RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INPP4A (Homo sapiens)

Ensembl gene IDs: ENSG00000040933

Ensembl transcript IDs: ENST00000074304.9, ENST00000409016.8, ENST00000409463.5, ENST00000409540.7, ENST00000409851.8, ENST00000463367.1, ENST00000467042.1, ENST00000468638.1, ENST00000498026.1, ENST00000523221.1

Found 1209 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTTCTGTCATCACTGCCACCCCTGCAGGTTCCACAGGGAGCGTGTaGTTCTGGGCTGGGGTTCCTTCTGTGCACAGCAGAGCAGTGCCC +
Preference number: 1 (lower is better)
Translates to: GSVITATPAGSTGSV*FWAGVPSVHSRAVP
Trigger: GGGCACTGCTCTGCTGTGCACAGAAGGAACCCCAGCCCAGAAGCACACGCTCCCTGTGGAACCTGCAGGGGTGGCAGTGATGACAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 90 bp ACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGTaGCGAGGAGGAGGAAGCAGTGAAGTGCTGTGTCTGTCTACATCC +
Preference number: 1 (lower is better)
Translates to: TTRRESGHRHRGRAG*RGGGSSEVLCLSTS
Trigger: GGATGTAGACAGACACAGCACTTCACTGCTTCCTCCTCCTCGCCACCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR TCA 90 bp CTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTGACTTCTaGGTAGGAGGGGGTCTGGAAGGTCATCCAGTTCCACCCTACCTG +
Preference number: 1 (lower is better)
Translates to: LQASGDSRRCLHADF*VGGGLEGHPVPPYL
Trigger: CAGGTAGGGTGGAACTGGATGACCTTCCAGACCCCCTCCTACTCAGAAGTCAGCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR TCA 90 bp TTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTaGCTTCTGAGTAGGAGGGGGTCTGGAAGGTCATCCAGTTCCACC +
Preference number: 1 (lower is better)
Translates to: FLPAGIGRQQALLAC*LLSRRGSGRSSSST
Trigger: GGTGGAACTGGATGACCTTCCAGACCCCCTCCTACTCAGAAGTCAGCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR GCA 90 bp CACTTTAGTCCAGCCCCTCGTCGTGGGCACGCAGCCACACCACCATaGCCACAAGGACATGGCTGTCCCATATGTCCCACCTTCCATGGT +
Preference number: 1 (lower is better)
Translates to: HFSPAPRRGHAATPP*PQGHGCPICPTFHG
Trigger: ACCATGGAAGGTGGGACATATGGGACAGCCATGTCCTTGTGGGCATGGTGGTGTGGCTGCGTGCCCACGACGAGGGGCTGGACTAAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 90 bp GCAGAGTTCTGTGAGGGCCTGCCTGCCAGGAGGAACTGCTGGTCTTaGAAGAGCCATCCCAGGAACACGATGGCATGTGAGGCCAGTTCC +
Preference number: 1 (lower is better)
Translates to: AEFCEGLPARRNCWS*KSHPRNTMACEASS
Trigger: GGAACTGGCCTCACATGCCATCGTGTTCCTGGGATGGCTCTTCCAAGACCAGCAGTTCCTCCTGGCAGGCAGGCCCTCACAGAACTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 90 bp TCCAACCTCCAGCTCCTCTTACCTTCCTCCAGCGCAAAGCCTCCCTaGGACAACTCCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCA +
Preference number: 1 (lower is better)
Translates to: SNLQLLLPSSSAKPP*DNSPRSGQPDCAKS
Trigger: TGACTTGGCACAATCTGGCTGCCCAGATCTAGGGGAGTTGTCCCAGGGAGGCTTTGCGCTGGAGGAAGGTAAGAGGAGCTGGAGGTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR GCA 90 bp CAGGTTCCACAGGGAGCGTGTGCTTCTGGGCTGGGGTTCCTTCTGTaGACAGCAGAGCAGTGCCCTCACTATAACTTACAGAAAATCGGC +
Preference number: 1 (lower is better)
Translates to: QVPQGACASGLGFLL*TAEQCPHYNLQKIG
Trigger: GCCGATTTTCTGTAAGTTATAGTGAGGGCACTGCTCTGCTGTGCACAGAAGGAACCCCAGCCCAGAAGCACACGCTCCCTGTGGAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 90 bp CCAGGAGGAACTGCTGGTCTTGGAAGAGCCATCCCAGGAACACGATaGCATGTGAGGCCAGTTCCTTCTGTCCATGTGTTCCCAATACCC +
Preference number: 1 (lower is better)
Translates to: PGGTAGLGRAIPGTR*HVRPVPSVHVFPIP
Trigger: GGGTATTGGGAACACATGGACAGAAGGAACTGGCCTCACATGCCATCGTGTTCCTGGGATGGCTCTTCCAAGACCAGCAGTTCCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 90 bp AAACAAGACCAAGCTACTCTCCGTTTGCCTACTGTTGGCACAGGATaGGGGGTGGAATCGTATGGAGGGTGCAGCCTCAGGCTGGAGAAG +
Preference number: 1 (lower is better)
Translates to: KQDQATLRLPTVGTG*GVESYGGCSLRLEK
Trigger: CTTCTCCAGCCTGAGGCTGCACCCTCCATACGATTCCACCCCCCATCCTGTGCCAACAGTAGGCAAACGGAGAGTAGCTTGGTCTTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR GCA 90 bp AGAAGAGAGTTTGTCCATCTCCAAATGCAGAGTTCTGTGAGGGCCTaGCTGCCAGGAGGAACTGCTGGTCTTGGAAGAGCCATCCCAGGA +
Preference number: 1 (lower is better)
Translates to: RREFVHLQMQSSVRA*LPGGTAGLGRAIPG
Trigger: TCCTGGGATGGCTCTTCCAAGACCAGCAGTTCCTCCTGGCAGGCAGGCCCTCACAGAACTCTGCATTTGGAGATGGACAAACTCTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR GCA 90 bp TCTGTTATGTGGGACAACAGTGTGAAAGACCTGCCTGGACTGGCCTaGAAGGCCCACAGGGGCCTGATGCAGGAAGAAATCATGGCAAAG +
Preference number: 1 (lower is better)
Translates to: SVMWDNSVKDLPGLA*KAHRGLMQEEIMAK
Trigger: CTTTGCCATGATTTCTTCCTGCATCAGGCCCCTGTGGGCCTTGCAGGCCAGTCCAGGCAGGTCTTTCACACTGTTGTCCCACATAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR TCA 90 bp CCAGAATGGCATGCGGAGGGAGGGCAGGAAGAAGCTCACGGTAGCTaGTGTCTGGGCGTCCTGACATGTCTTCTTCTTGGCTTAACTTTA +
Preference number: 1 (lower is better)
Translates to: PEWHAEGGQEEAHGS*CLGVLTCLLLGLTL
Trigger: TAAAGTTAAGCCAAGAAGAAGACATGTCAGGACGCCCAGACATCAGCTACCGTGAGCTTCTTCCTGCCCTCCCTCCGCATGCCATTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 90 bp CTCAGCTTTTTCTGTTATGTGGGACAACAGTGTGAAAGACCTGCCTaGACTGGCCTGCAAGGCCCACAGGGGCCTGATGCAGGAAGAAAT +
Preference number: 1 (lower is better)
Translates to: LSFFCYVGQQCERPA*TGLQGPQGPDAGRN
Trigger: ATTTCTTCCTGCATCAGGCCCCTGTGGGCCTTGCAGGCCAGTCCAGGCAGGTCTTTCACACTGTTGTCCCACATAACAGAAAAAGCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR TCA 90 bp GAACTGCTGGTCTTGGAAGAGCCATCCCAGGAACACGATGGCATGTaGGGCCAGTTCCTTCTGTCCATGTGTTCCCAATACCCCTATACA +
Preference number: 1 (lower is better)
Translates to: ELLVLEEPSQEHDGM*GQFLLSMCSQYPYT
Trigger: TGTATAGGGGTATTGGGAACACATGGACAGAAGGAACTGGCCTCACATGCCATCGTGTTCCTGGGATGGCTCTTCCAAGACCAGCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR TCA 90 bp TTCCCACTCAAAAGTCATCATTTGGCCACCAGACAAATCGTAGACTaGTCCTGGGGCCGATGTCCACGGTGCTGGTTGGTACCCACAGTT +
Preference number: 1 (lower is better)
Translates to: FPLKSHHLATRQIVD*SWGRCPRCWLVPTV
Trigger: AACTGTGGGTACCAACCAGCACCGTGGACATCGGCCCCAGGATCAGTCTACGATTTGTCTGGTGGCCAAATGATGACTTTTGAGTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR GCA 90 bp GAGAGGTCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTaGATGGATGGAAATTATGGGATGGTTCTCAAGAGATACAGGTTC +
Preference number: 1 (lower is better)
Translates to: ERSRSEGTDTDQALG*MDGNYGMVLKRYRF
Trigger: GAACCTGTATCTCTTGAGAACCATCCCATAATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 90 bp AGGGGCCTGATGCAGGAAGAAATCATGGCAAAGACAGGGTTCCAGTaGAGGGAATCTAGAGTATGGGTGTTTTCAGGCTACACCCTGGGA +
Preference number: 1 (lower is better)
Translates to: RGLMQEEIMAKTGFQ*RESRVWVFSGYTLG
Trigger: TCCCAGGGTGTAGCCTGAAAACACCCATACTCTAGATTCCCTCCACTGGAACCCTGTCTTTGCCATGATTTCTTCCTGCATCAGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 90 bp TGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTATGTaGGACAACAGTGTGAAAGACCTGCCTGGACTGGCCTGCAAGGCC +
Preference number: 1 (lower is better)
Translates to: CKCVSYPVCSAFSVM*DNSVKDLPGLACKA
Trigger: GGCCTTGCAGGCCAGTCCAGGCAGGTCTTTCACACTGTTGTCCCACATAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 90 bp GGTCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATaGATGGAAATTATGGGATGGTTCTCAAGAGATACAGGTTCAGTG +
Preference number: 1 (lower is better)
Translates to: GPDPRGLIQTRPWGA*MEIMGWFSRDTGSV
Trigger: CACTGAACCTGTATCTCTTGAGAACCATCCCATAATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 90 bp CTCAGGAGAGGTCCAGATCCGAGGGGACTGATACAGACCAGGCCTTaGGGTGCATGGATGGAAATTATGGGATGGTTCTCAAGAGATACA +
Preference number: 1 (lower is better)
Translates to: LRRGPDPRGLIQTRP*GAWMEIMGWFSRDT
Trigger: TGTATCTCTTGAGAACCATCCCATAATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGACCTCTCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR TCA 90 bp AGCGCTCTCTCTGCCAGAGGCCGCGCTGCTTGGTGTTCACAGGAATaGAAGATCTTTTTGGTCAGCATATACCTCTCAGAAAAGGATGCT +
Preference number: 1 (lower is better)
Translates to: SALSARGRAAWCSQE*KIFLVSIYLSEKDA
Trigger: AGCATCCTTTTCTGAGAGGTATATGCTGACCAAAAAGATCTTTCATTCCTGTGAACACCAAGCAGCGCGGCCTCTGGCAGAGAGAGCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR TCA 90 bp GAGATACAGGTTCAGTGGCTGATTGATGGGATGTGGAGGAGAAAATaGTCCCAAGGTCGTCTATTAGAGGGAGACTCAGCCAGCTTGGAG +
Preference number: 1 (lower is better)
Translates to: EIQVQWLIDGMWRRK*SQGRLLEGDSASLE
Trigger: CTCCAAGCTGGCTGAGTCTCCCTCTAATAGACGACCTTGGGATCATTTTCTCCTCCACATCCCATCAATCAGCCACTGAACCTGTATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR GCA 90 bp GTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAGGCCGCGCTaGTTGGTGTTCACAGGAATGAAAGATCTTTTTGGTCAGCATATA +
Preference number: 1 (lower is better)
Translates to: VSICTTQRSLCQRPR*LVFTGMKDLFGQHI
Trigger: TATATGCTGACCAAAAAGATCTTTCATTCCTGTGAACACCAAGCAGCGCGGCCTCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 90 bp AGTATGGGTGTTTTCAGGCTACACCCTGGGAACCCTGTCGTAGCCTaGAGGGCAACAGCTAATAAAAACAAGACCAAGCTACTCTCCGTT +
Preference number: 1 (lower is better)
Translates to: SMGVFRLHPGNPVVA*RATANKNKTKLLSV
Trigger: AACGGAGAGTAGCTTGGTCTTGTTTTTATTAGCTGTTGCCCTCCAGGCTACGACAGGGTTCCCAGGGTGTAGCCTGAAAACACCCATACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR GCA 90 bp TCCTCTTTGGAGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTaGTCAGCTTTTTCTGTTATGTGGGACAACAGTGTGAAAGACCTG +
Preference number: 1 (lower is better)
Translates to: SSLEPWRCKCVSYPV*SAFSVMWDNSVKDL
Trigger: CAGGTCTTTCACACTGTTGTCCCACATAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCTCCAAAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 90 bp CGAGCACTCAATGCAATGCCCAAGAACAATGGTCCAGTCACAGGCTaGTCACATAGAACTAGTCCTCCTAATAGGATGAATCAGGCAAGA +
Preference number: 1 (lower is better)
Translates to: RALNAMPKNNGPVTG*SHRTSPPNRMNQAR
Trigger: TCTTGCCTGATTCATCCTATTAGGAGGACTAGTTCTATGTGACCAGCCTGTGACTGGACCATTGTTCTTGGGCATTGCATTGAGTGCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR CCA 90 bp GTGTCTGTCTACATCCATCTAACACAGGCATCCTCTTTGGAGCCATaGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCT +
Preference number: 1 (lower is better)
Translates to: VSVYIHLTQASSLEP*RCKCVSYPVCSAFS
Trigger: AGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCTCCAAAGAGGATGCCTGTGTTAGATGGATGTAGACAGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR TCA 90 bp CTCTATGGTCATAAATTCCCCATGGGAGTGTTGACATGCCACATCTaGGGCCCTACATTAACATCTAGAGAAGAAGGGGAGATGTGTCCT +
Preference number: 1 (lower is better)
Translates to: LYGHKFPMGVLTCHI*GPTLTSREEGEMCP
Trigger: AGGACACATCTCCCCTTCTTCTCTAGATGTTAATGTAGGGCCTCAGATGTGGCATGTCAACACTCCCATGGGGAATTTATGACCATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR TCA 90 bp CAACAAACTTTAGCTCCTTCACAGCGGGCATTACACTTGCTCTTGTaGATACAGAGGGGACTGACAGTGGACAGGACATGCATGAAAGAA +
Preference number: 1 (lower is better)
Translates to: QQTLAPSQRALHLLL*IQRGLTVDRTCMKE
Trigger: TTCTTTCATGCATGTCCTGTCCACTGTCAGTCCCCTCTGTATTCACAAGAGCAAGTGTAATGCCCGCTGTGAAGGAGCTAAAGTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR GCA 90 bp CCCATGTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATaGCCAAGAACAATGGTCCAGTCACAGGCTGGTCACATAGAACTA +
Preference number: 1 (lower is better)
Translates to: PMFTNMYSAPEHSMQ*PRTMVQSQAGHIEL
Trigger: TAGTTCTATGTGACCAGCCTGTGACTGGACCATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAACATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR GCA 90 bp GTCTACATCCATCTAACACAGGCATCCTCTTTGGAGCCATGGAGATaGAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTATG +
Preference number: 1 (lower is better)
Translates to: VYIHLTQASSLEPWR*KCVSYPVCSAFSVM
Trigger: CATAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCTCCAAAGAGGATGCCTGTGTTAGATGGATGTAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR TCA 90 bp TTGACAAGTCATACAACGAGGACTGGGTTACCCACAGAGATGATGTaGTCCATGTTCACAGACGGGAAGGTAACAACAATGGCTACCATT +
Preference number: 1 (lower is better)
Translates to: LTSHTTRTGLPTEMM*SMFTDGKVTTMATI
Trigger: AATGGTAGCCATTGTTGTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTCCTCGTTGTATGACTTGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR TCA 90 bp GATGGAAATTATGGGATGGTTCTCAAGAGATACAGGTTCAGTGGCTaGTTGATGGGATGTGGAGGAGAAAATGATCCCAAGGTCGTCTAT +
Preference number: 1 (lower is better)
Translates to: DGNYGMVLKRYRFSG*LMGCGGENDPKVVY
Trigger: ATAGACGACCTTGGGATCATTTTCTCCTCCACATCCCATCAATCAGCCACTGAACCTGTATCTCTTGAGAACCATCCCATAATTTCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR TCA 90 bp GAAATTATGGGATGGTTCTCAAGAGATACAGGTTCAGTGGCTGATTaGTGGGATGTGGAGGAGAAAATGATCCCAAGGTCGTCTATTAGA +
Preference number: 1 (lower is better)
Translates to: EIMGWFSRDTGSVAD*WDVEEKMIPRSSIR
Trigger: TCTAATAGACGACCTTGGGATCATTTTCTCCTCCACATCCCATCAATCAGCCACTGAACCTGTATCTCTTGAGAACCATCCCATAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 90 bp TTAATACAAGTGGAACTGCATTTTGACAAGTCATACAACGAGGACTaGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAA +
Preference number: 1 (lower is better)
Translates to: LIQVELHFDKSYNED*VTHRDDVIHVHRRE
Trigger: TTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTCCTCGTTGTATGACTTGTCAAAATGCAGTTCCACTTGTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR CCA 90 bp CGTGATGCATTTAGCGTAACCGATTATGTAGTGAGAAAAACAGCGTaGTCCAGTGCTGAAATAGGAAATATTTCAGTTGAACACCACAAA +
Preference number: 1 (lower is better)
Translates to: RDAFSVTDYVVRKTA*SSAEIGNISVEHHK
Trigger: TTTGTGGTGTTCAACTGAAATATTTCCTATTTCAGCACTGGACCACGCTGTTTTTCTCACTACATAATCGGTTACGCTAAATGCATCACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTGTGTCCTCTGGGCGTaGGGGAGCCTCGGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: TDIFLPAGIGRQQALLACCVLWA*GSLGRE
Trigger: CTCCCTGCCGAGGCTCCCTCACGCCCAGAGGACACA...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGAGGATCCCACTACACTaGAGAGCACGGTGTAGCCCC +
Preference number: 2 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGRIPLH*RARCSP
Trigger: GGGGCTACACCGTGCTCTGCAGTGTAGTGGGATCCT...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGAAGAGAGGAGCTGCTTaGCTCTGTGCCACACACCCT +
Preference number: 2 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGKRGAA*LCATHP
Trigger: AGGGTGTGTGGCACAGAGGCAAGCAGCTCCTCTCTT...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGGAATCGTATGGAGGGTaGAGCCTCAGGCTGGAGAAG +
Preference number: 2 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGESYGG*SLRLEK
Trigger: CTTCTCCAGCCTGAGGCTGCACCCTCCATACGATTC...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCATGTGTCCTCTGGGCGTaGGGGAGCCTCGGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSCVLWA*GSLGRE
Trigger: CTCCCTGCCGAGGCTCCCTCACGCCCAGAGGACACA...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAAAGCAGTCCTCCCCATaGCTCAGCACCCCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARKQSSP*LSTPGP
Trigger: TGGGCCAGGGGTGCTGAGGCATGGGGAGGACTGCTT...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGACAGCCACCTGTGCAGTaGGTTTGGCGGGCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARQPPVQ*VWRAGA
Trigger: AGCTCCTGCCCGCCAAACCCACTGCACAGGTGGCTG...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATCAGCCACCTGTGCAGTaGGTTTGGCGGGCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNQPPVQ*VWRAGA
Trigger: AGCTCCTGCCCGCCAAACCCACTGCACAGGTGGCTG...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGAATGCCCAAGAACAATaGTCCAGTCACAGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGNAQEQ*SSHRLV
Trigger: GACCAGCCTGTGACTGGACCATTGTTCTTGGGCATT...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGGAGATGGTGGAGAGGTaGAAGGGTAAATCAGCCATA +
Preference number: 2 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGEMVER*KGKSAI
Trigger: TATGGCTGATTTACCCTTTCACCTCTCCACCATCTC...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAGGCACTGGAAGCGTGTaGTGCTGCCGGAAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSGTGSV*CCRKPR
Trigger: CCTGGGCTTCCGGCAGCATCACACGCTTCCAGTGCC...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAGGGCAGGAGCTTCTCTaGTTCCTGCCTGCCACAGTG +
Preference number: 2 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARGQELL*FLPATV
Trigger: CACTGTGGCAGGCAGGAAGCAGAGAAGCTCCTGCCC...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGACCTGTGCAGTGGGTTTaGCGGGCAGGAGCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGPVQWV*RAGASL
Trigger: CAGAGAAGCTCCTGCCCGCCAAACCCACTGCACAGG...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGTCCTCTTTGGAGCCATaGAGATGCAAGTGTGTTTCC +
Preference number: 2 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGSSLEP*RCKCVS
Trigger: GGAAACACACTTGCATCTCCATGGCTCCAAAGAGGA...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CAA 90 bp TGGTTGGTACCCACAGTTAGCGTCAGCAGGGCATCAGGAGGTCAGTaGCAGCCAGGGCCACTATTGGGAGCAGACAGCCTGCTAAACACA +
Preference number: 2 (lower is better)
Translates to: WLVPTVSVSRASGGQ*QPGPLLGADSLLNT
Trigger: TGTGTTTAGCAGGCTGTCTGCTCCCAATAGTGGCCCTGGCTGCAACTGACCTCCTGATGCCCTGCTGACGCTAACTGTGGGTACCAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGATCCCCATGGGAGTGTTaGCATGCCACATCTGAGGCC +
Preference number: 2 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARSPWEC*HATSEA
Trigger: GGCCTCAGATGTGGCATGTCAACACTCCCATGGGGA...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACGGCACTGGAAGCGTGTaGTGCTGCCGGAAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNGTGSV*CCRKPR
Trigger: CCTGGGCTTCCGGCAGCATCACACGCTTCCAGTGCC...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAAAGCAGTCCTCCCCATaGCTCAGCACCCCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSKQSSP*LSTPGP
Trigger: TGGGCCAGGGGTGCTGAGGCATGGGGAGGACTGCTT...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATAGTTCTGTGAGGGCCTaGCTGCCAGGAGGAACTGCT +
Preference number: 2 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNSSVRA*LPGGTA
Trigger: AGCAGTTCCTCCTGGCAGGCAGGCCCTCACAGAACT...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCGTGGCCCCAACTATGTaGGGTACCTTGCAGGTGTTA +
Preference number: 2 (lower is better)
Translates to: LHRHFPPCRHRETAGAACVAPTM*GTLQVL
Trigger: TAACACCTGCAAGGTACCCCACATAGTTGGGGCCAC...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCACAGCCACCTGTGCAGTaGGTTTGGCGGGCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSQPPVQ*VWRAGA
Trigger: AGCTCCTGCCCGCCAAACCCACTGCACAGGTGGCTG...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGAGGGAATCTAGAGTATaGGTGTTTTCAGGCTACACC +
Preference number: 2 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGRESRV*VFSGYT
Trigger: GGTGTAGCCTGAAAACACCCATACTCTAGATTCCCT...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGACAGTTCCACCCTACCTaGTGCCCACCCCCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: QPAKHKFPSVQPSALSARQFHPT*CPPPLC
Trigger: ACACAGAGGGGGTGGGCATCAGGTAGGGTGGAACTG...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAGCGCTGCTTGCATGCTaGCTTCTGAGTAGGAGGGGG +
Preference number: 2 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSALLAC*LLSRRG
Trigger: CCCCCTCCTACTCAGAAGTCAGCATGCAAGCAGCGC...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGCTATGTGGGGTACCTTaGAGGTGTTACCTTCTAATA +
Preference number: 2 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGLCGVP*RCYLLI
Trigger: TATTAGAAGGTAACACCTGCAAGGTACCCCACATAG...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCCTAAAGGGACCTTACTaGTGGCTTTGTGTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: TDIFLPAGIGRQQALLACLKGPY*WLCVSS
Trigger: GCTGGAGACACAAAGCCAGCAGTAAGGTCCCTTTAG...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACAGCAGCAGCCACCTGTaGAGTGGGTTTGGCGGGCAG +
Preference number: 2 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNSSSHL*SGFGGQ
Trigger: CTGCCCGCCAAACCCACTGCACAGGTGGCTGCTGCT...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAAAGAGAGGAGCTGCTTaGCTCTGTGCCACACACCCT +
Preference number: 2 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGKRGAA*LCATHP
Trigger: AGGGTGTGTGGCACAGAGGCAAGCAGCTCCTCTCTT...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGATCACCCTGCAGGCACTaGAAGCGTGTGATGCTGCCG +
Preference number: 2 (lower is better)
Translates to: QPAKHKFPSVQPSALSARSPCRH*KRVMLP
Trigger: CGGCAGCATCACACGCTTCCAGTGCCTGCAGGGTGA...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CAA 90 bp AGCGTCAGCAGGGCATCAGGAGGTCAGTTGCAGCCAGGGCCACTATaGGGAGCAGACAGCCTGCTAAACACAAGTTTCCATCTGTACAAC +
Preference number: 2 (lower is better)
Translates to: SVSRASGGQLQPGPL*GADSLLNTSFHLYN
Trigger: GTTGTACAGATGGAAACTTGTGTTTAGCAGGCTGTCTGCTCCCAATAGTGGCCCTGGCTGCAACTGACCTCCTGATGCCCTGCTGACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGACCGGAAGCCCAGGAATaGTGCCTTCAGAGAGAATAC +
Preference number: 2 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGPEAQE*CLQREY
Trigger: GTATTCTCTCTGAAGGCATCATTCCTGGGCTTCCGG...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATAGACAAATCGTAGACTaGTCCTGGGGCCGATGTCCA +
Preference number: 2 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNRQIVD*SWGRCP
Trigger: TGGACATCGGCCCCAGGATCAGTCTACGATTTGTCT...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAAGACATTTTCCTCCCTaGAGGCATCGGGAGACAGCA +
Preference number: 2 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARRHFPP*RHRETA
Trigger: TGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCT...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATACAGAAGAGAGGAGCTaGTTGCCTCTGTGCCACACA +
Preference number: 2 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNTEERS*LPLCHT
Trigger: TGTGTGGCACAGAGGCAAGCAGCTCCTCTCTTCTGT...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAGCAGCCACACCACCATaGCCACAAGGACATGGCTGT +
Preference number: 2 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSAATPP*PQGHGC
Trigger: ACAGCCATGTCCTTGTGGGCATGGTGGTGTGGCTGC...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGGCTTTTTCTGTTATGTaGGACAACAGTGTGAAAGAC +
Preference number: 2 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGAFSVM*DNSVKD
Trigger: GTCTTTCACACTGTTGTCCCACATAACAGAAAAAGC...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGCTTCAGAGAGAATACTaGAACCTGAACCTTTTCTAT +
Preference number: 2 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGLQREY*NLNLFY
Trigger: ATAGAAAAGGTTCAGGTTTCAGTATTCTCTCTGAAG...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGGAACAAGCATCAAAATaGAAGACAGGTATATGTGAC +
Preference number: 2 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGEQASK*KTGICD
Trigger: GTCACATATACCTGTCTTTCATTTTGATGCTTGTTC...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGACTAAAGGGACCTTACTaGTGGCTTTGTGTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGLKGPY*WLCVSS
Trigger: GCTGGAGACACAAAGCCAGCAGTAAGGTCCCTTTAG...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACGGGACCTGGTCTGTGTaGTCCCAAAGTCCGTGCTCT +
Preference number: 2 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNGTWSV*SQSPCS
Trigger: AGAGCACGGACTTTGGGAGCACACAGACCAGGTCCC...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAAAGACCTGCCTGGACTaGCCTGCAAGGCCCACAGGG +
Preference number: 2 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLKTCLD*PARPTG
Trigger: CCCTGTGGGCCTTGCAGGCCAGTCCAGGCAGGTCTT...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTATGTGTCCTCTGGGCGTaGGGGAGCCTCGGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLCVLWA*GSLGRE
Trigger: CTCCCTGCCGAGGCTCCCTCACGCCCAGAGGACACA...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCTCCCCATGGGAGTGTTaGCATGCCACATCTGAGGCC +
Preference number: 2 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSSPWEC*HATSEA
Trigger: GGCCTCAGATGTGGCATGTCAACACTCCCATGGGGA...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAGGTTACCCACAGAGATaGTGTGATCCATGTTCACAG +
Preference number: 2 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARGYPQR*CDPCSQ
Trigger: CTGTGAACATGGATCACATCATCTCTGTGGGTAACC...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATTTGGAGCCATGGAGATaGAAGTGTGTTTCCTACCCT +
Preference number: 2 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNLEPWR*KCVSYP
Trigger: AGGGTAGGAAACACACTTGCATCTCCATGGCTCCAA...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATAAGACAGGGTTCCAGTaGAGGGAATCTAGAGTATGG +
Preference number: 2 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNKTGFQ*RESRVW
Trigger: CCATACTCTAGATTCCCTCCACTGGAACCCTGTCTT...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATGAGATACAGGTTCAGTaGCTGATTGATGGGATGTGG +
Preference number: 2 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNEIQVQ*LIDGMW
Trigger: CCACATCCCATCAATCAGCCACTGAACCTGTATCTC...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CAA 90 bp GCTTCAGAGAACAGGAGACAGGCTAAAGGGACCTTACTGCTGGCTTaGTGTCTCCAGCAGACTCCCTGTTCTGTAACTCATAAGGGACAG +
Preference number: 2 (lower is better)
Translates to: ASENRRQAKGTLLLA*CLQQTPCSVTHKGQ
Trigger: CTGTCCCTTATGAGTTACAGAACAGGGAGTCTGCTGGAGACACAAAGCCAGCAGTAAGGTCCCTTTAGCCTGTCTCCTGTTCTCTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR CAA 90 bp TCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAGGCCGCGCTGCTaGGTGTTCACAGGAATGAAAGATCTTTTTGGTCAGCATATACCT +
Preference number: 2 (lower is better)
Translates to: SICTTQRSLCQRPRC*VFTGMKDLFGQHIP
Trigger: AGGTATATGCTGACCAAAAAGATCTTTCATTCCTGTGAACACCAAGCAGCGCGGCCTCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCGTTATTCTCACTGCATaGGATAGTGCTAGCTTCTTT +
Preference number: 2 (lower is better)
Translates to: LHRHFPPCRHRETAGAACVILTA*DSASFF
Trigger: AAAGAAGCTAGCACTATCTCATGCAGTGAGAATAAC...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGATTGACATGCCACATCTaGGGCCCTACATTAACATCT +
Preference number: 2 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARLTCHI*GPTLTS
Trigger: AGATGTTAATGTAGGGCCTCAGATGTGGCATGTCAA...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCCAGTTCCACCCTACCTaGTGCCCACCCCCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAQFHPT*CPPPLC
Trigger: ACACAGAGGGGGTGGGCATCAGGTAGGGTGGAACTG...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACTTGCATGCTGACTTCTaGGTAGGAGGGGGTCTGGAA +
Preference number: 2 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNLHADF*VGGGLE
Trigger: TTCCAGACCCCCTCCTACTCAGAAGTCAGCATGCAA...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACGGCACTGGAAGCGTGTaGTGCTGCCGGAAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNGTGSV*CCRKPR
Trigger: CCTGGGCTTCCGGCAGCATCACACGCTTCCAGTGCC...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAGTCCTCCTAATAGGATaGATCAGGCAAGACCACATT +
Preference number: 2 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGVLLIG*IRQDHI
Trigger: AATGTGGTCTTGCCTGATTCATCCTATTAGGAGGAC...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCACACAGTGGTGCAAGATaGAGTCCTGGTGACGATGAA +
Preference number: 2 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSHSGAR*SPGDDE
Trigger: TTCATCGTCACCAGGACTGCATCTTGCACCACTGTG...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTATGCCAGAGGCCGCGCTaGTTGGTGTTCACAGGAATG +
Preference number: 2 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLCQRPR*LVFTGM
Trigger: CATTCCTGTGAACACCAAGCAGCGCGGCCTCTGGCA...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAAAGGGACCTTACTGCTaGCTTTGTGTCTCCAGCAGA +
Preference number: 2 (lower is better)
Translates to: QPAKHKFPSVQPSALSARKGPYC*LCVSSR
Trigger: TCTGCTGGAGACACAAAGCCAGCAGTAAGGTCCCTT...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAATGCCTCAGCACCCCTaGCCCAAGTTTGTTACATGT +
Preference number: 2 (lower is better)
Translates to: QPAKHKFPSVQPSALSARMPQHP*PKFVTC
Trigger: ACATGTAACAAACTTGGGCCAGGGGTGCTGAGGCAT...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCTCACCCTGCAGGCACTaGAAGCGTGTGATGCTGCCG +
Preference number: 2 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTASPCRH*KRVMLP
Trigger: CGGCAGCATCACACGCTTCCAGTGCCTGCAGGGTGA...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGGCGCTGCTTGCATGCTaGCTTCTGAGTAGGAGGGGG +
Preference number: 2 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMALLAC*LLSRRG
Trigger: CCCCCTCCTACTCAGAAGTCAGCATGCAAGCAGCGC...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATATGTGGAGGAGAAAATaGTCCCAAGGTCGTCTATTA +
Preference number: 2 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNMWRRK*SQGRLL
Trigger: TAATAGACGACCTTGGGATCATTTTCTCCTCCACAT...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGCACACACCCTCACCCTaGAGGCACTGGAAGCGTGTG +
Preference number: 2 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMHTPSP*RHWKRV
Trigger: CACACGCTTCCAGTGCCTGCAGGGTGAGGGTGTGTG...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAGAGCACTCAATGCAATaGCCAAGAACAATGGTCCAG +
Preference number: 2 (lower is better)
Translates to: QPAKHKFPSVQPSALSAREHSMQ*PRTMVQ
Trigger: CTGGACCATTGTTCTTGGGCATTGCATTGAGTGCTC...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACATGCCTCAGCACCCCTaGCCCAAGTTTGTTACATGT +
Preference number: 2 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNMPQHP*PKFVTC
Trigger: ACATGTAACAAACTTGGGCCAGGGGTGCTGAGGCAT...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATCCTGTGCAGTGGGTTTaGCGGGCAGGAGCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNPVQWV*RAGASL
Trigger: CAGAGAAGCTCCTGCCCGCCAAACCCACTGCACAGG...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGACATCATAAGGAACACTaGACGGAACCTCTGTTTTAC +
Preference number: 2 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGHHKEH*TEPLFY
Trigger: GTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGATG...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAGATGTCTGGGCGTCCTaGCATGTCTTCTTCTTGGCT +
Preference number: 2 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLDVWAS*HVFFLA
Trigger: AGCCAAGAAGAAGACATGTCAGGACGCCCAGACATC...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAGTGGCCCCAACTATGTaGGGTACCTTGCAGGTGTTA +
Preference number: 2 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLVAPTM*GTLQVL
Trigger: TAACACCTGCAAGGTACCCCACATAGTTGGGGCCAC...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCTTGCATGCTGACTTCTaGGTAGGAGGGGGTCTGGAA +
Preference number: 2 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTALHADF*VGGGLE
Trigger: TTCCAGACCCCCTCCTACTCAGAAGTCAGCATGCAA...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCCCGGAAGCCCAGGAATaGTGCCTTCAGAGAGAATAC +
Preference number: 2 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAPEAQE*CLQREY
Trigger: GTATTCTCTCTGAAGGCATCATTCCTGGGCTTCCGG...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGACTAAGAAACAAACTCTaGTATGTGCAGATAAGACTC +
Preference number: 2 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGLRNKL*YVQIRL
Trigger: GAGTCTTATCTGCACATAGCAGAGTTTGTTTCTTAG...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAATTCCCTTTGATGAGTaGAGATATTTAATGCTCTCC +
Preference number: 2 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGIPFDE*RYLMLS
Trigger: GGAGAGCATTAAATATCTGCACTCATCAAAGGGAAT...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGAAGAGAGGAGCTGCTTaGCTCTGTGCCACACACCCT +
Preference number: 2 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMKRGAA*LCATHP
Trigger: AGGGTGTGTGGCACAGAGGCAAGCAGCTCCTCTCTT...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGACATCATAAGGAACACTaGACGGAACCTCTGTTTTAC +
Preference number: 2 (lower is better)
Translates to: QPAKHKFPSVQPSALSARHHKEH*TEPLFY
Trigger: GTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGATG...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAGGTCCAGTCACAGGCTaGTCACATAGAACTAGTCCT +
Preference number: 2 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLGPVTG*SHRTSP
Trigger: AGGACTAGTTCTATGTGACCAGCCTGTGACTGGACC...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACATGAACACGTACTTCTaGGGCGCGTCGCACGTTCCT +
Preference number: 2 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNMNTYF*GASHVP
Trigger: AGGAACGTGCGACGCGCCTCAGAAGTACGTGTTCAT...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTAAGCAGTCCTCCCCATaGCTCAGCACCCCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIKQSSP*LSTPGP
Trigger: TGGGCCAGGGGTGCTGAGGCATGGGGAGGACTGCTT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATAGACATTTTCCTCCCTaGAGGCATCGGGAGACAGCA +
Preference number: 2 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNRHFPP*RHRETA
Trigger: TGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCT...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAAAGCTACTCTCCGTTTaGCTACTGTTGGCACAGGAT +
Preference number: 2 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLKLLSV*LLLAQD
Trigger: ATCCTGTGCCAACAGTAGGCAAACGGAGAGTAGCTT...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCATGCCTCAGCACCCCTaGCCCAAGTTTGTTACATGT +
Preference number: 2 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAMPQHP*PKFVTC
Trigger: ACATGTAACAAACTTGGGCCAGGGGTGCTGAGGCAT...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR CAA 90 bp TCGCCCCTTTACCACACTCTGCCATTTGCCTTCTCCTTTGACCTTTaGAATTTGGCTCGTGATGCATTTAGCGTAACCGATTATGTAGTG +
Preference number: 2 (lower is better)
Translates to: SPLYHTLPFAFSFDL*NLARDAFSVTDYVV
Trigger: CACTACATAATCGGTTACGCTAAATGCATCACGAGCCAAATTCAAAAGGTCAAAGGAGAAGGCAAATGGCAGAGTGTGGTAAAGGGGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACTACTATCCACACTATTaGGCCAAACATTACCTCCTA +
Preference number: 2 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNYYPHY*AKHYLL
Trigger: TAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTA...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACGAGCAAGCAGGCATTTaGAAAAGTCTTCTAGCATTT +
Preference number: 2 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNEQAGI*KSLLAF
Trigger: AAATGCTAGAAGACTTTTTCAAATGCCTGCTTGCTC...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTATTGCATGCTGACTTCTaGGTAGGAGGGGGTCTGGAA +
Preference number: 2 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLLHADF*VGGGLE
Trigger: TTCCAGACCCCCTCCTACTCAGAAGTCAGCATGCAA...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTACCGGAAGCCCAGGAATaGTGCCTTCAGAGAGAATAC +
Preference number: 2 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLPEAQE*CLQREY
Trigger: GTATTCTCTCTGAAGGCATCATTCCTGGGCTTCCGG...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAGAACAAGCATCAAAATaGAAGACAGGTATATGTGAC +
Preference number: 2 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSEQASK*KTGICD
Trigger: GTCACATATACCTGTCTTTCATTTTGATGCTTGTTC...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCCTATGTGGGGTACCTTaGAGGTGTTACCTTCTAATA +
Preference number: 2 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSLCGVP*RCYLLI
Trigger: TATTAGAAGGTAACACCTGCAAGGTACCCCACATAG...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACAGACATTTTCCTCCCTaGAGGCATCGGGAGACAGCA +
Preference number: 2 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNRHFPP*RHRETA
Trigger: TGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCT...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTGGGCAGGAGCTTCTCTaGTTCCTGCCTGCCACAGTG +
Preference number: 2 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIGQELL*FLPATV
Trigger: CACTGTGGCAGGCAGGAAGCAGAGAAGCTCCTGCCC...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACATAACGGGTCGTGTGTaGCTAGAAGACGGCACAGTG +
Preference number: 2 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNITGRV*LEDGTV
Trigger: CACTGTGCCGTCTTCTAGGCACACACGACCCGTTAT...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAATAACGGGTCGTGTGTaGCTAGAAGACGGCACAGTG +
Preference number: 2 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLITGRV*LEDGTV
Trigger: CACTGTGCCGTCTTCTAGGCACACACGACCCGTTAT...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGAAGGGACCTTACTGCTaGCTTTGTGTCTCCAGCAGA +
Preference number: 2 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMKGPYC*LCVSSR
Trigger: TCTGCTGGAGACACAAAGCCAGCAGTAAGGTCCCTT...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACAATGGAAGTCTCCCATaGTCCCATGTTTACAAACAT +
Preference number: 2 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNNGSLP*SHVYKH
Trigger: ATGTTTGTAAACATGGGACCATGGGAGACTTCCATT...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCTTAAAAAGGAGAATCTaGTACCAGCAGCAGCCACCT +
Preference number: 2 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTALKRRI*YQQQPP
Trigger: AGGTGGCTGCTGCTGGTATCAGATTCTCCTTTTTAA...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGAGATGGTGGAGAGGTaGAAGGGTAAATCAGCCATA +
Preference number: 2 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNEMVER*KGKSAI
Trigger: TATGGCTGATTTACCCTTTCACCTCTCCACCATCTC...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCCACATGCAAAACTGCTaGCAGATGATCAACATTTGC +
Preference number: 2 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAHMQNC*QMINIC
Trigger: GCAAATGTTGATCATCTGTCAGCAGTTTTGCATGTG...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCGAGCAAGCAGGCATTTaGAAAAGTCTTCTAGCATTT +
Preference number: 2 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAEQAGI*KSLLAF
Trigger: AAATGCTAGAAGACTTTTTCAAATGCCTGCTTGCTC...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTATCATACAACGAGGACTaGGTTACCCACAGAGATGAT +
Preference number: 2 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLSYNED*VTHRDD
Trigger: ATCATCTCTGTGGGTAACCCAGTCCTCGTTGTATGA...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CAA 90 bp CTTTACCACACTCTGCCATTTGCCTTCTCCTTTGACCTTTTGAATTaGGCTCGTGATGCATTTAGCGTAACCGATTATGTAGTGAGAAAA +
Preference number: 2 (lower is better)
Translates to: LYHTLPFAFSFDLLN*ARDAFSVTDYVVRK
Trigger: TTTTCTCACTACATAATCGGTTACGCTAAATGCATCACGAGCCAAATTCAAAAGGTCAAAGGAGAAGGCAAATGGCAGAGTGTGGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTACACATGCAAAACTGCTaGCAGATGATCAACATTTGC +
Preference number: 2 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLHMQNC*QMINIC
Trigger: GCAAATGTTGATCATCTGTCAGCAGTTTTGCATGTG...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCCTAAGAAACAAACTCTaGTATGTGCAGATAAGACTC +
Preference number: 2 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTALRNKL*YVQIRL
Trigger: GAGTCTTATCTGCACATAGCAGAGTTTGTTTCTTAG...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTAAGGGACCTTACTGCTaGCTTTGTGTCTCCAGCAGA +
Preference number: 2 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIKGPYC*LCVSSR
Trigger: TCTGCTGGAGACACAAAGCCAGCAGTAAGGTCCCTT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTACAAGATGATTCCAGATaGATTGATCTAAATGTAGGA +
Preference number: 2 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLQDDSR*IDLNVG
Trigger: TCCTACATTTAGATCAATCCATCTGGAATCATCTTG...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAAATGAAAGATCTTTTTaGTCAGCATATACCTCTCAG +
Preference number: 2 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLNERSF*SAYTSQ
Trigger: CTGAGAGGTATATGCTGACCAAAAAGATCTTTCATT...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAGAGCAAGCAGGCATTTaGAAAAGTCTTCTAGCATTT +
Preference number: 2 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLEQAGI*KSLLAF
Trigger: AAATGCTAGAAGACTTTTTCAAATGCCTGCTTGCTC...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR TCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTTTGACATGCCACATCTaGGGCCCTACATTAACATCT +
Preference number: 2 (lower is better)
Translates to: SICQVLQFYGDPLHRAKILTCHI*GPTLTS
Trigger: AGATGTTAATGTAGGGCCTCAGATGTGGCATGTCAA...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACATTCCCTTTGATGAGTaGAGATATTTAATGCTCTCC +
Preference number: 2 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNIPFDE*RYLMLS
Trigger: GGAGAGCATTAAATATCTGCACTCATCAAAGGGAAT...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR GCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTCTATGTGGGGTACCTTaGAGGTGTTACCTTCTAATA +
Preference number: 2 (lower is better)
Translates to: SICQVLQFYGDPLHRAKILCGVP*RCYLLI
Trigger: TATTAGAAGGTAACACCTGCAAGGTACCCCACATAG...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACCAAGATGATTCCAGATaGATTGATCTAAATGTAGGA +
Preference number: 2 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNQDDSR*IDLNVG
Trigger: TCCTACATTTAGATCAATCCATCTGGAATCATCTTG...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR GCA 72 bp CCAGCCCCTCGTCGTGGGCACGCAGCCACACCACCATaGCCACAAGGACATGGCTGTCCCATATGTCCCACC +
Preference number: 3 (lower is better)
Translates to: PAPRRGHAATPP*PQGHGCPICPT
Trigger: GGTGGGACATATGGGACAGCCATGTCCTTGTGGGCATGGTGGTGTGGCTGCGTGCCCACGACGAGGGGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR TCA 72 bp GCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTaGCTTCTGAGTAGGAGGGGGTCTGGAAGGTCATCC +
Preference number: 3 (lower is better)
Translates to: AGIGRQQALLAC*LLSRRGSGRSS
Trigger: GGATGACCTTCCAGACCCCCTCCTACTCAGAAGTCAGCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR GCA 72 bp ATCACTGCCACCCCTGCAGGTTCCACAGGGAGCGTGTaGTTCTGGGCTGGGGTTCCTTCTGTGCACAGCAGA +
Preference number: 3 (lower is better)
Translates to: ITATPAGSTGSV*FWAGVPSVHSR
Trigger: TCTGCTGTGCACAGAAGGAACCCCAGCCCAGAAGCACACGCTCCCTGTGGAACCTGCAGGGGTGGCAGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR GCA 72 bp CCACAGTTAGCGTCAGCAGGGCATCAGGAGGTCAGTTaGAGCCAGGGCCACTATTGGGAGCAGACAGCCTGC +
Preference number: 3 (lower is better)
Translates to: PQLASAGHQEVS*SQGHYWEQTAC
Trigger: GCAGGCTGTCTGCTCCCAATAGTGGCCCTGGCTGCAACTGACCTCCTGATGCCCTGCTGACGCTAACTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 72 bp TCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTaGGACCTGGTCTGTGTGCTCCCAAAGTCCGTGCTC +
Preference number: 3 (lower is better)
Translates to: SESPASQGQNQD*DLVCVLPKSVL
Trigger: GAGCACGGACTTTGGGAGCACACAGACCAGGTCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR TCA 72 bp TCGGGAGACAGCAGGCGCTGCTTGCATGCTGACTTCTaGGTAGGAGGGGGTCTGGAAGGTCATCCAGTTCCA +
Preference number: 3 (lower is better)
Translates to: SGDSRRCLHADF*VGGGLEGHPVP
Trigger: TGGAACTGGATGACCTTCCAGACCCCCTCCTACTCAGAAGTCAGCATGCAAGCAGCGCCTGCTGTCTCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR CCA 72 bp CAGCTCCTCTTACCTTCCTCCAGCGCAAAGCCTCCCTaGGACAACTCCCCTAGATCTGGGCAGCCAGATTGT +
Preference number: 3 (lower is better)
Translates to: QLLLPSSSAKPP*DNSPRSGQPDC
Trigger: ACAATCTGGCTGCCCAGATCTAGGGGAGTTGTCCCAGGGAGGCTTTGCGCTGGAGGAAGGTAAGAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 72 bp CAAGCTACTCTCCGTTTGCCTACTGTTGGCACAGGATaGGGGGTGGAATCGTATGGAGGGTGCAGCCTCAGG +
Preference number: 3 (lower is better)
Translates to: QATLRLPTVGTG*GVESYGGCSLR
Trigger: CCTGAGGCTGCACCCTCCATACGATTCCACCCCCCATCCTGTGCCAACAGTAGGCAAACGGAGAGTAGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR GCA 72 bp CAGGGAGCGTGTGCTTCTGGGCTGGGGTTCCTTCTGTaGACAGCAGAGCAGTGCCCTCACTATAACTTACAG +
Preference number: 3 (lower is better)
Translates to: QGACASGLGFLL*TAEQCPHYNLQ
Trigger: CTGTAAGTTATAGTGAGGGCACTGCTCTGCTGTGCACAGAAGGAACCCCAGCCCAGAAGCACACGCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAACCTTACTGCTGGCTTaGTGTCTCCAGCAGACTCCC +
Preference number: 3 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARTLLLA*CLQQTP
Trigger: GGGAGTCTGCTGGAGACACAAAGCCAGCAGTAAGGT...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR GCA 72 bp TTTGTCCATCTCCAAATGCAGAGTTCTGTGAGGGCCTaGCTGCCAGGAGGAACTGCTGGTCTTGGAAGAGCC +
Preference number: 3 (lower is better)
Translates to: FVHLQMQSSVRA*LPGGTAGLGRA
Trigger: GGCTCTTCCAAGACCAGCAGTTCCTCCTGGCAGGCAGGCCCTCACAGAACTCTGCATTTGGAGATGGACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR GCA 72 bp ACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTaGCAGAGGCCGCGCTGCTTGGTGTTCACAGGAATG +
Preference number: 3 (lower is better)
Translates to: TQVSICTTQRSL*QRPRCLVFTGM
Trigger: CATTCCTGTGAACACCAAGCAGCGCGGCCTCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATACAGTGAACTCAGCTTaGAGGGAGCAGCAGAGAGCT +
Preference number: 3 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNTVNSA*REQQRA
Trigger: AGCTCTCTGCTGCTCCCTCAAAGCTGAGTTCACTGT...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 72 bp ACTGCTGGTCTTGGAAGAGCCATCCCAGGAACACGATaGCATGTGAGGCCAGTTCCTTCTGTCCATGTGTTC +
Preference number: 3 (lower is better)
Translates to: TAGLGRAIPGTR*HVRPVPSVHVF
Trigger: GAACACATGGACAGAAGGAACTGGCCTCACATGCCATCGTGTTCCTGGGATGGCTCTTCCAAGACCAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 72 bp GCAAAGACAGGGTTCCAGTGGAGGGAATCTAGAGTATaGGTGTTTTCAGGCTACACCCTGGGAACCCTGTCG +
Preference number: 3 (lower is better)
Translates to: AKTGFQWRESRV*VFSGYTLGTLS
Trigger: CGACAGGGTTCCCAGGGTGTAGCCTGAAAACACCCATACTCTAGATTCCCTCCACTGGAACCCTGTCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 72 bp GGTCCAGATCCGAGGGGACTGATACAGACCAGGCCTTaGGGTGCATGGATGGAAATTATGGGATGGTTCTCA +
Preference number: 3 (lower is better)
Translates to: GPDPRGLIQTRP*GAWMEIMGWFS
Trigger: TGAGAACCATCCCATAATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAACCTTACTGCTGGCTTaGTGTCTCCAGCAGACTCCC +
Preference number: 3 (lower is better)
Translates to: QPAKHKFPSVQPSALSARTLLLA*CLQQTP
Trigger: GGGAGTCTGCTGGAGACACAAAGCCAGCAGTAAGGT...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCACCCCTGGCCCAAGTTaGTTACATGTTTCTAAAGGA +
Preference number: 3 (lower is better)
Translates to: LHRHFPPCRHRETAGAACTPGPS*LHVSKG
Trigger: TCCTTTAGAAACATGTAACAAACTTGGGCCAGGGGT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR GCA 72 bp CTTCAGAGAACAGGAGACAGGCTAAAGGGACCTTACTaGTGGCTTTGTGTCTCCAGCAGACTCCCTGTTCTG +
Preference number: 3 (lower is better)
Translates to: LQRTGDRLKGPY*WLCVSSRLPVL
Trigger: CAGAACAGGGAGTCTGCTGGAGACACAAAGCCAGCAGTAAGGTCCCTTTAGCCTGTCTCCTGTTCTCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR GCA 72 bp TGTACAACCCAGCGCTCTCTCTGCCAGAGGCCGCGCTaGTTGGTGTTCACAGGAATGAAAGATCTTTTTGGT +
Preference number: 3 (lower is better)
Translates to: CTTQRSLCQRPR*LVFTGMKDLFG
Trigger: ACCAAAAAGATCTTTCATTCCTGTGAACACCAAGCAGCGCGGCCTCTGGCAGAGAGAGCGCTGGGTTGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCTTACTATCCACACTATaGAGCCAAACATTACCTCCT +
Preference number: 3 (lower is better)
Translates to: LHRHFPPCRHRETAGAACLLSTL*SQTLPP
Trigger: AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAA...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAACCCCTGGCCCAAGTTaGTTACATGTTTCTAAAGGA +
Preference number: 3 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARTPGPS*LHVSKG
Trigger: TCCTTTAGAAACATGTAACAAACTTGGGCCAGGGGT...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTATGTCCACGGTGCTGGTaGGTACCCACAGTTAGCGTC +
Preference number: 3 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLCPRCW*VPTVSV
Trigger: GACGCTAACTGTGGGTACCAACCAGCACCGTGGACA...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR TCA 72 bp AAAAGTCATCATTTGGCCACCAGACAAATCGTAGACTaGTCCTGGGGCCGATGTCCACGGTGCTGGTTGGTA +
Preference number: 3 (lower is better)
Translates to: KSHHLATRQIVD*SWGRCPRCWLV
Trigger: TACCAACCAGCACCGTGGACATCGGCCCCAGGATCAGTCTACGATTTGTCTGGTGGCCAAATGATGACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR TCA 72 bp TTAGCTCCTTCACAGCGGGCATTACACTTGCTCTTGTaGATACAGAGGGGACTGACAGTGGACAGGACATGC +
Preference number: 3 (lower is better)
Translates to: LAPSQRALHLLL*IQRGLTVDRTC
Trigger: GCATGTCCTGTCCACTGTCAGTCCCCTCTGTATTCACAAGAGCAAGTGTAATGCCCGCTGTGAAGGAGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR GCA 72 bp AGAGGAATTTTTCCAAGGGAGATAACGGGTCGTGTGTaGCTAGAAGACGGCACAGTGGTGCAAGATGCAGTC +
Preference number: 3 (lower is better)
Translates to: RGIFPREITGRV*LEDGTVVQDAV
Trigger: GACTGCATCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGAAAAATTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR GCA 72 bp AGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTaGATGGATGGAAATTATGGGATGGTTCTCAAGAGA +
Preference number: 3 (lower is better)
Translates to: RSEGTDTDQALG*MDGNYGMVLKR
Trigger: TCTCTTGAGAACCATCCCATAATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 72 bp CCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATaGATGGAAATTATGGGATGGTTCTCAAGAGATACA +
Preference number: 3 (lower is better)
Translates to: PRGLIQTRPWGA*MEIMGWFSRDT
Trigger: TGTATCTCTTGAGAACCATCCCATAATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAACCTTACTGCTGGCTTaGTGTCTCCAGCAGACTCCC +
Preference number: 3 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLTLLLA*CLQQTP
Trigger: GGGAGTCTGCTGGAGACACAAAGCCAGCAGTAAGGT...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAAAGTGGAACTGCATTTaGACAAGTCATACAACGAGG +
Preference number: 3 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARKWNCI*TSHTTR
Trigger: CCTCGTTGTATGACTTGTCAAAATGCAGTTCCACTT...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR TCA 72 bp GAACACGTACTTCTGAGGCGCGTCGCACGTTCCTTATaGGGAAGGTACTGTTGTTGTCCACACTTTGCACAT +
Preference number: 3 (lower is better)
Translates to: EHVLLRRVARSL*GRYCCCPHFAH
Trigger: ATGTGCAAAGTGTGGACAACAACAGTACCTTCCTCATAAGGAACGTGCGACGCGCCTCAGAAGTACGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR TCA 72 bp GTTCAGTGGCTGATTGATGGGATGTGGAGGAGAAAATaGTCCCAAGGTCGTCTATTAGAGGGAGACTCAGCC +
Preference number: 3 (lower is better)
Translates to: VQWLIDGMWRRK*SQGRLLEGDSA
Trigger: GGCTGAGTCTCCCTCTAATAGACGACCTTGGGATCATTTTCTCCTCCACATCCCATCAATCAGCCACTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR GCA 72 bp ACAAACATGTATTCAGCACCCGAGCACTCAATGCAATaGCCAAGAACAATGGTCCAGTCACAGGCTGGTCAC +
Preference number: 3 (lower is better)
Translates to: TNMYSAPEHSMQ*PRTMVQSQAGH
Trigger: GTGACCAGCCTGTGACTGGACCATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR CCA 72 bp GTTTTCAGGCTACACCCTGGGAACCCTGTCGTAGCCTaGAGGGCAACAGCTAATAAAAACAAGACCAAGCTA +
Preference number: 3 (lower is better)
Translates to: VFRLHPGNPVVA*RATANKNKTKL
Trigger: TAGCTTGGTCTTGTTTTTATTAGCTGTTGCCCTCCAGGCTACGACAGGGTTCCCAGGGTGTAGCCTGAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 72 bp TACAGACCAGGCCTTGGGGTGCATGGATGGAAATTATaGGATGGTTCTCAAGAGATACAGGTTCAGTGGCTG +
Preference number: 3 (lower is better)
Translates to: YRPGLGVHGWKL*DGSQEIQVQWL
Trigger: CAGCCACTGAACCTGTATCTCTTGAGAACCATCCCATAATTTCCATCCATGCACCCCAAGGCCTGGTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGATTACTATCCACACTATaGAGCCAAACATTACCTCCT +
Preference number: 3 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGLLSTL*SQTLPP
Trigger: AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAA...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAGCTTGGCAAATACAATaGTGTAGGGACAAAACTGTA +
Preference number: 3 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARAWQIQ*CRDKTV
Trigger: TACAGTTTTGTCCCTACACAATTGTATTTGCCAAGC...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR TCA 72 bp AGGACATGGCTGTCCCATATGTCCCACCTTCCATGGTaGAGCCAGGACTCCATTTCAGAACAAGCATCAAAA +
Preference number: 3 (lower is better)
Translates to: RTWLSHMSHLPW*SQDSISEQASK
Trigger: TTTTGATGCTTGTTCTGAAATGGAGTCCTGGCTTCACCATGGAAGGTGGGACATATGGGACAGCCATGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR TCA 72 bp TCTGCCAGAGGCCGCGCTGCTTGGTGTTCACAGGAATaGAAGATCTTTTTGGTCAGCATATACCTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: SARGRAAWCSQE*KIFLVSIYLSE
Trigger: TTCTGAGAGGTATATGCTGACCAAAAAGATCTTTCATTCCTGTGAACACCAAGCAGCGCGGCCTCTGGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR TCA 72 bp GGATGGTTCTCAAGAGATACAGGTTCAGTGGCTGATTaGTGGGATGTGGAGGAGAAAATGATCCCAAGGTCG +
Preference number: 3 (lower is better)
Translates to: GWFSRDTGSVAD*WDVEEKMIPRS
Trigger: CGACCTTGGGATCATTTTCTCCTCCACATCCCATCAATCAGCCACTGAACCTGTATCTCTTGAGAACCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR GCA 72 bp CATCTAACACAGGCATCCTCTTTGGAGCCATGGAGATaGAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTT +
Preference number: 3 (lower is better)
Translates to: HLTQASSLEPWR*KCVSYPVCSAF
Trigger: AAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCTCCAAAGAGGATGCCTGTGTTAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CCA 72 bp TACATCCATCTAACACAGGCATCCTCTTTGGAGCCATaGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCA +
Preference number: 3 (lower is better)
Translates to: YIHLTQASSLEP*RCKCVSYPVCS
Trigger: TGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCTCCAAAGAGGATGCCTGTGTTAGATGGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCACAGTGAACTCAGCTTaGAGGGAGCAGCAGAGAGCT +
Preference number: 3 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTATVNSA*REQQRA
Trigger: AGCTCTCTGCTGCTCCCTCAAAGCTGAGTTCACTGT...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACTTAACCTCAACGCTGTaGCCCCTCTGCTTCAAATTA +
Preference number: 3 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNLTSTL*PLCFKL
Trigger: TAATTTGAAGCAGAGGGGCAACAGCGTTGAGGTTAA...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAAAGTGGAACTGCATTTaGACAAGTCATACAACGAGG +
Preference number: 3 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSKWNCI*TSHTTR
Trigger: CCTCGTTGTATGACTTGTCAAAATGCAGTTCCACTT...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR TCA 72 bp CATACAACGAGGACTGGGTTACCCACAGAGATGATGTaGTCCATGTTCACAGACGGGAAGGTAACAACAATG +
Preference number: 3 (lower is better)
Translates to: HTTRTGLPTEMM*SMFTDGKVTTM
Trigger: CATTGTTGTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTCCTCGTTGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR GCA 72 bp TGTTTACAAACATGTATTCAGCACCCGAGCACTCAATaGAATGCCCAAGAACAATGGTCCAGTCACAGGCTG +
Preference number: 3 (lower is better)
Translates to: CLQTCIQHPSTQ*NAQEQWSSHRL
Trigger: CAGCCTGTGACTGGACCATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR CCA 72 bp GTGGAACTGCATTTTGACAAGTCATACAACGAGGACTaGGTTACCCACAGAGATGATGTGATCCATGTTCAC +
Preference number: 3 (lower is better)
Translates to: VELHFDKSYNED*VTHRDDVIHVH
Trigger: GTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTCCTCGTTGTATGACTTGTCAAAATGCAGTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACTCAGACAAACCTAGCTaGATTCATGTAGGTAACTAT +
Preference number: 3 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNSDKPS*IHVGNY
Trigger: ATAGTTACCTACATGAATCAAGCTAGGTTTGTCTGA...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR CCA 72 bp AATGCAATGCCCAAGAACAATGGTCCAGTCACAGGCTaGTCACATAGAACTAGTCCTCCTAATAGGATGAAT +
Preference number: 3 (lower is better)
Translates to: NAMPKNNGPVTG*SHRTSPPNRMN
Trigger: ATTCATCCTATTAGGAGGACTAGTTCTATGTGACCAGCCTGTGACTGGACCATTGTTCTTGGGCATTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGACTATGTGGGGTACCTaGCAGGTGTTACCTTCTAAT +
Preference number: 3 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMTMWGT*QVLPSN
Trigger: ATTAGAAGGTAACACCTGCAAGGTACCCCACATAGT...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAGATTACTTCCTACTTTaGGAAATAACCAGGGTCTCT +
Preference number: 3 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLDYFLL*EITRVS
Trigger: AGAGACCCTGGTTATTTCCAAAAGTAGGAAGTAATC...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTATCAGACAAACCTAGCTaGATTCATGTAGGTAACTAT +
Preference number: 3 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLSDKPS*IHVGNY
Trigger: ATAGTTACCTACATGAATCAAGCTAGGTTTGTCTGA...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTACAGTGAACTCAGCTTaGAGGGAGCAGCAGAGAGCT +
Preference number: 3 (lower is better)
Translates to: SICQVLQFYGDPLHRAKITVNSA*REQQRA
Trigger: AGCTCTCTGCTGCTCCCTCAAAGCTGAGTTCACTGT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTATTAACCTCAACGCTGTaGCCCCTCTGCTTCAAATTA +
Preference number: 3 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLLTSTL*PLCFKL
Trigger: TAATTTGAAGCAGAGGGGCAACAGCGTTGAGGTTAA...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACATGAGGAAGGTACTGTaGTTGTCCACACTTTGCACA +
Preference number: 3 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNMRKVL*LSTLCT
Trigger: TGTGCAAAGTGTGGACAACAACAGTACCTTCCTCAT...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAGCTTGGCAAATACAATaGTGTAGGGACAAAACTGTA +
Preference number: 3 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLAWQIQ*CRDKTV
Trigger: TACAGTTTTGTCCCTACACAATTGTATTTGCCAAGC...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR-3UTR CAA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTACCCCTGGCCCAAGTTaGTTACATGTTTCTAAAGGA +
Preference number: 3 (lower is better)
Translates to: SICQVLQFYGDPLHRAKITPGPS*LHVSKG
Trigger: TCCTTTAGAAACATGTAACAAACTTGGGCCAGGGGT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR TCA 72 bp TCATATAAAGGTGTCACATGCAAAACTGCTGACAGATaGTCAACATTTGCTATATTCCCTTTGATGAGTGCA +
Preference number: 3 (lower is better)
Translates to: SYKGVTCKTADR*STFAIFPLMSA
Trigger: TGCACTCATCAAAGGGAATATAGCAAATGTTGATCATCTGTCAGCAGTTTTGCATGTGACACCTTTATATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGTCCAGCCCCTCGTCGTaGGCACGCAGCCACACCACC +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGSSPSS*ARSHTT
Trigger: GGTGGTGTGGCTGCGTGCCCACGACGAGGGGCTGGA...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCAGGTGCTGGTCCTCCTaGCCCGGCCCACGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACRCWSS*PGPRSP
Trigger: CGGGCTCCGTGGGCCGGGGCAGGAGGACCAGCACCT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCCCCGGCCTCAGGTGCTaGTCCTCCTGCCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACPGLRC*SSCPGP
Trigger: TGGGCCGGGGCAGGAGGACCAGCACCTGAGGCCGGG...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGAGCAGGCTCTCGAACTaGGCCAGCAGCCCGATGGTG +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGSRLSN*ASSPMV
Trigger: CACCATCGGGCTGCTGGCCCAGTTCGAGAGCCTGCT...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGAGCAGCATGCCACTCTaGATCTCCCGGGGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGSSMPL*ISRGKA
Trigger: CGCCTTGCCCCGGGAGATCCAGAGTGGCATGCTGCT...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAAGGTGCTGGTCCTCCTaGCCCGGCCCACGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARRCWSS*PGPRSP
Trigger: CGGGCTCCGTGGGCCGGGGCAGGAGGACCAGCACCT...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGTCCACAGGGAGCGTGTaGTTCTGGGCTGGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGSTGSV*FWAGVP
Trigger: AGGAACCCCAGCCCAGAAGCACACGCTCCCTGTGGA...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGACCCGGCCTCAGGTGCTaGTCCTCCTGCCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGPGLRC*SSCPGP
Trigger: TGGGCCGGGGCAGGAGGACCAGCACCTGAGGCCGGG...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCTGGCCACGCAGTCGGTaGGAGTGGTCAGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACWPRSR*EWSAAG
Trigger: ACCCGCTGCTGACCACTCTCACCGACTGCGTGGCCA...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTGGCCACGCAGTCGGTaGGAGTGGTCAGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACWPRSR*EWSAAG
Trigger: ACCCGCTGCTGACCACTCTCACCGACTGCGTGGCCA...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCTCTGGCAGGCACGTCTaGCTGCGAGACCGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACSGRHV*LRDRGR
Trigger: CCTGCCTCGGTCTCGCAGTCAGACGTGCCTGCCAGA...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGATGTGAAGTCGCGGGCTaGGGGCCCGGCCTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGCEVAG*GPGLRC
Trigger: GCACCTGAGGCCGGGCCCGCAGCCCGCGACTTCACA...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCGGAAGCCCGCTGCATTaGACGGGCCCTGGCACCATG +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACGSPLH*TGPGTM
Trigger: CATGGTGCCAGGGCCCGTGCAATGCAGCGGGCTTCC...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGGTGGGCGCGCTGTCCTaGATGAGCAGGAATACCATG +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGVGALS*MSRNTM
Trigger: CATGGTATTCCTGCTCATGCAGGACAGCGCGCCCAC...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCGCCTGGGTGAAGACCTaGGGGGCCATGCCATGCTCG +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACAWVKT*GAMPCS
Trigger: CGAGCATGGCATGGCCCCGCAGGTCTTCACCCAGGC...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCGCATTGCACGGGCCCTaGCACCATGGCGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACALHGP*HHGEGC
Trigger: ACAGCCCTCGCCATGGTGCCAGGGCCCGTGCAATGC...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGGTCACAGGGGGCCGTTaGTCTGACTTCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGVTGGR*SDFSSI
Trigger: GATGGAGGAGAAGTCAGACCAACGGCCCCCTGTGAC...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGTCCATTCACCTGGGCTaGACTCTTCAGGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGSIHLG*TLQEGD
Trigger: GTCCCCCTCCTGAAGAGTCCAGCCCAGGTGAATGGA...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCGGGCCAGCAGCCCGATaGTGTAGAGCTGGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACGPAAR*CRAGAG
Trigger: TCCTGCGCCAGCTCTACACCATCGGGCTGCTGGCCC...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCACTCCAGGGCCTaGGTGAAGACCTGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACMHSRA*VKTCGA
Trigger: GGCCCCGCAGGTCTTCACCCAGGCCCTGGAGTGCAT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGCTGGCGCCCCAATGGTaGCGATGTCGTAGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGLAPQW*RCRSSD
Trigger: ATCAGAACTACGACATCGTCACCATTGGGGCGCCAG...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCCGGGCATGCACGTTCTaGCCCAGAAACCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACRACTF*PRNRSS
Trigger: GCTGCTGCGGTTTCTGGGTCAGAACGTGCATGCCCG...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGATGTGTCCTCTGGGCGTaGGGGAGCCTCGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGCVLWA*GSLGRE
Trigger: CTCCCTGCCGAGGCTCCCTCACGCCCAGAGGACACA...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGGTGGAAGCCCGCTaGATTGCACGGGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACMVEAR*IARALA
Trigger: TGCCAGGGCCCGTGCAATGCAGCGGGCTTCCACCAT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCAGGAGCTTCACGAACTaGCGGGGCACGTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACRSFTN*RGTCRE
Trigger: CTCCCTGCACGTGCCCCGGCAGTTCGTGAAGCTCCT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCAAGCAGTCCTCCCCATaGCTCAGCACCCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACKQSSP*LSTPGP
Trigger: TGGGCCAGGGGTGCTGAGGCATGGGGAGGACTGCTT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCCCGCCACGTCGATGGTaGAAGCCCGCTGCATTGCAC +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACPPRRW*KPAALH
Trigger: GTGCAATGCAGCGGGCTTCCACCATCGACGTGGCGG...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCGAGGATGGCATGCAGTaGAGGGCATGGTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACEDGMQ*RAWWRG
Trigger: GCCCCTCCACCATGCCCTCCACTGCATGCCATCCTC...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000074304.9
ENST00000409851.8
CDS-3UTR CCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCAGGGCGGTCAGCGTCTaGCAGAAGACCACGTCACGG +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACRAVSV*QKTTSR
Trigger: CCGTGACGTGGTCTTCTGCCAGACGCTGACCGCCCT...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCAGCAGCATGCCACTCTaGATCTCCCGGGGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACSSMPL*ISRGKA
Trigger: CGCCTTGCCCCGGGAGATCCAGAGTGGCATGCTGCT...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCCAGCCACCTGTGCAGTaGGTTTGGCGGGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACQPPVQ*VWRAGA
Trigger: AGCTCCTGCCCGCCAAACCCACTGCACAGGTGGCTG...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGTTGCATGCTGACTTCTaGGTAGGAGGGGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGLHADF*VGGGLE
Trigger: TTCCAGACCCCCTCCTACTCAGAAGTCAGCATGCAA...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAGGCACTGGAAGCGTGTaGTGCTGCCGGAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARGTGSV*CCRKPR
Trigger: CCTGGGCTTCCGGCAGCATCACACGCTTCCAGTGCC...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATGGCACTGGAAGCGTGTaGTGCTGCCGGAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNGTGSV*CCRKPR
Trigger: CCTGGGCTTCCGGCAGCATCACACGCTTCCAGTGCC...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAGGAAGCCCGCTGCATTaGACGGGCCCTGGCACCATG +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARGSPLH*TGPGTM
Trigger: CATGGTGCCAGGGCCCGTGCAATGCAGCGGGCTTCC...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTGCAGCCGCTCCTTCTaGAGCAGCTTGTCCACACGC +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACCSRSF*SSLSTR
Trigger: GCGTGTGGACAAGCTGCTGCAGAAGGAGCGGCTGCA...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCAGACCTGCGGGGCCATaGCATGCTCGTGTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACRPAGP*HARVAG
Trigger: TCCTGCAACACGAGCATGGCATGGCCCCGCAGGTCT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCGGGCAGGAGCTTCTCTaGTTCCTGCCTGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACGQELL*FLPATV
Trigger: CACTGTGGCAGGCAGGAAGCAGAGAAGCTCCTGCCC...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCCATCACTGCCACCCCTaGAGGTTCCACAGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACHHCHP*RFHRER
Trigger: ACGCTCCCTGTGGAACCTGCAGGGGTGGCAGTGATG...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCCATCACTGCCACCCCTaGAGGTTCCACAGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACHHCHP*RFHRER
Trigger: ACGCTCCCTGTGGAACCTGCAGGGGTGGCAGTGATG...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTTACCCGGGAAGTGCTaGCACCGAGCCCTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACLPGKC*HRALVH
Trigger: GTGGACTAGGGCTCGGTGCCAGCACTTCCCGGGTAA...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGACGGCCGCCACGTCGATaGTGGAAGCCCGCTGCATTG +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGRPPRR*WKPAAL
Trigger: CAATGCAGCGGGCTTCCACCATCGACGTGGCGGCCG...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTGGCAGACCTGTCCTTaGCTGCCCTTGACAGCCGCT +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACWQTCP*LPLTAA
Trigger: AGCGGCTGTCAAGGGCAGCCAAGGACAGGTCTGCCA...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATACACCGAGGGAGGGCTaGGTGGCGAGGAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNTPREG*VARRRK
Trigger: CTTCCTCCTCCTCGCCACCCAGCCCTCCCTCGGTGT...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTTCGTCCAGAATGCCTaGGGAGGGGTGGTGACACTC +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACFVQNA*GGVVTL
Trigger: GAGTGTCACCACCCCTCCTCAGGCATTCTGGACGAA...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAAGGAGCTTCACGAACTaGCGGGGCACGTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARRSFTN*RGTCRE
Trigger: CTCCCTGCACGTGCCCCGGCAGTTCGTGAAGCTCCT...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCCAGACCGTGACCAGCTaGCGTGTCTTGTCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACQTVTS*RVLSAK
Trigger: CTTGGCAGACAAGACACGGCAGCTGGTCACGGTCTG...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGATCACAGCCCTCGCCATaGAGCCGCTCCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARSQPSP*SRSFCS
Trigger: GCTGCAGAAGGAGCGGCTGCATGGCGAGGGCTGTGA...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCCCGGGTTACCTTTCTTaGTGGTGCAGCTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACPGYLS*WCSCLH
Trigger: GTGCAGGCAGCTGCACCAGCAAGAAAGGTAACCCGG...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000074304.9
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCCTCTCGGCCAGTGTCTaGTGCTCATTGATGCCCACG +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACLSASV*CSLMPT
Trigger: CGTGGGCATCAATGAGCAGCAGACACTGGCCGAGAG...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGCAGATCTCAGCAGCTTaGCAGAGAATGTCGACGTTC +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGQISAA*QRMSTF
Trigger: GAACGTCGACATTCTCTGGCAAGCTGCTGAGATCTG...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGCTAAAGGGACCTTACTaGTGGCTTTGTGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGLKGPY*WLCVSS
Trigger: GCTGGAGACACAAAGCCAGCAGTAAGGTCCCTTTAG...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAAAGCAGTCCTCCCCATaGCTCAGCACCCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGKQSSP*LSTPGP
Trigger: TGGGCCAGGGGTGCTGAGGCATGGGGAGGACTGCTT...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGAAAGTGGCAGTAGCCTaGACATGTTTGCTCTCGGAC +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGKVAVA*TCLLSD
Trigger: GTCCGAGAGCAAACATGTCCAGGCTACTGCCACTTT...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGACCGCCACGTCGATGGTaGAAGCCCGCTGCATTGCAC +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARPPRRW*KPAALH
Trigger: GTGCAATGCAGCGGGCTTCCACCATCGACGTGGCGG...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTACTGGGTGACAATTTaGCGCCGGAGGCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACYWVTI*RRRLSQ
Trigger: CTGGGAGAGCCTCCGGCGCCAAATTGTCACCCAGTA...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGTCGGTCAGGTTCTCCTaGTATGTGAGGATGATGGTC +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGSVRFS*YVRMMV
Trigger: GACCATCATCCTCACATACCAGGAGAACCTGACCGA...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTTGGCAGTGTGCTGCTaGCGCCCCAATGGTGACGAT +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACLAVCC*RPNGDD
Trigger: ATCGTCACCATTGGGGCGCCAGCAGCACACTGCCAA...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCCGTTCAGCCCATGGATaGAGTTGGCCAGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACRSAHG*SWPGAC
Trigger: GCAAGCTCCTGGCCAACTCCATCCATGGGCTGAACG...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGGCCATGAGGGTGTCCTaGTCATTTCTAAGCATCACC +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGAMRVS*SFLSIT
Trigger: GGTGATGCTTAGAAATGACCAGGACACCCTCATGGC...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAAGGGCGGTCAGCGTCTaGCAGAAGACCACGTCACGG +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARRAVSV*QKTTSR
Trigger: CCGTGACGTGGTCTTCTGCCAGACGCTGACCGCCCT...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAAAGACCTGCCTGGACTaGCCTGCAAGGCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGKTCLD*PARPTG
Trigger: CCCTGTGGGCCTTGCAGGCCAGTCCAGGCAGGTCTT...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGAGGCCTTGGGGTGCATaGATGGAAATTATGGGATGG +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGRPWGA*MEIMGW
Trigger: CCATCCCATAATTTCCATCCATGCACCCCAAGGCCT...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCGCCAGCCAATCACGGTaGTGTTACCTACACGGTCAC +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACASQSR*CYLHGH
Trigger: GTGACCGTGTAGGTAACATCACCGTGATTGGCTGGC...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAAGGGGGCCGTTGGTCTaGCTTCTCCTCCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARRGPLV*LLLHLP
Trigger: TGGCAGATGGAGGAGAAGTCAGACCAACGGCCCCCT...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAGTCCTTGGCTGCCCTTaGCAGCCGCTCTGCGTAGTA +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGVLGCP*QPLCVV
Trigger: TACTACGCAGAGCGGCTGTCAAGGGCAGCCAAGGAC...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGATGCAGTCGCAGACCGTaGCCAGCTGCCGTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGCSRRP*PAAVSC
Trigger: ACAAGACACGGCAGCTGGTCACGGTCTGCGACTGCA...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAGCGCGCTGTCCTGCATaGGCAGGAATACCATGGCCT +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGARCPA*AGIPWP
Trigger: AGGCCATGGTATTCCTGCTCATGCAGGACAGCGCGC...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGACAGTTCCACCCTACCTaGTGCCCACCCCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGQFHPT*CPPPLC
Trigger: ACACAGAGGGGGTGGGCATCAGGTAGGGTGGAACTG...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCGGCAGCCCTTTAGAGTaGCCAAAGAGGTCACACTGC +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACGSPLE*PKRSHC
Trigger: GCAGTGTGACCTCTTTGGTCACTCTAAAGGGCTGCC...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGACAGATCCGAGGGGACTaGTACAGACCAGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGQIRGD*YRPGLG
Trigger: CCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTG...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGAATGATCTCCGTCTGTaGATGCTTCGTCCAGAATGC +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGNDLRL*MLRPEC
Trigger: GCATTCTGGACGAAGCATGCACAGACGGAGATCATT...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCACGCTCTCTGCCATCTaGTCCAGGATCCGCAAATGG +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACTLSAI*SRIRKW
Trigger: CCATTTGCGGATCCTGGAGCAGATGGCAGAGAGCGT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAGGAGAGCACGCTCTCTaGCATCTGCTCCAGGATCCG +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGGEHAL*HLLQDP
Trigger: CGGATCCTGGAGCAGATGGCAGAGAGCGTGCTCTCC...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAACCTTGGCAGTGTGCTaGTGGCGCCCCAATGGTGAC +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGTLAVC*WRPNGD
Trigger: GTCACCATTGGGGCGCCAGCAGCACACTGCCAAGGT...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCAAAACCTTGGCAGTGTaGTGCTGGCGCCCCAATGGT +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACKTLAV*CWRPNG
Trigger: ACCATTGGGGCGCCAGCAGCACACTGCCAAGGTTTT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCCTGCCGTGTCTTGTCTaGCAAGATGGCGAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACLPCLV*QDGECP
Trigger: AGGACACTCGCCATCTTGGCAGACAAGACACGGCAG...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCCAGATGAGGATGGCATaGAGTGGAGGGCATGGTGGA +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACQMRMA*SGGHGG
Trigger: TCCACCATGCCCTCCACTGCATGCCATCCTCATCTG...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000074304.9
ENST00000409851.8
CDS-3UTR GCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCTGCAGGATCAGGCACTaGTCCAGTGTCACCGACATG +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACCRIRH*SSVTDM
Trigger: CATGTCGGTGACACTGGAGCAGTGCCTGATCCTGCA...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGACGCTGTTGCCCCTCTaGTTCAAATTAGGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGTLLPL*FKLGRN
Trigger: GTTTCTGCCTAATTTGAAGCAGAGGGGCAACAGCGT...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCGGTACATGCGGCAGATaGCACCACCGAACACCGATT +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACGTCGR*HHRTPI
Trigger: AATCGGTGTTCGGTGGTGCCATCTGCCGCATGTACC...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAGCCCATGGATGGAGTTaGCCAGGAGCTTGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGAHGWS*PGACSR
Trigger: GCGACTGCAAGCTCCTGGCCAACTCCATCCATGGGC...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGATCACCCTGCAGGCACTaGAAGCGTGTGATGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGSPCRH*KRVMLP
Trigger: CGGCAGCATCACACGCTTCCAGTGCCTGCAGGGTGA...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATGGGAGCGTGTGCTTCTaGGCTGGGGTTCCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNGSVCF*AGVPSV
Trigger: CACAGAAGGAACCCCAGCCCAGAAGCACACGCTCCC...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCGTCCACGGTGCTGGTTaGTACCCACAGTTAGCGTCA +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACVHGAG*YPQLAS
Trigger: TGACGCTAACTGTGGGTACCAACCAGCACCGTGGAC...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGAACCCTGTCGTAGCCTaGAGGGCAACAGCTAATAAA +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGNPVVA*RATANK
Trigger: TTTATTAGCTGTTGCCCTCCAGGCTACGACAGGGTT...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGACGGTCAGACCACGCCTaGTTACCCGGGAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARRSDHA*LPGKCW
Trigger: CCAGCACTTCCCGGGTAATCAGGCGTGGTCTGACCG...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCAGCTTGTCCACACGCTaGATGATGCACTCTAGGCTC +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACSLSTR*MMHSRL
Trigger: GAGCCTAGAGTGCATCATTCAGCGTGTGGACAAGCT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAGCGCTGGAAGTGGCCTaGGTGACTTTGAAGGTCACG +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGALEVA*VTLKVT
Trigger: CGTGACCTTCAAAGTCACTCAGGCCACTTCCAGCGC...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATTCCCCATGGGAGTGTTaGCATGCCACATCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNSPWEC*HATSEA
Trigger: GGCCTCAGATGTGGCATGTCAACACTCCCATGGGGA...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGATCCCCATGGGAGTGTTaGCATGCCACATCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGSPWEC*HATSEA
Trigger: GGCCTCAGATGTGGCATGTCAACACTCCCATGGGGA...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGACAGACCGTGACCAGCTaGCGTGTCTTGTCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARQTVTS*RVLSAK
Trigger: CTTGGCAGACAAGACACGGCAGCTGGTCACGGTCTG...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGACATGTCCTCCAGCATTaGCAGCTCCTCCCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARHVLQH*QLLPVG
Trigger: ACCTACGGGGAGGAGCTGGCAATGCTGGAGGACATG...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGACTCTCGGCCAGTGTCTaGTGCTCATTGATGCCCACG +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGLSASV*CSLMPT
Trigger: CGTGGGCATCAATGAGCAGCAGACACTGGCCGAGAG...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAAGCAGCAGCCACCTGTaGAGTGGGTTTGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSSSSHL*SGFGGQ
Trigger: CTGCCCGCCAAACCCACTGCACAGGTGGCTGCTGCT...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCACAGAAGAGAGGAGCTaGTTGCCTCTGTGCCACACA +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACTEERS*LPLCHT
Trigger: TGTGTGGCACAGAGGCAAGCAGCTCCTCTCTTCTGT...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAGGGACCTGGTCTGTGTaGTCCCAAAGTCCGTGCTCT +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARGTWSV*SQSPCS
Trigger: AGAGCACGGACTTTGGGAGCACACAGACCAGGTCCC...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATAACGGGTCGTGTGTaGCTAGAAGACGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACITGRV*LEDGTV
Trigger: CACTGTGCCGTCTTCTAGGCACACACGACCCGTTAT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCATAACGGGTCGTGTGTaGCTAGAAGACGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACITGRV*LEDGTV
Trigger: CACTGTGCCGTCTTCTAGGCACACACGACCCGTTAT...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCCTTCAGGAGGGGGACTaGAATCTTTCTTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACLQEGD*NLSCWC
Trigger: GCACCAGCAAGAAAGATTGCAGTCCCCCTCCTGAAG...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409016.8
CDS-3UTR GCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAGGCCGATGTCCACGGTaGTGGTTGGTACCCACAGTT +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARGRCPR*WLVPTV
Trigger: AACTGTGGGTACCAACCAGCACCGTGGACATCGGCC...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCCCCGGCCTCAGGTGCTaGTCCTCCTGCCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAPGLRC*SSCPGP
Trigger: TGGGCCGGGGCAGGAGGACCAGCACCTGAGGCCGGG...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACGCATTGCACGGGCCCTaGCACCATGGCGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNALHGP*HHGEGC
Trigger: ACAGCCCTCGCCATGGTGCCAGGGCCCGTGCAATGC...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATTACTGGGTGACAATTTaGCGCCGGAGGCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNYWVTI*RRRLSQ
Trigger: CTGGGAGAGCCTCCGGCGCCAAATTGTCACCCAGTA...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAGAGGATGGCATGCAGTaGAGGGCATGGTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSEDGMQ*RAWWRG
Trigger: GCCCCTCCACCATGCCCTCCACTGCATGCCATCCTC...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409851.8
CDS-3UTR CCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCGGGGACTGCAATGTGTaGTCAGATGAGGATGGCATG +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACGDCNV*SDEDGM
Trigger: CATGCCATCCTCATCTGACCACACATTGCAGTCCCC...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000074304.9
ENST00000409851.8
CDS-3UTR CCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAGCAGGCTCAGGTAGGTaGCTATGGTGGGCGCGCTGT +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARAGSGR*LWWARC
Trigger: ACAGCGCGCCCACCATAGCCACCTACCTGAGCCTGC...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAAGCAGGCTCTCGAACTaGGCCAGCAGCCCGATGGTG +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARSRLSN*ASSPMV
Trigger: CACCATCGGGCTGCTGGCCCAGTTCGAGAGCCTGCT...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAAGCAGCATGCCACTCTaGATCTCCCGGGGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARSSMPL*ISRGKA
Trigger: CGCCTTGCCCCGGGAGATCCAGAGTGGCATGCTGCT...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCGAGGCCTGTAATGCTTaGGGAAAGCCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACEACNA*GKPSAA
Trigger: TGCAGCTGAAGGCTTTCCCCAAGCATTACAGGCCTC...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCGTGGCCCCAACTATGTaGGGTACCTTGCAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACVAPTM*GTLQVL
Trigger: TAACACCTGCAAGGTACCCCACATAGTTGGGGCCAC...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCAGGAACTGCTGGTCTTaGAAGAGCCATCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACRNCWS*KSHPRN
Trigger: GTTCCTGGGATGGCTCTTCCAAGACCAGCAGTTCCT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGGTGAGAAAAACAGCGTaGTCCAGTGCTGAAATAGGA +
Preference number: 4 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGVRKTA*SSAEIG
Trigger: TCCTATTTCAGCACTGGACCACGCTGTTTTTCTCAC...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCTTTGCGGAGACCTCCTaGCTTAAAACCTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACFAETS*LKTLAV
Trigger: CACTGCCAAGGTTTTAAGTCAGGAGGTCTCCGCAAA...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCATGCAGTCGCAGACCGTaGCCAGCTGCCGTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSCSRRP*PAAVSC
Trigger: ACAAGACACGGCAGCTGGTCACGGTCTGCGACTGCA...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAATGAACACGTACTTCTaGGGCGCGTCGCACGTTCCT +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGMNTYF*GASHVP
Trigger: AGGAACGTGCGACGCGCCTCAGAAGTACGTGTTCAT...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCAAGGAATCAGGACACTaGAACGAGGTGCACTGCTAC +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACKESGH*NEVHCY
Trigger: GTAGCAGTGCACCTCGTTTCAGTGTCCTGATTCCTT...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAGGCAGCCCTTTAGAGTaGCCAAAGAGGTCACACTGC +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGGSPLE*PKRSHC
Trigger: GCAGTGTGACCTCTTTGGTCACTCTAAAGGGCTGCC...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATATGCTTCGTCCAGAATaGCTGAGGAGGGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNMLRPE*LRRGGD
Trigger: GTCACCACCCCTCCTCAGGCATTCTGGACGAAGCAT...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGATTGGAAACCGGTACATaGGGCAGATGGCACCACCGA +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARLETGT*GRWHHR
Trigger: TCGGTGGTGCCATCTGCCGCATGTACCGGTTTCCAA...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGACTGCCGTGTCTTGTCTaGCAAGATGGCGAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGLPCLV*QDGECP
Trigger: AGGACACTCGCCATCTTGGCAGACAAGACACGGCAG...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACTCACAGCCCTCGCCATaGAGCCGCTCCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNSQPSP*SRSFCS
Trigger: GCTGCAGAAGGAGCGGCTGCATGGCGAGGGCTGTGA...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACGCACTCGCAGCAGCATaGCACTCTGGATCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNALAAA*HSGSPG
Trigger: CCCGGGAGATCCAGAGTGGCATGCTGCTGCGAGTGC...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAGCAGGCACGTCTGACTaGGAGACCGAGGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARAGTSD*ETEAGN
Trigger: ATTGCCTGCCTCGGTCTCGCAGTCAGACGTGCCTGC...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCCAGATCTCAGCAGCTTaGCAGAGAATGTCGACGTTC +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACQISAA*QRMSTF
Trigger: GAACGTCGACATTCTCTGGCAAGCTGCTGAGATCTG...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCCTAAAGGGACCTTACTaGTGGCTTTGTGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACLKGPY*WLCVSS
Trigger: GCTGGAGACACAAAGCCAGCAGTAAGGTCCCTTTAG...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCCACCCGAGCACTCAATaGAATGCCCAAGAACAATGG +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACHPSTQ*NAQEQW
Trigger: CCATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTG...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCAGAGGTCAAGCAACTTaGTCAGAGTCACCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACRGQAT*SESPAS
Trigger: ACTGGCTGGTGACTCTGAGCAAGTTGCTTGACCTCT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAGAATCGTATGGAGGGTaGAGCCTCAGGCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARESYGG*SLRLEK
Trigger: CTTCTCCAGCCTGAGGCTGCACCCTCCATACGATTC...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACCCGCCACGTCGATGGTaGAAGCCCGCTGCATTGCAC +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNPPRRW*KPAALH
Trigger: GTGCAATGCAGCGGGCTTCCACCATCGACGTGGCGG...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCTCGGTCAGGTTCTCCTaGTATGTGAGGATGATGGTC +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACSVRFS*YVRMMV
Trigger: GACCATCATCCTCACATACCAGGAGAACCTGACCGA...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCATGGCAGACCTGTCCTTaGCTGCCCTTGACAGCCGCT +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSWQTCP*LPLTAA
Trigger: AGCGGCTGTCAAGGGCAGCCAAGGACAGGTCTGCCA...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAGCAGCGTTCAGCCCATaGATGGAGTTGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSAAFSP*MELARS
Trigger: GCTCCTGGCCAACTCCATCCATGGGCTGAACGCTGC...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCGCCATGAGGGTGTCCTaGTCATTTCTAAGCATCACC +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACAMRVS*SFLSIT
Trigger: GGTGATGCTTAGAAATGACCAGGACACCCTCATGGC...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATGGTTACCTTTCTTGCTaGTGCAGCTGCCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNGYLSC*CSCLHR
Trigger: CCTGTGCAGGCAGCTGCACCAGCAAGAAAGGTAACC...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCATGCACTCCAGGGCCTaGGTGAAGACCTGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSMHSRA*VKTCGA
Trigger: GGCCCCGCAGGTCTTCACCCAGGCCCTGGAGTGCAT...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGACCTGTGCAGTGGGTTTaGCGGGCAGGAGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARPVQWV*RAGASL
Trigger: CAGAGAAGCTCCTGCCCGCCAAACCCACTGCACAGG...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCACCTGTGCAGTGGGTTTaGCGGGCAGGAGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSPVQWV*RAGASL
Trigger: CAGAGAAGCTCCTGCCCGCCAAACCCACTGCACAGG...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACCAGCCACCTGTGCAGTaGGTTTGGCGGGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNQPPVQ*VWRAGA
Trigger: AGCTCCTGCCCGCCAAACCCACTGCACAGGTGGCTG...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAGGGAGCGTGTGCTTCTaGGCTGGGGTTCCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARGSVCF*AGVPSV
Trigger: CACAGAAGGAACCCCAGCCCAGAAGCACACGCTCCC...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGACGATGTCCACGGTGCTaGTTGGTACCCACAGTTAGC +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGRCPRC*LVPTVS
Trigger: GCTAACTGTGGGTACCAACCAGCACCGTGGACATCG...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCACACCGAGGGAGGGCTaGGTGGCGAGGAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSTPREG*VARRRK
Trigger: CTTCCTCCTCCTCGCCACCCAGCCCTCCCTCGGTGT...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGATTCGTCCAGAATGCCTaGGGAGGGGTGGTGACACTC +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARFVQNA*GGVVTL
Trigger: GAGTGTCACCACCCCTCCTCAGGCATTCTGGACGAA...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCCGGGCATGCACGTTCTaGCCCAGAAACCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSRACTF*PRNRSS
Trigger: GCTGCTGCGGTTTCTGGGTCAGAACGTGCATGCCCG...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCGAGATGGTGGAGAGGTaGAAGGGTAAATCAGCCATA +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACEMVER*KGKSAI
Trigger: TATGGCTGATTTACCCTTTCACCTCTCCACCATCTC...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATGACTCAACAGGAAACTaGAGCGCAGCACCAGAATGG +
Preference number: 4 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNDSTGN*SAAPEW
Trigger: CCATTCTGGTGCTGCGCTTCAGTTTCCTGTTGAGTC...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAAGACAAATCGTAGACTaGTCCTGGGGCCGATGTCCA +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGRQIVD*SWGRCP
Trigger: TGGACATCGGCCCCAGGATCAGTCTACGATTTGTCT...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCAATGATCTCCGTCTGTaGATGCTTCGTCCAGAATGC +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACNDLRL*MLRPEC
Trigger: GCATTCTGGACGAAGCATGCACAGACGGAGATCATT...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAGACTTCTCCTCCATCTaGCAGCCAATCACGGTGATG +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGDFSSI*QPITVM
Trigger: CATCACCGTGATTGGCTGGCAGATGGAGGAGAAGTC...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCAACTGCCGGGGCACGTaGAGGGAGAGCACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSNCRGT*RESTLS
Trigger: AGAGAGCGTGCTCTCCCTGCACGTGCCCCGGCAGTT...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGACAGACCGTGACCAGCTaGCGTGTCTTGTCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARQTVTS*RVLSAK
Trigger: CTTGGCAGACAAGACACGGCAGCTGGTCACGGTCTG...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAAATGTAGTCAGGCCGTaGAGCGTTCAGCCCATGGAT +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGNVVRP*SVQPMD
Trigger: ATCCATGGGCTGAACGCTGCACGGCCTGACTACATT...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACTGCAGCCGCTCCTTCTaGAGCAGCTTGTCCACACGC +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNCSRSF*SSLSTR
Trigger: GCGTGTGGACAAGCTGCTGCAGAAGGAGCGGCTGCA...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAAGGAAGCCGTCGTCATaGAGGCAGTTCCTCAGCTTA +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGRKPSS*RQFLSL
Trigger: TAAGCTGAGGAACTGCCTGCATGACGACGGCTTCCT...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGATTGAAGAGGACGGGCTaGACTCGCAGCAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARLKRTG*TRSSMP
Trigger: TGGCATGCTGCTGCGAGTGCAGCCCGTCCTCTTCAA...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCAAGCAGTCCTCCCCATaGCTCAGCACCCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSKQSSP*LSTPGP
Trigger: TGGGCCAGGGGTGCTGAGGCATGGGGAGGACTGCTT...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAGGGACCTGGTCTGTGTaGTCCCAAAGTCCGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSGTWSV*SQSPCS
Trigger: AGAGCACGGACTTTGGGAGCACACAGACCAGGTCCC...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCTGCACAGCAGAGCAGTaGCCTCACTATAACTTACAG +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACCTAEQ*PHYNLQ
Trigger: CTGTAAGTTATAGTGAGGGCACTGCTCTGCTGTGCA...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGACTGGGGTTCCTTCTGTaGACAGCAGAGCAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARLGFLL*TAEQCP
Trigger: AGGGCACTGCTCTGCTGTGCACAGAAGGAACCCCAG...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAGGCCGATGTCCACGGTaGTGGTTGGTACCCACAGTT +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARGRCPR*WLVPTV
Trigger: AACTGTGGGTACCAACCAGCACCGTGGACATCGGCC...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAGACCAGGCCTTGGGGTaGATGGATGGAAATTATGGG +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGDQALG*MDGNYG
Trigger: CCCATAATTTCCATCCATGCACCCCAAGGCCTGGTC...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCATCCTCTCAAGGCCAGTaGCAGACCTGTCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSSSQGQ*QTCPWL
Trigger: CAGCCAAGGACAGGTCTGCCACTGGCCTTGAGAGGA...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATACCATGGCCTTCTTaGCCTTGTCACTCATCATGG +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACIPWPS*PCHSSW
Trigger: CCATGATGAGTGACAAGGCCAAGAAGGCCATGGTAT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAGAGGCCTGTAATGCTTaGGGAAAGCCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGEACNA*GKPSAA
Trigger: TGCAGCTGAAGGCTTTCCCCAAGCATTACAGGCCTC...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAGTGGCCCCAACTATGTaGGGTACCTTGCAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGVAPTM*GTLQVL
Trigger: TAACACCTGCAAGGTACCCCACATAGTTGGGGCCAC...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAGGGCAGAACCAGGATTaGGACCTGGTCTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARGQNQD*DLVCVL
Trigger: GAGCACACAGACCAGGTCCCAATCCTGGTTCTGCCC...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTCCTCTTTGGAGCCATaGAGATGCAAGTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACSSLEP*RCKCVS
Trigger: GGAAACACACTTGCATCTCCATGGCTCCAAAGAGGA...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCATACAGACCAGGCCTTaGGGTGCATGGATGGAAATT +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACIQTRP*GAWMEI
Trigger: AATTTCCATCCATGCACCCCAAGGCCTGGTCTGTAT...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CAA 72 bp ACAACCCAGCGCTCTCTCTGCCAGAGGCCGCGCTGCTaGGTGTTCACAGGAATGAAAGATCTTTTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: TTQRSLCQRPRC*VFTGMKDLFGQ
Trigger: CTGACCAAAAAGATCTTTCATTCCTGTGAACACCAAGCAGCGCGGCCTCTGGCAGAGAGAGCGCTGGGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CAA 72 bp AGGGCATCAGGAGGTCAGTTGCAGCCAGGGCCACTATaGGGAGCAGACAGCCTGCTAAACACAAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: RASGGQLQPGPL*GADSLLNTSFH
Trigger: ATGGAAACTTGTGTTTAGCAGGCTGTCTGCTCCCAATAGTGGCCCTGGCTGCAACTGACCTCCTGATGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTACGGTCAGACCACGCCTaGTTACCCGGGAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLRSDHA*LPGKCW
Trigger: CCAGCACTTCCCGGGTAATCAGGCGTGGTCTGACCG...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAGCCAGCCAATCACGGTaGTGTTACCTACACGGTCAC +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARASQSR*CYLHGH
Trigger: GTGACCGTGTAGGTAACATCACCGTGATTGGCTGGC...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCGAGGGCCCTCTGTACTaGTGGAGGTCGGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSEGPLY*WRSVRF
Trigger: GAACCTGACCGACCTCCATCAGTACAGAGGGCCCTC...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCGATCCTCCATCGTCTTaGACTCTCATCCTTTGTATG +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACDPPSS*TLILCM
Trigger: CATACAAAGGATGAGAGTTCAAGACGATGGAGGATC...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGATTTGCGGAGACCTCCTaGCTTAAAACCTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARFAETS*LKTLAV
Trigger: CACTGCCAAGGTTTTAAGTCAGGAGGTCTCCGCAAA...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCTGGCCACGCAGTCGGTaGGAGTGGTCAGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAWPRSR*EWSAAG
Trigger: ACCCGCTGCTGACCACTCTCACCGACTGCGTGGCCA...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACTCCCCATGGGAGTGTTaGCATGCCACATCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNSPWEC*HATSEA
Trigger: GGCCTCAGATGTGGCATGTCAACACTCCCATGGGGA...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAAAGGAATCAGGACACTaGAACGAGGTGCACTGCTAC +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARKESGH*NEVHCY
Trigger: GTAGCAGTGCACCTCGTTTCAGTGTCCTGATTCCTT...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCAACACTCAATGCTGCTaGGGATACTGTGAGAAACCT +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACNTQCC*GYCEKP
Trigger: AGGTTTCTCACAGTATCCTCAGCAGCATTGAGTGTT...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCAACACTCAATGCTGCTaGGGATACTGTGAGAAACCT +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACNTQCC*GYCEKP
Trigger: AGGTTTCTCACAGTATCCTCAGCAGCATTGAGTGTT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCGAAGATCATCTTAAGTaGGAAAGGGAACCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACEDHLK*EREPRR
Trigger: TCTCCTGGGTTCCCTTTCTCACTTAAGATGATCTTC...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATGGTTCAGTGGCTGATTaGTGGGATGTGGAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNGSVAD*WDVEEK
Trigger: TTTCTCCTCCACATCCCATCAATCAGCCACTGAACC...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAAGGTGCTGGTCCTCCTaGCCCGGCCCACGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKRCWSS*PGPRSP
Trigger: CGGGCTCCGTGGGCCGGGGCAGGAGGACCAGCACCT...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTCATTGGTGATGATGTaGTTCTTGATCCTCGGTCAG +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACSLVMM*FLILGQ
Trigger: CTGACCGAGGATCAAGAAGCACATCATCACCAATGA...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAATGCTTCGTCCAGAATaGCTGAGGAGGGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARMLRPE*LRRGGD
Trigger: GTCACCACCCCTCCTCAGGCATTCTGGACGAAGCAT...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAACGCTCTCTGCCATCTaGTCCAGGATCCGCAAATGG +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARTLSAI*SRIRKW
Trigger: CCATTTGCGGATCCTGGAGCAGATGGCAGAGAGCGT...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTGCTTTCAAACTGCTTaGTTTAAACGAGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACCFQTA*FKRGPS
Trigger: AGAGGGCCCTCGTTTAAAGCAAGCAGTTTGAAAGCA...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCACCTTGGCAGTGTGCTaGTGGCGCCCCAATGGTGAC +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSTLAVC*WRPNGD
Trigger: GTCACCATTGGGGCGCCAGCAGCACACTGCCAAGGT...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTATCACAGCCCTCGCCATaGAGCCGCTCCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLSQPSP*SRSFCS
Trigger: GCTGCAGAAGGAGCGGCTGCATGGCGAGGGCTGTGA...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACCATGTCCTCCAGCATTaGCAGCTCCTCCCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNHVLQH*QLLPVG
Trigger: ACCTACGGGGAGGAGCTGGCAATGCTGGAGGACATG...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCGACGGGCAGCATGTCTaGGGAGGCGCTGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTADGQHV*GGAGSG
Trigger: GCCACTTCCAGCGCCTCCGCAGACATGCTGCCCGTC...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGATCGGCCAGTGTCTGCTaGTCATTGATGCCCACGTTG +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARSASVC*SLMPTL
Trigger: CAACGTGGGCATCAATGAGCAGCAGACACTGGCCGA...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCGCAGGCACGTCTGACTaGGAGACCGAGGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSAGTSD*ETEAGN
Trigger: ATTGCCTGCCTCGGTCTCGCAGTCAGACGTGCCTGC...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGACACCCGAGCACTCAATaGAATGCCCAAGAACAATGG +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGHPSTQ*NAQEQW
Trigger: CCATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTG...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACAGTTCTGTGAGGGCCTaGCTGCCAGGAGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNSSVRA*LPGGTA
Trigger: AGCAGTTCCTCCTGGCAGGCAGGCCCTCACAGAACT...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAGTTACCATCAGTGGTTaGAAACCGGTACATGCGGCA +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGVTISG*KPVHAA
Trigger: TGCCGCATGTACCGGTTTCCAACCACTGATGGTAAC...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCAATGGTTACCATCAGTaGTTGGAAACCGGTACATGC +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACNGYHQ*LETGTC
Trigger: GCATGTACCGGTTTCCAACCACTGATGGTAACCATT...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATTTCAGGGTGTTGATCTaGGCGATGATCTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNFRVLI*AMISLA
Trigger: AGCCAAGGAGATCATCGCCCAGATCAACACCCTGAA...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACTCCTCTCAAGGCCAGTaGCAGACCTGTCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNSSQGQ*QTCPWL
Trigger: CAGCCAAGGACAGGTCTGCCACTGGCCTTGAGAGGA...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACTCCATTCACCTGGGCTaGACTCTTCAGGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNSIHLG*TLQEGD
Trigger: GTCCCCCTCCTGAAGAGTCCAGCCCAGGTGAATGGA...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCAAACCGCAGCAGCTCTaGCAGGCACGTCTGACTGCG +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSKPQQL*QARLTA
Trigger: CGCAGTCAGACGTGCCTGCCAGAGCTGCTGCGGTTT...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCATGCACTCCAGGGCCTaGGTGAAGACCTGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAMHSRA*VKTCGA
Trigger: GGCCCCGCAGGTCTTCACCCAGGCCCTGGAGTGCAT...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAAAGGGACCTTACTGCTaGCTTTGTGTCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARKGPYC*LCVSSR
Trigger: TCTGCTGGAGACACAAAGCCAGCAGTAAGGTCCCTT...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATAAGGGACCTTACTGCTaGCTTTGTGTCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNKGPYC*LCVSSR
Trigger: TCTGCTGGAGACACAAAGCCAGCAGTAAGGTCCCTT...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAAGCGCAAAGCCTCCCTaGGACAACTCCCCTAGATCT +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARSAKPP*DNSPRS
Trigger: AGATCTAGGGGAGTTGTCCCAGGGAGGCTTTGCGCT...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCCCTGAGATCTATCTTTaGCATCATACACGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACPEIYL*HHTRRV
Trigger: AACTCTCCGTGTATGATGTCAAAGATAGATCTCAGG...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAAGGGGGCCGTTGGTCTaGCTTCTCCTCCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLRGPLV*LLLHLP
Trigger: TGGCAGATGGAGGAGAAGTCAGACCAACGGCCCCCT...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCACGTTCCTCAAGTCCATaGTCCCAAGGCTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSRSSSP*SQGSCP
Trigger: AGGACATGAGCCTTGGGATCATGGACTTGAGGAACG...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATTCTGGCAGGCACGTCTaGCTGCGAGACCGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNSGRHV*LRDRGR
Trigger: CCTGCCTCGGTCTCGCAGTCAGACGTGCCTGCCAGA...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAGATGTCTGGGCGTCCTaGCATGTCTTCTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSDVWAS*HVFFLA
Trigger: AGCCAAGAAGAAGACATGTCAGGACGCCCAGACATC...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCAATAACCAGGGTCTCTaGGAAGAGGGCACTTTTAAA +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACNNQGL*EEGTFK
Trigger: TTTAAAAGTGCCCTCTTCTCAGAGACCCTGGTTATT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAAGGGCTGTGCTCTCTTaGTGTCATGATGTCATTGGT +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARRAVLS*CHDVIG
Trigger: ACCAATGACATCATGACAGCAAGAGAGCACAGCCCT...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACCCATGGCGAGGGCTGTaGTCTCTTGCTGTCATGATG +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNPWRGL*SLAVMM
Trigger: CATCATGACAGCAAGAGAGCACAGCCCTCGCCATGG...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCATGGTGGAAGCCCGCTaGATTGCACGGGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAMVEAR*IARALA
Trigger: TGCCAGGGCCCGTGCAATGCAGCGGGCTTCCACCAT...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAGTCTTGTATATTTCCTaGCAGAGAGAGGCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARVLYIS*QREAQH
Trigger: ATGCTGGGCCTCTCTCTGGCAGGAAATATACAAGAC...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCAACTGCCGGGGCACGTaGAGGGAGAGCACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTANCRGT*RESTLS
Trigger: AGAGAGCGTGCTCTCCCTGCACGTGCCCCGGCAGTT...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCGTCTCTTCAAATTTGTaGAGCTTTTTGCGGAGACCT +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACVSSNL*SFLRRP
Trigger: AGGTCTCCGCAAAAAGCTGCACAAATTTGAAGAGAC...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAAATGTAGTCAGGCCGTaGAGCGTTCAGCCCATGGAT +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSNVVRP*SVQPMD
Trigger: ATCCATGGGCTGAACGCTGCACGGCCTGACTACATT...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATTTTCTAAGCATCACCTaGTCCTCCTCAGTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNFLSIT*SSSVEV
Trigger: CACTTCGACTGAGGAGGAGCAGGTGATGCTTAGAAA...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGACGGGCAGCATGTCTaGGGAGGCGCTGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNDGQHV*GGAGSG
Trigger: GCCACTTCCAGCGCCTCCGCAGACATGCTGCCCGTC...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACATGCCATGCTCGTGTTaGAGGATCAGGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNMPCSC*RIRHCS
Trigger: GGAGCAGTGCCTGATCCTGCAACACGAGCATGGCAT...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTATGCGGGGCCATGCCATaGTCGTGTTGCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLCGAMP*SCCRIR
Trigger: CCTGATCCTGCAACACGAGCATGGCATGGCCCCGCA...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCGGGAAAGCCTTCAGCTaGAGGGAATTAAATGCATAT +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACGKAFS*RELNAY
Trigger: ATATGCATTTAATTCCCTGCAGCTGAAGGCTTTCCC...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAGAGCACTCAATGCAATaGCCAAGAACAATGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGEHSMQ*PRTMVQ
Trigger: CTGGACCATTGTTCTTGGGCATTGCATTGAGTGCTC...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAGACTGCAATCTTTCTTaGTGGTGCAGCTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARDCNLS*WCSCLH
Trigger: GTGCAGGCAGCTGCACCAGCAAGAAAGATTGCAGTC...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409016.8
CDS-3UTR CCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATTCCAAATCCATCATCTaGCGCTCCCCGGCCCCCGGC +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNSKSII*RSPAPG
Trigger: GCCGGGGGCCGGGGAGCGCCAGATGATGGATTTGGA...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATCGGCCGCCACGTCGATaGTGGAAGCCCGCTGCATTG +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNRPPRR*WKPAAL
Trigger: CAATGCAGCGGGCTTCCACCATCGACGTGGCGGCCG...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAATACCATGGCCTTCTTaGCCTTGTCACTCATCATGG +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARIPWPS*PCHSSW
Trigger: CCATGATGAGTGACAAGGCCAAGAAGGCCATGGTAT...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAATACCATGGCCTTCTTaGCCTTGTCACTCATCATGG +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGIPWPS*PCHSSW
Trigger: CCATGATGAGTGACAAGGCCAAGAAGGCCATGGTAT...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCGCAGGCTCAGGTAGGTaGCTATGGTGGGCGCGCTGT +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAAGSGR*LWWARC
Trigger: ACAGCGCGCCCACCATAGCCACCTACCTGAGCCTGC...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAGAGGCCTGTAATGCTTaGGGAAAGCCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSAREACNA*GKPSAA
Trigger: TGCAGCTGAAGGCTTTCCCCAAGCATTACAGGCCTC...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACTCCAGCCCCTCGTCGTaGGCACGCAGCCACACCACC +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNSSPSS*ARSHTT
Trigger: GGTGGTGTGGCTGCGTGCCCACGACGAGGGGCTGGA...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCAGCGCAGCACCAGAATaGCATGCGGAGGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTASAAPE*HAEGGQ
Trigger: CTGCCCTCCCTCCGCATGCCATTCTGGTGCTGCGCT...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAAGGAACTGCTGGTCTTaGAAGAGCCATCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSRNCWS*KSHPRN
Trigger: GTTCCTGGGATGGCTCTTCCAAGACCAGCAGTTCCT...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACGTCCACGGTGCTGGTTaGTACCCACAGTTAGCGTCA +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNVHGAG*YPQLAS
Trigger: TGACGCTAACTGTGGGTACCAACCAGCACCGTGGAC...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACTTTCAGGCTACACCCTaGGAACCCTGTCGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNFQATP*EPCRSL
Trigger: CAGGCTACGACAGGGTTCCCAGGGTGTAGCCTGAAA...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCTGTGAAAGACCTGCCTaGACTGGCCTGCAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSCERPA*TGLQGP
Trigger: TGGGCCTTGCAGGCCAGTCCAGGCAGGTCTTTCACA...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCCTGGCGCCCCAATGGTaGCGATGTCGTAGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSLAPQW*RCRSSD
Trigger: ATCAGAACTACGACATCGTCACCATTGGGGCGCCAG...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGATGTCCACACGCTGAATaGTGCACTCTAGGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARCPHAE*CTLGSC
Trigger: ACAAGAGCCTAGAGTGCATCATTCAGCGTGTGGACA...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCGAGCAAGCAGGCATTTaGAAAAGTCTTCTAGCATTT +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACEQAGI*KSLLAF
Trigger: AAATGCTAGAAGACTTTTTCAAATGCCTGCTTGCTC...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGATTAAAAAGGAGAATCTaGTACCAGCAGCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGLKRRI*YQQQPP
Trigger: AGGTGGCTGCTGCTGGTATCAGATTCTCCTTTTTAA...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACCCTTCCCTGCACCTCTaGAAACCCAAAGCTCCTACA +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNPSLHL*KPKAPT
Trigger: TGTAGGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGG...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACCCCACAGAGATGATGTaGTCCATGTTCACAGACGGG +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNPTEMM*SMFTDG
Trigger: CCCGTCTGTGAACATGGATCACATCATCTCTGTGGG...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCCTGCTGAGGATACTGTaGGAAACCTCTATTCAAAAA +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACLLRIL*ETSIQK
Trigger: TTTTTGAATAGAGGTTTCTCACAGTATCCTCAGCAG...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACGGTCACACTGCCCACTaGGAGACATCTACTGCTCAT +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNGHTAH*ETSTAH
Trigger: ATGAGCAGTAGATGTCTCTCAGTGGGCAGTGTGACC...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCCAGATCCGAGGGGACTaGTACAGACCAGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAQIRGD*YRPGLG
Trigger: CCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTG...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACGAATACAGAGGGGACTaGCAGTGGACAGGACATGCA +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNEYRGD*QWTGHA
Trigger: TGCATGTCCTGTCCACTGTCAGTCCCCTCTGTATTC...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTAGGTGCTGGTCCTCCTaGCCCGGCCCACGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIRCWSS*PGPRSP
Trigger: CGGGCTCCGTGGGCCGGGGCAGGAGGACCAGCACCT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGATCATTGGTGATGATGTaGTTCTTGATCCTCGGTCAG +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGSLVMM*FLILGQ
Trigger: CTGACCGAGGATCAAGAAGCACATCATCACCAATGA...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGAACTGCCGGGGCACGTaGAGGGAGAGCACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMNCRGT*RESTLS
Trigger: AGAGAGCGTGCTCTCCCTGCACGTGCCCCGGCAGTT...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCTCGTGCCAGTCCACCTaGAGGGAAGATCGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSSCQST*REDRLF
Trigger: AAACAGCCGATCTTCCCTGCAGGTGGACTGGCACGA...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACAGGAAGCCGTCGTCATaGAGGCAGTTCCTCAGCTTA +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNRKPSS*RQFLSL
Trigger: TAAGCTGAGGAACTGCCTGCATGACGACGGCTTCCT...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGCACTCGCAGCAGCATaGCACTCTGGATCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNALAAA*HSGSPG
Trigger: CCCGGGAGATCCAGAGTGGCATGCTGCTGCGAGTGC...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCTCGGCCAGTGTCTGCTaGTCATTGATGCCCACGTTG +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSSASVC*SLMPTL
Trigger: CAACGTGGGCATCAATGAGCAGCAGACACTGGCCGA...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCAGACCTGCGGGGCCATaGCATGCTCGTGTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTARPAGP*HARVAG
Trigger: TCCTGCAACACGAGCATGGCATGGCCCCGCAGGTCT...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTATTCGACAACCCTCACTaGGCATGCACTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLFDNPH*ACTPGP
Trigger: AGGCCCTGGAGTGCATGCGCAGTGAGGGTTGTCGAA...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAGCAGCCACACCACCATaGCCACAAGGACATGGCTGT +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLAATPP*PQGHGC
Trigger: ACAGCCATGTCCTTGTGGGCATGGTGGTGTGGCTGC...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATAAAATGGTGCCAACCTaGTGTGTGATGCTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNKMVPT*CVMLVK
Trigger: CTTTACCAGCATCACACAGCAGGTTGGCACCATTTT...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGACCAAAGAGGTCACACTaGCCACTGAGAGACATCTAC +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARPKRSH*PLRDIY
Trigger: GTAGATGTCTCTCAGTGGGCAGTGTGACCTCTTTGG...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAAGTTCTGTGAGGGCCTaGCTGCCAGGAGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLSSVRA*LPGGTA
Trigger: AGCAGTTCCTCCTGGCAGGCAGGCCCTCACAGAACT...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGCCGATAAGCCAGCTCTaGCCCTCTCTGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMPISQL*PSLEAL
Trigger: GAGGGCCTCCAGAGAGGGGCAGAGCTGGCTTATCGG...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTCCCGGCCTCAGGTGCTaGTCCTCCTGCCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIPGLRC*SSCPGP
Trigger: TGGGCCGGGGCAGGAGGACCAGCACCTGAGGCCGGG...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGATGCTCTCGGACCATGTaGCATTTCTTCATAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARCSRTM*HFFIEA
Trigger: TGCTTCTATGAAGAAATGCCACATGGTCCGAGAGCA...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACGCATTGCACGGGCCCTaGCACCATGGCGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNALHGP*HHGEGC
Trigger: ACAGCCCTCGCCATGGTGCCAGGGCCCGTGCAATGC...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTACGGCCGCCACGTCGATaGTGGAAGCCCGCTGCATTG +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLRPPRR*WKPAAL
Trigger: CAATGCAGCGGGCTTCCACCATCGACGTGGCGGCCG...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAGTCACAGGGGGCCGTTaGTCTGACTTCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLVTGGR*SDFSSI
Trigger: GATGGAGGAGAAGTCAGACCAACGGCCCCCTGTGAC...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGACCAGCTCACACACTCTaGCTGCATCTTCCTCTAGTA +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARPAHTL*LHLPLV
Trigger: TACTAGAGGAAGATGCAGCCAGAGTGTGTGAGCTGG...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCACCAGCTCACACACTCTaGCTGCATCTTCCTCTAGTA +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSPAHTL*LHLPLV
Trigger: TACTAGAGGAAGATGCAGCCAGAGTGTGTGAGCTGG...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACATGATGGTCTGGTACTaGGTGACAATTTGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNMMVWY*VTIWRR
Trigger: CCGGCGCCAAATTGTCACCCAGTACCAGACCATCAT...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGATCGGTCAGGTTCTCCTaGTATGTGAGGATGATGGTC +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARSVRFS*YVRMMV
Trigger: GACCATCATCCTCACATACCAGGAGAACCTGACCGA...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTATTGGCAGTGTGCTGCTaGCGCCCCAATGGTGACGAT +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLLAVCC*RPNGDD
Trigger: ATCGTCACCATTGGGGCGCCAGCAGCACACTGCCAA...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCCCTGACTTAAAACCTTaGCAGTGTGCTGCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSPDLKP*QCAAGA
Trigger: GGCGCCAGCAGCACACTGCCAAGGTTTTAAGTCAGG...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTACCTCCTCAGTCGAAGTaGGAGAGGCCTTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLPPQSK*ERPWRQ
Trigger: TTGCCTCCAAGGCCTCTCCCACTTCGACTGAGGAGG...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACACAGAAGGGGTCTTCTaGTCTGATCCAGTAGGCGTG +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNTEGVF*SDPVGV
Trigger: CACGCCTACTGGATCAGACCAGAAGACCCCTTCTGT...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000074304.9
ENST00000409851.8
CDS-3UTR CCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACGGGGACTGCAATGTGTaGTCAGATGAGGATGGCATG +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNGDCNV*SDEDGM
Trigger: CATGCCATCCTCATCTGACCACACATTGCAGTCCCC...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000074304.9
ENST00000409851.8
CDS-3UTR CCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCTCAGGTAGGTGGCTATaGTGGGCGCGCTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTASGRWL*WARCPA
Trigger: TGCAGGACAGCGCGCCCACCATAGCCACCTACCTGA...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGGCAGGCTCAGGTAGGTaGCTATGGTGGGCGCGCTGT +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMAGSGR*LWWARC
Trigger: ACAGCGCGCCCACCATAGCCACCTACCTGAGCCTGC...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCCCTGTGCAGTGGGTTTaGCGGGCAGGAGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAPVQWV*RAGASL
Trigger: CAGAGAAGCTCCTGCCCGCCAAACCCACTGCACAGG...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGCAGCCACCTGTGCAGTaGGTTTGGCGGGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMQPPVQ*VWRAGA
Trigger: AGCTCCTGCCCGCCAAACCCACTGCACAGGTGGCTG...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATTCATACAACGAGGACTaGGTTACCCACAGAGATGAT +
Preference number: 4 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNSYNED*VTHRDD
Trigger: ATCATCTCTGTGGGTAACCCAGTCCTCGTTGTATGA...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAAGGGAATCTAGAGTATaGGTGTTTTCAGGCTACACC +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGRESRV*VFSGYT
Trigger: GGTGTAGCCTGAAAACACCCATACTCTAGATTCCCT...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATAGGGGGCCGTTGGTCTaGCTTCTCCTCCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNRGPLV*LLLHLP
Trigger: TGGCAGATGGAGGAGAAGTCAGACCAACGGCCCCCT...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGTGGTCTGGTACTGGGTaGCAATTTGGCGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMWSGTG*QFGAGG
Trigger: GCCTCCGGCGCCAAATTGTCACCCAGTACCAGACCA...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGGAGGGCCCTCTGTACTaGTGGAGGTCGGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMEGPLY*WRSVRF
Trigger: GAACCTGACCGACCTCCATCAGTACAGAGGGCCCTC...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGGTCCTTGGCTGCCCTTaGCAGCCGCTCTGCGTAGTA +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMVLGCP*QPLCVV
Trigger: TACTACGCAGAGCGGCTGTCAAGGGCAGCCAAGGAC...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGCGCGCTGTCCTGCATaGGCAGGAATACCATGGCCT +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNARCPA*AGIPWP
Trigger: AGGCCATGGTATTCCTGCTCATGCAGGACAGCGCGC...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAATCTGGCAGGCACGTCTaGCTGCGAGACCGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKSGRHV*LRDRGR
Trigger: CCTGCCTCGGTCTCGCAGTCAGACGTGCCTGCCAGA...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR TCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACCGGGCATGCACGTTCTaGCCCAGAAACCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNRACTF*PRNRSS
Trigger: GCTGCTGCGGTTTCTGGGTCAGAACGTGCATGCCCG...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGCAGTTCCACCCTACCTaGTGCCCACCCCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMQFHPT*CPPPLC
Trigger: ACACAGAGGGGGTGGGCATCAGGTAGGGTGGAACTG...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGACACATGCAAAACTGCTaGCAGATGATCAACATTTGC +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARHMQNC*QMINIC
Trigger: GCAAATGTTGATCATCTGTCAGCAGTTTTGCATGTG...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCCCGGAAGCCCAGGAATaGTGCCTTCAGAGAGAATAC +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSPEAQE*CLQREY
Trigger: GTATTCTCTCTGAAGGCATCATTCCTGGGCTTCCGG...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAGGCACTGGAAGCGTGTaGTGCTGCCGGAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKGTGSV*CCRKPR
Trigger: CCTGGGCTTCCGGCAGCATCACACGCTTCCAGTGCC...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTTAATAATATTAAACTaGGCATGGCCCATGCACCAA +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACLIILN*AWPMHQ
Trigger: TTGGTGCATGGGCCATGCTCAGTTTAATATTATTAA...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACGCCTTGCAGGAGGGGTaGGGATGCTCAGGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNALQEG*GCSGEV
Trigger: GACCTCTCCTGAGCATCCTCACCCCTCCTGCAAGGC...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGATCTCCTTTGACCTTTTaGATTTGGCTCGTGATGCAT +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGSPLTF*IWLVMH
Trigger: ATGCATCACGAGCCAAATTCAAAAGGTCAAAGGAGA...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAATTTGCCTTCTCCTTTaGCCTTTTGAATTTGGCTCG +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARICLLL*PFEFGS
Trigger: CGAGCCAAATTCAAAAGGTCAAAGGAGAAGGCAAAT...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAAGGGCTGTGCTCTCTTaGTGTCATGATGTCATTGGT +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSRAVLS*CHDVIG
Trigger: ACCAATGACATCATGACAGCAAGAGAGCACAGCCCT...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTACCATGGCGAGGGCTGTaGTCTCTTGCTGTCATGATG +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLPWRGL*SLAVMM
Trigger: CATCATGACAGCAAGAGAGCACAGCCCTCGCCATGG...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACATGGTGGAAGCCCGCTaGATTGCACGGGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNMVEAR*IARALA
Trigger: TGCCAGGGCCCGTGCAATGCAGCGGGCTTCCACCAT...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGGAGAGCACGCTCTCTaGCATCTGCTCCAGGATCCG +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNGEHAL*HLLQDP
Trigger: CGGATCCTGGAGCAGATGGCAGAGAGCGTGCTCTCC...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTACAGATGAGGATGGCATaGAGTGGAGGGCATGGTGGA +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLQMRMA*SGGHGG
Trigger: TCCACCATGCCCTCCACTGCATGCCATCCTCATCTG...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409851.8
CDS-3UTR GCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGCTCCTCCCCGTAGGTaGTCAGCAGGCTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNAPPRR*SAGSRT
Trigger: AGTTCGAGAGCCTGCTGAGCACCTACGGGGAGGAGC...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAGACGGGCAGCATGTCTaGGGAGGCGCTGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKDGQHV*GGAGSG
Trigger: GCCACTTCCAGCGCCTCCGCAGACATGCTGCCCGTC...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCTTGAAGAGGACGGGCTaGACTCGCAGCAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTALKRTG*TRSSMP
Trigger: TGGCATGCTGCTGCGAGTGCAGCCCGTCCTCTTCAA...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTATGCAGGATCAGGCACTaGTCCAGTGTCACCGACATG +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLCRIRH*SSVTDM
Trigger: CATGTCGGTGACACTGGAGCAGTGCCTGATCCTGCA...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAGCCTGGGTGAAGACCTaGGGGGCCATGCCATGCTCG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKAWVKT*GAMPCS
Trigger: CGAGCATGGCATGGCCCCGCAGGTCTTCACCCAGGC...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCTTCGACAACCCTCACTaGGCATGCACTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAFDNPH*ACTPGP
Trigger: AGGCCCTGGAGTGCATGCGCAGTGAGGGTTGTCGAA...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCCTAAGAAACAAACTCTaGTATGTGCAGATAAGACTC +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACLRNKL*YVQIRL
Trigger: GAGTCTTATCTGCACATAGCAGAGTTTGTTTCTTAG...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAAGCAGCAGCCACCTGTaGAGTGGGTTTGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLSSSHL*SGFGGQ
Trigger: CTGCCCGCCAAACCCACTGCACAGGTGGCTGCTGCT...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCATTCCCTTTGATGAGTaGAGATATTTAATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: TDIFLPAGIGRQQALLACIPFDE*RYLMLS
Trigger: GGAGAGCATTAAATATCTGCACTCATCAAAGGGAAT...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACAGAGGTCAAGCAACTTaGTCAGAGTCACCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNRGQAT*SESPAS
Trigger: ACTGGCTGGTGACTCTGAGCAAGTTGCTTGACCTCT...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACCACAGTGGTGCAAGATaGAGTCCTGGTGACGATGAA +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNHSGAR*SPGDDE
Trigger: TTCATCGTCACCAGGACTGCATCTTGCACCACTGTG...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAGACACTGAAACGAGGTaGACTGCTACCATCAATGAG +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSDTETR*TATINE
Trigger: CTCATTGATGGTAGCAGTGCACCTCGTTTCAGTGTC...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCCTGGGGTTCCTTCTGTaGACAGCAGAGCAGTGCCCT +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTALGFLL*TAEQCP
Trigger: AGGGCACTGCTCTGCTGTGCACAGAAGGAACCCCAG...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTACATCAGGAGGTCAGTTaGAGCCAGGGCCACTATTGG +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLHQEVS*SQGHYW
Trigger: CCAATAGTGGCCCTGGCTGCAACTGACCTCCTGATG...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGGCCCATGGATGGAGTTaGCCAGGAGCTTGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMAHGWS*PGACSR
Trigger: GCGACTGCAAGCTCCTGGCCAACTCCATCCATGGGC...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATTCAGGTAGGTGGCTATaGTGGGCGCGCTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNSGRWL*WARCPA
Trigger: TGCAGGACAGCGCGCCCACCATAGCCACCTACCTGA...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAATGCACTCCAGGGCCTaGGTGAAGACCTGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKMHSRA*VKTCGA
Trigger: GGCCCCGCAGGTCTTCACCCAGGCCCTGGAGTGCAT...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACGGTCCAGTCACAGGCTaGTCACATAGAACTAGTCCT +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNGPVTG*SHRTSP
Trigger: AGGACTAGTTCTATGTGACCAGCCTGTGACTGGACC...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTACGATGTCCACGGTGCTaGTTGGTACCCACAGTTAGC +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLRCPRC*LVPTVS
Trigger: GCTAACTGTGGGTACCAACCAGCACCGTGGACATCG...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCACTGTTGGCACAGGATaGGGGGTGGAATCGTATGGA +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSTVGTG*GVESYG
Trigger: TCCATACGATTCCACCCCCCATCCTGTGCCAACAGT...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAAAGACAGGGTTCCAGTaGAGGGAATCTAGAGTATGG +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSKTGFQ*RESRVW
Trigger: CCATACTCTAGATTCCCTCCACTGGAACCCTGTCTT...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAAAGACCTGCCTGGACTaGCCTGCAAGGCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLKTCLD*PARPTG
Trigger: CCCTGTGGGCCTTGCAGGCCAGTCCAGGCAGGTCTT...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGACCTTGGGGGAGAGTCTaGGATGGACCTAGAAATTTA +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARPWGRV*DGPRNL
Trigger: TAAATTTCTAGGTCCATCCCAGACTCTCCCCCAAGG...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGGAAATTATGGGATaGTTCTCAAGAGATACAGGT +
Preference number: 4 (lower is better)
Translates to: LHRHFPPCRHRETAGAACMEIMG*FSRDTG
Trigger: ACCTGTATCTCTTGAGAACCATCCCATAATTTCCAT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CAA 72 bp AACAGGAGACAGGCTAAAGGGACCTTACTGCTGGCTTaGTGTCTCCAGCAGACTCCCTGTTCTGTAACTCAT +
Preference number: 4 (lower is better)
Translates to: NRRQAKGTLLLA*CLQQTPCSVTH
Trigger: ATGAGTTACAGAACAGGGAGTCTGCTGGAGACACAAAGCCAGCAGTAAGGTCCCTTTAGCCTGTCTCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAACGGTCAGACCACGCCTaGTTACCCGGGAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKRSDHA*LPGKCW
Trigger: CCAGCACTTCCCGGGTAATCAGGCGTGGTCTGACCG...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR TCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATCCTGAGGAGGGGTGGTaGCACTCACCGCAACAAAAC +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNPEEGW*HSPQQN
Trigger: GTTTTGTTGCGGTGAGTGTCACCACCCCTCCTCAGG...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATTTCGTCCAGAATGCCTaGGGAGGGGTGGTGACACTC +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNFVQNA*GGVVTL
Trigger: GAGTGTCACCACCCCTCCTCAGGCATTCTGGACGAA...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAAGTGTCCTTTCGCAATaGAGCGTATTTGGATCGGAT +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSSVLSQ*SVFGSD
Trigger: ATCCGATCCAAATACGCTTCATTGCGAAAGGACACT...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTATGGTCTGGTACTGGGTaGCAATTTGGCGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLWSGTG*QFGAGG
Trigger: GCCTCCGGCGCCAAATTGTCACCCAGTACCAGACCA...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAGAGGGCCCTCTGTACTaGTGGAGGTCGGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLEGPLY*WRSVRF
Trigger: GAACCTGACCGACCTCCATCAGTACAGAGGGCCCTC...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATTACTATCCACACTATTaGGCCAAACATTACCTCCTA +
Preference number: 4 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNYYPHY*AKHYLL
Trigger: TAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTA...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAGAGCAAGCAGGCATTTaGAAAAGTCTTCTAGCATTT +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGEQAGI*KSLLAF
Trigger: AAATGCTAGAAGACTTTTTCAAATGCCTGCTTGCTC...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTTGTGTCCTCTGGGCGTaGGGGAGCCTCGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPCVLWA*GSLGRE
Trigger: CTCCCTGCCGAGGCTCCCTCACGCCCAGAGGACACA...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTACCTTCCCTGCACCTCTaGAAACCCAAAGCTCCTACA +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLPSLHL*KPKAPT
Trigger: TGTAGGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGG...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAGTCCTCCTAATAGGATaGATCAGGCAAGACCACATT +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARVLLIG*IRQDHI
Trigger: AATGTGGTCTTGCCTGATTCATCCTATTAGGAGGAC...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAAATGGCTACCATTTATaGACACGTACTTCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARNGYHL*TRTSEA
Trigger: CGCCTCAGAAGTACGTGTTCATAAATGGTAGCCATT...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACTCTAGCGATGGAGTATaGAGCTCACTGCAAGCTAAG +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNSSDGV*SSLQAK
Trigger: CTTAGCTTGCAGTGAGCTGCATACTCCATCGCTAGA...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCATGCTTCGTCCAGAATaGCTGAGGAGGGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAMLRPE*LRRGGD
Trigger: GTCACCACCCCTCCTCAGGCATTCTGGACGAAGCAT...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGGTGGGCGCGCTGTCCTaGATGAGCAGGAATACCATG +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMVGALS*MSRNTM
Trigger: CATGGTATTCCTGCTCATGCAGGACAGCGCGCCCAC...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAGCTCCTCCCCGTAGGTaGTCAGCAGGCTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLAPPRR*SAGSRT
Trigger: AGTTCGAGAGCCTGCTGAGCACCTACGGGGAGGAGC...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAGCACTCGCAGCAGCATaGCACTCTGGATCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKALAAA*HSGSPG
Trigger: CCCGGGAGATCCAGAGTGGCATGCTGCTGCGAGTGC...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCTCGGCCAGTGTCTGCTaGTCATTGATGCCCACGTTG +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTASASVC*SLMPTL
Trigger: CAACGTGGGCATCAATGAGCAGCAGACACTGGCCGA...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACTGCGGGGCCATGCCATaGTCGTGTTGCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNCGAMP*SCCRIR
Trigger: CCTGATCCTGCAACACGAGCATGGCATGGCCCCGCA...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGTTCGACAACCCTCACTaGGCATGCACTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMFDNPH*ACTPGP
Trigger: AGGCCCTGGAGTGCATGCGCAGTGAGGGTTGTCGAA...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACCACACACCCTCACCCTaGAGGCACTGGAAGCGTGTG +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNHTPSP*RHWKRV
Trigger: CACACGCTTCCAGTGCCTGCAGGGTGAGGGTGTGTG...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAAAAATGGTGCCAACCTaGTGTGTGATGCTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARKMVPT*CVMLVK
Trigger: CTTTACCAGCATCACACAGCAGGTTGGCACCATTTT...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCCCTGCCAGGAGGAACTaGTGGTCTTGGAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAPARRN*WSWKSH
Trigger: ATGGCTCTTCCAAGACCAGCAGTTCCTCCTGGCAGG...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAACCGATAAGCCAGCTCTaGCCCTCTCTGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKPISQL*PSLEAL
Trigger: GAGGGCCTCCAGAGAGGGGCAGAGCTGGCTTATCGG...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAATGCTGTATTTGAGATaGCTGCAAGACAGGCATGGT +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSMLYLR*LQDRHG
Trigger: ACCATGCCTGTCTTGCAGGCATCTCAAATACAGCAT...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTATTACCCGGGAAGTGCTaGCACCGAGCCCTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLLPGKC*HRALVH
Trigger: GTGGACTAGGGCTCGGTGCCAGCACTTCCCGGGTAA...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAACCGCCACGTCGATGGTaGAAGCCCGCTGCATTGCAC +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKPPRRW*KPAALH
Trigger: GTGCAATGCAGCGGGCTTCCACCATCGACGTGGCGG...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAGCAATGAAGCGTATTTaGATCGGATTCCTAACGCCT +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSAMKRI*IGFLTP
Trigger: AGGCGTTAGGAATCCGATCCAAATACGCTTCATTGC...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAATGATGGTCTGGTACTaGGTGACAATTTGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLMMVWY*VTIWRR
Trigger: CCGGCGCCAAATTGTCACCCAGTACCAGACCATCAT...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCTTCAGGGTGTTGATCTaGGCGATGATCTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSFRVLI*AMISLA
Trigger: AGCCAAGGAGATCATCGCCCAGATCAACACCCTGAA...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTATGGCAGACCTGTCCTTaGCTGCCCTTGACAGCCGCT +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLWQTCP*LPLTAA
Trigger: AGCGGCTGTCAAGGGCAGCCAAGGACAGGTCTGCCA...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATCGTTCAGCCCATGGATaGAGTTGGCCAGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNRSAHG*SWPGAC
Trigger: GCAAGCTCCTGGCCAACTCCATCCATGGGCTGAACG...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACGCAGCGTTCAGCCCATaGATGGAGTTGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNAAFSP*MELARS
Trigger: GCTCCTGGCCAACTCCATCCATGGGCTGAACGCTGC...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACAAACCGCAGCAGCTCTaGCAGGCACGTCTGACTGCG +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNKPQQL*QARLTA
Trigger: CGCAGTCAGACGTGCCTGCCAGAGCTGCTGCGGTTT...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAATCCCAGGAACACGATaGCATGTGAGGCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLIPGTR*HVRPVP
Trigger: AGGAACTGGCCTCACATGCCATCGTGTTCCTGGGAT...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAGGGGGTGGAATCGTATaGAGGGTGCAGCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLGGGIV*RVQPQA
Trigger: AGCCTGAGGCTGCACCCTCCATACGATTCCACCCCC...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATTGTGAAAGACCTGCCTaGACTGGCCTGCAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNCERPA*TGLQGP
Trigger: TGGGCCTTGCAGGCCAGTCCAGGCAGGTCTTTCACA...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGAGACTCAGCCAGCTTaGAGGAGGAGAGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNETQPA*RRRGMS
Trigger: GCTCATGCCTCTCCTCCTCCAAGCTGGCTGAGTCTC...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGATTGATAAGAGAGTCTTaGAAGAAGGCAATACTGCTT +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARLIRES*KKAILL
Trigger: AAGCAGTATTGCCTTCTTTCAAGACTCTCTTATCAA...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAGTCCTTGGCTGCCCTTaGCAGCCGCTCTGCGTAGTA +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKVLGCP*QPLCVV
Trigger: TACTACGCAGAGCGGCTGTCAAGGGCAGCCAAGGAC...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAAGGGGTCTTCTGGTCTaGTCCAGTAGGCGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLRGLLV*SSRRGC
Trigger: ACAGCCACGCCTACTGGATCAGACCAGAAGACCCCT...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409851.8
CDS-3UTR TCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCCAATGTGTGGTCAGATaGGGATGGCATGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAQCVVR*GWHAVE
Trigger: CTCCACTGCATGCCATCCTCATCTGACCACACATTG...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000074304.9
ENST00000409851.8
CDS-3UTR TCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCCGTTCCTCAAGTCCATaGTCCCAAGGCTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTARSSSP*SQGSCP
Trigger: AGGACATGAGCCTTGGGATCATGGACTTGAGGAACG...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTTCTGGCAGGCACGTCTaGCTGCGAGACCGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPSGRHV*LRDRGR
Trigger: CCTGCCTCGGTCTCGCAGTCAGACGTGCCTGCCAGA...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR TCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAGCGCTGCTTGCATGCTaGCTTCTGAGTAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKALLAC*LLSRRG
Trigger: CCCCCTCCTACTCAGAAGTCAGCATGCAAGCAGCGC...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACTTAAAAAGGAGAATCTaGTACCAGCAGCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNLKRRI*YQQQPP
Trigger: AGGTGGCTGCTGCTGGTATCAGATTCTCCTTTTTAA...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCGAGATGGTGGAGAGGTaGAAGGGTAAATCAGCCATA +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSEMVER*KGKSAI
Trigger: TATGGCTGATTTACCCTTTCACCTCTCCACCATCTC...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGACTTCAGAGAGAATACTaGAACCTGAACCTTTTCTAT +
Preference number: 4 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARLQREY*NLNLFY
Trigger: ATAGAAAAGGTTCAGGTTTCAGTATTCTCTCTGAAG...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGATGAACACGTACTTCTaGGGCGCGTCGCACGTTCCT +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMMNTYF*GASHVP
Trigger: AGGAACGTGCGACGCGCCTCAGAAGTACGTGTTCAT...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGATTAATAATATTAAACTaGGCATGGCCCATGCACCAA +
Preference number: 4 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGLIILN*AWPMHQ
Trigger: TTGGTGCATGGGCCATGCTCAGTTTAATATTATTAA...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCAAGCGTGGTCCAGTGCTaGAATAGGAAATATTTCAGT +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSSVVQC*NRKYFS
Trigger: ACTGAAATATTTCCTATTTCAGCACTGGACCACGCT...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCACAAGATAACATTGCCTaGACCCCCTGTAATTTTAGC +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSQDNIA*TPCNFS
Trigger: GCTAAAATTACAGGGGGTTCAGGCAATGTTATCTTG...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGCGCTGGAAGTGGCCTaGGGAGGGGTGGTGACACTC +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIALEVA*GGVVTL
Trigger: GAGTGTCACCACCCCTCCTCAGGCCACTTCCAGCGC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409463.5
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGGAAGCCCGCTGCATTaGACGGGCCCTGGCACCATG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPGSPLH*TGPGTM
Trigger: CATGGTGCCAGGGCCCGTGCAATGCAGCGGGCTTCC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGACGCTCTCTGCCATCTaGTCCAGGATCCGCAAATGG +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMTLSAI*SRIRKW
Trigger: CCATTTGCGGATCCTGGAGCAGATGGCAGAGAGCGT...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGAAAACCTTGGCAGTGTaGTGCTGGCGCCCCAATGGT +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMKTLAV*CWRPNG
Trigger: ACCATTGGGGCGCCAGCAGCACACTGCCAAGGTTTT...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAATGCAGCCGCTCCTTCTaGAGCAGCTTGTCCACACGC +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKCSRSF*SSLSTR
Trigger: GCGTGTGGACAAGCTGCTGCAGAAGGAGCGGCTGCA...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAAGACCTGCGGGGCCATaGCATGCTCGTGTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKRPAGP*HARVAG
Trigger: TCCTGCAACACGAGCATGGCATGGCCCCGCAGGTCT...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGCCTGGGTGAAGACCTaGGGGGCCATGCCATGCTCG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPAWVKT*GAMPCS
Trigger: CGAGCATGGCATGGCCCCGCAGGTCTTCACCCAGGC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAGGGCAGGAGCTTCTCTaGTTCCTGCCTGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKGQELL*FLPATV
Trigger: CACTGTGGCAGGCAGGAAGCAGAGAAGCTCCTGCCC...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCACAGAAGAGAGGAGCTaGTTGCCTCTGTGCCACACA +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTATEERS*LPLCHT
Trigger: TGTGTGGCACAGAGGCAAGCAGCTCCTCTCTTCTGT...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCACGCTGTTGCCCCTCTaGTTCAAATTAGGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSTLLPL*FKLGRN
Trigger: GTTTCTGCCTAATTTGAAGCAGAGGGGCAACAGCGT...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCATAACGGGTCGTGTGTaGCTAGAAGACGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAITGRV*LEDGTV
Trigger: CACTGTGCCGTCTTCTAGGCACACACGACCCGTTAT...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAGCAGCCACACCACCATaGCCACAAGGACATGGCTGT +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLAATPP*PQGHGC
Trigger: ACAGCCATGTCCTTGTGGGCATGGTGGTGTGGCTGC...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTATGCCAGAGGCCGCGCTaGTTGGTGTTCACAGGAATG +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLCQRPR*LVFTGM
Trigger: CATTCCTGTGAACACCAAGCAGCGCGGCCTCTGGCA...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTACCCAGCGCTCTCTCTaGCAGAGGCCGCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPTQRSL*QRPRCL
Trigger: CAAGCAGCGCGGCCTCTGGCAGAGAGAGCGCTGGGT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAAGGATCCCACTACACTaGAGAGCACGGTGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLRIPLH*RARCSP
Trigger: GGGGCTACACCGTGCTCTGCAGTGTAGTGGGATCCT...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGCATTGCACGGGCCCTaGCACCATGGCGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIALHGP*HHGEGC
Trigger: ACAGCCCTCGCCATGGTGCCAGGGCCCGTGCAATGC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTCGGCCGCCACGTCGATaGTGGAAGCCCGCTGCATTG +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIRPPRR*WKPAAL
Trigger: CAATGCAGCGGGCTTCCACCATCGACGTGGCGGCCG...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCTCCAGGATCCGCAAATaGTTACCATCAGTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSSRIRK*LPSVVG
Trigger: TCCAACCACTGATGGTAACCATTTGCGGATCCTGGA...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATCCTGACTTAAAACCTTaGCAGTGTGCTGCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNPDLKP*QCAAGA
Trigger: GGCGCCAGCAGCACACTGCCAAGGTTTTAAGTCAGG...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCGGGGTATGTAGATTATaGACTGGCAGCCAGATGATG +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSGVCRL*TGSQMM
Trigger: CATCATCTGGCTGCCAGTCCATAATCTACATACCCC...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCTCTTGTCTGCCAAGATaGCGAGTGTCCTCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTASCLPR*RVSSQG
Trigger: GCCTTGAGAGGACACTCGCCATCTTGGCAGACAAGA...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTACCTCCTCAGTCGAAGTaGGAGAGGCCTTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLPPQSK*ERPWRQ
Trigger: TTGCCTCCAAGGCCTCTCCCACTTCGACTGAGGAGG...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGCTCACTCCATTCACCTaGGCTGGACTCTTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMLTPFT*AGLFRR
Trigger: CCTCCTGAAGAGTCCAGCCCAGGTGAATGGAGTGAG...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATCTCACTCCATTCACCTaGGCTGGACTCTTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNLTPFT*AGLFRR
Trigger: CCTCCTGAAGAGTCCAGCCCAGGTGAATGGAGTGAG...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGGGCCAGCAGCCCGATaGTGTAGAGCTGGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPGPAAR*CRAGAG
Trigger: TCCTGCGCCAGCTCTACACCATCGGGCTGCTGGCCC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTGGGCCAGCAGCCCGATaGTGTAGAGCTGGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIGPAAR*CRAGAG
Trigger: TCCTGCGCCAGCTCTACACCATCGGGCTGCTGGCCC...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAAAACCGCAGCAGCTCTaGCAGGCACGTCTGACTGCG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKKPQQL*QARLTA
Trigger: CGCAGTCAGACGTGCCTGCCAGAGCTGCTGCGGTTT...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
48% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAATGCCTCAGCACCCCTaGCCCAAGTTTGTTACATGT +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLMPQHP*PKFVTC
Trigger: ACATGTAACAAACTTGGGCCAGGGGTGCTGAGGCAT...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACGGGCAGAACCAGGATTaGGACCTGGTCTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNGQNQD*DLVCVL
Trigger: GAGCACACAGACCAGGTCCCAATCCTGGTTCTGCCC...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACTCATACAACGAGGACTaGGTTACCCACAGAGATGAT +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNSYNED*VTHRDD
Trigger: ATCATCTCTGTGGGTAACCCAGTCCTCGTTGTATGA...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCTGCAATCTTTCTTGCTaGTGCAGCTGCCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTACNLSC*CSCLHR
Trigger: CCTGTGCAGGCAGCTGCACCAGCAAGAAAGATTGCA...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409016.8
CDS-3UTR CCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCATGCCCACAAGGACATaGCTGTCCCATATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAMPTRT*LSHMSH
Trigger: GTGGGACATATGGGACAGCCATGTCCTTGTGGGCAT...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACGCCAGGAGGAACTGCTaGTCTTGGAAGAGCCATCCC +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNARRNC*SWKSHP
Trigger: GGGATGGCTCTTCCAAGACCAGCAGTTCCTCCTGGC...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAGAGACTCAGCCAGCTTaGAGGAGGAGAGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLETQPA*RRRGMS
Trigger: GCTCATGCCTCTCCTCCTCCAAGCTGGCTGAGTCTC...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTTGTCTGCGGAGGCGCTaGAAGTGGCCTGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPCLRRR*KWPEEG
Trigger: CCCCTCCTCAGGCCACTTCCAGCGCCTCCGCAGACA...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409463.5
CDS-3UTR TCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTCGGTCAGACCACGCCTaGTTACCCGGGAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPRSDHA*LPGKCW
Trigger: CCAGCACTTCCCGGGTAATCAGGCGTGGTCTGACCG...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR TCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCAGTGTCCTTTCGCAATaGAGCGTATTTGGATCGGAT +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSSVLSQ*SVFGSD
Trigger: ATCCGATCCAAATACGCTTCATTGCGAAAGGACACT...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCTGTCCACACGCTGAATaGTGCACTCTAGGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTACPHAE*CTLGSC
Trigger: ACAAGAGCCTAGAGTGCATCATTCAGCGTGTGGACA...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATAGCTTGTCCACACGCTaGATGATGCACTCTAGGCTC +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNSLSTR*MMHSRL
Trigger: GAGCCTAGAGTGCATCATTCAGCGTGTGGACAAGCT...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAGCGCTGGAAGTGGCCTaGGTGACTTTGAAGGTCACG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKALEVA*VTLKVT
Trigger: CGTGACCTTCAAAGTCACTCAGGCCACTTCCAGCGC...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTCGGGCATGCACGTTCTaGCCCAGAAACCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPRACTF*PRNRSS
Trigger: GCTGCTGCGGTTTCTGGGTCAGAACGTGCATGCCCG...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR TCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCTTGACATGCCACATCTaGGGCCCTACATTAACATCT +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSLTCHI*GPTLTS
Trigger: AGATGTTAATGTAGGGCCTCAGATGTGGCATGTCAA...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCTTAAAAAGGAGAATCTaGTACCAGCAGCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSLKRRI*YQQQPP
Trigger: AGGTGGCTGCTGCTGGTATCAGATTCTCCTTTTTAA...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATCCGGAAGCCCAGGAATaGTGCCTTCAGAGAGAATAC +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNPEAQE*CLQREY
Trigger: GTATTCTCTCTGAAGGCATCATTCCTGGGCTTCCGG...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATAGACAAATCGTAGACTaGTCCTGGGGCCGATGTCCA +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNRQIVD*SWGRCP
Trigger: TGGACATCGGCCCCAGGATCAGTCTACGATTTGTCT...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTGCCTTGCAGGAGGGGTaGGGATGCTCAGGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIALQEG*GCSGEV
Trigger: GACCTCTCCTGAGCATCCTCACCCCTCCTGCAAGGC...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCTCATTGGTGATGATGTaGTTCTTGATCCTCGGTCAG +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSSLVMM*FLILGQ
Trigger: CTGACCGAGGATCAAGAAGCACATCATCACCAATGA...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATGGTGGAAGCCCGCTaGATTGCACGGGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPMVEAR*IARALA
Trigger: TGCCAGGGCCCGTGCAATGCAGCGGGCTTCCACCAT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGACTTCTCCTCCATCTaGCAGCCAATCACGGTGATG +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNDFSSI*QPITVM
Trigger: CATCACCGTGATTGGCTGGCAGATGGAGGAGAAGTC...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACGTCTCTTCAAATTTGTaGAGCTTTTTGCGGAGACCT +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNVSSNL*SFLRRP
Trigger: AGGTCTCCGCAAAAAGCTGCACAAATTTGAAGAGAC...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATAATGTAGTCAGGCCGTaGAGCGTTCAGCCCATGGAT +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNNVVRP*SVQPMD
Trigger: ATCCATGGGCTGAACGCTGCACGGCCTGACTACATT...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTATTTCTAAGCATCACCTaGTCCTCCTCAGTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLFLSIT*SSSVEV
Trigger: CACTTCGACTGAGGAGGAGCAGGTGATGCTTAGAAA...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAACATGTCCTCCAGCATTaGCAGCTCCTCCCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKHVLQH*QLLPVG
Trigger: ACCTACGGGGAGGAGCTGGCAATGCTGGAGGACATG...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAACTCTCGGCCAGTGTCTaGTGCTCATTGATGCCCACG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKLSASV*CSLMPT
Trigger: CGTGGGCATCAATGAGCAGCAGACACTGGCCGAGAG...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAATGCCATGCTCGTGTTaGAGGATCAGGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLMPCSC*RIRHCS
Trigger: GGAGCAGTGCCTGATCCTGCAACACGAGCATGGCAT...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTAGCAGCAGCCACCTGTaGAGTGGGTTTGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKISSSHL*SGFGGQ
Trigger: CTGCCCGCCAAACCCACTGCACAGGTGGCTGCTGCT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAAAGAGAGGAGCTGCTTaGCTCTGTGCCACACACCCT +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLKRGAA*LCATHP
Trigger: AGGGTGTGTGGCACAGAGGCAAGCAGCTCCTCTCTT...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACACTGAGCATGGCCCATaGACCAAGCAAGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNTEHGP*TKQGAS
Trigger: ACTGGCACCTTGCTTGGTGCATGGGCCATGCTCAGT...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCTGCTCTCGGACCATGTaGCATTTCTTCATAGAAGCA +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSCSRTM*HFFIEA
Trigger: TGCTTCTATGAAGAAATGCCACATGGTCCGAGAGCA...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCGCAATGAAGCGTATTTaGATCGGATTCCTAACGCCT +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSAMKRI*IGFLTP
Trigger: AGGCGTTAGGAATCCGATCCAAATACGCTTCATTGC...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCCCAGCTCACACACTCTaGCTGCATCTTCCTCTAGTA +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAPAHTL*LHLPLV
Trigger: TACTAGAGGAAGATGCAGCCAGAGTGTGTGAGCTGG...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGATGATGGTCTGGTACTaGGTGACAATTTGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMMMVWY*VTIWRR
Trigger: CCGGCGCCAAATTGTCACCCAGTACCAGACCATCAT...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAAAGTGGGAGAGGCCTTaGAGGCAATGTAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLKWERP*RQCSQA
Trigger: GGCCTGACTACATTGCCTCCAAGGCCTCTCCCACTT...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAACCTCCTCAGTCGAAGTaGGAGAGGCCTTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKPPQSK*ERPWRQ
Trigger: TTGCCTCCAAGGCCTCTCCCACTTCGACTGAGGAGG...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTAGCAGGCTCTCGAACTaGGCCAGCAGCCCGATGGTG +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPISRLSN*ASSPMV
Trigger: CACCATCGGGCTGCTGGCCCAGTTCGAGAGCCTGCT...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTAGCAGCATGCCACTCTaGATCTCCCGGGGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPISSMPL*ISRGKA
Trigger: CGCCTTGCCCCGGGAGATCCAGAGTGGCATGCTGCT...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACCATCATAAGGAACACTaGACGGAACCTCTGTTTTAC +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNHHKEH*TEPLFY
Trigger: GTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGATG...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAAATGGAAGTCTCCCATaGTCCCATGTTTACAAACAT +
Preference number: 4 (lower is better)
Translates to: QPAKHKFPSVQPSALSARNGSLP*SHVYKH
Trigger: ATGTTTGTAAACATGGGACCATGGGAGACTTCCATT...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTAGCGCAGCACCAGAATaGCATGCGGAGGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPSAAPE*HAEGGQ
Trigger: CTGCCCTCCCTCCGCATGCCATTCTGGTGCTGCGCT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATACTGTTGGCACAGGATaGGGGGTGGAATCGTATGGA +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNTVGTG*GVESYG
Trigger: TCCATACGATTCCACCCCCCATCCTGTGCCAACAGT...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAAACCCTGTCGTAGCCTaGAGGGCAACAGCTAATAAA +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLNPVVA*RATANK
Trigger: TTTATTAGCTGTTGCCCTCCAGGCTACGACAGGGTT...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAGCCAGCCAATCACGGTaGTGTTACCTACACGGTCAC +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKASQSR*CYLHGH
Trigger: GTGACCGTGTAGGTAACATCACCGTGATTGGCTGGC...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTTGGTCTGGTACTGGGTaGCAATTTGGCGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIWSGTG*QFGAGG
Trigger: GCCTCCGGCGCCAAATTGTCACCCAGTACCAGACCA...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTTGCAGTCGCAGACCGTaGCCAGCTGCCGTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPCSRRP*PAAVSC
Trigger: ACAAGACACGGCAGCTGGTCACGGTCTGCGACTGCA...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAAGCTTGTCCACACGCTaGATGATGCACTCTAGGCTC +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLSLSTR*MMHSRL
Trigger: GAGCCTAGAGTGCATCATTCAGCGTGTGGACAAGCT...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTCAGTTCCACCCTACCTaGTGCCCACCCCCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIQFHPT*CPPPLC
Trigger: ACACAGAGGGGGTGGGCATCAGGTAGGGTGGAACTG...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGCGCTGCTTGCATGCTaGCTTCTGAGTAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPALLAC*LLSRRG
Trigger: CCCCCTCCTACTCAGAAGTCAGCATGCAAGCAGCGC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTACCTTCCCTGCACCTCTaGAAACCCAAAGCTCCTACA +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLPSLHL*KPKAPT
Trigger: TGTAGGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGG...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTACCCACAGAGATGATGTaGTCCATGTTCACAGACGGG +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLPTEMM*SMFTDG
Trigger: CCCGTCTGTGAACATGGATCACATCATCTCTGTGGG...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACATTGTACATTTCCAGTaGGAGGAATTTTTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNIVHFQ*EEFFQG
Trigger: CCCTTGGAAAAATTCCTCTCACTGGAAATGTACAAT...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATAAGGAATCAGGACACTaGAACGAGGTGCACTGCTAC +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNKESGH*NEVHCY
Trigger: GTAGCAGTGCACCTCGTTTCAGTGTCCTGATTCCTT...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAGACTCAACAGGAAACTaGAGCGCAGCACCAGAATGG +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLDSTGN*SAAPEW
Trigger: CCATTCTGGTGCTGCGCTTCAGTTTCCTGTTGAGTC...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATTACAGGTTCAGTGGCTaGTTGATGGGATGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNYRFSG*LMGCGG
Trigger: TCCTCCACATCCCATCAATCAGCCACTGAACCTGTA...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACTGGACAGGACATGCATaGAAGAATCTTCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNWTGHA*KNLHSQ
Trigger: TTGACTATGAAGATTCTTTCATGCATGTCCTGTCCA...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCTCTAGCGATGGAGTATaGAGCTCACTGCAAGCTAAG +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTASSDGV*SSLQAK
Trigger: CTTAGCTTGCAGTGAGCTGCATACTCCATCGCTAGA...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTACCTTGGCAGTGTGCTaGTGGCGCCCCAATGGTGAC +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPITLAVC*WRPNGD
Trigger: GTCACCATTGGGGCGCCAGCAGCACACTGCCAAGGT...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGCTCCTCCCCGTAGGTaGTCAGCAGGCTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIAPPRR*SAGSRT
Trigger: AGTTCGAGAGCCTGCTGAGCACCTACGGGGAGGAGC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTGCAGGCACGTCTGACTaGGAGACCGAGGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIAGTSD*ETEAGN
Trigger: ATTGCCTGCCTCGGTCTCGCAGTCAGACGTGCCTGC...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGCAGGCACGTCTGACTaGGAGACCGAGGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPAGTSD*ETEAGN
Trigger: ATTGCCTGCCTCGGTCTCGCAGTCAGACGTGCCTGC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAATGCCATGCTCGTGTTaGAGGATCAGGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKMPCSC*RIRHCS
Trigger: GGAGCAGTGCCTGATCCTGCAACACGAGCATGGCAT...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTTGCGGGGCCATGCCATaGTCGTGTTGCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPICGAMP*SCCRIR
Trigger: CCTGATCCTGCAACACGAGCATGGCATGGCCCCGCA...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTTGCGGGGCCATGCCATaGTCGTGTTGCAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPCGAMP*SCCRIR
Trigger: CCTGATCCTGCAACACGAGCATGGCATGGCCCCGCA...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTAGACCTGCGGGGCCATaGCATGCTCGTGTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPRPAGP*HARVAG
Trigger: TCCTGCAACACGAGCATGGCATGGCCCCGCAGGTCT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACCTGCAGGGAATTAAATaGATATTTGCGACTTCCAAC +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNLQGIK*IFATSN
Trigger: GTTGGAAGTCGCAAATATGCATTTAATTCCCTGCAG...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGGGCAGGAGCTTCTCTaGTTCCTGCCTGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIGQELL*FLPATV
Trigger: CACTGTGGCAGGCAGGAAGCAGAGAAGCTCCTGCCC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAACTGAGCATGGCCCATaGACCAAGCAAGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKTEHGP*TKQGAS
Trigger: ACTGGCACCTTGCTTGGTGCATGGGCCATGCTCAGT...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTTCCACAGGGAGCGTGTaGTTCTGGGCTGGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPSTGSV*FWAGVP
Trigger: AGGAACCCCAGCCCAGAAGCACACGCTCCCTGTGGA...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTATGCTCTCGGACCATGTaGCATTTCTTCATAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLCSRTM*HFFIEA
Trigger: TGCTTCTATGAAGAAATGCCACATGGTCCGAGAGCA...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTTTACCCGGGAAGTGCTaGCACCGAGCCCTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPILPGKC*HRALVH
Trigger: GTGGACTAGGGCTCGGTGCCAGCACTTCCCGGGTAA...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTTTACCCGGGAAGTGCTaGCACCGAGCCCTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKILPGKC*HRALVH
Trigger: GTGGACTAGGGCTCGGTGCCAGCACTTCCCGGGTAA...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGGTTACCATCAGTGGTTaGAAACCGGTACATGCGGCA +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMVTISG*KPVHAA
Trigger: TGCCGCATGTACCGGTTTCCAACCACTGATGGTAAC...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCGGGGTATGTAGATTATaGACTGGCAGCCAGATGATG +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAGVCRL*TGSQMM
Trigger: CATCATCTGGCTGCCAGTCCATAATCTACATACCCC...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACTCTTGTCTGCCAAGATaGCGAGTGTCCTCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNSCLPR*RVSSQG
Trigger: GCCTTGAGAGGACACTCGCCATCTTGGCAGACAAGA...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGCCCATGGATGGAGTTaGCCAGGAGCTTGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPAHGWS*PGACSR
Trigger: GCGACTGCAAGCTCCTGGCCAACTCCATCCATGGGC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGCAGCGTTCAGCCCATaGATGGAGTTGGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIAAFSP*MELARS
Trigger: GCTCCTGGCCAACTCCATCCATGGGCTGAACGCTGC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAACTCACTCCATTCACCTaGGCTGGACTCTTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKLTPFT*AGLFRR
Trigger: CCTCCTGAAGAGTCCAGCCCAGGTGAATGGAGTGAG...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTTCAGGTAGGTGGCTATaGTGGGCGCGCTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPSGRWL*WARCPA
Trigger: TGCAGGACAGCGCGCCCACCATAGCCACCTACCTGA...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTAAACCGCAGCAGCTCTaGCAGGCACGTCTGACTGCG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPKPQQL*QARLTA
Trigger: CGCAGTCAGACGTGCCTGCCAGAGCTGCTGCGGTTT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACGTGGCCCCAACTATGTaGGGTACCTTGCAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNVAPTM*GTLQVL
Trigger: TAACACCTGCAAGGTACCCCACATAGTTGGGGCCAC...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGATGCCTCAGCACCCCTaGCCCAAGTTTGTTACATGT +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMMPQHP*PKFVTC
Trigger: ACATGTAACAAACTTGGGCCAGGGGTGCTGAGGCAT...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCCATCATAAGGAACACTaGACGGAACCTCTGTTTTAC +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSHHKEH*TEPLFY
Trigger: GTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGATG...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGGGTCCAGTCACAGGCTaGTCACATAGAACTAGTCCT +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMGPVTG*SHRTSP
Trigger: AGGACTAGTTCTATGTGACCAGCCTGTGACTGGACC...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGGTCCAGTCACAGGCTaGTCACATAGAACTAGTCCT +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNGPVTG*SHRTSP
Trigger: AGGACTAGTTCTATGTGACCAGCCTGTGACTGGACC...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGAATGCCCAAGAACAATaGTCCAGTCACAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMNAQEQ*SSHRLV
Trigger: GACCAGCCTGTGACTGGACCATTGTTCTTGGGCATT...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATAATGCCCAAGAACAATaGTCCAGTCACAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNNAQEQ*SSHRLV
Trigger: GACCAGCCTGTGACTGGACCATTGTTCTTGGGCATT...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACATGCCCACAAGGACATaGCTGTCCCATATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNMPTRT*LSHMSH
Trigger: GTGGGACATATGGGACAGCCATGTCCTTGTGGGCAT...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAATCCCAGGAACACGATaGCATGTGAGGCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLIPGTR*HVRPVP
Trigger: AGGAACTGGCCTCACATGCCATCGTGTTCCTGGGAT...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTGGGGGTGGAATCGTATaGAGGGTGCAGCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIGGGIV*RVQPQA
Trigger: AGCCTGAGGCTGCACCCTCCATACGATTCCACCCCC...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCGAGATACAGGTTCAGTaGCTGATTGATGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAEIQVQ*LIDGMW
Trigger: CCACATCCCATCAATCAGCCACTGAACCTGTATCTC...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCACATGGATGGAAATTATaGGATGGTTCTCAAGAGATA +
Preference number: 4 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSHGWKL*DGSQEI
Trigger: TATCTCTTGAGAACCATCCCATAATTTCCATCCATG...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACTTGATAAGAGAGTCTTaGAAGAAGGCAATACTGCTT +
Preference number: 4 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNLIRES*KKAILL
Trigger: AAGCAGTATTGCCTTCTTTCAAGACTCTCTTATCAA...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTAGGGGTCTTCTGGTCTaGTCCAGTAGGCGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPRGLLV*SSRRGC
Trigger: ACAGCCACGCCTACTGGATCAGACCAGAAGACCCCT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000074304.9
ENST00000409851.8
CDS-3UTR TCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTGCGCTGGAAGTGGCCTaGGTGACTTTGAAGGTCACG +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIALEVA*VTLKVT
Trigger: CGTGACCTTCAAAGTCACTCAGGCCACTTCCAGCGC...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTACACATGCAAAACTGCTaGCAGATGATCAACATTTGC +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLHMQNC*QMINIC
Trigger: GCAAATGTTGATCATCTGTCAGCAGTTTTGCATGTG...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCAATGGCTACCATTTATaGACACGTACTTCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTANGYHL*TRTSEA
Trigger: CGCCTCAGAAGTACGTGTTCATAAATGGTAGCCATT...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGGTTACCCACAGAGATaGTGTGATCCATGTTCACAG +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNGYPQR*CDPCSQ
Trigger: CTGTGAACATGGATCACATCATCTCTGTGGGTAACC...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGAAGCTCACGGTAGCTaGTGTCTGGGCGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPEAHGS*CLGVLT
Trigger: TGTCAGGACGCCCAGACATCAGCTACCGTGAGCTTC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGAAGCTCACGGTAGCTaGTGTCTGGGCGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIEAHGS*CLGVLT
Trigger: TGTCAGGACGCCCAGACATCAGCTACCGTGAGCTTC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAGGTCACACTGCCCACTaGGAGACATCTACTGCTCAT +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKGHTAH*ETSTAH
Trigger: ATGAGCAGTAGATGTCTCTCAGTGGGCAGTGTGACC...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTATACAGGTTCAGTGGCTaGTTGATGGGATGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLYRFSG*LMGCGG
Trigger: TCCTCCACATCCCATCAATCAGCCACTGAACCTGTA...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTATCTCCTTTGACCTTTTaGATTTGGCTCGTGATGCAT +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLSPLTF*IWLVMH
Trigger: ATGCATCACGAGCCAAATTCAAAAGGTCAAAGGAGA...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGTCTAGCGATGGAGTATaGAGCTCACTGCAAGCTAAG +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMSSDGV*SSLQAK
Trigger: CTTAGCTTGCAGTGAGCTGCATACTCCATCGCTAGA...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTCCGGGTTACCTTTCTTaGTGGTGCAGCTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPPGYLS*WCSCLH
Trigger: GTGCAGGCAGCTGCACCAGCAAGAAAGGTAACCCGG...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000074304.9
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTTTGAAGAGGACGGGCTaGACTCGCAGCAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPILKRTG*TRSSMP
Trigger: TGGCATGCTGCTGCGAGTGCAGCCCGTCCTCTTCAA...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTCTCTCGGCCAGTGTCTaGTGCTCATTGATGCCCACG +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPILSASV*CSLMPT
Trigger: CGTGGGCATCAATGAGCAGCAGACACTGGCCGAGAG...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTTTCGACAACCCTCACTaGGCATGCACTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIFDNPH*ACTPGP
Trigger: AGGCCCTGGAGTGCATGCGCAGTGAGGGTTGTCGAA...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAAGACATTTTCCTCCCTaGAGGCATCGGGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKRHFPP*RHRETA
Trigger: TGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCT...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGGGACCTGGTCTGTGTaGTCCCAAAGTCCGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIGTWSV*SQSPCS
Trigger: AGAGCACGGACTTTGGGAGCACACAGACCAGGTCCC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACCACAGTGGTGCAAGATaGAGTCCTGGTGACGATGAA +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNHSGAR*SPGDDE
Trigger: TTCATCGTCACCAGGACTGCATCTTGCACCACTGTG...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGACACTGAAACGAGGTaGACTGCTACCATCAATGAG +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNDTETR*TATINE
Trigger: CTCATTGATGGTAGCAGTGCACCTCGTTTCAGTGTC...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACCCAAAGAGGTCACACTaGCCACTGAGAGACATCTAC +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNPKRSH*PLRDIY
Trigger: GTAGATGTCTCTCAGTGGGCAGTGTGACCTCTTTGG...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTTGCCAGAGGCCGCGCTaGTTGGTGTTCACAGGAATG +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKICQRPR*LVFTGM
Trigger: CATTCCTGTGAACACCAAGCAGCGCGGCCTCTGGCA...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGAAGCTACTCTCCGTTTaGCTACTGTTGGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMKLLSV*LLLAQD
Trigger: ATCCTGTGCCAACAGTAGGCAAACGGAGAGTAGCTT...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAAAAGTGGCAGTAGCCTaGACATGTTTGCTCTCGGAC +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLKVAVA*TCLLSD
Trigger: GTCCGAGAGCAAACATGTCCAGGCTACTGCCACTTT...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGTCACAGGGGGCCGTTaGTCTGACTTCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIVTGGR*SDFSSI
Trigger: GATGGAGGAGAAGTCAGACCAACGGCCCCCTGTGAC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCAATGGTTACCATCAGTaGTTGGAAACCGGTACATGC +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTANGYHQ*LETGTC
Trigger: GCATGTACCGGTTTCCAACCACTGATGGTAACCATT...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGTCCAGGATCCGCAAATaGTTACCATCAGTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMSRIRK*LPSVVG
Trigger: TCCAACCACTGATGGTAACCATTTGCGGATCCTGGA...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTTACTGGGTGACAATTTaGCGCCGGAGGCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIYWVTI*RRRLSQ
Trigger: CTGGGAGAGCCTCCGGCGCCAAATTGTCACCCAGTA...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGGGGGTATGTAGATTATaGACTGGCAGCCAGATGATG +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMGVCRL*TGSQMM
Trigger: CATCATCTGGCTGCCAGTCCATAATCTACATACCCC...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAATCTTGTCTGCCAAGATaGCGAGTGTCCTCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKSCLPR*RVSSQG
Trigger: GCCTTGAGAGGACACTCGCCATCTTGGCAGACAAGA...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTCGTTCAGCCCATGGATaGAGTTGGCCAGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPRSAHG*SWPGAC
Trigger: GCAAGCTCCTGGCCAACTCCATCCATGGGCTGAACG...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAGCCATGAGGGTGTCCTaGTCATTTCTAAGCATCACC +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLAMRVS*SFLSIT
Trigger: GGTGATGCTTAGAAATGACCAGGACACCCTCATGGC...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAACAGAAGGGGTCTTCTaGTCTGATCCAGTAGGCGTG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKTEGVF*SDPVGV
Trigger: CACGCCTACTGGATCAGACCAGAAGACCCCTTCTGT...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000074304.9
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTTCCATTCACCTGGGCTaGACTCTTCAGGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKISIHLG*TLQEGD
Trigger: GTCCCCCTCCTGAAGAGTCCAGCCCAGGTGAATGGA...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAGAGGCCTGTAATGCTTaGGGAAAGCCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKEACNA*GKPSAA
Trigger: TGCAGCTGAAGGCTTTCCCCAAGCATTACAGGCCTC...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGGGCAGAACCAGGATTaGGACCTGGTCTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPGQNQD*DLVCVL
Trigger: GAGCACACAGACCAGGTCCCAATCCTGGTTCTGCCC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCTCATACAACGAGGACTaGGTTACCCACAGAGATGAT +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTASYNED*VTHRDD
Trigger: ATCATCTCTGTGGGTAACCCAGTCCTCGTTGTATGA...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGCCAGGAGGAACTGCTaGTCTTGGAAGAGCCATCCC +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPARRNC*SWKSHP
Trigger: GGGATGGCTCTTCCAAGACCAGCAGTTCCTCCTGGC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATAAGACAGGGTTCCAGTaGAGGGAATCTAGAGTATGG +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNKTGFQ*RESRVW
Trigger: CCATACTCTAGATTCCCTCCACTGGAACCCTGTCTT...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGCCTTGGGGGAGAGTCTaGGATGGACCTAGAAATTTA +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMPWGRV*DGPRNL
Trigger: TAAATTTCTAGGTCCATCCCAGACTCTCCCCCAAGG...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
3UTR CAA 72 bp TACCACACTCTGCCATTTGCCTTCTCCTTTGACCTTTaGAATTTGGCTCGTGATGCATTTAGCGTAACCGAT +
Preference number: 4 (lower is better)
Translates to: YHTLPFAFSFDL*NLARDAFSVTD
Trigger: ATCGGTTACGCTAAATGCATCACGAGCCAAATTCAAAAGGTCAAAGGAGAAGGCAAATGGCAGAGTGTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCTTGATAAGAGAGTCTTaGAAGAAGGCAATACTGCTT +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSLIRES*KKAILL
Trigger: AAGCAGTATTGCCTTCTTTCAAGACTCTCTTATCAA...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCCCTGAGATCTATCTTTaGCATCATACACGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAPEIYL*HHTRRV
Trigger: AACTCTCCGTGTATGATGTCAAAGATAGATCTCAGG...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTCTGGCGCCCCAATGGTaGCGATGTCGTAGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKILAPQW*RCRSSD
Trigger: ATCAGAACTACGACATCGTCACCATTGGGGCGCCAG...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAATTTGCGGAGACCTCCTaGCTTAAAACCTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKFAETS*LKTLAV
Trigger: CACTGCCAAGGTTTTAAGTCAGGAGGTCTCCGCAAA...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCTGGTGTTCACAGGAATaGAAGATCTTTTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAWCSQE*KIFLVS
Trigger: GCTGACCAAAAAGATCTTTCATTCCTGTGAACACCA...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGGAAGATCATCTTAAGTaGGAAAGGGAACCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMEDHLK*EREPRR
Trigger: TCTCCTGGGTTCCCTTTCTCACTTAAGATGATCTTC...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACAGGGCTGTGCTCTCTTaGTGTCATGATGTCATTGGT +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNRAVLS*CHDVIG
Trigger: ACCAATGACATCATGACAGCAAGAGAGCACAGCCCT...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTCCATGGCGAGGGCTGTaGTCTCTTGCTGTCATGATG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPPWRGL*SLAVMM
Trigger: CATCATGACAGCAAGAGAGCACAGCCCTCGCCATGG...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTTTGGAAACCGGTACATaGGGCAGATGGCACCACCGA +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPILETGT*GRWHHR
Trigger: TCGGTGGTGCCATCTGCCGCATGTACCGGTTTCCAA...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGTGCTTTCAAACTGCTTaGTTTAAACGAGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMCFQTA*FKRGPS
Trigger: AGAGGGCCCTCGTTTAAAGCAAGCAGTTTGAAAGCA...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTAAAACCTTGGCAGTGTaGTGCTGGCGCCCCAATGGT +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPKTLAV*CWRPNG
Trigger: ACCATTGGGGCGCCAGCAGCACACTGCCAAGGTTTT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTCTGCCGTGTCTTGTCTaGCAAGATGGCGAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKILPCLV*QDGECP
Trigger: AGGACACTCGCCATCTTGGCAGACAAGACACGGCAG...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTTCGTGCCAGTCCACCTaGAGGGAAGATCGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPISCQST*REDRLF
Trigger: AAACAGCCGATCTTCCCTGCAGGTGGACTGGCACGA...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTTCGGCCAGTGTCTGCTaGTCATTGATGCCCACGTTG +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPISASVC*SLMPTL
Trigger: CAACGTGGGCATCAATGAGCAGCAGACACTGGCCGA...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAACAGATCTCAGCAGCTTaGCAGAGAATGTCGACGTTC +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKQISAA*QRMSTF
Trigger: GAACGTCGACATTCTCTGGCAAGCTGCTGAGATCTG...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTTGCAGGATCAGGCACTaGTCCAGTGTCACCGACATG +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPICRIRH*SSVTDM
Trigger: CATGTCGGTGACACTGGAGCAGTGCCTGATCCTGCA...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTTGCAGGATCAGGCACTaGTCCAGTGTCACCGACATG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPCRIRH*SSVTDM
Trigger: CATGTCGGTGACACTGGAGCAGTGCCTGATCCTGCA...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATGCCATGCTCGTGTTaGAGGATCAGGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPMPCSC*RIRHCS
Trigger: GGAGCAGTGCCTGATCCTGCAACACGAGCATGGCAT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTACTGCAGGGAATTAAATaGATATTTGCGACTTCCAAC +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLLQGIK*IFATSN
Trigger: GTTGGAAGTCGCAAATATGCATTTAATTCCCTGCAG...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCGGGAAAGCCTTCAGCTaGAGGGAATTAAATGCATAT +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAGKAFS*RELNAY
Trigger: ATATGCATTTAATTCCCTGCAGCTGAAGGCTTTCCC...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCCTAAGAAACAAACTCTaGTATGTGCAGATAAGACTC +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSLRNKL*YVQIRL
Trigger: GAGTCTTATCTGCACATAGCAGAGTTTGTTTCTTAG...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTAAGAGAGGAGCTGCTTaGCTCTGTGCCACACACCCT +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIKRGAA*LCATHP
Trigger: AGGGTGTGTGGCACAGAGGCAAGCAGCTCCTCTCTT...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAGAGCACTCAATGCAATaGCCAAGAACAATGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLEHSMQ*PRTMVQ
Trigger: CTGGACCATTGTTCTTGGGCATTGCATTGAGTGCTC...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTCCTGCCAGGAGGAACTaGTGGTCTTGGAAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIPARRN*WSWKSH
Trigger: ATGGCTCTTCCAAGACCAGCAGTTCCTCCTGGCAGG...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTCATCAGGAGGTCAGTTaGAGCCAGGGCCACTATTGG +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIHQEVS*SQGHYW
Trigger: CCAATAGTGGCCCTGGCTGCAACTGACCTCCTGATG...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGAATCGTATGGAGGGTaGAGCCTCAGGCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIESYGG*SLRLEK
Trigger: CTTCTCCAGCCTGAGGCTGCACCCTCCATACGATTC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGGTACATGCGGCAGATaGCACCACCGAACACCGATT +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPGTCGR*HHRTPI
Trigger: AATCGGTGTTCGGTGGTGCCATCTGCCGCATGTACC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTCCTGACTTAAAACCTTaGCAGTGTGCTGCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPPDLKP*QCAAGA
Trigger: GGCGCCAGCAGCACACTGCCAAGGTTTTAAGTCAGG...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAATTCAGGGTGTTGATCTaGGCGATGATCTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKFRVLI*AMISLA
Trigger: AGCCAAGGAGATCATCGCCCAGATCAACACCCTGAA...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTAAGTGGGAGAGGCCTTaGAGGCAATGTAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIKWERP*RQCSQA
Trigger: GGCCTGACTACATTGCCTCCAAGGCCTCTCCCACTT...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTAAGTGGGAGAGGCCTTaGAGGCAATGTAGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIKWERP*RQCSQA
Trigger: GGCCTGACTACATTGCCTCCAAGGCCTCTCCCACTT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTGGTTACCTTTCTTGCTaGTGCAGCTGCCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIGYLSC*CSCLHR
Trigger: CCTGTGCAGGCAGCTGCACCAGCAAGAAAGGTAACC...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000074304.9
ENST00000409851.8
CDS-3UTR CCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTAGCGCAAAGCCTCCCTaGGACAACTCCCCTAGATCT +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPSAKPP*DNSPRS
Trigger: AGATCTAGGGGAGTTGTCCCAGGGAGGCTTTGCGCT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTTTTCAGGCTACACCCTaGGAACCCTGTCGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIFQATP*EPCRSL
Trigger: CAGGCTACGACAGGGTTCCCAGGGTGTAGCCTGAAA...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCATGGAAATTATGGGATaGTTCTCAAGAGATACAGGT +
Preference number: 4 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSMEIMG*FSRDTG
Trigger: ACCTGTATCTCTTGAGAACCATCCCATAATTTCCAT...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACATACAGACCAGGCCTTaGGGTGCATGGATGGAAATT +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNIQTRP*GAWMEI
Trigger: AATTTCCATCCATGCACCCCAAGGCCTGGTCTGTAT...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACGATCCTCCATCGTCTTaGACTCTCATCCTTTGTATG +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNDPPSS*TLILCM
Trigger: CATACAAAGGATGAGAGTTCAAGACGATGGAGGATC...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTCAATGTGTGGTCAGATaGGGATGGCATGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPQCVVR*GWHAVE
Trigger: CTCCACTGCATGCCATCCTCATCTGACCACACATTG...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000074304.9
ENST00000409851.8
CDS-3UTR TCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTCGTTCCTCAAGTCCATaGTCCCAAGGCTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPRSSSP*SQGSCP
Trigger: AGGACATGAGCCTTGGGATCATGGACTTGAGGAACG...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTATTGACATGCCACATCTaGGGCCCTACATTAACATCT +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLLTCHI*GPTLTS
Trigger: AGATGTTAATGTAGGGCCTCAGATGTGGCATGTCAA...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAGAGATGGTGGAGAGGTaGAAGGGTAAATCAGCCATA +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKEMVER*KGKSAI
Trigger: TATGGCTGATTTACCCTTTCACCTCTCCACCATCTC...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTCCGGAAGCCCAGGAATaGTGCCTTCAGAGAGAATAC +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIPEAQE*CLQREY
Trigger: GTATTCTCTCTGAAGGCATCATTCCTGGGCTTCCGG...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTCCCACAGAGATGATGTaGTCCATGTTCACAGACGGG +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIPTEMM*SMFTDG
Trigger: CCCGTCTGTGAACATGGATCACATCATCTCTGTGGG...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCATTGTACATTTCCAGTaGGAGGAATTTTTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAIVHFQ*EEFFQG
Trigger: CCCTTGGAAAAATTCCTCTCACTGGAAATGTACAAT...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGATGTCTGGGCGTCCTaGCATGTCTTCTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPDVWAS*HVFFLA
Trigger: AGCCAAGAAGAAGACATGTCAGGACGCCCAGACATC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCTGGACAGGACATGCATaGAAGAATCTTCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAWTGHA*KNLHSQ
Trigger: TTGACTATGAAGATTCTTTCATGCATGTCCTGTCCA...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGCAAGATAACATTGCCTaGACCCCCTGTAATTTTAGC +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMQDNIA*TPCNFS
Trigger: GCTAAAATTACAGGGGGTTCAGGCAATGTTATCTTG...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAAGGGCTGTGCTCTCTTaGTGTCATGATGTCATTGGT +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKRAVLS*CHDVIG
Trigger: ACCAATGACATCATGACAGCAAGAGAGCACAGCCCT...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAGTCTTGTATATTTCCTaGCAGAGAGAGGCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKVLYIS*QREAQH
Trigger: ATGCTGGGCCTCTCTCTGGCAGGAAATATACAAGAC...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGACTTCTCCTCCATCTaGCAGCCAATCACGGTGATG +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIDFSSI*QPITVM
Trigger: CATCACCGTGATTGGCTGGCAGATGGAGGAGAAGTC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAATTTCTAAGCATCACCTaGTCCTCCTCAGTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKFLSIT*SSSVEV
Trigger: CACTTCGACTGAGGAGGAGCAGGTGATGCTTAGAAA...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTAGGAAGCCGTCGTCATaGAGGCAGTTCCTCAGCTTA +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPRKPSS*RQFLSL
Trigger: TAAGCTGAGGAACTGCCTGCATGACGACGGCTTCCT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATCTATGTGGGGTACCTTaGAGGTGTTACCTTCTAATA +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNLCGVP*RCYLLI
Trigger: TATTAGAAGGTAACACCTGCAAGGTACCCCACATAG...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTAGACATTTTCCTCCCTaGAGGCATCGGGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIRHFPP*RHRETA
Trigger: TGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAATTCCCTTTGATGAGTaGAGATATTTAATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLIPFDE*RYLMLS
Trigger: GGAGAGCATTAAATATCTGCACTCATCAAAGGGAAT...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTACAGAAGAGAGGAGCTaGTTGCCTCTGTGCCACACA +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKITEERS*LPLCHT
Trigger: TGTGTGGCACAGAGGCAAGCAGCTCCTCTCTTCTGT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAGAGCACTCAATGCAATaGCCAAGAACAATGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKEHSMQ*PRTMVQ
Trigger: CTGGACCATTGTTCTTGGGCATTGCATTGAGTGCTC...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAATGCACAGCAGAGCAGTaGCCTCACTATAACTTACAG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKCTAEQ*PHYNLQ
Trigger: CTGTAAGTTATAGTGAGGGCACTGCTCTGCTGTGCA...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAAAGCTACTCTCCGTTTaGCTACTGTTGGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKKLLSV*LLLAQD
Trigger: ATCCTGTGCCAACAGTAGGCAAACGGAGAGTAGCTT...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGACCAGGCCTTGGGGTaGATGGATGGAAATTATGGG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPDQALG*MDGNYG
Trigger: CCCATAATTTCCATCCATGCACCCCAAGGCCTGGTC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAGCAATGAAGCGTATTTaGATCGGATTCCTAACGCCT +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLAMKRI*IGFLTP
Trigger: AGGCGTTAGGAATCCGATCCAAATACGCTTCATTGC...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCAATGGAAGTCTCCCATaGTCCCATGTTTACAAACAT +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTANGSLP*SHVYKH
Trigger: ATGTTTGTAAACATGGGACCATGGGAGACTTCCATT...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACAGGGAATCTAGAGTATaGGTGTTTTCAGGCTACACC +
Preference number: 4 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNRESRV*VFSGYT
Trigger: GGTGTAGCCTGAAAACACCCATACTCTAGATTCCCT...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAAGTGTCCTTTCGCAATaGAGCGTATTTGGATCGGAT +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKSVLSQ*SVFGSD
Trigger: ATCCGATCCAAATACGCTTCATTGCGAAAGGACACT...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTTGTCCACACGCTGAATaGTGCACTCTAGGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPCPHAE*CTLGSC
Trigger: ACAAGAGCCTAGAGTGCATCATTCAGCGTGTGGACA...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATTACTATCCACACTATTaGGCCAAACATTACCTCCTA +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNYYPHY*AKHYLL
Trigger: TAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTA...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGGAGCAAGCAGGCATTTaGAAAAGTCTTCTAGCATTT +
Preference number: 4 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMEQAGI*KSLLAF
Trigger: AAATGCTAGAAGACTTTTTCAAATGCCTGCTTGCTC...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAGTCCTCCTAATAGGATaGATCAGGCAAGACCACATT +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKVLLIG*IRQDHI
Trigger: AATGTGGTCTTGCCTGATTCATCCTATTAGGAGGAC...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAAATGGCTACCATTTATaGACACGTACTTCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKNGYHL*TRTSEA
Trigger: CGCCTCAGAAGTACGTGTTCATAAATGGTAGCCATT...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTAAATAACCAGGGTCTCTaGGAAGAGGGCACTTTTAAA +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLNNQGL*EEGTFK
Trigger: TTTAAAAGTGCCCTCTTCTCAGAGACCCTGGTTATT...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAATCATTGGTGATGATGTaGTTCTTGATCCTCGGTCAG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKSLVMM*FLILGQ
Trigger: CTGACCGAGGATCAAGAAGCACATCATCACCAATGA...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATCTGCAGGGAATTAAATaGATATTTGCGACTTCCAAC +
Preference number: 4 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNLQGIK*IFATSN
Trigger: GTTGGAAGTCGCAAATATGCATTTAATTCCCTGCAG...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTCTAAAGGGACCTTACTaGTGGCTTTGTGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPLKGPY*WLCVSS
Trigger: GCTGGAGACACAAAGCCAGCAGTAAGGTCCCTTTAG...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTCACCCGAGCACTCAATaGAATGCCCAAGAACAATGG +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIHPSTQ*NAQEQW
Trigger: CCATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTG...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTCACAGTGGTGCAAGATaGAGTCCTGGTGACGATGAA +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIHSGAR*SPGDDE
Trigger: TTCATCGTCACCAGGACTGCATCTTGCACCACTGTG...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAATGCTGTATTTGAGATaGCTGCAAGACAGGCATGGT +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKMLYLR*LQDRHG
Trigger: ACCATGCCTGTCTTGCAGGCATCTCAAATACAGCAT...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAATGCTCTCGGACCATGTaGCATTTCTTCATAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKCSRTM*HFFIEA
Trigger: TGCTTCTATGAAGAAATGCCACATGGTCCGAGAGCA...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTAAAGTGGCAGTAGCCTaGACATGTTTGCTCTCGGAC +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIKVAVA*TCLLSD
Trigger: GTCCGAGAGCAAACATGTCCAGGCTACTGCCACTTT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTAAAGTGGCAGTAGCCTaGACATGTTTGCTCTCGGAC +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPKVAVA*TCLLSD
Trigger: GTCCGAGAGCAAACATGTCCAGGCTACTGCCACTTT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGTTACCATCAGTGGTTaGAAACCGGTACATGCGGCA +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIVTISG*KPVHAA
Trigger: TGCCGCATGTACCGGTTTCCAACCACTGATGGTAAC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATGCCTCAGCACCCCTaGCCCAAGTTTGTTACATGT +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPMPQHP*PKFVTC
Trigger: ACATGTAACAAACTTGGGCCAGGGGTGCTGAGGCAT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTAATGCCCAAGAACAATaGTCCAGTCACAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKINAQEQ*SSHRLV
Trigger: GACCAGCCTGTGACTGGACCATTGTTCTTGGGCATT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCCATGGATGGAAATTATaGGATGGTTCTCAAGAGATA +
Preference number: 4 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAHGWKL*DGSQEI
Trigger: TATCTCTTGAGAACCATCCCATAATTTCCATCCATG...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTAGGCCTTGGGGTGCATaGATGGAAATTATGGGATGG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPRPWGA*MEIMGW
Trigger: CCATCCCATAATTTCCATCCATGCACCCCAAGGCCT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTATACTATCCACACTATTaGGCCAAACATTACCTCCTA +
Preference number: 4 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLYYPHY*AKHYLL
Trigger: TAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTA...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTGGTTACCCACAGAGATaGTGTGATCCATGTTCACAG +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIGYPQR*CDPCSQ
Trigger: CTGTGAACATGGATCACATCATCTCTGTGGGTAACC...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAATTTGCCTTCTCCTTTaGCCTTTTGAATTTGGCTCG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKICLLL*PFEFGS
Trigger: CGAGCCAAATTCAAAAGGTCAAAGGAGAAGGCAAAT...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTGTCTTGTATATTTCCTaGCAGAGAGAGGCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIVLYIS*QREAQH
Trigger: ATGCTGGGCCTCTCTCTGGCAGGAAATATACAAGAC...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGTCTTGTATATTTCCTaGCAGAGAGAGGCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPVLYIS*QREAQH
Trigger: ATGCTGGGCCTCTCTCTGGCAGGAAATATACAAGAC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTTCTAGCGATGGAGTATaGAGCTCACTGCAAGCTAAG +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPISSDGV*SSLQAK
Trigger: CTTAGCTTGCAGTGAGCTGCATACTCCATCGCTAGA...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTACGCTGTTGCCCCTCTaGTTCAAATTAGGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKITLLPL*FKLGRN
Trigger: GTTTCTGCCTAATTTGAAGCAGAGGGGCAACAGCGT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTTTGGAGCCATGGAGATaGAAGTGTGTTTCCTACCCT +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPILEPWR*KCVSYP
Trigger: AGGGTAGGAAACACACTTGCATCTCCATGGCTCCAA...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTAGCGGGCATTACACTTaGTCTTGTGAATACAGAGGG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPSGHYT*SCEYRG
Trigger: CCCTCTGTATTCACAAGAGCAAGTGTAATGCCCGCT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTAGCGGGCATTACACTTaGTCTTGTGAATACAGAGGG +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPISGHYT*SCEYRG
Trigger: CCCTCTGTATTCACAAGAGCAAGTGTAATGCCCGCT...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTTCCAGGATCCGCAAATaGTTACCATCAGTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPSRIRK*LPSVVG
Trigger: TCCAACCACTGATGGTAACCATTTGCGGATCCTGGA...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGAGATACAGGTTCAGTaGCTGATTGATGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIEIQVQ*LIDGMW
Trigger: CCACATCCCATCAATCAGCCACTGAACCTGTATCTC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGATCCTCCATCGTCTTaGACTCTCATCCTTTGTATG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPDPPSS*TLILCM
Trigger: CATACAAAGGATGAGAGTTCAAGACGATGGAGGATC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAGTTATTCTCACTGCATaGGATAGTGCTAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKVILTA*DSASFF
Trigger: AAAGAAGCTAGCACTATCTCATGCAGTGAGAATAAC...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTTGCTTTCAAACTGCTTaGTTTAAACGAGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKICFQTA*FKRGPS
Trigger: AGAGGGCCCTCGTTTAAAGCAAGCAGTTTGAAAGCA...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTAATGGTTACCATCAGTaGTTGGAAACCGGTACATGC +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPNGYHQ*LETGTC
Trigger: GCATGTACCGGTTTCCAACCACTGATGGTAACCATT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAAATGGAAGTCTCCCATaGTCCCATGTTTACAAACAT +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKNGSLP*SHVYKH
Trigger: ATGTTTGTAAACATGGGACCATGGGAGACTTCCATT...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGTGAGAAAAACAGCGTaGTCCAGTGCTGAAATAGGA +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIVRKTA*SSAEIG
Trigger: TCCTATTTCAGCACTGGACCACGCTGTTTTTCTCAC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTCCTGAGATCTATCTTTaGCATCATACACGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIPEIYL*HHTRRV
Trigger: AACTCTCCGTGTATGATGTCAAAGATAGATCTCAGG...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTTGGTGTTCACAGGAATaGAAGATCTTTTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIWCSQE*KIFLVS
Trigger: GCTGACCAAAAAGATCTTTCATTCCTGTGAACACCA...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTAGCGTGGTCCAGTGCTaGAATAGGAAATATTTCAGT +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPISVVQC*NRKYFS
Trigger: ACTGAAATATTTCCTATTTCAGCACTGGACCACGCT...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGTCTCTTCAAATTTGTaGAGCTTTTTGCGGAGACCT +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIVSSNL*SFLRRP
Trigger: AGGTCTCCGCAAAAAGCTGCACAAATTTGAAGAGAC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGGGAAAGCCTTCAGCTaGAGGGAATTAAATGCATAT +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIGKAFS*RELNAY
Trigger: ATATGCATTTAATTCCCTGCAGCTGAAGGCTTTCCC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGGGAAAGCCTTCAGCTaGAGGGAATTAAATGCATAT +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPGKAFS*RELNAY
Trigger: ATATGCATTTAATTCCCTGCAGCTGAAGGCTTTCCC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTCTATGTGGGGTACCTTaGAGGTGTTACCTTCTAATA +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPILCGVP*RCYLLI
Trigger: TATTAGAAGGTAACACCTGCAAGGTACCCCACATAG...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTCTATGTGGGGTACCTTaGAGGTGTTACCTTCTAATA +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPLCGVP*RCYLLI
Trigger: TATTAGAAGGTAACACCTGCAAGGTACCCCACATAG...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR CAA 72 bp GATTTTATCCACTGTAAATTTGATTACTTCCTACTTTaGGAAATAACCAGGGTCTCTGAGAAGAGGGCACTT +
Preference number: 4 (lower is better)
Translates to: DFIHCKFDYFLL*EITRVSEKRAL
Trigger: AAGTGCCCTCTTCTCAGAGACCCTGGTTATTTCCAAAAGTAGGAAGTAATCAAATTTACAGTGGATAAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTTACTATCCACACTATTaGGCCAAACATTACCTCCTA +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPYYPHY*AKHYLL
Trigger: TAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTA...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR TCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTGTTATTCTCACTGCATaGGATAGTGCTAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIVILTA*DSASFF
Trigger: AAAGAAGCTAGCACTATCTCATGCAGTGAGAATAAC...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGTTATTCTCACTGCATaGGATAGTGCTAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIVILTA*DSASFF
Trigger: AAAGAAGCTAGCACTATCTCATGCAGTGAGAATAAC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGTACATTTCCAGTaGGAGGAATTTTTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPIVHFQ*EEFFQG
Trigger: CCCTTGGAAAAATTCCTCTCACTGGAAATGTACAAT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTCTGCTGAGGATACTGTaGGAAACCTCTATTCAAAAA +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPILLRIL*ETSIQK
Trigger: TTTTTGAATAGAGGTTTCTCACAGTATCCTCAGCAG...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTCTGCAGGGAATTAAATaGATATTTGCGACTTCCAAC +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPILQGIK*IFATSN
Trigger: GTTGGAAGTCGCAAATATGCATTTAATTCCCTGCAG...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CCA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAAATGAAAGATCTTTTTaGTCAGCATATACCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKNERSF*SAYTSQ
Trigger: CTGAGAGGTATATGCTGACCAAAAAGATCTTTCATT...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
37% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGCTTTTTCTGTTATGTaGGACAACAGTGTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIAFSVM*DNSVKD
Trigger: GTCTTTCACACTGTTGTCCCACATAACAGAAAAAGC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR TCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTCTTCAGAGAGAATACTaGAACCTGAACCTTTTCTAT +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPLQREY*NLNLFY
Trigger: ATAGAAAAGGTTCAGGTTTCAGTATTCTCTCTGAAG...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTCTAAGAAACAAACTCTaGTATGTGCAGATAAGACTC +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPLRNKL*YVQIRL
Trigger: GAGTCTTATCTGCACATAGCAGAGTTTGTTTCTTAG...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR GCA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTCCCTTTGATGAGTaGAGATATTTAATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPIPFDE*RYLMLS
Trigger: GGAGAGCATTAAATATCTGCACTCATCAAAGGGAAT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
3UTR CAA 72 bp TTTAATTTAAATAGGCAGTTGTTACTATCCACACTATaGAGCCAAACATTACCTCCTATTGATTCCAATGGG +
Preference number: 4 (lower is better)
Translates to: FNLNRQLLLSTL*SQTLPPIDSNG
Trigger: CCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATTAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CCA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTCAAGATGATTCCAGATaGATTGATCTAAATGTAGGA +
Preference number: 4 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIQDDSR*IDLNVG
Trigger: TCCTACATTTAGATCAATCCATCTGGAATCATCTTG...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CCA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTAATGAAAGATCTTTTTaGTCAGCATATACCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SICQVLQFYGDPLHRAKINERSF*SAYTSQ
Trigger: CTGAGAGGTATATGCTGACCAAAAAGATCTTTCATT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS GCA 90 bp CCGCCGCCTGGCTGTGAAGTCGCGGGCTGCGGGCCCGGCCTCAGGTaGTGGTCCTCCTGCCCCGGCCCACGGAGCCCGACCCGGCGGCAA +
Preference number: 5 (lower is better)
Translates to: PPPGCEVAGCGPGLR*WSSCPGPRSPTRRQ
Trigger: TTGCCGCCGGGTCGGGCTCCGTGGGCCGGGGCAGGAGGACCAGCACCTGAGGCCGGGCCCGCAGCCCGCGACTTCACAGCCAGGCGGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS GCA 90 bp CCCGCAGCAGCAGCAGCGCCGCCGCCTGGCTGTGAAGTCGCGGGCTaGGGGCCCGGCCTCAGGTGCTGGTCCTCCTGCCCCGGCCCACGG +
Preference number: 5 (lower is better)
Translates to: PAAAAAPPPGCEVAG*GPGLRCWSSCPGPR
Trigger: CCGTGGGCCGGGGCAGGAGGACCAGCACCTGAGGCCGGGCCCGCAGCCCGCGACTTCACAGCCAGGCGGCGGCGCTGCTGCTGCTGCGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS CCA 90 bp CCGCCTGGCTGTGAAGTCGCGGGCTGCGGGCCCGGCCTCAGGTGCTaGTCCTCCTGCCCCGGCCCACGGAGCCCGACCCGGCGGCAAACC +
Preference number: 5 (lower is better)
Translates to: PPGCEVAGCGPGLRC*SSCPGPRSPTRRQT
Trigger: GGTTTGCCGCCGGGTCGGGCTCCGTGGGCCGGGGCAGGAGGACCAGCACCTGAGGCCGGGCCCGCAGCCCGCGACTTCACAGCCAGGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS GCA 90 bp TGTGAAGTCGCGGGCTGCGGGCCCGGCCTCAGGTGCTGGTCCTCCTaGCCCGGCCCACGGAGCCCGACCCGGCGGCAAACCAGCAGCGAA +
Preference number: 5 (lower is better)
Translates to: CEVAGCGPGLRCWSS*PGPRSPTRRQTSSE
Trigger: TTCGCTGCTGGTTTGCCGCCGGGTCGGGCTCCGTGGGCCGGGGCAGGAGGACCAGCACCTGAGGCCGGGCCCGCAGCCCGCGACTTCACA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS CCA 90 bp TTCCTGCCAGAGAGAGGCCCAGCATGTCGGCCGCCACGTCGATGGTaGAAGCCCGCTGCATTGCACGGGCCCTGGCACCATGGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: FLPERGPACRPPRRW*KPAALHGPWHHGEG
Trigger: GCCCTCGCCATGGTGCCAGGGCCCGTGCAATGCAGCGGGCTTCCACCATCGACGTGGCGGCCGACATGCTGGGCCTCTCTCTGGCAGGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000463367.1
ENST00000523221.1
CDS GCA 90 bp GCCCAGCATGTCGGCCGCCACGTCGATGGTGGAAGCCCGCTGCATTaGACGGGCCCTGGCACCATGGCGAGGGCTGTGCTCTCTTGCTGT +
Preference number: 5 (lower is better)
Translates to: AQHVGRHVDGGSPLH*TGPGTMARAVLSCC
Trigger: ACAGCAAGAGAGCACAGCCCTCGCCATGGTGCCAGGGCCCGTGCAATGCAGCGGGCTTCCACCATCGACGTGGCGGCCGACATGCTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000463367.1
ENST00000523221.1
CDS GCA 90 bp GAGAGGCCCAGCATGTCGGCCGCCACGTCGATGGTGGAAGCCCGCTaGATTGCACGGGCCCTGGCACCATGGCGAGGGCTGTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: ERPSMSAATSMVEAR*IARALAPWRGLCSL
Trigger: AAGAGAGCACAGCCCTCGCCATGGTGCCAGGGCCCGTGCAATGCAGCGGGCTTCCACCATCGACGTGGCGGCCGACATGCTGGGCCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000463367.1
ENST00000523221.1
CDS CCA 90 bp CCCACGTTGAAGAGGACGGGCTGCACTCGCAGCAGCATGCCACTCTaGATCTCCCGGGGCAAGGCGTCAAACAGCGGGCCCGGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: PTLKRTGCTRSSMPL*ISRGKASNSGPGRG
Trigger: CCCTCTGCCGGGCCCGCTGTTTGACGCCTTGCCCCGGGAGATCCAGAGTGGCATGCTGCTGCGAGTGCAGCCCGTCCTCTTCAACGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000467042.1
ENST00000523221.1
CDS GCA 90 bp TGCTCCATGCACTGGGACGCCCCCGCTCCACCTGGCAGCCCTCCCTaGAGTCTGCATGGGGGAGGAGGGCATGGAGTCAGAGACACAGAC +
Preference number: 5 (lower is better)
Translates to: CSMHWDAPAPPGSPP*SLHGGGGHGVRDTD
Trigger: GTCTGTGTCTCTGACTCCATGCCCTCCTCCCCCATGCAGACTGCAGGGAGGGCTGCCAGGTGGAGCGGGGGCGTCCCAGTGCATGGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000468638.1
CDS CCA 90 bp CCCCCTAGTGGCTGTGGCAGCGCCTGCACAGAGAGGCCGGCACTCTaGGACCAGCTTTCCCTCCAAGGTAGGGTCCACCCCTCATTCGCC +
Preference number: 5 (lower is better)
Translates to: PPSGCGSACTERPAL*DQLSLQGRVHPSFA
Trigger: GGCGAATGAGGGGTGGACCCTACCTTGGAGGGAAAGCTGGTCCCAGAGTGCCGGCCTCTCTGTGCAGGCGCTGCCACAGCCACTAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467042.1
CDS GCA 90 bp CAGTTACATGGAAAGGCAACCGGAGACTCCGCTCTCACTGCCTGCTaGTCCATGCACTGGGACGCCCCCGCTCCACCTGGCAGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: QLHGKATGDSALTAC*SMHWDAPAPPGSPP
Trigger: GGGAGGGCTGCCAGGTGGAGCGGGGGCGTCCCAGTGCATGGAGCAGCAGGCAGTGAGAGCGGAGTCTCCGGTTGCCTTTCCATGTAACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468638.1
CDS CCA 90 bp TATTTCCTGCCAGAGAGAGGCCCAGCATGTCGGCCGCCACGTCGATaGTGGAAGCCCGCTGCATTGCACGGGCCCTGGCACCATGGCGAG +
Preference number: 5 (lower is better)
Translates to: YFLPERGPACRPPRR*WKPAALHGPWHHGE
Trigger: CTCGCCATGGTGCCAGGGCCCGTGCAATGCAGCGGGCTTCCACCATCGACGTGGCGGCCGACATGCTGGGCCTCTCTCTGGCAGGAAATA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000463367.1
ENST00000523221.1
CDS CCA 90 bp CCCCGTAGGTGCTCAGCAGGCTCTCGAACTGGGCCAGCAGCCCGATaGTGTAGAGCTGGCGCAGGAAGCCGTCGTCATGCAGGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: PRRCSAGSRTGPAAR*CRAGAGSRRHAGSS
Trigger: GGAACTGCCTGCATGACGACGGCTTCCTGCGCCAGCTCTACACCATCGGGCTGCTGGCCCAGTTCGAGAGCCTGCTGAGCACCTACGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS GCA 90 bp TGGGCTCCAGTTACATGGAAAGGCAACCGGAGACTCCGCTCTCACTaGCTGCTGCTCCATGCACTGGGACGCCCCCGCTCCACCTGGCAG +
Preference number: 5 (lower is better)
Translates to: WAPVTWKGNRRLRSH*LLLHALGRPRSTWQ
Trigger: CTGCCAGGTGGAGCGGGGGCGTCCCAGTGCATGGAGCAGCAGGCAGTGAGAGCGGAGTCTCCGGTTGCCTTTCCATGTAACTGGAGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468638.1
CDS TCA 90 bp CTACCTCCCGTGTTCCAATGCTGCGCATGCACTCCAGGGCCTGGGTaGAGACCTGCGGGGCCATGCCATGCTCGTGTTGCAGGATCAGGC +
Preference number: 5 (lower is better)
Translates to: LPPVFQCCACTPGPG*RPAGPCHARVAGSG
Trigger: GCCTGATCCTGCAACACGAGCATGGCATGGCCCCGCAGGTCTTCACCCAGGCCCTGGAGTGCATGCGCAGCATTGGAACACGGGAGGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409540.7
CDS GCA 90 bp CGCATGCACTCCAGGGCCTGGGTGAAGACCTGCGGGGCCATGCCATaGTCGTGTTGCAGGATCAGGCACTGCTCCAGTGTCACCGACATG +
Preference number: 5 (lower is better)
Translates to: RMHSRAWVKTCGAMP*SCCRIRHCSSVTDM
Trigger: CATGTCGGTGACACTGGAGCAGTGCCTGATCCTGCAACACGAGCATGGCATGGCCCCGCAGGTCTTCACCCAGGCCCTGGAGTGCATGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000498026.1
ENST00000523221.1
CDS GCA 90 bp TCCAGTAGGCGTGGCTGTCCGGGTTACCTTTCTTGCTGGTGCAGCTaGCTGCACAGGGGAAGACATCCTCACAGCCCTCGCCATGCAGCC +
Preference number: 5 (lower is better)
Translates to: SSRRGCPGYLSCWCS*LHRGRHPHSPRHAA
Trigger: GGCTGCATGGCGAGGGCTGTGAGGATGTCTTCCCCTGTGCAGGCAGCTGCACCAGCAAGAAAGGTAACCCGGACAGCCACGCCTACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409851.8
ENST00000468638.1
ENST00000523221.1
CDS-3UTR CAA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCGTGGCAGACCTGTCCTaGGCTGCCCTTGACAGCCGC +
Preference number: 5 (lower is better)
Translates to: TDIFLPAGIGRQQALLACVADLS*AALDSR
Trigger: GCGGCTGTCAAGGGCAGCCAAGGACAGGTCTGCCAC...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGTCCGGGTTACCTTTCTaGCTGGTGCAGCTGCCTGCA +
Preference number: 5 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGSGLPF*LVQLPA
Trigger: TGCAGGCAGCTGCACCAGCAAGAAAGGTAACCCGGA...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409851.8
CDS GCA 90 bp ACGTTCAGCCACACTTTCTCCCACTCCTCCTCGTGCCAGTCCACCTaGAGGGAAGATCGGCTGTTTCTCCCTGTCCACCGGGCCATGAGG +
Preference number: 5 (lower is better)
Translates to: TFSHTFSHSSSCQST*REDRLFLPVHRAMR
Trigger: CCTCATGGCCCGGTGGACAGGGAGAAACAGCCGATCTTCCCTGCAGGTGGACTGGCACGAGGAGGAGTGGGAGAAAGTGTGGCTGAACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 90 bp GCCGTGTCTTGTCTGCCAAGATGGCGAGTGTCCTCTCAAGGCCAGTaGCAGACCTGTCCTTGGCTGCCCTTGACAGCCGCTCTGCGTAGT +
Preference number: 5 (lower is better)
Translates to: AVSCLPRWRVSSQGQ*QTCPWLPLTAALRS
Trigger: ACTACGCAGAGCGGCTGTCAAGGGCAGCCAAGGACAGGTCTGCCACTGGCCTTGAGAGGACACTCGCCATCTTGGCAGACAAGACACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 90 bp ATTCTTCCGGGCATGCACGTTCTGACCCAGAAACCGCAGCAGCTCTaGCAGGCACGTCTGACTGCGAGACCGAGGCAGGCAATCCTCAGG +
Preference number: 5 (lower is better)
Translates to: ILPGMHVLTQKPQQL*QARLTARPRQAILR
Trigger: CCTGAGGATTGCCTGCCTCGGTCTCGCAGTCAGACGTGCCTGCCAGAGCTGCTGCGGTTTCTGGGTCAGAACGTGCATGCCCGGAAGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 90 bp CGCTGGGTAGCATTGGGCTCTGATGGAGAGGCGTCTCAGGCCTCCTaGGTAAGCACAGTGATGCCACGTATCGCTGACCCCAGACTCAGC +
Preference number: 5 (lower is better)
Translates to: RWVALGSDGEASQAS*VSTVMPRIADPRLS
Trigger: GCTGAGTCTGGGGTCAGCGATACGTGGCATCACTGTGCTTACCCAGGAGGCCTGAGACGCCTCTCCATCAGAGCCCAATGCTACCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CCA 90 bp AGCAAGGTCGAGTGGCAGGCTCAAGGCCATGTGGTTAGCCTGGCATaGTCAGGGCTGGAATCCAGGTCATCTGACTCCCCAGGAGGTGCC +
Preference number: 5 (lower is better)
Translates to: SKVEWQAQGHVVSLA*SGLESRSSDSPGGA
Trigger: GGCACCTCCTGGGGAGTCAGATGACCTGGATTCCAGCCCTGACCATGCCAGGCTAACCACATGGCCTTGAGCCTGCCACTCGACCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CCA 90 bp ATTCTTCCGGGCATGCACGTTCTGACCCAGAAACCGCAGCAGCTCTaGCAGGCACGTCTGACTGCGAGACCGAGGCAGGCCTGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: ILPGMHVLTQKPQQL*QARLTARPRQAWFP
Trigger: TGGAAACCAGGCCTGCCTCGGTCTCGCAGTCAGACGTGCCTGCCAGAGCTGCTGCGGTTTCTGGGTCAGAACGTGCATGCCCGGAAGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498026.1
CDS-3UTR CAA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCGAGTTGGCCAGGAGCTaGCAGTCGCAGACCGTGACC +
Preference number: 5 (lower is better)
Translates to: TDIFLPAGIGRQQALLACELARS*QSQTVT
Trigger: GGTCACGGTCTGCGACTGCAAGCTCCTGGCCAACTC...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS TCA 90 bp GCCTTAAGTCTCGGATGGGCACCAGGCCGCTCAAGTTCTTCTGGGTaGCTACCTCCCGTGTTCCAATGCTGCGCATGCACTCCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: ALSLGWAPGRSSSSG*LPPVFQCCACTPGP
Trigger: AGGCCCTGGAGTGCATGCGCAGCATTGGAACACGGGAGGTAGTCACCCAGAAGAACTTGAGCGGCCTGGTGCCCATCCGAGACTTAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409540.7
CDS TCA 90 bp GCCCTGGCGTACACAGGTCCTGTGCTAATTACTTCACGTTGCTGCTaGGTGCTCCACACCACGCCGGTCAGGGGACAGGGCAGAGACAGA +
Preference number: 5 (lower is better)
Translates to: ALAYTGPVLITSRCC*VLHTTPVRGQGRDR
Trigger: TCTGTCTCTGCCCTGTCCCCTGACCGGCGTGGTGTGGAGCACTCAGCAGCAACGTGAAGTAATTAGCACAGGACCTGTGTACGCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498026.1
CDS GCA 90 bp ACGAACTGCCGGGGCACGTGCAGGGAGAGCACGCTCTCTGCCATCTaGTCCAGGATCCGCAAATGGTTACCATCAGTGGTTGGAAACCGG +
Preference number: 5 (lower is better)
Translates to: TNCRGTCRESTLSAI*SRIRKWLPSVVGNR
Trigger: CCGGTTTCCAACCACTGATGGTAACCATTTGCGGATCCTGGAGCAGATGGCAGAGAGCGTGCTCTCCCTGCACGTGCCCCGGCAGTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS GCA 90 bp GAGCTTCACGAACTGCCGGGGCACGTGCAGGGAGAGCACGCTCTCTaGCATCTGCTCCAGGATCCGCAAATGGTTACCATCAGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: ELHELPGHVQGEHAL*HLLQDPQMVTISGW
Trigger: CCAACCACTGATGGTAACCATTTGCGGATCCTGGAGCAGATGGCAGAGAGCGTGCTCTCCCTGCACGTGCCCCGGCAGTTCGTGAAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS GCA 90 bp GCTGCATCTTCCTCTAGTAGGAGCTTCACGAACTGCCGGGGCACGTaGAGGGAGAGCACGCTCTCTGCCATCTGCTCCAGGATCCGCAAA +
Preference number: 5 (lower is better)
Translates to: AASSSSRSFTNCRGT*RESTLSAICSRIRK
Trigger: TTTGCGGATCCTGGAGCAGATGGCAGAGAGCGTGCTCTCCCTGCACGTGCCCCGGCAGTTCGTGAAGCTCCTACTAGAGGAAGATGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS GCA 90 bp CTCAGTCGAAGTGGGAGAGGCCTTGGAGGCAATGTAGTCAGGCCGTaGAGCGTTCAGCCCATGGATGGAGTTGGCCAGGAGCTTGCAGTC +
Preference number: 5 (lower is better)
Translates to: LSRSGRGLGGNVVRP*SVQPMDGVGQELAV
Trigger: GACTGCAAGCTCCTGGCCAACTCCATCCATGGGCTGAACGCTGCACGGCCTGACTACATTGCCTCCAAGGCCTCTCCCACTTCGACTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS GCA 90 bp AAGACCTGCGGGGCCATGCCATGCTCGTGTTGCAGGATCAGGCACTaGTCCAGTGTCACCGACATGGCTGTACGGTCCTTAGCGCTCTTG +
Preference number: 5 (lower is better)
Translates to: KTCGAMPCSCCRIRH*SSVTDMAVRSLALL
Trigger: CAAGAGCGCTAAGGACCGTACAGCCATGTCGGTGACACTGGAGCAGTGCCTGATCCTGCAACACGAGCATGGCATGGCCCCGCAGGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000498026.1
ENST00000523221.1
CDS CCA 90 bp ACGTCGATGGTGGAAGCCCGCTGCATTGCACGGGCCCTGGCACCATaGCGAGGGCTGTGCTCTCTTGCTGTCATGATGTCATTGGTGATG +
Preference number: 5 (lower is better)
Translates to: TSMVEARCIARALAP*RGLCSLAVMMSLVM
Trigger: CATCACCAATGACATCATGACAGCAAGAGAGCACAGCCCTCGCCATGGTGCCAGGGCCCGTGCAATGCAGCGGGCTTCCACCATCGACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000463367.1
CDS CCA 90 bp GTTCCAGCAAGGTCGAGTGGCAGGCTCAAGGCCATGTGGTTAGCCTaGCATGGTCAGGGCTGGAATCCAGGTCATCTGACTCCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: VPARSSGRLKAMWLA*HGQGWNPGHLTPQE
Trigger: CTCCTGGGGAGTCAGATGACCTGGATTCCAGCCCTGACCATGCCAGGCTAACCACATGGCCTTGAGCCTGCCACTCGACCTTGCTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CCA 90 bp CTCGTAGACAGTGCTGTGCAGCTCTCGGTTCCTCCCTTAGTTCTGTaGCTGCAGAGCCCTAGCTGCAGCATCTTCACTGGCCGAGGGTGG +
Preference number: 5 (lower is better)
Translates to: LVDSAVQLSVPPLVL*LQSPSCSIFTGRGW
Trigger: CCACCCTCGGCCAGTGAAGATGCTGCAGCTAGGGCTCTGCAGCCACAGAACTAAGGGAGGAACCGAGAGCTGCACAGCACTGTCTACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467042.1
CDS-3UTR CAA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTGTCCTTGGCTGCCCTaGACAGCCGCTCTGCGTAGT +
Preference number: 5 (lower is better)
Translates to: TDIFLPAGIGRQQALLACCPWLP*TAALRS
Trigger: ACTACGCAGAGCGGCTGTCAAGGGCAGCCAAGGACA...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS TCA 90 bp AAGGAATGGGAAAAGGGGAGAGGAGCGCTGGGTAGCATTGGGCTCTaGTGGAGAGGCGTCTCAGGCCTCCTGGGTAAGCACAGTGATGCC +
Preference number: 5 (lower is better)
Translates to: KEWEKGRGALGSIGL*WRGVSGLLGKHSDA
Trigger: GGCATCACTGTGCTTACCCAGGAGGCCTGAGACGCCTCTCCATCAGAGCCCAATGCTACCCAGCGCTCCTCTCCCCTTTTCCCATTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CCA 90 bp AGGTCGGTCAGGTTCTCCTGGTATGTGAGGATGATGGTCTGGTACTaGGTGACAATTTGGCGCCGGAGGCTCTCCCAGCAAGGGGACAGC +
Preference number: 5 (lower is better)
Translates to: RSVRFSWYVRMMVWY*VTIWRRRLSQQGDS
Trigger: GCTGTCCCCTTGCTGGGAGAGCCTCCGGCGCCAAATTGTCACCCAGTACCAGACCATCATCCTCACATACCAGGAGAACCTGACCGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS-3UTR CAA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCTGTCCACGGTGCTGGTaGGTACCCACAGTTAGCGTC +
Preference number: 5 (lower is better)
Translates to: LHRHFPPCRHRETAGAACCPRCW*VPTVSV
Trigger: GACGCTAACTGTGGGTACCAACCAGCACCGTGGACA...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS TCA 90 bp CCCATTGACAGTGTCCACAGACCGGGTCACAGGGGGCCGTTGGTCTaGCTTCTCCTCCATCTGCCAGCCAATCACGGTGATGTTACCTAC +
Preference number: 5 (lower is better)
Translates to: PIDSVHRPGHRGPLV*LLLHLPANHGDVTY
Trigger: GTAGGTAACATCACCGTGATTGGCTGGCAGATGGAGGAGAAGTCAGACCAACGGCCCCCTGTGACCCGGTCTGTGGACACTGTCAATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS TCA 90 bp CGCCATGCAGCCGCTCCTTCTGCAGCAGCTTGTCCACACGCTGAATaGTGCACTCTAGGCTCTTGTCCACGTTCAGCCACACTTTCTCCC +
Preference number: 5 (lower is better)
Translates to: RHAAAPSAAACPHAE*CTLGSCPRSATLSP
Trigger: GGGAGAAAGTGTGGCTGAACGTGGACAAGAGCCTAGAGTGCATCATTCAGCGTGTGGACAAGCTGCTGCAGAAGGAGCGGCTGCATGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000468638.1
ENST00000523221.1
CDS TCA 90 bp ACTGCAGGCTCAGGTAGGTGGCTATGGTGGGCGCGCTGTCCTGCATaGGCAGGAATACCATGGCCTTCTTGGCCTTGTCACTCATCATGG +
Preference number: 5 (lower is better)
Translates to: TAGSGRWLWWARCPA*AGIPWPSWPCHSSW
Trigger: CCATGATGAGTGACAAGGCCAAGAAGGCCATGGTATTCCTGCTCATGCAGGACAGCGCGCCCACCATAGCCACCTACCTGAGCCTGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS TCA 90 bp CCTGTGATGACGGGCAGCATGTCTGCGGAGGCGCTGGAAGTGGCCTaGGTGACTTTGAAGGTCACGTTCCTCAAGTCCATGATCCCAAGG +
Preference number: 5 (lower is better)
Translates to: PVMTGSMSAEALEVA*VTLKVTFLKSMIPR
Trigger: CCTTGGGATCATGGACTTGAGGAACGTGACCTTCAAAGTCACTCAGGCCACTTCCAGCGCCTCCGCAGACATGCTGCCCGTCATCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS TCA 90 bp AGGCAGCATATGGGAAGCATGGATGCATACGCACGTGTGGTCAGATaGGGATGGCATGCAGTGGAGGGCATGGTGGAGGGGCATGGTGAG +
Preference number: 5 (lower is better)
Translates to: RQHMGSMDAYARVVR*GWHAVEGMVEGHGE
Trigger: CTCACCATGCCCCTCCACCATGCCCTCCACTGCATGCCATCCTCATCTGACCACACGTGCGTATGCATCCATGCTTCCCATATGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468638.1
CDS GCA 90 bp GAAGCCCGCTGCATTGCACGGGCCCTGGCACCATGGCGAGGGCTGTaGTCTCTTGCTGTCATGATGTCATTGGTGATGATGTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: EARCIARALAPWRGL*SLAVMMSLVMMCFL
Trigger: CAAGAAGCACATCATCACCAATGACATCATGACAGCAAGAGAGCACAGCCCTCGCCATGGTGCCAGGGCCCGTGCAATGCAGCGGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000463367.1
CDS GCA 90 bp ACAGACCGGGTCACAGGGGGCCGTTGGTCTGACTTCTCCTCCATCTaGCAGCCAATCACGGTGATGTTACCTACACGGTCACTCTCTGCA +
Preference number: 5 (lower is better)
Translates to: TDRVTGGRWSDFSSI*QPITVMLPTRSLSA
Trigger: TGCAGAGAGTGACCGTGTAGGTAACATCACCGTGATTGGCTGGCAGATGGAGGAGAAGTCAGACCAACGGCCCCCTGTGACCCGGTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 90 bp CGCTCTCTGCCATCTGCTCCAGGATCCGCAAATGGTTACCATCAGTaGTTGGAAACCGGTACATGCGGCAGATGGCACCACCGAACACCG +
Preference number: 5 (lower is better)
Translates to: RSLPSAPGSANGYHQ*LETGTCGRWHHRTP
Trigger: CGGTGTTCGGTGGTGCCATCTGCCGCATGTACCGGTTTCCAACCACTGATGGTAACCATTTGCGGATCCTGGAGCAGATGGCAGAGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 90 bp TCTAGCCTTAAGTCTCGGATGGGCACCAGGCCGCTCAAGTTCTTCTaGGTGACTACCTCCCGTGTTCCAATGCTGCGCATGCACTCCAGG +
Preference number: 5 (lower is better)
Translates to: SSLKSRMGTRPLKFF*VTTSRVPMLRMHSR
Trigger: CCTGGAGTGCATGCGCAGCATTGGAACACGGGAGGTAGTCACCCAGAAGAACTTGAGCGGCCTGGTGCCCATCCGAGACTTAAGGCTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409540.7
CDS-3UTR CAA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCAGAACCATCCTCCCATaGACAGTGTCCACAGACCGG +
Preference number: 5 (lower is better)
Translates to: TDIFLPAGIGRQQALLACRTILP*TVSTDR
Trigger: CCGGTCTGTGGACACTGTCAATGGGAGGATGGTTCT...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCAGAACCATCCTCCCATaGACAGTGTCCACAGACCGG +
Preference number: 5 (lower is better)
Translates to: LHRHFPPCRHRETAGAACRTILP*TVSTDR
Trigger: CCGGTCTGTGGACACTGTCAATGGGAGGATGGTTCT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATAGCCCATGGATGGAGTaGGCCAGGAGCTTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNSPWME*ARSLQS
Trigger: CGACTGCAAGCTCCTGGCCAACTCCATCCATGGGCT...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGGCCTTCTTGGCCTaGTCACTCATCATGGCCACG +
Preference number: 5 (lower is better)
Translates to: LHRHFPPCRHRETAGAACMAFLA*SLIMAT
Trigger: CGTGGCCATGATGAGTGACAAGGCCAAGAAGGCCAT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCATGGCCTTCTTGGCCTaGTCACTCATCATGGCCACG +
Preference number: 5 (lower is better)
Translates to: TDIFLPAGIGRQQALLACMAFLA*SLIMAT
Trigger: CGTGGCCATGATGAGTGACAAGGCCAAGAAGGCCAT...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGATCATGTCCTCCAGCATaGCCAGCTCCTCCCCGTAGG +
Preference number: 5 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARSCPPA*PAPPRR
Trigger: CCTACGGGGAGGAGCTGGCAATGCTGGAGGACATGA...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGACAGCCAGGGCCACTATaGGGAGCAGACAGCCTGCTA +
Preference number: 5 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARQPGPL*GADSLL
Trigger: TAGCAGGCTGTCTGCTCCCAATAGTGGCCCTGGCTG...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS TCA 90 bp GAGTGTCCTCTCAAGGCCAGTGGCAGACCTGTCCTTGGCTGCCCTTaGCAGCCGCTCTGCGTAGTAACTCACTTGGGTTTTCAGGGTGTT +
Preference number: 5 (lower is better)
Translates to: ECPLKASGRPVLGCP*QPLCVVTHLGFQGV
Trigger: AACACCCTGAAAACCCAAGTGAGTTACTACGCAGAGCGGCTGTCAAGGGCAGCCAAGGACAGGTCTGCCACTGGCCTTGAGAGGACACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS GCA 90 bp CACGTTAAACCCGTCGCGATTTCCTGTGATGACGGGCAGCATGTCTaGGGAGGCGCTGGAAGTGGCCTGAGTGACTTTGAAGGTCACGTT +
Preference number: 5 (lower is better)
Translates to: HVKPVAISCDDGQHV*GGAGSGLSDFEGHV
Trigger: AACGTGACCTTCAAAGTCACTCAGGCCACTTCCAGCGCCTCCGCAGACATGCTGCCCGTCATCACAGGAAATCGCGACGGGTTTAACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS GCA 90 bp TGGAGGGTGCTGTGCTATGGAAAGGGAGGGCTCTGGGTAAAACACTaGCACAGGCTGAGTCACACGCTTCACATGGCTCAGAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: WRVLCYGKGGLWVKH*HRLSHTLHMAQSSR
Trigger: TCTGGAGCTCTGAGCCATGTGAAGCGTGTGACTCAGCCTGTGGCAGTGTTTTACCCAGAGCCCTCCCTTTCCATAGCACAGCACCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CCA 90 bp ATCCTCCCATTGACAGTGTCCACAGACCGGGTCACAGGGGGCCGTTaGTCTGACTTCTCCTCCATCTGCCAGCCAATCACGGTGATGTTA +
Preference number: 5 (lower is better)
Translates to: ILPLTVSTDRVTGGR*SDFSSICQPITVML
Trigger: TAACATCACCGTGATTGGCTGGCAGATGGAGGAGAAGTCAGACCAACGGCCCCCTGTGACCCGGTCTGTGGACACTGTCAATGGGAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 90 bp TGCAGGGAGAGCACGCTCTCTGCCATCTGCTCCAGGATCCGCAAATaGTTACCATCAGTGGTTGGAAACCGGTACATGCGGCAGATGGCA +
Preference number: 5 (lower is better)
Translates to: CRESTLSAICSRIRK*LPSVVGNRYMRQMA
Trigger: TGCCATCTGCCGCATGTACCGGTTTCCAACCACTGATGGTAACCATTTGCGGATCCTGGAGCAGATGGCAGAGAGCGTGCTCTCCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 90 bp GAAGATCGGCTGTTTCTCCCTGTCCACCGGGCCATGAGGGTGTCCTaGTCATTTCTAAGCATCACCTGCTCCTCCTCAGTCGAAGTGGGA +
Preference number: 5 (lower is better)
Translates to: EDRLFLPVHRAMRVS*SFLSITCSSSVEVG
Trigger: TCCCACTTCGACTGAGGAGGAGCAGGTGATGCTTAGAAATGACCAGGACACCCTCATGGCCCGGTGGACAGGGAGAAACAGCCGATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 90 bp AGTGGCAGGCTCAAGGCCATGTGGTTAGCCTGGCATGGTCAGGGCTaGAATCCAGGTCATCTGACTCCCCAGGAGGTGCCTCTTTTATGT +
Preference number: 5 (lower is better)
Translates to: SGRLKAMWLAWHGQG*NPGHLTPQEVPLLC
Trigger: ACATAAAAGAGGCACCTCCTGGGGAGTCAGATGACCTGGATTCCAGCCCTGACCATGCCAGGCTAACCACATGGCCTTGAGCCTGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CCA 90 bp AGCACATGGGCTTCAGAGCCAGGCACCCCTTTCTTCATCTGGACATaGATCCTATCACCGACCCATAGGGCTGTTGTGGATTCAGCGTGG +
Preference number: 5 (lower is better)
Translates to: STWASEPGTPFFIWT*ILSPTHRAVVDSAW
Trigger: CCACGCTGAATCCACAACAGCCCTATGGGTCGGTGATAGGATCCATGTCCAGATGAAGAAAGGGGTGCCTGGCTCTGAAGCCCATGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467042.1
CDS-3UTR CAA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAGTAGCCTGGACATGTTaGCTCTCGGACCATGTGGCA +
Preference number: 5 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARVAWTC*LSDHVA
Trigger: TGCCACATGGTCCGAGAGCAAACATGTCCAGGCTAC...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCGGGCTCATCTGGGTCTaGTATATTTCCTGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: TDIFLPAGIGRQQALLACGLIWV*YISCQR
Trigger: TCTCTGGCAGGAAATATACAAGACCCAGATGAGCCC...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCCGCAATGAAGCGTATTaGGATCGGATTCCTAACGCC +
Preference number: 5 (lower is better)
Translates to: LHRHFPPCRHRETAGAACRNEAY*DRIPNA
Trigger: GGCGTTAGGAATCCGATCCAAATACGCTTCATTGCG...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGTTGAACTCTCATCCTTaGTATGTGCAAGTTTGTGGG +
Preference number: 5 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGLNSHP*YVQVCG
Trigger: CCCACAAACTTGCACATACAAAGGATGAGAGTTCAA...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGATGGGCGATGATCTCCTaGGCTCTGACAACATCCTGG +
Preference number: 5 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGWAMIS*ALTTSW
Trigger: CCAGGATGTTGTCAGAGCCAAGGAGATCATCGCCCA...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AGACGTAGGACCACCAGGAGAGAGTCAGGCCACAGACACCGAGGGAGGGCTGGGAAGTGGAACTGCATTTaGACAAGTCATACAACGAGG +
Preference number: 5 (lower is better)
Translates to: RRRTTRRESGHRHRGRAGKWNCI*TSHTTR
Trigger: CCTCGTTGTATGACTTGTCAAAATGCAGTTCCACTT...CCCAGCCCTCCCTCGGTGTCTGTGGCCTGACTCTCTCCTGGTGGTCCTACGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS GCA 90 bp GAAGCAGCACAAGGTGAAATGGAGGCAGCATATGGGAAGCATGGATaGATACGCACGTGTGGTCAGATGAGGATGGCATGCAGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: EAAQGEMEAAYGKHG*IRTCGQMRMACSGG
Trigger: CCCTCCACTGCATGCCATCCTCATCTGACCACACGTGCGTATGCATCCATGCTTCCCATATGCTGCCTCCATTTCACCTTGTGCTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468638.1
CDS CCA 90 bp CTCTGCCATCTGCTCCAGGATCCGCAAATGGTTACCATCAGTGGTTaGAAACCGGTACATGCGGCAGATGGCACCACCGAACACCGATTT +
Preference number: 5 (lower is better)
Translates to: LCHLLQDPQMVTISG*KPVHAADGTTEHRF
Trigger: AAATCGGTGTTCGGTGGTGCCATCTGCCGCATGTACCGGTTTCCAACCACTGATGGTAACCATTTGCGGATCCTGGAGCAGATGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 90 bp GTAAATTGGGGCTCAGAGCTAATAAAGGGATGGAACAGAGGAGGCTaGGGTCTAGCCTTAAGTCTCGGATGGGCACCAGGCCGCTCAAGT +
Preference number: 5 (lower is better)
Translates to: VNWGSELIKGWNRGG*GLALSLGWAPGRSS
Trigger: ACTTGAGCGGCCTGGTGCCCATCCGAGACTTAAGGCTAGACCCCAGCCTCCTCTGTTCCATCCCTTTATTAGCTCTGAGCCCCAATTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409540.7
CDS-3UTR CAA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACGTACTGGGTGACAATTaGGCGCCGGAGGCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNVLGDN*APEALP
Trigger: TGGGAGAGCCTCCGGCGCCAAATTGTCACCCAGTAC...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGATGGGTTTTCAGGGTGTaGATCTGGGCGATGATCTCC +
Preference number: 5 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARWVFRV*IWAMIS
Trigger: GGAGATCATCGCCCAGATCAACACCCTGAAAACCCA...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAACCAGCTGCCGTGTCTaGTCTGCCAAGATGGCGAGT +
Preference number: 5 (lower is better)
Translates to: QPAKHKFPSVQPSALSARTSCRV*SAKMAS
Trigger: ACTCGCCATCTTGGCAGACAAGACACGGCAGCTGGT...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCAATACCATGGCCTTCTaGGCCTTGTCACTCATCATG +
Preference number: 5 (lower is better)
Translates to: LHRHFPPCRHRETAGAACNTMAF*ALSLIM
Trigger: CATGATGAGTGACAAGGCCAAGAAGGCCATGGTATT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAAGTGTCTGCTGCTCATaGATGCCCACGTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARSVCCS*MPTLKR
Trigger: CCTCTTCAACGTGGGCATCAATGAGCAGCAGACACT...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAGCAGATCTCAGCAGCTaGCCAGAGAATGTCGACGTT +
Preference number: 5 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARADLSS*PENVDV
Trigger: AACGTCGACATTCTCTGGCAAGCTGCTGAGATCTGC...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAACAGTGAACTCAGCTTaGAGGGAGCAGCAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARTVNSA*REQQRA
Trigger: AGCTCTCTGCTGCTCCCTCAAAGCTGAGTTCACTGT...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS CCA 90 bp AAAGCATGTAATCTGGGCCTAAGCGAAGTGGAGGGTGCTGTGCTATaGAAAGGGAGGGCTCTGGGTAAAACACTGCCACAGGCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: KACNLGLSEVEGAVL*KGRALGKTLPQAES
Trigger: TGACTCAGCCTGTGGCAGTGTTTTACCCAGAGCCCTCCCTTTCCATAGCACAGCACCCTCCACTTCGCTTAGGCCCAGATTACATGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CCA 90 bp AGTCTGCATGGGGGAGGAGGGCATGGAGTCAGAGACACAGACAAATaGAAGCAGCACAAGGTGAAATGGAGGCAGCATATGGGAAGCATG +
Preference number: 5 (lower is better)
Translates to: SLHGGGGHGVRDTDK*KQHKVKWRQHMGSM
Trigger: CATGCTTCCCATATGCTGCCTCCATTTCACCTTGTGCTGCTTCCATTTGTCTGTGTCTCTGACTCCATGCCCTCCTCCCCCATGCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468638.1
CDS CCA 90 bp TCTTCATCTGGACATGGATCCTATCACCGACCCATAGGGCTGTTGTaGATTCAGCGTGGAAACGTATGTAGAGCCCAGCCCAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: SSSGHGSYHRPIGLL*IQRGNVCRAQPSVW
Trigger: CCAGACACTGGGCTGGGCTCTACATACGTTTCCACGCTGAATCCACAACAGCCCTATGGGTCGGTGATAGGATCCATGTCCAGATGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467042.1
CDS-3UTR CAA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAGGTTACCATCAGTGGTaGGAAACCGGTACATGCGGC +
Preference number: 5 (lower is better)
Translates to: QPAKHKFPSVQPSALSARGYHQW*ETGTCG
Trigger: GCCGCATGTACCGGTTTCCAACCACTGATGGTAACC...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CCCCTAGATCTGGGCAGCCAGATTGTGCCAAGTCATCTACTAAGCAGAGACTCATGGGCGATGATCTCCTaGGCTCTGACAACATCCTGG +
Preference number: 5 (lower is better)
Translates to: PLDLGSQIVPSHLLSRDSWAMIS*ALTTSW
Trigger: CCAGGATGTTGTCAGAGCCAAGGAGATCATCGCCCA...TGAGTCTCTGCTTAGTAGATGACTTGGCACAATCTGGCTGCCCAGATCTAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTTAACCTCAACGCTGTaGCCCCTCTGCTTCAAATTA +
Preference number: 5 (lower is better)
Translates to: TDIFLPAGIGRQQALLACLTSTL*PLCFKL
Trigger: TAATTTGAAGCAGAGGGGCAACAGCGTTGAGGTTAA...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCATGAGGAAGGTACTGTaGTTGTCCACACTTTGCACA +
Preference number: 5 (lower is better)
Translates to: TDIFLPAGIGRQQALLACMRKVL*LSTLCT
Trigger: TGTGCAAAGTGTGGACAACAACAGTACCTTCCTCAT...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGACAGAGGCCGCGCTGCTaGGTGTTCACAGGAATGAAA +
Preference number: 5 (lower is better)
Translates to: QPAKHKFPSVQPSALSARQRPRC*VFTGMK
Trigger: TTTCATTCCTGTGAACACCAAGCAGCGCGGCCTCTG...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCAAGGGCCAACTTCATTaGTGGGGAGAAATCACCATA +
Preference number: 5 (lower is better)
Translates to: LHRHFPPCRHRETAGAACKGQLH*WGEITI
Trigger: TATGGTGATTTCTCCCCACAAATGAAGTTGGCCCTT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS TCA 90 bp GGGGCCGTTGGTCTGACTTCTCCTCCATCTGCCAGCCAATCACGGTaGTGTTACCTACACGGTCACTCTCTGCAGACCTTAGTGTTAAAT +
Preference number: 5 (lower is better)
Translates to: GAVGLTSPPSASQSR*CYLHGHSLQTLVLN
Trigger: ATTTAACACTAAGGTCTGCAGAGAGTGACCGTGTAGGTAACATCACCGTGATTGGCTGGCAGATGGAGGAGAAGTCAGACCAACGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS GCA 90 bp GTTGGTTCCCTCAATGATCTCCGTCTGTGCATGCTTCGTCCAGAATaGCTGAGGAGGGGTGGTGACACTCACCGCAACAAAACTATTTGG +
Preference number: 5 (lower is better)
Translates to: VGSLNDLRLCMLRPE*LRRGGDTHRNKTIW
Trigger: CCAAATAGTTTTGTTGCGGTGAGTGTCACCACCCCTCCTCAGGCATTCTGGACGAAGCATGCACAGACGGAGATCATTGAGGGAACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 90 bp CATCTGACTCCCCAGGAGGTGCCTCTTTTATGTCACACCACCTCTTaGACATTGGTGCCAGGCCACCAACTAATGTTGACCAAGGAATGG +
Preference number: 5 (lower is better)
Translates to: HLTPQEVPLLCHTTS*TLVPGHQLMLTKEW
Trigger: CCATTCCTTGGTCAACATTAGTTGGTGGCCTGGCACCAATGTCCAAGAGGTGGTGTGACATAAAAGAGGCACCTCCTGGGGAGTCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CCA 90 bp AATCCAAGCACATGGGCTTCAGAGCCAGGCACCCCTTTCTTCATCTaGACATGGATCCTATCACCGACCCATAGGGCTGTTGTGGATTCA +
Preference number: 5 (lower is better)
Translates to: NPSTWASEPGTPFFI*TWILSPTHRAVVDS
Trigger: TGAATCCACAACAGCCCTATGGGTCGGTGATAGGATCCATGTCCAGATGAAGAAAGGGGTGCCTGGCTCTGAAGCCCATGTGCTTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467042.1
CDS-3UTR CAA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGTGGCAGACCTGTCCTaGGCTGCCCTTGACAGCCGC +
Preference number: 5 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNVADLS*AALDSR
Trigger: GCGGCTGTCAAGGGCAGCCAAGGACAGGTCTGCCAC...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGAAATACCATGGCCTTCTaGGCCTTGTCACTCATCATG +
Preference number: 5 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARNTMAF*ALSLIM
Trigger: CATGATGAGTGACAAGGCCAAGAAGGCCATGGTATT...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAAGTGTCTGCTGCTCATaGATGCCCACGTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: QPAKHKFPSVQPSALSARSVCCS*MPTLKR
Trigger: CCTCTTCAACGTGGGCATCAATGAGCAGCAGACACT...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCTTCTCCTTTGACCTTTaGAATTTGGCTCGTGATGCA +
Preference number: 5 (lower is better)
Translates to: LHRHFPPCRHRETAGAACFSFDL*NLARDA
Trigger: TGCATCACGAGCCAAATTCAAAAGGTCAAAGGAGAA...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTTCTCCTTTGACCTTTaGAATTTGGCTCGTGATGCA +
Preference number: 5 (lower is better)
Translates to: TDIFLPAGIGRQQALLACFSFDL*NLARDA
Trigger: TGCATCACGAGCCAAATTCAAAAGGTCAAAGGAGAA...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCCAGATCAAGATAACATaGCCTGAACCCCCTGTAATT +
Preference number: 5 (lower is better)
Translates to: TDIFLPAGIGRQQALLACQIKIT*PEPPVI
Trigger: AATTACAGGGGGTTCAGGCAATGTTATCTTGATCTG...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS TCA 90 bp GTTCCCTCAATGATCTCCGTCTGTGCATGCTTCGTCCAGAATGCCTaGGGAGGGGTGGTGACACTCACCGCAACAAAACTATTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: VPSMISVCACFVQNA*GGVVTLTATKLFGF
Trigger: AAAGCCAAATAGTTTTGTTGCGGTGAGTGTCACCACCCCTCCTCAGGCATTCTGGACGAAGCATGCACAGACGGAGATCATTGAGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS TCA 90 bp GGCGTCTCAGGCCTCCTGGGTAAGCACAGTGATGCCACGTATCGCTaGCCCCAGACTCAGCACATTCTGATCCACTTTTTAGTATATTCT +
Preference number: 5 (lower is better)
Translates to: GVSGLLGKHSDATYR*PQTQHILIHFLVYS
Trigger: AGAATATACTAAAAAGTGGATCAGAATGTGCTGAGTCTGGGGTCAGCGATACGTGGCATCACTGTGCTTACCCAGGAGGCCTGAGACGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS TCA 90 bp ACCAGGAGGTGCACAATGCATGCCACCAAACACATCTTGTGTCAGTaGCTACGACAGCATGGGAAGGAGCCATGTCACATAGGAATCCTC +
Preference number: 5 (lower is better)
Translates to: TRRCTMHATKHILCQ*LRQHGKEPCHIGIL
Trigger: GAGGATTCCTATGTGACATGGCTCCTTCCCATGCTGTCGTAGTCACTGACACAAGATGTGTTTGGTGGCATGCATTGTGCACCTCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467042.1
CDS-3UTR CAA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCAGAAATATAGGATTGTaGGTTCCCTCAATGATCTCC +
Preference number: 5 (lower is better)
Translates to: TDIFLPAGIGRQQALLACRNIGL*VPSMIS
Trigger: GGAGATCATTGAGGGAACCAACAATCCTATATTTCT...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CTTCACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCAGCCCAGTAAATACATaGTTCCCTGAGATCTATCTT +
Preference number: 5 (lower is better)
Translates to: LHRHFPPCRHRETAGAACSPVNT*FPEIYL
Trigger: AAGATAGATCTCAGGGAACAATGTATTTACTGGGCT...GCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCAGCCCAGTAAATACATaGTTCCCTGAGATCTATCTT +
Preference number: 5 (lower is better)
Translates to: TDIFLPAGIGRQQALLACSPVNT*FPEIYL
Trigger: AAGATAGATCTCAGGGAACAATGTATTTACTGGGCT...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGATGCGTAGTAACTCACTaGGGTTTTCAGGGTGTTGAT +
Preference number: 5 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARCVVTH*GFQGVD
Trigger: ATCAACACCCTGAAAACCCAAGTGAGTTACTACGCA...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGAGTTGGCCAGGAGCTaGCAGTCGCAGACCGTGACC +
Preference number: 5 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNELARS*QSQTVT
Trigger: GGTCACGGTCTGCGACTGCAAGCTCCTGGCCAACTC...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACGCAGATCTCAGCAGCTaGCCAGAGAATGTCGACGTT +
Preference number: 5 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNADLSS*PENVDV
Trigger: AACGTCGACATTCTCTGGCAAGCTGCTGAGATCTGC...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCTTACTATCCACACTATaGAGCCAAACATTACCTCCT +
Preference number: 5 (lower is better)
Translates to: TDIFLPAGIGRQQALLACLLSTL*SQTLPP
Trigger: AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAA...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAACTATGTGGGGTACCTaGCAGGTGTTACCTTCTAAT +
Preference number: 5 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGTMWGT*QVLPSN
Trigger: ATTAGAAGGTAACACCTGCAAGGTACCCCACATAGT...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGATTAACCTCAACGCTGTaGCCCCTCTGCTTCAAATTA +
Preference number: 5 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGLTSTL*PLCFKL
Trigger: TAATTTGAAGCAGAGGGGCAACAGCGTTGAGGTTAA...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGATTAACCTCAACGCTGTaGCCCCTCTGCTTCAAATTA +
Preference number: 5 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARLTSTL*PLCFKL
Trigger: TAATTTGAAGCAGAGGGGCAACAGCGTTGAGGTTAA...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATAAGGGCCAACTTCATTaGTGGGGAGAAATCACCATA +
Preference number: 5 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNKGQLH*WGEITI
Trigger: TATGGTGATTTCTCCCCACAAATGAAGTTGGCCCTT...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS TCA 90 bp CTAGCACTTTACACACAGCAGGTCCTCAGGGAATATTCACTGGGTTaGACTCAAGAGGGAATTCTCGTAGACAGTGCTGTGCAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: LALYTQQVLREYSLG*TQEGILVDSAVQLS
Trigger: CGAGAGCTGCACAGCACTGTCTACGAGAATTCCCTCTTGAGTTCAACCCAGTGAATATTCCCTGAGGACCTGCTGTGTGTAAAGTGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467042.1
CDS GCA 90 bp ATTCACCACAACCTCTGTGAGAAGGGTAAGAGCTGCAGAAGAGTCTaGTGTCCACGGGCTACATACAGGTGGCAAAACACTAGTGAGACA +
Preference number: 5 (lower is better)
Translates to: IHHNLCEKGKSCRRV*CPRATYRWQNTSET
Trigger: TGTCTCACTAGTGTTTTGCCACCTGTATGTAGCCCGTGGACAGCAGACTCTTCTGCAGCTCTTACCCTTCTCACAGAGGTTGTGGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS-3UTR CAA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCGTGATGATGTGCTTCTaGATCCTCGGTCAGACCACG +
Preference number: 5 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSVMMCF*ILGQTT
Trigger: CGTGGTCTGACCGAGGATCAAGAAGCACATCATCAC...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp ACAGACATTTTCCTCCCTGCAGGCATCGGGAGACAGCAGGCGCTGCTTGCATGCCTTAGAAATATAGGATaGTTGGTTCCCTCAATGATC +
Preference number: 5 (lower is better)
Translates to: TDIFLPAGIGRQQALLACLRNIG*LVPSMI
Trigger: GATCATTGAGGGAACCAACAATCCTATATTTCTAAG...GCATGCAAGCAGCGCCTGCTGTCTCCCGATGCCTGCAGGGAGGAAAATGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGACACGGAGAGTTTGACTaGTGTCATCTGATTGATAAG +
Preference number: 5 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGHGEFD*CHLIDK
Trigger: CTTATCAATCAGATGACACAAGTCAAACTCTCCGTG...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACCGCAATGAAGCGTATTaGGATCGGATTCCTAACGCC +
Preference number: 5 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNRNEAY*DRIPNA
Trigger: GGCGTTAGGAATCCGATCCAAATACGCTTCATTGCG...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGGTACTGGGTGACAATTaGGCGCCGGAGGCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMVLGDN*APEALP
Trigger: TGGGAGAGCCTCCGGCGCCAAATTGTCACCCAGTAC...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCTGGGTTTTCAGGGTGTaGATCTGGGCGATGATCTCC +
Preference number: 5 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSWVFRV*IWAMIS
Trigger: GGAGATCATCGCCCAGATCAACACCCTGAAAACCCA...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATTGTCCTTGGCTGCCCTaGACAGCCGCTCTGCGTAGT +
Preference number: 5 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNCPWLP*TAALRS
Trigger: ACTACGCAGAGCGGCTGTCAAGGGCAGCCAAGGACA...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCACCAGCTGCCGTGTCTaGTCTGCCAAGATGGCGAGT +
Preference number: 5 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTATSCRV*SAKMAS
Trigger: ACTCGCCATCTTGGCAGACAAGACACGGCAGCTGGT...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATAGCCCATGGATGGAGTaGGCCAGGAGCTTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNSPWME*ARSLQS
Trigger: CGACTGCAAGCTCCTGGCCAACTCCATCCATGGGCT...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCTCCGGGTTACCTTTCTaGCTGGTGCAGCTGCCTGCA +
Preference number: 5 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTASGLPF*LVQLPA
Trigger: TGCAGGCAGCTGCACCAGCAAGAAAGGTAACCCGGA...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000074304.9
ENST00000409851.8
CDS-3UTR CAA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATAAGTGGAACTGCATTTaGACAAGTCATACAACGAGG +
Preference number: 5 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNKWNCI*TSHTTR
Trigger: CCTCGTTGTATGACTTGTCAAAATGCAGTTCCACTT...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCCAAGGGAGATAACGGGTCGTGTGTGCCTAGAAGACGGCACAGTGGTGCAAGACTCAAAAGTCATCATTaGGCCACCAGACAAATCGTA +
Preference number: 5 (lower is better)
Translates to: SKGDNGSCVPRRRHSGARLKSHH*ATRQIV
Trigger: TACGATTTGTCTGGTGGCCAAATGATGACTTTTGAG...TCTTGCACCACTGTGCCGTCTTCTAGGCACACACGACCCGTTATCTCCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCCAAGCTACTCTCCGTTaGCCTACTGTTGGCACAGGA +
Preference number: 5 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSQATLR*PTVGTG
Trigger: TCCTGTGCCAACAGTAGGCAAACGGAGAGTAGCTTG...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS CCA 90 bp CGAACACCGATTTCAGCAAAGTGTCCTTTCGCAATGAAGCGTATTTaGATCGGATTCCTAACGCCTCCGTCAAGCTCTCATCGACAGGAA +
Preference number: 5 (lower is better)
Translates to: RTPISAKCPFAMKRI*IGFLTPPSSSHRQE
Trigger: TTCCTGTCGATGAGAGCTTGACGGAGGCGTTAGGAATCCGATCCAAATACGCTTCATTGCGAAAGGACACTTTGCTGAAATCGGTGTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 90 bp TCACCAGGTATGCTATGCTCAGAAAGAGCCACACAATCAGTAAATTaGGGCTCAGAGCTAATAAAGGGATGGAACAGAGGAGGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: SPGMLCSERATQSVN*GSELIKGWNRGGWG
Trigger: ACCCCAGCCTCCTCTGTTCCATCCCTTTATTAGCTCTGAGCCCCAATTTACTGATTGTGTGGCTCTTTCTGAGCATAGCATACCTGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409540.7
CDS-3UTR CAA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCGGGCTCATCTGGGTCTaGTATATTTCCTGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSGLIWV*YISCQR
Trigger: TCTCTGGCAGGAAATATACAAGACCCAGATGAGCCC...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGACCGCAACAAAACTATTaGGCTTTCGATCTAGCGATG +
Preference number: 5 (lower is better)
Translates to: QPAKHKFPSVQPSALSARPQQNY*AFDLAM
Trigger: CATCGCTAGATCGAAAGCCAAATAGTTTTGTTGCGG...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAGAGTTGGCCAGGAGCTaGCAGTCGCAGACCGTGACC +
Preference number: 5 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKELARS*QSQTVT
Trigger: GGTCACGGTCTGCGACTGCAAGCTCCTGGCCAACTC...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCATGGCCTTCTTGGCCTaGTCACTCATCATGGCCACG +
Preference number: 5 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAMAFLA*SLIMAT
Trigger: CGTGGCCATGATGAGTGACAAGGCCAAGAAGGCCAT...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACTCATGTCCTCCAGCATaGCCAGCTCCTCCCCGTAGG +
Preference number: 5 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNSCPPA*PAPPRR
Trigger: CCTACGGGGAGGAGCTGGCAATGCTGGAGGACATGA...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAGCAGATCTCAGCAGCTaGCCAGAGAATGTCGACGTT +
Preference number: 5 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLADLSS*PENVDV
Trigger: AACGTCGACATTCTCTGGCAAGCTGCTGAGATCTGC...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAACGGTCCTTAGCGCTCTaGCAGCTGGTGAACCGGACC +
Preference number: 5 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKRSLAL*QLVNRT
Trigger: GGTCCGGTTCACCAGCTGCAAGAGCGCTAAGGACCG...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CAA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTACAGCCAGGGCCACTATaGGGAGCAGACAGCCTGCTA +
Preference number: 5 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLQPGPL*GADSLL
Trigger: TAGCAGGCTGTCTGCTCCCAATAGTGGCCCTGGCTG...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGTAGCCTGGACATGTTaGCTCTCGGACCATGTGGCA +
Preference number: 5 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNVAWTC*LSDHVA
Trigger: TGCCACATGGTCCGAGAGCAAACATGTCCAGGCTAC...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGACTTAGAAATATAGGATaGTTGGTTCCCTCAATGATC +
Preference number: 5 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGLRNIG*LVPSMI
Trigger: GATCATTGAGGGAACCAACAATCCTATATTTCTAAG...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCAAGCAACTTGCTCAGAGTCACCAGCCAGTCAGGGGCAGAACCAGGATTGGGAATTGATAAGAGAGTCTaGAAAGAAGGCAATACTGCT +
Preference number: 5 (lower is better)
Translates to: SSNLLRVTSQSGAEPGLGIDKRV*KEGNTA
Trigger: AGCAGTATTGCCTTCTTTCAAGACTCTCTTATCAAT...TCCCAATCCTGGTTCTGCCCCTGACTGGCTGGTGACTCTGAGCAAGTTGCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGGTTACCATCAGTGGTaGGAAACCGGTACATGCGGC +
Preference number: 5 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNGYHQW*ETGTCG
Trigger: GCCGCATGTACCGGTTTCCAACCACTGATGGTAACC...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCTGGGTTTTCAGGGTGTaGATCTGGGCGATGATCTCC +
Preference number: 5 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAWVFRV*IWAMIS
Trigger: GGAGATCATCGCCCAGATCAACACCCTGAAAACCCA...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGTGGCAGACCTGTCCTaGGCTGCCCTTGACAGCCGC +
Preference number: 5 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPVADLS*AALDSR
Trigger: GCGGCTGTCAAGGGCAGCCAAGGACAGGTCTGCCAC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGTCATTGATGCCCACGTaGAAGAGGACGGGCTGCACT +
Preference number: 5 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMSLMPT*KRTGCT
Trigger: AGTGCAGCCCGTCCTCTTCAACGTGGGCATCAATGA...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATTCATTGATGCCCACGTaGAAGAGGACGGGCTGCACT +
Preference number: 5 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNSLMPT*KRTGCT
Trigger: AGTGCAGCCCGTCCTCTTCAACGTGGGCATCAATGA...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CAGCCTGCTAAACACAAGTTTCCATCTGTACAACCCAGCGCTCTCTCTGCCAGAACCAAACTCTCCACGTaGATGACTTCTTGTAAAGAC +
Preference number: 5 (lower is better)
Translates to: QPAKHKFPSVQPSALSARTKLST*MTSCKD
Trigger: GTCTTTACAAGAAGTCATCAACGTGGAGAGTTTGGT...TCTGGCAGAGAGAGCGCTGGGTTGTACAGATGGAAACTTGTGTTTAGCAGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TCCAGATCCGAGGGGACTGATACAGACCAGGCCTTGGGGTGCATGGATGGAAATTCAGACAAACCTAGCTaGATTCATGTAGGTAACTAT +
Preference number: 5 (lower is better)
Translates to: SRSEGTDTDQALGCMDGNSDKPS*IHVGNY
Trigger: ATAGTTACCTACATGAATCAAGCTAGGTTTGTCTGA...ATTTCCATCCATGCACCCCAAGGCCTGGTCTGTATCAGTCCCCTCGGATCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGACCTTACTGCTGGCTTaGTGTCTCCAGCAGACTCCC +
Preference number: 5 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMTLLLA*CLQQTP
Trigger: GGGAGTCTGCTGGAGACACAAAGCCAGCAGTAAGGT...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATCAGAGGCCGCGCTGCTaGGTGTTCACAGGAATGAAA +
Preference number: 5 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNQRPRC*VFTGMK
Trigger: TTTCATTCCTGTGAACACCAAGCAGCGCGGCCTCTG...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCGCTGTCATGATGTCATaGGTGATGATGTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSAVMMS*VMMCFL
Trigger: CAAGAAGCACATCATCACCAATGACATCATGACAGC...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp GACTGGGTTACCCACAGAGATGATGTGATCCATGTTCACAGACGGGAAGGTAACCACGGAGAGTTTGACTaGTGTCATCTGATTGATAAG +
Preference number: 5 (lower is better)
Translates to: DWVTHRDDVIHVHRREGNHGEFD*CHLIDK
Trigger: CTTATCAATCAGATGACACAAGTCAAACTCTCCGTG...GTTACCTTCCCGTCTGTGAACATGGATCACATCATCTCTGTGGGTAACCCAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTATCCTGGAGCAGATCTTaGACAATGAACGTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLSWSRS*TMNVPE
Trigger: CTCTGGAACGTTCATTGTCAAAGATCTGCTCCAGGA...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCAATTTGTGCAGCTTTTaGCGGAGACCTCCTGACTTA +
Preference number: 5 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSNLCSF*RRPPDL
Trigger: TAAGTCAGGAGGTCTCCGCAAAAAGCTGCACAAATT...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATAGTGTCTGCTGCTCATaGATGCCCACGTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNSVCCS*MPTLKR
Trigger: CCTCTTCAACGTGGGCATCAATGAGCAGCAGACACT...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTCGGTCCTTAGCGCTCTaGCAGCTGGTGAACCGGACC +
Preference number: 5 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPRSLAL*QLVNRT
Trigger: GGTCCGGTTCACCAGCTGCAAGAGCGCTAAGGACCG...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CAA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTCGGTCCTTAGCGCTCTaGCAGCTGGTGAACCGGACC +
Preference number: 5 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIRSLAL*QLVNRT
Trigger: GGTCCGGTTCACCAGCTGCAAGAGCGCTAAGGACCG...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCACCCCTGGCCCAAGTTaGTTACATGTTTCTAAAGGA +
Preference number: 5 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSTPGPS*LHVSKG
Trigger: TCCTTTAGAAACATGTAACAAACTTGGGCCAGGGGT...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS GCA 90 bp GACTGGCAGCCAGATGATGTATGTTTCTTGGTCTCTTCAAATTTGTaGAGCTTTTTGCGGAGACCTCCTGACTTAAAACCTTGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: DWQPDDVCFLVSSNL*SFLRRPPDLKPWQC
Trigger: ACACTGCCAAGGTTTTAAGTCAGGAGGTCTCCGCAAAAAGCTGCACAAATTTGAAGAGACCAAGAAACATACATCATCTGGCTGCCAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409851.8
CDS-3UTR CAA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGTACTGGGTGACAATTaGGCGCCGGAGGCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIVLGDN*APEALP
Trigger: TGGGAGAGCCTCCGGCGCCAAATTGTCACCCAGTAC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTATGCGTAGTAACTCACTaGGGTTTTCAGGGTGTTGAT +
Preference number: 5 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLCVVTH*GFQGVD
Trigger: ATCAACACCCTGAAAACCCAAGTGAGTTACTACGCA...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTTGTCCTTGGCTGCCCTaGACAGCCGCTCTGCGTAGT +
Preference number: 5 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPICPWLP*TAALRS
Trigger: ACTACGCAGAGCGGCTGTCAAGGGCAGCCAAGGACA...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTAGCCCATGGATGGAGTaGGCCAGGAGCTTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: SICQVLQFYGDPLHRAKISPWME*ARSLQS
Trigger: CGACTGCAAGCTCCTGGCCAACTCCATCCATGGGCT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCAATACCATGGCCTTCTaGGCCTTGTCACTCATCATG +
Preference number: 5 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTANTMAF*ALSLIM
Trigger: CATGATGAGTGACAAGGCCAAGAAGGCCATGGTATT...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTTCATGTCCTCCAGCATaGCCAGCTCCTCCCCGTAGG +
Preference number: 5 (lower is better)
Translates to: SICQVLQFYGDPLHRAKISCPPA*PAPPRR
Trigger: CCTACGGGGAGGAGCTGGCAATGCTGGAGGACATGA...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAATCATTGATGCCCACGTaGAAGAGGACGGGCTGCACT +
Preference number: 5 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKSLMPT*KRTGCT
Trigger: AGTGCAGCCCGTCCTCTTCAACGTGGGCATCAATGA...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CAA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCGCTGTCATGATGTCATaGGTGATGATGTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAAVMMS*VMMCFL
Trigger: CAAGAAGCACATCATCACCAATGACATCATGACAGC...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGTCCTGGAGCAGATCTTaGACAATGAACGTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMSWSRS*TMNVPE
Trigger: CTCTGGAACGTTCATTGTCAAAGATCTGCTCCAGGA...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTACGCAATGAAGCGTATTaGGATCGGATTCCTAACGCC +
Preference number: 5 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLRNEAY*DRIPNA
Trigger: GGCGTTAGGAATCCGATCCAAATACGCTTCATTGCG...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTACCAGCTGCCGTGTCTaGTCTGCCAAGATGGCGAGT +
Preference number: 5 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPITSCRV*SAKMAS
Trigger: ACTCGCCATCTTGGCAGACAAGACACGGCAGCTGGT...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTTACGGTAACCTGTAAAACTGCCTTCCCTGCACCTCTGAAAACCCAAAGCTCCGATTACTTCCTACTTTaGGAAATAACCAGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: FTVTCKTAFPAPLKTQSSDYFLL*EITRVS
Trigger: AGAGACCCTGGTTATTTCCAAAAGTAGGAAGTAATC...GGAGCTTTGGGTTTTCAGAGGTGCAGGGAAGGCAGTTTTACAGGTTACCGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTTGTCCACGGTGCTGGTaGGTACCCACAGTTAGCGTC +
Preference number: 5 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPICPRCW*VPTVSV
Trigger: GACGCTAACTGTGGGTACCAACCAGCACCGTGGACA...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAACAAGCTACTCTCCGTTaGCCTACTGTTGGCACAGGA +
Preference number: 5 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKQATLR*PTVGTG
Trigger: TCCTGTGCCAACAGTAGGCAAACGGAGAGTAGCTTG...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGTAGCCTGGACATGTTaGCTCTCGGACCATGTGGCA +
Preference number: 5 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPVAWTC*LSDHVA
Trigger: TGCCACATGGTCCGAGAGCAAACATGTCCAGGCTAC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CAA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTGTAGCCTGGACATGTTaGCTCTCGGACCATGTGGCA +
Preference number: 5 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIVAWTC*LSDHVA
Trigger: TGCCACATGGTCCGAGAGCAAACATGTCCAGGCTAC...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGCTGTCATGATGTCATaGGTGATGATGTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNAVMMS*VMMCFL
Trigger: CAAGAAGCACATCATCACCAATGACATCATGACAGC...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATCCGCAACAAAACTATTaGGCTTTCGATCTAGCGATG +
Preference number: 5 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNPQQNY*AFDLAM
Trigger: CATCGCTAGATCGAAAGCCAAATAGTTTTGTTGCGG...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AGCCATGGAGATGCAAGTGTGTTTCCTACCCTGTCTGCTCAGCTTTTTCTGTTAAGAAATATAGGATTGTaGGTTCCCTCAATGATCTCC +
Preference number: 5 (lower is better)
Translates to: SHGDASVFPTLSAQLFLLRNIGL*VPSMIS
Trigger: GGAGATCATTGAGGGAACCAACAATCCTATATTTCT...TAACAGAAAAAGCTGAGCAGACAGGGTAGGAAACACACTTGCATCTCCATGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTAGAACCATCCTCCCATaGACAGTGTCCACAGACCGG +
Preference number: 5 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIRTILP*TVSTDR
Trigger: CCGGTCTGTGGACACTGTCAATGGGAGGATGGTTCT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTTGGGCGATGATCTCCTaGGCTCTGACAACATCCTGG +
Preference number: 5 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIWAMIS*ALTTSW
Trigger: CCAGGATGTTGTCAGAGCCAAGGAGATCATCGCCCA...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATACTATGTGGGGTACCTaGCAGGTGTTACCTTCTAAT +
Preference number: 5 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNTMWGT*QVLPSN
Trigger: ATTAGAAGGTAACACCTGCAAGGTACCCCACATAGT...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTACCTTACTGCTGGCTTaGTGTCTCCAGCAGACTCCC +
Preference number: 5 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPTLLLA*CLQQTP
Trigger: GGGAGTCTGCTGGAGACACAAAGCCAGCAGTAAGGT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTACCTTACTGCTGGCTTaGTGTCTCCAGCAGACTCCC +
Preference number: 5 (lower is better)
Translates to: SICQVLQFYGDPLHRAKITLLLA*CLQQTP
Trigger: GGGAGTCTGCTGGAGACACAAAGCCAGCAGTAAGGT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATACCCCTGGCCCAAGTTaGTTACATGTTTCTAAAGGA +
Preference number: 5 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNTPGPS*LHVSKG
Trigger: TCCTTTAGAAACATGTAACAAACTTGGGCCAGGGGT...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGGACTGCAATCTTTCTaGCTGGTGCAGCTGCCTGCA +
Preference number: 5 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIGLQSF*LVQLPA
Trigger: TGCAGGCAGCTGCACCAGCAAGAAAGATTGCAGTCC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409016.8
CDS-3UTR CAA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACTGCGTAGTAACTCACTaGGGTTTTCAGGGTGTTGAT +
Preference number: 5 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNCVVTH*GFQGVD
Trigger: ATCAACACCCTGAAAACCCAAGTGAGTTACTACGCA...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTAGTGTCTGCTGCTCATaGATGCCCACGTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPISVCCS*MPTLKR
Trigger: CCTCTTCAACGTGGGCATCAATGAGCAGCAGACACT...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CAA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATACCAAACTCTCCACGTaGATGACTTCTTGTAAAGAC +
Preference number: 5 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNTKLST*MTSCKD
Trigger: GTCTTTACAAGAAGTCATCAACGTGGAGAGTTTGGT...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGCAGATCTCAGCAGCTaGCCAGAGAATGTCGACGTT +
Preference number: 5 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPADLSS*PENVDV
Trigger: AACGTCGACATTCTCTGGCAAGCTGCTGAGATCTGC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CAA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTACAGTGAACTCAGCTTaGAGGGAGCAGCAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPITVNSA*REQQRA
Trigger: AGCTCTCTGCTGCTCCCTCAAAGCTGAGTTCACTGT...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp ATCATAAGGAACACTGGACGGAACCTCTGTTTTACGGTAACCTGTAAAACTGCCGCTTGGCAAATACAATaGTGTAGGGACAAAACTGTA +
Preference number: 5 (lower is better)
Translates to: IIRNTGRNLCFTVTCKTAAWQIQ*CRDKTV
Trigger: TACAGTTTTGTCCCTACACAATTGTATTTGCCAAGC...GGCAGTTTTACAGGTTACCGTAAAACAGAGGTTCCGTCCAGTGTTCCTTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGAAGTGGAACTGCATTTaGACAAGTCATACAACGAGG +
Preference number: 5 (lower is better)
Translates to: FTNMYSAPEHSMQCPRTMKWNCI*TSHTTR
Trigger: CCTCGTTGTATGACTTGTCAAAATGCAGTTCCACTT...CATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS GCA 90 bp ATAATGATATTCATTTGCAACGCAATTTGGTCACCAGGTATGCTATaGTCAGAAAGAGCCACACAATCAGTAAATTGGGGCTCAGAGCTA +
Preference number: 5 (lower is better)
Translates to: IMIFICNAIWSPGML*SERATQSVNWGSEL
Trigger: TAGCTCTGAGCCCCAATTTACTGATTGTGTGGCTCTTTCTGAGCATAGCATACCTGGTGACCAAATTGCGTTGCAAATGAATATCATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409540.7
CDS-3UTR CAA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGGGCTCATCTGGGTCTaGTATATTTCCTGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIGLIWV*YISCQR
Trigger: TCTCTGGCAGGAAATATACAAGACCCAGATGAGCCC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CAA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTGGGCTCATCTGGGTCTaGTATATTTCCTGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPGLIWV*YISCQR
Trigger: TCTCTGGCAGGAAATATACAAGACCCAGATGAGCCC...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CAA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAAAATTTGTGCAGCTTTTaGCGGAGACCTCCTGACTTA +
Preference number: 5 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKNLCSF*RRPPDL
Trigger: TAAGTCAGGAGGTCTCCGCAAAAAGCTGCACAAATT...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp GTTTACAAACATGTATTCAGCACCCGAGCACTCAATGCAATGCCCAAGAACAATGCTTGGCAAATACAATaGTGTAGGGACAAAACTGTA +
Preference number: 5 (lower is better)
Translates to: VYKHVFSTRALNAMPKNNAWQIQ*CRDKTV
Trigger: TACAGTTTTGTCCCTACACAATTGTATTTGCCAAGC...ATTGTTCTTGGGCATTGCATTGAGTGCTCGGGTGCTGAATACATGTTTGTAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CACATGGCTAATCATTTCTGTTCTTGGAAAAATCACAAATCGGGAAGCTCCAACCTCAAAAGTCATCATTaGGCCACCAGACAAATCGTA +
Preference number: 5 (lower is better)
Translates to: HMANHFCSWKNHKSGSSNLKSHH*ATRQIV
Trigger: TACGATTTGTCTGGTGGCCAAATGATGACTTTTGAG...GTTGGAGCTTCCCGATTTGTGATTTTTCCAAGAACAGAAATGATTAGCCATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS GCA 90 bp TTTTTAGTATATTCTTATCTGATCCTGAGAAAGAGAGCATGCAGGTaGCAATGTTGCCTTTTATACAATAGGGAACTGAGGGCTAGAGAG +
Preference number: 5 (lower is better)
Translates to: FLVYSYLILRKRACR*QCCLLYNRELRARE
Trigger: CTCTCTAGCCCTCAGTTCCCTATTGTATAAAAGGCAACATTGGCACCTGCATGCTCTCTTTCTCAGGATCAGATAAGAATATACTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS GCA 90 bp ATCCACTTTTTAGTATATTCTTATCTGATCCTGAGAAAGAGAGCATaGAGGTGCCAATGTTGCCTTTTATACAATAGGGAACTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: IHFLVYSYLILRKRA*RCQCCLLYNRELRA
Trigger: AGCCCTCAGTTCCCTATTGTATAAAAGGCAACATTGGCACCTGCATGCTCTCTTTCTCAGGATCAGATAAGAATATACTAAAAAGTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS-3UTR CAA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTTCCTGGAGCAGATCTTaGACAATGAACGTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SICQVLQFYGDPLHRAKISWSRS*TMNVPE
Trigger: CTCTGGAACGTTCATTGTCAAAGATCTGCTCCAGGA...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp ACTGTAAGCACAACACAGGACTTACACCAAGATGATTCCAGATGGATTGATCTATTACTATCCACACTATaGAGCCAAACATTACCTCCT +
Preference number: 5 (lower is better)
Translates to: TVSTTQDLHQDDSRWIDLLLSTL*SQTLPP
Trigger: AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAA...TAGATCAATCCATCTGGAATCATCTTGGTGTAAGTCCTGTGTTGTGCTTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGCTGTCATGATGTCATaGGTGATGATGTGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIAVMMS*VMMCFL
Trigger: CAAGAAGCACATCATCACCAATGACATCATGACAGC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CAA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTCCGCAACAAAACTATTaGGCTTTCGATCTAGCGATG +
Preference number: 5 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPPQQNY*AFDLAM
Trigger: CATCGCTAGATCGAAAGCCAAATAGTTTTGTTGCGG...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CAA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTAATTTGTGCAGCTTTTaGCGGAGACCTCCTGACTTA +
Preference number: 5 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPINLCSF*RRPPDL
Trigger: TAAGTCAGGAGGTCTCCGCAAAAAGCTGCACAAATT...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTACTATGTGGGGTACCTaGCAGGTGTTACCTTCTAAT +
Preference number: 5 (lower is better)
Translates to: SICQVLQFYGDPLHRAKITMWGT*QVLPSN
Trigger: ATTAGAAGGTAACACCTGCAAGGTACCCCACATAGT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTACCCCTGGCCCAAGTTaGTTACATGTTTCTAAAGGA +
Preference number: 5 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPTPGPS*LHVSKG
Trigger: TCCTTTAGAAACATGTAACAAACTTGGGCCAGGGGT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTATGAGGAAGGTACTGTaGTTGTCCACACTTTGCACA +
Preference number: 5 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIMRKVL*LSTLCT
Trigger: TGTGCAAAGTGTGGACAACAACAGTACCTTCCTCAT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTATGAGGAAGGTACTGTaGTTGTCCACACTTTGCACA +
Preference number: 5 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIMRKVL*LSTLCT
Trigger: TGTGCAAAGTGTGGACAACAACAGTACCTTCCTCAT...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAACTTAGAAATATAGGATaGTTGGTTCCCTCAATGATC +
Preference number: 5 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKLRNIG*LVPSMI
Trigger: GATCATTGAGGGAACCAACAATCCTATATTTCTAAG...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTCACGGAGAGTTTGACTaGTGTCATCTGATTGATAAG +
Preference number: 5 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIHGEFD*CHLIDK
Trigger: CTTATCAATCAGATGACACAAGTCAAACTCTCCGTG...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTTTGAACTCTCATCCTTaGTATGTGCAAGTTTGTGGG +
Preference number: 5 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPILNSHP*YVQVCG
Trigger: CCCACAAACTTGCACATACAAAGGATGAGAGTTCAA...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTTTGAACTCTCATCCTTaGTATGTGCAAGTTTGTGGG +
Preference number: 5 (lower is better)
Translates to: SICQVLQFYGDPLHRAKILNSHP*YVQVCG
Trigger: CCCACAAACTTGCACATACAAAGGATGAGAGTTCAA...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTACCAAACTCTCCACGTaGATGACTTCTTGTAAAGAC +
Preference number: 5 (lower is better)
Translates to: SICQVLQFYGDPLHRAKITKLST*MTSCKD
Trigger: GTCTTTACAAGAAGTCATCAACGTGGAGAGTTTGGT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTACCAAACTCTCCACGTaGATGACTTCTTGTAAAGAC +
Preference number: 5 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPITKLST*MTSCKD
Trigger: GTCTTTACAAGAAGTCATCAACGTGGAGAGTTTGGT...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CAA 90 bp CTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTCCAATGGGGAAAAATCAGACAAACCTAGCTaGATTCATGTAGGTAACTAT +
Preference number: 5 (lower is better)
Translates to: LSTLLSQTLPPIDSNGEKSDKPS*IHVGNY
Trigger: ATAGTTACCTACATGAATCAAGCTAGGTTTGTCTGA...TTTTTCCCCATTGGAATCAATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTCAGATCAAGATAACATaGCCTGAACCCCCTGTAATT +
Preference number: 5 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIQIKIT*PEPPVI
Trigger: AATTACAGGGGGTTCAGGCAATGTTATCTTGATCTG...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTAGAAATATAGGATTGTaGGTTCCCTCAATGATCTCC +
Preference number: 5 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIRNIGL*VPSMIS
Trigger: GGAGATCATTGAGGGAACCAACAATCCTATATTTCT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTAGCCCAGTAAATACATaGTTCCCTGAGATCTATCTT +
Preference number: 5 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPSPVNT*FPEIYL
Trigger: AAGATAGATCTCAGGGAACAATGTATTTACTGGGCT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTTTACTATCCACACTATaGAGCCAAACATTACCTCCT +
Preference number: 5 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPILLSTL*SQTLPP
Trigger: AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAA...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS-3UTR CAA 90 bp TTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGATTACTTCCTACTTTaGGAAATAACCAGGGTCTCT +
Preference number: 5 (lower is better)
Translates to: LNRQLLLSTLLSQTLPPIDYFLL*EITRVS
Trigger: AGAGACCCTGGTTATTTCCAAAAGTAGGAAGTAATC...AATAGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AGCATTTGCCAAGTCTTACAGTTTTATGGTGACCCATTACATAGAGCAAAAATTATTGATAAGAGAGTCTaGAAAGAAGGCAATACTGCT +
Preference number: 5 (lower is better)
Translates to: SICQVLQFYGDPLHRAKIIDKRV*KEGNTA
Trigger: AGCAGTATTGCCTTCTTTCAAGACTCTCTTATCAAT...AATTTTTGCTCTATGTAATGGGTCACCATAAAACTGTAAGACTTGGCAAATGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS-3UTR CAA 90 bp AATTTAAATAGGCAGTTGTTACTATCCACACTATTGAGCCAAACATTACCTCCTATTGATAAGAGAGTCTaGAAAGAAGGCAATACTGCT +
Preference number: 5 (lower is better)
Translates to: NLNRQLLLSTLLSQTLPPIDKRV*KEGNTA
Trigger: AGCAGTATTGCCTTCTTTCAAGACTCTCTTATCAAT...AGGAGGTAATGTTTGGCTCAATAGTGTGGATAGTAACAACTGCCTATTTAAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409851.8
CDS GCA 72 bp GGCTGTGAAGTCGCGGGCTGCGGGCCCGGCCTCAGGTaGTGGTCCTCCTGCCCCGGCCCACGGAGCCCGACC +
Preference number: 6 (lower is better)
Translates to: GCEVAGCGPGLR*WSSCPGPRSPT
Trigger: GGTCGGGCTCCGTGGGCCGGGGCAGGAGGACCAGCACCTGAGGCCGGGCCCGCAGCCCGCGACTTCACAGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS CCA 72 bp TGTGAAGTCGCGGGCTGCGGGCCCGGCCTCAGGTGCTaGTCCTCCTGCCCCGGCCCACGGAGCCCGACCCGG +
Preference number: 6 (lower is better)
Translates to: CEVAGCGPGLRC*SSCPGPRSPTR
Trigger: CCGGGTCGGGCTCCGTGGGCCGGGGCAGGAGGACCAGCACCTGAGGCCGGGCCCGCAGCCCGCGACTTCACA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
CDS CAA 90 bp GGCCCAGCATGTCGGCCGCCACGTCGATGGTGGAAGCCCGCTGCATaGCACGGGCCCTGGCACCATGGCGAGGGCTGTGCTCTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: GPACRPPRRWWKPAA*HGPWHHGEGCALLL
Trigger: CAGCAAGAGAGCACAGCCCTCGCCATGGTGCCAGGGCCCGTGCAATGCAGCGGGCTTCCACCATCGACGTGGCGGCCGACATGCTGGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000463367.1
ENST00000523221.1
CDS GCA 72 bp AGCATGTCGGCCGCCACGTCGATGGTGGAAGCCCGCTaGATTGCACGGGCCCTGGCACCATGGCGAGGGCTG +
Preference number: 6 (lower is better)
Translates to: SMSAATSMVEAR*IARALAPWRGL
Trigger: CAGCCCTCGCCATGGTGCCAGGGCCCGTGCAATGCAGCGGGCTTCCACCATCGACGTGGCGGCCGACATGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000463367.1
ENST00000523221.1
CDS GCA 72 bp CAACCGGAGACTCCGCTCTCACTGCCTGCTGCTCCATaGACTGGGACGCCCCCGCTCCACCTGGCAGCCCTC +
Preference number: 6 (lower is better)
Translates to: QPETPLSLPAAP*TGTPPLHLAAL
Trigger: GAGGGCTGCCAGGTGGAGCGGGGGCGTCCCAGTGCATGGAGCAGCAGGCAGTGAGAGCGGAGTCTCCGGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468638.1
CDS CCA 72 bp CCAGAGAGAGGCCCAGCATGTCGGCCGCCACGTCGATaGTGGAAGCCCGCTGCATTGCACGGGCCCTGGCAC +
Preference number: 6 (lower is better)
Translates to: PERGPACRPPRR*WKPAALHGPWH
Trigger: GTGCCAGGGCCCGTGCAATGCAGCGGGCTTCCACCATCGACGTGGCGGCCGACATGCTGGGCCTCTCTCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000463367.1
ENST00000523221.1
CDS CCA 72 bp GAGAGAGGCCCAGCATGTCGGCCGCCACGTCGATGGTaGAAGCCCGCTGCATTGCACGGGCCCTGGCACCAT +
Preference number: 6 (lower is better)
Translates to: ERGPACRPPRRW*KPAALHGPWHH
Trigger: ATGGTGCCAGGGCCCGTGCAATGCAGCGGGCTTCCACCATCGACGTGGCGGCCGACATGCTGGGCCTCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000463367.1
ENST00000523221.1
CDS CCA 72 bp GGCTGTGGCAGCGCCTGCACAGAGAGGCCGGCACTCTaGGACCAGCTTTCCCTCCAAGGTAGGGTCCACCCC +
Preference number: 6 (lower is better)
Translates to: GCGSACTERPAL*DQLSLQGRVHP
Trigger: GGGGTGGACCCTACCTTGGAGGGAAAGCTGGTCCCAGAGTGCCGGCCTCTCTGTGCAGGCGCTGCCACAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467042.1
CDS CCA 72 bp AAGAGGACGGGCTGCACTCGCAGCAGCATGCCACTCTaGATCTCCCGGGGCAAGGCGTCAAACAGCGGGCCC +
Preference number: 6 (lower is better)
Translates to: KRTGCTRSSMPL*ISRGKASNSGP
Trigger: GGGCCCGCTGTTTGACGCCTTGCCCCGGGAGATCCAGAGTGGCATGCTGCTGCGAGTGCAGCCCGTCCTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000467042.1
ENST00000523221.1
CDS CCA 72 bp CGTCGATGGTGGAAGCCCGCTGCATTGCACGGGCCCTaGCACCATGGCGAGGGCTGTGCTCTCTTGCTGTCA +
Preference number: 6 (lower is better)
Translates to: RRWWKPAALHGP*HHGEGCALLLS
Trigger: TGACAGCAAGAGAGCACAGCCCTCGCCATGGTGCCAGGGCCCGTGCAATGCAGCGGGCTTCCACCATCGACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000463367.1
ENST00000523221.1
CDS CCA 72 bp GGCATGCACGTTCTGACCCAGAAACCGCAGCAGCTCTaGCAGGCACGTCTGACTGCGAGACCGAGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: GMHVLTQKPQQL*QARLTARPRQA
Trigger: GGCCTGCCTCGGTCTCGCAGTCAGACGTGCCTGCCAGAGCTGCTGCGGTTTCTGGGTCAGAACGTGCATGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498026.1
CDS GCA 72 bp TCCAGGGCCTGGGTGAAGACCTGCGGGGCCATGCCATaGTCGTGTTGCAGGATCAGGCACTGCTCCAGTGTC +
Preference number: 6 (lower is better)
Translates to: SRAWVKTCGAMP*SCCRIRHCSSV
Trigger: GACACTGGAGCAGTGCCTGATCCTGCAACACGAGCATGGCATGGCCCCGCAGGTCTTCACCCAGGCCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000498026.1
ENST00000523221.1
CDS GCA 72 bp GTTACATGGAAAGGCAACCGGAGACTCCGCTCTCACTaGCTGCTGCTCCATGCACTGGGACGCCCCCGCTCC +
Preference number: 6 (lower is better)
Translates to: VTWKGNRRLRSH*LLLHALGRPRS
Trigger: GGAGCGGGGGCGTCCCAGTGCATGGAGCAGCAGGCAGTGAGAGCGGAGTCTCCGGTTGCCTTTCCATGTAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468638.1
CDS CCA 72 bp TGCTCAGCAGGCTCTCGAACTGGGCCAGCAGCCCGATaGTGTAGAGCTGGCGCAGGAAGCCGTCGTCATGCA +
Preference number: 6 (lower is better)
Translates to: CSAGSRTGPAAR*CRAGAGSRRHA
Trigger: TGCATGACGACGGCTTCCTGCGCCAGCTCTACACCATCGGGCTGCTGGCCCAGTTCGAGAGCCTGCTGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 72 bp GGCATGCACGTTCTGACCCAGAAACCGCAGCAGCTCTaGCAGGCACGTCTGACTGCGAGACCGAGGCAGGCA +
Preference number: 6 (lower is better)
Translates to: GMHVLTQKPQQL*QARLTARPRQA
Trigger: TGCCTGCCTCGGTCTCGCAGTCAGACGTGCCTGCCAGAGCTGCTGCGGTTTCTGGGTCAGAACGTGCATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 72 bp CAGCGTGGAAACGTATGTAGAGCCCAGCCCAGTGTCTaGCACATCCGTGACCTTCTGACGCGTGGCGCCCCC +
Preference number: 6 (lower is better)
Translates to: QRGNVCRAQPSV*HIRDLLTRGAP
Trigger: GGGGGCGCCACGCGTCAGAAGGTCACGGATGTGCCAGACACTGGGCTGGGCTCTACATACGTTTCCACGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467042.1
CDS CAA 90 bp TCAGGCCGTGCAGCGTTCAGCCCATGGATGGAGTTGGCCAGGAGCTaGCAGTCGCAGACCGTGACCAGCTGCCGTGTCTTGTCTGCCAAG +
Preference number: 6 (lower is better)
Translates to: SGRAAFSPWMELARS*QSQTVTSCRVLSAK
Trigger: CTTGGCAGACAAGACACGGCAGCTGGTCACGGTCTGCGACTGCAAGCTCCTGGCCAACTCCATCCATGGGCTGAACGCTGCACGGCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CAA 90 bp CAGCCTCGCCCTGGCGTACACAGGTCCTGTGCTAATTACTTCACGTaGCTGCTGAGTGCTCCACACCACGCCGGTCAGGGGACAGGGCAG +
Preference number: 6 (lower is better)
Translates to: QPRPGVHRSCANYFT*LLSAPHHAGQGTGQ
Trigger: CTGCCCTGTCCCCTGACCGGCGTGGTGTGGAGCACTCAGCAGCAACGTGAAGTAATTAGCACAGGACCTGTGTACGCCAGGGCGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498026.1
CDS GCA 72 bp CTGGCTGCATCTTCCTCTAGTAGGAGCTTCACGAACTaGCGGGGCACGTGCAGGGAGAGCACGCTCTCTGCC +
Preference number: 6 (lower is better)
Translates to: LAASSSSRSFTN*RGTCRESTLSA
Trigger: GGCAGAGAGCGTGCTCTCCCTGCACGTGCCCCGGCAGTTCGTGAAGCTCCTACTAGAGGAAGATGCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 72 bp GTGGAAGCCCGCTGCATTGCACGGGCCCTGGCACCATaGCGAGGGCTGTGCTCTCTTGCTGTCATGATGTCA +
Preference number: 6 (lower is better)
Translates to: VEARCIARALAP*RGLCSLAVMMS
Trigger: TGACATCATGACAGCAAGAGAGCACAGCCCTCGCCATGGTGCCAGGGCCCGTGCAATGCAGCGGGCTTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000463367.1
CDS TCA 72 bp GGATGGAGTTGGCCAGGAGCTTGCAGTCGCAGACCGTaGCCAGCTGCCGTGTCTTGTCTGCCAAGATGGCGA +
Preference number: 6 (lower is better)
Translates to: GWSWPGACSRRP*PAAVSCLPRWR
Trigger: TCGCCATCTTGGCAGACAAGACACGGCAGCTGGTCACGGTCTGCGACTGCAAGCTCCTGGCCAACTCCATCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS TCA 72 bp GAAAAGGGGAGAGGAGCGCTGGGTAGCATTGGGCTCTaGTGGAGAGGCGTCTCAGGCCTCCTGGGTAAGCAC +
Preference number: 6 (lower is better)
Translates to: EKGRGALGSIGL*WRGVSGLLGKH
Trigger: GTGCTTACCCAGGAGGCCTGAGACGCCTCTCCATCAGAGCCCAATGCTACCCAGCGCTCCTCTCCCCTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS GCA 72 bp GAACTGCCGGGGCACGTGCAGGGAGAGCACGCTCTCTaGCATCTGCTCCAGGATCCGCAAATGGTTACCATC +
Preference number: 6 (lower is better)
Translates to: ELPGHVQGEHAL*HLLQDPQMVTI
Trigger: GATGGTAACCATTTGCGGATCCTGGAGCAGATGGCAGAGAGCGTGCTCTCCCTGCACGTGCCCCGGCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS GCA 72 bp AGTGGGAGAGGCCTTGGAGGCAATGTAGTCAGGCCGTaGAGCGTTCAGCCCATGGATGGAGTTGGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: SGRGLGGNVVRP*SVQPMDGVGQE
Trigger: CTCCTGGCCAACTCCATCCATGGGCTGAACGCTGCACGGCCTGACTACATTGCCTCCAAGGCCTCTCCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS GCA 72 bp CACACTTTCTCCCACTCCTCCTCGTGCCAGTCCACCTaGAGGGAAGATCGGCTGTTTCTCCCTGTCCACCGG +
Preference number: 6 (lower is better)
Translates to: HTFSHSSSCQST*REDRLFLPVHR
Trigger: CCGGTGGACAGGGAGAAACAGCCGATCTTCCCTGCAGGTGGACTGGCACGAGGAGGAGTGGGAGAAAGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000468638.1
ENST00000523221.1
CDS GCA 72 bp TGCTGCTCATTGATGCCCACGTTGAAGAGGACGGGCTaGACTCGCAGCAGCATGCCACTCTGGATCTCCCGG +
Preference number: 6 (lower is better)
Translates to: CCSLMPTLKRTG*TRSSMPLWISR
Trigger: CCGGGAGATCCAGAGTGGCATGCTGCTGCGAGTGCAGCCCGTCCTCTTCAACGTGGGCATCAATGAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000467042.1
ENST00000523221.1
CDS CCA 72 bp TGTCTGCCAAGATGGCGAGTGTCCTCTCAAGGCCAGTaGCAGACCTGTCCTTGGCTGCCCTTGACAGCCGCT +
Preference number: 6 (lower is better)
Translates to: CLPRWRVSSQGQ*QTCPWLPLTAA
Trigger: AGCGGCTGTCAAGGGCAGCCAAGGACAGGTCTGCCACTGGCCTTGAGAGGACACTCGCCATCTTGGCAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 72 bp TCACCTGCTCCTCCTCAGTCGAAGTGGGAGAGGCCTTaGAGGCAATGTAGTCAGGCCGTGCAGCGTTCAGCC +
Preference number: 6 (lower is better)
Translates to: SPAPPQSKWERP*RQCSQAVQRSA
Trigger: GGCTGAACGCTGCACGGCCTGACTACATTGCCTCCAAGGCCTCTCCCACTTCGACTGAGGAGGAGCAGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 72 bp GCATTGGGCTCTGATGGAGAGGCGTCTCAGGCCTCCTaGGTAAGCACAGTGATGCCACGTATCGCTGACCCC +
Preference number: 6 (lower is better)
Translates to: ALGSDGEASQAS*VSTVMPRIADP
Trigger: GGGGTCAGCGATACGTGGCATCACTGTGCTTACCCAGGAGGCCTGAGACGCCTCTCCATCAGAGCCCAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CAA 72 bp AGTGTCACCGACATGGCTGTACGGTCCTTAGCGCTCTaGCAGCTGGTGAACCGGACCCCATTAAGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: SVTDMAVRSLAL*QLVNRTPLRRR
Trigger: CCGCCGCCTTAATGGGGTCCGGTTCACCAGCTGCAAGAGCGCTAAGGACCGTACAGCCATGTCGGTGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000498026.1
ENST00000523221.1
CDS CAA 90 bp GGCGCGCTGTCCTGCATGAGCAGGAATACCATGGCCTTCTTGGCCTaGTCACTCATCATGGCCACGCAGTCGGTGAGAGTGGTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: GALSCMSRNTMAFLA*SLIMATQSVRVVSS
Trigger: GCTGCTGACCACTCTCACCGACTGCGTGGCCATGATGAGTGACAAGGCCAAGAAGGCCATGGTATTCCTGCTCATGCAGGACAGCGCGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CAA 90 bp CACTGCTCCAGTGTCACCGACATGGCTGTACGGTCCTTAGCGCTCTaGCAGCTGGTGAACCGGACCCCATTAAGGCGGCGGCAGATCTCA +
Preference number: 6 (lower is better)
Translates to: HCSSVTDMAVRSLAL*QLVNRTPLRRRQIS
Trigger: TGAGATCTGCCGCCGCCTTAATGGGGTCCGGTTCACCAGCTGCAAGAGCGCTAAGGACCGTACAGCCATGTCGGTGACACTGGAGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000498026.1
ENST00000523221.1
CDS TCA 72 bp AGTGTCCACAGACCGGGTCACAGGGGGCCGTTGGTCTaGCTTCTCCTCCATCTGCCAGCCAATCACGGTGAT +
Preference number: 6 (lower is better)
Translates to: SVHRPGHRGPLV*LLLHLPANHGD
Trigger: ATCACCGTGATTGGCTGGCAGATGGAGGAGAAGTCAGACCAACGGCCCCCTGTGACCCGGTCTGTGGACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS TCA 72 bp CTCGGATGGGCACCAGGCCGCTCAAGTTCTTCTGGGTaGCTACCTCCCGTGTTCCAATGCTGCGCATGCACT +
Preference number: 6 (lower is better)
Translates to: LGWAPGRSSSSG*LPPVFQCCACT
Trigger: AGTGCATGCGCAGCATTGGAACACGGGAGGTAGTCACCCAGAAGAACTTGAGCGGCCTGGTGCCCATCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409540.7
CDS GCA 72 bp AGTAGGCGTGGCTGTCCGGGTTACCTTTCTTGCTGGTaGAGCTGCCTGCACAGGGGAAGACATCCTCACAGC +
Preference number: 6 (lower is better)
Translates to: SRRGCPGYLSCW*SCLHRGRHPHS
Trigger: GCTGTGAGGATGTCTTCCCCTGTGCAGGCAGCTGCACCAGCAAGAAAGGTAACCCGGACAGCCACGCCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409851.8
ENST00000468638.1
ENST00000523221.1
CDS GCA 72 bp CCCGTCGCGATTTCCTGTGATGACGGGCAGCATGTCTaGGGAGGCGCTGGAAGTGGCCTGAGTGACTTTGAA +
Preference number: 6 (lower is better)
Translates to: PVAISCDDGQHV*GGAGSGLSDFE
Trigger: TTCAAAGTCACTCAGGCCACTTCCAGCGCCTCCGCAGACATGCTGCCCGTCATCACAGGAAATCGCGACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS GCA 72 bp GGGGCCATGCCATGCTCGTGTTGCAGGATCAGGCACTaGTCCAGTGTCACCGACATGGCTGTACGGTCCTTA +
Preference number: 6 (lower is better)
Translates to: GAMPCSCCRIRH*SSVTDMAVRSL
Trigger: TAAGGACCGTACAGCCATGTCGGTGACACTGGAGCAGTGCCTGATCCTGCAACACGAGCATGGCATGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000498026.1
ENST00000523221.1
CDS CCA 72 bp TTGACAGTGTCCACAGACCGGGTCACAGGGGGCCGTTaGTCTGACTTCTCCTCCATCTGCCAGCCAATCACG +
Preference number: 6 (lower is better)
Translates to: LTVSTDRVTGGR*SDFSSICQPIT
Trigger: CGTGATTGGCTGGCAGATGGAGGAGAAGTCAGACCAACGGCCCCCTGTGACCCGGTCTGTGGACACTGTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 72 bp TCCAGTAGGCGTGGCTGTCCGGGTTACCTTTCTTGCTaGTGCAGCTGCCTGCACAGGGGAAGACATCCTCAC +
Preference number: 6 (lower is better)
Translates to: SSRRGCPGYLSC*CSCLHRGRHPH
Trigger: GTGAGGATGTCTTCCCCTGTGCAGGCAGCTGCACCAGCAAGAAAGGTAACCCGGACAGCCACGCCTACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409851.8
ENST00000468638.1
ENST00000523221.1
CDS CCA 72 bp CTCAAGGCCATGTGGTTAGCCTGGCATGGTCAGGGCTaGAATCCAGGTCATCTGACTCCCCAGGAGGTGCCT +
Preference number: 6 (lower is better)
Translates to: LKAMWLAWHGQG*NPGHLTPQEVP
Trigger: AGGCACCTCCTGGGGAGTCAGATGACCTGGATTCCAGCCCTGACCATGCCAGGCTAACCACATGGCCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CCA 72 bp GAGTGGCAGGCTCAAGGCCATGTGGTTAGCCTGGCATaGTCAGGGCTGGAATCCAGGTCATCTGACTCCCCA +
Preference number: 6 (lower is better)
Translates to: EWQAQGHVVSLA*SGLESRSSDSP
Trigger: TGGGGAGTCAGATGACCTGGATTCCAGCCCTGACCATGCCAGGCTAACCACATGGCCTTGAGCCTGCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CAA 72 bp GTATCGCCAAACCTCTCGGCCAGTGTCTGCTGCTCATaGATGCCCACGTTGAAGAGGACGGGCTGCACTCGC +
Preference number: 6 (lower is better)
Translates to: VSPNLSASVCCS*MPTLKRTGCTR
Trigger: GCGAGTGCAGCCCGTCCTCTTCAACGTGGGCATCAATGAGCAGCAGACACTGGCCGAGAGGTTTGGCGATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000467042.1
ENST00000523221.1
CDS CAA 72 bp CCTGGCGTACACAGGTCCTGTGCTAATTACTTCACGTaGCTGCTGAGTGCTCCACACCACGCCGGTCAGGGG +
Preference number: 6 (lower is better)
Translates to: PGVHRSCANYFT*LLSAPHHAGQG
Trigger: CCCCTGACCGGCGTGGTGTGGAGCACTCAGCAGCAACGTGAAGTAATTAGCACAGGACCTGTGTACGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498026.1
CDS CAA 90 bp GTTCTCCTGGTATGTGAGGATGATGGTCTGGTACTGGGTGACAATTaGGCGCCGGAGGCTCTCCCAGCAAGGGGACAGCTCTCCCAGCTC +
Preference number: 6 (lower is better)
Translates to: VLLVCEDDGLVLGDN*APEALPARGQLSQL
Trigger: GAGCTGGGAGAGCTGTCCCCTTGCTGGGAGAGCCTCCGGCGCCAAATTGTCACCCAGTACCAGACCATCATCCTCACATACCAGGAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CAA 90 bp CGAGTGTCCTCTCAAGGCCAGTGGCAGACCTGTCCTTGGCTGCCCTaGACAGCCGCTCTGCGTAGTAACTCACTTGGGTTTTCAGGGTGT +
Preference number: 6 (lower is better)
Translates to: RVSSQGQWQTCPWLP*TAALRSNSLGFSGC
Trigger: ACACCCTGAAAACCCAAGTGAGTTACTACGCAGAGCGGCTGTCAAGGGCAGCCAAGGACAGGTCTGCCACTGGCCTTGAGAGGACACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS TCA 72 bp GATGATGTGCTTCTTGATCCTCGGTCAGACCACGCCTaGTTACCCGGGAAGTGCTGGCACCGAGCCCTAGTC +
Preference number: 6 (lower is better)
Translates to: DDVLLDPRSDHA*LPGKCWHRALV
Trigger: GACTAGGGCTCGGTGCCAGCACTTCCCGGGTAATCAGGCGTGGTCTGACCGAGGATCAAGAAGCACATCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000463367.1
CDS TCA 72 bp TCAGGTAGGTGGCTATGGTGGGCGCGCTGTCCTGCATaGGCAGGAATACCATGGCCTTCTTGGCCTTGTCAC +
Preference number: 6 (lower is better)
Translates to: SGRWLWWARCPA*AGIPWPSWPCH
Trigger: GTGACAAGGCCAAGAAGGCCATGGTATTCCTGCTCATGCAGGACAGCGCGCCCACCATAGCCACCTACCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS TCA 72 bp ACGGGCAGCATGTCTGCGGAGGCGCTGGAAGTGGCCTaGGTGACTTTGAAGGTCACGTTCCTCAAGTCCATG +
Preference number: 6 (lower is better)
Translates to: TGSMSAEALEVA*VTLKVTFLKSM
Trigger: CATGGACTTGAGGAACGTGACCTTCAAAGTCACTCAGGCCACTTCCAGCGCCTCCGCAGACATGCTGCCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS TCA 72 bp ATGGGAAGCATGGATGCATACGCACGTGTGGTCAGATaGGGATGGCATGCAGTGGAGGGCATGGTGGAGGGG +
Preference number: 6 (lower is better)
Translates to: MGSMDAYARVVR*GWHAVEGMVEG
Trigger: CCCCTCCACCATGCCCTCCACTGCATGCCATCCTCATCTGACCACACGTGCGTATGCATCCATGCTTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468638.1
CDS TCA 72 bp TACACAGGTCCTGTGCTAATTACTTCACGTTGCTGCTaGGTGCTCCACACCACGCCGGTCAGGGGACAGGGC +
Preference number: 6 (lower is better)
Translates to: YTGPVLITSRCC*VLHTTPVRGQG
Trigger: GCCCTGTCCCCTGACCGGCGTGGTGTGGAGCACTCAGCAGCAACGTGAAGTAATTAGCACAGGACCTGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498026.1
CDS GCA 72 bp TCCACGTTCAGCCACACTTTCTCCCACTCCTCCTCGTaGCAGTCCACCTGCAGGGAAGATCGGCTGTTTCTC +
Preference number: 6 (lower is better)
Translates to: STFSHTFSHSSS*QSTCREDRLFL
Trigger: GAGAAACAGCCGATCTTCCCTGCAGGTGGACTGGCACGAGGAGGAGTGGGAGAAAGTGTGGCTGAACGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000468638.1
ENST00000523221.1
CDS CCA 72 bp AAGTCTCGGATGGGCACCAGGCCGCTCAAGTTCTTCTaGGTGACTACCTCCCGTGTTCCAATGCTGCGCATG +
Preference number: 6 (lower is better)
Translates to: KSRMGTRPLKFF*VTTSRVPMLRM
Trigger: CATGCGCAGCATTGGAACACGGGAGGTAGTCACCCAGAAGAACTTGAGCGGCCTGGTGCCCATCCGAGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409540.7
CDS CCA 72 bp AGTGCTGTGCAGCTCTCGGTTCCTCCCTTAGTTCTGTaGCTGCAGAGCCCTAGCTGCAGCATCTTCACTGGC +
Preference number: 6 (lower is better)
Translates to: SAVQLSVPPLVL*LQSPSCSIFTG
Trigger: GCCAGTGAAGATGCTGCAGCTAGGGCTCTGCAGCCACAGAACTAAGGGAGGAACCGAGAGCTGCACAGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467042.1
CDS CCA 72 bp TTTTCCCACTGCTTCCCTGCTGAAGCCACGACTTCTTaGCCCAGCCCCGGAGTGTTCTGCATCACTCTCTCC +
Preference number: 6 (lower is better)
Translates to: FSHCFPAEATTS*PSPGVFCITLS
Trigger: GGAGAGAGTGATGCAGAACACTCCGGGGCTGGGCCAAGAAGTCGTGGCTTCAGCAGGGAAGCAGTGGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467042.1
CDS CAA 90 bp TGTAAAGACGTATCGCCAAACCTCTCGGCCAGTGTCTGCTGCTCATaGATGCCCACGTTGAAGAGGACGGGCTGCACTCGCAGCAGCATG +
Preference number: 6 (lower is better)
Translates to: CKDVSPNLSASVCCS*MPTLKRTGCTRSSM
Trigger: CATGCTGCTGCGAGTGCAGCCCGTCCTCTTCAACGTGGGCATCAATGAGCAGCAGACACTGGCCGAGAGGTTTGGCGATACGTCTTTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000467042.1
ENST00000523221.1
CDS TCA 72 bp CTCAAGGCCAGTGGCAGACCTGTCCTTGGCTGCCCTTaGCAGCCGCTCTGCGTAGTAACTCACTTGGGTTTT +
Preference number: 6 (lower is better)
Translates to: LKASGRPVLGCP*QPLCVVTHLGF
Trigger: AAAACCCAAGTGAGTTACTACGCAGAGCGGCTGTCAAGGGCAGCCAAGGACAGGTCTGCCACTGGCCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS TCA 72 bp GCCGCTCCTTCTGCAGCAGCTTGTCCACACGCTGAATaGTGCACTCTAGGCTCTTGTCCACGTTCAGCCACA +
Preference number: 6 (lower is better)
Translates to: AAPSAAACPHAE*CTLGSCPRSAT
Trigger: TGTGGCTGAACGTGGACAAGAGCCTAGAGTGCATCATTCAGCGTGTGGACAAGCTGCTGCAGAAGGAGCGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000468638.1
ENST00000523221.1
CDS TCA 72 bp TGCAGCCGCTCCTTCTGCAGCAGCTTGTCCACACGCTaGATGATGCACTCTAGGCTCTTGTCCACGTTCAGC +
Preference number: 6 (lower is better)
Translates to: CSRSFCSSLSTR*MMHSRLLSTFS
Trigger: GCTGAACGTGGACAAGAGCCTAGAGTGCATCATTCAGCGTGTGGACAAGCTGCTGCAGAAGGAGCGGCTGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000468638.1
ENST00000523221.1
CDS TCA 72 bp GTGAGGAGGGGACATCACAGAAGGGGTCTTCTGGTCTaGTCCAGTAGGCGTGGCTGTCCGGGTTACCTTTCT +
Preference number: 6 (lower is better)
Translates to: VRRGHHRRGLLV*SSRRGCPGYLS
Trigger: AGAAAGGTAACCCGGACAGCCACGCCTACTGGATCAGACCAGAAGACCCCTTCTGTGATGTCCCCTCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000074304.9
ENST00000409851.8
ENST00000468638.1
ENST00000523221.1
CDS TCA 72 bp ATGTCGACGTTCTTATTCTTCCGGGCATGCACGTTCTaGCCCAGAAACCGCAGCAGCTCTGGCAGGCACGTC +
Preference number: 6 (lower is better)
Translates to: MSTFLFFRACTF*PRNRSSSGRHV
Trigger: GACGTGCCTGCCAGAGCTGCTGCGGTTTCTGGGTCAGAACGTGCATGCCCGGAAGAATAAGAACGTCGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000498026.1
ENST00000523221.1
CDS TCA 72 bp CCCCACTCCCCAACACAGGGTGTCCATGGGATCCCTTaGGGATGTCCTGTCCTCTTCAGCAGAGATATGCCA +
Preference number: 6 (lower is better)
Translates to: PHSPTQGVHGIP*GCPVLFSRDMP
Trigger: TGGCATATCTCTGCTGAAGAGGACAGGACATCCTCAAGGGATCCCATGGACACCCTGTGTTGGGGAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS GCA 72 bp GTCACAGGGGGCCGTTGGTCTGACTTCTCCTCCATCTaGCAGCCAATCACGGTGATGTTACCTACACGGTCA +
Preference number: 6 (lower is better)
Translates to: VTGGRWSDFSSI*QPITVMLPTRS
Trigger: TGACCGTGTAGGTAACATCACCGTGATTGGCTGGCAGATGGAGGAGAAGTCAGACCAACGGCCCCCTGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS GCA 72 bp AAAGACGTATCGCCAAACCTCTCGGCCAGTGTCTGCTaGTCATTGATGCCCACGTTGAAGAGGACGGGCTGC +
Preference number: 6 (lower is better)
Translates to: KDVSPNLSASVC*SLMPTLKRTGC
Trigger: GCAGCCCGTCCTCTTCAACGTGGGCATCAATGAGCAGCAGACACTGGCCGAGAGGTTTGGCGATACGTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000467042.1
ENST00000523221.1
CDS CCA 72 bp TCGGTCAGGTTCTCCTGGTATGTGAGGATGATGGTCTaGTACTGGGTGACAATTTGGCGCCGGAGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: SVRFSWYVRMMV*YWVTIWRRRLS
Trigger: GGAGAGCCTCCGGCGCCAAATTGTCACCCAGTACCAGACCATCATCCTCACATACCAGGAGAACCTGACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 72 bp GGCTCAGAGCTAATAAAGGGATGGAACAGAGGAGGCTaGGGTCTAGCCTTAAGTCTCGGATGGGCACCAGGC +
Preference number: 6 (lower is better)
Translates to: GSELIKGWNRGG*GLALSLGWAPG
Trigger: GCCTGGTGCCCATCCGAGACTTAAGGCTAGACCCCAGCCTCCTCTGTTCCATCCCTTTATTAGCTCTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409540.7
CDS CCA 72 bp GGCAGCATATGGGAAGCATGGATGCATACGCACGTGTaGTCAGATGAGGATGGCATGCAGTGGAGGGCATGG +
Preference number: 6 (lower is better)
Translates to: GSIWEAWMHTHV*SDEDGMQWRAW
Trigger: CCATGCCCTCCACTGCATGCCATCCTCATCTGACCACACGTGCGTATGCATCCATGCTTCCCATATGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468638.1
CDS TCA 72 bp CCAAGGTGCCTTCCCATCCACAGAAGTTCACAACTGTaGGGGCTCCGTCTTCTCAGAAACGCTGCAGCAGTG +
Preference number: 6 (lower is better)
Translates to: PRCLPIHRSSQL*GLRLLRNAAAV
Trigger: CACTGCTGCAGCGTTTCTGAGAAGACGGAGCCCTCACAGTTGTGAACTTCTGTGGATGGGAAGGCACCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS GCA 72 bp TGTAAAGACGTATCGCCAAACCTCTCGGCCAGTGTCTaGTGCTCATTGATGCCCACGTTGAAGAGGACGGGC +
Preference number: 6 (lower is better)
Translates to: CKDVSPNLSASV*CSLMPTLKRTG
Trigger: GCCCGTCCTCTTCAACGTGGGCATCAATGAGCAGCAGACACTGGCCGAGAGGTTTGGCGATACGTCTTTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000467042.1
ENST00000523221.1
CDS GCA 72 bp CTGTGCTATGGAAAGGGAGGGCTCTGGGTAAAACACTaGCACAGGCTGAGTCACACGCTTCACATGGCTCAG +
Preference number: 6 (lower is better)
Translates to: LCYGKGGLWVKH*HRLSHTLHMAQ
Trigger: CTGAGCCATGTGAAGCGTGTGACTCAGCCTGTGGCAGTGTTTTACCCAGAGCCCTCCCTTTCCATAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CCA 72 bp CTGCTCCAGGATCCGCAAATGGTTACCATCAGTGGTTaGAAACCGGTACATGCGGCAGATGGCACCACCGAA +
Preference number: 6 (lower is better)
Translates to: LLQDPQMVTISG*KPVHAADGTTE
Trigger: TTCGGTGGTGCCATCTGCCGCATGTACCGGTTTCCAACCACTGATGGTAACCATTTGCGGATCCTGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 72 bp CCATCTGCTCCAGGATCCGCAAATGGTTACCATCAGTaGTTGGAAACCGGTACATGCGGCAGATGGCACCAC +
Preference number: 6 (lower is better)
Translates to: PSAPGSANGYHQ*LETGTCGRWHH
Trigger: GTGGTGCCATCTGCCGCATGTACCGGTTTCCAACCACTGATGGTAACCATTTGCGGATCCTGGAGCAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 72 bp AGCACGCTCTCTGCCATCTGCTCCAGGATCCGCAAATaGTTACCATCAGTGGTTGGAAACCGGTACATGCGG +
Preference number: 6 (lower is better)
Translates to: STLSAICSRIRK*LPSVVGNRYMR
Trigger: CCGCATGTACCGGTTTCCAACCACTGATGGTAACCATTTGCGGATCCTGGAGCAGATGGCAGAGAGCGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 72 bp AGGTTCTCCTGGTATGTGAGGATGATGGTCTGGTACTaGGTGACAATTTGGCGCCGGAGGCTCTCCCAGCAA +
Preference number: 6 (lower is better)
Translates to: RFSWYVRMMVWY*VTIWRRRLSQQ
Trigger: TTGCTGGGAGAGCCTCCGGCGCCAAATTGTCACCCAGTACCAGACCATCATCCTCACATACCAGGAGAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 72 bp AAGTGGAGGGTGCTGTGCTATGGAAAGGGAGGGCTCTaGGTAAAACACTGCCACAGGCTGAGTCACACGCTT +
Preference number: 6 (lower is better)
Translates to: KWRVLCYGKGGL*VKHCHRLSHTL
Trigger: AAGCGTGTGACTCAGCCTGTGGCAGTGTTTTACCCAGAGCCCTCCCTTTCCATAGCACAGCACCCTCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CCA 72 bp AATCTGGGCCTAAGCGAAGTGGAGGGTGCTGTGCTATaGAAAGGGAGGGCTCTGGGTAAAACACTGCCACAG +
Preference number: 6 (lower is better)
Translates to: NLGLSEVEGAVL*KGRALGKTLPQ
Trigger: CTGTGGCAGTGTTTTACCCAGAGCCCTCCCTTTCCATAGCACAGCACCCTCCACTTCGCTTAGGCCCAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CCA 72 bp TTGGTGCCAGGCCACCAACTAATGTTGACCAAGGAATaGGAAAAGGGGAGAGGAGCGCTGGGTAGCATTGGG +
Preference number: 6 (lower is better)
Translates to: LVPGHQLMLTKE*EKGRGALGSIG
Trigger: CCCAATGCTACCCAGCGCTCCTCTCCCCTTTTCCCATTCCTTGGTCAACATTAGTTGGTGGCCTGGCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CAA 72 bp TCTGCTCCAGGATCCGCAAATGGTTACCATCAGTGGTaGGAAACCGGTACATGCGGCAGATGGCACCACCGA +
Preference number: 6 (lower is better)
Translates to: SAPGSANGYHQW*ETGTCGRWHHR
Trigger: TCGGTGGTGCCATCTGCCGCATGTACCGGTTTCCAACCACTGATGGTAACCATTTGCGGATCCTGGAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CAA 72 bp TCCTGCATGAGCAGGAATACCATGGCCTTCTTGGCCTaGTCACTCATCATGGCCACGCAGTCGGTGAGAGTG +
Preference number: 6 (lower is better)
Translates to: SCMSRNTMAFLA*SLIMATQSVRV
Trigger: CACTCTCACCGACTGCGTGGCCATGATGAGTGACAAGGCCAAGAAGGCCATGGTATTCCTGCTCATGCAGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CAA 90 bp TCTCTGCCATCTGCTCCAGGATCCGCAAATGGTTACCATCAGTGGTaGGAAACCGGTACATGCGGCAGATGGCACCACCGAACACCGATT +
Preference number: 6 (lower is better)
Translates to: SLPSAPGSANGYHQW*ETGTCGRWHHRTPI
Trigger: AATCGGTGTTCGGTGGTGCCATCTGCCGCATGTACCGGTTTCCAACCACTGATGGTAACCATTTGCGGATCCTGGAGCAGATGGCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS GCA 72 bp CTCAATGATCTCCGTCTGTGCATGCTTCGTCCAGAATaGCTGAGGAGGGGTGGTGACACTCACCGCAACAAA +
Preference number: 6 (lower is better)
Translates to: LNDLRLCMLRPE*LRRGGDTHRNK
Trigger: TTTGTTGCGGTGAGTGTCACCACCCCTCCTCAGGCATTCTGGACGAAGCATGCACAGACGGAGATCATTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CCA 72 bp CCCCAGGAGGTGCCTCTTTTATGTCACACCACCTCTTaGACATTGGTGCCAGGCCACCAACTAATGTTGACC +
Preference number: 6 (lower is better)
Translates to: PQEVPLLCHTTS*TLVPGHQLMLT
Trigger: GGTCAACATTAGTTGGTGGCCTGGCACCAATGTCCAAGAGGTGGTGTGACATAAAAGAGGCACCTCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CCA 72 bp GCTTCAGAGCCAGGCACCCCTTTCTTCATCTGGACATaGATCCTATCACCGACCCATAGGGCTGTTGTGGAT +
Preference number: 6 (lower is better)
Translates to: ASEPGTPFFIWT*ILSPTHRAVVD
Trigger: ATCCACAACAGCCCTATGGGTCGGTGATAGGATCCATGTCCAGATGAAGAAAGGGGTGCCTGGCTCTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467042.1
CDS CCA 72 bp ACATGGGCTTCAGAGCCAGGCACCCCTTTCTTCATCTaGACATGGATCCTATCACCGACCCATAGGGCTGTT +
Preference number: 6 (lower is better)
Translates to: TWASEPGTPFFI*TWILSPTHRAV
Trigger: AACAGCCCTATGGGTCGGTGATAGGATCCATGTCCAGATGAAGAAAGGGGTGCCTGGCTCTGAAGCCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467042.1
CDS CAA 90 bp CTGTGCTCTCTTGCTGTCATGATGTCATTGGTGATGATGTGCTTCTaGATCCTCGGTCAGACCACGCCTGATTACCCGGGAAGTGCTGGC +
Preference number: 6 (lower is better)
Translates to: LCSLAVMMSLVMMCF*ILGQTTPDYPGSAG
Trigger: GCCAGCACTTCCCGGGTAATCAGGCGTGGTCTGACCGAGGATCAAGAAGCACATCATCACCAATGACATCATGACAGCAAGAGAGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000463367.1
CDS CAA 90 bp TGTCACACCACCTCTTGGACATTGGTGCCAGGCCACCAACTAATGTaGACCAAGGAATGGGAAAAGGGGAGAGGAGCGCTGGGTAGCATT +
Preference number: 6 (lower is better)
Translates to: CHTTSWTLVPGHQLM*TKEWEKGRGALGSI
Trigger: AATGCTACCCAGCGCTCCTCTCCCCTTTTCCCATTCCTTGGTCAACATTAGTTGGTGGCCTGGCACCAATGTCCAAGAGGTGGTGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS TCA 72 bp ATGATCTCCGTCTGTGCATGCTTCGTCCAGAATGCCTaGGGAGGGGTGGTGACACTCACCGCAACAAAACTA +
Preference number: 6 (lower is better)
Translates to: MISVCACFVQNA*GGVVTLTATKL
Trigger: TAGTTTTGTTGCGGTGAGTGTCACCACCCCTCCTCAGGCATTCTGGACGAAGCATGCACAGACGGAGATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS TCA 72 bp GGTCTGACTTCTCCTCCATCTGCCAGCCAATCACGGTaGTGTTACCTACACGGTCACTCTCTGCAGACCTTA +
Preference number: 6 (lower is better)
Translates to: GLTSPPSASQSR*CYLHGHSLQTL
Trigger: TAAGGTCTGCAGAGAGTGACCGTGTAGGTAACATCACCGTGATTGGCTGGCAGATGGAGGAGAAGTCAGACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS TCA 72 bp CTCTTCAAATTTGTGCAGCTTTTTGCGGAGACCTCCTaGCTTAAAACCTTGGCAGTGTGCTGCTGGCGCCCC +
Preference number: 6 (lower is better)
Translates to: LFKFVQLFAETS*LKTLAVCCWRP
Trigger: GGGGCGCCAGCAGCACACTGCCAAGGTTTTAAGTCAGGAGGTCTCCGCAAAAAGCTGCACAAATTTGAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS TCA 72 bp GGCCTCCTGGGTAAGCACAGTGATGCCACGTATCGCTaGCCCCAGACTCAGCACATTCTGATCCACTTTTTA +
Preference number: 6 (lower is better)
Translates to: GLLGKHSDATYR*PQTQHILIHFL
Trigger: TAAAAAGTGGATCAGAATGTGCTGAGTCTGGGGTCAGCGATACGTGGCATCACTGTGCTTACCCAGGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS GCA 72 bp CAAGGTGAAATGGAGGCAGCATATGGGAAGCATGGATaGATACGCACGTGTGGTCAGATGAGGATGGCATGC +
Preference number: 6 (lower is better)
Translates to: QGEMEAAYGKHG*IRTCGQMRMAC
Trigger: GCATGCCATCCTCATCTGACCACACGTGCGTATGCATCCATGCTTCCCATATGCTGCCTCCATTTCACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468638.1
CDS CCA 72 bp TACCATCAGTGGTTGGAAACCGGTACATGCGGCAGATaGCACCACCGAACACCGATTTCAGCAAAGTGTCCT +
Preference number: 6 (lower is better)
Translates to: YHQWLETGTCGR*HHRTPISAKCP
Trigger: AGGACACTTTGCTGAAATCGGTGTTCGGTGGTGCCATCTGCCGCATGTACCGGTTTCCAACCACTGATGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CAA 72 bp TCCCCAGGAGGTGCCTCTTTTATGTCACACCACCTCTaGGACATTGGTGCCAGGCCACCAACTAATGTTGAC +
Preference number: 6 (lower is better)
Translates to: SPGGASFMSHHL*DIGARPPTNVD
Trigger: GTCAACATTAGTTGGTGGCCTGGCACCAATGTCCAAGAGGTGGTGTGACATAAAAGAGGCACCTCCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CAA 90 bp TCATCTGACTCCCCAGGAGGTGCCTCTTTTATGTCACACCACCTCTaGGACATTGGTGCCAGGCCACCAACTAATGTTGACCAAGGAATG +
Preference number: 6 (lower is better)
Translates to: SSDSPGGASFMSHHL*DIGARPPTNVDQGM
Trigger: CATTCCTTGGTCAACATTAGTTGGTGGCCTGGCACCAATGTCCAAGAGGTGGTGTGACATAAAAGAGGCACCTCCTGGGGAGTCAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS GCA 72 bp TATAGGATTGTTGGTTCCCTCAATGATCTCCGTCTGTaGATGCTTCGTCCAGAATGCCTGAGGAGGGGTGGT +
Preference number: 6 (lower is better)
Translates to: YRIVGSLNDLRL*MLRPECLRRGG
Trigger: ACCACCCCTCCTCAGGCATTCTGGACGAAGCATGCACAGACGGAGATCATTGAGGGAACCAACAATCCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS GCA 72 bp ACTGGGTTGAACTCAAGAGGGAATTCTCGTAGACAGTaGTGTGCAGCTCTCGGTTCCTCCCTTAGTTCTGTG +
Preference number: 6 (lower is better)
Translates to: TGLNSRGNSRRQ*CAALGSSLSSV
Trigger: CACAGAACTAAGGGAGGAACCGAGAGCTGCACAGCACTGTCTACGAGAATTCCCTCTTGAGTTCAACCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467042.1
CDS CAA 90 bp CCGAACACCGATTTCAGCAAAGTGTCCTTTCGCAATGAAGCGTATTaGGATCGGATTCCTAACGCCTCCGTCAAGCTCTCATCGACAGGA +
Preference number: 6 (lower is better)
Translates to: PNTDFSKVSFRNEAY*DRIPNASVKLSSTG
Trigger: TCCTGTCGATGAGAGCTTGACGGAGGCGTTAGGAATCCGATCCAAATACGCTTCATTGCGAAAGGACACTTTGCTGAAATCGGTGTTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CAA 90 bp GTCACCAGGTATGCTATGCTCAGAAAGAGCCACACAATCAGTAAATaGGGGCTCAGAGCTAATAAAGGGATGGAACAGAGGAGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: VTRYAMLRKSHTISK*GLRANKGMEQRRLG
Trigger: CCCCAGCCTCCTCTGTTCCATCCCTTTATTAGCTCTGAGCCCCAATTTACTGATTGTGTGGCTCTTTCTGAGCATAGCATACCTGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409540.7
CDS TCA 72 bp GCAGGTGCCAATGTTGCCTTTTATACAATAGGGAACTaGGGGCTAGAGAGCGAAACTCAGCCAACACAAGGC +
Preference number: 6 (lower is better)
Translates to: AGANVAFYTIGN*GLESETQPTQG
Trigger: GCCTTGTGTTGGCTGAGTTTCGCTCTCTAGCCCTCAGTTCCCTATTGTATAAAAGGCAACATTGGCACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CCA 72 bp CACCAAACACATCTTGTGTCAGTGACTACGACAGCATaGGAAGGAGCCATGTCACATAGGAATCCTCAGGCA +
Preference number: 6 (lower is better)
Translates to: HQTHLVSVTTTA*EGAMSHRNPQA
Trigger: TGCCTGAGGATTCCTATGTGACATGGCTCCTTCCCATGCTGTCGTAGTCACTGACACAAGATGTGTTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467042.1
CDS CAA 72 bp GAGGTGCCTCTTTTATGTCACACCACCTCTTGGACATaGGTGCCAGGCCACCAACTAATGTTGACCAAGGAA +
Preference number: 6 (lower is better)
Translates to: EVPLLCHTTSWT*VPGHQLMLTKE
Trigger: TTCCTTGGTCAACATTAGTTGGTGGCCTGGCACCAATGTCCAAGAGGTGGTGTGACATAAAAGAGGCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS TCA 72 bp TGCACAATGCATGCCACCAAACACATCTTGTGTCAGTaGCTACGACAGCATGGGAAGGAGCCATGTCACATA +
Preference number: 6 (lower is better)
Translates to: CTMHATKHILCQ*LRQHGKEPCHI
Trigger: TATGTGACATGGCTCCTTCCCATGCTGTCGTAGTCACTGACACAAGATGTGTTTGGTGGCATGCATTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467042.1
CDS CAA 90 bp CCAGATGATGTATGTTTCTTGGTCTCTTCAAATTTGTGCAGCTTTTaGCGGAGACCTCCTGACTTAAAACCTTGGCAGTGTGCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: PDDVCFLVSSNLCSF*RRPPDLKPWQCAAG
Trigger: GCCAGCAGCACACTGCCAAGGTTTTAAGTCAGGAGGTCTCCGCAAAAAGCTGCACAAATTTGAAGAGACCAAGAAACATACATCATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409851.8
CDS GCA 72 bp CTGATCCTGAGAAAGAGAGCATGCAGGTGCCAATGTTaGCTTTTATACAATAGGGAACTGAGGGCTAGAGAG +
Preference number: 6 (lower is better)
Translates to: LILRKRACRCQC*LLYNRELRARE
Trigger: CTCTCTAGCCCTCAGTTCCCTATTGTATAAAAGGCAACATTGGCACCTGCATGCTCTCTTTCTCAGGATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CAA 72 bp GATTTCAGCAAAGTGTCCTTTCGCAATGAAGCGTATTaGGATCGGATTCCTAACGCCTCCGTCAAGCTCTCA +
Preference number: 6 (lower is better)
Translates to: DFSKVSFRNEAY*DRIPNASVKLS
Trigger: TGAGAGCTTGACGGAGGCGTTAGGAATCCGATCCAAATACGCTTCATTGCGAAAGGACACTTTGCTGAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CAA 90 bp ATGGACTGGCAGCCAGATGATGTATGTTTCTTGGTCTCTTCAAATTaGTGCAGCTTTTTGCGGAGACCTCCTGACTTAAAACCTTGGCAG +
Preference number: 6 (lower is better)
Translates to: MDWQPDDVCFLVSSN*CSFLRRPPDLKPWQ
Trigger: CTGCCAAGGTTTTAAGTCAGGAGGTCTCCGCAAAAAGCTGCACAAATTTGAAGAGACCAAGAAACATACATCATCTGGCTGCCAGTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409851.8
CDS CCA 72 bp ATTTCAGCAAAGTGTCCTTTCGCAATGAAGCGTATTTaGATCGGATTCCTAACGCCTCCGTCAAGCTCTCAT +
Preference number: 6 (lower is better)
Translates to: ISAKCPFAMKRI*IGFLTPPSSSH
Trigger: ATGAGAGCTTGACGGAGGCGTTAGGAATCCGATCCAAATACGCTTCATTGCGAAAGGACACTTTGCTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS TCA 72 bp TCACTCTCTGCAGACCTTAGTGTTAAATGCAACCTATaGTGCCTGTCCTGGAGCAGATCTTTGACAATGAAC +
Preference number: 6 (lower is better)
Translates to: SLSADLSVKCNL*CLSWSRSLTMN
Trigger: GTTCATTGTCAAAGATCTGCTCCAGGACAGGCATCATAGGTTGCATTTAACACTAAGGTCTGCAGAGAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS GCA 72 bp TTCATTTGCAACGCAATTTGGTCACCAGGTATGCTATaGTCAGAAAGAGCCACACAATCAGTAAATTGGGGC +
Preference number: 6 (lower is better)
Translates to: FICNAIWSPGML*SERATQSVNWG
Trigger: GCCCCAATTTACTGATTGTGTGGCTCTTTCTGAGCATAGCATACCTGGTGACCAAATTGCGTTGCAAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409540.7
CDS CAA 72 bp GTATGTTTCTTGGTCTCTTCAAATTTGTGCAGCTTTTaGCGGAGACCTCCTGACTTAAAACCTTGGCAGTGT +
Preference number: 6 (lower is better)
Translates to: VCFLVSSNLCSF*RRPPDLKPWQC
Trigger: ACACTGCCAAGGTTTTAAGTCAGGAGGTCTCCGCAAAAAGCTGCACAAATTTGAAGAGACCAAGAAACATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409851.8
CDS GCA 72 bp ATGCTTGGGGAAAGCCTTCAGCTGCAGGGAATTAAATaGATATTTGCGACTTCCAACATTCTTCATTGTATT +
Preference number: 6 (lower is better)
Translates to: MLGESLQLQGIK*IFATSNILHCI
Trigger: AATACAATGAAGAATGTTGGAAGTCGCAAATATGCATTTAATTCCCTGCAGCTGAAGGCTTTCCCCAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409851.8
ENST00000498026.1
ENST00000523221.1
CDS CAA 90 bp TGTTCCCTGAGATCTATCTTTGACATCATACACGGAGAGTTTGACTaGTGTCATCTGATTGATAAGAGAGTCTTGAAAGAAGGCAATACT +
Preference number: 6 (lower is better)
Translates to: CSLRSIFDIIHGEFD*CHLIDKRVLKEGNT
Trigger: AGTATTGCCTTCTTTCAAGACTCTCTTATCAATCAGATGACACAAGTCAAACTCTCCGTGTATGATGTCAAAGATAGATCTCAGGGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS CAA 90 bp CTGATCCTCCATCGTCTTGAACTCTCATCCTTTGTATGTGCAAGTTaGTGGGAACAAATTCTAACTTTTTATCTGCTTTCAAACTGCTTG +
Preference number: 6 (lower is better)
Translates to: LILHRLELSSFVCAS*WEQILTFYLLSNCL
Trigger: CAAGCAGTTTGAAAGCAGATAAAAAGTTAGAATTTGTTCCCACAAACTTGCACATACAAAGGATGAGAGTTCAAGACGATGGAGGATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS GCA 72 bp ACAAAACTATTTGGCTTTCGATCTAGCGATGGAGTATaGAGCTCACTGCAAGCTAAGCTAAATTCTAAAATG +
Preference number: 6 (lower is better)
Translates to: TKLFGFRSSDGV*SSLQAKLNSKM
Trigger: CATTTTAGAATTTAGCTTAGCTTGCAGTGAGCTGCATACTCCATCGCTAGATCGAAAGCCAAATAGTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409463.5
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1
CDS GCA 72 bp TTAGTATATTCTTATCTGATCCTGAGAAAGAGAGCATaGAGGTGCCAATGTTGCCTTTTATACAATAGGGAA +
Preference number: 6 (lower is better)
Translates to: LVYSYLILRKRA*RCQCCLLYNRE
Trigger: TTCCCTATTGTATAAAAGGCAACATTGGCACCTGCATGCTCTCTTTCTCAGGATCAGATAAGAATATACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463367.1
CDS CAA 90 bp TGTGACTTATTAATTTTTCATAATGATATTCATTTGCAACGCAATTaGGTCACCAGGTATGCTATGCTCAGAAAGAGCCACACAATCAGT +
Preference number: 6 (lower is better)
Translates to: CDLLIFHNDIHLQRN*VTRYAMLRKSHTIS
Trigger: ACTGATTGTGTGGCTCTTTCTGAGCATAGCATACCTGGTGACCAAATTGCGTTGCAAATGAATATCATTATGAAAAATTAATAAGTCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409540.7
CDS CAA 72 bp AGATCTATCTTTGACATCATACACGGAGAGTTTGACTaGTGTCATCTGATTGATAAGAGAGTCTTGAAAGAA +
Preference number: 6 (lower is better)
Translates to: RSIFDIIHGEFD*CHLIDKRVLKE
Trigger: TTCTTTCAAGACTCTCTTATCAATCAGATGACACAAGTCAAACTCTCCGTGTATGATGTCAAAGATAGATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000074304.9
ENST00000409016.8
ENST00000409540.7
ENST00000409851.8
ENST00000523221.1