWRPQPCIGS*AGGASR
Trigger: CCTGCTGGCTCCTCCTGCCCAGCTTCCTATGCAAGG...TTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCCCCTCAACGAGGCACTaGGGTCCCAAGTACCAAGAG +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSPSTRH*GPKYQE
Trigger: CTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGG...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCAGCACGTGGTTTTAGGTaGCTAGAGCCTCAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PSNRRCSSFLQNGALNEAARGFR*LEPQLS
Trigger: CGAGAGCTGAGGCTCTAGCCACCTAAAACCACGTGC...TGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CGAACACACACCGTTTTAAACTGGTGGGTTTGGGCACGTGGTTTTAGGTGGCTACCCTGGCAGCCAGGCTaGAGAGCACGGCTTTCGGGA +
Preference number: 4 (lower is better)
Translates to: RTHTVLNWWVWARGFRWLPWQPG*RARLSG
Trigger: TCCCGAAAGCCGTGCTCTCCAGCCTGGCTGCCAGGG...TAGCCACCTAAAACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR CAA 72 bp CCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTaGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PKYQERAGDPDC*LPVWCAFFFQP
Trigger: AGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CGAACACACACCGTTTTAAACTGGTGGGTTTGGGCACGTGGTTTTAGGTGGCTATCCCCCTGGGTGGAATaGCCGGCTCTGGAGACGTCA +
Preference number: 4 (lower is better)
Translates to: RTHTVLNWWVWARGFRWLSPWVE*PALETS
Trigger: TGACGTCTCCAGAGCCGGTCATTCCACCCAGGGGGA...TAGCCACCTAAAACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR TCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGAGTGTCCAGTGGCAGCTaGAGTCCCCCTGGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGVSSGS*SPPGWN
Trigger: ATTCCACCCAGGGGGACTTCAGCTGCCACTGGACAC...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR TCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCCCGCCTTGGAGCGGGTaGTGTTGCCATGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGPPWSG*CCHGSS
Trigger: GCTGGAACCATGGCAACATCACCCGCTCCAAGGCGG...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGGTCAGTTTCTTCAGGTaGGGAAGACTGCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQVSFFR*GRLLDP
Trigger: AGGGTCCAGCAGTCTTCCTCACCTGAAGAAACTGAC...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTTGAGCTGCATTTTCTaGGGAATCCCCAGAGACTCT +
Preference number: 4 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPLSCIF*GIPRDS
Trigger: AGAGTCTCTGGGGATTCCTCAGAAAATGCAGCTCAA...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAACAGTACAGATGTGGCTaGTCCGGTTCTCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: VSQAVNSVGHTEARPFPEQYRCG*SGSRAQ
Trigger: CTGAGCACGAGAACCGGATCAGCCACATCTGTACTG...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGGTGCGTGAAGCGGTaGGTGATGTTAAAGGGACTC +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLRCVKR*VMLKGL
Trigger: GAGTCCCTTTAACATCACTCACCGCTTCACGCACCT...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGAGGTTGGGGCAAACGTaGTTTCTTCCTCCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: KYQERAGDPDCLLPVWCARLGQT*FLPPRS
Trigger: ACTTCGAGGAGGAAGAAATCACGTTTGCCCCAACCT...CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCTGTGGTCACTCGTCATaGTGTCGCTGGTACTGCCAT +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLCGHSS*CRWYCH
Trigger: ATGGCAGTACCAGCGACATCATGACGAGTGACCACA...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGTGTGGTCACTCGTCATaGTGTCGCTGGTACTGCCAT +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQCGHSS*CRWYCH
Trigger: ATGGCAGTACCAGCGACATCATGACGAGTGACCACA...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTACTCCCCATGGTGGGTaGGAGGCGTGTAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGTPHGG*EACRWA
Trigger: TGCCCATCTACACGCCTCTCACCCACCATGGGGAGT...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGAGAGAGGTCTGCAGCTTaGTCTCCCCCTGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGERSAA*SPPGSG
Trigger: GCCACTTCCAGGGGGAGATCAAGCTGCAGACCTCTC...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCACAGAGGATGAGCACGTaGAGGAGCGCAGCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPQRMST*RSAAGA
Trigger: CGCCCCGGCTGCGCTCCTTCACGTGCTCATCCTCTG...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGCGGGGTCTGCTGGTTaGTTTCCGATCTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PRLFVARLVCVFLPASALAGSAG*FPIWKA
Trigger: AGCCTTCCAGATCGGAAATCAACCAGCAGACCCCGC...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACAGGCCGGTGCTTGCCGTaGTGCGGGAGCTCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GHPDMTNVRKALSTALGTGRCLP*CGSSVL
Trigger: CAACACCGAGCTCCCGCATCACGGCAAGCACCGGCC...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTCAGTGGCAGCTCACTaGGGGCTTCACTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWSVAAH*GLHCMA
Trigger: TGCCATGCAGTGAAGCCCTCAGTGAGCTGCCACTGA...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCAAGTCTCACAGGCAGTaGACTCTGTGGGCCACACAG +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSKSHRQ*TLWATQ
Trigger: CTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTT...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTGCACTTGGCACATCATaGGTGTTCGATCCATGTGGC +
Preference number: 4 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFALGTS*VFDPCG
Trigger: GCCACATGGATCGAACACTCATGATGTGCCAAGTGC...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTAGCAGCTTGTGTCACTaGAGCTGGACAGAACAGGCT +
Preference number: 4 (lower is better)
Translates to: PRASWGPRLFVARLVCVFSSLCH*SWTEQA
Trigger: AGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCT...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAATCAGTGGCAGCTCACTaGGGGCTTCACTTGACTCCT +
Preference number: 4 (lower is better)
Translates to: VSQAVNSVGHTEARPFPESVAAH*GLHLTP
Trigger: AGGAGTCAAGTGAAGCCCTCAGTGAGCTGCCACTGA...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417661.1
ENST00000628842.1
CDS-3UTR GCA 90 bp CAGGAGGGCACTGGGCTTCTTAATGCTTTCACCCCTCCGAACACACACCGTTTTGAGAAGTGGTTCTTCTaGGGCCGTGCTGACACCCAC +
Preference number: 4 (lower is better)
Translates to: QEGTGLLNAFTPPNTHRFEKWFF*GRADTH
Trigger: GTGGGTGTCAGCACGGCCGCAGAAGAACCACTTCTC...AAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAGAAGCCCAGTGCCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR GCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCAACCTGCCGCCCGTTaGCTCTTGGTGGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSQPAAR*LLVASA
Trigger: AGCCGAGGCCACCAAGAGGCAACGGGCGGCAGGTTG...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CGAACACACACCGTTTTAAACTGGTGGGTTTGGGCACGTGGTTTTAGGTGGCTACACGCAGAGCGCGTATaGCCGGGAGATGGACTCGCT +
Preference number: 4 (lower is better)
Translates to: RTHTVLNWWVWARGFRWLHAERV*PGDGLA
Trigger: AGCGAGTCCATCTCCCGGGCATACGCGCTCTGCGTG...TAGCCACCTAAAACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGAAGCGGCACAGGGTATTaGAGATGGGTCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGSGTGY*RWVTSP
Trigger: GGGGCTGGTGACCCATCTGCAATACCCTGTGCCGCT...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTGGATGGCCTTAAGATaGTCTTCTGGAAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: KYQERAGDPDCLLPVWCAWMALR*SSGSPL
Trigger: CAGTGGGCTTCCAGAAGAGCATCTTAAGGCCATCCA...CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTCAGGTGAGGAAGACTaGTGGACCCTGTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: KYQERAGDPDCLLPVWCASGEED*WTLSSQ
Trigger: TTGTGAAGACAGGGTCCAGCAGTCTTCCTCACCTGA...CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGACTCCATAGAGCTCCTTaGAGAGCAGTGTGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: AQALASLAQAEARSLHWRLHRAP*RAVWSV
Trigger: AACTGACCACACTGCTCTGCAAGGAGCTCTATGGAG...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTGTTCTTCATCTGCTaGAGGAGCTGGCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: KYQERAGDPDCLLPVWCALFFIC*RSWQKP
Trigger: AGGCTTCTGCCAGCTCCTGCAGCAGATGAAGAACAA...CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCGGGGGTCCTCTTGGGTaGCGATCACGTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLGGPLG*RSRKCH
Trigger: ATGACATTTACGTGATCGGCACCCAAGAGGACCCCC...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTGGGGGTCCTCTTGGGTaGCGATCACGTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFGGPLG*RSRKCH
Trigger: ATGACATTTACGTGATCGGCACCCAAGAGGACCCCC...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGGCCAGCACCACGATaGGGATGTTCCAGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWWPAPR*GCSRAC
Trigger: ACACGCTCTGGAACATCCGCATCGTGGTGCTGGCCA...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCGTGGGACAGGAGGTCTaGGTACTGCTGCTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSVGQEV*VLLLLD
Trigger: ATCAAGCAGCAGCAGTACGCAGACCTCCTGTCCCAC...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGTGTAGGAAGACCTTCTaGTCCCTCCTCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQCRKTF*SLLSVS
Trigger: GCTCACAGAGAGGAGGGAGCAGAAGGTCTTCCTACA...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGCTTCTCCCTCGTCTTaGCCTGAGAGGTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PRLFVARLVCVFLPASALASPSS*PERSAA
Trigger: AGCTGCAGACCTCTCAGGGCAAGACGAGGGAGAAGC...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCCTAGTGACTTCCCACTaGTTCATGGGGTCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSLVTSH*FMGSWL
Trigger: CAGCCACGACCCCATGAAGCAGTGGGAAGTCACTAG...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAAAAGGTCTGCTTCACGTaGAGGGGCATTGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ISTLKSALQFLSSEWRPQKVCFT*RGIGGP
Trigger: TGGGCCACCAATGCCCCTGCACGTGAAGCAGACCTT...TTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAATCAGGGGACAAGGTCTaGTTCACGTGCAGGGGCATT +
Preference number: 4 (lower is better)
Translates to: VSQAVNSVGHTEARPFPESGDKV*FTCRGI
Trigger: AATGCCCCTGCACGTGAAGCAGACCTTGTCCCCTGA...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCAGGCAGCGTGTCCCCTaGGTTCTTCCCCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: GHTEARPFPENTKPCIGSRQRVP*VLPQVT
Trigger: AGTGACCTGGGGAAGAACGCAGGGGACACGCTGCCT...GCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGAAGGCAGCGTGTCCCCTaGGTTCTTCCCCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGRQRVP*VLPQVT
Trigger: AGTGACCTGGGGAAGAACGCAGGGGACACGCTGCCT...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAGGGGTGGGCGGGGTCTaGTGGTTGATTTCCGATCTG +
Preference number: 4 (lower is better)
Translates to: VGHTEARPFPENTKPCIGGVGGV*WLISDL
Trigger: CAGATCGGAAATCAACCAGCAGACCCCGCCCACCCC...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATATTGGAGTGCTGGAGGTaGAGCACCGCCGGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCILECWR*STAGLL
Trigger: CAAGAGCCCGGCGGTGCTGCACCTCCAGCACTCCAA...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGCCCTCAAATCGGCGCTaGAGTTCCTTTCTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPPSNRR*SSFLQN
Trigger: ATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTCATGGGAATGTGGGGTaGATTCCCTTCTGCATTCAC +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAHGNVG*IPFCIH
Trigger: GTGAATGCAGAAGGGAATGCACCCCACATTCCCATG...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCAATGCAGGGTCAGGGATGTGTGGGACAGGCAGACCTGGGTTCAAATCCTGACGCACACACACACAAATaGACACGAACCCACGTGTGG +
Preference number: 4 (lower is better)
Translates to: AMQGQGCVGQADLGSNPDAHTHK*TRTHVW
Trigger: CCACACGTGGGTTCGTGTGCATTTGTGTGTGTGTGC...GTCAGGATTTGAACCCAGGTCTGCCTGTCCCACACATCCCTGACCCTGCATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR CCA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAACCTAGCAGGCATGGGTaGGCCAGAGAAGTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: VSQAVNSVGHTEARPFPEPSRHG*AREVVL
Trigger: AAGAACCACTTCTCTGGCCCACCCATGCCTGCTAGG...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CCA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTTGGAATGACCGGCTCTaGAGACGTCAGGAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: PRASWGPRLFVARLVCVFWNDRL*RRQESC
Trigger: ACAACTCTCCTGACGTCTCCAGAGCCGGTCATTCCA...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CCA 90 bp TTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCCCCGTTGCCTCTTGGTaGCCTCGGCTGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: FIGYADFHHGNVGCIPFCPVASW*PRLLPP
Trigger: TGGTGGCAGCAGCCGAGGCCACCAAGAGGCAACGGG...GCAGAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCCCGCCCGTTGCCTCTTaGTGGCCTCGGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFPPVAS*WPRLLP
Trigger: TGGCAGCAGCCGAGGCCACCAAGAGGCAACGGGCGG...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGACAGCGGGATGTTTCTTaGGGGCAGCTCGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGQRDVS*GQLGWR
Trigger: TCTCCACCCGAGCTGCCCCCAAGAAACATCCCGCTG...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTTGGCCTCACAGGAGCTaGCAGTCAGCGGGATGTTTC +
Preference number: 4 (lower is better)
Translates to: PRLFVARLVCVFLPASALWPHRS*QSAGCF
Trigger: GAAACATCCCGCTGACTGCCAGCTCCTGTGAGGCCA...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCAAGAGGCTCGGCCGGCTaGTCTCGGTCGCTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPRGSAG*SRSLGD
Trigger: ATCCCCGAGCGACCGAGACCAGCCGGCCGAGCCTCT...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTATGCTTTGCAGTCGCTaGAACAATGTCTCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAMLCSR*NNVSER
Trigger: CCTCTCCGAGACATTGTTCCAGCGACTGCAAAGCAT...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTCCTTGCAGAGCAGTGTaGTCAGTTTCTTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAPCRAV*SVSSGE
Trigger: CTCACCTGAAGAAACTGACCACACTGCTCTGCAAGG...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCAGGAACCTGAGGACGTaGACGGAGGCCCGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSRNLRT*TEARGE
Trigger: CTCTCCCCGGGCCTCCGTCCACGTCCTCAGGTTCCT...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTCCTGCCTCAAATGTaGCAAAGACAGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PSNRRCSSFLQNGALNEALLPQM*QRQGCG
Trigger: ACCACAGCCCTGTCTTTGCCACATTTGAGGCAGGAG...TGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTCCTGCCTCAAATGTaGCAAAGACAGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PRASWGPRLFVARLVCVFLLPQM*QRQGCG
Trigger: ACCACAGCCCTGTCTTTGCCACATTTGAGGCAGGAG...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAAACTCAATCTGTCCTTaGCTGTCAACAGTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: AQALASLAQAEARSLHWRNSICP*LSTVPG
Trigger: TCCCGGGACTGTTGACAGCCAAGGACAGATTGAGTT...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTCTGATGAGGATGTGCTaGTCTAGCAGGTACTCAGGG +
Preference number: 4 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFLMRMC*SSRYSG
Trigger: CCCTGAGTACCTGCTAGACCAGCACATCCTCATCAG...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTATCTCCCCCTGGAAGTaGCCTGTCAACTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: PRLFVARLVCVFLPASALISPWK*PVNSPW
Trigger: CCATGGGGAGTTGACAGGCCACTTCCAGGGGGAGAT...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGATCTCCCCCTGGAAGTaGCCTGTCAACTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWISPWK*PVNSPW
Trigger: CCATGGGGAGTTGACAGGCCACTTCCAGGGGGAGAT...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGTGCTTCATGGGGTCGTaGCTGGTGAGGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVCFMGS*LVRLFR
Trigger: CCTGAAGAGCCTCACCAGCCACGACCCCATGAAGCA...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGCTTCATGGGGTCGTaGCTGGTGAGGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTCFMGS*LVRLFR
Trigger: CCTGAAGAGCCTCACCAGCCACGACCCCATGAAGCA...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTTGCTTCATGGGGTCGTaGCTGGTGAGGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VARLVCVFLPASALGAKSCFMGS*LVRLFR
Trigger: CCTGAAGAGCCTCACCAGCCACGACCCCATGAAGCA...AGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGGTGCAGGGGCATTGGTaGCCCAAAGGGCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRVQGHW*PKGPHS
Trigger: GGAGTGGGGCCCTTTGGGCCACCAATGCCCCTGCAC...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCGTGCAGGGGCATTGGTaGCCCAAAGGGCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPVQGHW*PKGPHS
Trigger: GGAGTGGGGCCCTTTGGGCCACCAATGCCCCTGCAC...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGCACGTGCAGGGGCATTaGTGGCCCAAAGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: WRIGADFLLLPTKELRSQHVQGH*WPKGPH
Trigger: GTGGGGCCCTTTGGGCCACCAATGCCCCTGCACGTG...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCACGTGCAGGGGCATTaGTGGCCCAAAGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRHVQGH*WPKGPH
Trigger: GTGGGGCCCTTTGGGCCACCAATGCCCCTGCACGTG...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCCCAGCGGGGAGTCCTTaGGCGGCTGGTCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFPAGSP*AAGRSS
Trigger: GGAGCTACGACCAGCCGCCCAAGGACTCCCCGCTGG...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGGGTGATATGGGCGGCTaGCCGGGAGGTGTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: WRIGADFLLLPTKELRSQGDMGG*PGGVGG
Trigger: TCCTCCGACACCTCCCGGCCAGCCGCCCATATCACC...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCGGTGATATGGGCGGCTaGCCGGGAGGTGTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSGDMGG*PGGVGG
Trigger: TCCTCCGACACCTCCCGGCCAGCCGCCCATATCACC...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTACTTCTTGGGTGATATaGGCGGCTGGCCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGTSWVI*AAGREV
Trigger: CACCTCCCGGCCAGCCGCCCATATCACCCAAGAAGT...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACATTGACTCCTGTGTCCTaGGAGGGAGACCCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTLTPVS*EGDPGL
Trigger: CAAACCGGGGTCTCCCTCCCAGGACACAGGAGTCAA...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAATTTTGGGGGATTCCTaGTCCTTCCTGGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VSQAVNSVGHTEARPFPEILGDS*SFLGAG
Trigger: GCCTGCTCCCAGGAAGGACCAGGAATCCCCCAAAAT...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTTCACGCCGTTCCTCTaGGCTCCCGACTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPFTPFL*APDSVA
Trigger: TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAA...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTTTCACGCCGTTCCTCTaGGCTCCCGACTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGFTPFL*APDSVA
Trigger: TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAA...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCCGGGAGAGGGTCCAGTaGCTTCACGCCGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGRERVQ*LHAVPL
Trigger: CAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCG...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATACGGGAGAGGGTCCAGTaGCTTCACGCCGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCIRERVQ*LHAVPL
Trigger: CAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCG...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCGTACCAAGAGCGAGCTaGGGACCCAGACTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTVPRAS*GPRLFV
Trigger: AACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTAC...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACACCCTCAACGAGGCACTaGGGTCCCAAGTACCAAGAG +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTPSTRH*GPKYQE
Trigger: CTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGG...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGACACACCGTTTTAAACTaGTGGGTTTGGGCACGTGGT +
Preference number: 4 (lower is better)
Translates to: AQALASLAQAEARSLHWRHTVLN*WVWARG
Trigger: ACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTG...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGCACACCGTTTTAAACTaGTGGGTTTGGGCACGTGGT +
Preference number: 4 (lower is better)
Translates to: KYQERAGDPDCLLPVWCAHTVLN*WVWARG
Trigger: ACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTG...CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCCGCAGACTTCCATCATaGGAATGTGGGGTGCATTCC +
Preference number: 4 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTRRLPS*ECGVHS
Trigger: GGAATGCACCCCACATTCCCATGATGGAAGTCTGCG...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTCTTCCTTTTAACAACTGCTGCAGAGGCAATGCAGGGTCAGGGATGTGTGGGAACACGAACCCACGTGTaGCGCAGCGCACCTGCATGG +
Preference number: 4 (lower is better)
Translates to: FFLLTTAAEAMQGQGCVGTRTHV*RSAPAW
Trigger: CCATGCAGGTGCGCTGCGCCACACGTGGGTTCGTGT...TCCCACACATCCCTGACCCTGCATTGCCTCTGCAGCAGTTGTTAAAAGGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR CCA 90 bp GCAATGCAGGGTCAGGGATGTGTGGGACAGGCAGACCTGGGTTCAAATCCTGACTGGGACAGGCAGACCTaGGTTCAAATCCTGACTCTC +
Preference number: 4 (lower is better)
Translates to: AMQGQGCVGQADLGSNPDWDRQT*VQILTL
Trigger: GAGAGTCAGGATTTGAACCCAGGTCTGCCTGTCCCA...GTCAGGATTTGAACCCAGGTCTGCCTGTCCCACACATCCCTGACCCTGCATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
3UTR CAA 72 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTaGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KYQERAGDPDCL*PVWCAFFFQPQ
Trigger: CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCCCGCCTTGGAGCGGGTaGTGTTGCCATGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPPPWSG*CCHGSS
Trigger: GCTGGAACCATGGCAACATCACCCGCTCCAAGGCGG...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCCCGCCTTGGAGCGGGTaGTGTTGCCATGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPPPWSG*CCHGSS
Trigger: GCTGGAACCATGGCAACATCACCCGCTCCAAGGCGG...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGAGCTGGTCCAGCTTGGTaGAGAACCTCATGGAGACGC +
Preference number: 4 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGAGPAW*RTSWRR
Trigger: GCGTCTCCATGAGGTTCTTCACCAAGCTGGACCAGC...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGAGCTGGTCCAGCTTGGTaGAGAACCTCATGGAGACGC +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGAGPAW*RTSWRR
Trigger: GCGTCTCCATGAGGTTCTTCACCAAGCTGGACCAGC...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGCGTGCAGCAAGGCCTTaGCCTTGTCTTCAATGGACG +
Preference number: 4 (lower is better)
Translates to: LAQAEARSLHWRIGADFLRAARP*PCLQWT
Trigger: CGTCCATTGAAGACAAGGTCAAGGCCTTGCTGCACG...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCGGGCTCCGGCTGCTCTaGGTGCTTGTTCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: GMWGAFPSAFTHTTGFSSGLRLL*VLVLHL
Trigger: CAGATGAAGAACAAGCACTCAGAGCAGCCGGAGCCC...GGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTTGCAGGGAGTGTTTaGGGATCTCCAGCCACTCCT +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVLAGSV*GSPATP
Trigger: AGGAGTGGCTGGAGATCCTCAAACACTCCCTGCAAG...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCAAAGTCAAGTGGCTGTTaGCGAACCCTAAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: PSNRRCSSFLQNGALNEAKSSGC*RTLRRF
Trigger: GAACCTCCTTAGGGTTCGTCAACAGCCACTTGACTT...TGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGGTTGGGGCAAACGTaGTTTCTTCCTCCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLRLGQT*FLPPRS
Trigger: ACTTCGAGGAGGAAGAAATCACGTTTGCCCCAACCT...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCCTCCTTCCTGACTCTTaGCAAAACTCTCCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLLLPDS*QNSPSS
Trigger: GCTGCTTGGAGAGTTTTGTCAAGAGTCAGGAAGGAG...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTCTCCTTCCTGACTCTTaGCAAAACTCTCCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFLLPDS*QNSPSS
Trigger: GCTGCTTGGAGAGTTTTGTCAAGAGTCAGGAAGGAG...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGACTCCCCATGGTGGGTaGGAGGCGTGTAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: HTEARPFPENTKPCIGSWTPHGG*EACRWA
Trigger: TGCCCATCTACACGCCTCTCACCCACCATGGGGAGT...CCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCGAGAGGTCTGCAGCTTaGTCTCCCCCTGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGERSAA*SPPGSG
Trigger: GCCACTTCCAGGGGGAGATCAAGCTGCAGACCTCTC...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTTCCCTCGTCTTGCCCTaGGAGGTCTGCAGCTTGATC +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSSLVLP*EVCSLI
Trigger: GATCAAGCTGCAGACCTCTCAGGGCAAGACGAGGGA...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCCAGGTCACTGGGCCTTaGCTCCTGTGTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPQVTGP*LLCPGR
Trigger: CCTCCCAGGACACAGGAGTCAAGGCCCAGTGACCTG...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCAGGTCACTGGGCCTTaGCTCCTGTGTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSQVTGP*LLCPGR
Trigger: CCTCCCAGGACACAGGAGTCAAGGCCCAGTGACCTG...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCCTCCTGGGCTTTGGTaGGCACGATGCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSPPGLW*ARCWAT
Trigger: TGTCGCCCAGCATCGTGCTCACCAAAGCCCAGGAGG...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCGCCCTCGGCAGAGGATaGGCACGTGAAGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFALGRG*AREGAQ
Trigger: CTGCGCTCCTTCACGTGCTCATCCTCTGCCGAGGGC...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGAGCGGGGTCTGCTGGTTaGTTTCCGATCTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGAGSAG*FPIWKA
Trigger: AGCCTTCCAGATCGGAAATCAACCAGCAGACCCCGC...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCAGCAGCTTGTGTCACTaGAGCTGGACAGAACAGGCT +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSSSLCH*SWTEQA
Trigger: AGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCT...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCTGGAGAATAGGAGCTaGTTTCCTGCTCCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQLENRS*FPAPSN
Trigger: GTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAG...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGAGAATAGGAGCTaGTTTCCTGCTCCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: PSNRRCSSFLQNGALNEALENRS*FPAPSN
Trigger: GTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAG...TGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAACTGAGGGCTTCACTTaGCTCCTGTGTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VGHTEARPFPENTKPCIGTEGFT*LLCPGR
Trigger: CCTCCCAGGACACAGGAGTCAAGTGAAGCCCTCAGT...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417661.1
ENST00000628842.1
CDS-3UTR TCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGTCAGTGGCAGCTCACTaGGGGCTTCACTTGACTCCT +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVSVAAH*GLHLTP
Trigger: AGGAGTCAAGTGAAGCCCTCAGTGAGCTGCCACTGA...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417661.1
ENST00000628842.1
CDS-3UTR TCA 90 bp TCTCCCTTCTCATGGAGCAGTTCCCAGGACCATCACTCGCATGTGTGCACATGCCCTGGGTTCAAATCCTaGCTCTCCCTTCTCATGGAG +
Preference number: 4 (lower is better)
Translates to: SPFSWSSSQDHHSHVCTCPGFKS*LSLLME
Trigger: CTCCATGAGAAGGGAGAGTCAGGATTTGAACCCAGG...GCATGTGCACACATGCGAGTGATGGTCCTGGGAACTGCTCCATGAGAAGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR GCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTCGGAGGCCCCTCCACTaGAACCTGCCGCCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSRRPLH*NLPPVA
Trigger: GGCAACGGGCGGCAGGTTGCAGTGGAGGGGCCTCCG...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCGGAAGCTCCCGTCCTTaGCTGTCCTGGAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GMWGAFPSAFTHTTGFSSGSSRP*LSWKAA
Trigger: AGCTGCTTTCCAGGACAGGCAAGGACGGGAGCTTCC...GGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAAGCGGCACAGGGTATTaGAGATGGGTCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCISGTGY*RWVTSP
Trigger: GGGGCTGGTGACCCATCTGCAATACCCTGTGCCGCT...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAGCCCACTGGTGTCCATaGTTTGCAGTCGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTAHWCP*FAVAGT
Trigger: TGTTCCAGCGACTGCAAAGCATGGACACCAGTGGGC...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGGAGGGCACTGGGCTTCTTAATGCTTTCACCCCTCCGAACACACACCGTTTTGCCCACTGGTGTCCATaGTTTGCAGTCGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: QEGTGLLNAFTPPNTHRFAHWCP*FAVAGT
Trigger: TGTTCCAGCGACTGCAAAGCATGGACACCAGTGGGC...AAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAGAAGCCCAGTGCCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCTCAGGTGAGGAAGACTaGTGGACCCTGTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTSGEED*WTLSSQ
Trigger: TTGTGAAGACAGGGTCCAGCAGTCTTCCTCACCTGA...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCAGGCCCGGGGAGAGCTaGTGGTCAAATAACCTCTGC +
Preference number: 4 (lower is better)
Translates to: GHTEARPFPENTKPCIGSRPGES*WSNNLC
Trigger: GCAGAGGTTATTTGACCAGCAGCTCTCCCCGGGCCT...GCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCATTGTTCTTCATCTGCTaGAGGAGCTGGCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: PSNRRCSSFLQNGALNEALFFIC*RSWQKP
Trigger: AGGCTTCTGCCAGCTCCTGCAGCAGATGAAGAACAA...TGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAATGTCGGGCTCCGGCTaGTCTGAGTGCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTMSGSG*SECLFF
Trigger: GAAGAACAAGCACTCAGAGCAGCCGGAGCCCGACAT...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGATCCCGCGTCTTTCCCTaGCCCTTGGAGAGAAACCAG +
Preference number: 4 (lower is better)
Translates to: VGHTEARPFPENTKPCIGSRVFP*PLERNQ
Trigger: CTGGTTTCTCTCCAAGGGGCAGGGAAAGACGCGGGA...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCGGGGGTCCTCTTGGGTaGCGATCACGTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSGGPLG*RSRKCH
Trigger: ATGACATTTACGTGATCGGCACCCAAGAGGACCCCC...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGCCAGCACCACGATaGGGATGTTCCAGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: GHTEARPFPENTKPCIGSWPAPR*GCSRAC
Trigger: ACACGCTCTGGAACATCCGCATCGTGGTGCTGGCCA...GCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCCTGATCCGGTTCTCGTaGTCAGGCTTGGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGLIRFS*SGLAST
Trigger: GGTGCTGGCCAAGCCTGAGCACGAGAACCGGATCAG...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CGAACACACACCGTTTTAAACTGGTGGGTTTGGGCACGTGGTTTTAGGTGGCTACTGATCCGGTTCTCGTaGTCAGGCTTGGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: RTHTVLNWWVWARGFRWLLIRFS*SGLAST
Trigger: GGTGCTGGCCAAGCCTGAGCACGAGAACCGGATCAG...TAGCCACCTAAAACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGCCAGTGTGTTTGCAATaGCTGTCTTCACGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: KYQERAGDPDCLLPVWCAPVCLQ*LSSRCQ
Trigger: CTGACAACGTGAAGACAGGCATTGCAAACACACTGG...CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGGTGGGACAGGAGGTCTaGGTACTGCTGCTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: LAQAEARSLHWRIGADFLVGQEV*VLLLLD
Trigger: ATCAAGCAGCAGCAGTACGCAGACCTCCTGTCCCAC...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGAGCTTCTCCCTCGTCTTaGCCTGAGAGGTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGASPSS*PERSAA
Trigger: AGCTGCAGACCTCTCAGGGCAAGACGAGGGAGAAGC...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGGCTTCTCCCTCGTCTTaGCCTGAGAGGTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPASPSS*PERSAA
Trigger: AGCTGCAGACCTCTCAGGGCAAGACGAGGGAGAAGC...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGCTAGTGACTTCCCACTaGTTCATGGGGTCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWLVTSH*FMGSWL
Trigger: CAGCCACGACCCCATGAAGCAGTGGGAAGTCACTAG...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACACTAGTGACTTCCCACTaGTTCATGGGGTCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTLVTSH*FMGSWL
Trigger: CAGCCACGACCCCATGAAGCAGTGGGAAGTCACTAG...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTCTAGTGACTTCCCACTaGTTCATGGGGTCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PRLFVARLVCVFLPASALLVTSH*FMGSWL
Trigger: CAGCCACGACCCCATGAAGCAGTGGGAAGTCACTAG...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGAAAGGTCTGCTTCACGTaGAGGGGCATTGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGKVCFT*RGIGGP
Trigger: TGGGCCACCAATGCCCCTGCACGTGAAGCAGACCTT...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTAAGGTCTGCTTCACGTaGAGGGGCATTGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPKVCFT*RGIGGP
Trigger: TGGGCCACCAATGCCCCTGCACGTGAAGCAGACCTT...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTCAGGGGACAAGGTCTaGTTCACGTGCAGGGGCATT +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWSGDKV*FTCRGI
Trigger: AATGCCCCTGCACGTGAAGCAGACCTTGTCCCCTGA...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCCTCCAGGCTGTGGGCTaGTGGTCAGGGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPLQAVG*WSGDKV
Trigger: GACCTTGTCCCCTGACCAGCAGCCCACAGCCTGGAG...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAAGGCAGCGTGTCCCCTaGGTTCTTCCCCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCIRQRVP*VLPQVT
Trigger: AGTGACCTGGGGAAGAACGCAGGGGACACGCTGCCT...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCGGGGTGGGCGGGGTCTaGTGGTTGATTTCCGATCTG +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGGVGGV*WLISDL
Trigger: CAGATCGGAAATCAACCAGCAGACCCCGCCCACCCC...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGGAGGCCCAGGCAGGCAGATCACCTGGCGAAACTCAGTTGCAAAACAAATTTACTGCTGCAGAGGCAATaGAGGGTCAGGGATGTGTGG +
Preference number: 4 (lower is better)
Translates to: GRPRQADHLAKLSCKTNLLLQRQ*RVRDVW
Trigger: CCACACATCCCTGACCCTGCATTGCCTCTGCAGCAG...TAAATTTGTTTTGCAACTGAGTTTCGCCAGGTGATCTGCCTGCCTGGGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR CCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCTCCTTCCTGGCAACTaGTCGCAGCGTACAATTGAA +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQLLPGN*SQRTIE
Trigger: TTCAATTGTACGCTGCGACCAGTTGCCAGGAAGGAG...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGAGCAGGGGACCATGGTaGGCGTGGGCCTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMSRGPW*AWASSA
Trigger: GGCCGAGGAGGCCCACGCCCACCATGGTCCCCTGCT...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCGGGAGATGGACTCGCTaGCACGCACGAGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPGRWTR*HARGSS
Trigger: GGAGCTTCCTCGTGCGTGCCAGCGAGTCCATCTCCC...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCACAGGGTATTGCAGATaGGTCACCAGCCCCATGTTT +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLTGYCR*VTSPMF
Trigger: AAACATGGGGCTGGTGACCCATCTGCAATACCCTGT...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGATGGGGGCAGCTCGGGTaGAGACACGACACTTTCTGT +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGWGQLG*RHDTFC
Trigger: ACAGAAAGTGTCGTGTCTCCACCCGAGCTGCCCCCA...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CCA 90 bp CCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACCTTGCAGAGCAGTGTaGTCAGTTTCTTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: PSNRRCSSFLQNGALNEAPCRAV*SVSSGE
Trigger: CTCACCTGAAGAAACTGACCACACTGCTCTGCAAGG...TGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTCCTTGCAGAGCAGTGTaGTCAGTTTCTTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFPCRAV*SVSSGE
Trigger: CTCACCTGAAGAAACTGACCACACTGCTCTGCAAGG...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCAGAGACTCCAGGGATaGGAGGGTCCGGATGACTTC +
Preference number: 4 (lower is better)
Translates to: GMWGAFPSAFTHTTGFSSQRLQG*EGPDDF
Trigger: GAAGTCATCCGGACCCTCCCATCCCTGGAGTCTCTG...GGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTCAGAGACTCCAGGGATaGGAGGGTCCGGATGACTTC +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPQRLQG*EGPDDF
Trigger: GAAGTCATCCGGACCCTCCCATCCCTGGAGTCTCTG...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCAAACAGGCTTGTCAGTTaGCTGAGCTTGGACACCATG +
Preference number: 4 (lower is better)
Translates to: PSNRRCSSFLQNGALNEANRLVS*LSLDTM
Trigger: CATGGTGTCCAAGCTCAGCCAACTGACAAGCCTGTT...TGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTAACAGGCTTGTCAGTTaGCTGAGCTTGGACACCATG +
Preference number: 4 (lower is better)
Translates to: PRASWGPRLFVARLVCVFNRLVS*LSLDTM
Trigger: CATGGTGTCCAAGCTCAGCCAACTGACAAGCCTGTT...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCTTGTCAGTACAGATGTaGCTGATCCGGTTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLLSVQM*LIRFSC
Trigger: GCACGAGAACCGGATCAGCCACATCTGTACTGACAA...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGCTCAAAACGGTAGGTTaGGGCAAACGTGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPLKTVG*GKRDFF
Trigger: GAAGAAATCACGTTTGCCCCAACCTACCGTTTTGAG...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCCTGTCGCTTTCTGCTTaGTGTAGGCGTATTTGTCCC +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLLSLSA*CRRICP
Trigger: GGGACAAATACGCCTACACCAAGCAGAAAGCGACAG...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAACTCAATCTGTCCTTaGCTGTCAACAGTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTNSICP*LSTVPG
Trigger: TCCCGGGACTGTTGACAGCCAAGGACAGATTGAGTT...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGAATCTCCCCCTGGAAGTaGCCTGTCAACTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGISPWK*PVNSPW
Trigger: CCATGGGGAGTTGACAGGCCACTTCCAGGGGGAGAT...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTAGCTTGATCTCCCCCTaGAAGTGGCCTGTCAACTCC +
Preference number: 4 (lower is better)
Translates to: PRLFVARLVCVFLPASALSLISP*KWPVNS
Trigger: GGAGTTGACAGGCCACTTCCAGGGGGAGATCAAGCT...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGGAGGGCACTGGGCTTCTTAATGCTTTCACCCCTCCGAACACACACCGTTTTGGGTCTTTGGCCCACTaGATTCATCACGCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: QEGTGLLNAFTPPNTHRFGSLAH*IHHAPS
Trigger: AGACGGAGCGTGATGAATCCAGTGGGCCAAAGACCC...AAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAGAAGCCCAGTGCCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTGGGTCTTTGGCCCACTaGATTCATCACGCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: VARLVCVFLPASALGAKSGSLAH*IHHAPS
Trigger: AGACGGAGCGTGATGAATCCAGTGGGCCAAAGACCC...AGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCTGCTTCATGGGGTCGTaGCTGGTGAGGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GMWGAFPSAFTHTTGFSSCFMGS*LVRLFR
Trigger: CCTGAAGAGCCTCACCAGCCACGACCCCATGAAGCA...GGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCTTCATGGGGTCGTaGCTGGTGAGGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPCFMGS*LVRLFR
Trigger: CCTGAAGAGCCTCACCAGCCACGACCCCATGAAGCA...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTTGCTTCATGGGGTCGTaGCTGGTGAGGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSCFMGS*LVRLFR
Trigger: CCTGAAGAGCCTCACCAGCCACGACCCCATGAAGCA...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCACACGTGCAGGGGCATTaGTGGCCCAAAGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPHVQGH*WPKGPH
Trigger: GTGGGGCCCTTTGGGCCACCAATGCCCCTGCACGTG...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCCAGGCTGTGGGCTGCTaGTCAGGGGACAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPQAVGC*SGDKVC
Trigger: GCAGACCTTGTCCCCTGACCAGCAGCCCACAGCCTG...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCAGGCTGTGGGCTGCTaGTCAGGGGACAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSQAVGC*SGDKVC
Trigger: GCAGACCTTGTCCCCTGACCAGCAGCCCACAGCCTG...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACAGGTGATATGGGCGGCTaGCCGGGAGGTGTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: GHPDMTNVRKALSTALGTGDMGG*PGGVGG
Trigger: TCCTCCGACACCTCCCGGCCAGCCGCCCATATCACC...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGGGTAAAAACTTCTTaGGTGATATGGGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLRVKTS*VIWAAG
Trigger: GCCAGCCGCCCATATCACCCAAGAAGTTTTTACCCT...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAGGGTAAAAACTTCTTaGGTGATATGGGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTRVKTS*VIWAAG
Trigger: GCCAGCCGCCCATATCACCCAAGAAGTTTTTACCCT...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCAAGGGTAAAAACTTCTTaGGTGATATGGGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PSNRRCSSFLQNGALNEARVKTS*VIWAAG
Trigger: GCCAGCCGCCCATATCACCCAAGAAGTTTTTACCCT...TGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCTTGACTCCTGTGTCCTaGGAGGGAGACCCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: GMWGAFPSAFTHTTGFSSLTPVS*EGDPGL
Trigger: CAAACCGGGGTCTCCCTCCCAGGACACAGGAGTCAA...GGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTTGACTCCTGTGTCCTaGGAGGGAGACCCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPLTPVS*EGDPGL
Trigger: CAAACCGGGGTCTCCCTCCCAGGACACAGGAGTCAA...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCCTTCCGCGGCATTTTaGGGGATTCCTGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GMWGAFPSAFTHTTGFSSPSAAF*GIPGPS
Trigger: GGAAGGACCAGGAATCCCCCAAAATGCCGCGGAAGG...GGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGGTGGGCGGGGTCTGCTaGTTGATTTCCGATCTGGAA +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVVGGVC*LISDLE
Trigger: TTCCAGATCGGAAATCAACCAGCAGACCCCGCCCAC...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCGGTAGTCGCGGCCCTTaGAGTGCTGGAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FIGYADFHHGNVGCIPFCGSRGP*SAGGAA
Trigger: TGCTGCACCTCCAGCACTCCAAGGGCCGCGACTACC...GCAGAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCGGTAGTCGCGGCCCTTaGAGTGCTGGAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPGSRGP*SAGGAA
Trigger: TGCTGCACCTCCAGCACTCCAAGGGCCGCGACTACC...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCGTACCAAGAGCGAGCTaGGGACCCAGACTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSVPRAS*GPRLFV
Trigger: AACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTAC...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGACCCTCAACGAGGCACTaGGGTCCCAAGTACCAAGAG +
Preference number: 4 (lower is better)
Translates to: VGHTEARPFPENTKPCIGPSTRH*GPKYQE
Trigger: CTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGG...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGGCACGTGGTTTTAGGTaGCTAGAGCCTCAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LAQAEARSLHWRIGADFLARGFR*LEPQLS
Trigger: CGAGAGCTGAGGCTCTAGCCACCTAAAACCACGTGC...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTTCCATCATGGGAATGTaGGGTGCATTCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PRASWGPRLFVARLVCVFSIMGM*GAFPSA
Trigger: TGCAGAAGGGAATGCACCCCACATTCCCATGATGGA...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGTCCATCATGGGAATGTaGGGTGCATTCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQSIMGM*GAFPSA
Trigger: TGCAGAAGGGAATGCACCCCACATTCCCATGATGGA...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGAAAGGCACAATTTATTaGTTACGCAGACTTCCATCA +
Preference number: 4 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQKGTIY*LRRLPS
Trigger: TGATGGAAGTCTGCGTAACCAATAAATTGTGCCTTT...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCATGGAGCAGTTCCCAGGACCATCACTCGCATGTGTGCACATGCATGCGTTCAGTAATCCCAGAACTTTaGGAGGCCCAGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SWSSSQDHHSHVCTCMRSVIPEL*EAQAGR
Trigger: TCTGCCTGCCTGGGCCTCCCAAAGTTCTGGGATTAC...TGAACGCATGCATGTGCACACATGCGAGTGATGGTCCTGGGAACTGCTCCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR TCA 90 bp TCTCGAGGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTCTTCTGCGGCCGTGCTaGCACCCACGTGGGATGCCA +
Preference number: 4 (lower is better)
Translates to: SRGHPDMTNVRKALSTALLLRPC*HPRGMP
Trigger: TGGCATCCCACGTGGGTGTCAGCACGGCCGCAGAAG...AAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACCTCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR TCA 90 bp CAGGAGGGCACTGGGCTTCTTAATGCTTTCACCCCTCCGAACACACACCGTTTTGTCAGTTTCTTCAGGTaGGGAAGACTGCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: QEGTGLLNAFTPPNTHRFVSFFR*GRLLDP
Trigger: AGGGTCCAGCAGTCTTCCTCACCTGAAGAAACTGAC...AAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAGAAGCCCAGTGCCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTGCTTGGACACCATGTTaGTGGGATTGGCCTCACCAG +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPAWTPC*WDWPHQ
Trigger: CTGGTGAGGCCAATCCCATCAACATGGTGTCCAAGC...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGGCTTGGACACCATGTTaGTGGGATTGGCCTCACCAG +
Preference number: 4 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPAWTPC*WDWPHQ
Trigger: CTGGTGAGGCCAATCCCATCAACATGGTGTCCAAGC...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGCGTGCAGCAAGGCCTTaGCCTTGTCTTCAATGGACG +
Preference number: 4 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPRAARP*PCLQWT
Trigger: CGTCCATTGAAGACAAGGTCAAGGCCTTGCTGCACG...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTCGTGCAGCAAGGCCTTaGCCTTGTCTTCAATGGACG +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGRAARP*PCLQWT
Trigger: CGTCCATTGAAGACAAGGTCAAGGCCTTGCTGCACG...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTTTGAGCTGCATTTTCTaGGGAATCCCCAGAGACTCT +
Preference number: 4 (lower is better)
Translates to: PRASWGPRLFVARLVCVFLSCIF*GIPRDS
Trigger: AGAGTCTCTGGGGATTCCTCAGAAAATGCAGCTCAA...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGGCTCCGGCTGCTCTaGGTGCTTGTTCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCIGLRLL*VLVLHL
Trigger: CAGATGAAGAACAAGCACTCAGAGCAGCCGGAGCCC...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTTGCAGGGAGTGTTTaGGGATCTCCAGCCACTCCT +
Preference number: 4 (lower is better)
Translates to: GMWGAFPSAFTHTTGFSSLAGSV*GSPATP
Trigger: AGGAGTGGCTGGAGATCCTCAAACACTCCCTGCAAG...GGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTATGTGGCATAGCACCTaGGAAACTCAATCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAMWHST*ETQSVL
Trigger: AAGGACAGATTGAGTTTCTCAGGTGCTATGCCACAT...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGGAGAGGTCTGCAGCTTaGTCTCCCCCTGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: WRIGADFLLLPTKELRSQERSAA*SPPGSG
Trigger: GCCACTTCCAGGGGGAGATCAAGCTGCAGACCTCTC...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ATTATTATCTATATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAAAGCGGCAGGTCCTCCTaGGGCAGCGTGTCCCCTGCG +
Preference number: 4 (lower is better)
Translates to: IIIYISTLKSALQFLSSESGRSS*GSVSPA
Trigger: CGCAGGGGACACGCTGCCTCAGGAGGACCTGCCGCT...TTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATAGATAATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAACCGGGGCCTGGGAGCTaGCCGGGGTCTTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQPGPGS*PGSWAS
Trigger: GGAAGCCCAAGACCCCGGTCAGCTCCCAGGCCCCGG...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCACCGGGGCCTGGGAGCTaGCCGGGGTCTTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: KQHKERHHPSILLITKEAPGPGS*PGSWAS
Trigger: GGAAGCCCAAGACCCCGGTCAGCTCCCAGGCCCCGG...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCACCGATCTGGAAGGCTTaGTGGGCCTCTTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPPIWKA*WASWPA
Trigger: TGCCGGCCAAGAGGCCCATCAAGCCTTCCAGATCGG...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CGAACACACACCGTTTTAAACTGGTGGGTTTGGGCACGTGGTTTTAGGTGGCTAGCGGGGTCTGCTGGTTaGTTTCCGATCTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: RTHTVLNWWVWARGFRWLAGSAG*FPIWKA
Trigger: AGCCTTCCAGATCGGAAATCAACCAGCAGACCCCGC...TAGCCACCTAAAACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CGAACACACACCGTTTTAAACTGGTGGGTTTGGGCACGTGGTTTTAGGTGGCTATCAGTGGCAGCTCACTaGGGGCTTCACTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: RTHTVLNWWVWARGFRWLSVAAH*GLHCMA
Trigger: TGCCATGCAGTGAAGCCCTCAGTGAGCTGCCACTGA...TAGCCACCTAAAACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATATCAGTGGCAGCTCACTaGGGGCTTCACTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCISVAAH*GLHCMA
Trigger: TGCCATGCAGTGAAGCCCTCAGTGAGCTGCCACTGA...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTAAGTCTCACAGGCAGTaGACTCTGTGGGCCACACAG +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSKSHRQ*TLWATQ
Trigger: CTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTT...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTAGCAGCTTGTGTCACTaGAGCTGGACAGAACAGGCT +
Preference number: 4 (lower is better)
Translates to: VARLVCVFLPASALGAKSSSLCH*SWTEQA
Trigger: AGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCT...AGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAACTGGAGAATAGGAGCTaGTTTCCTGCTCCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: VSQAVNSVGHTEARPFPELENRS*FPAPSN
Trigger: GTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAG...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCTCGAGGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTCAACCTGCCGCCCGTTaGCTCTTGGTGGCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SRGHPDMTNVRKALSTALQPAAR*LLVASA
Trigger: AGCCGAGGCCACCAAGAGGCAACGGGCGGCAGGTTG...AAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACCTCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCGGAAGCTCCCGTCCTTaGCTGTCCTGGAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGGSSRP*LSWKAA
Trigger: AGCTGCTTTCCAGGACAGGCAAGGACGGGAGCTTCC...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCCTGGTGTCCATGCTTTaGAGTCGCTGGAACAATGTC +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSLVSML*SRWNNV
Trigger: GACATTGTTCCAGCGACTGCAAAGCATGGACACCAG...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAACTCCATAGAGCTCCTTaGAGAGCAGTGTGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: VSQAVNSVGHTEARPFPELHRAP*RAVWSV
Trigger: AACTGACCACACTGCTCTGCAAGGAGCTCTATGGAG...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTGGTCAAATAACCTCTaGAGAGACTCCAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSWSNNL*RDSRDG
Trigger: CCCATCCCTGGAGTCTCTGCAGAGGTTATTTGACCA...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGCTGATCCGGTTCTCGTaGTCAGGCTTGGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: WRIGADFLLLPTKELRSQLIRFS*SGLAST
Trigger: GGTGCTGGCCAAGCCTGAGCACGAGAACCGGATCAG...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTGATCCGGTTCTCGTaGTCAGGCTTGGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSLIRFS*SGLAST
Trigger: GGTGCTGGCCAAGCCTGAGCACGAGAACCGGATCAG...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCGTTCCCCAGTGTGTTTaGAATGCCTGTCTTCACGTT +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLVPQCV*NACLHV
Trigger: AACGTGAAGACAGGCATTGCAAACACACTGGGGAAC...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGTGTAGGAAGACCTTCTaGTCCCTCCTCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVCRKTF*SLLSVS
Trigger: GCTCACAGAGAGGAGGGAGCAGAAGGTCTTCCTACA...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAACTGGGAAGTGACTCCTaGCTCAAATGTGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: VSQAVNSVGHTEARPFPELGSDS*LKCGKD
Trigger: GTCTTTGCCACATTTGAGGCAGGAGTCACTTCCCAG...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTATGCTGATGAGGATGTaGTGGTCTAGCAGGTACTCA +
Preference number: 4 (lower is better)
Translates to: PRASWGPRLFVARLVCVFMLMRM*WSSRYS
Trigger: TGAGTACCTGCTAGACCAGCACATCCTCATCAGCAT...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAACCGAAGGGCAATaGAGCCCTCGCCATAGGATT +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVLTEGQ*SPRHRI
Trigger: AATCCTATGGCGAGGGCTGCATTGCCCTTCGGTTAG...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCCTAGTGACTTCCCACTaGTTCATGGGGTCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GHTEARPFPENTKPCIGSLVTSH*FMGSWL
Trigger: CAGCCACGACCCCATGAAGCAGTGGGAAGTCACTAG...GCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGATCAGGGGACAAGGTCTaGTTCACGTGCAGGGGCATT +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGSGDKV*FTCRGI
Trigger: AATGCCCCTGCACGTGAAGCAGACCTTGTCCCCTGA...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCAACTGCATGGCAGTCCTaGCTAGAGGCCCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPTAWQS*LEALVA
Trigger: GGCCACCAGGGCCTCTAGGCAGGACTGCCATGCAGT...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCACCCAGACTGTTTGTTaGCCGTCTGGTGTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSTQTVC*PSGVRF
Trigger: AAAACGCACACCAGACGGGCAACAAACAGTCTGGGT...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CGAACACACACCGTTTTAAACTGGTGGGTTTGGGCACGTGGTTTTAGGTGGCTAAGCCAGGTAGATCCCTaGTCTCAGCCTAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: RTHTVLNWWVWARGFRWLSQVDP*SQPSHA
Trigger: GGCATGGCTAGGCTGAGAGCAGGGATCTACCTGGCT...TAGCCACCTAAAACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCTCCCTTCTCATGGAGCAGTTCCCAGGACCATCACTCGCATGTGTGCACATGCCATCACTCGCATGTGTaGACATGCATGCGTTCACAC +
Preference number: 4 (lower is better)
Translates to: SPFSWSSSQDHHSHVCTCHHSHV*TCMRSH
Trigger: GTGTGAACGCATGCATGTGCACACATGCGAGTGATG...GCATGTGCACACATGCGAGTGATGGTCCTGGGAACTGCTCCATGAGAAGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR CCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGTGGAATGACCGGCTCTaGAGACGTCAGGAGAGTTGT +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVWNDRL*RRQESC
Trigger: ACAACTCTCCTGACGTCTCCAGAGCCGGTCATTCCA...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CCA 90 bp TTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCCAGCCCTCTCCTTCCTaGCAACTGGTCGCAGCGTAC +
Preference number: 4 (lower is better)
Translates to: FIGYADFHHGNVGCIPFCQPSPS*QLVAAY
Trigger: GTACGCTGCGACCAGTTGCCAGGAAGGAGAGGGCTG...GCAGAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGCGTCCTTGCCTGTCCTaGAAAGCAGCTCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: WRIGADFLLLPTKELRSQRPCLS*KAAPPP
Trigger: AGGCGGAGGAGCTGCTTTCCAGGACAGGCAAGGACG...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACACGTATGCCCGGGAGATaGACTCGCTGGCACGCACGA +
Preference number: 4 (lower is better)
Translates to: GHPDMTNVRKALSTALGTRMPGR*TRWHAR
Trigger: TCGTGCGTGCCAGCGAGTCCATCTCCCGGGCATACG...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTTCTGGAAGCCCACTaGTGTCCATGCTTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVLLEAH*CPCFAV
Trigger: GACTGCAAAGCATGGACACCAGTGGGCTTCCAGAAG...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGACCCGGGGAGAGCTGCTaGTCAAATAACCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGPGESC*SNNLCR
Trigger: TCTGCAGAGGTTATTTGACCAGCAGCTCTCCCCGGG...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTCCCGGGGAGAGCTGCTaGTCAAATAACCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGPGESC*SNNLCR
Trigger: TCTGCAGAGGTTATTTGACCAGCAGCTCTCCCCGGG...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGAGCCTTCTCTCTTTTTaGAGTCAGCAAAAACATATT +
Preference number: 4 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQSLLSF*SQQKHI
Trigger: AATATGTTTTTGCTGACTCCAAAAAGAGAGAAGGCT...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGATGCTGCTTGATTTTCTaGATGATGGTTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: AQALASLAQAEARSLHWRCCLIF*MMVSAS
Trigger: GGAGGCAGAAACCATCATCCAGAAAATCAAGCAGCA...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGACTCAAAACGGTAGGTTaGGGCAAACGTGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: AQALASLAQAEARSLHWRLKTVG*GKRDFF
Trigger: GAAGAAATCACGTTTGCCCCAACCTACCGTTTTGAG...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTGCAAAGACAGGGCTGTaGTCACTCGTCATGATGTCG +
Preference number: 4 (lower is better)
Translates to: VARLVCVFLPASALGAKSAKTGL*SLVMMS
Trigger: CGACATCATGACGAGTGACCACAGCCCTGTCTTTGC...AGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGGAGGGCACTGGGCTTCTTAATGCTTTCACCCCTCCGAACACACACCGTTTTGCAAAGACAGGGCTGTaGTCACTCGTCATGATGTCG +
Preference number: 4 (lower is better)
Translates to: QEGTGLLNAFTPPNTHRFAKTGL*SLVMMS
Trigger: CGACATCATGACGAGTGACCACAGCCCTGTCTTTGC...AAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAGAAGCCCAGTGCCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAGCAAAGACAGGGCTGTaGTCACTCGTCATGATGTCG +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTAKTGL*SLVMMS
Trigger: CGACATCATGACGAGTGACCACAGCCCTGTCTTTGC...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACACTCCTGCCTCAAATGTaGCAAAGACAGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTLLPQM*QRQGCG
Trigger: ACCACAGCCCTGTCTTTGCCACATTTGAGGCAGGAG...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCAACTCAATCTGTCCTTaGCTGTCAACAGTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSNSICP*LSTVPG
Trigger: TCCCGGGACTGTTGACAGCCAAGGACAGATTGAGTT...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGACTCCAGGTAGAATTTaGTCTGGGACTTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KYQERAGDPDCLLPVWCATPGRI*SGTWSS
Trigger: TGAAGACCAAGTCCCAGACCAAATTCTACCTGGAGT...CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGGCAGCTGCGTTTCTGTaGCCTCTAACCGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPAAAFL*PLTEGQ
Trigger: TTGCCCTTCGGTTAGAGGCCACAGAAACGCAGCTGC...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTAGCTTGATCTCCCCCTaGAAGTGGCCTGTCAACTCC +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPSLISP*KWPVNS
Trigger: GGAGTTGACAGGCCACTTCCAGGGGGAGATCAAGCT...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTAGCTTGATCTCCCCCTaGAAGTGGCCTGTCAACTCC +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSSLISP*KWPVNS
Trigger: GGAGTTGACAGGCCACTTCCAGGGGGAGATCAAGCT...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGTTGACTCCTGTGTCCTaGGAGGGAGACCCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: HTEARPFPENTKPCIGSWLTPVS*EGDPGL
Trigger: CAAACCGGGGTCTCCCTCCCAGGACACAGGAGTCAA...CCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTATTTTGGGGGATTCCTaGTCCTTCCTGGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPILGDS*SFLGAG
Trigger: GCCTGCTCCCAGGAAGGACCAGGAATCCCCCAAAAT...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCCCTTCCGCGGCATTTTaGGGGATTCCTGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGPSAAF*GIPGPS
Trigger: GGAAGGACCAGGAATCCCCCAAAATGCCGCGGAAGG...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGCCTTCCGCGGCATTTTaGGGGATTCCTGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: HTEARPFPENTKPCIGSWPSAAF*GIPGPS
Trigger: GGAAGGACCAGGAATCCCCCAAAATGCCGCGGAAGG...CCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCCGCGATCAGCCTCCTaGGCTTTGGTGAGCACGATG +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSPRSAS*ALVSTM
Trigger: CATCGTGCTCACCAAAGCCCAGGAGGCTGATCGCGG...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAAGCCGGCACCGGGGCCTaGGAGCTGACCGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQAGTGA*ELTGVL
Trigger: CAAGACCCCGGTCAGCTCCCAGGCCCCGGTGCCGGC...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCGTGGGCGGGGTCTGCTaGTTGATTTCCGATCTGGAA +
Preference number: 4 (lower is better)
Translates to: GMWGAFPSAFTHTTGFSSVGGVC*LISDLE
Trigger: TTCCAGATCGGAAATCAACCAGCAGACCCCGCCCAC...GGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGGAGGGCTTCACTGCATaGCAGTCCTGCCTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLREGFTA*QSCLEA
Trigger: GGCCTCTAGGCAGGACTGCCATGCAGTGAAGCCCTC...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAAGTACCAAGAGCGAGCTaGGGACCCAGACTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: ISTLKSALQFLSSEWRPQVPRAS*GPRLFV
Trigger: AACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTAC...TTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTTCCTTTCTTCAGAATaGCGCCCTCAACGAGGCACT +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSFLSSE*RPQRGT
Trigger: AGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAA...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTGCACGTGGTTTTAGGTaGCTAGAGCCTCAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSARGFR*LEPQLS
Trigger: CGAGAGCTGAGGCTCTAGCCACCTAAAACCACGTGC...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCGCACGTGGTTTTAGGTaGCTAGAGCCTCAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: GHTEARPFPENTKPCIGSARGFR*LEPQLS
Trigger: CGAGAGCTGAGGCTCTAGCCACCTAAAACCACGTGC...GCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTGCCAGATCTCTCCACTaGAGAATAGGAGCTGATTTC +
Preference number: 4 (lower is better)
Translates to: PRASWGPRLFVARLVCVFARSLH*RIGADF
Trigger: GAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGC...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTCGATGGAATACATGTTaGGGGGCTTGGCTTAACTGT +
Preference number: 4 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFRWNTC*GAWLNC
Trigger: ACAGTTAAGCCAAGCCCCCCAACATGTATTCCATCG...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCGATGGAATACATGTTaGGGGGCTTGGCTTAACTGT +
Preference number: 4 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQRWNTC*GAWLNC
Trigger: ACAGTTAAGCCAAGCCCCCCAACATGTATTCCATCG...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAATCCATCATGGGAATGTaGGGTGCATTCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VSQAVNSVGHTEARPFPESIMGM*GAFPSA
Trigger: TGCAGAAGGGAATGCACCCCACATTCCCATGATGGA...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGCGCAGACTTCCATCATaGGAATGTGGGGTGCATTCC +
Preference number: 4 (lower is better)
Translates to: LAQAEARSLHWRIGADFLRRLPS*ECGVHS
Trigger: GGAATGCACCCCACATTCCCATGATGGAAGTCTGCG...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CACAGCCCCGCCTTTCTTCCTTTTAACAACTGCTGCAGAGGCAATGCAGGGTCATGGGACAGGCAGACCTaGGTTCAAATCCTGACTCTC +
Preference number: 4 (lower is better)
Translates to: HSPAFLPFNNCCRGNAGSWDRQT*VQILTL
Trigger: GAGAGTCAGGATTTGAACCCAGGTCTGCCTGTCCCA...TGACCCTGCATTGCCTCTGCAGCAGTTGTTAAAAGGAAGAAAGGCGGGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR TCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCCACCAGCTTAACTaGCTGACTTCCTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWCHQLN*LTSCFR
Trigger: CCTGAAACAGGAAGTCAGTCAGTTAAGCTGGTGGCA...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR TCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCGCTGGTCCAGCTTGGTaGAGAACCTCATGGAGACGC +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPAGPAW*RTSWRR
Trigger: GCGTCTCCATGAGGTTCTTCACCAAGCTGGACCAGC...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGTCAGTTTCTTCAGGTaGGGAAGACTGCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGVSFFR*GRLLDP
Trigger: AGGGTCCAGCAGTCTTCCTCACCTGAAGAAACTGAC...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGCTTGGACACCATGTTaGTGGGATTGGCCTCACCAG +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCIAWTPC*WDWPHQ
Trigger: CTGGTGAGGCCAATCCCATCAACATGGTGTCCAAGC...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGGGGCTCCGGCTGCTCTaGGTGCTTGTTCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRGLRLL*VLVLHL
Trigger: CAGATGAAGAACAAGCACTCAGAGCAGCCGGAGCCC...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGCTTGCAGGGAGTGTTTaGGGATCTCCAGCCACTCCT +
Preference number: 4 (lower is better)
Translates to: HTEARPFPENTKPCIGSWLAGSV*GSPATP
Trigger: AGGAGTGGCTGGAGATCCTCAAACACTCCCTGCAAG...CCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCCAGTACAGATGTGGCTaGTCCGGTTCTCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGQYRCG*SGSRAQ
Trigger: CTGAGCACGAGAACCGGATCAGCCACATCTGTACTG...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAAAGTCAAGTGGCTGTTaGCGAACCCTAAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTKSSGC*RTLRRF
Trigger: GAACCTCCTTAGGGTTCGTCAACAGCCACTTGACTT...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTAAGTCAAGTGGCTGTTaGCGAACCCTAAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: PRLFVARLVCVFLPASALKSSGC*RTLRRF
Trigger: GAACCTCCTTAGGGTTCGTCAACAGCCACTTGACTT...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTAGGTGCGTGAAGCGGTaGGTGATGTTAAAGGGACTC +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPRCVKR*VMLKGL
Trigger: GAGTCCCTTTAACATCACTCACCGCTTCACGCACCT...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGTGGTCACTCGTCATaGTGTCGCTGGTACTGCCAT +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPCGHSS*CRWYCH
Trigger: ATGGCAGTACCAGCGACATCATGACGAGTGACCACA...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCAACTCCCCATGGTGGGTaGGAGGCGTGTAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPTPHGG*EACRWA
Trigger: TGCCCATCTACACGCCTCTCACCCACCATGGGGAGT...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCTCCCTCGTCTTGCCCTaGGAGGTCTGCAGCTTGATC +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPSLVLP*EVCSLI
Trigger: GATCAAGCTGCAGACCTCTCAGGGCAAGACGAGGGA...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TCTCGAGGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTCCGATCTGGAAGGCTTaGTGGGCCTCTTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: SRGHPDMTNVRKALSTALPIWKA*WASWPA
Trigger: TGCCGGCCAAGAGGCCCATCAAGCCTTCCAGATCGG...AAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACCTCGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGGCGGGGTCTGCTGGTTaGTTTCCGATCTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRAGSAG*FPIWKA
Trigger: AGCCTTCCAGATCGGAAATCAACCAGCAGACCCCGC...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCAAGTCTCACAGGCAGTaGACTCTGTGGGCCACACAG +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGKSHRQ*TLWATQ
Trigger: CTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTT...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAAAGTCTCACAGGCAGTaGACTCTGTGGGCCACACAG +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCIKSHRQ*TLWATQ
Trigger: CTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTT...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGAGCACTTGGCACATCATaGGTGTTCGATCCATGTGGC +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGALGTS*VFDPCG
Trigger: GCCACATGGATCGAACACTCATGATGTGCCAAGTGC...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACACTGGAGAATAGGAGCTaGTTTCCTGCTCCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTLENRS*FPAPSN
Trigger: GTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAG...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCTCGAGGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTCCCTCCACTGCAACCTaGCGCCCGTTGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: SRGHPDMTNVRKALSTALPSTAT*RPLPLG
Trigger: ACCAAGAGGCAACGGGCGGCAGGTTGCAGTGGAGGG...AAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACCTCGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGGGAAGCTCCCGTCCTTaGCTGTCCTGGAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRGSSRP*LSWKAA
Trigger: AGCTGCTTTCCAGGACAGGCAAGGACGGGAGCTTCC...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACAAGCGGCACAGGGTATTaGAGATGGGTCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GHPDMTNVRKALSTALGTSGTGY*RWVTSP
Trigger: GGGGCTGGTGACCCATCTGCAATACCCTGTGCCGCT...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCCCTGGGCGAGCTGAGTaGTTAAATAATCTTGGATGG +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSPGRAE*LNNLGW
Trigger: CCATCCAAGATTATTTAAGCACTCAGCTCGCCCAGG...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACATGGTCAAATAACCTCTaGAGAGACTCCAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTWSNNL*RDSRDG
Trigger: CCCATCCCTGGAGTCTCTGCAGAGGTTATTTGACCA...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCAGGCCCGGGGAGAGCTaGTGGTCAAATAACCTCTGC +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPRPGES*WSNNLC
Trigger: GCAGAGGTTATTTGACCAGCAGCTCTCCCCGGGCCT...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAAAATCCCCAGAGACTCTaGCTTCACCTCAAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: ISTLKSALQFLSSEWRPQNPQRL*LHLKGD
Trigger: GTCACCTTTGAGGTGAAGGCAGAGTCTCTGGGGATT...TTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGGAGGGCACTGGGCTTCTTAATGCTTTCACCCCTCCGAACACACACCGTTTTTTGTTCTTCATCTGCTaGAGGAGCTGGCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: QEGTGLLNAFTPPNTHRFLFFIC*RSWQKP
Trigger: AGGCTTCTGCCAGCTCCTGCAGCAGATGAAGAACAA...AAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAGAAGCCCAGTGCCCTCCTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAATGTCGGGCTCCGGCTaGTCTGAGTGCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCIMSGSG*SECLFF
Trigger: GAAGAACAAGCACTCAGAGCAGCCGGAGCCCGACAT...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CACTGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCTCCCGCGTCTTTCCCTaGCCCTTGGAGAGAAACCAG +
Preference number: 4 (lower is better)
Translates to: HWRIGADFLLLPTKELRSSRVFP*PLERNQ
Trigger: CTGGTTTCTCTCCAAGGGGCAGGGAAAGACGCGGGA...GCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGAGGGGGTCCTCTTGGGTaGCGATCACGTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGGGPLG*RSRKCH
Trigger: ATGACATTTACGTGATCGGCACCCAAGAGGACCCCC...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCTGGCCAGCACCACGATaGGGATGTTCCAGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSWPAPR*GCSRAC
Trigger: ACACGCTCTGGAACATCCGCATCGTGGTGCTGGCCA...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTTCTGCGTACTGCTGCTaGTTGATTTTCTGGATGATG +
Preference number: 4 (lower is better)
Translates to: PRASWGPRLFVARLVCVFSAYCC*LIFWMM
Trigger: CATCATCCAGAAAATCAAGCAGCAGCAGTACGCAGA...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCAGGTCTGCGTACTGCTaGTGCTTGATTTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSRSAYC*CLIFWM
Trigger: CATCCAGAAAATCAAGCAGCAGCAGTACGCAGACCT...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGAGGAGGTCTGCGTACTaGTGCTGCTTGATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWRRSAY*CCLIFW
Trigger: CCAGAAAATCAAGCAGCAGCAGTACGCAGACCTCCT...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGAGGAGGTCTGCGTACTaGTGCTGCTTGATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVRRSAY*CCLIFW
Trigger: CCAGAAAATCAAGCAGCAGCAGTACGCAGACCTCCT...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGTGGGACAGGAGGTCTaGGTACTGCTGCTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: HTEARPFPENTKPCIGSWVGQEV*VLLLLD
Trigger: ATCAAGCAGCAGCAGTACGCAGACCTCCTGTCCCAC...CCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCGTGGGACAGGAGGTCTaGGTACTGCTGCTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGVGQEV*VLLLLD
Trigger: ATCAAGCAGCAGCAGTACGCAGACCTCCTGTCCCAC...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGTAGGAAGACCTTCTaGTCCCTCCTCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPCRKTF*SLLSVS
Trigger: GCTCACAGAGAGGAGGGAGCAGAAGGTCTTCCTACA...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATGTAGGAAGACCTTCTaGTCCCTCCTCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGCRKTF*SLLSVS
Trigger: GCTCACAGAGAGGAGGGAGCAGAAGGTCTTCCTACA...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTCTGGGAAGTGACTCCTaGCTCAAATGTGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTLGSDS*LKCGKD
Trigger: GTCTTTGCCACATTTGAGGCAGGAGTCACTTCCCAG...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGCTAACCGAAGGGCAATaGAGCCCTCGCCATAGGATT +
Preference number: 4 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPLTEGQ*SPRHRI
Trigger: AATCCTATGGCGAGGGCTGCATTGCCCTTCGGTTAG...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCAGGCAGCGTGTCCCCTaGGTTCTTCCCCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFRQRVP*VLPQVT
Trigger: AGTGACCTGGGGAAGAACGCAGGGGACACGCTGCCT...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACAGGGGTGGGCGGGGTCTaGTGGTTGATTTCCGATCTG +
Preference number: 4 (lower is better)
Translates to: GHPDMTNVRKALSTALGTGVGGV*WLISDL
Trigger: CAGATCGGAAATCAACCAGCAGACCCCGCCCACCCC...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ATTATTATCTATATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATCGCGGCCCTTGGAGTaGTGGAGGTGCAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: IIIYISTLKSALQFLSSESRPLE*WRCSTA
Trigger: GGCGGTGCTGCACCTCCAGCACTCCAAGGGCCGCGA...TTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATAGATAATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAACCTCCGGCCGGTGCTTaGCGTGATGCGGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQPPAGA*RDAGAR
Trigger: CCGAGCTCCCGCATCACGGCAAGCACCGGCCGGAGG...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCTCGAGGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTACTGCATGGCAGTCCTaGCTAGAGGCCCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SRGHPDMTNVRKALSTALTAWQS*LEALVA
Trigger: GGCCACCAGGGCCTCTAGGCAGGACTGCCATGCAGT...AAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACCTCGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCGAAAACACAAAGCCTTaGATAGGAAGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSENTKP*IGSWAG
Trigger: TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTC...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGTTGCCCGTCTGGTGTaGGTTTTTCTTCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGVARLV*VFLPAS
Trigger: TGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAAACCCAGACTGTTTGTTaGCCGTCTGGTGTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: ISTLKSALQFLSSEWRPQTQTVC*PSGVRF
Trigger: AAAACGCACACCAGACGGGCAACAAACAGTCTGGGT...TTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAACCCAGACTGTTTGTTaGCCGTCTGGTGTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTTQTVC*PSGVRF
Trigger: AAAACGCACACCAGACGGGCAACAAACAGTCTGGGT...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCAGCCAGGTAGATCCCTaGTCTCAGCCTAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPSQVDP*SQPSHA
Trigger: GGCATGGCTAGGCTGAGAGCAGGGATCTACCTGGCT...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGCATGGGAATGTGGGGTaGATTCCCTTCTGCATTCAC +
Preference number: 4 (lower is better)
Translates to: LAQAEARSLHWRIGADFLHGNVG*IPFCIH
Trigger: GTGAATGCAGAAGGGAATGCACCCCACATTCCCATG...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACATGGGAATGTGGGGTaGATTCCCTTCTGCATTCAC +
Preference number: 4 (lower is better)
Translates to: ISTLKSALQFLSSEWRPQHGNVG*IPFCIH
Trigger: GTGAATGCAGAAGGGAATGCACCCCACATTCCCATG...TTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACAGGTGGGCCAGAGAAGTaGTTCTTCTGCGGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: GHPDMTNVRKALSTALGTGGPEK*FFCGRA
Trigger: AGCACGGCCGCAGAAGAACCACTTCTCTGGCCCACC...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CCA 90 bp ATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACTCCTTCCTGGCAACTaGTCGCAGCGTACAATTGAA +
Preference number: 4 (lower is better)
Translates to: ISTLKSALQFLSSEWRPQLLPGN*SQRTIE
Trigger: TTCAATTGTACGCTGCGACCAGTTGCCAGGAAGGAG...TTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGACAGGGTATTGCAGATaGGTCACCAGCCCCATGTTT +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWTGYCR*VTSPMF
Trigger: AAACATGGGGCTGGTGACCCATCTGCAATACCCTGT...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTACAGGGTATTGCAGATaGGTCACCAGCCCCATGTTT +
Preference number: 4 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTTGYCR*VTSPMF
Trigger: AAACATGGGGCTGGTGACCCATCTGCAATACCCTGT...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGTGGCCTCACAGGAGCTaGCAGTCAGCGGGATGTTTC +
Preference number: 4 (lower is better)
Translates to: WRIGADFLLLPTKELRSQWPHRS*QSAGCF
Trigger: GAAACATCCCGCTGACTGCCAGCTCCTGTGAGGCCA...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTATGCTTTGCAGTCGCTaGAACAATGTCTCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VARLVCVFLPASALGAKSMLCSR*NNVSER
Trigger: CCTCTCCGAGACATTGTTCCAGCGACTGCAAAGCAT...AGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTTCTGGAAGCCCACTaGTGTCCATGCTTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: GMWGAFPSAFTHTTGFSSLLEAH*CPCFAV
Trigger: GACTGCAAAGCATGGACACCAGTGGGCTTCCAGAAG...GGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGACTTCTGGAAGCCCACTaGTGTCCATGCTTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGLLEAH*CPCFAV
Trigger: GACTGCAAAGCATGGACACCAGTGGGCTTCCAGAAG...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCGGTGAGGAAGACTGCTaGACCCTGTCTTCACAAATT +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSGEEDC*TLSSQI
Trigger: AATTTGTGAAGACAGGGTCCAGCAGTCTTCCTCACC...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCCAGAGACTCCAGGGATaGGAGGGTCCGGATGACTTC +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPQRLQG*EGPDDF
Trigger: GAAGTCATCCGGACCCTCCCATCCCTGGAGTCTCTG...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGAACAGGCTTGTCAGTTaGCTGAGCTTGGACACCATG +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWNRLVS*LSLDTM
Trigger: CATGGTGTCCAAGCTCAGCCAACTGACAAGCCTGTT...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCATCTCGTGCTCAGGCTTaGCCAGCACCACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPSRAQA*PAPRCG
Trigger: TCCGCATCGTGGTGCTGGCCAAGCCTGAGCACGAGA...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGTTGTCAGTACAGATGTaGCTGATCCGGTTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: LAQAEARSLHWRIGADFLLSVQM*LIRFSC
Trigger: GCACGAGAACCGGATCAGCCACATCTGTACTGACAA...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCTGCTGCTTGATTTTCTaGATGATGGTTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTCCLIF*MMVSAS
Trigger: GGAGGCAGAAACCATCATCCAGAAAATCAAGCAGCA...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACAGTGAGCAGCTGGTCGTaGGACAGGAGGTCTGCGTAC +
Preference number: 4 (lower is better)
Translates to: GHPDMTNVRKALSTALGTVSSWS*DRRSAY
Trigger: GTACGCAGACCTCCTGTCCCACGACCAGCTGCTCAC...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTCTCAAAACGGTAGGTTaGGGCAAACGTGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFLKTVG*GKRDFF
Trigger: GAAGAAATCACGTTTGCCCCAACCTACCGTTTTGAG...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACACTGTCGCTTTCTGCTTaGTGTAGGCGTATTTGTCCC +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTLSLSA*CRRICP
Trigger: GGGACAAATACGCCTACACCAAGCAGAAAGCGACAG...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACTGTCGCTTTCTGCTTaGTGTAGGCGTATTTGTCCC +
Preference number: 4 (lower is better)
Translates to: ISTLKSALQFLSSEWRPQLSLSA*CRRICP
Trigger: GGGACAAATACGCCTACACCAAGCAGAAAGCGACAG...TTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAGCAAAGACAGGGCTGTaGTCACTCGTCATGATGTCG +
Preference number: 4 (lower is better)
Translates to: VGHTEARPFPENTKPCIGAKTGL*SLVMMS
Trigger: CGACATCATGACGAGTGACCACAGCCCTGTCTTTGC...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCAAAGACAGGGCTGTaGTCACTCGTCATGATGTCG +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGAKTGL*SLVMMS
Trigger: CGACATCATGACGAGTGACCACAGCCCTGTCTTTGC...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGACTCCTGCCTCAAATGTaGCAAAGACAGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGLLPQM*QRQGCG
Trigger: ACCACAGCCCTGTCTTTGCCACATTTGAGGCAGGAG...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAAAACTCAATCTGTCCTTaGCTGTCAACAGTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: ISTLKSALQFLSSEWRPQNSICP*LSTVPG
Trigger: TCCCGGGACTGTTGACAGCCAAGGACAGATTGAGTT...TTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCATTTGGTCTGGGACTTaGTCTTCAATGTGGCATAGC +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLIWSGT*SSMWHS
Trigger: GCTATGCCACATTGAAGACCAAGTCCCAGACCAAAT...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTACTCCAGGTAGAATTTaGTCTGGGACTTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFTPGRI*SGTWSS
Trigger: TGAAGACCAAGTCCCAGACCAAATTCTACCTGGAGT...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGCTGCGTTTCTGTaGCCTCTAACCGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: HTEARPFPENTKPCIGSWAAAFL*PLTEGQ
Trigger: TTGCCCTTCGGTTAGAGGCCACAGAAACGCAGCTGC...CCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTCTTCAGGGTCTTTaGCCCACTGGATTCATCACG +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGALQGL*PTGFIT
Trigger: CGTGATGAATCCAGTGGGCCAAAGACCCTGAAGAGC...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGAGGGTAAAAACTTCTTaGGTGATATGGGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVRVKTS*VIWAAG
Trigger: GCCAGCCGCCCATATCACCCAAGAAGTTTTTACCCT...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTAGGGTAAAAACTTCTTaGGTGATATGGGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTRVKTS*VIWAAG
Trigger: GCCAGCCGCCCATATCACCCAAGAAGTTTTTACCCT...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCTTGACTCCTGTGTCCTaGGAGGGAGACCCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSLTPVS*EGDPGL
Trigger: CAAACCGGGGTCTCCCTCCCAGGACACAGGAGTCAA...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCTCTTCCCCAGGTCACTaGGCCTTGACTCCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: FIGYADFHHGNVGCIPFCSSPGH*ALTPVS
Trigger: GGACACAGGAGTCAAGGCCCAGTGACCTGGGGAAGA...GCAGAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCTCTTCCCCAGGTCACTaGGCCTTGACTCCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPSSPGH*ALTPVS
Trigger: GGACACAGGAGTCAAGGCCCAGTGACCTGGGGAAGA...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCTTCCGCGGCATTTTaGGGGATTCCTGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRPSAAF*GIPGPS
Trigger: GGAAGGACCAGGAATCCCCCAAAATGCCGCGGAAGG...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCACCGCGATCAGCCTCCTaGGCTTTGGTGAGCACGATG +
Preference number: 4 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPPRSAS*ALVSTM
Trigger: CATCGTGCTCACCAAAGCCCAGGAGGCTGATCGCGG...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGTCTTGGGCTTCCCTTaGCTCTTGTCCCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSVLGFP*LLSPPA
Trigger: GGCCGGCGGGGACAAGAGCCAAGGGAAGCCCAAGAC...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAATGTTTGTTGCCCGTCTaGTGTGCGTTTTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VSQAVNSVGHTEARPFPECLLPV*CAFFFQ
Trigger: CTGGAAGAAAAACGCACACCAGACGGGCAACAAACA...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTACCGTTTTAAACTGGTaGGTTTGGGCACGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: PRASWGPRLFVARLVCVFTVLNW*VWARGF
Trigger: AAAACCACGTGCCCAAACCCACCAGTTTAAAACGGT...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTACCGTTTTAAACTGGTaGGTTTGGGCACGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFTVLNW*VWARGF
Trigger: AAAACCACGTGCCCAAACCCACCAGTTTAAAACGGT...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACATCCATCATGGGAATGTaGGGTGCATTCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTSIMGM*GAFPSA
Trigger: TGCAGAAGGGAATGCACCCCACATTCCCATGATGGA...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGACGCAGACTTCCATCATaGGAATGTGGGGTGCATTCC +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGRRLPS*ECGVHS
Trigger: GGAATGCACCCCACATTCCCATGATGGAAGTCTGCG...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCATGGAGCAGTTCCCAGGACCATCACTCGCATGTGTGCACATGCATGCGTTCAGGCAGGCAGATCACCTaGCGAAACTCAGTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SWSSSQDHHSHVCTCMRSGRQIT*RNSVAK
Trigger: TTTTGCAACTGAGTTTCGCCAGGTGATCTGCCTGCC...TGAACGCATGCATGTGCACACATGCGAGTGATGGTCCTGGGAACTGCTCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR CCA 90 bp TCTTCTTCCTCTGGGACTGACACTAGACTAAGTTTATCCACAGCCCCGCCTTTCGTAATCCCAGAACTTTaGGAGGCCCAGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SSSSGTDTRLSLSTAPPFVIPEL*EAQAGR
Trigger: TCTGCCTGCCTGGGCCTCCCAAAGTTCTGGGATTAC...GAAAGGCGGGGCTGTGGATAAACTTAGTCTAGTGTCAGTCCCAGAGGAAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR TCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCGTCGCAGCGTACAATTaGAGTGTCCAGTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSVAAYN*SVQWQL
Trigger: CAGCTGCCACTGGACACTTCAATTGTACGCTGCGAC...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR TCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCGTCGCAGCGTACAATTaGAGTGTCCAGTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPVAAYN*SVQWQL
Trigger: CAGCTGCCACTGGACACTTCAATTGTACGCTGCGAC...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR TCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTACCAGCTTAACTGACTaGCTTCCTGTTTCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGTSLTD*LPVSGA
Trigger: AGCGCCTGAAACAGGAAGTCAGTCAGTTAAGCTGGT...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR TCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTTGCCACCAGCTTAACTaGCTGACTTCCTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSCHQLN*LTSCFR
Trigger: CCTGAAACAGGAAGTCAGTCAGTTAAGCTGGTGGCA...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR TCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCCGGATGCCTGAACAGTaGATTTATCATCTTCATTGG +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLRMPEQ*IYHLHW
Trigger: CCAATGAAGATGATAAATTCACTGTTCAGGCATCCG...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGATCGGGGATTCTCGTTTaGAAAAGGAACCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGSGILV*KRNLLG
Trigger: GCCAAGGAGGTTCCTTTTTCAAACGAGAATCCCCGA...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGTTGAGCTGCATTTTCTaGGGAATCCCCAGAGACTCT +
Preference number: 4 (lower is better)
Translates to: LAQAEARSLHWRIGADFLLSCIF*GIPRDS
Trigger: AGAGTCTCTGGGGATTCCTCAGAAAATGCAGCTCAA...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCAGTACAGATGTGGCTaGTCCGGTTCTCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSQYRCG*SGSRAQ
Trigger: CTGAGCACGAGAACCGGATCAGCCACATCTGTACTG...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCTTTCTTTTCACTTCCTaGAGTCAAGTGGCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTFLFTS*SQVAVD
Trigger: GTCAACAGCCACTTGACTTCAGGAAGTGAAAAGAAA...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGACTCCTTCCTGACTCTTaGCAAAACTCTCCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGLLPDS*QNSPSS
Trigger: GCTGCTTGGAGAGTTTTGTCAAGAGTCAGGAAGGAG...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCCTTCCTGACTCTTaGCAAAACTCTCCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSLLPDS*QNSPSS
Trigger: GCTGCTTGGAGAGTTTTGTCAAGAGTCAGGAAGGAG...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGAAGTCTCACAGGCAGTaGACTCTGTGGGCCACACAG +
Preference number: 4 (lower is better)
Translates to: WRIGADFLLLPTKELRSQKSHRQ*TLWATQ
Trigger: CTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTT...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTGGAGAATAGGAGCTaGTTTCCTGCTCCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSLENRS*FPAPSN
Trigger: GTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAG...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGCACGCAGAGCGCGTATaGCCGGGAGATGGACTCGCT +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMHAERV*PGDGLA
Trigger: AGCGAGTCCATCTCCCGGGCATACGCGCTCTGCGTG...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCCTGGTGTCCATGCTTTaGAGTCGCTGGAACAATGTC +
Preference number: 4 (lower is better)
Translates to: GHTEARPFPENTKPCIGSLVSML*SRWNNV
Trigger: GACATTGTTCCAGCGACTGCAAAGCATGGACACCAG...GCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATCAGGTGAGGAAGACTaGTGGACCCTGTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGSGEED*WTLSSQ
Trigger: TTGTGAAGACAGGGTCCAGCAGTCTTCCTCACCTGA...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGCTCCATAGAGCTCCTTaGAGAGCAGTGTGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPLHRAP*RAVWSV
Trigger: AACTGACCACACTGCTCTGCAAGGAGCTCTATGGAG...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCTGTGACTTAATGAGCTaGAGGATTTTCTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLCDLMS*RIFLWL
Trigger: CAGCCACAAGAAAATCCTGCAGCTCATTAAGTCACA...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCATGTCGGGCTCCGGCTaGTCTGAGTGCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPMSGSG*SECLFF
Trigger: GAAGAACAAGCACTCAGAGCAGCCGGAGCCCGACAT...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCCAGTGTGTTTGCAATaGCTGTCTTCACGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVPVCLQ*LSSRCQ
Trigger: CTGACAACGTGAAGACAGGCATTGCAAACACACTGG...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCCAGTGTGTTTGCAATaGCTGTCTTCACGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: VARLVCVFLPASALGAKSPVCLQ*LSSRCQ
Trigger: CTGACAACGTGAAGACAGGCATTGCAAACACACTGG...AGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGTTCCCCAGTGTGTTTaGAATGCCTGTCTTCACGTT +
Preference number: 4 (lower is better)
Translates to: PRLFVARLVCVFLPASALVPQCV*NACLHV
Trigger: AACGTGAAGACAGGCATTGCAAACACACTGGGGAAC...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTGTTCCCCAGTGTGTTTaGAATGCCTGTCTTCACGTT +
Preference number: 4 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTVPQCV*NACLHV
Trigger: AACGTGAAGACAGGCATTGCAAACACACTGGGGAAC...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAAAGGTCTGCGTACTGCTaGTGCTTGATTTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: ISTLKSALQFLSSEWRPQRSAYC*CLIFWM
Trigger: CATCCAGAAAATCAAGCAGCAGCAGTACGCAGACCT...TTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAAGGTCTGCGTACTGCTaGTGCTTGATTTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTRSAYC*CLIFWM
Trigger: CATCCAGAAAATCAAGCAGCAGCAGTACGCAGACCT...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGGAGGTCTGCGTACTaGTGCTGCTTGATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: VGHTEARPFPENTKPCIGRRSAY*CCLIFW
Trigger: CCAGAAAATCAAGCAGCAGCAGTACGCAGACCTCCT...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGAGGAGGTCTGCGTACTaGTGCTGCTTGATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPRRSAY*CCLIFW
Trigger: CCAGAAAATCAAGCAGCAGCAGTACGCAGACCTCCT...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CGAACACACACCGTTTTAAACTGGTGGGTTTGGGCACGTGGTTTTAGGTGGCTATGTAGGAAGACCTTCTaGTCCCTCCTCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: RTHTVLNWWVWARGFRWLCRKTF*SLLSVS
Trigger: GCTCACAGAGAGGAGGGAGCAGAAGGTCTTCCTACA...TAGCCACCTAAAACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGCTGGGAAGTGACTCCTaGCTCAAATGTGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPLGSDS*LKCGKD
Trigger: GTCTTTGCCACATTTGAGGCAGGAGTCACTTCCCAG...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCCTAGTGACTTCCCACTaGTTCATGGGGTCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPLVTSH*FMGSWL
Trigger: CAGCCACGACCCCATGAAGCAGTGGGAAGTCACTAG...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGTCAGGGGACAAGGTCTaGTTCACGTGCAGGGGCATT +
Preference number: 4 (lower is better)
Translates to: WRIGADFLLLPTKELRSQSGDKV*FTCRGI
Trigger: AATGCCCCTGCACGTGAAGCAGACCTTGTCCCCTGA...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTCTCCAGGCTGTGGGCTaGTGGTCAGGGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSLQAVG*WSGDKV
Trigger: GACCTTGTCCCCTGACCAGCAGCCCACAGCCTGGAG...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGGAGTGCTGGAGGTaGAGCACCGCCGGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMLECWR*STAGLL
Trigger: CAAGAGCCCGGCGGTGCTGCACCTCCAGCACTCCAA...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTACTGCATGGCAGTCCTaGCTAGAGGCCCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSTAWQS*LEALVA
Trigger: GGCCACCAGGGCCTCTAGGCAGGACTGCCATGCAGT...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGACTGCATGGCAGTCCTaGCTAGAGGCCCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMTAWQS*LEALVA
Trigger: GGCCACCAGGGCCTCTAGGCAGGACTGCCATGCAGT...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAGAAAACACAAAGCCTTaGATAGGAAGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTENTKP*IGSWAG
Trigger: TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTC...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGTTGCCCGTCTGGTGTaGGTTTTTCTTCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCIVARLV*VFLPAS
Trigger: TGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGTTGCCCGTCTGGTGTaGGTTTTTCTTCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: HTEARPFPENTKPCIGSWVARLV*VFLPAS
Trigger: TGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC...CCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCTTCTTCCTCTGGGACTGACACTAGACTAAGTTTATCCACAGCCCCGCCTTTCGCACACACACACAAATaGACACGAACCCACGTGTGG +
Preference number: 4 (lower is better)
Translates to: SSSSGTDTRLSLSTAPPFAHTHK*TRTHVW
Trigger: CCACACGTGGGTTCGTGTGCATTTGTGTGTGTGTGC...GAAAGGCGGGGCTGTGGATAAACTTAGTCTAGTGTCAGTCCCAGAGGAAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR GCA 90 bp CACAGCCCCGCCTTTCTTCCTTTTAACAACTGCTGCAGAGGCAATGCAGGGTCACCTTTTAACAACTGCTaGAGAGGCAATGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: HSPAFLPFNNCCRGNAGSPFNNC*RGNAGS
Trigger: TGACCCTGCATTGCCTCTGCAGCAGTTGTTAAAAGG...TGACCCTGCATTGCCTCTGCAGCAGTTGTTAAAAGGAAGAAAGGCGGGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR GCA 90 bp TCATGGAGCAGTTCCCAGGACCATCACTCGCATGTGTGCACATGCATGCGTTCACTTCCTTTTAACAACTaGTGCAGAGGCAATGCAGGG +
Preference number: 4 (lower is better)
Translates to: SWSSSQDHHSHVCTCMRSLPFNN*CRGNAG
Trigger: CCCTGCATTGCCTCTGCAGCAGTTGTTAAAAGGAAG...TGAACGCATGCATGTGCACACATGCGAGTGATGGTCCTGGGAACTGCTCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR CCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCACGGGTGATGTTGCCATaGTTCCAGCAGGGGACCATG +
Preference number: 4 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPRVMLP*FQQGTM
Trigger: CATGGTCCCCTGCTGGAACCATGGCAACATCACCCG...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGCTTCTGGAAGCCCACTaGTGTCCATGCTTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: HTEARPFPENTKPCIGSWLLEAH*CPCFAV
Trigger: GACTGCAAAGCATGGACACCAGTGGGCTTCCAGAAG...CCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTTAAGATGCTCTTCTaGAAGCCCACTGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVLKMLF*KPTGVH
Trigger: ATGGACACCAGTGGGCTTCCAGAAGAGCATCTTAAG...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACTTAAGATGCTCTTCTaGAAGCCCACTGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: ISTLKSALQFLSSEWRPQLKMLF*KPTGVH
Trigger: ATGGACACCAGTGGGCTTCCAGAAGAGCATCTTAAG...TTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGGAGGGCACTGGGCTTCTTAATGCTTTCACCCCTCCGAACACACACCGTTTTGGTGAGGAAGACTGCTaGACCCTGTCTTCACAAATT +
Preference number: 4 (lower is better)
Translates to: QEGTGLLNAFTPPNTHRFGEEDC*TLSSQI
Trigger: AATTTGTGAAGACAGGGTCCAGCAGTCTTCCTCACC...AAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAGAAGCCCAGTGCCCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTCCTTGCAGAGCAGTGTaGTCAGTTTCTTCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGPCRAV*SVSSGE
Trigger: CTCACCTGAAGAAACTGACCACACTGCTCTGCAAGG...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTATGTTCCAGAGCGTGTaGATGGCGACTGTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: PRASWGPRLFVARLVCVFMFQSV*MATVLK
Trigger: TTTTAAAACAGTCGCCATCCACACGCTCTGGAACAT...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTCTTCCTGAAGTCAAGTaGCTGTTGACGAACCCTAAG +
Preference number: 4 (lower is better)
Translates to: PRLFVARLVCVFLPASALLPEVK*LLTNPK
Trigger: CTTAGGGTTCGTCAACAGCCACTTGACTTCAGGAAG...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACACTTCCTGAAGTCAAGTaGCTGTTGACGAACCCTAAG +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTLPEVK*LLTNPK
Trigger: CTTAGGGTTCGTCAACAGCCACTTGACTTCAGGAAG...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCCTCAAAACGGTAGGTTaGGGCAAACGTGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSLKTVG*GKRDFF
Trigger: GAAGAAATCACGTTTGCCCCAACCTACCGTTTTGAG...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGACTGTCGCTTTCTGCTTaGTGTAGGCGTATTTGTCCC +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGLSLSA*CRRICP
Trigger: GGGACAAATACGCCTACACCAAGCAGAAAGCGACAG...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCCTCCTGCCTCAAATGTaGCAAAGACAGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGLLPQM*QRQGCG
Trigger: ACCACAGCCCTGTCTTTGCCACATTTGAGGCAGGAG...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACATTCTTGGAGACAAACTaGGAAGTGACTCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTFLETN*EVTPAS
Trigger: TGAGGCAGGAGTCACTTCCCAGTTTGTCTCCAAGAA...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTTCTTGGAGACAAACTaGGAAGTGACTCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTFLETN*EVTPAS
Trigger: TGAGGCAGGAGTCACTTCCCAGTTTGTCTCCAAGAA...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CGAACACACACCGTTTTAAACTGGTGGGTTTGGGCACGTGGTTTTAGGTGGCTACTGATGAGGATGTGCTaGTCTAGCAGGTACTCAGGG +
Preference number: 4 (lower is better)
Translates to: RTHTVLNWWVWARGFRWLLMRMC*SSRYSG
Trigger: CCCTGAGTACCTGCTAGACCAGCACATCCTCATCAG...TAGCCACCTAAAACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCAATCTCCCCCTGGAAGTaGCCTGTCAACTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPISPWK*PVNSPW
Trigger: CCATGGGGAGTTGACAGGCCACTTCCAGGGGGAGAT...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CGAACACACACCGTTTTAAACTGGTGGGTTTGGGCACGTGGTTTTAGGTGGCTAGCTCTTCAGGGTCTTTaGCCCACTGGATTCATCACG +
Preference number: 4 (lower is better)
Translates to: RTHTVLNWWVWARGFRWLALQGL*PTGFIT
Trigger: CGTGATGAATCCAGTGGGCCAAAGACCCTGAAGAGC...TAGCCACCTAAAACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTAGGGTAAAAACTTCTTaGGTGATATGGGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPRVKTS*VIWAAG
Trigger: GCCAGCCGCCCATATCACCCAAGAAGTTTTTACCCT...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGATTTTGGGGGATTCCTaGTCCTTCCTGGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRILGDS*SFLGAG
Trigger: GCCTGCTCCCAGGAAGGACCAGGAATCCCCCAAAAT...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGGTGGGCGGGGTCTGCTaGTTGATTTCCGATCTGGAA +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRVGGVC*LISDLE
Trigger: TTCCAGATCGGAAATCAACCAGCAGACCCCGCCCAC...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGTTTGTTGCCCGTCTaGTGTGCGTTTTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTCLLPV*CAFFFQ
Trigger: CTGGAAGAAAAACGCACACCAGACGGGCAACAAACA...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGTTAAACTGGTGGGTTTaGGCACGTGGTTTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: LAQAEARSLHWRIGADFLLNWWV*ARGFRW
Trigger: CCACCTAAAACCACGTGCCCAAACCCACCAGTTTAA...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTCACACCGTTTTAAACTaGTGGGTTTGGGCACGTGGT +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGHTVLN*WVWARG
Trigger: ACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTG...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTGCCAGATCTCTCCACTaGAGAATAGGAGCTGATTTC +
Preference number: 4 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTARSLH*RIGADF
Trigger: GAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGC...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGGAGGGCACTGGGCTTCTTAATGCTTTCACCCCTCCGAACACACACCGTTTTCGATGGAATACATGTTaGGGGGCTTGGCTTAACTGT +
Preference number: 4 (lower is better)
Translates to: QEGTGLLNAFTPPNTHRFRWNTC*GAWLNC
Trigger: ACAGTTAAGCCAAGCCCCCCAACATGTATTCCATCG...AAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAGAAGCCCAGTGCCCTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCCGCAGACTTCCATCATaGGAATGTGGGGTGCATTCC +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGRRLPS*ECGVHS
Trigger: GGAATGCACCCCACATTCCCATGATGGAAGTCTGCG...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACATGGGGGCAGCTCGGGTaGAGACACGACACTTTCTAC +
Preference number: 4 (lower is better)
Translates to: GHPDMTNVRKALSTALGTWGQLG*RHDTFY
Trigger: GTAGAAAGTGTCGTGTCTCCACCCGAGCTGCCCCCA...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445964.6
ENST00000630854.3
CDS-3UTR CCA 90 bp GGGAGGCCCAGGCAGGCAGATCACCTGGCGAAACTCAGTTGCAAAACAAATTTAGGCAGGCAGATCACCTaGCGAAACTCAGTTGCAAAA +
Preference number: 4 (lower is better)
Translates to: GRPRQADHLAKLSCKTNLGRQIT*RNSVAK
Trigger: TTTTGCAACTGAGTTTCGCCAGGTGATCTGCCTGCC...TAAATTTGTTTTGCAACTGAGTTTCGCCAGGTGATCTGCCTGCCTGGGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR TCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCTCGGGGATTCTCGTTTaGAAAAGGAACCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGSGILV*KRNLLG
Trigger: GCCAAGGAGGTTCCTTTTTCAAACGAGAATCCCCGA...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CGAACACACACCGTTTTAAACTGGTGGGTTTGGGCACGTGGTTTTAGGTGGCTATCGGGGATTCTCGTTTaGAAAAGGAACCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RTHTVLNWWVWARGFRWLSGILV*KRNLLG
Trigger: GCCAAGGAGGTTCCTTTTTCAAACGAGAATCCCCGA...TAGCCACCTAAAACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAACTCAACGTCGACTTTaGGCTGCATTTTCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTTQRRL*AAFSEE
Trigger: TTCCTCAGAAAATGCAGCTCAAAGTCGACGTTGAGT...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTACTCAACGTCGACTTTaGGCTGCATTTTCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: VARLVCVFLPASALGAKSTQRRL*AAFSEE
Trigger: TTCCTCAGAAAATGCAGCTCAAAGTCGACGTTGAGT...AGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CGAACACACACCGTTTTAAACTGGTGGGTTTGGGCACGTGGTTTTAGGTGGCTAAAGTCAAGTGGCTGTTaGCGAACCCTAAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: RTHTVLNWWVWARGFRWLKSSGC*RTLRRF
Trigger: GAACCTCCTTAGGGTTCGTCAACAGCCACTTGACTT...TAGCCACCTAAAACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCAGGTGCGTGAAGCGGTaGGTGATGTTAAAGGGACTC +
Preference number: 4 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPRCVKR*VMLKGL
Trigger: GAGTCCCTTTAACATCACTCACCGCTTCACGCACCT...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCTGTGGTCACTCGTCATaGTGTCGCTGGTACTGCCAT +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPCGHSS*CRWYCH
Trigger: ATGGCAGTACCAGCGACATCATGACGAGTGACCACA...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCCTCCTTCCTGACTCTTaGCAAAACTCTCCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGLLPDS*QNSPSS
Trigger: GCTGCTTGGAGAGTTTTGTCAAGAGTCAGGAAGGAG...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTACTCCCCATGGTGGGTaGGAGGCGTGTAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSTPHGG*EACRWA
Trigger: TGCCCATCTACACGCCTCTCACCCACCATGGGGAGT...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CACTGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCGCACTTGGCACATCATaGGTGTTCGATCCATGTGGC +
Preference number: 4 (lower is better)
Translates to: HWRIGADFLLLPTKELRSALGTS*VFDPCG
Trigger: GCCACATGGATCGAACACTCATGATGTGCCAAGTGC...GCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCGCACTTGGCACATCATaGGTGTTCGATCCATGTGGC +
Preference number: 4 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPALGTS*VFDPCG
Trigger: GCCACATGGATCGAACACTCATGATGTGCCAAGTGC...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCAGCCCACTGGTGTCCATaGTTTGCAGTCGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPAHWCP*FAVAGT
Trigger: TGTTCCAGCGACTGCAAAGCATGGACACCAGTGGGC...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATATGGATGGCCTTAAGATaGTCTTCTGGAAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCIWMALR*SSGSPL
Trigger: CAGTGGGCTTCCAGAAGAGCATCTTAAGGCCATCCA...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCCTGGGCGAGCTGAGTaGTTAAATAATCTTGGATGG +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSPGRAE*LNNLGW
Trigger: CCATCCAAGATTATTTAAGCACTCAGCTCGCCCAGG...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACAATGTCGGGCTCCGGCTaGTCTGAGTGCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GHPDMTNVRKALSTALGTMSGSG*SECLFF
Trigger: GAAGAACAAGCACTCAGAGCAGCCGGAGCCCGACAT...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGGGGGGTCCTCTTGGGTaGCGATCACGTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRGGPLG*RSRKCH
Trigger: ATGACATTTACGTGATCGGCACCCAAGAGGACCCCC...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTACACTGGTGATTTCTTaGAGGGAGTGTTTGAGGATC +
Preference number: 4 (lower is better)
Translates to: PRLFVARLVCVFLPASALTLVIS*RECLRI
Trigger: GATCCTCAAACACTCCCTGCAAGAAATCACCAGTGT...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGACACTGGTGATTTCTTaGAGGGAGTGTTTGAGGATC +
Preference number: 4 (lower is better)
Translates to: LAQAEARSLHWRIGADFLTLVIS*RECLRI
Trigger: GATCCTCAAACACTCCCTGCAAGAAATCACCAGTGT...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTTCTGCGTACTGCTGCTaGTTGATTTTCTGGATGATG +
Preference number: 4 (lower is better)
Translates to: VARLVCVFLPASALGAKSSAYCC*LIFWMM
Trigger: CATCATCCAGAAAATCAAGCAGCAGCAGTACGCAGA...AGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGAAGGTCTGCGTACTGCTaGTGCTTGATTTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGRSAYC*CLIFWM
Trigger: CATCCAGAAAATCAAGCAGCAGCAGTACGCAGACCT...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCTGTAGGAAGACCTTCTaGTCCCTCCTCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: FIGYADFHHGNVGCIPFCCRKTF*SLLSVS
Trigger: GCTCACAGAGAGGAGGGAGCAGAAGGTCTTCCTACA...GCAGAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAATGCTGATGAGGATGTaGTGGTCTAGCAGGTACTCA +
Preference number: 4 (lower is better)
Translates to: VGHTEARPFPENTKPCIGMLMRM*WSSRYS
Trigger: TGAGTACCTGCTAGACCAGCACATCCTCATCAGCAT...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCCTAACCGAAGGGCAATaGAGCCCTCGCCATAGGATT +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPLTEGQ*SPRHRI
Trigger: AATCCTATGGCGAGGGCTGCATTGCCCTTCGGTTAG...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCCCTCCGGCCGGTGCTTaGCGTGATGCGGGAGCTCGG +
Preference number: 4 (lower is better)
Translates to: MLKKQHKERHHPSILLITPPAGA*RDAGAR
Trigger: CCGAGCTCCCGCATCACGGCAAGCACCGGCCGGAGG...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTGAAAACACAAAGCCTTaGATAGGAAGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPENTKP*IGSWAG
Trigger: TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTC...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTGAAAACACAAAGCCTTaGATAGGAAGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSENTKP*IGSWAG
Trigger: TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTC...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCGTTGCCCGTCTGGTGTaGGTTTTTCTTCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPVARLV*VFLPAS
Trigger: TGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGACCCAGACTGTTTGTTaGCCGTCTGGTGTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: HTEARPFPENTKPCIGSWTQTVC*PSGVRF
Trigger: AAAACGCACACCAGACGGGCAACAAACAGTCTGGGT...CCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCTCGAGGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTAGCCAGGTAGATCCCTaGTCTCAGCCTAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: SRGHPDMTNVRKALSTALSQVDP*SQPSHA
Trigger: GGCATGGCTAGGCTGAGAGCAGGGATCTACCTGGCT...AAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACCTCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCGGGTGCATTCCCTTCTaGATTCACACACACCACTGG +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSGCIPF*IHTHHW
Trigger: CCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCC...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCGGGTGCATTCCCTTCTaGATTCACACACACCACTGG +
Preference number: 4 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPGCIPF*IHTHHW
Trigger: CCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCC...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCCATGGGAATGTGGGGTaGATTCCCTTCTGCATTCAC +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGHGNVG*IPFCIH
Trigger: GTGAATGCAGAAGGGAATGCACCCCACATTCCCATG...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCTTCTTCCTCTGGGACTGACACTAGACTAAGTTTATCCACAGCCCCGCCTTTCCATCACTCGCATGTGTaGACATGCATGCGTTCACAC +
Preference number: 4 (lower is better)
Translates to: SSSSGTDTRLSLSTAPPFHHSHV*TCMRSH
Trigger: GTGTGAACGCATGCATGTGCACACATGCGAGTGATG...GAAAGGCGGGGCTGTGGATAAACTTAGTCTAGTGTCAGTCCCAGAGGAAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR GCA 90 bp GGGAGGCCCAGGCAGGCAGATCACCTGGCGAAACTCAGTTGCAAAACAAATTTACTTCCTTTTAACAACTaGTGCAGAGGCAATGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRPRQADHLAKLSCKTNLLPFNN*CRGNAG
Trigger: CCCTGCATTGCCTCTGCAGCAGTTGTTAAAAGGAAG...TAAATTTGTTTTGCAACTGAGTTTCGCCAGGTGATCTGCCTGCCTGGGCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR CCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTCGTCCTTGCCTGTCCTaGAAAGCAGCTCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSRPCLS*KAAPPP
Trigger: AGGCGGAGGAGCTGCTTTCCAGGACAGGCAAGGACG...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGGTGAGGAAGACTGCTaGACCCTGTCTTCACAAATT +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGGEEDC*TLSSQI
Trigger: AATTTGTGAAGACAGGGTCCAGCAGTCTTCCTCACC...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAAAGGAACCTGAGGACGTaGACGGAGGCCCGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQRNLRT*TEARGE
Trigger: CTCTCCCCGGGCCTCCGTCCACGTCCTCAGGTTCCT...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAATGTTCCAGAGCGTGTaGATGGCGACTGTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: VSQAVNSVGHTEARPFPEMFQSV*MATVLK
Trigger: TTTTAAAACAGTCGCCATCCACACGCTCTGGAACAT...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTTCTCGTGCTCAGGCTTaGCCAGCACCACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSSRAQA*PAPRCG
Trigger: TCCGCATCGTGGTGCTGGCCAAGCCTGAGCACGAGA...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATATTGTCAGTACAGATGTaGCTGATCCGGTTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCILSVQM*LIRFSC
Trigger: GCACGAGAACCGGATCAGCCACATCTGTACTGACAA...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCCTGTCGCTTTCTGCTTaGTGTAGGCGTATTTGTCCC +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGLSLSA*CRRICP
Trigger: GGGACAAATACGCCTACACCAAGCAGAAAGCGACAG...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGCTCCTGCCTCAAATGTaGCAAAGACAGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: WRIGADFLLLPTKELRSQLLPQM*QRQGCG
Trigger: ACCACAGCCCTGTCTTTGCCACATTTGAGGCAGGAG...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCAACTCAATCTGTCCTTaGCTGTCAACAGTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGNSICP*LSTVPG
Trigger: TCCCGGGACTGTTGACAGCCAAGGACAGATTGAGTT...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAACTCCAGGTAGAATTTaGTCTGGGACTTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTTPGRI*SGTWSS
Trigger: TGAAGACCAAGTCCCAGACCAAATTCTACCTGGAGT...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCAGCAGCTGCGTTTCTGTaGCCTCTAACCGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPAAAFL*PLTEGQ
Trigger: TTGCCCTTCGGTTAGAGGCCACAGAAACGCAGCTGC...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAAGGTGATATGGGCGGCTaGCCGGGAGGTGTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQGDMGG*PGGVGG
Trigger: TCCTCCGACACCTCCCGGCCAGCCGCCCATATCACC...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTACTTCTTGGGTGATATaGGCGGCTGGCCGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSTSWVI*AAGREV
Trigger: CACCTCCCGGCCAGCCGCCCATATCACCCAAGAAGT...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTCACGCCGTTCCTCTaGGCTCCCGACTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMFTPFL*APDSVA
Trigger: TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAA...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGATGTTTGTTGCCCGTCTaGTGTGCGTTTTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VGHTEARPFPENTKPCIGCLLPV*CAFFFQ
Trigger: CTGGAAGAAAAACGCACACCAGACGGGCAACAAACA...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTTGTTTGTTGCCCGTCTaGTGTGCGTTTTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSCLLPV*CAFFFQ
Trigger: CTGGAAGAAAAACGCACACCAGACGGGCAACAAACA...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTTGTTTGTTGCCCGTCTaGTGTGCGTTTTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RLFVARLVCVFLPASALGCLLPV*CAFFFQ
Trigger: CTGGAAGAAAAACGCACACCAGACGGGCAACAAACA...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATATTCCTTTCTTCAGAATaGCGCCCTCAACGAGGCACT +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCIFLSSE*RPQRGT
Trigger: AGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAA...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGATTAAACTGGTGGGTTTaGGCACGTGGTTTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: VGHTEARPFPENTKPCIGLNWWV*ARGFRW
Trigger: CCACCTAAAACCACGTGCCCAAACCCACCAGTTTAA...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGGAGGGCACTGGGCTTCTTAATGCTTTCACCCCTCCGAACACACACCGTTTTACCGTTTTAAACTGGTaGGTTTGGGCACGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: QEGTGLLNAFTPPNTHRFTVLNW*VWARGF
Trigger: AAAACCACGTGCCCAAACCCACCAGTTTAAAACGGT...AAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAGAAGCCCAGTGCCCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCACCCTGGCAGCCAGGCTaGAGAGCACGGCTTTCGGGA +
Preference number: 4 (lower is better)
Translates to: KQHKERHHPSILLITKEAPWQPG*RARLSG
Trigger: TCCCGAAAGCCGTGCTCTCCAGCCTGGCTGCCAGGG...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCCGCAGACTTCCATCATaGGAATGTGGGGTGCATTCC +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPRRLPS*ECGVHS
Trigger: GGAATGCACCCCACATTCCCATGATGGAAGTCTGCG...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
3UTR CAA 72 bp CAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTaGTACCCTAAACAAGCTACCCAGACTCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: QLVSLKLDRTGF*YPKQATQTLQL
Trigger: GAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGACCAGCTTAACTGACTaGCTTCCTGTTTCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRTSLTD*LPVSGA
Trigger: AGCGCCTGAAACAGGAAGTCAGTCAGTTAAGCTGGT...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR TCA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGACTCAACGTCGACTTTaGGCTGCATTTTCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPTQRRL*AAFSEE
Trigger: TTCCTCAGAAAATGCAGCTCAAAGTCGACGTTGAGT...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCAAGTCAAGTGGCTGTTaGCGAACCCTAAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPKSSGC*RTLRRF
Trigger: GAACCTCCTTAGGGTTCGTCAACAGCCACTTGACTT...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACATTTCTTTTCACTTCCTaGAGTCAAGTGGCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTFLFTS*SQVAVD
Trigger: GTCAACAGCCACTTGACTTCAGGAAGTGAAAAGAAA...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTAGTTTTGGTTTCGCCTaGGTTTCTTTTCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: PRLFVARLVCVFLPASALSFGFA*VSFHFL
Trigger: CAGGAAGTGAAAAGAAACTCAGGCGAAACCAAAACT...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCAAGGTGCGTGAAGCGGTaGGTGATGTTAAAGGGACTC +
Preference number: 4 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPRCVKR*VMLKGL
Trigger: GAGTCCCTTTAACATCACTCACCGCTTCACGCACCT...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGAGGTTGGGGCAAACGTaGTTTCTTCCTCCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRRLGQT*FLPPRS
Trigger: ACTTCGAGGAGGAAGAAATCACGTTTGCCCCAACCT...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGAGGTTGGGGCAAACGTaGTTTCTTCCTCCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: WRIGADFLLLPTKELRSQRLGQT*FLPPRS
Trigger: ACTTCGAGGAGGAAGAAATCACGTTTGCCCCAACCT...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCATGTGGCATAGCACCTaGGAAACTCAATCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GMWGAFPSAFTHTTGFSSMWHST*ETQSVL
Trigger: AAGGACAGATTGAGTTTCTCAGGTGCTATGCCACAT...GGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCATGTGGCATAGCACCTaGGAAACTCAATCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GHTEARPFPENTKPCIGSMWHST*ETQSVL
Trigger: AAGGACAGATTGAGTTTCTCAGGTGCTATGCCACAT...GCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTCCCTCGTCTTGCCCTaGGAGGTCTGCAGCTTGATC +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMSLVLP*EVCSLI
Trigger: GATCAAGCTGCAGACCTCTCAGGGCAAGACGAGGGA...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTTCCCTCGTCTTGCCCTaGGAGGTCTGCAGCTTGATC +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSSLVLP*EVCSLI
Trigger: GATCAAGCTGCAGACCTCTCAGGGCAAGACGAGGGA...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAACCGATCTGGAAGGCTTaGTGGGCCTCTTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQPIWKA*WASWPA
Trigger: TGCCGGCCAAGAGGCCCATCAAGCCTTCCAGATCGG...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CACTGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCTGGAGAATAGGAGCTaGTTTCCTGCTCCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: HWRIGADFLLLPTKELRSLENRS*FPAPSN
Trigger: GTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAG...GCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGTGGATGGCCTTAAGATaGTCTTCTGGAAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: WRIGADFLLLPTKELRSQWMALR*SSGSPL
Trigger: CAGTGGGCTTCCAGAAGAGCATCTTAAGGCCATCCA...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCCTCCATAGAGCTCCTTaGAGAGCAGTGTGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: FIGYADFHHGNVGCIPFCLHRAP*RAVWSV
Trigger: AACTGACCACACTGCTCTGCAAGGAGCTCTATGGAG...GCAGAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCAATCCCCAGAGACTCTaGCTTCACCTCAAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPNPQRL*LHLKGD
Trigger: GTCACCTTTGAGGTGAAGGCAGAGTCTCTGGGGATT...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTGTTCTTCATCTGCTaGAGGAGCTGGCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPLFFIC*RSWQKP
Trigger: AGGCTTCTGCCAGCTCCTGCAGCAGATGAAGAACAA...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCGGGGGTCCTCTTGGGTaGCGATCACGTAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFGGPLG*RSRKCH
Trigger: ATGACATTTACGTGATCGGCACCCAAGAGGACCCCC...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGAACACTGGTGATTTCTTaGAGGGAGTGTTTGAGGATC +
Preference number: 4 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGTLVIS*RECLRI
Trigger: GATCCTCAAACACTCCCTGCAAGAAATCACCAGTGT...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGCCAGTGTGTTTGCAATaGCTGTCTTCACGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: HTEARPFPENTKPCIGSWPVCLQ*LSSRCQ
Trigger: CTGACAACGTGAAGACAGGCATTGCAAACACACTGG...CCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGTTCCCCAGTGTGTTTaGAATGCCTGTCTTCACGTT +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCIVPQCV*NACLHV
Trigger: AACGTGAAGACAGGCATTGCAAACACACTGGGGAAC...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTTCTGCGTACTGCTGCTaGTTGATTTTCTGGATGATG +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSSAYCC*LIFWMM
Trigger: CATCATCCAGAAAATCAAGCAGCAGCAGTACGCAGA...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGAGGAGGTCTGCGTACTaGTGCTGCTTGATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRRRSAY*CCLIFW
Trigger: CCAGAAAATCAAGCAGCAGCAGTACGCAGACCTCCT...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCCTGGGAAGTGACTCCTaGCTCAAATGTGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPLGSDS*LKCGKD
Trigger: GTCTTTGCCACATTTGAGGCAGGAGTCACTTCCCAG...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTGGGAAGTGACTCCTaGCTCAAATGTGGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSLGSDS*LKCGKD
Trigger: GTCTTTGCCACATTTGAGGCAGGAGTCACTTCCCAG...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCATGCTGATGAGGATGTaGTGGTCTAGCAGGTACTCA +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGMLMRM*WSSRYS
Trigger: TGAGTACCTGCTAGACCAGCACATCCTCATCAGCAT...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAATTGGAGTGCTGGAGGTaGAGCACCGCCGGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQLECWR*STAGLL
Trigger: CAAGAGCCCGGCGGTGCTGCACCTCCAGCACTCCAA...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGAAAACACAAAGCCTTaGATAGGAAGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCIENTKP*IGSWAG
Trigger: TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTC...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCGAAAACACAAAGCCTTaGATAGGAAGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGENTKP*IGSWAG
Trigger: TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTC...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCACCCAGACTGTTTGTTaGCCGTCTGGTGTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPTQTVC*PSGVRF
Trigger: AAAACGCACACCAGACGGGCAACAAACAGTCTGGGT...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCACCCAGACTGTTTGTTaGCCGTCTGGTGTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSTQTVC*PSGVRF
Trigger: AAAACGCACACCAGACGGGCAACAAACAGTCTGGGT...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTATAGGAAGAAAAGGCTaGACTATTTCAAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PRLFVARLVCVFLPASALIGRKG*TISRAW
Trigger: CCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTAT...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGATAGGAAGAAAAGGCTaGACTATTTCAAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVIGRKG*TISRAW
Trigger: CCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTAT...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCGGGTGCATTCCCTTCTaGATTCACACACACCACTGG +
Preference number: 4 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFGCIPF*IHTHHW
Trigger: CCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCC...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTTGGGGGCAGCTCGGGTaGAGACACGACACTTTCTGT +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSWGQLG*RHDTFC
Trigger: ACAGAAAGTGTCGTGTCTCCACCCGAGCTGCCCCCA...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCATGCTTTGCAGTCGCTaGAACAATGTCTCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSMLCSR*NNVSER
Trigger: CCTCTCCGAGACATTGTTCCAGCGACTGCAAAGCAT...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGAGCCTTCTCTCTTTTTaGAGTCAGCAAAAACATATT +
Preference number: 4 (lower is better)
Translates to: KYQERAGDPDCLLPVWCASLLSF*SQQKHI
Trigger: AATATGTTTTTGCTGACTCCAAAAAGAGAGAAGGCT...CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGATGTTCCAGAGCGTGTaGATGGCGACTGTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWMFQSV*MATVLK
Trigger: TTTTAAAACAGTCGCCATCCACACGCTCTGGAACAT...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAAATGTTCCAGAGCGTGTaGATGGCGACTGTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: ISTLKSALQFLSSEWRPQMFQSV*MATVLK
Trigger: TTTTAAAACAGTCGCCATCCACACGCTCTGGAACAT...TTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCTTGTCAGTACAGATGTaGCTGATCCGGTTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: FIGYADFHHGNVGCIPFCLSVQM*LIRFSC
Trigger: GCACGAGAACCGGATCAGCCACATCTGTACTGACAA...GCAGAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CACTGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCTTGTCAGTACAGATGTaGCTGATCCGGTTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: HWRIGADFLLLPTKELRSLSVQM*LIRFSC
Trigger: GCACGAGAACCGGATCAGCCACATCTGTACTGACAA...GCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGATGCTGCTTGATTTTCTaGATGATGGTTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VGHTEARPFPENTKPCIGCCLIF*MMVSAS
Trigger: GGAGGCAGAAACCATCATCCAGAAAATCAAGCAGCA...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGACTCAAAACGGTAGGTTaGGGCAAACGTGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: VGHTEARPFPENTKPCIGLKTVG*GKRDFF
Trigger: GAAGAAATCACGTTTGCCCCAACCTACCGTTTTGAG...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTATTTGGTCTGGGACTTaGTCTTCAATGTGGCATAGC +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPIWSGT*SSMWHS
Trigger: GCTATGCCACATTGAAGACCAAGTCCCAGACCAAAT...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCATTTGGTCTGGGACTTaGTCTTCAATGTGGCATAGC +
Preference number: 4 (lower is better)
Translates to: GMWGAFPSAFTHTTGFSSIWSGT*SSMWHS
Trigger: GCTATGCCACATTGAAGACCAAGTCCCAGACCAAAT...GGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGATTTGGTCTGGGACTTaGTCTTCAATGTGGCATAGC +
Preference number: 4 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPIWSGT*SSMWHS
Trigger: GCTATGCCACATTGAAGACCAAGTCCCAGACCAAAT...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGAATGGGCTTCAGCTTTaGAAGAGTCTCACCAAACTT +
Preference number: 4 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWNGLQL*KSLTKL
Trigger: AAGTTTGGTGAGACTCTTCCAAAGCTGAAGCCCATT...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCACTGATGAGGATGTGCTaGTCTAGCAGGTACTCAGGG +
Preference number: 4 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPLMRMC*SSRYSG
Trigger: CCCTGAGTACCTGCTAGACCAGCACATCCTCATCAG...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGAGGGTAAAAACTTCTTaGGTGATATGGGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WRIGADFLLLPTKELRSQRVKTS*VIWAAG
Trigger: GCCAGCCGCCCATATCACCCAAGAAGTTTTTACCCT...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGCCCTCAACGAGGCACTaGGGTCCCAAGTACCAAGAG +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMPSTRH*GPKYQE
Trigger: CTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGG...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCTCGAGGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGCACGTGGTTTTAGGTaGCTAGAGCCTCAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SRGHPDMTNVRKALSTALARGFR*LEPQLS
Trigger: CGAGAGCTGAGGCTCTAGCCACCTAAAACCACGTGC...AAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACCTCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCACCGTTTTAAACTGGTaGGTTTGGGCACGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: GMWGAFPSAFTHTTGFSSTVLNW*VWARGF
Trigger: AAAACCACGTGCCCAAACCCACCAGTTTAAAACGGT...GGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCGCCAGATCTCTCCACTaGAGAATAGGAGCTGATTTC +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGARSLH*RIGADF
Trigger: GAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGC...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGACGGATGCCTGAACAGTaGATTTATCATCTTCATTGG +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGRMPEQ*IYHLHW
Trigger: CCAATGAAGATGATAAATTCACTGTTCAGGCATCCG...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACATCGGGGATTCTCGTTTaGAAAAGGAACCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GHPDMTNVRKALSTALGTSGILV*KRNLLG
Trigger: GCCAAGGAGGTTCCTTTTTCAAACGAGAATCCCCGA...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGTTGAGCTGCATTTTCTaGGGAATCCCCAGAGACTCT +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRLSCIF*GIPRDS
Trigger: AGAGTCTCTGGGGATTCCTCAGAAAATGCAGCTCAA...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTTTCTTTTCACTTCCTaGAGTCAAGTGGCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPFLFTS*SQVAVD
Trigger: GTCAACAGCCACTTGACTTCAGGAAGTGAAAAGAAA...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTAGTTTTGGTTTCGCCTaGGTTTCTTTTCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPSFGFA*VSFHFL
Trigger: CAGGAAGTGAAAAGAAACTCAGGCGAAACCAAAACT...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCGCCCTCGGCAGAGGATaGGCACGTGAAGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: MLKKQHKERHHPSILLITALGRG*AREGAQ
Trigger: CTGCGCTCCTTCACGTGCTCATCCTCTGCCGAGGGC...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp TCTCGAGGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGCACTTGGCACATCATaGGTGTTCGATCCATGTGGC +
Preference number: 4 (lower is better)
Translates to: SRGHPDMTNVRKALSTALALGTS*VFDPCG
Trigger: GCCACATGGATCGAACACTCATGATGTGCCAAGTGC...AAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACCTCGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAACTTAACTGTGGCTGGTaGTGGCTGCCCACCTCGAGG +
Preference number: 4 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQLNCGW*WLPTSR
Trigger: CCTCGAGGTGGGCAGCCATCACCAGCCACAGTTAAG...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGTGACTTAATGAGCTaGAGGATTTTCTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VNSVGHTEARPFPENTKPCDLMS*RIFLWL
Trigger: CAGCCACAAGAAAATCCTGCAGCTCATTAAGTCACA...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAACACTGGTGATTTCTTaGAGGGAGTGTTTGAGGATC +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCITLVIS*RECLRI
Trigger: GATCCTCAAACACTCCCTGCAAGAAATCACCAGTGT...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCCCAGTGTGTTTGCAATaGCTGTCTTCACGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPPVCLQ*LSSRCQ
Trigger: CTGACAACGTGAAGACAGGCATTGCAAACACACTGG...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CACTGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCAGGTCTGCGTACTGCTaGTGCTTGATTTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: HWRIGADFLLLPTKELRSRSAYC*CLIFWM
Trigger: CATCCAGAAAATCAAGCAGCAGCAGTACGCAGACCT...GCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGGTGGGACAGGAGGTCTaGGTACTGCTGCTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMVGQEV*VLLLLD
Trigger: ATCAAGCAGCAGCAGTACGCAGACCTCCTGTCCCAC...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCATGCTGATGAGGATGTaGTGGTCTAGCAGGTACTCA +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSMLMRM*WSSRYS
Trigger: TGAGTACCTGCTAGACCAGCACATCCTCATCAGCAT...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGATGCTGATGAGGATGTaGTGGTCTAGCAGGTACTCA +
Preference number: 4 (lower is better)
Translates to: WRIGADFLLLPTKELRSQMLMRM*WSSRYS
Trigger: TGAGTACCTGCTAGACCAGCACATCCTCATCAGCAT...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCCTCAAATCGGCGCTaGAGTTCCTTTCTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRPSNRR*SSFLQN
Trigger: ATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCCCCTCAAATCGGCGCTaGAGTTCCTTTCTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPPSNRR*SSFLQN
Trigger: ATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGAATAGGAAGAAAAGGCTaGACTATTTCAAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGIGRKG*TISRAW
Trigger: CCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTAT...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCACATGGGAATGTGGGGTaGATTCCCTTCTGCATTCAC +
Preference number: 4 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPHGNVG*IPFCIH
Trigger: GTGAATGCAGAAGGGAATGCACCCCACATTCCCATG...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGACGTCAGGAGAGTTGTaGCCACTTCTGAAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRTSGEL*PLLKKH
Trigger: ATGCTTCTTCAGAAGTGGCCACAACTCTCCTGACGT...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCTTAAGATGCTCTTCTaGAAGCCCACTGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRLKMLF*KPTGVH
Trigger: ATGGACACCAGTGGGCTTCCAGAAGAGCATCTTAAG...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACAAACAGGCTTGTCAGTTaGCTGAGCTTGGACACCATG +
Preference number: 4 (lower is better)
Translates to: GHPDMTNVRKALSTALGTNRLVS*LSLDTM
Trigger: CATGGTGTCCAAGCTCAGCCAACTGACAAGCCTGTT...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGAATGTTCCAGAGCGTGTaGATGGCGACTGTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGMFQSV*MATVLK
Trigger: TTTTAAAACAGTCGCCATCCACACGCTCTGGAACAT...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGCTTCCTGAAGTCAAGTaGCTGTTGACGAACCCTAAG +
Preference number: 4 (lower is better)
Translates to: WRIGADFLLLPTKELRSQLPEVK*LLTNPK
Trigger: CTTAGGGTTCGTCAACAGCCACTTGACTTCAGGAAG...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCCTTCCTGAAGTCAAGTaGCTGTTGACGAACCCTAAG +
Preference number: 4 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPLPEVK*LLTNPK
Trigger: CTTAGGGTTCGTCAACAGCCACTTGACTTCAGGAAG...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAAGTGAGCAGCTGGTCGTaGGACAGGAGGTCTGCGTAC +
Preference number: 4 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQVSSWS*DRRSAY
Trigger: GTACGCAGACCTCCTGTCCCACGACCAGCTGCTCAC...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACACTGTCGCTTTCTGCTTaGTGTAGGCGTATTTGTCCC +
Preference number: 4 (lower is better)
Translates to: GHPDMTNVRKALSTALGTLSLSA*CRRICP
Trigger: GGGACAAATACGCCTACACCAAGCAGAAAGCGACAG...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCTCGAGGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGCAAAGACAGGGCTGTaGTCACTCGTCATGATGTCG +
Preference number: 4 (lower is better)
Translates to: SRGHPDMTNVRKALSTALAKTGL*SLVMMS
Trigger: CGACATCATGACGAGTGACCACAGCCCTGTCTTTGC...AAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACCTCGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCTTCTTGGAGACAAACTaGGAAGTGACTCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: FIGYADFHHGNVGCIPFCFLETN*EVTPAS
Trigger: TGAGGCAGGAGTCACTTCCCAGTTTGTCTCCAAGAA...GCAGAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTAATGGGCTTCAGCTTTaGAAGAGTCTCACCAAACTT +
Preference number: 4 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSNGLQL*KSLTKL
Trigger: AAGTTTGGTGAGACTCTTCCAAAGCTGAAGCCCATT...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGAAATGGGCTTCAGCTTTaGAAGAGTCTCACCAAACTT +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGNGLQL*KSLTKL
Trigger: AAGTTTGGTGAGACTCTTCCAAAGCTGAAGCCCATT...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGGGTCTTTGGCCCACTaGATTCATCACGCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSGSLAH*IHHAPS
Trigger: AGACGGAGCGTGATGAATCCAGTGGGCCAAAGACCC...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ATTATTATCTATATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAACCTTCCGCGGCATTTTaGGGGATTCCTGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: IIIYISTLKSALQFLSSEPSAAF*GIPGPS
Trigger: GGAAGGACCAGGAATCCCCCAAAATGCCGCGGAAGG...TTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATAGATAATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGTGGGCGGGGTCTGCTaGTTGATTTCCGATCTGGAA +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSVGGVC*LISDLE
Trigger: TTCCAGATCGGAAATCAACCAGCAGACCCCGCCCAC...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTGTTTGTTGCCCGTCTaGTGTGCGTTTTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPCLLPV*CAFFFQ
Trigger: CTGGAAGAAAAACGCACACCAGACGGGCAACAAACA...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCTGTTTGTTGCCCGTCTaGTGTGCGTTTTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPCLLPV*CAFFFQ
Trigger: CTGGAAGAAAAACGCACACCAGACGGGCAACAAACA...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCTGTTTGTTGCCCGTCTaGTGTGCGTTTTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSCLLPV*CAFFFQ
Trigger: CTGGAAGAAAAACGCACACCAGACGGGCAACAAACA...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTAAACTGGTGGGTTTaGGCACGTGGTTTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPLNWWV*ARGFRW
Trigger: CCACCTAAAACCACGTGCCCAAACCCACCAGTTTAA...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGGCCAGATCTCTCCACTaGAGAATAGGAGCTGATTTC +
Preference number: 4 (lower is better)
Translates to: WRIGADFLLLPTKELRSQARSLH*RIGADF
Trigger: GAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGC...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCCCCTGGCAGCCAGGCTaGAGAGCACGGCTTTCGGGA +
Preference number: 4 (lower is better)
Translates to: MLKKQHKERHHPSILLITPWQPG*RARLSG
Trigger: TCCCGAAAGCCGTGCTCTCCAGCCTGGCTGCCAGGG...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGCGGATGCCTGAACAGTaGATTTATCATCTTCATTGG +
Preference number: 4 (lower is better)
Translates to: HTEARPFPENTKPCIGSWRMPEQ*IYHLHW
Trigger: CCAATGAAGATGATAAATTCACTGTTCAGGCATCCG...CCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGGTCAGTTTCTTCAGGTaGGGAAGACTGCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMVSFFR*GRLLDP
Trigger: AGGGTCCAGCAGTCTTCCTCACCTGAAGAAACTGAC...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCAGGGCTCCGGCTGCTCTaGGTGCTTGTTCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: KQHKERHHPSILLITKEAGLRLL*VLVLHL
Trigger: CAGATGAAGAACAAGCACTCAGAGCAGCCGGAGCCC...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ATTATTATCTATATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAACAGTACAGATGTGGCTaGTCCGGTTCTCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: IIIYISTLKSALQFLSSEQYRCG*SGSRAQ
Trigger: CTGAGCACGAGAACCGGATCAGCCACATCTGTACTG...TTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATAGATAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCAGTTTTGGTTTCGCCTaGGTTTCTTTTCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGSFGFA*VSFHFL
Trigger: CAGGAAGTGAAAAGAAACTCAGGCGAAACCAAAACT...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCATGTGGCATAGCACCTaGGAAACTCAATCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSMWHST*ETQSVL
Trigger: AAGGACAGATTGAGTTTCTCAGGTGCTATGCCACAT...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCCCGATCTGGAAGGCTTaGTGGGCCTCTTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: MLKKQHKERHHPSILLITPIWKA*WASWPA
Trigger: TGCCGGCCAAGAGGCCCATCAAGCCTTCCAGATCGG...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ATTATTATCTATATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAAAAGTCTCACAGGCAGTaGACTCTGTGGGCCACACAG +
Preference number: 4 (lower is better)
Translates to: IIIYISTLKSALQFLSSEKSHRQ*TLWATQ
Trigger: CTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTT...TTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATAGATAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCACTTGGCACATCATaGGTGTTCGATCCATGTGGC +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSALGTS*VFDPCG
Trigger: GCCACATGGATCGAACACTCATGATGTGCCAAGTGC...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TCTCGAGGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTTGGTCAAATAACCTCTaGAGAGACTCCAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: SRGHPDMTNVRKALSTALWSNNL*RDSRDG
Trigger: CCCATCCCTGGAGTCTCTGCAGAGGTTATTTGACCA...AAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACCTCGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAATGGCCAGCACCACGATaGGGATGTTCCAGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQWPAPR*GCSRAC
Trigger: ACACGCTCTGGAACATCCGCATCGTGGTGCTGGCCA...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACAGTTCCCCAGTGTGTTTaGAATGCCTGTCTTCACGTT +
Preference number: 4 (lower is better)
Translates to: GHPDMTNVRKALSTALGTVPQCV*NACLHV
Trigger: AACGTGAAGACAGGCATTGCAAACACACTGGGGAAC...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTCTAACCGAAGGGCAATaGAGCCCTCGCCATAGGATT +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSLTEGQ*SPRHRI
Trigger: AATCCTATGGCGAGGGCTGCATTGCCCTTCGGTTAG...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCCTCCAGGCTGTGGGCTaGTGGTCAGGGGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: MLKKQHKERHHPSILLITLQAVG*WSGDKV
Trigger: GACCTTGTCCCCTGACCAGCAGCCCACAGCCTGGAG...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CGAACACACACCGTTTTAAACTGGTGGGTTTGGGCACGTGGTTTTAGGTGGCTAATAGGAAGAAAAGGCTaGACTATTTCAAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RTHTVLNWWVWARGFRWLIGRKG*TISRAW
Trigger: CCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTAT...TAGCCACCTAAAACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ATTATTATCTATATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAACCTAGCAGGCATGGGTaGGCCAGAGAAGTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: IIIYISTLKSALQFLSSEPSRHG*AREVVL
Trigger: AAGAACCACTTCTCTGGCCCACCCATGCCTGCTAGG...TTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATAGATAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CCA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCACGGGTGATGTTGCCATaGTTCCAGCAGGGGACCATG +
Preference number: 4 (lower is better)
Translates to: KQHKERHHPSILLITKEARVMLP*FQQGTM
Trigger: CATGGTCCCCTGCTGGAACCATGGCAACATCACCCG...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAATGGCCTCACAGGAGCTaGCAGTCAGCGGGATGTTTC +
Preference number: 4 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQWPHRS*QSAGCF
Trigger: GAAACATCCCGCTGACTGCCAGCTCCTGTGAGGCCA...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCAGGTGAGGAAGACTGCTaGACCCTGTCTTCACAAATT +
Preference number: 4 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPGEEDC*TLSSQI
Trigger: AATTTGTGAAGACAGGGTCCAGCAGTCTTCCTCACC...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCACAGAGACTCCAGGGATaGGAGGGTCCGGATGACTTC +
Preference number: 4 (lower is better)
Translates to: KQHKERHHPSILLITKEAQRLQG*EGPDDF
Trigger: GAAGTCATCCGGACCCTCCCATCCCTGGAGTCTCTG...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACATTCTTGGAGACAAACTaGGAAGTGACTCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: GHPDMTNVRKALSTALGTFLETN*EVTPAS
Trigger: TGAGGCAGGAGTCACTTCCCAGTTTGTCTCCAAGAA...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAAATGGGCTTCAGCTTTaGAAGAGTCTCACCAAACTT +
Preference number: 4 (lower is better)
Translates to: SVGHTEARPFPENTKPCINGLQL*KSLTKL
Trigger: AAGTTTGGTGAGACTCTTCCAAAGCTGAAGCCCATT...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGCTGATGAGGATGTGCTaGTCTAGCAGGTACTCAGGG +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMLMRMC*SSRYSG
Trigger: CCCTGAGTACCTGCTAGACCAGCACATCCTCATCAG...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTCTGATGAGGATGTGCTaGTCTAGCAGGTACTCAGGG +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSLMRMC*SSRYSG
Trigger: CCCTGAGTACCTGCTAGACCAGCACATCCTCATCAG...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTCTTCAGGGTCTTTaGCCCACTGGATTCATCACG +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSALQGL*PTGFIT
Trigger: CGTGATGAATCCAGTGGGCCAAAGACCCTGAAGAGC...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ATTATTATCTATATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAAGCACGTGGTTTTAGGTaGCTAGAGCCTCAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: IIIYISTLKSALQFLSSEARGFR*LEPQLS
Trigger: CGAGAGCTGAGGCTCTAGCCACCTAAAACCACGTGC...TTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATAGATAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAAGCTTGGACACCATGTTaGTGGGATTGGCCTCACCAG +
Preference number: 4 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQAWTPC*WDWPHQ
Trigger: CTGGTGAGGCCAATCCCATCAACATGGTGTCCAAGC...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCTTTCTTTTCACTTCCTaGAGTCAAGTGGCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSFLFTS*SQVAVD
Trigger: GTCAACAGCCACTTGACTTCAGGAAGTGAAAAGAAA...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTTCTTTTCACTTCCTaGAGTCAAGTGGCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPFLFTS*SQVAVD
Trigger: GTCAACAGCCACTTGACTTCAGGAAGTGAAAAGAAA...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CACTGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCAGTTTTGGTTTCGCCTaGGTTTCTTTTCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: HWRIGADFLLLPTKELRSSFGFA*VSFHFL
Trigger: CAGGAAGTGAAAAGAAACTCAGGCGAAACCAAAACT...GCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTCAGGTGAGGAAGACTaGTGGACCCTGTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMSGEED*WTLSSQ
Trigger: TTGTGAAGACAGGGTCCAGCAGTCTTCCTCACCTGA...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTGGTCAAATAACCTCTaGAGAGACTCCAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMWSNNL*RDSRDG
Trigger: CCCATCCCTGGAGTCTCTGCAGAGGTTATTTGACCA...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGTTCTTCATCTGCTaGAGGAGCTGGCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMLFFIC*RSWQKP
Trigger: AGGCTTCTGCCAGCTCCTGCAGCAGATGAAGAACAA...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCACACTGGTGATTTCTTaGAGGGAGTGTTTGAGGATC +
Preference number: 4 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFTLVIS*RECLRI
Trigger: GATCCTCAAACACTCCCTGCAAGAAATCACCAGTGT...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAATCAGGGGACAAGGTCTaGTTCACGTGCAGGGGCATT +
Preference number: 4 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQSGDKV*FTCRGI
Trigger: AATGCCCCTGCACGTGAAGCAGACCTTGTCCCCTGA...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCATAGGAAGAAAAGGCTaGACTATTTCAAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPIGRKG*TISRAW
Trigger: CCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTAT...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCATGTTCCAGAGCGTGTaGATGGCGACTGTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSMFQSV*MATVLK
Trigger: TTTTAAAACAGTCGCCATCCACACGCTCTGGAACAT...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCAATTTGGTCTGGGACTTaGTCTTCAATGTGGCATAGC +
Preference number: 4 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPIWSGT*SSMWHS
Trigger: GCTATGCCACATTGAAGACCAAGTCCCAGACCAAAT...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCAGGGTCTTTGGCCCACTaGATTCATCACGCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: KQHKERHHPSILLITKEAGSLAH*IHHAPS
Trigger: AGACGGAGCGTGATGAATCCAGTGGGCCAAAGACCC...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ATTATTATCTATATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAAGTACCAAGAGCGAGCTaGGGACCCAGACTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: IIIYISTLKSALQFLSSEVPRAS*GPRLFV
Trigger: AACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTAC...TTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATAGATAATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTCCTTTCTTCAGAATaGCGCCCTCAACGAGGCACT +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMFLSSE*RPQRGT
Trigger: AGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAA...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCACCGTTTTAAACTGGTaGGTTTGGGCACGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFTVLNW*VWARGF
Trigger: AAAACCACGTGCCCAAACCCACCAGTTTAAAACGGT...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCTCGAGGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTCGATGGAATACATGTTaGGGGGCTTGGCTTAACTGT +
Preference number: 4 (lower is better)
Translates to: SRGHPDMTNVRKALSTALRWNTC*GAWLNC
Trigger: ACAGTTAAGCCAAGCCCCCCAACATGTATTCCATCG...AAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACCTCGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCAAAGGCACAATTTATTaGTTACGCAGACTTCCATCA +
Preference number: 4 (lower is better)
Translates to: GMWGAFPSAFTHTTGFSSKGTIY*LRRLPS
Trigger: TGATGGAAGTCTGCGTAACCAATAAATTGTGCCTTT...GGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGAAAAGGCACAATTTATTaGTTACGCAGACTTCCATCA +
Preference number: 4 (lower is better)
Translates to: EARPFPENTKPCIGSWAGKGTIY*LRRLPS
Trigger: TGATGGAAGTCTGCGTAACCAATAAATTGTGCCTTT...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCAGTTTTGGTTTCGCCTaGGTTTCTTTTCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFSFGFA*VSFHFL
Trigger: CAGGAAGTGAAAAGAAACTCAGGCGAAACCAAAACT...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAAAGGTGCGTGAAGCGGTaGGTGATGTTAAAGGGACTC +
Preference number: 4 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQRCVKR*VMLKGL
Trigger: GAGTCCCTTTAACATCACTCACCGCTTCACGCACCT...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ATTATTATCTATATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAAAGGTTGGGGCAAACGTaGTTTCTTCCTCCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: IIIYISTLKSALQFLSSERLGQT*FLPPRS
Trigger: ACTTCGAGGAGGAAGAAATCACGTTTGCCCCAACCT...TTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATAGATAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAGGCCCGGGGAGAGCTaGTGGTCAAATAACCTCTGC +
Preference number: 4 (lower is better)
Translates to: MLKKQHKERHHPSILLITRPGES*WSNNLC
Trigger: GCAGAGGTTATTTGACCAGCAGCTCTCCCCGGGCCT...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCATGTGACTTAATGAGCTaGAGGATTTTCTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPCDLMS*RIFLWL
Trigger: CAGCCACAAGAAAATCCTGCAGCTCATTAAGTCACA...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCTCCCGCGTCTTTCCCTaGCCCTTGGAGAGAAACCAG +
Preference number: 4 (lower is better)
Translates to: MLKKQHKERHHPSILLITSRVFP*PLERNQ
Trigger: CTGGTTTCTCTCCAAGGGGCAGGGAAAGACGCGGGA...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGCCCTCAAATCGGCGCTaGAGTTCCTTTCTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMPSNRR*SSFLQN
Trigger: ATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCAACTTCTGAAGAAGCATaGCCTAGCAGGCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: KQHKERHHPSILLITKEATSEEA*PSRHGW
Trigger: CCACCCATGCCTGCTAGGCCATGCTTCTTCAGAAGT...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTACGTCAGGAGAGTTGTaGCCACTTCTGAAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSTSGEL*PLLKKH
Trigger: ATGCTTCTTCAGAAGTGGCCACAACTCTCCTGACGT...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTCTTAAGATGCTCTTCTaGAAGCCCACTGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSLKMLF*KPTGVH
Trigger: ATGGACACCAGTGGGCTTCCAGAAGAGCATCTTAAG...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTCTTCCTGAAGTCAAGTaGCTGTTGACGAACCCTAAG +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSLPEVK*LLTNPK
Trigger: CTTAGGGTTCGTCAACAGCCACTTGACTTCAGGAAG...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp TCTCGAGGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTTGCTGCTTGATTTTCTaGATGATGGTTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SRGHPDMTNVRKALSTALCCLIF*MMVSAS
Trigger: GGAGGCAGAAACCATCATCCAGAAAATCAAGCAGCA...AAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACCTCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCTCTTCCCCAGGTCACTaGGCCTTGACTCCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: MLKKQHKERHHPSILLITSSPGH*ALTPVS
Trigger: GGACACAGGAGTCAAGGCCCAGTGACCTGGGGAAGA...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGCGATGGAATACATGTTaGGGGGCTTGGCTTAACTGT +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMRWNTC*GAWLNC
Trigger: ACAGTTAAGCCAAGCCCCCCAACATGTATTCCATCG...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCATGGATGGCCTTAAGATaGTCTTCTGGAAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: KQHKERHHPSILLITKEAWMALR*SSGSPL
Trigger: CAGTGGGCTTCCAGAAGAGCATCTTAAGGCCATCCA...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCATGTCGGGCTCCGGCTaGTCTGAGTGCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: MLKKQHKERHHPSILLITMSGSG*SECLFF
Trigger: GAAGAACAAGCACTCAGAGCAGCCGGAGCCCGACAT...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTTCTGCGTACTGCTGCTaGTTGATTTTCTGGATGATG +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSSAYCC*LIFWMM
Trigger: CATCATCCAGAAAATCAAGCAGCAGCAGTACGCAGA...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAAACAGGGTATTGCAGATaGGTCACCAGCCCCATGTTT +
Preference number: 4 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQTGYCR*VTSPMF
Trigger: AAACATGGGGCTGGTGACCCATCTGCAATACCCTGT...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGAGCCTTCTCTCTTTTTaGAGTCAGCAAAAACATATT +
Preference number: 4 (lower is better)
Translates to: HTEARPFPENTKPCIGSWSLLSF*SQQKHI
Trigger: AATATGTTTTTGCTGACTCCAAAAAGAGAGAAGGCT...CCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTCTCAAAACGGTAGGTTaGGGCAAACGTGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSLKTVG*GKRDFF
Trigger: GAAGAAATCACGTTTGCCCCAACCTACCGTTTTGAG...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGACTCCAGGTAGAATTTaGTCTGGGACTTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMTPGRI*SGTWSS
Trigger: TGAAGACCAAGTCCCAGACCAAATTCTACCTGGAGT...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCAAGGGTAAAAACTTCTTaGGTGATATGGGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: KQHKERHHPSILLITKEARVKTS*VIWAAG
Trigger: GCCAGCCGCCCATATCACCCAAGAAGTTTTTACCCT...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAACACACCGTTTTAAACTaGTGGGTTTGGGCACGTGGT +
Preference number: 4 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQHTVLN*WVWARG
Trigger: ACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTG...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGAAAGGCACAATTTATTaGTTACGCAGACTTCCATCA +
Preference number: 4 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRKGTIY*LRRLPS
Trigger: TGATGGAAGTCTGCGTAACCAATAAATTGTGCCTTT...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ATTATTATCTATATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAAACTCAACGTCGACTTTaGGCTGCATTTTCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: IIIYISTLKSALQFLSSETQRRL*AAFSEE
Trigger: TTCCTCAGAAAATGCAGCTCAAAGTCGACGTTGAGT...TTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATAGATAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ATTATTATCTATATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATCTGCGTACTGCTGCTaGTTGATTTTCTGGATGATG +
Preference number: 4 (lower is better)
Translates to: IIIYISTLKSALQFLSSESAYCC*LIFWMM
Trigger: CATCATCCAGAAAATCAAGCAGCAGCAGTACGCAGA...TTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATAGATAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCACCCTCAAATCGGCGCTaGAGTTCCTTTCTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: KQHKERHHPSILLITKEAPSNRR*SSFLQN
Trigger: ATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCGGGTGCATTCCCTTCTaGATTCACACACACCACTGG +
Preference number: 4 (lower is better)
Translates to: MLKKQHKERHHPSILLITGCIPF*IHTHHW
Trigger: CCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCC...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCCTGATGAGGATGTGCTaGTCTAGCAGGTACTCAGGG +
Preference number: 4 (lower is better)
Translates to: MLKKQHKERHHPSILLITLMRMC*SSRYSG
Trigger: CCCTGAGTACCTGCTAGACCAGCACATCCTCATCAG...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCATTAAACTGGTGGGTTTaGGCACGTGGTTTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: KQHKERHHPSILLITKEALNWWV*ARGFRW
Trigger: CCACCTAAAACCACGTGCCCAAACCCACCAGTTTAA...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAAGCCAGATCTCTCCACTaGAGAATAGGAGCTGATTTC +
Preference number: 4 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQARSLH*RIGADF
Trigger: GAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGC...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAATCCCCAGAGACTCTaGCTTCACCTCAAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: MLKKQHKERHHPSILLITNPQRL*LHLKGD
Trigger: GTCACCTTTGAGGTGAAGGCAGAGTCTCTGGGGATT...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ATTATTATCTATATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAAAATGGGCTTCAGCTTTaGAAGAGTCTCACCAAACTT +
Preference number: 4 (lower is better)
Translates to: IIIYISTLKSALQFLSSENGLQL*KSLTKL
Trigger: AAGTTTGGTGAGACTCTTCCAAAGCTGAAGCCCATT...TTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATAGATAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCAACCGTTTTAAACTGGTaGGTTTGGGCACGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: KQHKERHHPSILLITKEATVLNW*VWARGF
Trigger: AAAACCACGTGCCCAAACCCACCAGTTTAAAACGGT...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCATTTCTTTTCACTTCCTaGAGTCAAGTGGCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: KQHKERHHPSILLITKEAFLFTS*SQVAVD
Trigger: GTCAACAGCCACTTGACTTCAGGAAGTGAAAAGAAA...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR GCA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCGAAAACACAAAGCCTTaGATAGGAAGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: MLKKQHKERHHPSILLITENTKP*IGSWAG
Trigger: TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTC...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCCTTCCTGAAGTCAAGTaGCTGTTGACGAACCCTAAG +
Preference number: 4 (lower is better)
Translates to: MLKKQHKERHHPSILLITLPEVK*LLTNPK
Trigger: CTTAGGGTTCGTCAACAGCCACTTGACTTCAGGAAG...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGAAAGGCACAATTTATTaGTTACGCAGACTTCCATCA +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMKGTIY*LRRLPS
Trigger: TGATGGAAGTCTGCGTAACCAATAAATTGTGCCTTT...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGAGCCTTCTCTCTTTTTaGAGTCAGCAAAAACATATT +
Preference number: 4 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMSLLSF*SQQKHI
Trigger: AATATGTTTTTGCTGACTCCAAAAAGAGAGAAGGCT...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCTGCTGCTTGATTTTCTaGATGATGGTTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: MLKKQHKERHHPSILLITCCLIF*MMVSAS
Trigger: GGAGGCAGAAACCATCATCCAGAAAATCAAGCAGCA...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR TCA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAGTTTTGGTTTCGCCTaGGTTTCTTTTCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: MLKKQHKERHHPSILLITSFGFA*VSFHFL
Trigger: CAGGAAGTGAAAAGAAACTCAGGCGAAACCAAAACT...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CCA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCAAAAGGCACAATTTATTaGTTACGCAGACTTCCATCA +
Preference number: 4 (lower is better)
Translates to: KQHKERHHPSILLITKEAKGTIY*LRRLPS
Trigger: TGATGGAAGTCTGCGTAACCAATAAATTGTGCCTTT...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS TCA 90 bp CCCTTGGCTCTTGTCCCCGCCGGCCGCCCTGCCCTCGGCAGAGGATaGGCACGTGAAGGAGCGCAGCCGGGGCGCGGGCACCTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: PLALVPAGRPALGRG*AREGAQPGRGHLLA
Trigger: GGCAAGCAGGTGCCCGCGCCCCGGCTGCGCTCCTTCACGTGCTCATCCTCTGCCGAGGGCAGGGCGGCCGGCGGGGACAAGAGCCAAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS TCA 90 bp CCTGCTTGCCGGGCCCCTCGCCGCGATCAGCCTCCTGGGCTTTGGTaGGCACGATGCTGGGCGACAAGATGCCGGGTTCCGGGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: PACRAPRRDQPPGLW*ARCWATRCRVPGRA
Trigger: CGCCCTGCCCGGAACCCGGCATCTTGTCGCCCAGCATCGTGCTCACCAAAGCCCAGGAGGCTGATCGCGGCGAGGGGCCCGGCAAGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS GCA 90 bp CAGTCCTGCCTAGAGGCCCTGGTGGCCCCTCCTCCGGCCGGTGCTTaGCGTGATGCGGGAGCTCGGTGTTGTCGCGGTAGTCGCGGCCCT +
Preference number: 5 (lower is better)
Translates to: QSCLEALVAPPPAGA*RDAGARCCRGSRGP
Trigger: AGGGCCGCGACTACCGCGACAACACCGAGCTCCCGCATCACGGCAAGCACCGGCCGGAGGAGGGGCCACCAGGGCCTCTAGGCAGGACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CCA 90 bp GGCGCGGGCACCTGCTTGCCGGGCCCCTCGCCGCGATCAGCCTCCTaGGCTTTGGTGAGCACGATGCTGGGCGACAAGATGCCGGGTTCC +
Preference number: 5 (lower is better)
Translates to: GAGTCLPGPSPRSAS*ALVSTMLGDKMPGS
Trigger: GGAACCCGGCATCTTGTCGCCCAGCATCGTGCTCACCAAAGCCCAGGAGGCTGATCGCGGCGAGGGGCCCGGCAAGCAGGTGCCCGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCGGCTTCCCTTGGCTCTaGTCCCCGCCGGCCGCCCTG +
Preference number: 5 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLGFPWL*SPPAAL
Trigger: CAGGGCGGCCGGCGGGGACAAGAGCCAAGGGAAGCC...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CCA 90 bp GTCCTGGAAAGCAGCTCCTCCGCCTTGGAGCGGGTGATGTTGCCATaGTTCCAGCAGGGGACCATGGTGGGCGTGGGCCTCCTCGGCCGG +
Preference number: 5 (lower is better)
Translates to: VLESSSSALERVMLP*FQQGTMVGVGLLGR
Trigger: CCGGCCGAGGAGGCCCACGCCCACCATGGTCCCCTGCTGGAACCATGGCAACATCACCCGCTCCAAGGCGGAGGAGCTGCTTTCCAGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000629761.2
ENST00000630338.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCATTCTCGTGCTCAGGCTaGGCCAGCACCACGATGCGG +
Preference number: 5 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSFSCSG*ASTTMR
Trigger: CCGCATCGTGGTGCTGGCCAAGCCTGAGCACGAGAA...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCTCCGATCTGGAAGGCTaGATGGGCCTCTTGGCCGGC +
Preference number: 5 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLSDLEG*MGLLAG
Trigger: GCCGGCCAAGAGGCCCATCAAGCCTTCCAGATCGGA...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGGGGACCCAGACTGTTaGTTGCCCGTCTGGTGTGCG +
Preference number: 5 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSGDPDC*LPVWCA
Trigger: CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS TCA 90 bp CGTCCTTGCCTGTCCTGGAAAGCAGCTCCTCCGCCTTGGAGCGGGTaGTGTTGCCATGGTTCCAGCAGGGGACCATGGTGGGCGTGGGCC +
Preference number: 5 (lower is better)
Translates to: RPCLSWKAAPPPWSG*CCHGSSRGPWWAWA
Trigger: GGCCCACGCCCACCATGGTCCCCTGCTGGAACCATGGCAACATCACCCGCTCCAAGGCGGAGGAGCTGCTTTCCAGGACAGGCAAGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000629761.2
ENST00000630338.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGGCAACCTGCCGCCCGTaGCCTCTTGGTGGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPATCRP*PLGGLG
Trigger: GCCGAGGCCACCAAGAGGCAACGGGCGGCAGGTTGC...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAAGGAAGCTCCCGTCCTaGCCTGTCCTGGAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSRKLPS*PVLESS
Trigger: GCTGCTTTCCAGGACAGGCAAGGACGGGAGCTTCCT...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGTTCTCGTGCTCAGGCTaGGCCAGCACCACGATGCGG +
Preference number: 5 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQFSCSG*ASTTMR
Trigger: CCGCATCGTGGTGCTGGCCAAGCCTGAGCACGAGAA...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGGGCTTCCCTTGGCTCTaGTCCCCGCCGGCCGCCCTG +
Preference number: 5 (lower is better)
Translates to: KYQERAGDPDCLLPVWCAGFPWL*SPPAAL
Trigger: CAGGGCGGCCGGCGGGGACAAGAGCCAAGGGAAGCC...CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAACCCCCACGGCTCCCTaGTTCCCCAGTGTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVATPTAP*FPSVFA
Trigger: TGCAAACACACTGGGGAACAAGGGAGCCGTGGGGGT...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTAAGGGACTCAGCTTCTaGTCGCCCAGGGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSKGLSF*SPRARN
Trigger: GTTCCTGGCCCTGGGCGACAAGAAGCTGAGTCCCTT...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTCCCGGGACCGTTCTaGGAGACAAACTGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSVPGPF*ETNWEV
Trigger: CACTTCCCAGTTTGTCTCCAAGAACGGTCCCGGGAC...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCGGCTTCCCTTGGCTCTaGTCCCCGCCGGCCGCCCTG +
Preference number: 5 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLGFPWL*SPPAAL
Trigger: CAGGGCGGCCGGCGGGGACAAGAGCCAAGGGAAGCC...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTGGCTTCCCTTGGCTCTaGTCCCCGCCGGCCGCCCTG +
Preference number: 5 (lower is better)
Translates to: PRASWGPRLFVARLVCVFGFPWL*SPPAAL
Trigger: CAGGGCGGCCGGCGGGGACAAGAGCCAAGGGAAGCC...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGGGCTTGATGGGCCTCTaGGCCGGCACCGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQGLMGL*AGTGAW
Trigger: CCAGGCCCCGGTGCCGGCCAAGAGGCCCATCAAGCC...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGCTTAAGGCCGAGCCCTaGTCTCACTCCAGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQLKAEP*SHSRRA
Trigger: TGCCCTCCTGGAGTGAGACAAGGGCTCGGCCTTAAG...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAACCTGGCACAGGCCTaGGCATCTCTAGCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLNLAQA*ASLAQA
Trigger: AGCTTGGGCTAGAGATGCCAAGGCCTGTGCCAGGTT...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTGCAACCTGCCGCCCGTaGCCTCTTGGTGGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFATCRP*PLGGLG
Trigger: GCCGAGGCCACCAAGAGGCAACGGGCGGCAGGTTGC...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGATTGGAGCGGGTGATGTaGCCATGGTTCCAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: ALNEALGSQVPRASWGPRLERVM*PWFQQG
Trigger: CCCCTGCTGGAACCATGGCAACATCACCCGCTCCAA...TCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGGTCTTTCCCTGCCCCTaGGAGAGAAACCAGGACGTG +
Preference number: 5 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQVFPCP*ERNQDV
Trigger: CACGTCCTGGTTTCTCTCCAAGGGGCAGGGAAAGAC...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCATCTTGCAGGGAGTGTTaGAGGATCTCCAGCCACTCC +
Preference number: 5 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSSCREC*RISSHS
Trigger: GGAGTGGCTGGAGATCCTCAAACACTCCCTGCAAGA...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGGCTCTTCAGGGTCTTaGGCCCACTGGATTCATCAC +
Preference number: 5 (lower is better)
Translates to: GPGRGSSGFTPFLWAPDSGSSGS*AHWIHH
Trigger: GTGATGAATCCAGTGGGCCAAAGACCCTGAAGAGCC...TGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCGGCTTGATGGGCCTCTaGGCCGGCACCGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSGLMGL*AGTGAW
Trigger: CCAGGCCCCGGTGCCGGCCAAGAGGCCCATCAAGCC...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGGCCGCCCGTTGCCTCTaGGTGGCCTCGGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWAARCL*VASAAA
Trigger: GGCAGCAGCCGAGGCCACCAAGAGGCAACGGGCGGC...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGAGTCTTTCCCTGCCCCTaGGAGAGAAACCAGGACGTG +
Preference number: 5 (lower is better)
Translates to: ALNEALGSQVPRASWGPRVFPCP*ERNQDV
Trigger: CACGTCCTGGTTTCTCTCCAAGGGGCAGGGAAAGAC...TCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAACTCAGGGGGTCCTCTaGGGTGCCGATCACGTAAAT +
Preference number: 5 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVATQGVL*GADHVN
Trigger: ATTTACGTGATCGGCACCCAAGAGGACCCCCTGAGT...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGGCTCTTCAGGGTCTTaGGCCCACTGGATTCATCAC +
Preference number: 5 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVAGSSGS*AHWIHH
Trigger: GTGATGAATCCAGTGGGCCAAAGACCCTGAAGAGCC...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGGGCTCTTCAGGGTCTTaGGCCCACTGGATTCATCAC +
Preference number: 5 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQGSSGS*AHWIHH
Trigger: GTGATGAATCCAGTGGGCCAAAGACCCTGAAGAGCC...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTGGCTTGATGGGCCTCTaGGCCGGCACCGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: VARLVCVFLPASALGAKSGLMGL*AGTGAW
Trigger: CCAGGCCCCGGTGCCGGCCAAGAGGCCCATCAAGCC...AGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGACCCAGACTGTTTGTaGCCCGTCTGGTGTGCGTTT +
Preference number: 5 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSDPDCL*PVWCAF
Trigger: AAACGCACACCAGACGGGCAACAAACAGTCTGGGTC...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGGACCCAGACTGTTTGTaGCCCGTCTGGTGTGCGTTT +
Preference number: 5 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQDPDCL*PVWCAF
Trigger: AAACGCACACCAGACGGGCAACAAACAGTCTGGGTC...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CCA 90 bp CTTCTGAAGAAGCATGGCCTAGCAGGCATGGGTGGGCCAGAGAAGTaGTTCTTCTGCGGCCGTGCTGACACCCACGTGGGATGCCATGCC +
Preference number: 5 (lower is better)
Translates to: LLKKHGLAGMGGPEK*FFCGRADTHVGCHA
Trigger: GGCATGGCATCCCACGTGGGTGTCAGCACGGCCGCAGAAGAACCACTTCTCTGGCCCACCCATGCCTGCTAGGCCATGCTTCTTCAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CAA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGCAAGGCCTTGACCTaGTCTTCAATGGACGACAAC +
Preference number: 5 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLSKALT*SSMDDN
Trigger: GTTGTCGTCCATTGAAGACAAGGTCAAGGCCTTGCT...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTTCGTGCAGCAAGGCCTaGACCTTGTCTTCAATGGAC +
Preference number: 5 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSSCSKA*TLSSMD
Trigger: GTCCATTGAAGACAAGGTCAAGGCCTTGCTGCACGA...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGTCGTGCAGCAAGGCCTaGACCTTGTCTTCAATGGAC +
Preference number: 5 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQSCSKA*TLSSMD
Trigger: GTCCATTGAAGACAAGGTCAAGGCCTTGCTGCACGA...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCACCTAAGGAGGTTCCATaGAACATGAACGACACCCCC +
Preference number: 5 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVAPKEVP*NMNDTP
Trigger: GGGGGTGTCGTTCATGTTCAATGGAACCTCCTTAGG...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGGGCTTCCCTTGGCTCTaGTCCCCGCCGGCCGCCCTG +
Preference number: 5 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPGFPWL*SPPAAL
Trigger: CAGGGCGGCCGGCGGGGACAAGAGCCAAGGGAAGCC...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGAGGCTTGATGGGCCTCTaGGCCGGCACCGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: EARPFPENTKPCIGSWAGGLMGL*AGTGAW
Trigger: CCAGGCCCCGGTGCCGGCCAAGAGGCCCATCAAGCC...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS TCA 90 bp CCTGGCAACTGGTCGCAGCGTACAATTGAAGTGTCCAGTGGCAGCTaGAGTCCCCCTGGGTGGAATGACCGGCTCTGGAGACGTCAGGAG +
Preference number: 5 (lower is better)
Translates to: PGNWSQRTIEVSSGS*SPPGWNDRLWRRQE
Trigger: CTCCTGACGTCTCCAGAGCCGGTCATTCCACCCAGGGGGACTTCAGCTGCCACTGGACACTTCAATTGTACGCTGCGACCAGTTGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS GCA 90 bp TCTGCCTTCACCTCAAAGGTGACTGGAGGGATAAGGGAGGGCCGGTaGGGAGACTCAGGACCCTCGTGCAGCAAGGCCTTGACCTTGTCT +
Preference number: 5 (lower is better)
Translates to: SAFTSKVTGGIREGR*GDSGPSCSKALTLS
Trigger: AGACAAGGTCAAGGCCTTGCTGCACGAGGGTCCTGAGTCTCCGCACCGGCCCTCCCTTATCCCTCCAGTCACCTTTGAGGTGAAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS CCA 90 bp AACCTCCTTGGCCTCACAGGAGCTGGCAGTCAGCGGGATGTTTCTTaGGGGCAGCTCGGGTGGAGACACGACACTTTCTGTGTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: NLLGLTGAGSQRDVS*GQLGWRHDTFCVLL
Trigger: GAGGAGGACACAGAAAGTGTCGTGTCTCCACCCGAGCTGCCCCCAAGAAACATCCCGCTGACTGCCAGCTCCTGTGAGGCCAAGGAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000474278.2
ENST00000629761.2
ENST00000630466.1
CDS CCA 90 bp AGATGCTCTTCTGGAAGCCCACTGGTGTCCATGCTTTGCAGTCGCTaGAACAATGTCTCGGAGAGGCTCGGCCGGCTGGTCTCGGTCGCT +
Preference number: 5 (lower is better)
Translates to: RCSSGSPLVSMLCSR*NNVSERLGRLVSVA
Trigger: AGCGACCGAGACCAGCCGGCCGAGCCTCTCCGAGACATTGTTCCAGCGACTGCAAAGCATGGACACCAGTGGGCTTCCAGAAGAGCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000474278.2
ENST00000496402.2
ENST00000629761.2
ENST00000630338.2
ENST00000630466.1
ENST00000630854.3
ENST00000631055.1
CDS CCA 90 bp CACGGAGGGGCCCTGCTAGTGACTTCCCACTGCTTCATGGGGTCGTaGCTGGTGAGGCTCTTCAGGGTCTTTGGCCCACTGGATTCATCA +
Preference number: 5 (lower is better)
Translates to: HGGALLVTSHCFMGS*LVRLFRVFGPLDSS
Trigger: TGATGAATCCAGTGGGCCAAAGACCCTGAAGAGCCTCACCAGCCACGACCCCATGAAGCAGTGGGAAGTCACTAGCAGGGCCCCTCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCCACACTGGTGATTTCTaGCAGGGAGTGTTTGAGGAT +
Preference number: 5 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLHTGDF*QGVFED
Trigger: ATCCTCAAACACTCCCTGCAAGAAATCACCAGTGTG...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGATGCCTGTCTTCACGTaGTCAGTACAGATGTGGCTG +
Preference number: 5 (lower is better)
Translates to: GEGPVASRRSSGLPTQWQMPVFT*SVQMWL
Trigger: CAGCCACATCTGTACTGACAACGTGAAGACAGGCAT...CTGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTATGCCTGTCTTCACGTaGTCAGTACAGATGTGGCTG +
Preference number: 5 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSMPVFT*SVQMWL
Trigger: CAGCCACATCTGTACTGACAACGTGAAGACAGGCAT...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AGGAGCCAGCAGGAGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGAAGTCAAGTGGCTGTaGACGAACCCTAAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: RSQQEVPGEGPVASRRSSEVKWL*TNPKEV
Trigger: AACCTCCTTAGGGTTCGTCAACAGCCACTTGACTTC...AGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCTCCTGCTGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCGGCTTGATGGGCCTCTaGGCCGGCACCGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGGLMGL*AGTGAW
Trigger: CCAGGCCCCGGTGCCGGCCAAGAGGCCCATCAAGCC...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCTCCGATCTGGAAGGCTaGATGGGCCTCTTGGCCGGC +
Preference number: 5 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTSDLEG*MGLLAG
Trigger: GCCGGCCAAGAGGCCCATCAAGCCTTCCAGATCGGA...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGAACCTGGCACAGGCCTaGGCATCTCTAGCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPNLAQA*ASLAQA
Trigger: AGCTTGGGCTAGAGATGCCAAGGCCTGTGCCAGGTT...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS TCA 90 bp CGCCCGTTGCCTCTTGGTGGCCTCGGCTGCTGCCACCAGCTTAACTaGCTGACTTCCTGTTTCAGGCGCTCAGTGAGGGAAAGGAAACTG +
Preference number: 5 (lower is better)
Translates to: RPLPLGGLGCCHQLN*LTSCFRRSVRERKL
Trigger: CAGTTTCCTTTCCCTCACTGAGCGCCTGAAACAGGAAGTCAGTCAGTTAAGCTGGTGGCAGCAGCCGAGGCCACCAAGAGGCAACGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS TCA 90 bp CTTCCTCCTCGAAGTGTAGGAAGACCTTCTGCTCCCTCCTCTCTGTaGGCAGCTGGTCGTGGGACAGGAGGTCTGCGTACTGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LPPRSVGRPSAPSSL*AAGRGTGGLRTAAA
Trigger: AGCAGCAGCAGTACGCAGACCTCCTGTCCCACGACCAGCTGCTCACAGAGAGGAGGGAGCAGAAGGTCTTCCTACACTTCGAGGAGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000465281.1
ENST00000480983.1
ENST00000493632.5
ENST00000627169.2
ENST00000627349.1
ENST00000628814.2
ENST00000629540.1
ENST00000629761.2
ENST00000630854.3
CDS CCA 90 bp GGCTCTGGAGACGTCAGGAGAGTTGTGGCCACTTCTGAAGAAGCATaGCCTAGCAGGCATGGGTGGGCCAGAGAAGTGGTTCTTCTGCGG +
Preference number: 5 (lower is better)
Translates to: GSGDVRRVVATSEEA*PSRHGWAREVVLLR
Trigger: CCGCAGAAGAACCACTTCTCTGGCCCACCCATGCCTGCTAGGCCATGCTTCTTCAGAAGTGGCCACAACTCTCCTGACGTCTCCAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS CCA 90 bp TCCTGGGAGGGAGACCCCGGTTTGCTGTTGAGGGTAAAAACTTCTTaGGTGATATGGGCGGCTGGCCGGGAGGTGTCGGAGGACTTTCTC +
Preference number: 5 (lower is better)
Translates to: SWEGDPGLLLRVKTS*VIWAAGREVSEDFL
Trigger: GAGAAAGTCCTCCGACACCTCCCGGCCAGCCGCCCATATCACCCAAGAAGTTTTTACCCTCAACAGCAAACCGGGGTCTCCCTCCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS CCA 90 bp AACCTCCTTGGCCTCACAGGAGCTGGCAGTCAGCGGGATGTTTCTTaGGGGCAGCTCGGGTGGAGACACGACACTTTCTACTGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: NLLGLTGAGSQRDVS*GQLGWRHDTFYCVL
Trigger: GAGGACACAGTAGAAAGTGTCGTGTCTCCACCCGAGCTGCCCCCAAGAAACATCCCGCTGACTGCCAGCTCCTGTGAGGCCAAGGAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000445964.6
ENST00000451407.4
ENST00000496402.2
ENST00000630338.2
ENST00000630854.3
ENST00000631055.1
CDS-3UTR CAA 90 bp TTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCGCCGCCCGTTGCCTCTaGGTGGCCTCGGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: FIGYADFHHGNVGCIPFCAARCL*VASAAA
Trigger: GGCAGCAGCCGAGGCCACCAAGAGGCAACGGGCGGC...GCAGAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTAAGGGACTCAGCTTCTaGTCGCCCAGGGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFKGLSF*SPRARN
Trigger: GTTCCTGGCCCTGGGCGACAAGAAGCTGAGTCCCTT...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAGTGGCAGCGTACTGCTGCTGCTaGATTTTCTGGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: GRGSSGFTPFLWAPDSVAAYCCC*IFWMMV
Trigger: AACCATCATCCAGAAAATCAAGCAGCAGCAGTACGC...TGCCACTGAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCCCAGGTCACTGGGCCTaGACTCCTGTGTCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSPGHWA*TPVSWE
Trigger: CTCCCAGGACACAGGAGTCAAGGCCCAGTGACCTGG...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGATCCTTCCGCGGCATTTaGGGGGATTCCTGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: AQALASLAQAEARSLHWRSFRGI*GDSWSF
Trigger: GAAGGACCAGGAATCCCCCAAAATGCCGCGGAAGGA...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTGGCGGGGTCTGCTGGTaGATTTCCGATCTGGAAGGC +
Preference number: 5 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFGGVCW*ISDLEG
Trigger: GCCTTCCAGATCGGAAATCAACCAGCAGACCCCGCC...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS GCA 90 bp CCTGTCTTCACGTTGTCAGTACAGATGTGGCTGATCCGGTTCTCGTaGTCAGGCTTGGCCAGCACCACGATGCGGATGTTCCAGAGCGTG +
Preference number: 5 (lower is better)
Translates to: PVFTLSVQMWLIRFS*SGLASTTMRMFQSV
Trigger: CACGCTCTGGAACATCCGCATCGTGGTGCTGGCCAAGCCTGAGCACGAGAACCGGATCAGCCACATCTGTACTGACAACGTGAAGACAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000472517.1
ENST00000493078.1
ENST00000627169.2
ENST00000627243.1
ENST00000628466.1
ENST00000629761.2
ENST00000630854.3
CDS CCA 90 bp TGCTTTGCAGTCGCTGGAACAATGTCTCGGAGAGGCTCGGCCGGCTaGTCTCGGTCGCTCGGGGATTCTCGTTTGAAAAAGGAACCTCCT +
Preference number: 5 (lower is better)
Translates to: CFAVAGTMSRRGSAG*SRSLGDSRLKKEPP
Trigger: AGGAGGTTCCTTTTTCAAACGAGAATCCCCGAGCGACCGAGACCAGCCGGCCGAGCCTCTCCGAGACATTGTTCCAGCGACTGCAAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000474278.2
ENST00000496402.2
ENST00000629761.2
ENST00000630338.2
ENST00000630466.1
ENST00000630854.3
ENST00000631055.1
CDS-3UTR CAA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCAGCCGCCCGTTGCCTCTaGGTGGCCTCGGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPAARCL*VASAAA
Trigger: GGCAGCAGCCGAGGCCACCAAGAGGCAACGGGCGGC...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACAGCCGCCCGTTGCCTCTaGGTGGCCTCGGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: GHPDMTNVRKALSTALGTAARCL*VASAAA
Trigger: GGCAGCAGCCGAGGCCACCAAGAGGCAACGGGCGGC...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAGGAAGCTCCCGTCCTaGCCTGTCCTGGAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: VSQAVNSVGHTEARPFPERKLPS*PVLESS
Trigger: GCTGCTTTCCAGGACAGGCAAGGACGGGAGCTTCCT...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGAAAAAGGAACCTCCTaGGCCTCACAGGAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAEKGTS*ASQELA
Trigger: TGCCAGCTCCTGTGAGGCCAAGGAGGTTCCTTTTTC...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTGTCTTTCCCTGCCCCTaGGAGAGAAACCAGGACGTG +
Preference number: 5 (lower is better)
Translates to: PRASWGPRLFVARLVCVFVFPCP*ERNQDV
Trigger: CACGTCCTGGTTTCTCTCCAAGGGGCAGGGAAAGAC...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGGTCTTTCCCTGCCCCTaGGAGAGAAACCAGGACGTG +
Preference number: 5 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQVFPCP*ERNQDV
Trigger: CACGTCCTGGTTTCTCTCCAAGGGGCAGGGAAAGAC...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAGGAGGGCACTGGGCTTCTTAATGCTTTCACCCCTCCGAACACACACCGTTTTTTCTCGTGCTCAGGCTaGGCCAGCACCACGATGCGG +
Preference number: 5 (lower is better)
Translates to: QEGTGLLNAFTPPNTHRFFSCSG*ASTTMR
Trigger: CCGCATCGTGGTGCTGGCCAAGCCTGAGCACGAGAA...AAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAGAAGCCCAGTGCCCTCCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAACCCCCACGGCTCCCTaGTTCCCCAGTGTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: VSQAVNSVGHTEARPFPETPTAP*FPSVFA
Trigger: TGCAAACACACTGGGGAACAAGGGAGCCGTGGGGGT...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGCCAGGTCACTGGGCCTaGACTCCTGTGTCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: LAQAEARSLHWRIGADFLPGHWA*TPVSWE
Trigger: CTCCCAGGACACAGGAGTCAAGGCCCAGTGACCTGG...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCGGCTTCCCTTGGCTCTaGTCCCCGCCGGCCGCCCTG +
Preference number: 5 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFGFPWL*SPPAAL
Trigger: CAGGGCGGCCGGCGGGGACAAGAGCCAAGGGAAGCC...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTGGGGACCCAGACTGTTaGTTGCCCGTCTGGTGTGCG +
Preference number: 5 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTGDPDC*LPVWCA
Trigger: CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGGGACCCAGACTGTTaGTTGCCCGTCTGGTGTGCG +
Preference number: 5 (lower is better)
Translates to: PRLFVARLVCVFLPASALGDPDC*LPVWCA
Trigger: CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGAGACAGAACAGGCTTCTaGTACCCTAAACAAGCTACC +
Preference number: 5 (lower is better)
Translates to: ALNEALGSQVPRASWGPRDRTGF*YPKQAT
Trigger: GGTAGCTTGTTTAGGGTACAAGAAGCCTGTTCTGTC...TCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGAACCTGGCACAGGCCTaGGCATCTCTAGCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQNLAQA*ASLAQA
Trigger: AGCTTGGGCTAGAGATGCCAAGGCCTGTGCCAGGTT...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTGGTCGCAGCGTACAATaGAAGTGTCCAGTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFGRSVQ*KCPVAA
Trigger: AGCTGCCACTGGACACTTCAATTGTACGCTGCGACC...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CAA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTTGGAGCGGGTGATGTaGCCATGGTTCCAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTLERVM*PWFQQG
Trigger: CCCCTGCTGGAACCATGGCAACATCACCCGCTCCAA...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGAAGCAGCTCCTCCGCCTaGGAGCGGGTGATGTTGCCA +
Preference number: 5 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGSSSSA*ERVMLP
Trigger: TGGCAACATCACCCGCTCCAAGGCGGAGGAGCTGCT...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGAGGAAGCTCCCGTCCTaGCCTGTCCTGGAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: LAQAEARSLHWRIGADFLRKLPS*PVLESS
Trigger: GCTGCTTTCCAGGACAGGCAAGGACGGGAGCTTCCT...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTAGGAAGCTCCCGTCCTaGCCTGTCCTGGAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTRKLPS*PVLESS
Trigger: GCTGCTTTCCAGGACAGGCAAGGACGGGAGCTTCCT...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTCAGCGGCACAGGGTATaGCAGATGGGTCACCAGCCC +
Preference number: 5 (lower is better)
Translates to: RLFVARLVCVFLPASALGQRHRV*QMGHQP
Trigger: GGGCTGGTGACCCATCTGCAATACCCTGTGCCGCTG...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGGAAAAAGGAACCTCCTaGGCCTCACAGGAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQEKGTS*ASQELA
Trigger: TGCCAGCTCCTGTGAGGCCAAGGAGGTTCCTTTTTC...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGCAACAGGCTTGTCAGTaGGCTGAGCTTGGACACCAT +
Preference number: 5 (lower is better)
Translates to: KYQERAGDPDCLLPVWCAQQACQ*AELGHH
Trigger: ATGGTGTCCAAGCTCAGCCAACTGACAAGCCTGTTG...CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTACTCAGGGGGTCCTCTaGGGTGCCGATCACGTAAAT +
Preference number: 5 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFTQGVL*GADHVN
Trigger: ATTTACGTGATCGGCACCCAAGAGGACCCCCTGAGT...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTACTCAGGGGGTCCTCTaGGGTGCCGATCACGTAAAT +
Preference number: 5 (lower is better)
Translates to: PRASWGPRLFVARLVCVFTQGVL*GADHVN
Trigger: ATTTACGTGATCGGCACCCAAGAGGACCCCCTGAGT...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGTCTTGCAGGGAGTGTTaGAGGATCTCCAGCCACTCC +
Preference number: 5 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQSCREC*RISSHS
Trigger: GGAGTGGCTGGAGATCCTCAAACACTCCCTGCAAGA...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTCTCGTGCTCAGGCTaGGCCAGCACCACGATGCGG +
Preference number: 5 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGFSCSG*ASTTMR
Trigger: CCGCATCGTGGTGCTGGCCAAGCCTGAGCACGAGAA...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGAAGGGACTCAGCTTCTaGTCGCCCAGGGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVKGLSF*SPRARN
Trigger: GTTCCTGGCCCTGGGCGACAAGAAGCTGAGTCCCTT...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAGTCCCGGGACCGTTCTaGGAGACAAACTGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: VSQAVNSVGHTEARPFPEVPGPF*ETNWEV
Trigger: CACTTCCCAGTTTGTCTCCAAGAACGGTCCCGGGAC...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAGAGGGTAAAAACTTCTaGGGTGATATGGGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: AQALASLAQAEARSLHWREGKNF*GDMGGW
Trigger: CCAGCCGCCCATATCACCCAAGAAGTTTTTACCCTC...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGAGGGAGACCCCGGTTaGCTGTTGAGGGTAAAAACT +
Preference number: 5 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAEGDPG*LLRVKT
Trigger: AGTTTTTACCCTCAACAGCAAACCGGGGTCTCCCTC...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTCCAGGTCACTGGGCCTaGACTCCTGTGTCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: VNSVGHTEARPFPENTKPPGHWA*TPVSWE
Trigger: CTCCCAGGACACAGGAGTCAAGGCCCAGTGACCTGG...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTCCTTCCGCGGCATTTaGGGGGATTCCTGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSSFRGI*GDSWSF
Trigger: GAAGGACCAGGAATCCCCCAAAATGCCGCGGAAGGA...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTTCCGATCTGGAAGGCTaGATGGGCCTCTTGGCCGGC +
Preference number: 5 (lower is better)
Translates to: RLFVARLVCVFLPASALGSDLEG*MGLLAG
Trigger: GCCGGCCAAGAGGCCCATCAAGCCTTCCAGATCGGA...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTGGCGGGGTCTGCTGGTaGATTTCCGATCTGGAAGGC +
Preference number: 5 (lower is better)
Translates to: VARLVCVFLPASALGAKSGGVCW*ISDLEG
Trigger: GCCTTCCAGATCGGAAATCAACCAGCAGACCCCGCC...AGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTGACCCAGACTGTTTGTaGCCCGTCTGGTGTGCGTTT +
Preference number: 5 (lower is better)
Translates to: TKSELGTQTVCCPSGVRFDPDCL*PVWCAF
Trigger: AAACGCACACCAGACGGGCAACAAACAGTCTGGGTC...AAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGAGGGGACCCAGACTGTTaGTTGCCCGTCTGGTGTGCG +
Preference number: 5 (lower is better)
Translates to: EARPFPENTKPCIGSWAGGDPDC*LPVWCA
Trigger: CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGCACTTAGCACAGCACTaGGCACATCATGAGTGTTCG +
Preference number: 5 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPHLAQH*AHHECS
Trigger: CGAACACTCATGATGTGCCAAGTGCTGTGCTAAGTG...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS TCA 90 bp CTCCTTAGTGTGCAAATATGGCACAGCCAGGATGCAAAGGGCATTTaGGGCCACATTGGGTGTACAGAGGGCAGGGGACCAGGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: LLSVQIWHSQDAKGI*GHIGCTEGRGPGAA
Trigger: TGCTGCTCCTGGTCCCCTGCCCTCTGTACACCCAATGTGGCCTCAAATGCCCTTTGCATCCTGGCTGTGCCATATTTGCACACTAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493632.5
ENST00000628814.2
CDS GCA 90 bp GAGGTCTGCGTACTGCTGCTGCTTGATTTTCTGGATGATGGTTTCTaGCTCCTGGAACAAGAACATGCCCGGGCCTCTGGTGAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: EVCVLLLLDFLDDGF*LLEQEHARASGEKP
Trigger: GGGCTTCTCACCAGAGGCCCGGGCATGTTCTTGTTCCAGGAGGCAGAAACCATCATCCAGAAAATCAAGCAGCAGCAGTACGCAGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465281.1
ENST00000627349.1
CDS CCA 90 bp TGTAGGAAGACCTTCTGCTCCCTCCTCTCTGTGAGCAGCTGGTCGTaGGACAGGAGGTCTGCGTACTGCTGCTGCTTGATTTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: CRKTFCSLLSVSSWS*DRRSAYCCCLIFWM
Trigger: CATCCAGAAAATCAAGCAGCAGCAGTACGCAGACCTCCTGTCCCACGACCAGCTGCTCACAGAGAGGAGGGAGCAGAAGGTCTTCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000465281.1
ENST00000480983.1
ENST00000493632.5
ENST00000627169.2
ENST00000627349.1
ENST00000628814.2
ENST00000629540.1
ENST00000629761.2
ENST00000630854.3
CDS CCA 90 bp TCGAAGTGTAGGAAGACCTTCTGCTCCCTCCTCTCTGTGAGCAGCTaGTCGTGGGACAGGAGGTCTGCGTACTGCTGCTGCTTGATTTTC +
Preference number: 5 (lower is better)
Translates to: SKCRKTFCSLLSVSS*SWDRRSAYCCCLIF
Trigger: GAAAATCAAGCAGCAGCAGTACGCAGACCTCCTGTCCCACGACCAGCTGCTCACAGAGAGGAGGGAGCAGAAGGTCTTCCTACACTTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000465281.1
ENST00000480983.1
ENST00000493632.5
ENST00000627169.2
ENST00000627349.1
ENST00000628814.2
ENST00000629540.1
ENST00000629761.2
ENST00000630854.3
CDS CCA 90 bp CCACTGCTTCATGGGGTCGTGGCTGGTGAGGCTCTTCAGGGTCTTTaGCCCACTGGATTCATCACGCTCCGTCTTCACAAAGTCATAGAG +
Preference number: 5 (lower is better)
Translates to: PLLHGVVAGEALQGL*PTGFITLRLHKVIE
Trigger: CTCTATGACTTTGTGAAGACGGAGCGTGATGAATCCAGTGGGCCAAAGACCCTGAAGAGCCTCACCAGCCACGACCCCATGAAGCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CCA 90 bp TGGTCGTGGGACAGGAGGTCTGCGTACTGCTGCTGCTTGATTTTCTaGATGATGGTTTCTGCCTCCTGGAACAAGAACATGCCCGGGCCT +
Preference number: 5 (lower is better)
Translates to: WSWDRRSAYCCCLIF*MMVSASWNKNMPGP
Trigger: AGGCCCGGGCATGTTCTTGTTCCAGGAGGCAGAAACCATCATCCAGAAAATCAAGCAGCAGCAGTACGCAGACCTCCTGTCCCACGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465281.1
ENST00000627349.1
CDS-3UTR CAA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCAGCTGCCGCGGCTCTCTaGCCAGCCCTCTCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPAAAAL*PALSFL
Trigger: CAGGAAGGAGAGGGCTGGCAAGAGAGCCGCGGCAGC...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CAA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGTTGGAGCGGGTGATGTaGCCATGGTTCCAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPLERVM*PWFQQG
Trigger: CCCCTGCTGGAACCATGGCAACATCACCCGCTCCAA...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGAGCAGCTCCTCCGCCTaGGAGCGGGTGATGTTGCCA +
Preference number: 5 (lower is better)
Translates to: HTEARPFPENTKPCIGSWSSSSA*ERVMLP
Trigger: TGGCAACATCACCCGCTCCAAGGCGGAGGAGCTGCT...CCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCCAGCGGCACAGGGTATaGCAGATGGGTCACCAGCCC +
Preference number: 5 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGQRHRV*QMGHQP
Trigger: GGGCTGGTGACCCATCTGCAATACCCTGTGCCGCTG...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CGAACACACACCGTTTTAAACTGGTGGGTTTGGGCACGTGGTTTTAGGTGGCTACAGCGGCACAGGGTATaGCAGATGGGTCACCAGCCC +
Preference number: 5 (lower is better)
Translates to: RTHTVLNWWVWARGFRWLQRHRV*QMGHQP
Trigger: GGGCTGGTGACCCATCTGCAATACCCTGTGCCGCTG...TAGCCACCTAAAACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CGAACACACACCGTTTTAAACTGGTGGGTTTGGGCACGTGGTTTTAGGTGGCTATCAGCGGGATGTTTCTaGGGGGCAGCTCGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: RTHTVLNWWVWARGFRWLSAGCF*GAARVE
Trigger: CTCCACCCGAGCTGCCCCCAAGAAACATCCCGCTGA...TAGCCACCTAAAACCACGTGCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAACTGGTGTCCATGCTTaGCAGTCGCTGGAACAATGT +
Preference number: 5 (lower is better)
Translates to: AQALASLAQAEARSLHWRTGVHA*QSLEQC
Trigger: ACATTGTTCCAGCGACTGCAAAGCATGGACACCAGT...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AGGTCCCGGGAGAGGGTCCAGTGGCTTCACGCCGTTCCTCTGGGCTCCCGACTCAAGCCTTCTCTCTTTTaGGAGTCAGCAAAAACATAT +
Preference number: 5 (lower is better)
Translates to: RSRERVQWLHAVPLGSRLKPSLF*ESAKTY
Trigger: ATATGTTTTTGCTGACTCCAAAAAGAGAGAAGGCTT...GAGTCGGGAGCCCAGAGGAACGGCGTGAAGCCACTGGACCCTCTCCCGGGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAACTCAGGGGGTCCTCTaGGGTGCCGATCACGTAAAT +
Preference number: 5 (lower is better)
Translates to: VSQAVNSVGHTEARPFPETQGVL*GADHVN
Trigger: ATTTACGTGATCGGCACCCAAGAGGACCCCCTGAGT...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTACCCCCACGGCTCCCTaGTTCCCCAGTGTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: VNSVGHTEARPFPENTKPTPTAP*FPSVFA
Trigger: TGCAAACACACTGGGGAACAAGGGAGCCGTGGGGGT...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCACCCCCACGGCTCCCTaGTTCCCCAGTGTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: GMWGAFPSAFTHTTGFSSTPTAP*FPSVFA
Trigger: TGCAAACACACTGGGGAACAAGGGAGCCGTGGGGGT...GGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCACCAGGAAGGCAAGTaGTACTTCATCCCTGTCGCT +
Preference number: 5 (lower is better)
Translates to: PRASWGPRLFVARLVCVFHQEGK*YFIPVA
Trigger: AGCGACAGGGATGAAGTACAACTTGCCTTCCTGGTG...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGGAGGGAGACCCCGGTTaGCTGTTGAGGGTAAAAACT +
Preference number: 5 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQEGDPG*LLRVKT
Trigger: AGTTTTTACCCTCAACAGCAAACCGGGGTCTCCCTC...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCGAGGGAGACCCCGGTTaGCTGTTGAGGGTAAAAACT +
Preference number: 5 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLEGDPG*LLRVKT
Trigger: AGTTTTTACCCTCAACAGCAAACCGGGGTCTCCCTC...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCAGAGGGAGACCCCGGTTaGCTGTTGAGGGTAAAAACT +
Preference number: 5 (lower is better)
Translates to: PSNRRCSSFLQNGALNEAEGDPG*LLRVKT
Trigger: AGTTTTTACCCTCAACAGCAAACCGGGGTCTCCCTC...TGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAGGCGGGGTCTGCTGGTaGATTTCCGATCTGGAAGGC +
Preference number: 5 (lower is better)
Translates to: VGHTEARPFPENTKPCIGGGVCW*ISDLEG
Trigger: GCCTTCCAGATCGGAAATCAACCAGCAGACCCCGCC...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCGGCGGGGTCTGCTGGTaGATTTCCGATCTGGAAGGC +
Preference number: 5 (lower is better)
Translates to: GHTEARPFPENTKPCIGSGGVCW*ISDLEG
Trigger: GCCTTCCAGATCGGAAATCAACCAGCAGACCCCGCC...GCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCGACCCAGACTGTTTGTaGCCCGTCTGGTGTGCGTTT +
Preference number: 5 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSDPDCL*PVWCAF
Trigger: AAACGCACACCAGACGGGCAACAAACAGTCTGGGTC...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGGGGACCCAGACTGTTaGTTGCCCGTCTGGTGTGCG +
Preference number: 5 (lower is better)
Translates to: HTEARPFPENTKPCIGSWGDPDC*LPVWCA
Trigger: CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC...CCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTCACTTAGCACAGCACTaGGCACATCATGAGTGTTCG +
Preference number: 5 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAHLAQH*AHHECS
Trigger: CGAACACTCATGATGTGCCAAGTGCTGTGCTAAGTG...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTCTTAAGGCCGAGCCCTaGTCTCACTCCAGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: VNSVGHTEARPFPENTKPLKAEP*SHSRRA
Trigger: TGCCCTCCTGGAGTGAGACAAGGGCTCGGCCTTAAG...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCCTTAAGGCCGAGCCCTaGTCTCACTCCAGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: GHTEARPFPENTKPCIGSLKAEP*SHSRRA
Trigger: TGCCCTCCTGGAGTGAGACAAGGGCTCGGCCTTAAG...GCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ACTGGGGTCCCAAGTACCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGGACAGAACAGGCTTCTaGTACCCTAAACAAGCTACC +
Preference number: 5 (lower is better)
Translates to: TGVPSTKSELGTQTVCCPDRTGF*YPKQAT
Trigger: GGTAGCTTGTTTAGGGTACAAGAAGCCTGTTCTGTC...CGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGGTACTTGGGACCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAAAACCTGGCACAGGCCTaGGCATCTCTAGCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: ISTLKSALQFLSSEWRPQNLAQA*ASLAQA
Trigger: AGCTTGGGCTAGAGATGCCAAGGCCTGTGCCAGGTT...TTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAAACCTGGCACAGGCCTaGGCATCTCTAGCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTNLAQA*ASLAQA
Trigger: AGCTTGGGCTAGAGATGCCAAGGCCTGTGCCAGGTT...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGAACCTGGCACAGGCCTaGGCATCTCTAGCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVNLAQA*ASLAQA
Trigger: AGCTTGGGCTAGAGATGCCAAGGCCTGTGCCAGGTT...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS GCA 90 bp GTTCCCTGGACCAGCAGCTGCACATCACCTGGGAACCAGTGTGTTTaGAATGCCTGTCTTCACGTTGTCAGTACAGATGTGGCTGATCCG +
Preference number: 5 (lower is better)
Translates to: VPWTSSCTSPGNQCV*NACLHVVSTDVADP
Trigger: CGGATCAGCCACATCTGTACTGACAACGTGAAGACAGGCATTGCAAACACACTGGTTCCCAGGTGATGTGCAGCTGCTGGTCCAGGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472517.1
ENST00000627243.1
CDS GCA 90 bp GTGAGACTTAGCCCTCCAGCCCTGCTGCAGCAGAACTCCTTAGTGTaGAAATATGGCACAGCCAGGATGCAAAGGGCATTTGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: VRLSPPALLQQNSLV*KYGTARMQRAFEAT
Trigger: TGTGGCCTCAAATGCCCTTTGCATCCTGGCTGTGCCATATTTGCACACTAAGGAGTTCTGCTGCAGCAGGGCTGGAGGGCTAAGTCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493632.5
ENST00000628814.2
CDS CCA 90 bp GTGGTTCCCAAAGGGAGTTCCCTGGACCAGCAGCTGCACATCACCTaGGAACCAGTGTGTTTGCAATGCCTGTCTTCACGTTGTCAGTAC +
Preference number: 5 (lower is better)
Translates to: VVPKGSSLDQQLHIT*EPVCLQCLSSRCQY
Trigger: GTACTGACAACGTGAAGACAGGCATTGCAAACACACTGGTTCCCAGGTGATGTGCAGCTGCTGGTCCAGGGAACTCCCTTTGGGAACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472517.1
ENST00000627243.1
CDS-3UTR CAA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGGCAACCTGCCGCCCGTaGCCTCTTGGTGGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMATCRP*PLGGLG
Trigger: GCCGAGGCCACCAAGAGGCAACGGGCGGCAGGTTGC...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCAGCAGCTCCTCCGCCTaGGAGCGGGTGATGTTGCCA +
Preference number: 5 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPSSSSA*ERVMLP
Trigger: TGGCAACATCACCCGCTCCAAGGCGGAGGAGCTGCT...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGCAGCGGCACAGGGTATaGCAGATGGGTCACCAGCCC +
Preference number: 5 (lower is better)
Translates to: WRIGADFLLLPTKELRSQQRHRV*QMGHQP
Trigger: GGGCTGGTGACCCATCTGCAATACCCTGTGCCGCTG...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGTCAGCGGGATGTTTCTaGGGGGCAGCTCGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRSAGCF*GAARVE
Trigger: CTCCACCCGAGCTGCCCCCAAGAAACATCCCGCTGA...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCTCAGCGGGATGTTTCTaGGGGGCAGCTCGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: FIGYADFHHGNVGCIPFCSAGCF*GAARVE
Trigger: CTCCACCCGAGCTGCCCCCAAGAAACATCCCGCTGA...GCAGAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CACTGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCTCAGCGGGATGTTTCTaGGGGGCAGCTCGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: HWRIGADFLLLPTKELRSSAGCF*GAARVE
Trigger: CTCCACCCGAGCTGCCCCCAAGAAACATCCCGCTGA...GCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCTCGGGGATTCTCGTTaGAAAAAGGAACCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQLGDSR*KKEPPW
Trigger: CCAAGGAGGTTCCTTTTTCAAACGAGAATCCCCGAG...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCAACTGGTGTCCATGCTTaGCAGTCGCTGGAACAATGT +
Preference number: 5 (lower is better)
Translates to: PSNRRCSSFLQNGALNEATGVHA*QSLEQC
Trigger: ACATTGTTCCAGCGACTGCAAAGCATGGACACCAGT...TGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCAGCTTGGACACCATGTaGATGGGATTGGCCTCACCA +
Preference number: 5 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSSLDTM*MGLASP
Trigger: TGGTGAGGCCAATCCCATCAACATGGTGTCCAAGCT...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAGTCAGTTGGCTGAGCTaGGACACCATGTTGATGGGA +
Preference number: 5 (lower is better)
Translates to: VSQAVNSVGHTEARPFPEVSWLS*DTMLMG
Trigger: TCCCATCAACATGGTGTCCAAGCTCAGCCAACTGAC...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAACAACAGGCTTGTCAGTaGGCTGAGCTTGGACACCAT +
Preference number: 5 (lower is better)
Translates to: VSQAVNSVGHTEARPFPEQQACQ*AELGHH
Trigger: ATGGTGTCCAAGCTCAGCCAACTGACAAGCCTGTTG...TTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAACTCAGGGGGTCCTCTaGGGTGCCGATCACGTAAAT +
Preference number: 5 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTTQGVL*GADHVN
Trigger: ATTTACGTGATCGGCACCCAAGAGGACCCCCTGAGT...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGTCTTGCAGGGAGTGTTaGAGGATCTCCAGCCACTCC +
Preference number: 5 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVSCREC*RISSHS
Trigger: GGAGTGGCTGGAGATCCTCAAACACTCCCTGCAAGA...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTCTTGCAGGGAGTGTTaGAGGATCTCCAGCCACTCC +
Preference number: 5 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTSCREC*RISSHS
Trigger: GGAGTGGCTGGAGATCCTCAAACACTCCCTGCAAGA...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CACTGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCTTCTCGTGCTCAGGCTaGGCCAGCACCACGATGCGG +
Preference number: 5 (lower is better)
Translates to: HWRIGADFLLLPTKELRSFSCSG*ASTTMR
Trigger: CCGCATCGTGGTGCTGGCCAAGCCTGAGCACGAGAA...GCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGTTCTCGTGCTCAGGCTaGGCCAGCACCACGATGCGG +
Preference number: 5 (lower is better)
Translates to: WRIGADFLLLPTKELRSQFSCSG*ASTTMR
Trigger: CCGCATCGTGGTGCTGGCCAAGCCTGAGCACGAGAA...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCATGTTCCCCAGTGTGTTaGCAATGCCTGTCTTCACGT +
Preference number: 5 (lower is better)
Translates to: PSNRRCSSFLQNGALNEACSPVC*QCLSSR
Trigger: ACGTGAAGACAGGCATTGCAAACACACTGGGGAACA...TGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGTGTTCCCCAGTGTGTTaGCAATGCCTGTCTTCACGT +
Preference number: 5 (lower is better)
Translates to: GDPDCLLPVWCAFFFQPQCSPVC*QCLSSR
Trigger: ACGTGAAGACAGGCATTGCAAACACACTGGGGAACA...CTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCTGTTCCCCAGTGTGTTaGCAATGCCTGTCTTCACGT +
Preference number: 5 (lower is better)
Translates to: LGTQTVCCPSGVRFSSSLCSPVC*QCLSSR
Trigger: ACGTGAAGACAGGCATTGCAAACACACTGGGGAACA...GAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGACCCCCACGGCTCCCTaGTTCCCCAGTGTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: HTEARPFPENTKPCIGSWTPTAP*FPSVFA
Trigger: TGCAAACACACTGGGGAACAAGGGAGCCGTGGGGGT...CCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTGAAGTCAAGTGGCTGTaGACGAACCCTAAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: PRASWGPRLFVARLVCVFEVKWL*TNPKEV
Trigger: AACCTCCTTAGGGTTCGTCAACAGCCACTTGACTTC...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCAAGAGCGAGCTGCGTACTGCTGCTGCTaGATTTTCTGGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: FRMAPSTRHWGPKYQERAAYCCC*IFWMMV
Trigger: AACCATCATCCAGAAAATCAAGCAGCAGCAGTACGC...AGCTCGCTCTTGGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCGTCCCGGGACCGTTCTaGGAGACAAACTGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: GHTEARPFPENTKPCIGSVPGPF*ETNWEV
Trigger: CACTTCCCAGTTTGTCTCCAAGAACGGTCCCGGGAC...GCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGAGTCCCGGGACCGTTCTaGGAGACAAACTGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: EARPFPENTKPCIGSWAGVPGPF*ETNWEV
Trigger: CACTTCCCAGTTTGTCTCCAAGAACGGTCCCGGGAC...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCCAGGTCACTGGGCCTaGACTCCTGTGTCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSPGHWA*TPVSWE
Trigger: CTCCCAGGACACAGGAGTCAAGGCCCAGTGACCTGG...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTTCCTTCCGCGGCATTTaGGGGGATTCCTGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: RLFVARLVCVFLPASALGSFRGI*GDSWSF
Trigger: GAAGGACCAGGAATCCCCCAAAATGCCGCGGAAGGA...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCTCCGATCTGGAAGGCTaGATGGGCCTCTTGGCCGGC +
Preference number: 5 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSSDLEG*MGLLAG
Trigger: GCCGGCCAAGAGGCCCATCAAGCCTTCCAGATCGGA...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCTCCGATCTGGAAGGCTaGATGGGCCTCTTGGCCGGC +
Preference number: 5 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPSDLEG*MGLLAG
Trigger: GCCGGCCAAGAGGCCCATCAAGCCTTCCAGATCGGA...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CACTGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCTCCGATCTGGAAGGCTaGATGGGCCTCTTGGCCGGC +
Preference number: 5 (lower is better)
Translates to: HWRIGADFLLLPTKELRSSDLEG*MGLLAG
Trigger: GCCGGCCAAGAGGCCCATCAAGCCTTCCAGATCGGA...GCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGGGGGACCCAGACTGTTaGTTGCCCGTCTGGTGTGCG +
Preference number: 5 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRGDPDC*LPVWCA
Trigger: CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS GCA 90 bp AACAGTCCCGGGACCGTTCTTGGAGACAAACTGGGAAGTGACTCCTaGCTCAAATGTGGCAAAGACAGGGCTGTGGTCACTCGTCATGAT +
Preference number: 5 (lower is better)
Translates to: NSPGTVLGDKLGSDS*LKCGKDRAVVTRHD
Trigger: ATCATGACGAGTGACCACAGCCCTGTCTTTGCCACATTTGAGGCAGGAGTCACTTCCCAGTTTGTCTCCAAGAACGGTCCCGGGACTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000465281.1
ENST00000627169.2
ENST00000627349.1
ENST00000629761.2
ENST00000630854.3
CDS GCA 90 bp CCACATTGGGTGTACAGAGGGCAGGGGACCAGGAGCAGCAGCATCTaGTCAGCAGAGAATCAGAACAGTGAAGATTCTAGATGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: PHWVYRGQGTRSSSI*SAENQNSEDSRWLS
Trigger: AGACAGCCATCTAGAATCTTCACTGTTCTGATTCTCTGCTGAGCAGATGCTGCTGCTCCTGGTCCCCTGCCCTCTGTACACCCAATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493632.5
ENST00000628814.2
CDS GCA 90 bp ACATGCACACACATATGCATAGGTACACACATACGCACTCACGCATaGACACACACACAAATGCACACGAACCCACGTGTGGCGCAGCGC +
Preference number: 5 (lower is better)
Translates to: TCTHICIGTHIRTHA*THTQMHTNPRVAQR
Trigger: GCGCTGCGCCACACGTGGGTTCGTGTGCATTTGTGTGTGTGTGCATGCGTGAGTGCGTATGTGTGTACCTATGCATATGTGTGTGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS-3UTR CAA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGAGACGTCAGGAGAGTaGTGGCCACTTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: PRLFVARLVCVFLPASALETSGE*WPLLKK
Trigger: CTTCTTCAGAAGTGGCCACAACTCTCCTGACGTCTC...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CAA 90 bp CACTGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCTTGGAGCGGGTGATGTaGCCATGGTTCCAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: HWRIGADFLLLPTKELRSLERVM*PWFQQG
Trigger: CCCCTGCTGGAACCATGGCAACATCACCCGCTCCAA...GCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCAAGCAGCTCCTCCGCCTaGGAGCGGGTGATGTTGCCA +
Preference number: 5 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPSSSSA*ERVMLP
Trigger: TGGCAACATCACCCGCTCCAAGGCGGAGGAGCTGCT...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGGAAAAAGGAACCTCCTaGGCCTCACAGGAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPEKGTS*ASQELA
Trigger: TGCCAGCTCCTGTGAGGCCAAGGAGGTTCCTTTTTC...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTGTCAGTTGGCTGAGCTaGGACACCATGTTGATGGGA +
Preference number: 5 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTVSWLS*DTMLMG
Trigger: TCCCATCAACATGGTGTCCAAGCTCAGCCAACTGAC...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGGTCAGTTGGCTGAGCTaGGACACCATGTTGATGGGA +
Preference number: 5 (lower is better)
Translates to: LAQAEARSLHWRIGADFLVSWLS*DTMLMG
Trigger: TCCCATCAACATGGTGTCCAAGCTCAGCCAACTGAC...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCAACAGGCTTGTCAGTaGGCTGAGCTTGGACACCAT +
Preference number: 5 (lower is better)
Translates to: VARLVCVFLPASALGAKSQQACQ*AELGHH
Trigger: ATGGTGTCCAAGCTCAGCCAACTGACAAGCCTGTTG...AGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCAGCAAGGCCTTGACCTaGTCTTCAATGGACGACAAC +
Preference number: 5 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSSKALT*SSMDDN
Trigger: GTTGTCGTCCATTGAAGACAAGGTCAAGGCCTTGCT...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGACCCCCACGGCTCCCTaGTTCCCCAGTGTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRTPTAP*FPSVFA
Trigger: TGCAAACACACTGGGGAACAAGGGAGCCGTGGGGGT...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCCTAAGGAGGTTCCATaGAACATGAACGACACCCCC +
Preference number: 5 (lower is better)
Translates to: VARLVCVFLPASALGAKSPKEVP*NMNDTP
Trigger: GGGGGTGTCGTTCATGTTCAATGGAACCTCCTTAGG...AGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTCCTAAGGAGGTTCCATaGAACATGAACGACACCCCC +
Preference number: 5 (lower is better)
Translates to: PRLFVARLVCVFLPASALPKEVP*NMNDTP
Trigger: GGGGGTGTCGTTCATGTTCAATGGAACCTCCTTAGG...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACACCTAAGGAGGTTCCATaGAACATGAACGACACCCCC +
Preference number: 5 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTPKEVP*NMNDTP
Trigger: GGGGGTGTCGTTCATGTTCAATGGAACCTCCTTAGG...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CACTGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCAAGGGACTCAGCTTCTaGTCGCCCAGGGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: HWRIGADFLLLPTKELRSKGLSF*SPRARN
Trigger: GTTCCTGGCCCTGGGCGACAAGAAGCTGAGTCCCTT...GCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGAAGGGACTCAGCTTCTaGTCGCCCAGGGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: WRIGADFLLLPTKELRSQKGLSF*SPRARN
Trigger: GTTCCTGGCCCTGGGCGACAAGAAGCTGAGTCCCTT...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CCAAGAGCGAGCTGGGGACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTGCGTACTGCTGCTGCTaGATTTTCTGGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: PRASWGPRLFVARLVCVFAYCCC*IFWMMV
Trigger: AACCATCATCCAGAAAATCAAGCAGCAGCAGTACGC...AAAAACGCACACCAGACGGGCAACAAACAGTCTGGGTCCCCAGCTCGCTCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACACACCAGGAAGGCAAGTaGTACTTCATCCCTGTCGCT +
Preference number: 5 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTHQEGK*YFIPVA
Trigger: AGCGACAGGGATGAAGTACAACTTGCCTTCCTGGTG...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGAAACTCAATCTGTCCTaGGCTGTCAACAGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: QTVCCPSGVRFSSSLSTWKLNLS*AVNSPG
Trigger: CCCGGGACTGTTGACAGCCAAGGACAGATTGAGTTT...CCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGTCGCTGTCAGAGGACTaGATGCTGATGAGGATGTGC +
Preference number: 5 (lower is better)
Translates to: LAQAEARSLHWRIGADFLSLSED*MLMRMC
Trigger: GCACATCCTCATCAGCATCAAGTCCTCTGACAGCGA...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAGGCTCTTCAGGGTCTTaGGCCCACTGGATTCATCAC +
Preference number: 5 (lower is better)
Translates to: VGHTEARPFPENTKPCIGGSSGS*AHWIHH
Trigger: GTGATGAATCCAGTGGGCCAAAGACCCTGAAGAGCC...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTGAGGGTAAAAACTTCTaGGGTGATATGGGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTEGKNF*GDMGGW
Trigger: CCAGCCGCCCATATCACCCAAGAAGTTTTTACCCTC...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTGAGGGTAAAAACTTCTaGGGTGATATGGGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: VARLVCVFLPASALGAKSEGKNF*GDMGGW
Trigger: CCAGCCGCCCATATCACCCAAGAAGTTTTTACCCTC...AGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAGCACTTGGTGCTAAGTCTCACAGGCAGTGAACTCTGTGGGCCACACAGAAGCGACCCCGGTTTGCTGTaGAGGGTAAAAACTTCTTGG +
Preference number: 5 (lower is better)
Translates to: QHLVLSLTGSELCGPHRSDPGLL*RVKTSW
Trigger: CCAAGAAGTTTTTACCCTCAACAGCAAACCGGGGTC...GCTTCTGTGTGGCCCACAGAGTTCACTGCCTGTGAGACTTAGCACCAAGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGAGGGAGACCCCGGTTaGCTGTTGAGGGTAAAAACT +
Preference number: 5 (lower is better)
Translates to: PRLFVARLVCVFLPASALEGDPG*LLRVKT
Trigger: AGTTTTTACCCTCAACAGCAAACCGGGGTCTCCCTC...AAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACACCAGGTCACTGGGCCTaGACTCCTGTGTCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: GHPDMTNVRKALSTALGTPGHWA*TPVSWE
Trigger: CTCCCAGGACACAGGAGTCAAGGCCCAGTGACCTGG...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAAGGCTTGATGGGCCTCTaGGCCGGCACCGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQGLMGL*AGTGAW
Trigger: CCAGGCCCCGGTGCCGGCCAAGAGGCCCATCAAGCC...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCGGCGGGGTCTGCTGGTaGATTTCCGATCTGGAAGGC +
Preference number: 5 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSGGVCW*ISDLEG
Trigger: GCCTTCCAGATCGGAAATCAACCAGCAGACCCCGCC...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTGACCCAGACTGTTTGTaGCCCGTCTGGTGTGCGTTT +
Preference number: 5 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSDPDCL*PVWCAF
Trigger: AAACGCACACCAGACGGGCAACAAACAGTCTGGGTC...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTGACCCAGACTGTTTGTaGCCCGTCTGGTGTGCGTTT +
Preference number: 5 (lower is better)
Translates to: VNSVGHTEARPFPENTKPDPDCL*PVWCAF
Trigger: AAACGCACACCAGACGGGCAACAAACAGTCTGGGTC...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCGGGGACCCAGACTGTTaGTTGCCCGTCTGGTGTGCG +
Preference number: 5 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFGDPDC*LPVWCA
Trigger: CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CCA 90 bp AAGGCCTTGACCTTGTCTTCAATGGACGACAACAGGCTTGTCAGTTaGCTGAGCTTGGACACCATGTTGATGGGATTGGCCTCACCAGGA +
Preference number: 5 (lower is better)
Translates to: KALTLSSMDDNRLVS*LSLDTMLMGLASPG
Trigger: TCCTGGTGAGGCCAATCCCATCAACATGGTGTCCAAGCTCAGCCAACTGACAAGCCTGTTGTCGTCCATTGAAGACAAGGTCAAGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS CCA 90 bp AGGGAAGGTGTCTATGAAGAGGACTCACCCCTGTCGCTTTCTGCTTaGTGTAGGCGTATTTGTCCCGAGTCAGTCTCTCAAAACGGTAGG +
Preference number: 5 (lower is better)
Translates to: REGVYEEDSPLSLSA*CRRICPESVSQNGR
Trigger: CCTACCGTTTTGAGAGACTGACTCGGGACAAATACGCCTACACCAAGCAGAAAGCGACAGGGGTGAGTCCTCTTCATAGACACCTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480983.1
ENST00000629540.1
CDS-3UTR CAA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGAGAGACGTCAGGAGAGTaGTGGCCACTTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGETSGE*WPLLKK
Trigger: CTTCTTCAGAAGTGGCCACAACTCTCCTGACGTCTC...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CAA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTCGGGGATTCTCGTTaGAAAAAGGAACCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVLGDSR*KKEPPW
Trigger: CCAAGGAGGTTCCTTTTTCAAACGAGAATCCCCGAG...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGAGCTTGGACACCATGTaGATGGGATTGGCCTCACCA +
Preference number: 5 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPSLDTM*MGLASP
Trigger: TGGTGAGGCCAATCCCATCAACATGGTGTCCAAGCT...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAAGCAAGGCCTTGACCTaGTCTTCAATGGACGACAAC +
Preference number: 5 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTSKALT*SSMDDN
Trigger: GTTGTCGTCCATTGAAGACAAGGTCAAGGCCTTGCT...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTAGCAAGGCCTTGACCTaGTCTTCAATGGACGACAAC +
Preference number: 5 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTSKALT*SSMDDN
Trigger: GTTGTCGTCCATTGAAGACAAGGTCAAGGCCTTGCT...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTTCGTGCAGCAAGGCCTaGACCTTGTCTTCAATGGAC +
Preference number: 5 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSSCSKA*TLSSMD
Trigger: GTCCATTGAAGACAAGGTCAAGGCCTTGCTGCACGA...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCGTCTTTCCCTGCCCCTaGGAGAGAAACCAGGACGTG +
Preference number: 5 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPVFPCP*ERNQDV
Trigger: CACGTCCTGGTTTCTCTCCAAGGGGCAGGGAAAGAC...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CACTGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCGTCTTTCCCTGCCCCTaGGAGAGAAACCAGGACGTG +
Preference number: 5 (lower is better)
Translates to: HWRIGADFLLLPTKELRSVFPCP*ERNQDV
Trigger: CACGTCCTGGTTTCTCTCCAAGGGGCAGGGAAAGAC...GCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCTCTTGCAGGGAGTGTTaGAGGATCTCCAGCCACTCC +
Preference number: 5 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGSCREC*RISSHS
Trigger: GGAGTGGCTGGAGATCCTCAAACACTCCCTGCAAGA...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAATAGGAGCTGATTTCCTGTGTTCCCCAGTGTGTTaGCAATGCCTGTCTTCACGT +
Preference number: 5 (lower is better)
Translates to: LAQAEARSLHWRIGADFLCSPVC*QCLSSR
Trigger: ACGTGAAGACAGGCATTGCAAACACACTGGGGAACA...CAGGAAATCAGCTCCTATTCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGACCTAAGGAGGTTCCATaGAACATGAACGACACCCCC +
Preference number: 5 (lower is better)
Translates to: VGHTEARPFPENTKPCIGPKEVP*NMNDTP
Trigger: GGGGGTGTCGTTCATGTTCAATGGAACCTCCTTAGG...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ACCCAGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTGAAGTCAAGTGGCTGTaGACGAACCCTAAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: TQTVCCPSGVRFSSSLSTEVKWL*TNPKEV
Trigger: AACCTCCTTAGGGTTCGTCAACAGCCACTTGACTTC...AGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGACACCAGGAAGGCAAGTaGTACTTCATCCCTGTCGCT +
Preference number: 5 (lower is better)
Translates to: VGHTEARPFPENTKPCIGHQEGK*YFIPVA
Trigger: AGCGACAGGGATGAAGTACAACTTGCCTTCCTGGTG...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCGTCCCGGGACCGTTCTaGGAGACAAACTGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: GTIYWLRRLPSWECGVHSVPGPF*ETNWEV
Trigger: CACTTCCCAGTTTGTCTCCAAGAACGGTCCCGGGAC...GGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGGTCCCGGGACCGTTCTaGGAGACAAACTGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: WRIGADFLLLPTKELRSQVPGPF*ETNWEV
Trigger: CACTTCCCAGTTTGTCTCCAAGAACGGTCCCGGGAC...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCAAACTCAATCTGTCCTaGGCTGTCAACAGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: GMWGAFPSAFTHTTGFSSKLNLS*AVNSPG
Trigger: CCCGGGACTGTTGACAGCCAAGGACAGATTGAGTTT...GGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTTCGCTGTCAGAGGACTaGATGCTGATGAGGATGTGC +
Preference number: 5 (lower is better)
Translates to: RLFVARLVCVFLPASALGSLSED*MLMRMC
Trigger: GCACATCCTCATCAGCATCAAGTCCTCTGACAGCGA...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGATCGCTGTCAGAGGACTaGATGCTGATGAGGATGTGC +
Preference number: 5 (lower is better)
Translates to: EARPFPENTKPCIGSWAGSLSED*MLMRMC
Trigger: GCACATCCTCATCAGCATCAAGTCCTCTGACAGCGA...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAGAGGGTAAAAACTTCTaGGGTGATATGGGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: VGHTEARPFPENTKPCIGEGKNF*GDMGGW
Trigger: CCAGCCGCCCATATCACCCAAGAAGTTTTTACCCTC...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCACTTAGCACAGCACTaGGCACATCATGAGTGTTCG +
Preference number: 5 (lower is better)
Translates to: DCLLPVWCAFFFQPQHLVHLAQH*AHHECS
Trigger: CGAACACTCATGATGTGCCAAGTGCTGTGCTAAGTG...CACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCCTTAAGGCCGAGCCCTaGTCTCACTCCAGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFLKAEP*SHSRRA
Trigger: TGCCCTCCTGGAGTGAGACAAGGGCTCGGCCTTAAG...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GCACAGGCCTTGGCATCTCTAGCCCAAGCTGAGGCCAGATCTCTCCACTGGAGAGAAAGGCACAATTTATaGGTTACGCAGACTTCCATC +
Preference number: 5 (lower is better)
Translates to: AQALASLAQAEARSLHWRERHNL*VTQTSI
Trigger: GATGGAAGTCTGCGTAACCAATAAATTGTGCCTTTC...TCTCCAGTGGAGAGATCTGGCCTCAGCTTGGGCTAGAGATGCCAAGGCCTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS TCA 90 bp GGTAGAATTTGGTCTGGGACTTGGTCTTCAATGTGGCATAGCACCTaGGAAACTCAATCTGTCCTTGGCTGTCAACAGTCCCGGGACCGT +
Preference number: 5 (lower is better)
Translates to: GRIWSGTWSSMWHST*ETQSVLGCQQSRDR
Trigger: ACGGTCCCGGGACTGTTGACAGCCAAGGACAGATTGAGTTTCTCAGGTGCTATGCCACATTGAAGACCAAGTCCCAGACCAAATTCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGGAAAAAGGAACCTCCTaGGCCTCACAGGAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: EQASCTLNKLPRLFSSLREKGTS*ASQELA
Trigger: TGCCAGCTCCTGTGAGGCCAAGGAGGTTCCTTTTTC...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGACTCGGGGATTCTCGTTaGAAAAAGGAACCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: VGHTEARPFPENTKPCIGLGDSR*KKEPPW
Trigger: CCAAGGAGGTTCCTTTTTCAAACGAGAATCCCCGAG...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGACTGGTGTCCATGCTTaGCAGTCGCTGGAACAATGT +
Preference number: 5 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPTGVHA*QSLEQC
Trigger: ACATTGTTCCAGCGACTGCAAAGCATGGACACCAGT...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTACTGGTGTCCATGCTTaGCAGTCGCTGGAACAATGT +
Preference number: 5 (lower is better)
Translates to: RLFVARLVCVFLPASALGTGVHA*QSLEQC
Trigger: ACATTGTTCCAGCGACTGCAAAGCATGGACACCAGT...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAAGCTTGGACACCATGTaGATGGGATTGGCCTCACCA +
Preference number: 5 (lower is better)
Translates to: SVGHTEARPFPENTKPCISLDTM*MGLASP
Trigger: TGGTGAGGCCAATCCCATCAACATGGTGTCCAAGCT...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GCACAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCACTCAGGGGGTCCTCTaGGGTGCCGATCACGTAAAT +
Preference number: 5 (lower is better)
Translates to: AQFIGYADFHHGNVGCIPTQGVL*GADHVN
Trigger: ATTTACGTGATCGGCACCCAAGAGGACCCCCTGAGT...GGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAATGCCTGTCTTCACGTaGTCAGTACAGATGTGGCTG +
Preference number: 5 (lower is better)
Translates to: VGHTEARPFPENTKPCIGMPVFT*SVQMWL
Trigger: CAGCCACATCTGTACTGACAACGTGAAGACAGGCAT...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAGAAGTCAAGTGGCTGTaGACGAACCCTAAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: VGHTEARPFPENTKPCIGEVKWL*TNPKEV
Trigger: AACCTCCTTAGGGTTCGTCAACAGCCACTTGACTTC...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCCACCAGGAAGGCAAGTaGTACTTCATCCCTGTCGCT +
Preference number: 5 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGHQEGK*YFIPVA
Trigger: AGCGACAGGGATGAAGTACAACTTGCCTTCCTGGTG...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCAAACTCAATCTGTCCTaGGCTGTCAACAGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGKLNLS*AVNSPG
Trigger: CCCGGGACTGTTGACAGCCAAGGACAGATTGAGTTT...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATATCGCTGTCAGAGGACTaGATGCTGATGAGGATGTGC +
Preference number: 5 (lower is better)
Translates to: SVGHTEARPFPENTKPCISLSED*MLMRMC
Trigger: GCACATCCTCATCAGCATCAAGTCCTCTGACAGCGA...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGAGGGTAAAAACTTCTaGGGTGATATGGGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: SVGHTEARPFPENTKPCIEGKNF*GDMGGW
Trigger: CCAGCCGCCCATATCACCCAAGAAGTTTTTACCCTC...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTGAACTCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTGACCCCGGTTTGCTGTaGAGGGTAAAAACTTCTTGG +
Preference number: 5 (lower is better)
Translates to: VNSVGHTEARPFPENTKPDPGLL*RVKTSW
Trigger: CCAAGAAGTTTTTACCCTCAACAGCAAACCGGGGTC...AGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGAGTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTCCAGGTCACTGGGCCTaGACTCCTGTGTCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSPGHWA*TPVSWE
Trigger: CTCCCAGGACACAGGAGTCAAGGCCCAGTGACCTGG...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCTCCTTCCGCGGCATTTaGGGGGATTCCTGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFSFRGI*GDSWSF
Trigger: GAAGGACCAGGAATCCCCCAAAATGCCGCGGAAGGA...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGGGGGACCCAGACTGTTaGTTGCCCGTCTGGTGTGCG +
Preference number: 5 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMGDPDC*LPVWCA
Trigger: CGCACACCAGACGGGCAACAAACAGTCTGGGTCCCC...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AGACTGTTTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTCACTTAGCACAGCACTaGGCACATCATGAGTGTTCG +
Preference number: 5 (lower is better)
Translates to: RLFVARLVCVFLPASALGHLAQH*AHHECS
Trigger: CGAACACTCATGATGTGCCAAGTGCTGTGCTAAGTG...ACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAAACAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGACACTTAGCACAGCACTaGGCACATCATGAGTGTTCG +
Preference number: 5 (lower is better)
Translates to: VGHTEARPFPENTKPCIGHLAQH*AHHECS
Trigger: CGAACACTCATGATGTGCCAAGTGCTGTGCTAAGTG...TCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAGTTCCTTTCTTCAGAATGGCGCCCTCAACGAGGCACTGGGGTCCCAAGTACCGAAAGGCACAATTTATaGGTTACGCAGACTTCCATC +
Preference number: 5 (lower is better)
Translates to: QFLSSEWRPQRGTGVPSTERHNL*VTQTSI
Trigger: GATGGAAGTCTGCGTAACCAATAAATTGTGCCTTTC...GGTACTTGGGACCCCAGTGCCTCGTTGAGGGCGCCATTCTGAAGAAAGGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS TCA 90 bp CAATCGTCTTGCATCAGAGATAGCAAGGATGAATCTCTAGTCCAGTaGCACTACATCTCCCAGGGACACCTCTGGGACACAGAGAACCAC +
Preference number: 5 (lower is better)
Translates to: QSSCIRDSKDESLVQ*HYISQGHLWDTENH
Trigger: GTGGTTCTCTGTGTCCCAGAGGTGTCCCTGGGAGATGTAGTGTCACTGGACTAGAGATTCATCCTTGCTATCTCTGATGCAAGACGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467393.5
ENST00000627806.2
CDS GCA 90 bp CTGACTTCCTGTTTCAGGCGCTCAGTGAGGGAAAGGAAACTGAGCTaGGGAGAACTTCCTCATTACAGAAACCAAGCAAGAGAGAGAGAG +
Preference number: 5 (lower is better)
Translates to: LTSCFRRSVRERKLS*GELPHYRNQARERE
Trigger: CTCTCTCTCTCTTGCTTGGTTTCTGTAATGAGGAAGTTCTCCGCAGCTCAGTTTCCTTTCCCTCACTGAGCGCCTGAAACAGGAAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS CCA 90 bp CAGAGAATCAGAACAGTGAAGATTCTAGATGGCTGTCTTCATTCCTaGGCCCCAGCTAGGCAAGATCAGCTTGGATTTGTAAGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: QRIRTVKILDGCLHS*APARQDQLGFVRRP
Trigger: GGGCCTCCTTACAAATCCAAGCTGATCTTGCCTAGCTGGGGCCCAGGAATGAAGACAGCCATCTAGAATCTTCACTGTTCTGATTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493632.5
ENST00000628814.2
CDS-3UTR CAA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCGCAACCTGCCGCCCGTaGCCTCTTGGTGGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: MLKKQHKERHHPSILLITATCRP*PLGGLG
Trigger: GCCGAGGCCACCAAGAGGCAACGGGCGGCAGGTTGC...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGGTCAGTTGGCTGAGCTaGGACACCATGTTGATGGGA +
Preference number: 5 (lower is better)
Translates to: WRIGADFLLLPTKELRSQVSWLS*DTMLMG
Trigger: TCCCATCAACATGGTGTCCAAGCTCAGCCAACTGAC...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CACTGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAACAGGCTTGTCAGTaGGCTGAGCTTGGACACCAT +
Preference number: 5 (lower is better)
Translates to: HWRIGADFLLLPTKELRSQQACQ*AELGHH
Trigger: ATGGTGTCCAAGCTCAGCCAACTGACAAGCCTGTTG...GCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCACACTGGTGATTTCTaGCAGGGAGTGTTTGAGGAT +
Preference number: 5 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSHTGDF*QGVFED
Trigger: ATCCTCAAACACTCCCTGCAAGAAATCACCAGTGTG...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGACACACTGGTGATTTCTaGCAGGGAGTGTTTGAGGAT +
Preference number: 5 (lower is better)
Translates to: EARPFPENTKPCIGSWAGHTGDF*QGVFED
Trigger: ATCCTCAAACACTCCCTGCAAGAAATCACCAGTGTG...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGACACACTGGTGATTTCTaGCAGGGAGTGTTTGAGGAT +
Preference number: 5 (lower is better)
Translates to: SIMGMWGAFPSAFTHTTGHTGDF*QGVFED
Trigger: ATCCTCAAACACTCCCTGCAAGAAATCACCAGTGTG...TCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCCCATGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCGAAGTCAAGTGGCTGTaGACGAACCCTAAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGEVKWL*TNPKEV
Trigger: AACCTCCTTAGGGTTCGTCAACAGCCACTTGACTTC...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTAAGGGACTCAGCTTCTaGTCGCCCAGGGCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSKGLSF*SPRARN
Trigger: GTTCCTGGCCCTGGGCGACAAGAAGCTGAGTCCCTT...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGAATGTGGGGTGCATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCGCGTACTGCTGCTGCTaGATTTTCTGGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: GMWGAFPSAFTHTTGFSSAYCCC*IFWMMV
Trigger: AACCATCATCCAGAAAATCAAGCAGCAGCAGTACGC...GGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATGCACCCCACATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCGCGTACTGCTGCTGCTaGATTTTCTGGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: GHTEARPFPENTKPCIGSAYCCC*IFWMMV
Trigger: AACCATCATCCAGAAAATCAAGCAGCAGCAGTACGC...GCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCCACCAGGAAGGCAAGTaGTACTTCATCCCTGTCGCT +
Preference number: 5 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPHQEGK*YFIPVA
Trigger: AGCGACAGGGATGAAGTACAACTTGCCTTCCTGGTG...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCTGCAAACTCAATCTGTCCTaGGCTGTCAACAGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: FIGYADFHHGNVGCIPFCKLNLS*AVNSPG
Trigger: CCCGGGACTGTTGACAGCCAAGGACAGATTGAGTTT...GCAGAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCGAGGGTAAAAACTTCTaGGGTGATATGGGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPEGKNF*GDMGGW
Trigger: CCAGCCGCCCATATCACCCAAGAAGTTTTTACCCTC...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTTAATGCTTTCACCCCTCCGAACACACACCGTTTTAAACTGGTGGGTTTGGGCGACCCCGGTTTGCTGTaGAGGGTAAAAACTTCTTGG +
Preference number: 5 (lower is better)
Translates to: LNAFTPPNTHRFKLVGLGDPGLL*RVKTSW
Trigger: CCAAGAAGTTTTTACCCTCAACAGCAAACCGGGGTC...GCCCAAACCCACCAGTTTAAAACGGTGTGTGTTCGGAGGGGTGAAAGCATTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGCTTAAGGCCGAGCCCTaGTCTCACTCCAGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMLKAEP*SHSRRA
Trigger: TGCCCTCCTGGAGTGAGACAAGGGCTCGGCCTTAAG...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTCTTAAGGCCGAGCCCTaGTCTCACTCCAGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSLKAEP*SHSRRA
Trigger: TGCCCTCCTGGAGTGAGACAAGGGCTCGGCCTTAAG...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TTGTTGCCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTGACAGAACAGGCTTCTaGTACCCTAAACAAGCTACC +
Preference number: 5 (lower is better)
Translates to: LLPVWCAFFFQPQHLVLSDRTGF*YPKQAT
Trigger: GGTAGCTTGTTTAGGGTACAAGAAGCCTGTTCTGTC...ACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGGCAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS TCA 90 bp ATGATCAGTTTCCCAGACTCAACGTCGACTTTGAGCTGCATTTTCTaGGGAATCCCCAGAGACTCTGCCTTCACCTCAAAGGTGACTGGA +
Preference number: 5 (lower is better)
Translates to: MISFPDSTSTLSCIF*GIPRDSAFTSKVTG
Trigger: TCCAGTCACCTTTGAGGTGAAGGCAGAGTCTCTGGGGATTCCTCAGAAAATGCAGCTCAAAGTCGACGTTGAGTCTGGGAAACTGATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS GCA 90 bp CCTAAGAAGCTGCCAACATATGGAACTGCGGGCTTGAGGGATGCCTaGAGTTCACATTTGCATACAAATGGCCAAACTGCCGTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: PKKLPTYGTAGLRDA*SSHLHTNGQTAVQK
Trigger: TTTCTGAACGGCAGTTTGGCCATTTGTATGCAAATGTGAACTGCAGGCATCCCTCAAGCCCGCAGTTCCATATGTTGGCAGCTTCTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451407.4
ENST00000630338.2
CDS CCA 90 bp AACTGCGGGCTTGAGGGATGCCTGCAGTTCACATTTGCATACAAATaGCCAAACTGCCGTTCAGAAAACCCATTTCCATTCCCAACAGCA +
Preference number: 5 (lower is better)
Translates to: NCGLEGCLQFTFAYK*PNCRSENPFPFPTA
Trigger: TGCTGTTGGGAATGGAAATGGGTTTTCTGAACGGCAGTTTGGCCATTTGTATGCAAATGTGAACTGCAGGCATCCCTCAAGCCCGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451407.4
ENST00000630338.2
CDS-3UTR CAA 90 bp GAACAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGATGCCTGTCTTCACGTaGTCAGTACAGATGTGGCTG +
Preference number: 5 (lower is better)
Translates to: EQASCTLNKLPRLFSSLRMPVFT*SVQMWL
Trigger: CAGCCACATCTGTACTGACAACGTGAAGACAGGCAT...CCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CACTGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCATGCCTGTCTTCACGTaGTCAGTACAGATGTGGCTG +
Preference number: 5 (lower is better)
Translates to: HWRIGADFLLLPTKELRSMPVFT*SVQMWL
Trigger: CAGCCACATCTGTACTGACAACGTGAAGACAGGCAT...GCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCACAAAACTCAATCTGTCCTaGGCTGTCAACAGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: GHPDMTNVRKALSTALGTKLNLS*AVNSPG
Trigger: CCCGGGACTGTTGACAGCCAAGGACAGATTGAGTTT...TGTGCCAAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCAAACTCAATCTGTCCTaGGCTGTCAACAGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFKLNLS*AVNSPG
Trigger: CCCGGGACTGTTGACAGCCAAGGACAGATTGAGTTT...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCATCGCTGTCAGAGGACTaGATGCTGATGAGGATGTGC +
Preference number: 5 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPSLSED*MLMRMC
Trigger: GCACATCCTCATCAGCATCAAGTCCTCTGACAGCGA...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCTCGCTGTCAGAGGACTaGATGCTGATGAGGATGTGC +
Preference number: 5 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFSLSED*MLMRMC
Trigger: GCACATCCTCATCAGCATCAAGTCCTCTGACAGCGA...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TCTCGAGGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTGGCTCTTCAGGGTCTTaGGCCCACTGGATTCATCAC +
Preference number: 5 (lower is better)
Translates to: SRGHPDMTNVRKALSTALGSSGS*AHWIHH
Trigger: GTGATGAATCCAGTGGGCCAAAGACCCTGAAGAGCC...AAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACCTCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCCAGGACCCCGGTTTGCTGTaGAGGGTAAAAACTTCTTGG +
Preference number: 5 (lower is better)
Translates to: WRIGADFLLLPTKELRSQDPGLL*RVKTSW
Trigger: CCAAGAAGTTTTTACCCTCAACAGCAAACCGGGGTC...CTGGCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCGAGGGAGACCCCGGTTaGCTGTTGAGGGTAAAAACT +
Preference number: 5 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFEGDPG*LLRVKT
Trigger: AGTTTTTACCCTCAACAGCAAACCGGGGTCTCCCTC...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GAAAGCCACAGAGATAGGAAGAAAAGGCTGCACTATTTCAAGAGCCTGGAACCAGAGGGAGACCCCGGTTaGCTGTTGAGGGTAAAAACT +
Preference number: 5 (lower is better)
Translates to: ESHRDRKKRLHYFKSLEPEGDPG*LLRVKT
Trigger: AGTTTTTACCCTCAACAGCAAACCGGGGTCTCCCTC...TGGTTCCAGGCTCTTGAAATAGTGCAGCCTTTTCTTCCTATCTCTGTGGCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TCTGTGGGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGACAGAACAGGCTTCTaGTACCCTAAACAAGCTACC +
Preference number: 5 (lower is better)
Translates to: SVGHTEARPFPENTKPCIDRTGF*YPKQAT
Trigger: GGTAGCTTGTTTAGGGTACAAGAAGCCTGTTCTGTC...TATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGGGTCGCAGCGTACAATaGAAGTGTCCAGTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMGRSVQ*KCPVAA
Trigger: AGCTGCCACTGGACACTTCAATTGTACGCTGCGACC...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS-3UTR CAA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCGACCCCGGTTTGCTGTaGAGGGTAAAAACTTCTTGG +
Preference number: 5 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFDPGLL*RVKTSW
Trigger: CCAAGAAGTTTTTACCCTCAACAGCAAACCGGGGTC...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGACCCAGACTGTTTGTaGCCCGTCTGGTGTGCGTTT +
Preference number: 5 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSDPDCL*PVWCAF
Trigger: AAACGCACACCAGACGGGCAACAAACAGTCTGGGTC...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAGGCTTCTTGTACCCTAAACAAGCTACCCAGACTCTTCAGCTCCTTAAGGCCGGAAAGGCACAATTTATaGGTTACGCAGACTTCCATC +
Preference number: 5 (lower is better)
Translates to: QASCTLNKLPRLFSSLRPERHNL*VTQTSI
Trigger: GATGGAAGTCTGCGTAACCAATAAATTGTGCCTTTC...CGGCCTTAAGGAGCTGAAGAGTCTGGGTAGCTTGTTTAGGGTACAAGAAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GGCCACACAGAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCGAAAGGCACAATTTATaGGTTACGCAGACTTCCATC +
Preference number: 5 (lower is better)
Translates to: GHTEARPFPENTKPCIGSERHNL*VTQTSI
Trigger: GATGGAAGTCTGCGTAACCAATAAATTGTGCCTTTC...GCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTCTGTGTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CCCGTCTGGTGTGCGTTTTTCTTCCAGCCTCAGCACTTGGTGCTAAGTCTCACAAAGCCTTCTCTCTTTTaGGAGTCAGCAAAAACATAT +
Preference number: 5 (lower is better)
Translates to: PVWCAFFFQPQHLVLSLTKPSLF*ESAKTY
Trigger: ATATGTTTTTGCTGACTCCAAAAAGAGAGAAGGCTT...TGTGAGACTTAGCACCAAGTGCTGAGGCTGGAAGAAAAACGCACACCAGACGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGCCTAAGGAGGTTCCATaGAACATGAACGACACCCCC +
Preference number: 5 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMPKEVP*NMNDTP
Trigger: GGGGGTGTCGTTCATGTTCAATGGAACCTCCTTAGG...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CATTCCCTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTCACCAGGAAGGCAAGTaGTACTTCATCCCTGTCGCT +
Preference number: 5 (lower is better)
Translates to: HSLLHSHTPLDLAPYINSHQEGK*YFIPVA
Trigger: AGCGACAGGGATGAAGTACAACTTGCCTTCCTGGTG...AGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAGGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGGAGGGAGACCCCGGTTaGCTGTTGAGGGTAAAAACT +
Preference number: 5 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMEGDPG*LLRVKT
Trigger: AGTTTTTACCCTCAACAGCAAACCGGGGTCTCCCTC...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CAATTTATTGGTTACGCAGACTTCCATCATGGGAATGTGGGGTGCATTCCCTTCGACAGAACAGGCTTCTaGTACCCTAAACAAGCTACC +
Preference number: 5 (lower is better)
Translates to: QFIGYADFHHGNVGCIPFDRTGF*YPKQAT
Trigger: GGTAGCTTGTTTAGGGTACAAGAAGCCTGTTCTGTC...GAAGGGAATGCACCCCACATTCCCATGATGGAAGTCTGCGTAACCAATAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGCTCGGGGATTCTCGTTaGAAAAAGGAACCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMLGDSR*KKEPPW
Trigger: CCAAGGAGGTTCCTTTTTCAAACGAGAATCCCCGAG...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ATTATTATCTATATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAAAGCTTGGACACCATGTaGATGGGATTGGCCTCACCA +
Preference number: 5 (lower is better)
Translates to: IIIYISTLKSALQFLSSESLDTM*MGLASP
Trigger: TGGTGAGGCCAATCCCATCAACATGGTGTCCAAGCT...TTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATAGATAATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ATTATTATCTATATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATCGTGCAGCAAGGCCTaGACCTTGTCTTCAATGGAC +
Preference number: 5 (lower is better)
Translates to: IIIYISTLKSALQFLSSESCSKA*TLSSMD
Trigger: GTCCATTGAAGACAAGGTCAAGGCCTTGCTGCACGA...TTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATAGATAATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp GAAGCTAGGCCCTTTCCTGAAAACACAAAGCCTTGCATAGGAAGCTGGGCAGGAAAGCCTTCTCTCTTTTaGGAGTCAGCAAAAACATAT +
Preference number: 5 (lower is better)
Translates to: EARPFPENTKPCIGSWAGKPSLF*ESAKTY
Trigger: ATATGTTTTTGCTGACTCCAAAAAGAGAGAAGGCTT...TCCTGCCCAGCTTCCTATGCAAGGCTTTGTGTTTTCAGGAAAGGGCCTAGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCATCTTGCAGGGAGTGTTaGAGGATCTCCAGCCACTCC +
Preference number: 5 (lower is better)
Translates to: KQHKERHHPSILLITKEASCREC*RISSHS
Trigger: GGAGTGGCTGGAGATCCTCAAACACTCCCTGCAAGA...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TCTCGAGGTCATCCTGATATGACGAATGTTCGTAAAGCACTTAGCACAGCACTTCACACTGGTGATTTCTaGCAGGGAGTGTTTGAGGAT +
Preference number: 5 (lower is better)
Translates to: SRGHPDMTNVRKALSTALHTGDF*QGVFED
Trigger: ATCCTCAAACACTCCCTGCAAGAAATCACCAGTGTG...AAGTGCTGTGCTAAGTGCTTTACGAACATTCGTCATATCAGGATGACCTCGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CACTGGAGAATAGGAGCTGATTTCCTGCTCCTTCCAACCAAAGAACTGAGAAGCGAAAGGCACAATTTATaGGTTACGCAGACTTCCATC +
Preference number: 5 (lower is better)
Translates to: HWRIGADFLLLPTKELRSERHNL*VTQTSI
Trigger: GATGGAAGTCTGCGTAACCAATAAATTGTGCCTTTC...GCTTCTCAGTTCTTTGGTTGGAAGGAGCAGGAAATCAGCTCCTATTCTCCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ATTATTATCTATATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAATGTTCCCCAGTGTGTTaGCAATGCCTGTCTTCACGT +
Preference number: 5 (lower is better)
Translates to: IIIYISTLKSALQFLSSECSPVC*QCLSSR
Trigger: ACGTGAAGACAGGCATTGCAAACACACTGGGGAACA...TTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATAGATAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCAGAGGGTAAAAACTTCTaGGGTGATATGGGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: KQHKERHHPSILLITKEAEGKNF*GDMGGW
Trigger: CCAGCCGCCCATATCACCCAAGAAGTTTTTACCCTC...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ATTATTATCTATATCTCCACCCTCAAATCGGCGCTGCAGTTCCTTTCTTCAGAAGACCCCGGTTTGCTGTaGAGGGTAAAAACTTCTTGG +
Preference number: 5 (lower is better)
Translates to: IIIYISTLKSALQFLSSEDPGLL*RVKTSW
Trigger: CCAAGAAGTTTTTACCCTCAACAGCAAACCGGGGTC...TTCTGAAGAAAGGAACTGCAGCGCCGATTTGAGGGTGGAGATATAGATAATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCTCCTTCCGCGGCATTTaGGGGGATTCCTGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: MLKKQHKERHHPSILLITSFRGI*GDSWSF
Trigger: GAAGGACCAGGAATCCCCCAAAATGCCGCGGAAGGA...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CTTCTGCATTCACACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGGACAGAACAGGCTTCTaGTACCCTAAACAAGCTACC +
Preference number: 5 (lower is better)
Translates to: LLHSHTPLDLAPYINSAMDRTGF*YPKQAT
Trigger: GGTAGCTTGTTTAGGGTACAAGAAGCCTGTTCTGTC...CATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTGTGAATGCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp TTAGCTAAAGCAGCTTGTGTCACTGAAGCTGGACAGAACAGGCTTCTTGTACCCAAGCCTTCTCTCTTTTaGGAGTCAGCAAAAACATAT +
Preference number: 5 (lower is better)
Translates to: LAKAACVTEAGQNRLLVPKPSLF*ESAKTY
Trigger: ATATGTTTTTGCTGACTCCAAAAAGAGAGAAGGCTT...GGGTACAAGAAGCCTGTTCTGTCCAGCTTCAGTGACACAAGCTGCTTTAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCAATGCCTGTCTTCACGTaGTCAGTACAGATGTGGCTG +
Preference number: 5 (lower is better)
Translates to: KQHKERHHPSILLITKEAMPVFT*SVQMWL
Trigger: CAGCCACATCTGTACTGACAACGTGAAGACAGGCAT...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCATGTTCCCCAGTGTGTTaGCAATGCCTGTCTTCACGT +
Preference number: 5 (lower is better)
Translates to: KQHKERHHPSILLITKEACSPVC*QCLSSR
Trigger: ACGTGAAGACAGGCATTGCAAACACACTGGGGAACA...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCAGAAGTCAAGTGGCTGTaGACGAACCCTAAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: KQHKERHHPSILLITKEAEVKWL*TNPKEV
Trigger: AACCTCCTTAGGGTTCGTCAACAGCCACTTGACTTC...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp AAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCAAGGAAGCACACTTAGCACAGCACTaGGCACATCATGAGTGTTCG +
Preference number: 5 (lower is better)
Translates to: KQHKERHHPSILLITKEAHLAQH*AHHECS
Trigger: CGAACACTCATGATGTGCCAAGTGCTGTGCTAAGTG...TGCTTCCTTGGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp CACACACCACTGGATTTAGCTCCCTACATTAATTCTGCTATGTTGAAAAAGCAAGCGTACTGCTGCTGCTaGATTTTCTGGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: HTPLDLAPYINSAMLKKQAYCCC*IFWMMV
Trigger: AACCATCATCCAGAAAATCAAGCAGCAGCAGTACGC...TTGCTTTTTCAACATAGCAGAATTAATGTAGGGAGCTAAATCCAGTGGTGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCGACCCCGGTTTGCTGTaGAGGGTAAAAACTTCTTGG +
Preference number: 5 (lower is better)
Translates to: MLKKQHKERHHPSILLITDPGLL*RVKTSW
Trigger: CCAAGAAGTTTTTACCCTCAACAGCAAACCGGGGTC...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS-3UTR CAA 90 bp ATGTTGAAAAAGCAACATAAGGAAAGACATCACCCATCTATTCTCCTAATAACCGAAAGGCACAATTTATaGGTTACGCAGACTTCCATC +
Preference number: 5 (lower is better)
Translates to: MLKKQHKERHHPSILLITERHNL*VTQTSI
Trigger: GATGGAAGTCTGCGTAACCAATAAATTGTGCCTTTC...GGTTATTAGGAGAATAGATGGGTGATGTCTTTCCTTATGTTGCTTTTTCAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS TCA 72 bp CTTGTCCCCGCCGGCCGCCCTGCCCTCGGCAGAGGATaGGCACGTGAAGGAGCGCAGCCGGGGCGCGGGCAC +
Preference number: 6 (lower is better)
Translates to: LVPAGRPALGRG*AREGAQPGRGH
Trigger: GTGCCCGCGCCCCGGCTGCGCTCCTTCACGTGCTCATCCTCTGCCGAGGGCAGGGCGGCCGGCGGGGACAAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CAA 72 bp CACGTGAAGGAGCGCAGCCGGGGCGCGGGCACCTGCTaGCCGGGCCCCTCGCCGCGATCAGCCTCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: HVKERSRGAGTC*PGPSPRSASWA
Trigger: AGCCCAGGAGGCTGATCGCGGCGAGGGGCCCGGCAAGCAGGTGCCCGCGCCCCGGCTGCGCTCCTTCACGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CCA 72 bp TGTTGCCATGGTTCCAGCAGGGGACCATGGTGGGCGTaGGCCTCCTCGGCCGGGCCGGCAGGCACCCCCAGG +
Preference number: 6 (lower is better)
Translates to: CCHGSSRGPWWA*ASSAGPAGTPR
Trigger: CCTGGGGGTGCCTGCCGGCCCGGCCGAGGAGGCCCACGCCCACCATGGTCCCCTGCTGGAACCATGGCAACA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000629761.2
ENST00000630338.2
ENST00000630854.3
CDS GCA 72 bp CCCACACACCACCGAGGGGAGCGGAGGCCCCTCCACTaGAACCTGCCGCCCGTTGCCTCTTGGTGGCCTCGG +
Preference number: 6 (lower is better)
Translates to: PTHHRGERRPLH*NLPPVASWWPR
Trigger: CCGAGGCCACCAAGAGGCAACGGGCGGCAGGTTGCAGTGGAGGGGCCTCCGCTCCCCTCGGTGGTGTGTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS CAA 72 bp GGGAGCGGAGGCCCCTCCACTGCAACCTGCCGCCCGTaGCCTCTTGGTGGCCTCGGCTGCTGCCACCAGCTT +
Preference number: 6 (lower is better)
Translates to: GSGGPSTATCRP*PLGGLGCCHQL
Trigger: AAGCTGGTGGCAGCAGCCGAGGCCACCAAGAGGCAACGGGCGGCAGGTTGCAGTGGAGGGGCCTCCGCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS CAA 72 bp TGGGAGCTGACCGGGGTCTTGGGCTTCCCTTGGCTCTaGTCCCCGCCGGCCGCCCTGCCCTCGGCAGAGGAT +
Preference number: 6 (lower is better)
Translates to: WELTGVLGFPWL*SPPAALPSAED
Trigger: ATCCTCTGCCGAGGGCAGGGCGGCCGGCGGGGACAAGAGCCAAGGGAAGCCCAAGACCCCGGTCAGCTCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CAA 90 bp GGCACCTGCTTGCCGGGCCCCTCGCCGCGATCAGCCTCCTGGGCTTaGGTGAGCACGATGCTGGGCGACAAGATGCCGGGTTCCGGGCAG +
Preference number: 6 (lower is better)
Translates to: GTCLPGPSPRSASWA*VSTMLGDKMPGSGQ
Trigger: CTGCCCGGAACCCGGCATCTTGTCGCCCAGCATCGTGCTCACCAAAGCCCAGGAGGCTGATCGCGGCGAGGGGCCCGGCAAGCAGGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS TCA 72 bp CGGGCCCCTCGCCGCGATCAGCCTCCTGGGCTTTGGTaGGCACGATGCTGGGCGACAAGATGCCGGGTTCCG +
Preference number: 6 (lower is better)
Translates to: RAPRRDQPPGLW*ARCWATRCRVP
Trigger: CGGAACCCGGCATCTTGTCGCCCAGCATCGTGCTCACCAAAGCCCAGGAGGCTGATCGCGGCGAGGGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS GCA 72 bp GGAGCGGAGGCCCCTCCACTGCAACCTGCCGCCCGTTaGCTCTTGGTGGCCTCGGCTGCTGCCACCAGCTTA +
Preference number: 6 (lower is better)
Translates to: GAEAPPLQPAAR*LLVASAAATSL
Trigger: TAAGCTGGTGGCAGCAGCCGAGGCCACCAAGAGGCAACGGGCGGCAGGTTGCAGTGGAGGGGCCTCCGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS GCA 72 bp CTAGAGGCCCTGGTGGCCCCTCCTCCGGCCGGTGCTTaGCGTGATGCGGGAGCTCGGTGTTGTCGCGGTAGT +
Preference number: 6 (lower is better)
Translates to: LEALVAPPPAGA*RDAGARCCRGS
Trigger: ACTACCGCGACAACACCGAGCTCCCGCATCACGGCAAGCACCGGCCGGAGGAGGGGCCACCAGGGCCTCTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CCA 72 bp GAAGGCTTGATGGGCCTCTTGGCCGGCACCGGGGCCTaGGAGCTGACCGGGGTCTTGGGCTTCCCTTGGCTC +
Preference number: 6 (lower is better)
Translates to: EGLMGLLAGTGA*ELTGVLGFPWL
Trigger: GAGCCAAGGGAAGCCCAAGACCCCGGTCAGCTCCCAGGCCCCGGTGCCGGCCAAGAGGCCCATCAAGCCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CCA 72 bp GCACGCAGAGCGCGTATGCCCGGGAGATGGACTCGCTaGCACGCACGAGGAAGCTCCCGTCCTTGCCTGTCC +
Preference number: 6 (lower is better)
Translates to: ARRARMPGRWTR*HARGSSRPCLS
Trigger: GGACAGGCAAGGACGGGAGCTTCCTCGTGCGTGCCAGCGAGTCCATCTCCCGGGCATACGCGCTCTGCGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000629761.2
ENST00000630338.2
ENST00000630854.3
CDS CCA 72 bp TGCACACGAACCCACGTGTGGCGCAGCGCACCTGCATaGCAGTCCTGCCTAGAGGCCCTGGTGGCCCCTCCT +
Preference number: 6 (lower is better)
Translates to: CTRTHVWRSAPA*QSCLEALVAPP
Trigger: AGGAGGGGCCACCAGGGCCTCTAGGCAGGACTGCCATGCAGGTGCGCTGCGCCACACGTGGGTTCGTGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS GCA 72 bp CAAATGCACACGAACCCACGTGTGGCGCAGCGCACCTaGATGGCAGTCCTGCCTAGAGGCCCTGGTGGCCCC +
Preference number: 6 (lower is better)
Translates to: QMHTNPRVAQRT*MAVLPRGPGGP
Trigger: GGGGCCACCAGGGCCTCTAGGCAGGACTGCCATGCAGGTGCGCTGCGCCACACGTGGGTTCGTGTGCATTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS CCA 72 bp AGCAGCTCCTCCGCCTTGGAGCGGGTGATGTTGCCATaGTTCCAGCAGGGGACCATGGTGGGCGTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: SSSSALERVMLP*FQQGTMVGVGL
Trigger: GAGGCCCACGCCCACCATGGTCCCCTGCTGGAACCATGGCAACATCACCCGCTCCAAGGCGGAGGAGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000629761.2
ENST00000630338.2
ENST00000630854.3
CDS CAA 72 bp GAGGCCCCTCCACTGCAACCTGCCGCCCGTTGCCTCTaGGTGGCCTCGGCTGCTGCCACCAGCTTAACTGAC +
Preference number: 6 (lower is better)
Translates to: EAPPLQPAARCL*VASAAATSLTD
Trigger: GTCAGTTAAGCTGGTGGCAGCAGCCGAGGCCACCAAGAGGCAACGGGCGGCAGGTTGCAGTGGAGGGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS CAA 72 bp GGCGGGGTCTGCTGGTTGATTTCCGATCTGGAAGGCTaGATGGGCCTCTTGGCCGGCACCGGGGCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: GGVCWLISDLEG*MGLLAGTGAWE
Trigger: CTCCCAGGCCCCGGTGCCGGCCAAGAGGCCCATCAAGCCTTCCAGATCGGAAATCAACCAGCAGACCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CAA 72 bp GGTTCCGGGCAGGGCGGGGGTTCCTTCCGCGGCATTTaGGGGGATTCCTGGTCCTTCCTGGGAGCAGGCTTA +
Preference number: 6 (lower is better)
Translates to: GSGQGGGSFRGI*GDSWSFLGAGL
Trigger: TAAGCCTGCTCCCAGGAAGGACCAGGAATCCCCCAAAATGCCGCGGAAGGAACCCCCGCCCTGCCCGGAACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CAA 72 bp TGGTTGATTTCCGATCTGGAAGGCTTGATGGGCCTCTaGGCCGGCACCGGGGCCTGGGAGCTGACCGGGGTC +
Preference number: 6 (lower is better)
Translates to: WLISDLEGLMGL*AGTGAWELTGV
Trigger: GACCCCGGTCAGCTCCCAGGCCCCGGTGCCGGCCAAGAGGCCCATCAAGCCTTCCAGATCGGAAATCAACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CAA 90 bp TTGCCTGTCCTGGAAAGCAGCTCCTCCGCCTTGGAGCGGGTGATGTaGCCATGGTTCCAGCAGGGGACCATGGTGGGCGTGGGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: LPVLESSSSALERVM*PWFQQGTMVGVGLL
Trigger: GAGGAGGCCCACGCCCACCATGGTCCCCTGCTGGAACCATGGCAACATCACCCGCTCCAAGGCGGAGGAGCTGCTTTCCAGGACAGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000629761.2
ENST00000630338.2
ENST00000630854.3
CDS GCA 72 bp CCACTGCACGGAGGGGCCCTGCTAGTGACTTCCCACTaGTTCATGGGGTCGTGGCTGGTGAGGCTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: PLHGGALLVTSH*FMGSWLVRLFR
Trigger: CCTGAAGAGCCTCACCAGCCACGACCCCATGAAGCAGTGGGAAGTCACTAGCAGGGCCCCTCCGTGCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS CAA 72 bp CTGGAAAGCAGCTCCTCCGCCTTGGAGCGGGTGATGTaGCCATGGTTCCAGCAGGGGACCATGGTGGGCGTG +
Preference number: 6 (lower is better)
Translates to: LESSSSALERVM*PWFQQGTMVGV
Trigger: CACGCCCACCATGGTCCCCTGCTGGAACCATGGCAACATCACCCGCTCCAAGGCGGAGGAGCTGCTTTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000629761.2
ENST00000630338.2
ENST00000630854.3
CDS CAA 90 bp CGGAGAGGCTCGGCCGGCTGGTCTCGGTCGCTCGGGGATTCTCGTTaGAAAAAGGAACCTCCTTGGCCTCACAGGAGCTGGCAGTCAGCG +
Preference number: 6 (lower is better)
Translates to: RRGSAGWSRSLGDSR*KKEPPWPHRSWQSA
Trigger: CGCTGACTGCCAGCTCCTGTGAGGCCAAGGAGGTTCCTTTTTCAAACGAGAATCCCCGAGCGACCGAGACCAGCCGGCCGAGCCTCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000474278.2
ENST00000496402.2
ENST00000629761.2
ENST00000630338.2
ENST00000630466.1
ENST00000630854.3
ENST00000631055.1
CDS CAA 90 bp AAGATGCCGGGTTCCGGGCAGGGCGGGGGTTCCTTCCGCGGCATTTaGGGGGATTCCTGGTCCTTCCTGGGAGCAGGCTTAGGGAAGGAA +
Preference number: 6 (lower is better)
Translates to: KMPGSGQGGGSFRGI*GDSWSFLGAGLGKE
Trigger: TTCCTTCCCTAAGCCTGCTCCCAGGAAGGACCAGGAATCCCCCAAAATGCCGCGGAAGGAACCCCCGCCCTGCCCGGAACCCGGCATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS TCA 72 bp CTGTCCTGGAAAGCAGCTCCTCCGCCTTGGAGCGGGTaGTGTTGCCATGGTTCCAGCAGGGGACCATGGTGG +
Preference number: 6 (lower is better)
Translates to: LSWKAAPPPWSG*CCHGSSRGPWW
Trigger: CCACCATGGTCCCCTGCTGGAACCATGGCAACATCACCCGCTCCAAGGCGGAGGAGCTGCTTTCCAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000629761.2
ENST00000630338.2
ENST00000630854.3
CDS TCA 72 bp CCCCCTGGAAGTGGCCTGTCAACTCCCCATGGTGGGTaGGAGGCGTGTAGATGGGCAGCTGCGTTTCTGTGG +
Preference number: 6 (lower is better)
Translates to: PPGSGLSTPHGG*EACRWAAAFLW
Trigger: CCACAGAAACGCAGCTGCCCATCTACACGCCTCTCACCCACCATGGGGAGTTGACAGGCCACTTCCAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS GCA 72 bp ACTGGTTCCCCCTCCACTGTGGCAGGAAGTCACTCCTaGCATAGGTGTGGGGCGAGGAGCATAGCAGGTGGG +
Preference number: 6 (lower is better)
Translates to: TGSPSTVAGSHS*HRCGARSIAGG
Trigger: CCCACCTGCTATGCTCCTCGCCCCACACCTATGGCAGGAGTGACTTCCTGCCACAGTGGAGGGGGAACCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493632.5
ENST00000628814.2
CDS CCA 72 bp AAGCATGGCCTAGCAGGCATGGGTGGGCCAGAGAAGTaGTTCTTCTGCGGCCGTGCTGACACCCACGTGGGA +
Preference number: 6 (lower is better)
Translates to: KHGLAGMGGPEK*FFCGRADTHVG
Trigger: TCCCACGTGGGTGTCAGCACGGCCGCAGAAGAACCACTTCTCTGGCCCACCCATGCCTGCTAGGCCATGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS CAA 72 bp GGCTCCCACCCCCAACCCATGCGTACCTGCTTGCTGTaGCCCAGTGAACACACAATGGGCAGTGCTCCCCTC +
Preference number: 6 (lower is better)
Translates to: GSHPQPMRTCLL*PSEHTMGSAPL
Trigger: GAGGGGAGCACTGCCCATTGTGTGTTCACTGGGCAACAGCAAGCAGGTACGCATGGGTTGGGGGTGGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451407.4
ENST00000630338.2
CDS TCA 72 bp AGTGTCCAGTGGCAGCTGAAGTCCCCCTGGGTGGAATaGCCGGCTCTGGAGACGTCAGGAGAGTTGTGGCCA +
Preference number: 6 (lower is better)
Translates to: SVQWQLKSPWVE*PALETSGELWP
Trigger: TGGCCACAACTCTCCTGACGTCTCCAGAGCCGGTCATTCCACCCAGGGGGACTTCAGCTGCCACTGGACACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS GCA 72 bp GCTCCCACCCCCAACCCATGCGTACCTGCTTGCTGTTaGCCAGTGAACACACAATGGGCAGTGCTCCCCTCT +
Preference number: 6 (lower is better)
Translates to: APTPNPCVPACC*PVNTQWAVLPS
Trigger: AGAGGGGAGCACTGCCCATTGTGTGTTCACTGGGCAACAGCAAGCAGGTACGCATGGGTTGGGGGTGGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451407.4
ENST00000630338.2
CDS GCA 72 bp GCTGAGGCTCCCACCCCCAACCCATGCGTACCTGCTTaGTGTTGCCCAGTGAACACACAATGGGCAGTGCTC +
Preference number: 6 (lower is better)
Translates to: AEAPTPNPCVPA*CCPVNTQWAVL
Trigger: GAGCACTGCCCATTGTGTGTTCACTGGGCAACAGCAAGCAGGTACGCATGGGTTGGGGGTGGGAGCCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000451407.4
ENST00000630338.2
CDS CCA 72 bp GGCAGTCAGCGGGATGTTTCTTGGGGGCAGCTCGGGTaGAGACACGACACTTTCTGTGTCCTCCTCAGGGTC +
Preference number: 6 (lower is better)
Translates to: GSQRDVSWGQLG*RHDTFCVLLRV
Trigger: GACCCTGAGGAGGACACAGAAAGTGTCGTGTCTCCACCCGAGCTGCCCCCAAGAAACATCCCGCTGACTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000467393.5
ENST00000474278.2
ENST00000627806.2
ENST00000629761.2
ENST00000630466.1
CDS CCA 72 bp GGCCTCACAGGAGCTGGCAGTCAGCGGGATGTTTCTTaGGGGCAGCTCGGGTGGAGACACGACACTTTCTGT +
Preference number: 6 (lower is better)
Translates to: GLTGAGSQRDVS*GQLGWRHDTFC
Trigger: ACAGAAAGTGTCGTGTCTCCACCCGAGCTGCCCCCAAGAAACATCCCGCTGACTGCCAGCTCCTGTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000474278.2
ENST00000629761.2
ENST00000630466.1
CDS CCA 72 bp TCTGGAAGCCCACTGGTGTCCATGCTTTGCAGTCGCTaGAACAATGTCTCGGAGAGGCTCGGCCGGCTGGTC +
Preference number: 6 (lower is better)
Translates to: SGSPLVSMLCSR*NNVSERLGRLV
Trigger: GACCAGCCGGCCGAGCCTCTCCGAGACATTGTTCCAGCGACTGCAAAGCATGGACACCAGTGGGCTTCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000474278.2
ENST00000496402.2
ENST00000629761.2
ENST00000630338.2
ENST00000630466.1
ENST00000630854.3
ENST00000631055.1
CDS CCA 72 bp GCCCTGCTAGTGACTTCCCACTGCTTCATGGGGTCGTaGCTGGTGAGGCTCTTCAGGGTCTTTGGCCCACTG +
Preference number: 6 (lower is better)
Translates to: ALLVTSHCFMGS*LVRLFRVFGPL
Trigger: CAGTGGGCCAAAGACCCTGAAGAGCCTCACCAGCCACGACCCCATGAAGCAGTGGGAAGTCACTAGCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CCA 72 bp GGCCTCACAGGAGCTGGCAGTCAGCGGGATGTTTCTTaGGGGCAGCTCGGGTGGAGACACGACACTTTCTAC +
Preference number: 6 (lower is better)
Translates to: GLTGAGSQRDVS*GQLGWRHDTFY
Trigger: GTAGAAAGTGTCGTGTCTCCACCCGAGCTGCCCCCAAGAAACATCCCGCTGACTGCCAGCTCCTGTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000445964.6
ENST00000451407.4
ENST00000496402.2
ENST00000630338.2
ENST00000630854.3
ENST00000631055.1
CDS CAA 72 bp TGGCCTCACAGGAGCTGGCAGTCAGCGGGATGTTTCTaGGGGGCAGCTCGGGTGGAGACACGACACTTTCTG +
Preference number: 6 (lower is better)
Translates to: WPHRSWQSAGCF*GAARVETRHFL
Trigger: CAGAAAGTGTCGTGTCTCCACCCGAGCTGCCCCCAAGAAACATCCCGCTGACTGCCAGCTCCTGTGAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000474278.2
ENST00000629761.2
ENST00000630466.1
CDS CAA 90 bp GAACCTCCTTGGCCTCACAGGAGCTGGCAGTCAGCGGGATGTTTCTaGGGGGCAGCTCGGGTGGAGACACGACACTTTCTGTGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: EPPWPHRSWQSAGCF*GAARVETRHFLCPP
Trigger: AGGAGGACACAGAAAGTGTCGTGTCTCCACCCGAGCTGCCCCCAAGAAACATCCCGCTGACTGCCAGCTCCTGTGAGGCCAAGGAGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000474278.2
ENST00000629761.2
ENST00000630466.1
CDS CAA 90 bp TGGGCCTTGACTCCTGTGTCCTGGGAGGGAGACCCCGGTTTGCTGTaGAGGGTAAAAACTTCTTGGGTGATATGGGCGGCTGGCCGGGAG +
Preference number: 6 (lower is better)
Translates to: WALTPVSWEGDPGLL*RVKTSWVIWAAGRE
Trigger: CTCCCGGCCAGCCGCCCATATCACCCAAGAAGTTTTTACCCTCAACAGCAAACCGGGGTCTCCCTCCCAGGACACAGGAGTCAAGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS TCA 72 bp GCTTCTCCCTCGTCTTGCCCTGAGAGGTCTGCAGCTTaGTCTCCCCCTGGAAGTGGCCTGTCAACTCCCCAT +
Preference number: 6 (lower is better)
Translates to: ASPSSCPERSAA*SPPGSGLSTPH
Trigger: ATGGGGAGTTGACAGGCCACTTCCAGGGGGAGATCAAGCTGCAGACCTCTCAGGGCAAGACGAGGGAGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS TCA 72 bp CCCCCAACCCATGCGTACCTGCTTGCTGTTGCCCAGTaGACACACAATGGGCAGTGCTCCCCTCTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: PPTHAYLLAVAQ*THNGQCSPLPP
Trigger: AGGAGGAAGAGGGGAGCACTGCCCATTGTGTGTTCACTGGGCAACAGCAAGCAGGTACGCATGGGTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451407.4
ENST00000630338.2
CDS GCA 72 bp GTAAACGCAATTCCGATACAGCACGCAGAGCGCGTATaGCCGGGAGATGGACTCGCTGGCACGCACGAGGAA +
Preference number: 6 (lower is better)
Translates to: VNAIPIQHAERV*PGDGLAGTHEE
Trigger: TTCCTCGTGCGTGCCAGCGAGTCCATCTCCCGGGCATACGCGCTCTGCGTGCTGTATCGGAATTGCGTTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000629761.2
ENST00000630338.2
ENST00000630854.3
CDS GCA 72 bp ATAAGGGAGGGCCGGTGCGGAGACTCAGGACCCTCGTaGAGCAAGGCCTTGACCTTGTCTTCAATGGACGAC +
Preference number: 6 (lower is better)
Translates to: IREGRCGDSGPS*SKALTLSSMDD
Trigger: GTCGTCCATTGAAGACAAGGTCAAGGCCTTGCTGCACGAGGGTCCTGAGTCTCCGCACCGGCCCTCCCTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS CCA 72 bp GTCGCTGGAACAATGTCTCGGAGAGGCTCGGCCGGCTaGTCTCGGTCGCTCGGGGATTCTCGTTTGAAAAAG +
Preference number: 6 (lower is better)
Translates to: VAGTMSRRGSAG*SRSLGDSRLKK
Trigger: CTTTTTCAAACGAGAATCCCCGAGCGACCGAGACCAGCCGGCCGAGCCTCTCCGAGACATTGTTCCAGCGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000474278.2
ENST00000496402.2
ENST00000629761.2
ENST00000630338.2
ENST00000630466.1
ENST00000630854.3
ENST00000631055.1
CDS CCA 72 bp GGAGACCCCGGTTTGCTGTTGAGGGTAAAAACTTCTTaGGTGATATGGGCGGCTGGCCGGGAGGTGTCGGAG +
Preference number: 6 (lower is better)
Translates to: GDPGLLLRVKTS*VIWAAGREVSE
Trigger: CTCCGACACCTCCCGGCCAGCCGCCCATATCACCCAAGAAGTTTTTACCCTCAACAGCAAACCGGGGTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS CCA 72 bp GGCAGTCAGCGGGATGTTTCTTGGGGGCAGCTCGGGTaGAGACACGACACTTTCTACTGTGTCCTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: GSQRDVSWGQLG*RHDTFYCVLLR
Trigger: CCTGAGGAGGACACAGTAGAAAGTGTCGTGTCTCCACCCGAGCTGCCCCCAAGAAACATCCCGCTGACTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000445964.6
ENST00000451407.4
ENST00000496402.2
ENST00000630338.2
ENST00000630854.3
ENST00000631055.1
CDS CAA 72 bp GGGAGACCCCGGTTTGCTGTTGAGGGTAAAAACTTCTaGGGTGATATGGGCGGCTGGCCGGGAGGTGTCGGA +
Preference number: 6 (lower is better)
Translates to: GRPRFAVEGKNF*GDMGGWPGGVG
Trigger: TCCGACACCTCCCGGCCAGCCGCCCATATCACCCAAGAAGTTTTTACCCTCAACAGCAAACCGGGGTCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS CAA 72 bp TGGCCTCACAGGAGCTGGCAGTCAGCGGGATGTTTCTaGGGGGCAGCTCGGGTGGAGACACGACACTTTCTA +
Preference number: 6 (lower is better)
Translates to: WPHRSWQSAGCF*GAARVETRHFL
Trigger: TAGAAAGTGTCGTGTCTCCACCCGAGCTGCCCCCAAGAAACATCCCGCTGACTGCCAGCTCCTGTGAGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000445964.6
ENST00000451407.4
ENST00000496402.2
ENST00000630338.2
ENST00000630854.3
ENST00000631055.1
CDS CAA 90 bp GTCCTGGGAGGGAGACCCCGGTTTGCTGTTGAGGGTAAAAACTTCTaGGGTGATATGGGCGGCTGGCCGGGAGGTGTCGGAGGACTTTCT +
Preference number: 6 (lower is better)
Translates to: VLGGRPRFAVEGKNF*GDMGGWPGGVGGLS
Trigger: AGAAAGTCCTCCGACACCTCCCGGCCAGCCGCCCATATCACCCAAGAAGTTTTTACCCTCAACAGCAAACCGGGGTCTCCCTCCCAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS CAA 90 bp GGTCACTGGGCCTTGACTCCTGTGTCCTGGGAGGGAGACCCCGGTTaGCTGTTGAGGGTAAAAACTTCTTGGGTGATATGGGCGGCTGGC +
Preference number: 6 (lower is better)
Translates to: GHWALTPVSWEGDPG*LLRVKTSWVIWAAG
Trigger: GCCAGCCGCCCATATCACCCAAGAAGTTTTTACCCTCAACAGCAAACCGGGGTCTCCCTCCCAGGACACAGGAGTCAAGGCCCAGTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CAA 90 bp GAACCTCCTTGGCCTCACAGGAGCTGGCAGTCAGCGGGATGTTTCTaGGGGGCAGCTCGGGTGGAGACACGACACTTTCTACTGTGTCCT +
Preference number: 6 (lower is better)
Translates to: EPPWPHRSWQSAGCF*GAARVETRHFLLCP
Trigger: AGGACACAGTAGAAAGTGTCGTGTCTCCACCCGAGCTGCCCCCAAGAAACATCCCGCTGACTGCCAGCTCCTGTGAGGCCAAGGAGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000445964.6
ENST00000451407.4
ENST00000496402.2
ENST00000630338.2
ENST00000630854.3
ENST00000631055.1
CDS CAA 90 bp CTTCACTTGACTCCTGTGTCCTGGGAGGGAGACCCCGGTTTGCTGTaGAGGGTAAAAACTTCTTGGGTGATATGGGCGGCTGGCCGGGAG +
Preference number: 6 (lower is better)
Translates to: LHLTPVSWEGDPGLL*RVKTSWVIWAAGRE
Trigger: CTCCCGGCCAGCCGCCCATATCACCCAAGAAGTTTTTACCCTCAACAGCAAACCGGGGTCTCCCTCCCAGGACACAGGAGTCAAGTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417661.1
ENST00000628842.1
CDS TCA 72 bp TGGTCGCAGCGTACAATTGAAGTGTCCAGTGGCAGCTaGAGTCCCCCTGGGTGGAATGACCGGCTCTGGAGA +
Preference number: 6 (lower is better)
Translates to: WSQRTIEVSSGS*SPPGWNDRLWR
Trigger: TCTCCAGAGCCGGTCATTCCACCCAGGGGGACTTCAGCTGCCACTGGACACTTCAATTGTACGCTGCGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS TCA 72 bp CCTCTTGGTGGCCTCGGCTGCTGCCACCAGCTTAACTaGCTGACTTCCTGTTTCAGGCGCTCAGTGAGGGAA +
Preference number: 6 (lower is better)
Translates to: PLGGLGCCHQLN*LTSCFRRSVRE
Trigger: TTCCCTCACTGAGCGCCTGAAACAGGAAGTCAGTCAGTTAAGCTGGTGGCAGCAGCCGAGGCCACCAAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS GCA 72 bp CCAGCCACTCCTTCTCACTCAGGGGGTCCTCTTGGGTaGCGATCACGTAAATGTCATGGGGGATGTAGTCCG +
Preference number: 6 (lower is better)
Translates to: PATPSHSGGPLG*RSRKCHGGCSP
Trigger: CGGACTACATCCCCCATGACATTTACGTGATCGGCACCCAAGAGGACCCCCTGAGTGAGAAGGAGTGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000493078.1
ENST00000627169.2
ENST00000628466.1
ENST00000629761.2
ENST00000630854.3
CDS GCA 72 bp CGCCCCCGTGGGCCAGCCATTACCCATAGAGCTCCTTaGAGAGCAGTGTGGTCAGTTTCTTCAGGTGAGGAA +
Preference number: 6 (lower is better)
Translates to: RPRGPAITHRAP*RAVWSVSSGEE
Trigger: TTCCTCACCTGAAGAAACTGACCACACTGCTCTGCAAGGAGCTCTATGGGTAATGGCTGGCCCACGGGGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496402.2
ENST00000631055.1
CDS CCA 72 bp CGTTTGAAAAAGGAACCTCCTTGGCCTCACAGGAGCTaGCAGTCAGCGGGATGTTTCTTGGGGGCAGCTCGG +
Preference number: 6 (lower is better)
Translates to: RLKKEPPWPHRS*QSAGCFLGAAR
Trigger: CCGAGCTGCCCCCAAGAAACATCCCGCTGACTGCCAGCTCCTGTGAGGCCAAGGAGGTTCCTTTTTCAAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000474278.2
ENST00000496402.2
ENST00000629761.2
ENST00000630338.2
ENST00000630466.1
ENST00000630854.3
ENST00000631055.1
CDS CCA 72 bp ACCTTCTGCTCCCTCCTCTCTGTGAGCAGCTGGTCGTaGGACAGGAGGTCTGCGTACTGCTGCTGCTTGATT +
Preference number: 6 (lower is better)
Translates to: TFCSLLSVSSWS*DRRSAYCCCLI
Trigger: AATCAAGCAGCAGCAGTACGCAGACCTCCTGTCCCACGACCAGCTGCTCACAGAGAGGAGGGAGCAGAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000465281.1
ENST00000480983.1
ENST00000493632.5
ENST00000627169.2
ENST00000627349.1
ENST00000628814.2
ENST00000629540.1
ENST00000629761.2
ENST00000630854.3
CDS CCA 72 bp GTTGAGGGTAAAAACTTCTTGGGTGATATGGGCGGCTaGCCGGGAGGTGTCGGAGGACTTTCTCCCCTGCAG +
Preference number: 6 (lower is better)
Translates to: VEGKNFLGDMGG*PGGVGGLSPLQ
Trigger: CTGCAGGGGAGAAAGTCCTCCGACACCTCCCGGCCAGCCGCCCATATCACCCAAGAAGTTTTTACCCTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS CCA 72 bp TCTTCCCCAGGTCACTGGGCCTTGACTCCTGTGTCCTaGGAGGGAGACCCCGGTTTGCTGTTGAGGGTAAAA +
Preference number: 6 (lower is better)
Translates to: SSPGHWALTPVS*EGDPGLLLRVK
Trigger: TTTTACCCTCAACAGCAAACCGGGGTCTCCCTCCCAGGACACAGGAGTCAAGGCCCAGTGACCTGGGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CAA 90 bp GTGAGCAGCTGGTCGTGGGACAGGAGGTCTGCGTACTGCTGCTGCTaGATTTTCTGGATGATGGTTTCTGCCTCCCAGGTAGGCAGATCC +
Preference number: 6 (lower is better)
Translates to: VSSWSWDRRSAYCCC*IFWMMVSASQVGRS
Trigger: GGATCTGCCTACCTGGGAGGCAGAAACCATCATCCAGAAAATCAAGCAGCAGCAGTACGCAGACCTCCTGTCCCACGACCAGCTGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000472517.1
ENST00000480983.1
ENST00000493632.5
ENST00000627169.2
ENST00000627243.1
ENST00000628814.2
ENST00000629540.1
ENST00000629761.2
ENST00000630854.3
CDS GCA 72 bp AGATGCTCTTCTGGAAGCCCACTGGTGTCCATGCTTTaGAGTCGCTGGAACAATGTCTCGGAGAGGCTCGGC +
Preference number: 6 (lower is better)
Translates to: RCSSGSPLVSML*SRWNNVSERLG
Trigger: GCCGAGCCTCTCCGAGACATTGTTCCAGCGACTGCAAAGCATGGACACCAGTGGGCTTCCAGAAGAGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000474278.2
ENST00000496402.2
ENST00000629761.2
ENST00000630338.2
ENST00000630466.1
ENST00000630854.3
ENST00000631055.1
CDS GCA 72 bp ACGTTGTCAGTACAGATGTGGCTGATCCGGTTCTCGTaGTCAGGCTTGGCCAGCACCACGATGCGGATGTTC +
Preference number: 6 (lower is better)
Translates to: TLSVQMWLIRFS*SGLASTTMRMF
Trigger: GAACATCCGCATCGTGGTGCTGGCCAAGCCTGAGCACGAGAACCGGATCAGCCACATCTGTACTGACAACGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000472517.1
ENST00000493078.1
ENST00000627169.2
ENST00000627243.1
ENST00000628466.1
ENST00000629761.2
ENST00000630854.3
CDS GCA 72 bp CAGTGGTTCCCAAAGGGAGTTCCCTGGACCAGCAGCTaGACATCACCTGGGAACCAGTGTGTTTGCAATGCC +
Preference number: 6 (lower is better)
Translates to: QWFPKGVPWTSS*TSPGNQCVCNA
Trigger: GGCATTGCAAACACACTGGTTCCCAGGTGATGTGCAGCTGCTGGTCCAGGGAACTCCCTTTGGGAACCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472517.1
ENST00000627243.1
CDS CCA 72 bp CATGGGGTCGTGGCTGGTGAGGCTCTTCAGGGTCTTTaGCCCACTGGATTCATCACGCTCCGTCTTCACAAA +
Preference number: 6 (lower is better)
Translates to: HGVVAGEALQGL*PTGFITLRLHK
Trigger: TTTGTGAAGACGGAGCGTGATGAATCCAGTGGGCCAAAGACCCTGAAGAGCCTCACCAGCCACGACCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CCA 72 bp ATCTCCCAGGGACACCTCTGGGACACAGAGAACCACTaGCCTCAATCCCCTTTGCAGAGCCTGCCAGACAAA +
Preference number: 6 (lower is better)
Translates to: ISQGHLWDTENH*PQSPLQSLPDK
Trigger: TTTGTCTGGCAGGCTCTGCAAAGGGGATTGAGGCCAGTGGTTCTCTGTGTCCCAGAGGTGTCCCTGGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467393.5
ENST00000627806.2
CDS CAA 72 bp GTCGCCTGTGTCCTCTTCCTCCAGCGGCACAGGGTATaGCAGATGGGTCACCAGCCCCATGTTTTCCTTCTT +
Preference number: 6 (lower is better)
Translates to: VACVLFLQRHRV*QMGHQPHVFLL
Trigger: AAGAAGGAAAACATGGGGCTGGTGACCCATCTGCAATACCCTGTGCCGCTGGAGGAAGAGGACACAGGCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000467393.5
ENST00000474278.2
ENST00000627806.2
ENST00000629761.2
ENST00000630338.2
ENST00000630466.1
ENST00000630854.3
CDS GCA 72 bp AGCTGGTCGTGGGACAGGAGGTCTGCGTACTGCTGCTaGTTGATTTTCTGGATGATGGTTTCTGCCTCCCAG +
Preference number: 6 (lower is better)
Translates to: SWSWDRRSAYCC*LIFWMMVSASQ
Trigger: CTGGGAGGCAGAAACCATCATCCAGAAAATCAAGCAGCAGCAGTACGCAGACCTCCTGTCCCACGACCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000472517.1
ENST00000480983.1
ENST00000493632.5
ENST00000627169.2
ENST00000627243.1
ENST00000628814.2
ENST00000629540.1
ENST00000629761.2
ENST00000630854.3
CDS GCA 72 bp AGCAGCTGGTCGTGGGACAGGAGGTCTGCGTACTGCTaGTGCTTGATTTTCTGGATGATGGTTTCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: SSWSWDRRSAYC*CLIFWMMVSAS
Trigger: GGAGGCAGAAACCATCATCCAGAAAATCAAGCAGCAGCAGTACGCAGACCTCCTGTCCCACGACCAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000465281.1
ENST00000472517.1
ENST00000480983.1
ENST00000493632.5
ENST00000627169.2
ENST00000627243.1
ENST00000627349.1
ENST00000628814.2
ENST00000629540.1
ENST00000629761.2
ENST00000630854.3
CDS GCA 72 bp AGCTGGTCGTGGGACAGGAGGTCTGCGTACTGCTGCTaGTTGATTTTCTGGATGATGGTTTCTGCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: SWSWDRRSAYCC*LIFWMMVSASW
Trigger: CCAGGAGGCAGAAACCATCATCCAGAAAATCAAGCAGCAGCAGTACGCAGACCTCCTGTCCCACGACCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465281.1
ENST00000627349.1
CDS CCA 72 bp GGTTTGCTGTTGAGGGTAAAAACTTCTTGGGTGATATaGGCGGCTGGCCGGGAGGTGTCGGAGGACTTTCTC +
Preference number: 6 (lower is better)
Translates to: GLLLRVKTSWVI*AAGREVSEDFL
Trigger: GAGAAAGTCCTCCGACACCTCCCGGCCAGCCGCCCATATCACCCAAGAAGTTTTTACCCTCAACAGCAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS CAA 72 bp GTCGCTCGGGGATTCTCGTTTGAAAAAGGAACCTCCTaGGCCTCACAGGAGCTGGCAGTCAGCGGGATGTTT +
Preference number: 6 (lower is better)
Translates to: VARGFSFEKGTS*ASQELAVSGMF
Trigger: AAACATCCCGCTGACTGCCAGCTCCTGTGAGGCCAAGGAGGTTCCTTTTTCAAACGAGAATCCCCGAGCGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000474278.2
ENST00000496402.2
ENST00000629761.2
ENST00000630338.2
ENST00000630466.1
ENST00000630854.3
ENST00000631055.1
CDS CAA 72 bp AAGATGCTCTTCTGGAAGCCCACTGGTGTCCATGCTTaGCAGTCGCTGGAACAATGTCTCGGAGAGGCTCGG +
Preference number: 6 (lower is better)
Translates to: KMLFWKPTGVHA*QSLEQCLGEAR
Trigger: CCGAGCCTCTCCGAGACATTGTTCCAGCGACTGCAAAGCATGGACACCAGTGGGCTTCCAGAAGAGCATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000474278.2
ENST00000496402.2
ENST00000629761.2
ENST00000630338.2
ENST00000630466.1
ENST00000630854.3
ENST00000631055.1
CDS CAA 72 bp GATCTCCAGCCACTCCTTCTCACTCAGGGGGTCCTCTaGGGTGCCGATCACGTAAATGTCATGGGGGATGTA +
Preference number: 6 (lower is better)
Translates to: DLQPLLLTQGVL*GADHVNVMGDV
Trigger: TACATCCCCCATGACATTTACGTGATCGGCACCCAAGAGGACCCCCTGAGTGAGAAGGAGTGGCTGGAGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000493078.1
ENST00000627169.2
ENST00000628466.1
ENST00000629761.2
ENST00000630854.3
CDS CAA 72 bp ACTCCTGTGTCCTGGGAGGGAGACCCCGGTTTGCTGTaGAGGGTAAAAACTTCTTGGGTGATATGGGCGGCT +
Preference number: 6 (lower is better)
Translates to: TPVSWEGDPGLL*RVKTSWVIWAA
Trigger: AGCCGCCCATATCACCCAAGAAGTTTTTACCCTCAACAGCAAACCGGGGTCTCCCTCCCAGGACACAGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000417661.1
ENST00000445964.6
ENST00000627169.2
ENST00000628842.1
ENST00000629761.2
ENST00000630854.3
CDS GCA 72 bp GGGACCGTTCTTGGAGACAAACTGGGAAGTGACTCCTaGCTCAAATGTGGCAAAGACAGGGCTGTGGTCACT +
Preference number: 6 (lower is better)
Translates to: GTVLGDKLGSDS*LKCGKDRAVVT
Trigger: AGTGACCACAGCCCTGTCTTTGCCACATTTGAGGCAGGAGTCACTTCCCAGTTTGTCTCCAAGAACGGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000465281.1
ENST00000627169.2
ENST00000627349.1
ENST00000629761.2
ENST00000630854.3
CDS CCA 72 bp AAAGGGAGTTCCCTGGACCAGCAGCTGCACATCACCTaGGAACCAGTGTGTTTGCAATGCCTGTCTTCACGT +
Preference number: 6 (lower is better)
Translates to: KGSSLDQQLHIT*EPVCLQCLSSR
Trigger: ACGTGAAGACAGGCATTGCAAACACACTGGTTCCCAGGTGATGTGCAGCTGCTGGTCCAGGGAACTCCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472517.1
ENST00000627243.1
CDS CAA 72 bp GTCAAGTGGCTGTTGACGAACCCTAAGGAGGTTCCATaGAACATGAACGACACCCCCACGGCTCCCTTGTTC +
Preference number: 6 (lower is better)
Translates to: VKWLLTNPKEVP*NMNDTPTAPLF
Trigger: GAACAAGGGAGCCGTGGGGGTGTCGTTCATGTTCAATGGAACCTCCTTAGGGTTCGTCAACAGCCACTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000472517.1
ENST00000627169.2
ENST00000627243.1
ENST00000629761.2
ENST00000630854.3
CDS CAA 72 bp TGGTCGTGGGACAGGAGGTCTGCGTACTGCTGCTGCTaGATTTTCTGGATGATGGTTTCTGCCTCCCAGGTA +
Preference number: 6 (lower is better)
Translates to: WSWDRRSAYCCC*IFWMMVSASQV
Trigger: TACCTGGGAGGCAGAAACCATCATCCAGAAAATCAAGCAGCAGCAGTACGCAGACCTCCTGTCCCACGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000472517.1
ENST00000480983.1
ENST00000493632.5
ENST00000627169.2
ENST00000627243.1
ENST00000628814.2
ENST00000629540.1
ENST00000629761.2
ENST00000630854.3
CDS CAA 72 bp GCCTTGACTCCTGTGTCCTGGGAGGGAGACCCCGGTTaGCTGTTGAGGGTAAAAACTTCTTGGGTGATATGG +
Preference number: 6 (lower is better)
Translates to: ALTPVSWEGDPG*LLRVKTSWVIW
Trigger: CCATATCACCCAAGAAGTTTTTACCCTCAACAGCAAACCGGGGTCTCCCTCCCAGGACACAGGAGTCAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CAA 72 bp TGGTCGTGGGACAGGAGGTCTGCGTACTGCTGCTGCTaGATTTTCTGGATGATGGTTTCTGCCTCCTGGAAC +
Preference number: 6 (lower is better)
Translates to: WSWDRRSAYCCC*IFWMMVSASWN
Trigger: GTTCCAGGAGGCAGAAACCATCATCCAGAAAATCAAGCAGCAGCAGTACGCAGACCTCCTGTCCCACGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465281.1
ENST00000627349.1
CDS CAA 90 bp CAAGGCCTTGACCTTGTCTTCAATGGACGACAACAGGCTTGTCAGTaGGCTGAGCTTGGACACCATGTTGATGGGATTGGCCTCACCAGG +
Preference number: 6 (lower is better)
Translates to: QGLDLVFNGRQQACQ*AELGHHVDGIGLTR
Trigger: CCTGGTGAGGCCAATCCCATCAACATGGTGTCCAAGCTCAGCCAACTGACAAGCCTGTTGTCGTCCATTGAAGACAAGGTCAAGGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS CAA 90 bp GTGAGCAGCTGGTCGTGGGACAGGAGGTCTGCGTACTGCTGCTGCTaGATTTTCTGGATGATGGTTTCTGCCTCCTGGAACAAGAACATG +
Preference number: 6 (lower is better)
Translates to: VSSWSWDRRSAYCCC*IFWMMVSASWNKNM
Trigger: CATGTTCTTGTTCCAGGAGGCAGAAACCATCATCCAGAAAATCAAGCAGCAGCAGTACGCAGACCTCCTGTCCCACGACCAGCTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465281.1
ENST00000627349.1
CDS TCA 72 bp TTTAATACATGGGAGGCTCAGGTGGGGTGGATCGCTTaGGCCCCGATGTTTGAGGATGCAGTGAGCTGTGAT +
Preference number: 6 (lower is better)
Translates to: FNTWEAQVGWIA*APMFEDAVSCD
Trigger: ATCACAGCTCACTGCATCCTCAAACATCGGGGCTCAAGCGATCCACCCCACCTGAGCCTCCCATGTATTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451407.4
ENST00000630338.2
CDS CCA 72 bp CTGTCAACAGTCCCGGGACCGTTCTTGGAGACAAACTaGGAAGTGACTCCTGCCTCAAATGTGGCAAAGACA +
Preference number: 6 (lower is better)
Translates to: LSTVPGPFLETN*EVTPASNVAKT
Trigger: TGTCTTTGCCACATTTGAGGCAGGAGTCACTTCCCAGTTTGTCTCCAAGAACGGTCCCGGGACTGTTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000465281.1
ENST00000627169.2
ENST00000627349.1
ENST00000629761.2
ENST00000630854.3
CDS CAA 72 bp CAATGTGGCATAGCACCTGAGAAACTCAATCTGTCCTaGGCTGTCAACAGTCCCGGGACCGTTCTTGGAGAC +
Preference number: 6 (lower is better)
Translates to: QCGIAPEKLNLS*AVNSPGTVLGD
Trigger: GTCTCCAAGAACGGTCCCGGGACTGTTGACAGCCAAGGACAGATTGAGTTTCTCAGGTGCTATGCCACATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000465281.1
ENST00000627169.2
ENST00000627349.1
ENST00000629761.2
ENST00000630854.3
CDS CAA 72 bp CACTTGACTCCTGTGTCCTGGGAGGGAGACCCCGGTTaGCTGTTGAGGGTAAAAACTTCTTGGGTGATATGG +
Preference number: 6 (lower is better)
Translates to: HLTPVSWEGDPG*LLRVKTSWVIW
Trigger: CCATATCACCCAAGAAGTTTTTACCCTCAACAGCAAACCGGGGTCTCCCTCCCAGGACACAGGAGTCAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417661.1
ENST00000628842.1
CDS CAA 90 bp CTTCTTGTCGCCCAGGGCCAGGAACCGGAGAATGTTCATATAGTTTaGGTTTCGCCTAATGCAAGGAAAAAGCGGCCATCTAGCACGGGG +
Preference number: 6 (lower is better)
Translates to: LLVAQGQEPENVHIV*VSPNARKKRPSSTG
Trigger: CCCCGTGCTAGATGGCCGCTTTTTCCTTGCATTAGGCGAAACCAAAACTATATGAACATTCTCCGGTTCCTGGCCCTGGGCGACAAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493632.5
ENST00000628814.2
CDS CAA 90 bp CTTGGTCTTCAATGTGGCATAGCACCTGAGAAACTCAATCTGTCCTaGGCTGTCAACAGTCCCGGGACCGTTCTTGGAGACAAACTGGGA +
Preference number: 6 (lower is better)
Translates to: LGLQCGIAPEKLNLS*AVNSPGTVLGDKLG
Trigger: TCCCAGTTTGTCTCCAAGAACGGTCCCGGGACTGTTGACAGCCAAGGACAGATTGAGTTTCTCAGGTGCTATGCCACATTGAAGACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000465281.1
ENST00000627169.2
ENST00000627349.1
ENST00000629761.2
ENST00000630854.3
CDS TCA 72 bp CAAATGTGGCAAAGACAGGGCTGTGGTCACTCGTCATaGTGTCGCTGGTACTGCCATAAGACTGACACACCA +
Preference number: 6 (lower is better)
Translates to: QMWQRQGCGHSS*CRWYCHKTDTP
Trigger: TGGTGTGTCAGTCTTATGGCAGTACCAGCGACATCATGACGAGTGACCACAGCCCTGTCTTTGCCACATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000465281.1
ENST00000493632.5
ENST00000627169.2
ENST00000627349.1
ENST00000628814.2
ENST00000629761.2
ENST00000630854.3
CDS CCA 72 bp TCTCCAAGCAGCTCGAGTGGAACTCCAGGTAGAATTTaGTCTGGGACTTGGTCTTCAATGTGGCATAGCACC +
Preference number: 6 (lower is better)
Translates to: SPSSSSGTPGRI*SGTWSSMWHST
Trigger: GGTGCTATGCCACATTGAAGACCAAGTCCCAGACCAAATTCTACCTGGAGTTCCACTCGAGCTGCTTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CCA 72 bp GTCTATGAAGAGGACTCACCCCTGTCGCTTTCTGCTTaGTGTAGGCGTATTTGTCCCGAGTCAGTCTCTCAA +
Preference number: 6 (lower is better)
Translates to: VYEEDSPLSLSA*CRRICPESVSQ
Trigger: TTGAGAGACTGACTCGGGACAAATACGCCTACACCAAGCAGAAAGCGACAGGGGTGAGTCCTCTTCATAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480983.1
ENST00000629540.1
CDS CAA 72 bp GACCTTGTCTTCAATGGACGACAACAGGCTTGTCAGTaGGCTGAGCTTGGACACCATGTTGATGGGATTGGC +
Preference number: 6 (lower is better)
Translates to: DLVFNGRQQACQ*AELGHHVDGIG
Trigger: GCCAATCCCATCAACATGGTGTCCAAGCTCAGCCAACTGACAAGCCTGTTGTCGTCCATTGAAGACAAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000629761.2
ENST00000630854.3
CDS CAA 72 bp GACCAGCAGCTGCACATCACCTGGGAACCAGTGTGTTaGCAATGCCTGTCTTCACGTTGTCAGTACAGATGT +
Preference number: 6 (lower is better)
Translates to: DQQLHITWEPVC*QCLSSRCQYRC
Trigger: ACATCTGTACTGACAACGTGAAGACAGGCATTGCAAACACACTGGTTCCCAGGTGATGTGCAGCTGCTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472517.1
ENST00000627243.1
CDS TCA 72 bp AGCTCCTTGCAGAGCAGTGTGGTCAGTTTCTTCAGGTaGGGAAGACTGCTGGACCCTGTCTTCACAAATTCA +
Preference number: 6 (lower is better)
Translates to: SSLQSSVVSFFR*GRLLDPVFTNS
Trigger: TGAATTTGTGAAGACAGGGTCCAGCAGTCTTCCTCACCTGAAGAAACTGACCACACTGCTCTGCAAGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359570.9
ENST00000445964.6
ENST00000451407.4
ENST00000474278.2
ENST00000496402.2
ENST00000629761.2
ENST00000630338.2
ENST00000630466.1
ENST00000630854.3
ENST00000631055.1
CDS TCA 72 bp TGCATCAGAGATAGCAAGGATGAATCTCTAGTCCAGTaGCACTACATCTCCCAGGGACACCTCTGGGACACA +
Preference number: 6 (lower is better)
Translates to: CIRDSKDESLVQ*HYISQGHLWDT
Trigger: TGTGTCCCAGAGGTGTCCCTGGGAGATGTAGTGTCACTGGACTAGAGATTCATCCTTGCTATCTCTGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467393.5
ENST00000627806.2
CDS TCA 72 bp AGAGATTTCCAAGCTGTGCTCACCACTCAATTATTGTaGGTGCGGCAGAGGCATTTGTTCAGCCAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: RDFQAVLTTQLL*VRQRHLFSQAE
Trigger: CTCTGCCTGGCTGAACAAATGCCTCTGCCGCACTCACAATAATTGAGTGGTGAGCACAGCTTGGAAATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496402.2
ENST00000631055.1
CDS GCA 72 bp GAAGCTGCCAACATATGGAACTGCGGGCTTGAGGGATaGCTGCAGTTCACATTTGCATACAAATGGCCAAAC +
Preference number: 6 (lower is better)
Translates to: EAANIWNCGLEG*LQFTFAYKWPN
Trigger: GTTTGGCCATTTGTATGCAAATGTGAACTGCAGGCATCCCTCAAGCCCGCAGTTCCATATGTTGGCAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451407.4
ENST00000630338.2
CDS GCA 72 bp CACATATGCATAGGTACACACATACGCACTCACGCATaGACACACACACAAATGCACACGAACCCACGTGTG +
Preference number: 6 (lower is better)
Translates to: HICIGTHIRTHA*THTQMHTNPRV
Trigger: CACACGTGGGTTCGTGTGCATTTGTGTGTGTGTGCATGCGTGAGTGCGTATGTGTGTACCTATGCATATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491070.1
ENST00000629792.1
CDS CAA 90 bp TGGTTTCGCCTGAGTTTCTTTTCACTTCCTGAAGTCAAGTGGCTGTaGACGAACCCTAAGGAGGTTCCATTGAACATGAACGACACCCCC +
Preference number: 6 (lower is better)
Translates to: WFRLSFFSLPEVKWL*TNPKEVPLNMNDTP
Trigger: GGGGGTGTCGTTCATGTTCAATGGAACCTCCTTAGGGTTCGTCAACAGCCACTTGACTTCAGGAAGTGAAAAGAAACTCAGGCGAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000472517.1
ENST00000627169.2
ENST00000627243.1
ENST00000629761.2
ENST00000630854.3
CDS TCA 72 bp GAGTCAGTCTCTCAAAACGGTAGGTTGGGGCAAACGTaGTTTCTTCCTCCTCGAAGTGTAGGAAGACCTTCT +
Preference number: 6 (lower is better)
Translates to: ESVSQNGRLGQT*FLPPRSVGRPS
Trigger: AGAAGGTCTTCCTACACTTCGAGGAGGAAGAAATCACGTTTGCCCCAACCTACCGTTTTGAGAGACTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000465281.1
ENST00000480983.1
ENST00000493632.5
ENST00000627169.2
ENST00000627349.1
ENST00000628814.2
ENST00000629540.1
ENST00000629761.2
ENST00000630854.3
CDS GCA 72 bp TGTTTCAGGCGCTCAGTGAGGGAAAGGAAACTGAGCTaGGGAGAACTTCCTCATTACAGAAACCAAGCAAGA +
Preference number: 6 (lower is better)
Translates to: CFRRSVRERKLS*GELPHYRNQAR
Trigger: TCTTGCTTGGTTTCTGTAATGAGGAAGTTCTCCGCAGCTCAGTTTCCTTTCCCTCACTGAGCGCCTGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359570.9
ENST00000629761.2
CDS CCA 72 bp AAGGCAAGTTGTACTTCATCCCTGTCGCTTTCTGCTTaGTGTAGGCGTATTTGTCCCGAGTCAGTCTCTCAA +
Preference number: 6 (lower is better)
Translates to: KASCTSSLSLSA*CRRICPESVSQ
Trigger: TTGAGAGACTGACTCGGGACAAATACGCCTACACCAAGCAGAAAGCGACAGGGATGAAGTACAACTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000465281.1
ENST00000493632.5
ENST00000627169.2
ENST00000627349.1
ENST00000628814.2
ENST00000629761.2
ENST00000630854.3
CDS CAA 72 bp GTCCCTAAGAAGCTGCCAACATATGGAACTGCGGGCTaGAGGGATGCCTGCAGTTCACATTTGCATACAAAT +
Preference number: 6 (lower is better)
Translates to: VPKKLPTYGTAG*RDACSSHLHTN
Trigger: ATTTGTATGCAAATGTGAACTGCAGGCATCCCTCAAGCCCGCAGTTCCATATGTTGGCAGCTTCTTAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451407.4
ENST00000630338.2
CDS CAA 90 bp CCAACATATGGAACTGCGGGCTTGAGGGATGCCTGCAGTTCACATTaGCATACAAATGGCCAAACTGCCGTTCAGAAAACCCATTTCCAT +
Preference number: 6 (lower is better)
Translates to: PTYGTAGLRDACSSH*HTNGQTAVQKTHFH
Trigger: ATGGAAATGGGTTTTCTGAACGGCAGTTTGGCCATTTGTATGCAAATGTGAACTGCAGGCATCCCTCAAGCCCGCAGTTCCATATGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451407.4
ENST00000630338.2
CDS CAA 90 bp GTACTTGTAGTCCCTAAGAAGCTGCCAACATATGGAACTGCGGGCTaGAGGGATGCCTGCAGTTCACATTTGCATACAAATGGCCAAACT +
Preference number: 6 (lower is better)
Translates to: VLVVPKKLPTYGTAG*RDACSSHLHTNGQT
Trigger: AGTTTGGCCATTTGTATGCAAATGTGAACTGCAGGCATCCCTCAAGCCCGCAGTTCCATATGTTGGCAGCTTCTTAGGGACTACAAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451407.4
ENST00000630338.2
CDS GCA 72 bp ATGGCGACTGTTTTAAAAGTCACACTGGTGATTTCTTaGAGGGAGTGTTTGAGGATCTCCAGCCACTCCTTC +
Preference number: 6 (lower is better)
Translates to: MATVLKVTLVIS*RECLRISSHSF
Trigger: GAAGGAGTGGCTGGAGATCCTCAAACACTCCCTGCAAGAAATCACCAGTGTGACTTTTAAAACAGTCGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS GCA 72 bp CTGCTCACTGTTTTAAAAGTCACACTGGTGATTTCTTaGAGGGAGTGTTTGAGGATCTCCAGCCACTCCTTC +
Preference number: 6 (lower is better)
Translates to: LLTVLKVTLVIS*RECLRISSHSF
Trigger: GAAGGAGTGGCTGGAGATCCTCAAACACTCCCTGCAAGAAATCACCAGTGTGACTTTTAAAACAGTGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493078.1
ENST00000628466.1
CDS CCA 72 bp AGAACAGTGAAGATTCTAGATGGCTGTCTTCATTCCTaGGCCCCAGCTAGGCAAGATCAGCTTGGATTTGTA +
Preference number: 6 (lower is better)
Translates to: RTVKILDGCLHS*APARQDQLGFV
Trigger: TACAAATCCAAGCTGATCTTGCCTAGCTGGGGCCCAGGAATGAAGACAGCCATCTAGAATCTTCACTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493632.5
ENST00000628814.2
CDS CAA 72 bp GATGGCGACTGTTTTAAAAGTCACACTGGTGATTTCTaGCAGGGAGTGTTTGAGGATCTCCAGCCACTCCTT +
Preference number: 6 (lower is better)
Translates to: DGDCFKSHTGDF*QGVFEDLQPLL
Trigger: AAGGAGTGGCTGGAGATCCTCAAACACTCCCTGCAAGAAATCACCAGTGTGACTTTTAAAACAGTCGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000627169.2
ENST00000629761.2
ENST00000630854.3
CDS CAA 72 bp GCTGCTCACTGTTTTAAAAGTCACACTGGTGATTTCTaGCAGGGAGTGTTTGAGGATCTCCAGCCACTCCTT +
Preference number: 6 (lower is better)
Translates to: AAHCFKSHTGDF*QGVFEDLQPLL
Trigger: AAGGAGTGGCTGGAGATCCTCAAACACTCCCTGCAAGAAATCACCAGTGTGACTTTTAAAACAGTGAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493078.1
ENST00000628466.1
CDS GCA 72 bp TGCCTGCAGTTCACATTTGCATACAAATGGCCAAACTaGCGTTCAGAAAACCCATTTCCATTCCCAACAGCA +
Preference number: 6 (lower is better)
Translates to: CLQFTFAYKWPN*RSENPFPFPTA
Trigger: TGCTGTTGGGAATGGAAATGGGTTTTCTGAACGGCAGTTTGGCCATTTGTATGCAAATGTGAACTGCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451407.4
ENST00000630338.2
CDS GCA 72 bp CCGATACCTCCAGAGCCTGAATTGATACAATCGTCTTaGATCAGAGATAGCAAGGATGAATCTCTAGTCCAG +
Preference number: 6 (lower is better)
Translates to: PIPPEPELIQSS*IRDSKDESLVQ
Trigger: CTGGACTAGAGATTCATCCTTGCTATCTCTGATGCAAGACGATTGTATCAATTCAGGCTCTGGAGGTATCGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467393.5
ENST00000627806.2
CDS CCA 72 bp TTTCGCCTGAGTTTCTTTTCACTTCCTGAAGTCAAGTaGCTGTTGACGAACCCTAAGGAGGTTCCATTGAAC +
Preference number: 6 (lower is better)
Translates to: FRLSFFSLPEVK*LLTNPKEVPLN
Trigger: GTTCAATGGAACCTCCTTAGGGTTCGTCAACAGCCACTTGACTTCAGGAAGTGAAAAGAAACTCAGGCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000472517.1
ENST00000627169.2
ENST00000627243.1
ENST00000629761.2
ENST00000630854.3
CDS CAA 72 bp CTGAGTTTCTTTTCACTTCCTGAAGTCAAGTGGCTGTaGACGAACCCTAAGGAGGTTCCATTGAACATGAAC +
Preference number: 6 (lower is better)
Translates to: LSFFSLPEVKWL*TNPKEVPLNMN
Trigger: GTTCATGTTCAATGGAACCTCCTTAGGGTTCGTCAACAGCCACTTGACTTCAGGAAGTGAAAAGAAACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359570.9
ENST00000415617.5
ENST00000445964.6
ENST00000472517.1
ENST00000627169.2
ENST00000627243.1
ENST00000629761.2
ENST00000630854.3
CDS TCA 72 bp GTCCATCAGGCTAATGACACAAGGAAATATCTTTTCTaGCCTTCAGACAAAATTCCTCCACACGTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: VHQANDTRKYLF*PSDKIPPHVRS
Trigger: TGACCTCACGTGTGGAGGAATTTTGTCTGAAGGTCAGAAAAGATATTTCCTTGTGTCATTAGCCTGATGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493632.5
ENST00000628814.2
CDS CAA 72 bp AGTGTAAACGCAATTCCGATACCTCCAGAGCCTGAATaGATACAATCGTCTTGCATCAGAGATAGCAAGGAT +
Preference number: 6 (lower is better)
Translates to: SVNAIPIPPEPE*IQSSCIRDSKD
Trigger: ATCCTTGCTATCTCTGATGCAAGACGATTGTATCAATTCAGGCTCTGGAGGTATCGGAATTGCGTTTACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467393.5
ENST00000627806.2
CDS CAA 72 bp AGAAATGATGGGAACAGGCCCTGCTTACCCCCTTATTaGGCACAAATAAGTTTTGCTGATGAGTGCATAATT +
Preference number: 6 (lower is better)
Translates to: RNDGNRPCLPPY*AQISFADECII
Trigger: AATTATGCACTCATCAGCAAAACTTATTTGTGCCAAATAAGGGGGTAAGCAGGGCCTGTTCCCATCATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451407.4
ENST00000630338.2