RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IMPG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000112706

Ensembl transcript IDs: ENST00000369950.8, ENST00000369952.3, ENST00000369963.5, ENST00000611179.4

Found 308 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTGATTTTGATGACCCATaGATATGCCTGTCTCCATTT +
Preference number: 2 (lower is better)
Translates to: TLHTFMRLERPASPCVSSDFDDP*ICLSPF
Trigger: AAATGGAGACAGGCATATTCATGGGTCATCAAAATC...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
3UTR-3UTR TCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCGATTTTGATGACCCATaGATATGCCTGTCTCCATTT +
Preference number: 2 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSDFDDP*ICLSPF
Trigger: AAATGGAGACAGGCATATTCATGGGTCATCAAAATC...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
3UTR-3UTR CCA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCAGGTGGAAGCAAACCTaGCTTATGATCATTTTGACT +
Preference number: 2 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETRWKQT*LMIILT
Trigger: AGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCT...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
3UTR-3UTR CCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATAATTTTCAGGGAAGGTaGAAGCAAACCTGGCTTATG +
Preference number: 2 (lower is better)
Translates to: FMRLERPASPCVSSHLLNNFQGR*KQTWLM
Trigger: CATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
3UTR-3UTR TCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCTGTCTCCATTTTCCTTaGGAAGGCAAATCATCTCTC +
Preference number: 2 (lower is better)
Translates to: NFQGRWKQTWLMIILTIICLHFP*EGKSSL
Trigger: GAGAGATGATTTGCCTTCTCAAGGAAAATGGAGACA...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
3UTR-3UTR TCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATAAATATGGTGTGTGCTaGTTCTCAGTGTTGACTGTA +
Preference number: 2 (lower is better)
Translates to: FMRLERPASPCVSSHLLNKYGVC*FSVLTV
Trigger: TACAGTCAACACTGAGAATCAGCACACACCATATTT...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
3UTR-3UTR TCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTTGTCTCCATTTTCCTTaGGAAGGCAAATCATCTCTC +
Preference number: 2 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLICLHFP*EGKSSL
Trigger: GAGAGATGATTTGCCTTCTCAAGGAAAATGGAGACA...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
3UTR-3UTR TCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCGATTTTGATGACCCATaGATATGCCTGTCTCCATTT +
Preference number: 2 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIDFDDP*ICLSPF
Trigger: AAATGGAGACAGGCATATTCATGGGTCATCAAAATC...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
3UTR-3UTR TCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCAAATATGGTGTGTGCTaGTTCTCAGTGTTGACTGTA +
Preference number: 2 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIKYGVC*FSVLTV
Trigger: TACAGTCAACACTGAGAATCAGCACACACCATATTT...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
3UTR-3UTR TCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTTGCAAATGATCTGTaGGTAAAATTTTCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: FMRLERPASPCVSSHLLNVANDL*VKFSGK
Trigger: CTTCCCTGAAAATTTTACTCACAGATCATTTGCAAC...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
3UTR-3UTR GCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATTCAGAATTTACTGGTTaGCAAGTACATGACTCTTCT +
Preference number: 2 (lower is better)
Translates to: FMRLERPASPCVSSHLLNSEFTG*QVHDSS
Trigger: AGAAGAGTCATGTACTTGGCAACCAGTAAATTCTGA...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
3UTR-3UTR TCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAAGCTGATTCTCAGTGTTaGCTGTATGTCTGGATTTTG +
Preference number: 2 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKADSQC*LYVWIL
Trigger: CAAAATCCAGACATACAGTCAACACTGAGAATCAGC...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
3UTR-3UTR GCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCTCAGAATTTACTGGTTaGCAAGTACATGACTCTTCT +
Preference number: 2 (lower is better)
Translates to: NFQGRWKQTWLMIILTIISEFTG*QVHDSS
Trigger: AGAAGAGTCATGTACTTGGCAACCAGTAAATTCTGA...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
3UTR-3UTR CCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAAAATTTTCAGGGAAGGTaGAAGCAAACCTGGCTTATG +
Preference number: 2 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKNFQGR*KQTWLM
Trigger: CATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
3UTR-3UTR CCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAAAGGTGGAAGCAAACCTaGCTTATGATCATTTTGACT +
Preference number: 2 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKRWKQT*LMIILT
Trigger: AGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCT...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
3UTR-3UTR TCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAAAGTGTGCCTAATAACTaGATACTGAGGTTTGTGTTT +
Preference number: 2 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKSVPNN*ILRFVF
Trigger: AAACACAAACCTCAGTATTCAGTTATTAGGCACACT...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
3UTR-3UTR GCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAATCAGAATTTACTGGTTaGCAAGTACATGACTCTTCT +
Preference number: 2 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKSEFTG*QVHDSS
Trigger: AGAAGAGTCATGTACTTGGCAACCAGTAAATTCTGA...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
3UTR-3UTR CCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAAAGTAAGATTTTTCCATaGTATGTGTATCTGAACCTC +
Preference number: 2 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKSKIFP*YVYLNL
Trigger: GAGGTTCAGATACACATACCATGGAAAAATCTTACT...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
3UTR-3UTR CAA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCTGTATGTCTGGATTTaGATGACCCATGAATATGCC +
Preference number: 3 (lower is better)
Translates to: TLHTFMRLERPASPCVSSLYVWI*MTHEYA
Trigger: GGCATATTCATGGGTCATCAAAATCCAGACATACAG...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
3UTR-3UTR CAA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCCTGTCTCCATTTTCCTaGAGAAGGCAAATCATCTCT +
Preference number: 3 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSLSPFS*RRQIIS
Trigger: AGAGATGATTTGCCTTCTCAAGGAAAATGGAGACAG...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
3UTR-3UTR CAA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCCTGTCTCCATTTTCCTaGAGAAGGCAAATCATCTCT +
Preference number: 3 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETLSPFS*RRQIIS
Trigger: AGAGATGATTTGCCTTCTCAAGGAAAATGGAGACAG...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
3UTR-3UTR CAA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTCTGTCTCCATTTTCCTaGAGAAGGCAAATCATCTCT +
Preference number: 3 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLILSPFS*RRQIIS
Trigger: AGAGATGATTTGCCTTCTCAAGGAAAATGGAGACAG...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
3UTR-3UTR CAA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTCTGTATGTCTGGATTTaGATGACCCATGAATATGCC +
Preference number: 3 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLILYVWI*MTHEYA
Trigger: GGCATATTCATGGGTCATCAAAATCCAGACATACAG...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
3UTR CCA 72 bp GGTTGCCAAGTACATGACTCTTCTATATTTGAAATATaGTGTGTGCTGATTCTCAGTGTTGACTGTATGTCT +
Preference number: 3 (lower is better)
Translates to: GCQVHDSSIFEI*CVLILSVDCMS
Trigger: AGACATACAGTCAACACTGAGAATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
3UTR TCA 72 bp TACATGACTCTTCTATATTTGAAATATGGTGTGTGCTaGTTCTCAGTGTTGACTGTATGTCTGGATTTTGAT +
Preference number: 3 (lower is better)
Translates to: YMTLLYLKYGVC*FSVLTVCLDFD
Trigger: ATCAAAATCCAGACATACAGTCAACACTGAGAATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR TCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCCTGCTGGCAGATGCTaGCCCAGTCCTGATATTCCC +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSPAGRC*PSPDIP
Trigger: GGGAATATCAGGACTGGGTCAGCATCTGCCAGCAGG...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTCTGGGCTGGCTGGGCTaGGGTCCCGTTGGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLILGWLG*GPVGSL
Trigger: GAGAGACCCAACGGGACCTCAGCCCAGCCAGCCCAG...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369952.3
CDS-3UTR TCA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCTTACCAGAGAGACGCTaGGCTCCACCCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETLPERR*APPSAP
Trigger: AGGAGCAGAGGGTGGAGCTCAGCGTCTCTCTGGTAA...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCCACTGGTGGGGATGGTaGGCCCTGGTACTAGCATTG +
Preference number: 4 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETHWWGW*ALVLAL
Trigger: CAATGCTAGTACCAGGGCTCACCATCCCCACCAGTG...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTGTGTCAGGTAGACCATaGTCTGCTCCGTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSVSGRP*SAPSTV
Trigger: GACAGTGGACGGAGCAGAGCATGGTCTACCTGACAC...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCGCAGGCCAGGAACTTaGAGGGATCTGCTTGATCAG +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSRRPGT*RDLLDQ
Trigger: CTGATCAAGCAGATCCCTGCAAGTTCCTGGCCTGCG...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCCCGTCCAGGCTCCCCTaGCTGTCATATCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSPSRLP*LSYPGL
Trigger: CAAACCAGGATATGACAGCCAGGGGAGCCTGGACGG...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATCCTGCTGGCAGATGCTaGCCCAGTCCTGATATTCCC +
Preference number: 4 (lower is better)
Translates to: FMRLERPASPCVSSHLLNPAGRC*PSPDIP
Trigger: GGGAATATCAGGACTGGGTCAGCATCTGCCAGCAGG...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTAGGGAAAGGCCCAAGTaGGACGTTGGCAACATCTGT +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSRERPK*DVGNIC
Trigger: ACAGATGTTGCCAACGTCTCACTTGGGCCTTTCCCT...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATTTACCAGAGAGACGCTaGGCTCCACCCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: FMRLERPASPCVSSHLLNLPERR*APPSAP
Trigger: AGGAGCAGAGGGTGGAGCTCAGCGTCTCTCTGGTAA...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCCTGAGCTCCACCCTCTaGTCCTCCAACACAGCGAAT +
Preference number: 4 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETLSSTL*SSNTAN
Trigger: ATTCGCTGTGTTGGAGGAGCAGAGGGTGGAGCTCAG...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCGTGTCAGGTAGACCATaGTCTGCTCCGTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSVSGRP*SAPSTV
Trigger: GACAGTGGACGGAGCAGAGCATGGTCTACCTGACAC...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCTCCTCCAAGACCCCGTaGACAGCCTTGGTGAGGTTA +
Preference number: 4 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETSSKTP*TALVRL
Trigger: TAACCTCACCAAGGCTGTGCACGGGGTCTTGGAGGA...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCCCTCGCATTCCTTTGTaGCAGGGCCACAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIPRIPL*QGHRGL
Trigger: CAGGCCTCTGTGGCCCTGGCACAAAGGAATGCGAGG...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR CCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTATATTCGCTGAGCTCTaGTACCTCAGATGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSIFAEL*YLRWGR
Trigger: CCTGCCCCATCTGAGGTACCAGAGCTCAGCGAATAT...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCCTGGCTGTCATATCCTaGTTTGCAGCGACACTCCGC +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSLAVIS*FAATLR
Trigger: GCGGAGTGTCGCTGCAAACCAGGATATGACAGCCAG...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATCCGTCCAGGCTCCCCTaGCTGTCATATCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: FMRLERPASPCVSSHLLNPSRLP*LSYPGL
Trigger: CAAACCAGGATATGACAGCCAGGGGAGCCTGGACGG...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTTTCACCTGGGCTGGCTaGGCTGAGGTCCCGTTGGGT +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIFTWAG*AEVPLG
Trigger: ACCCAACGGGACCTCAGCCCAGCCAGCCCAGGTGAA...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369952.3
CDS-3UTR TCA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCCAGCGAGCTCTGCCTTaGACTTCTGGTTTACCAGAG +
Preference number: 4 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETQRALP*TSGLPE
Trigger: CTCTGGTAAACCAGAAGTTCAAGGCAGAGCTCGCTG...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCAGATGTGGGCAGCTCTaGTTGGGTGTCAGGACCAAA +
Preference number: 4 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETRCGQL*LGVRTK
Trigger: TTTGGTCCTGACACCCAATCAGAGCTGCCCACATCT...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCCCAGAGAGCTCTTGTTaGACAGGTCGTTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSPESSC*TGRWRR
Trigger: CCTTCTCCAACGACCTGTTCAACAAGAGCTCTCTGG...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCGAACCAGCAGCTGTGTaGATTGTTGCTCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETEPAAV*IVAPEL
Trigger: GAGCTCTGGAGCAACAATTCACACAGCTGCTGGTTC...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATCTGAGCTCCACCCTCTaGTCCTCCAACACAGCGAAT +
Preference number: 4 (lower is better)
Translates to: FMRLERPASPCVSSHLLNLSSTL*SSNTAN
Trigger: ATTCGCTGTGTTGGAGGAGCAGAGGGTGGAGCTCAG...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTCCTCGCATTCCTTTGTaGCAGGGCCACAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIPRIPL*QGHRGL
Trigger: CAGGCCTCTGTGGCCCTGGCACAAAGGAATGCGAGG...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR CCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCATATTCGCTGAGCTCTaGTACCTCAGATGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSIFAEL*YLRWGR
Trigger: CCTGCCCCATCTGAGGTACCAGAGCTCAGCGAATAT...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATCTGGCTGTCATATCCTaGTTTGCAGCGACACTCCGC +
Preference number: 4 (lower is better)
Translates to: FMRLERPASPCVSSHLLNLAVIS*FAATLR
Trigger: GCGGAGTGTCGCTGCAAACCAGGATATGACAGCCAG...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCAATTCAGGCTTCACCTaGGCTGGCTGGGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIINSGFT*AGWAEV
Trigger: GACCTCAGCCCAGCCAGCCCAGGTGAAGCCTGAATT...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369952.3
CDS-3UTR TCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATAGATGTGGGCAGCTCTaGTTGGGTGTCAGGACCAAA +
Preference number: 4 (lower is better)
Translates to: FMRLERPASPCVSSHLLNRCGQL*LGVRTK
Trigger: TTTGGTCCTGACACCCAATCAGAGCTGCCCACATCT...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTTTTCATCTAGGTGTCTaGCCATATCTTCGCCACCTG +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSFHLGV*PYLRHL
Trigger: CAGGTGGCGAAGATATGGTCAGACACCTAGATGAAA...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCAGAAACATATTCGCTaGGCTCTGGTACCTCAGATG +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSQKHIR*ALVPQM
Trigger: CATCTGAGGTACCAGAGCTCAGCGAATATGTTTCTG...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATCCAGAGAGCTCTTGTTaGACAGGTCGTTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: FMRLERPASPCVSSHLLNPESSC*TGRWRR
Trigger: CCTTCTCCAACGACCTGTTCAACAAGAGCTCTCTGG...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCGGAGTCAGCGAGCTCTaGCTTGAACTTCTGGTTTAC +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSGVSEL*LELLVY
Trigger: GTAAACCAGAAGTTCAAGGCAGAGCTCGCTGACTCC...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCTCCTCCAAGACCCCGTaGACAGCCTTGGTGAGGTTA +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIISSKTP*TALVRL
Trigger: TAACCTCACCAAGGCTGTGCACGGGGTCTTGGAGGA...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTATGGAGTTGTTGGGCTaGAGCAGAACGAAAATCCTC +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSMELLG*SRTKIL
Trigger: GAGGATTTTCGTTCTGCTGCAGCCCAACAACTCCAT...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCCGCAGGCCAGGAACTTaGAGGGATCTGCTTGATCAG +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIRRPGT*RDLLDQ
Trigger: CTGATCAAGCAGATCCCTGCAAGTTCCTGGCCTGCG...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR GCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCTGTCATATCCTGGTTTaGAGCGACACTCCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSCHILV*SDTPLP
Trigger: AGGAAGCGGAGTGTCGCTGCAAACCAGGATATGACA...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCGCATTGTCTGGTCAGTaGCCATTGTATCTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSALSGQ*PLYLWC
Trigger: GCACCACAGATACAATGGCCACTGACCAGACAATGC...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCCTCTGGTACCTCAGATaGGGCAGGAGTGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIILWYLR*GRSVRQ
Trigger: CTGTCTGACACTCCTGCCCCATCTGAGGTACCAGAG...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCCTGGCTGTCATATCCTaGTTTGCAGCGACACTCCGC +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIILAVIS*FAATLR
Trigger: GCGGAGTGTCGCTGCAAACCAGGATATGACAGCCAG...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR CCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTCCGTCCAGGCTCCCCTaGCTGTCATATCCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIPSRLP*LSYPGL
Trigger: CAAACCAGGATATGACAGCCAGGGGAGCCTGGACGG...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR TCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAAGGGTGTCATCAGGAGTaGGAGGGAAAGGCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKGCHQE*EGKAQV
Trigger: CACTTGGGCCTTTCCCTCTCACTCCTGATGACACCC...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTTATCGAGAATTTCATTaGGGAGGGTGTCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSYREFH*GGCHQE
Trigger: CTCCTGATGACACCCTCCTCAATGAAATTCTCGATA...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCGTATCTGTGGTGCCTTaGTCAGTCAGAGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSVSVVP*SVREKM
Trigger: CATCTTCTCTCTGACTGATCAAGGCACCACAGATAC...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAACACTGGTGGGGATGGTaGGCCCTGGTACTAGCATTG +
Preference number: 4 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKHWWGW*ALVLAL
Trigger: CAATGCTAGTACCAGGGCTCACCATCCCCACCAGTG...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATCCAGAGCCAGTTGGCTaGTTGCAGAATAATCACTGG +
Preference number: 4 (lower is better)
Translates to: FMRLERPASPCVSSHLLNPEPVG*LQNNHW
Trigger: CCAGTGATTATTCTGCAATCAGCCAACTGGCTCTGG...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATAGATGCAGGTGGATGTaGAATTCCCAGAGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: FMRLERPASPCVSSHLLNRCRWM*NSQSQL
Trigger: CAACTGGCTCTGGGAATTTCACATCCACCTGCATCT...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTCGTGCACAGCCTTGGTaGGGTTATACGGCACTGACT +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIRAQPW*GYTALT
Trigger: AGTCAGTGCCGTATAACCTCACCAAGGCTGTGCACG...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCAAGATGGCCGTAAGTTaGATCTCTGTGGAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSKMAVS*ISVELE
Trigger: CTCAAGCTCCACAGAGATGCAACTTACGGCCATCTT...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTACTTGCAGGGCTTTTTaGTTCTGCACTGTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSTCRAF*FCTVSL
Trigger: AAGAGACACAGTGCAGAAGCAAAAAGCCCTGCAAGT...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATAGCTGTGTGAATTGTTaGTCCAGAGCTCGGTACTCC +
Preference number: 4 (lower is better)
Translates to: FMRLERPASPCVSSHLLNSCVNC*SRARYS
Trigger: GGAGTACCGAGCTCTGGAGCAACAATTCACACAGCT...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTCGCAGGCCAGGAACTTaGAGGGATCTGCTTGATCAG +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIRRPGT*RDLLDQ
Trigger: CTGATCAAGCAGATCCCTGCAAGTTCCTGGCCTGCG...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR GCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCAGTGATCTGGCAACCTaGATGGAGCTCCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIISDLAT*MELPFP
Trigger: AGGGAAAGGGAGCTCCATGCAGGTTGCCAGATCACT...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR CCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTTTTCATGGATTCCTGTaGACAGACTTTAACCCCCGT +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSFHGFL*TDFNPR
Trigger: ACGGGGGTTAAAGTCTGTCCACAGGAATCCATGAAA...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369950.8
CDS-3UTR CCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTTGTTTTATTCTCTGCTaGAGAAGATCCAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSCFILC*RRSRCS
Trigger: GGAGCACCTGGATCTTCTCCAGCAGAGAATAAAACA...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCGCTTGTCCTCCTCCATaGTTCCATGATAGACTTCCT +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSACPPP*FHDRLP
Trigger: AGGAAGTCTATCATGGAACCATGGAGGAGGACAAGC...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATTCCACTGTCTCAAGCTaGGGTTCAACAGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: FMRLERPASPCVSSHLLNSTVSS*GSTGGS
Trigger: ACTTCCTCCTGTTGAACCCCAGCTTGAGACAGTGGA...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCTGGCCATTGTATCTGTaGTGCCTTGATCAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSWPLYL*CLDQSE
Trigger: CTCTGACTGATCAAGGCACCACAGATACAATGGCCA...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTCTCTGGTACCTCAGATaGGGCAGGAGTGTCAGACAG +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLILWYLR*GRSVRQ
Trigger: CTGTCTGACACTCCTGCCCCATCTGAGGTACCAGAG...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCCTGTCTATTTCCAGATaGAGTTGTTGGGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETLSISR*SCWAAA
Trigger: TGCTGCAGCCCAACAACTCCATCTGGAAATAGACAG...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTCTGTGGAGCTTaGGCCATCTTTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSHLCGA*AIFFFL
Trigger: AAGAAAGAAAAAGATGGCTCAAGCTCCACAGAGATG...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTGAACCAGCAGCTGTGTaGATTGTTGCTCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIEPAAV*IVAPEL
Trigger: GAGCTCTGGAGCAACAATTCACACAGCTGCTGGTTC...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTGCTGATTCTCAGTGTTaGCTGTATGTCTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSADSQC*LYVWIL
Trigger: CAAAATCCAGACATACAGTCAACACTGAGAATCAGC...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCCAGAAAGATCCGATATaGTTCCCATACTGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETQKDPI*FPYCFL
Trigger: CAGGAAGCAGTATGGGAAGCATATCGGATCTTTCTG...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTCCCCTGTGTCAGGGATaGGATCCAGAAAGATCCGAT +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIPLCQG*DPERSD
Trigger: ATCGGATCTTTCTGGATCGCATCCCTGACACAGGGG...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCTGGAGAAGATCCAGGTaGTCCTGGGAATTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIWRRSR*SWELLK
Trigger: CTTCAGCAATTCCCAGGAGCACCTGGATCTTCTCCA...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCCTCTGTTTTATTCTCTaGTGGAGAAGATCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETLCFIL*WRRSRC
Trigger: GCACCTGGATCTTCTCCAGCAGAGAATAAAACAGAG...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCAGACAGGAGGTCACTTaGAGGGCTTTTTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIRQEVT*RAFCFC
Trigger: GCAGAAGCAAAAAGCCCTGCAAGTGACCTCCTGTCT...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTAGTGATCTGGCAACCTaGATGGAGCTCCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLISDLAT*MELPFP
Trigger: AGGGAAAGGGAGCTCCATGCAGGTTGCCAGATCACT...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR GCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTAGACCTGCATCTCCCTaGGTAAGTAGTCATCTTTTA +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSRPASP*VSSHLL
Trigger: TAAAAGATGACTACTTACGCAGGGAGATGCAGGTCT...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTATATGCTTCCCATACTaGTTCCTGACACACTTTGGT +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSICFPY*FLTHFG
Trigger: ACCAAAGTGTGTCAGGAAGCAGTATGGGAAGCATAT...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611179.4
CDS-3UTR CCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTGACTTTAACCCCCGTTaGGAAAAATGCGGATCTTTT +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSDFNPR*EKCGSF
Trigger: AAAAGATCCGCATTTTTCCCAACGGGGGTTAAAGTC...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369950.8
CDS-3UTR CCA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCAACAGGAGGAAGTTCTaGACTCAAAGTAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETNRRKF*TQSSIL
Trigger: GAGGATGCTACTTTGAGTCCAGAACTTCCTCCTGTT...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCTCCACTGTCTCAAGCTaGGGTTCAACAGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIISTVSS*GSTGGS
Trigger: ACTTCCTCCTGTTGAACCCCAGCTTGAGACAGTGGA...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCGCATTGTCTGGTCAGTaGCCATTGTATCTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIALSGQ*PLYLWC
Trigger: GCACCACAGATACAATGGCCACTGACCAGACAATGC...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATCTGTCTATTTCCAGATaGAGTTGTTGGGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FMRLERPASPCVSSHLLNLSISR*SCWAAA
Trigger: TGCTGCAGCCCAACAACTCCATCTGGAAATAGACAG...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCTCGTTCTTTACACATTaGGCAAATTCGCCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIISFFTH*ANSPQA
Trigger: GGCCTGCGGCGAATTTGCCCAATGTGTAAAGAACGA...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR TCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAACAGCGAGCTCTGCCTTaGACTTCTGGTTTACCAGAG +
Preference number: 4 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKQRALP*TSGLPE
Trigger: CTCTGGTAAACCAGAAGTTCAAGGCAGAGCTCGCTG...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCCATCTCTGTGGAGCTTaGGCCATCTTTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSHLCGA*AIFFFL
Trigger: AAGAAAGAAAAAGATGGCTCAAGCTCCACAGAGATG...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCCAGCAATTTCATCAGTaGACTGAATTGTCCCCACAT +
Preference number: 4 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETQQFHQ*TELSPH
Trigger: ATGTGGGGACAATTCAGTTCACTGATGAAATTGCTG...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCCAGCAATTTCATCAGTaGACTGAATTGTCCCCACAT +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSQQFHQ*TELSPH
Trigger: ATGTGGGGACAATTCAGTTCACTGATGAAATTGCTG...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCGTATCTGTGGTGCCTTaGTCAGTCAGAGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIVSVVP*SVREKM
Trigger: CATCTTCTCTCTGACTGATCAAGGCACCACAGATAC...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTCCAGAGCCAGTTGGCTaGTTGCAGAATAATCACTGG +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIPEPVG*LQNNHW
Trigger: CCAGTGATTATTCTGCAATCAGCCAACTGGCTCTGG...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCCAGAAACATATTCGCTaGGCTCTGGTACCTCAGATG +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIQKHIR*ALVPQM
Trigger: CATCTGAGGTACCAGAGCTCAGCGAATATGTTTCTG...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTGAGGTTATACGGCACTaGCTTAGCAAACTTCATTTT +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSEVIRH*LSKLHF
Trigger: AAAATGAAGTTTGCTAAGTCAGTGCCGTATAACCTC...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCCAGCTGGTTCAATGTTaGGAGAGTAGCTGTCTATTT +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSQLVQC*ESSCLF
Trigger: AAATAGACAGCTACTCTCTCAACATTGAACCAGCTG...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCTTGCAGGGATCTGCTTaGTCAGCTGGTTCAATGTTG +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIILQGSA*SAGSML
Trigger: CAACATTGAACCAGCTGATCAAGCAGATCCCTGCAA...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCTGTCTCCATTTTCCTTaGGAAGGCAAATCATCTCTC +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSCLHFP*EGKSSL
Trigger: GAGAGATGATTTGCCTTCTCAAGGAAAATGGAGACA...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCGTGATACATCTCCTTTaGTTGGATCCTGTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIVIHLL*LDPVQG
Trigger: CCCTTGGACAGGATCCAATCAAAGGAGATGTATCAC...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369952.3
CDS-3UTR GCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTGGAGTCAGCGAGCTCTaGCTTGAACTTCTGGTTTAC +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIGVSEL*LELLVY
Trigger: GTAAACCAGAAGTTCAAGGCAGAGCTCGCTGACTCC...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATCCATTGTATCTGTGGTaGCTTGATCAGTCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: FMRLERPASPCVSSHLLNPLYLW*LDQSER
Trigger: TCTCTCTGACTGATCAAGGCACCACAGATACAATGG...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCAGCCAGTTGGCTGATTaGAGAATAATCACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIISQLAD*RIITGG
Trigger: CCCACCAGTGATTATTCTGCAATCAGCCAACTGGCT...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTAGCTGTGTGAATTGTTaGTCCAGAGCTCGGTACTCC +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLISCVNC*SRARYS
Trigger: GGAGTACCGAGCTCTGGAGCAACAATTCACACAGCT...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGAACTTGCAGGGATCTaGTTGATCAGCTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: FMRLERPASPCVSSHLLNELAGI*LISWFN
Trigger: ATTGAACCAGCTGATCAAGCAGATCCCTGCAAGTTC...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTTGTCATATCCTGGTTTaGAGCGACACTCCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLICHILV*SDTPLP
Trigger: AGGAAGCGGAGTGTCGCTGCAAACCAGGATATGACA...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR CCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCTCTGCCTTGAACTTCTaGTTTACCAGAGAGACGCTG +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIISALNF*FTRETL
Trigger: CAGCGTCTCTCTGGTAAACCAGAAGTTCAAGGCAGA...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCTGTGAGATAGATTTCTaGTTGCTTGTCCTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETCEIDF*LLVLLH
Trigger: ATGGAGGAGGACAAGCAACCAGAAATCTATCTCACA...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCTGGCCATTGTATCTGTaGTGCCTTGATCAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIWPLYL*CLDQSE
Trigger: CTCTGACTGATCAAGGCACCACAGATACAATGGCCA...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTATCTGCTTGATCAGCTaGTTCAATGTTGAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSICLIS*FNVERV
Trigger: TACTCTCTCAACATTGAACCAGCTGATCAAGCAGAT...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTTCGTTCTTTACACATTaGGCAAATTCGCCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLISFFTH*ANSPQA
Trigger: GGCCTGCGGCGAATTTGCCCAATGTGTAAAGAACGA...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR CCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCCTTCCTGACACACTTTaGTTCCTTGAACTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSLPDTL*FLELGE
Trigger: TTCTCCAAGTTCAAGGAACCAAAGTGTGTCAGGAAG...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611179.4
CDS-3UTR TCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCTATCGAGAATTTCATTaGGGAGGGTGTCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIYREFH*GGCHQE
Trigger: CTCCTGATGACACCCTCCTCAATGAAATTCTCGATA...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTTTGCAGGGATCTGCTTaGTCAGCTGGTTCAATGTTG +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLILQGSA*SAGSML
Trigger: CAACATTGAACCAGCTGATCAAGCAGATCCCTGCAA...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGCTGATTCTCAGTGTTaGCTGTATGTCTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: FMRLERPASPCVSSHLLNADSQC*LYVWIL
Trigger: CAAAATCCAGACATACAGTCAACACTGAGAATCAGC...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCAAATATGGTGTGTGCTaGTTCTCAGTGTTGACTGTA +
Preference number: 4 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETKYGVC*FSVLTV
Trigger: TACAGTCAACACTGAGAATCAGCACACACCATATTT...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTGTTGCAAATGATCTGTaGGTAAAATTTTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSVANDL*VKFSGK
Trigger: CTTCCCTGAAAATTTTACTCACAGATCATTTGCAAC...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTTTGCAGGGATCTGCTTaGTCAGGTGTTGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLILQGSA*SGVGQK
Trigger: TTTCTGTCCAACACCTGATCAAGCAGATCCCTGCAA...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369952.3
CDS-3UTR GCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCCTCTGTTTTATTCTCTaGTGGAGAAGATCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIILCFIL*WRRSRC
Trigger: GCACCTGGATCTTCTCCAGCAGAGAATAAAACAGAG...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTAAGATGGCCGTAAGTTaGATCTCTGTGGAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIKMAVS*ISVELE
Trigger: CTCAAGCTCCACAGAGATGCAACTTACGGCCATCTT...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCACTTGCAGGGCTTTTTaGTTCTGCACTGTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIITCRAF*FCTVSL
Trigger: AAGAGACACAGTGCAGAAGCAAAAAGCCCTGCAAGT...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAAAGACAGGAGGTCACTTaGAGGGCTTTTTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKRQEVT*RAFCFC
Trigger: GCAGAAGCAAAAAGCCCTGCAAGTGACCTCCTGTCT...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTATGGAGTTGTTGGGCTaGAGCAGAACGAAAATCCTC +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIMELLG*SRTKIL
Trigger: GAGGATTTTCGTTCTGCTGCAGCCCAACAACTCCAT...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTATACACTCACTACAGTaGCTACACACTACATACATT +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSIHSLQ*LHTTYI
Trigger: AATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTTCTGCCTTGAACTTCTaGTTTACCAGAGAGACGCTG +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLISALNF*FTRETL
Trigger: CAGCGTCTCTCTGGTAAACCAGAAGTTCAAGGCAGA...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTGCTTGTCCTCCTCCATaGTTCCATGATAGACTTCCT +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIACPPP*FHDRLP
Trigger: AGGAAGTCTATCATGGAACCATGGAGGAGGACAAGC...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCATCTGCTTGATCAGCTaGTTCAATGTTGAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSICLIS*FNVERV
Trigger: TACTCTCTCAACATTGAACCAGCTGATCAAGCAGAT...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAATCGTTCTTTACACATTaGGCAAATTCGCCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKSFFTH*ANSPQA
Trigger: GGCCTGCGGCGAATTTGCCCAATGTGTAAAGAACGA...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCCAACATCTGTTGAAATaGCAATGGTTTCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIQHLLK*QWFHQA
Trigger: AGCCTGGTGAAACCATTGTCATTTCAACAGATGTTG...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATATTTCATCAGTGAACTaGATTGTCCCCACATCCAAA +
Preference number: 4 (lower is better)
Translates to: FMRLERPASPCVSSHLLNISSVN*IVPTSK
Trigger: TTTGGATGTGGGGACAATTCAGTTCACTGATGAAAT...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAATTTCATCTAGGTGTCTaGCCATATCTTCGCCACCTG +
Preference number: 4 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKFHLGV*PYLRHL
Trigger: CAGGTGGCGAAGATATGGTCAGACACCTAGATGAAA...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCCAGCTGGTTCAATGTTaGGAGAGTAGCTGTCTATTT +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIQLVQC*ESSCLF
Trigger: AAATAGACAGCTACTCTCTCAACATTGAACCAGCTG...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCGCTGATTCTCAGTGTTaGCTGTATGTCTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIADSQC*LYVWIL
Trigger: CAAAATCCAGACATACAGTCAACACTGAGAATCAGC...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR GCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTTCCCAATGTCTTCTCTaGAGATATTTCATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSSQCLL*RYFIFS
Trigger: AGAAAAGATGAAATATCTGCAGAGAAGACATTGGGA...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAAAGCCAGTTGGCTGATTaGAGAATAATCACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKSQLAD*RIITGG
Trigger: CCCACCAGTGATTATTCTGCAATCAGCCAACTGGCT...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTGAACTTGCAGGGATCTaGTTGATCAGCTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIELAGI*LISWFN
Trigger: ATTGAACCAGCTGATCAAGCAGATCCCTGCAAGTTC...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCAGACCTGCATCTCCCTaGGTAAGTAGTCATCTTTTA +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIRPASP*VSSHLL
Trigger: TAAAAGATGACTACTTACGCAGGGAGATGCAGGTCT...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTAGTTGTTTCATTTCTTaGGGGATTGTCTATGTCTTT +
Preference number: 4 (lower is better)
Translates to: TLHTFMRLERPASPCVSSSCFIS*GIVYVF
Trigger: AAAGACATAGACAATCCCCCAAGAAATGAAACAACT...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369950.8
CDS-3UTR CCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTAACAGGAGGAAGTTCTaGACTCAAAGTAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLINRRKF*TQSSIL
Trigger: GAGGATGCTACTTTGAGTCCAGAACTTCCTCCTGTT...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCAATTTTCAGGGAAGGTaGAAGCAAACCTGGCTTATG +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIINFQGR*KQTWLM
Trigger: CATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR CCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTTACATCTCCTTTGATTaGATCCTGTCCAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIYISFD*ILSKGK
Trigger: CTTGCCCTTGGACAGGATCCAATCAAAGGAGATGTA...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369952.3
CDS-3UTR TCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCATTTCATCAGTGAACTaGATTGTCCCCACATCCAAA +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIISSVN*IVPTSK
Trigger: TTTGGATGTGGGGACAATTCAGTTCACTGATGAAAT...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCGAGGTTATACGGCACTaGCTTAGCAAACTTCATTTT +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIEVIRH*LSKLHF
Trigger: AAAATGAAGTTTGCTAAGTCAGTGCCGTATAACCTC...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTGTGTTGGACAGAAAGTaGTACATCTCCTTTGATTGG +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIVLDRK*YISFDW
Trigger: CCAATCAAAGGAGATGTATCACTTTCTGTCCAACAC...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369952.3
CDS-3UTR GCA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCACATTCTGGCTTTTGTaGATTGGTAATTCTGATAAC +
Preference number: 4 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSTFWLL*IGNSDN
Trigger: GTTATCAGAATTACCAATGCACAAAAGCCAGAATGT...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCTCCCAATGTCTTCTCTaGAGATATTTCATCTTTTCT +
Preference number: 4 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETSQCLL*RYFIFS
Trigger: AGAAAAGATGAAATATCTGCAGAGAAGACATTGGGA...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAACCATTGTATCTGTGGTaGCTTGATCAGTCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKPLYLW*LDQSER
Trigger: TCTCTCTGACTGATCAAGGCACCACAGATACAATGG...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAACAACATCTGTTGAAATaGCAATGGTTTCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKQHLLK*QWFHQA
Trigger: AGCCTGGTGAAACCATTGTCATTTCAACAGATGTTG...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTGCATCTTGGTGTCGTTaGGTGTATTATCGAGAATTT +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIASWCR*VYYREF
Trigger: AAATTCTCGATAATACACTCAACGACACCAAGATGC...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCAGTGTGCCTAATAACTaGATACTGAGGTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIISVPNN*ILRFVF
Trigger: AAACACAAACCTCAGTATTCAGTTATTAGGCACACT...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAAATATGCTTCCCATACTaGTTCCTGACACACTCTCAA +
Preference number: 4 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKICFPY*FLTHSQ
Trigger: TTGAGAGTGTGTCAGGAAGCAGTATGGGAAGCATAT...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369950.8
CDS-3UTR CCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAATGTGAGATAGATTTCTaGTTGCTTGTCCTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKCEIDF*LLVLLH
Trigger: ATGGAGGAGGACAAGCAACCAGAAATCTATCTCACA...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTAGGTGGAAGCAAACCTaGCTTATGATCATTTTGACT +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIRWKQT*LMIILT
Trigger: AGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCT...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR CCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTTGCTTGATCAGGTGTTaGACAGAAAGTGATACATCT +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLICLIRC*TESDTS
Trigger: AGATGTATCACTTTCTGTCCAACACCTGATCAAGCA...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369952.3
CDS-3UTR TCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAAGCATCTTGGTGTCGTTaGGTGTATTATCGAGAATTT +
Preference number: 4 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKASWCR*VYYREF
Trigger: AAATTCTCGATAATACACTCAACGACACCAAGATGC...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR TCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTGTTGCAAATGATCTGTaGGTAAAATTTTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIVANDL*VKFSGK
Trigger: CTTCCCTGAAAATTTTACTCACAGATCATTTGCAAC...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR GCA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCACATTCTGGCTTTTGTaGATTGGTAATTCTGATAAC +
Preference number: 4 (lower is better)
Translates to: NFQGRWKQTWLMIILTIITFWLL*IGNSDN
Trigger: GTTATCAGAATTACCAATGCACAAAAGCCAGAATGT...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTCTAAAATCTGTTTCATaGATTCCTGTGGACAGACTT +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLILKSVS*IPVDRL
Trigger: AAGTCTGTCCACAGGAATCCATGAAACAGATTTTAG...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369950.8
CDS-3UTR TCA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAAGTTGCAAATGATCTGTaGGTAAAATTTTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKVANDL*VKFSGK
Trigger: CTTCCCTGAAAATTTTACTCACAGATCATTTGCAAC...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR GCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTTTTTGTTCGATGCTTTaGCAAATCGAATATTCGTCT +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIFCSML*QIEYSS
Trigger: AGACGAATATTCGATTTGGCAAAGCATCGAACAAAA...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000369950.8
CDS-3UTR CCA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTAGTAAGATTTTTCCATaGTATGTGTATCTGAACCTC +
Preference number: 4 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLISKIFP*YVYLNL
Trigger: GAGGTTCAGATACACATACCATGGAAAAATCTTACT...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CCA 90 bp GTGCCAGGGCCACAGAGGCCTGGTTCCAGACCGTCCAGGCTCCCCTaGCTGTCATATCCTGGTTTGCAGCGACACTCCGCTTCCTCAGTC +
Preference number: 5 (lower is better)
Translates to: VPGPQRPGSRPSRLP*LSYPGLQRHSASSV
Trigger: GACTGAGGAAGCGGAGTGTCGCTGCAAACCAGGATATGACAGCCAGGGGAGCCTGGACGGTCTGGAACCAGGCCTCTGTGGCCCTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS CCA 90 bp GAGGCCTGGTTCCAGACCGTCCAGGCTCCCCTGGCTGTCATATCCTaGTTTGCAGCGACACTCCGCTTCCTCAGTCCGTTCGTTCTTTAC +
Preference number: 5 (lower is better)
Translates to: EAWFQTVQAPLAVIS*FAATLRFLSPFVLY
Trigger: GTAAAGAACGAACGGACTGAGGAAGCGGAGTGTCGCTGCAAACCAGGATATGACAGCCAGGGGAGCCTGGACGGTCTGGAACCAGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS GCA 90 bp CTGGTTCCAGACCGTCCAGGCTCCCCTGGCTGTCATATCCTGGTTTaGAGCGACACTCCGCTTCCTCAGTCCGTTCGTTCTTTACACATT +
Preference number: 5 (lower is better)
Translates to: LVPDRPGSPGCHILV*SDTPLPQSVRSLHI
Trigger: AATGTGTAAAGAACGAACGGACTGAGGAAGCGGAGTGTCGCTGCAAACCAGGATATGACAGCCAGGGGAGCCTGGACGGTCTGGAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS TCA 90 bp TCAAAGAGGCAGAAGGTCTCCTGCTGGCAGATGCTGACCCAGTCCTaGTATTCCCCTGTGTCAGGGATGCGATCCAGAAAGATCCGATAT +
Preference number: 5 (lower is better)
Translates to: SKRQKVSCWQMLTQS*YSPVSGMRSRKIRY
Trigger: ATATCGGATCTTTCTGGATCGCATCCCTGACACAGGGGAATATCAGGACTGGGTCAGCATCTGCCAGCAGGAGACCTTCTGCCTCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369963.5
ENST00000611179.4
CDS GCA 90 bp TGGAGTTGTTGGGCTGCAGCAGAACGAAAATCCTCCAAGACCCCGTaGACAGCCTTGGTGAGGTTATACGGCACTGACTTAGCAAACTTC +
Preference number: 5 (lower is better)
Translates to: WSCWAAAERKSSKTP*TALVRLYGTDLANF
Trigger: GAAGTTTGCTAAGTCAGTGCCGTATAACCTCACCAAGGCTGTGCACGGGGTCTTGGAGGATTTTCGTTCTGCTGCAGCCCAACAACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CCA 90 bp GAAGTGTCAGGTAGACCATGCTCTGCTCCGTCCACTGTCTCAAGCTaGGGTTCAACAGGAGGAAGTTCTGGACTCAAAGTAGCATCCTCT +
Preference number: 5 (lower is better)
Translates to: EVSGRPCSAPSTVSS*GSTGGSSGLKVASS
Trigger: AGAGGATGCTACTTTGAGTCCAGAACTTCCTCCTGTTGAACCCCAGCTTGAGACAGTGGACGGAGCAGAGCATGGTCTACCTGACACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTGGACCTCGCATTCCTTaGTGCCAGGGCCACAGAGGC +
Preference number: 5 (lower is better)
Translates to: TLHTFMRLERPASPCVSSGPRIP*CQGHRG
Trigger: GCCTCTGTGGCCCTGGCACAAAGGAATGCGAGGTCC...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS TCA 90 bp CAGATGGGGCAGGAGTGTCAGACAGATCCATTTCATCTAGGTGTCTaGCCATATCTTCGCCACCTGCACTTGATCGGCTGTCATCTGAAG +
Preference number: 5 (lower is better)
Translates to: QMGQECQTDPFHLGV*PYLRHLHLIGCHLK
Trigger: CTTCAGATGACAGCCGATCAAGTGCAGGTGGCGAAGATATGGTCAGACACCTAGATGAAATGGATCTGTCTGACACTCCTGCCCCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS GCA 90 bp GCCTTGAACTTCTGGTTTACCAGAGAGACGCTGAGCTCCACCCTCTaGTCCTCCAACACAGCGAATTCTGTTTCTCTTTCTGTTGTAGGC +
Preference number: 5 (lower is better)
Translates to: ALNFWFTRETLSSTL*SSNTANSVSLSVVG
Trigger: GCCTACAACAGAAAGAGAAACAGAATTCGCTGTGTTGGAGGAGCAGAGGGTGGAGCTCAGCGTCTCTCTGGTAAACCAGAAGTTCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS GCA 90 bp AATGTTGAGAGAGTAGCTGTCTATTTCCAGATGGAGTTGTTGGGCTaGAGCAGAACGAAAATCCTCCAAGACCCCGTGCACAGCCTTGGT +
Preference number: 5 (lower is better)
Translates to: NVERVAVYFQMELLG*SRTKILQDPVHSLG
Trigger: ACCAAGGCTGTGCACGGGGTCTTGGAGGATTTTCGTTCTGCTGCAGCCCAACAACTCCATCTGGAAATAGACAGCTACTCTCTCAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCACCCCGTGCACAGCCTaGGTGAGGTTATACGGCACT +
Preference number: 5 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSTPCTA*VRLYGT
Trigger: AGTGCCGTATAACCTCACCAAGGCTGTGCACGGGGT...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCACCCCGTGCACAGCCTaGGTGAGGTTATACGGCACT +
Preference number: 5 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETTPCTA*VRLYGT
Trigger: AGTGCCGTATAACCTCACCAAGGCTGTGCACGGGGT...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCGGACCTCGCATTCCTTaGTGCCAGGGCCACAGAGGC +
Preference number: 5 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIGPRIP*CQGHRG
Trigger: GCCTCTGTGGCCCTGGCACAAAGGAATGCGAGGTCC...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS GCA 90 bp CTGATATTCCCCTGTGTCAGGGATGCGATCCAGAAAGATCCGATATaGTTCCCATACTGCTTCCTGACACACTTTGGTTCCTTGAACTTG +
Preference number: 5 (lower is better)
Translates to: LIFPCVRDAIQKDPI*FPYCFLTHFGSLNL
Trigger: CAAGTTCAAGGAACCAAAGTGTGTCAGGAAGCAGTATGGGAAGCATATCGGATCTTTCTGGATCGCATCCCTGACACAGGGGAATATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611179.4
CDS-3UTR CAA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCGCCCTGGTACTAGCATaGTCTGGTCAGTGGCCATTG +
Preference number: 5 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSALVLA*SGQWPL
Trigger: CAATGGCCACTGACCAGACAATGCTAGTACCAGGGC...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCAGCAGCTGTGTGAATaGTTGCTCCAGAGCTCGGTA +
Preference number: 5 (lower is better)
Translates to: TLHTFMRLERPASPCVSSQQLCE*LLQSSV
Trigger: TACCGAGCTCTGGAGCAACAATTCACACAGCTGCTG...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTGGACCTCGCATTCCTTaGTGCCAGGGCCACAGAGGC +
Preference number: 5 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIGPRIP*CQGHRG
Trigger: GCCTCTGTGGCCCTGGCACAAAGGAATGCGAGGTCC...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS TCA 90 bp GGTACTAGCATTGTCTGGTCAGTGGCCATTGTATCTGTGGTGCCTTaGTCAGTCAGAGAGAAGATGCTTGATGCCATAAAGAAAGGTGGA +
Preference number: 5 (lower is better)
Translates to: GTSIVWSVAIVSVVP*SVREKMLDAIKKGG
Trigger: TCCACCTTTCTTTATGGCATCAAGCATCTTCTCTCTGACTGATCAAGGCACCACAGATACAATGGCCACTGACCAGACAATGCTAGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS GCA 90 bp GTTGGAATCAAAAGACAGGAGGTCACTTGCAGGGCTTTTTGCTTCTaGACTGTGTCTCTTAAAGATGGCCGTAAGTTGCATCTCTGTGGA +
Preference number: 5 (lower is better)
Translates to: VGIKRQEVTCRAFCF*TVSLKDGRKLHLCG
Trigger: TCCACAGAGATGCAACTTACGGCCATCTTTAAGAGACACAGTGCAGAAGCAAAAAGCCCTGCAAGTGACCTCCTGTCTTTTGATTCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTTCTGGTCAGTGGCCATaGTATCTGTGGTGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: TLHTFMRLERPASPCVSSSGQWP*YLWCLD
Trigger: ATCAAGGCACCACAGATACAATGGCCACTGACCAGA...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATCTTCGCCACCTGCACTaGATCGGCTGTCATCTGAAG +
Preference number: 5 (lower is better)
Translates to: FMRLERPASPCVSSHLLNLRHLH*IGCHLK
Trigger: CTTCAGATGACAGCCGATCAAGTGCAGGTGGCGAAG...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCACCAGCTCTCGGCCCTaGGGGGCAATGGTCATAGAA +
Preference number: 5 (lower is better)
Translates to: NFQGRWKQTWLMIILTIITSSRP*GAMVIE
Trigger: TTCTATGACCATTGCCCCCAAGGGCCGAGAGCTGGT...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCCAGCAGCTGTGTGAATaGTTGCTCCAGAGCTCGGTA +
Preference number: 5 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETQQLCE*LLQSSV
Trigger: TACCGAGCTCTGGAGCAACAATTCACACAGCTGCTG...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTTTCCAGATGGAGTTGTaGGGCTGCAGCAGAACGAAA +
Preference number: 5 (lower is better)
Translates to: TLHTFMRLERPASPCVSSFQMEL*GCSRTK
Trigger: TTTCGTTCTGCTGCAGCCCAACAACTCCATCTGGAA...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS GCA 90 bp CTGATATTCCCCTGTGTCAGGGATGCGATCCAGAAAGATCCGATATaGTTCCCATACTGCTTCCTGACACACTCTCAATCTATAATAAGC +
Preference number: 5 (lower is better)
Translates to: LIFPCVRDAIQKDPI*FPYCFLTHSQSIIS
Trigger: GCTTATTATAGATTGAGAGTGTGTCAGGAAGCAGTATGGGAAGCATATCGGATCTTTCTGGATCGCATCCCTGACACAGGGGAATATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000369963.5
CDS-3UTR CAA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCTCAGCGAGCTCTGCCTaGAACTTCTGGTTTACCAGA +
Preference number: 5 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETSASSA*NFWFTR
Trigger: TCTGGTAAACCAGAAGTTCAAGGCAGAGCTCGCTGA...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCCTTCGCCACCTGCACTaGATCGGCTGTCATCTGAAG +
Preference number: 5 (lower is better)
Translates to: NFQGRWKQTWLMIILTIILRHLH*IGCHLK
Trigger: CTTCAGATGACAGCCGATCAAGTGCAGGTGGCGAAG...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTACCAGCTCTCGGCCCTaGGGGGCAATGGTCATAGAA +
Preference number: 5 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLITSSRP*GAMVIE
Trigger: TTCTATGACCATTGCCCCCAAGGGCCGAGAGCTGGT...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCTCCAGAGAGCTCTTGTaGAACAGGTCGTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETSRELL*NRSLEK
Trigger: CTTCTCCAACGACCTGTTCAACAAGAGCTCTCTGGA...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCTACTCCAGAGAGCTCTaGTTGAACAGGTCGTTGGAG +
Preference number: 5 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETYSREL*LNRSLE
Trigger: CTCCAACGACCTGTTCAACAAGAGCTCTCTGGAGTA...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATCAGCTGTGTGAATTGTaGCTCCAGAGCTCGGTACTC +
Preference number: 5 (lower is better)
Translates to: FMRLERPASPCVSSHLLNQLCEL*LQSSVL
Trigger: GAGTACCGAGCTCTGGAGCAACAATTCACACAGCTG...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCTATTTCCAGATGGAGTaGTTGGGCTGCAGCAGAACG +
Preference number: 5 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETYFQME*LGCSRT
Trigger: CGTTCTGCTGCAGCCCAACAACTCCATCTGGAAATA...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCTTCGTTCTTTACACATaGGGCAAATTCGCCGCAGGC +
Preference number: 5 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSFVLYT*GKFAAG
Trigger: GCCTGCGGCGAATTTGCCCAATGTGTAAAGAACGAA...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCTTCGTTCTTTACACATaGGGCAAATTCGCCGCAGGC +
Preference number: 5 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETFVLYT*GKFAAG
Trigger: GCCTGCGGCGAATTTGCCCAATGTGTAAAGAACGAA...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS TCA 90 bp GTGATATACTGTAAAGCTGAGACAGGAGTGGTATCCTCCAAGAAATaGTCTGGGACAGAAACATATTCGCTGAGCTCTGGTACCTCAGAT +
Preference number: 5 (lower is better)
Translates to: VIYCKAETGVVSSKK*SGTETYSLSSGTSD
Trigger: ATCTGAGGTACCAGAGCTCAGCGAATATGTTTCTGTCCCAGATCATTTCTTGGAGGATACCACTCCTGTCTCAGCTTTACAGTATATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGGCCCAAGTGAGACGTaGGCAACATCTGTTGAAATG +
Preference number: 5 (lower is better)
Translates to: FMRLERPASPCVSSHLLNGPSET*ATSVEM
Trigger: CATTTCAACAGATGTTGCCAACGTCTCACTTGGGCC...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATAAGACAGGAGGTCACTaGCAGGGCTTTTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: FMRLERPASPCVSSHLLNKTGGH*QGFLLL
Trigger: CAGAAGCAAAAAGCCCTGCAAGTGACCTCCTGTCTT...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCGAGATAGATTTCTGGTaGCTTGTCCTCCTCCATGGT +
Preference number: 5 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSEIDFW*LVLLHG
Trigger: ACCATGGAGGAGGACAAGCAACCAGAAATCTATCTC...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCTTGCTGATCAGCCTTTaGAGGTCTGTAGCTGTGAGA +
Preference number: 5 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETLLISL*RSVAVR
Trigger: TCTCACAGCTACAGACCTCAAAAGGCTGATCAGCAA...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCTCTTCCTCTAGTGCTTaGCTGATCAGCCTTTTGAGG +
Preference number: 5 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETSSSSA*LISLLR
Trigger: CCTCAAAAGGCTGATCAGCAAAGCACTAGAGGAAGA...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTAATTCCCAGAGCCAGTaGGCTGATTGCAGAATAATC +
Preference number: 5 (lower is better)
Translates to: TLHTFMRLERPASPCVSSNSQSQ*ADCRII
Trigger: GATTATTCTGCAATCAGCCAACTGGCTCTGGGAATT...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCTTGTTGAACAGGTCGTaGGAGAAGGCCATGTTAGCA +
Preference number: 5 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSLLNRS*EKAMLA
Trigger: TGCTAACATGGCCTTCTCCAACGACCTGTTCAACAA...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATTCCAGAGAGCTCTTGTaGAACAGGTCGTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: FMRLERPASPCVSSHLLNSRELL*NRSLEK
Trigger: CTTCTCCAACGACCTGTTCAACAAGAGCTCTCTGGA...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCCAGCTGTGTGAATTGTaGCTCCAGAGCTCGGTACTC +
Preference number: 5 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIQLCEL*LQSSVL
Trigger: GAGTACCGAGCTCTGGAGCAACAATTCACACAGCTG...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCCTTGCAGGGATCTGCTaGATCAGCTGGTTCAATGTT +
Preference number: 5 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETLAGIC*ISWFNV
Trigger: AACATTGAACCAGCTGATCAAGCAGATCCCTGCAAG...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTCTGTCATATCCTGGTTaGCAGCGACACTCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLILSYPG*QRHSAS
Trigger: GGAAGCGGAGTGTCGCTGCAAACCAGGATATGACAG...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR CAA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAAGCCCTGGTACTAGCATaGTCTGGTCAGTGGCCATTG +
Preference number: 5 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKALVLA*SGQWPL
Trigger: CAATGGCCACTGACCAGACAATGCTAGTACCAGGGC...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCTACTCCAGAGAGCTCTaGTTGAACAGGTCGTTGGAG +
Preference number: 5 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIYSREL*LNRSLE
Trigger: CTCCAACGACCTGTTCAACAAGAGCTCTCTGGAGTA...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCTTCGTTCTTTACACATaGGGCAAATTCGCCGCAGGC +
Preference number: 5 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIFVLYT*GKFAAG
Trigger: GCCTGCGGCGAATTTGCCCAATGTGTAAAGAACGAA...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR CAA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAACTGTCATATCCTGGTTaGCAGCGACACTCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKLSYPG*QRHSAS
Trigger: GGAAGCGGAGTGTCGCTGCAAACCAGGATATGACAG...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ATACACTCACTACAGTGCCTACACACTACATACATTCATGCGTTTAGAGAGACCTTATCGAGAATTTCATaGAGGAGGGTGTCATCAGGA +
Preference number: 5 (lower is better)
Translates to: IHSLQCLHTTYIHAFRETLSRIS*RRVSSG
Trigger: TCCTGATGACACCCTCCTCAATGAAATTCTCGATAA...GGTCTCTCTAAACGCATGAATGTATGTAGTGTGTAGGCACTGTAGTGAGTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCTCTGTTGTAGGCATCTaGGTGTCGTTGAGTGTATTA +
Preference number: 5 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSSVVGI*VSLSVL
Trigger: TAATACACTCAACGACACCAAGATGCCTACAACAGA...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTTCAGCGAGCTCTGCCTaGAACTTCTGGTTTACCAGA +
Preference number: 5 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLISASSA*NFWFTR
Trigger: TCTGGTAAACCAGAAGTTCAAGGCAGAGCTCGCTGA...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTCACTTGCAGGGCTTTTaGCTTCTGCACTGTGTCTCT +
Preference number: 5 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIHLQGF*LLHCVS
Trigger: AGAGACACAGTGCAGAAGCAAAAAGCCCTGCAAGTG...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTAAGACAGGAGGTCACTaGCAGGGCTTTTTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIKTGGH*QGFLLL
Trigger: CAGAAGCAAAAAGCCCTGCAAGTGACCTCCTGTCTT...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTTCTGGTCAGTGGCCATaGTATCTGTGGTGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLISGQWP*YLWCLD
Trigger: ATCAAGGCACCACAGATACAATGGCCACTGACCAGA...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCTTGTTGAACAGGTCGTaGGAGAAGGCCATGTTAGCA +
Preference number: 5 (lower is better)
Translates to: NFQGRWKQTWLMIILTIILLNRS*EKAMLA
Trigger: TGCTAACATGGCCTTCTCCAACGACCTGTTCAACAA...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTTATTTCCAGATGGAGTaGTTGGGCTGCAGCAGAACG +
Preference number: 5 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIYFQME*LGCSRT
Trigger: CGTTCTGCTGCAGCCCAACAACTCCATCTGGAAATA...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp GAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATGTACTTTCTAGCCTGTATGTCTGGATTTaGATGACCCATGAATATGCC +
Preference number: 5 (lower is better)
Translates to: ERPASPCVSSHLLNVLSSLYVWI*MTHEYA
Trigger: GGCATATTCATGGGTCATCAAAATCCAGACATACAG...GCTAGAAAGTACATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTCTTGCAGGGATCTGCTaGATCAGGTGTTGGACAGAA +
Preference number: 5 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLILAGIC*IRCWTE
Trigger: TTCTGTCCAACACCTGATCAAGCAGATCCCTGCAAG...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369952.3
CDS-3UTR CAA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTTCTGGCTTTTGTGCATaGGTAATTCTGATAACAATC +
Preference number: 5 (lower is better)
Translates to: TLHTFMRLERPASPCVSSSGFCA*VILITI
Trigger: GATTGTTATCAGAATTACCAATGCACAAAAGCCAGA...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATTTATCGAGAATTTCATaGAGGAGGGTGTCATCAGGA +
Preference number: 5 (lower is better)
Translates to: FMRLERPASPCVSSHLLNLSRIS*RRVSSG
Trigger: TCCTGATGACACCCTCCTCAATGAAATTCTCGATAA...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTGAGATAGATTTCTGGTaGCTTGTCCTCCTCCATGGT +
Preference number: 5 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIEIDFW*LVLLHG
Trigger: ACCATGGAGGAGGACAAGCAACCAGAAATCTATCTC...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTTTAAATCCTGTAAGATaGGATCGTAGATATGGAACC +
Preference number: 5 (lower is better)
Translates to: TLHTFMRLERPASPCVSSLNPVR*DRRYGT
Trigger: GGTTCCATATCTACGATCCAATCTTACAGGATTTAA...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACACTACATACATTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTACTAGTTTTGTATGCTaGATTTTCAGAGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: TLHTFMRLERPASPCVSSTSFVC*IFRVIW
Trigger: CCAGATCACTCTGAAAATCAAGCATACAAAACTAGT...ACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAATGTATGTAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATCTGTCTCCATTTTCCTaGAGAAGGCAAATCATCTCT +
Preference number: 5 (lower is better)
Translates to: FMRLERPASPCVSSHLLNLSPFS*RRQIIS
Trigger: AGAGATGATTTGCCTTCTCAAGGAAAATGGAGACAG...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATCTGTATGTCTGGATTTaGATGACCCATGAATATGCC +
Preference number: 5 (lower is better)
Translates to: FMRLERPASPCVSSHLLNLYVWI*MTHEYA
Trigger: GGCATATTCATGGGTCATCAAAATCCAGACATACAG...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCGGCATCTTGGTGTCGTaGAGTGTATTATCGAGAATT +
Preference number: 5 (lower is better)
Translates to: NFQGRWKQTWLMIILTIIGILVS*SVLSRI
Trigger: AATTCTCGATAATACACTCAACGACACCAAGATGCC...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTGCATCTCTGTGGAGCTaGAGCCATCTTTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIASLWS*SHLFLS
Trigger: AGAAAGAAAAAGATGGCTCAAGCTCCACAGAGATGC...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAATTGCTGATCAGCCTTTaGAGGTCTGTAGCTGTGAGA +
Preference number: 5 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKLLISL*RSVAVR
Trigger: TCTCACAGCTACAGACCTCAAAAGGCTGATCAGCAA...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAATCTTCCTCTAGTGCTTaGCTGATCAGCCTTTTGAGG +
Preference number: 5 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKSSSSA*LISLLR
Trigger: CCTCAAAAGGCTGATCAGCAAAGCACTAGAGGAAGA...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAACTTGCAGGGATCTGCTaGATCAGCTGGTTCAATGTT +
Preference number: 5 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKLAGIC*ISWFNV
Trigger: AACATTGAACCAGCTGATCAAGCAGATCCCTGCAAG...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTAGTGATACATCTCCTTaGATTGGATCCTGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLISDTSP*IGSCPR
Trigger: CCTTGGACAGGATCCAATCAAAGGAGATGTATCACT...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369952.3
CDS-3UTR CAA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATACACACTTTGGTTCCTaGAACTTGGAGAAAAATCCA +
Preference number: 5 (lower is better)
Translates to: FMRLERPASPCVSSHLLNTHFGS*NLEKNP
Trigger: TGGATTTTTCTCCAAGTTCAAGGAACCAAAGTGTGT...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611179.4
CDS-3UTR CAA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATTCTGGCTTTTGTGCATaGGTAATTCTGATAACAATC +
Preference number: 5 (lower is better)
Translates to: FMRLERPASPCVSSHLLNSGFCA*VILITI
Trigger: GATTGTTATCAGAATTACCAATGCACAAAAGCCAGA...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATAAAATGCGGATCTTTTaGTTCGATGCTTTGCCAAAT +
Preference number: 5 (lower is better)
Translates to: FMRLERPASPCVSSHLLNKMRIF*FDALPN
Trigger: ATTTGGCAAAGCATCGAACAAAAAGATCCGCATTTT...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369950.8
CDS-3UTR CAA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTGGCATCTTGGTGTCGTaGAGTGTATTATCGAGAATT +
Preference number: 5 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIGILVS*SVLSRI
Trigger: AATTCTCGATAATACACTCAACGACACCAAGATGCC...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAATGTATCTGTGGTGCCTaGATCAGTCAGAGAGAAGAT +
Preference number: 5 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKCICGA*ISQRED
Trigger: ATCTTCTCTCTGACTGATCAAGGCACCACAGATACA...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAAAATTCCCAGAGCCAGTaGGCTGATTGCAGAATAATC +
Preference number: 5 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKNSQSQ*ADCRII
Trigger: GATTATTCTGCAATCAGCCAACTGGCTCTGGGAATT...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp TTCATGCGTTTAGAGAGACCTGCATCTCCCTGCGTAAGTAGTCATCTTTTAAATACTAGTTTTGTATGCTaGATTTTCAGAGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: FMRLERPASPCVSSHLLNTSFVC*IFRVIW
Trigger: CCAGATCACTCTGAAAATCAAGCATACAAAACTAGT...ATTTAAAAGATGACTACTTACGCAGGGAGATGCAGGTCTCTCTAAACGCATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTCAGTTGTTTCATTTCTaGGGGGATTGTCTATGTCTT +
Preference number: 5 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLIQLFHF*GDCLCL
Trigger: AAGACATAGACAATCCCCCAAGAAATGAAACAACTG...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369950.8
CDS-3UTR CAA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAATCTGTTGTAGGCATCTaGGTGTCGTTGAGTGTATTA +
Preference number: 5 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKSVVGI*VSLSVL
Trigger: TAATACACTCAACGACACCAAGATGCCTACAACAGA...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp AATTTTCAGGGAAGGTGGAAGCAAACCTGGCTTATGATCATTTTGACTATCATCTTAAATCCTGTAAGATaGGATCGTAGATATGGAACC +
Preference number: 5 (lower is better)
Translates to: NFQGRWKQTWLMIILTIILNPVR*DRRYGT
Trigger: GGTTCCATATCTACGATCCAATCTTACAGGATTTAA...GATGATAGTCAAAATGATCATAAGCCAGGTTTGCTTCCACCTTCCCTGAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS-3UTR CAA 90 bp ACTGGTTGCCAAGTACATGACTCTTCTATATTTGAAATATGGTGTGTGCTGATTACTAGTTTTGTATGCTaGATTTTCAGAGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: TGCQVHDSSIFEIWCVLITSFVC*IFRVIW
Trigger: CCAGATCACTCTGAAAATCAAGCATACAAAACTAGT...AATCAGCACACACCATATTTCAAATATAGAAGAGTCATGTACTTGGCAACCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS-3UTR CAA 90 bp ATTATGTCATATAGTACAACTTCGCCCTTCTCCCAACATAGCATCTTCTTTAAATTTTTGTTCGATGCTTaGCCAAATCGAATATTCGTC +
Preference number: 5 (lower is better)
Translates to: IMSYSTTSPFSQHSIFFKFLFDA*PNRIFV
Trigger: GACGAATATTCGATTTGGCAAAGCATCGAACAAAAA...TTTAAAGAAGATGCTATGTTGGGAGAAGGGCGAAGTTGTACTATATGACATAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369950.8
CDS CCA 72 bp CCACAGAGGCCTGGTTCCAGACCGTCCAGGCTCCCCTaGCTGTCATATCCTGGTTTGCAGCGACACTCCGCT +
Preference number: 6 (lower is better)
Translates to: PQRPGSRPSRLP*LSYPGLQRHSA
Trigger: AGCGGAGTGTCGCTGCAAACCAGGATATGACAGCCAGGGGAGCCTGGACGGTCTGGAACCAGGCCTCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS GCA 72 bp GACCGTCCAGGCTCCCCTGGCTGTCATATCCTGGTTTaGAGCGACACTCCGCTTCCTCAGTCCGTTCGTTCT +
Preference number: 6 (lower is better)
Translates to: DRPGSPGCHILV*SDTPLPQSVRS
Trigger: AGAACGAACGGACTGAGGAAGCGGAGTGTCGCTGCAAACCAGGATATGACAGCCAGGGGAGCCTGGACGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS CCA 72 bp GGGGACTGGGAGTCAGCGAGCTCTGCCTTGAACTTCTaGTTTACCAGAGAGACGCTGAGCTCCACCCTCTGC +
Preference number: 6 (lower is better)
Translates to: GDWESASSALNF*FTRETLSSTLC
Trigger: GCAGAGGGTGGAGCTCAGCGTCTCTCTGGTAAACCAGAAGTTCAAGGCAGAGCTCGCTGACTCCCAGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CCA 72 bp TTCCAGACCGTCCAGGCTCCCCTGGCTGTCATATCCTaGTTTGCAGCGACACTCCGCTTCCTCAGTCCGTTC +
Preference number: 6 (lower is better)
Translates to: FQTVQAPLAVIS*FAATLRFLSPF
Trigger: GAACGGACTGAGGAAGCGGAGTGTCGCTGCAAACCAGGATATGACAGCCAGGGGAGCCTGGACGGTCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS CAA 72 bp AGACCGTCCAGGCTCCCCTGGCTGTCATATCCTGGTTaGCAGCGACACTCCGCTTCCTCAGTCCGTTCGTTC +
Preference number: 6 (lower is better)
Translates to: RPSRLPWLSYPG*QRHSASSVRSF
Trigger: GAACGAACGGACTGAGGAAGCGGAGTGTCGCTGCAAACCAGGATATGACAGCCAGGGGAGCCTGGACGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS CAA 90 bp CCTGGTTCCAGACCGTCCAGGCTCCCCTGGCTGTCATATCCTGGTTaGCAGCGACACTCCGCTTCCTCAGTCCGTTCGTTCTTTACACAT +
Preference number: 6 (lower is better)
Translates to: PGSRPSRLPWLSYPG*QRHSASSVRSFFTH
Trigger: ATGTGTAAAGAACGAACGGACTGAGGAAGCGGAGTGTCGCTGCAAACCAGGATATGACAGCCAGGGGAGCCTGGACGGTCTGGAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS TCA 72 bp CAGAAGGTCTCCTGCTGGCAGATGCTGACCCAGTCCTaGTATTCCCCTGTGTCAGGGATGCGATCCAGAAAG +
Preference number: 6 (lower is better)
Translates to: QKVSCWQMLTQS*YSPVSGMRSRK
Trigger: CTTTCTGGATCGCATCCCTGACACAGGGGAATATCAGGACTGGGTCAGCATCTGCCAGCAGGAGACCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369963.5
ENST00000611179.4
CDS CCA 72 bp CACTCCGCTTCCTCAGTCCGTTCGTTCTTTACACATTaGGCAAATTCGCCGCAGGCCAGGAACTTGCAGGGA +
Preference number: 6 (lower is better)
Translates to: HSASSVRSFFTH*ANSPQARNLQG
Trigger: TCCCTGCAAGTTCCTGGCCTGCGGCGAATTTGCCCAATGTGTAAAGAACGAACGGACTGAGGAAGCGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS CAA 72 bp ACACTCCGCTTCCTCAGTCCGTTCGTTCTTTACACATaGGGCAAATTCGCCGCAGGCCAGGAACTTGCAGGG +
Preference number: 6 (lower is better)
Translates to: TLRFLSPFVLYT*GKFAAGQELAG
Trigger: CCCTGCAAGTTCCTGGCCTGCGGCGAATTTGCCCAATGTGTAAAGAACGAACGGACTGAGGAAGCGGAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS CAA 90 bp TTTGCAGCGACACTCCGCTTCCTCAGTCCGTTCGTTCTTTACACATaGGGCAAATTCGCCGCAGGCCAGGAACTTGCAGGGATCTGCTTG +
Preference number: 6 (lower is better)
Translates to: FAATLRFLSPFVLYT*GKFAAGQELAGICL
Trigger: CAAGCAGATCCCTGCAAGTTCCTGGCCTGCGGCGAATTTGCCCAATGTGTAAAGAACGAACGGACTGAGGAAGCGGAGTGTCGCTGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369950.8
ENST00000369952.3
ENST00000611179.4
CDS GCA 72 bp CTCCTGGTAATATGGGGACTGGGAGTCAGCGAGCTCTaGCTTGAACTTCTGGTTTACCAGAGAGACGCTGAG +
Preference number: 6 (lower is better)
Translates to: LLVIWGLGVSEL*LELLVYQRDAE
Trigger: CTCAGCGTCTCTCTGGTAAACCAGAAGTTCAAGGCAGAGCTCGCTGACTCCCAGTCCCCATATTACCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS GCA 72 bp TGGGCTGCAGCAGAACGAAAATCCTCCAAGACCCCGTaGACAGCCTTGGTGAGGTTATACGGCACTGACTTA +
Preference number: 6 (lower is better)
Translates to: WAAAERKSSKTP*TALVRLYGTDL
Trigger: TAAGTCAGTGCCGTATAACCTCACCAAGGCTGTGCACGGGGTCTTGGAGGATTTTCGTTCTGCTGCAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CCA 72 bp GGTAGACCATGCTCTGCTCCGTCCACTGTCTCAAGCTaGGGTTCAACAGGAGGAAGTTCTGGACTCAAAGTA +
Preference number: 6 (lower is better)
Translates to: GRPCSAPSTVSS*GSTGGSSGLKV
Trigger: TACTTTGAGTCCAGAACTTCCTCCTGTTGAACCCCAGCTTGAGACAGTGGACGGAGCAGAGCATGGTCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 72 bp GCTCGGTACTCCAGAGAGCTCTTGTTGAACAGGTCGTaGGAGAAGGCCATGTTAGCAACACGCAGACTGAAG +
Preference number: 6 (lower is better)
Translates to: ARYSRELLLNRS*EKAMLATRRLK
Trigger: CTTCAGTCTGCGTGTTGCTAACATGGCCTTCTCCAACGACCTGTTCAACAAGAGCTCTCTGGAGTACCGAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 90 bp TGCTCCAGAGCTCGGTACTCCAGAGAGCTCTTGTTGAACAGGTCGTaGGAGAAGGCCATGTTAGCAACACGCAGACTGAAGAACACTACC +
Preference number: 6 (lower is better)
Translates to: CSRARYSRELLLNRS*EKAMLATRRLKNTT
Trigger: GGTAGTGTTCTTCAGTCTGCGTGTTGCTAACATGGCCTTCTCCAACGACCTGTTCAACAAGAGCTCTCTGGAGTACCGAGCTCTGGAGCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 90 bp TGTGTGAATTGTTGCTCCAGAGCTCGGTACTCCAGAGAGCTCTTGTaGAACAGGTCGTTGGAGAAGGCCATGTTAGCAACACGCAGACTG +
Preference number: 6 (lower is better)
Translates to: CVNCCSRARYSRELL*NRSLEKAMLATRRL
Trigger: CAGTCTGCGTGTTGCTAACATGGCCTTCTCCAACGACCTGTTCAACAAGAGCTCTCTGGAGTACCGAGCTCTGGAGCAACAATTCACACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 90 bp AGCTGTGTGAATTGTTGCTCCAGAGCTCGGTACTCCAGAGAGCTCTaGTTGAACAGGTCGTTGGAGAAGGCCATGTTAGCAACACGCAGA +
Preference number: 6 (lower is better)
Translates to: SCVNCCSRARYSREL*LNRSLEKAMLATRR
Trigger: TCTGCGTGTTGCTAACATGGCCTTCTCCAACGACCTGTTCAACAAGAGCTCTCTGGAGTACCGAGCTCTGGAGCAACAATTCACACAGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS GCA 72 bp AGAGTAGCTGTCTATTTCCAGATGGAGTTGTTGGGCTaGAGCAGAACGAAAATCCTCCAAGACCCCGTGCAC +
Preference number: 6 (lower is better)
Translates to: RVAVYFQMELLG*SRTKILQDPVH
Trigger: GTGCACGGGGTCTTGGAGGATTTTCGTTCTGCTGCAGCCCAACAACTCCATCTGGAAATAGACAGCTACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS GCA 72 bp CCCTGTGTCAGGGATGCGATCCAGAAAGATCCGATATaGTTCCCATACTGCTTCCTGACACACTTTGGTTCC +
Preference number: 6 (lower is better)
Translates to: PCVRDAIQKDPI*FPYCFLTHFGS
Trigger: GGAACCAAAGTGTGTCAGGAAGCAGTATGGGAAGCATATCGGATCTTTCTGGATCGCATCCCTGACACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611179.4
CDS CAA 72 bp ACACGCAGACTGAAGAACACTACCAGCTCTCGGCCCTaGGGGGCAATGGTCATAGAACTAGTGGTGATATAC +
Preference number: 6 (lower is better)
Translates to: TRRLKNTTSSRP*GAMVIELVVIY
Trigger: GTATATCACCACTAGTTCTATGACCATTGCCCCCAAGGGCCGAGAGCTGGTAGTGTTCTTCAGTCTGCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 72 bp TGTTGCTCCAGAGCTCGGTACTCCAGAGAGCTCTTGTaGAACAGGTCGTTGGAGAAGGCCATGTTAGCAACA +
Preference number: 6 (lower is better)
Translates to: CCSRARYSRELL*NRSLEKAMLAT
Trigger: TGTTGCTAACATGGCCTTCTCCAACGACCTGTTCAACAAGAGCTCTCTGGAGTACCGAGCTCTGGAGCAACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 72 bp GCAGAACGAAAATCCTCCAAGACCCCGTGCACAGCCTaGGTGAGGTTATACGGCACTGACTTAGCAAACTTC +
Preference number: 6 (lower is better)
Translates to: AERKSSKTPCTA*VRLYGTDLANF
Trigger: GAAGTTTGCTAAGTCAGTGCCGTATAACCTCACCAAGGCTGTGCACGGGGTCTTGGAGGATTTTCGTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 72 bp ATTGGATCCTGTCCAAGGGCAAGGTTTCAGCTCAGCTaGCCTATAAAATTCAGGCTTCACCTGGGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: IGSCPRARFQLS*PIKFRLHLGWL
Trigger: CAGCCAGCCCAGGTGAAGCCTGAATTTTATAGGCAAGCTGAGCTGAAACCTTGCCCTTGGACAGGATCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369952.3
CDS CAA 90 bp TGGTTCAATGTTGAGAGAGTAGCTGTCTATTTCCAGATGGAGTTGTaGGGCTGCAGCAGAACGAAAATCCTCCAAGACCCCGTGCACAGC +
Preference number: 6 (lower is better)
Translates to: WFNVERVAVYFQMEL*GCSRTKILQDPVHS
Trigger: GCTGTGCACGGGGTCTTGGAGGATTTTCGTTCTGCTGCAGCCCAACAACTCCATCTGGAAATAGACAGCTACTCTCTCAACATTGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 90 bp AGCTGGTTCAATGTTGAGAGAGTAGCTGTCTATTTCCAGATGGAGTaGTTGGGCTGCAGCAGAACGAAAATCCTCCAAGACCCCGTGCAC +
Preference number: 6 (lower is better)
Translates to: SWFNVERVAVYFQME*LGCSRTKILQDPVH
Trigger: GTGCACGGGGTCTTGGAGGATTTTCGTTCTGCTGCAGCCCAACAACTCCATCTGGAAATAGACAGCTACTCTCTCAACATTGAACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS TCA 72 bp CAGGAGTGTCAGACAGATCCATTTCATCTAGGTGTCTaGCCATATCTTCGCCACCTGCACTTGATCGGCTGT +
Preference number: 6 (lower is better)
Translates to: QECQTDPFHLGV*PYLRHLHLIGC
Trigger: ACAGCCGATCAAGTGCAGGTGGCGAAGATATGGTCAGACACCTAGATGAAATGGATCTGTCTGACACTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS GCA 72 bp CCCTGTGTCAGGGATGCGATCCAGAAAGATCCGATATaGTTCCCATACTGCTTCCTGACACACTCTCAATCT +
Preference number: 6 (lower is better)
Translates to: PCVRDAIQKDPI*FPYCFLTHSQS
Trigger: AGATTGAGAGTGTGTCAGGAAGCAGTATGGGAAGCATATCGGATCTTTCTGGATCGCATCCCTGACACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000369963.5
CDS GCA 72 bp TTCTGGTTTACCAGAGAGACGCTGAGCTCCACCCTCTaGTCCTCCAACACAGCGAATTCTGTTTCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: FWFTRETLSSTL*SSNTANSVSLS
Trigger: AGAAAGAGAAACAGAATTCGCTGTGTTGGAGGAGCAGAGGGTGGAGCTCAGCGTCTCTCTGGTAAACCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS GCA 72 bp GATCGTAGATATGGAACCAGCAGCTGTGTGAATTGTTaGTCCAGAGCTCGGTACTCCAGAGAGCTCTTGTTG +
Preference number: 6 (lower is better)
Translates to: DRRYGTSSCVNC*SRARYSRELLL
Trigger: CAACAAGAGCTCTCTGGAGTACCGAGCTCTGGAGCAACAATTCACACAGCTGCTGGTTCCATATCTACGATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 72 bp AATTGTTGCTCCAGAGCTCGGTACTCCAGAGAGCTCTaGTTGAACAGGTCGTTGGAGAAGGCCATGTTAGCA +
Preference number: 6 (lower is better)
Translates to: NCCSRARYSREL*LNRSLEKAMLA
Trigger: TGCTAACATGGCCTTCTCCAACGACCTGTTCAACAAGAGCTCTCTGGAGTACCGAGCTCTGGAGCAACAATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 72 bp GTTGAGAGAGTAGCTGTCTATTTCCAGATGGAGTTGTaGGGCTGCAGCAGAACGAAAATCCTCCAAGACCCC +
Preference number: 6 (lower is better)
Translates to: VERVAVYFQMEL*GCSRTKILQDP
Trigger: GGGGTCTTGGAGGATTTTCGTTCTGCTGCAGCCCAACAACTCCATCTGGAAATAGACAGCTACTCTCTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 90 bp GGGATCTGCTTGATCAGGTGTTGGACAGAAAGTGATACATCTCCTTaGATTGGATCCTGTCCAAGGGCAAGGTTTCAGCTCAGCTTGCCT +
Preference number: 6 (lower is better)
Translates to: GICLIRCWTESDTSP*IGSCPRARFQLSLP
Trigger: AGGCAAGCTGAGCTGAAACCTTGCCCTTGGACAGGATCCAATCAAAGGAGATGTATCACTTTCTGTCCAACACCTGATCAAGCAGATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369952.3
CDS TCA 72 bp TGCAGGGATCTGCTTGATCAGGTGTTGGACAGAAAGTaGTACATCTCCTTTGATTGGATCCTGTCCAAGGGC +
Preference number: 6 (lower is better)
Translates to: CRDLLDQVLDRK*YISFDWILSKG
Trigger: GCCCTTGGACAGGATCCAATCAAAGGAGATGTATCACTTTCTGTCCAACACCTGATCAAGCAGATCCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369952.3
CDS GCA 72 bp CTAGCATTGTCTGGTCAGTGGCCATTGTATCTGTGGTaGCTTGATCAGTCAGAGAGAAGATGCTTGATGCCA +
Preference number: 6 (lower is better)
Translates to: LALSGQWPLYLW*LDQSERRCLMP
Trigger: TGGCATCAAGCATCTTCTCTCTGACTGATCAAGGCACCACAGATACAATGGCCACTGACCAGACAATGCTAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 90 bp GTTGTAGGCATCTTGGTGTCGTTGAGTGTATTATCGAGAATTTCATaGAGGAGGGTGTCATCAGGAGTGAGAGGGAAAGGCCCAAGTGAG +
Preference number: 6 (lower is better)
Translates to: VVGILVSLSVLSRIS*RRVSSGVRGKGPSE
Trigger: CTCACTTGGGCCTTTCCCTCTCACTCCTGATGACACCCTCCTCAATGAAATTCTCGATAATACACTCAACGACACCAAGATGCCTACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 90 bp ATGTTAGCAACACGCAGACTGAAGAACACTACCAGCTCTCGGCCCTaGGGGGCAATGGTCATAGAACTAGTGGTGATATACTGTAAAGCT +
Preference number: 6 (lower is better)
Translates to: MLATRRLKNTTSSRP*GAMVIELVVIYCKA
Trigger: AGCTTTACAGTATATCACCACTAGTTCTATGACCATTGCCCCCAAGGGCCGAGAGCTGGTAGTGTTCTTCAGTCTGCGTGTTGCTAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 90 bp GCTGATCAGCCTTTTGAGGTCTGTAGCTGTGAGATAGATTTCTGGTaGCTTGTCCTCCTCCATGGTTCCATGATAGACTTCCTCACTTTC +
Preference number: 6 (lower is better)
Translates to: ADQPFEVCSCEIDFW*LVLLHGSMIDFLTF
Trigger: GAAAGTGAGGAAGTCTATCATGGAACCATGGAGGAGGACAAGCAACCAGAAATCTATCTCACAGCTACAGACCTCAAAAGGCTGATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS GCA 72 bp GATGCGATCCAGAAAGATCCGATATGCTTCCCATACTaGTTCCTGACACACTTTGGTTCCTTGAACTTGGAG +
Preference number: 6 (lower is better)
Translates to: DAIQKDPICFPY*FLTHFGSLNLE
Trigger: CTCCAAGTTCAAGGAACCAAAGTGTGTCAGGAAGCAGTATGGGAAGCATATCGGATCTTTCTGGATCGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611179.4
CDS CCA 72 bp GTACTAGCATTGTCTGGTCAGTGGCCATTGTATCTGTaGTGCCTTGATCAGTCAGAGAGAAGATGCTTGATG +
Preference number: 6 (lower is better)
Translates to: VLALSGQWPLYL*CLDQSERRCLM
Trigger: CATCAAGCATCTTCTCTCTGACTGATCAAGGCACCACAGATACAATGGCCACTGACCAGACAATGCTAGTAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS TCA 72 bp ATTGTCTGGTCAGTGGCCATTGTATCTGTGGTGCCTTaGTCAGTCAGAGAGAAGATGCTTGATGCCATAAAG +
Preference number: 6 (lower is better)
Translates to: IVWSVAIVSVVP*SVREKMLDAIK
Trigger: CTTTATGGCATCAAGCATCTTCTCTCTGACTGATCAAGGCACCACAGATACAATGGCCACTGACCAGACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CCA 72 bp CACTGTCTCAAGCTGGGGTTCAACAGGAGGAAGTTCTaGACTCAAAGTAGCATCCTCTGTTATAACAGCAAA +
Preference number: 6 (lower is better)
Translates to: HCLKLGFNRRKF*TQSSILCYNSK
Trigger: TTTGCTGTTATAACAGAGGATGCTACTTTGAGTCCAGAACTTCCTCCTGTTGAACCCCAGCTTGAGACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 72 bp ATCTTGGTGTCGTTGAGTGTATTATCGAGAATTTCATaGAGGAGGGTGTCATCAGGAGTGAGAGGGAAAGGC +
Preference number: 6 (lower is better)
Translates to: ILVSLSVLSRIS*RRVSSGVRGKG
Trigger: GCCTTTCCCTCTCACTCCTGATGACACCCTCCTCAATGAAATTCTCGATAATACACTCAACGACACCAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 72 bp CCTTTTGAGGTCTGTAGCTGTGAGATAGATTTCTGGTaGCTTGTCCTCCTCCATGGTTCCATGATAGACTTC +
Preference number: 6 (lower is better)
Translates to: PFEVCSCEIDFW*LVLLHGSMIDF
Trigger: GAAGTCTATCATGGAACCATGGAGGAGGACAAGCAACCAGAAATCTATCTCACAGCTACAGACCTCAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 72 bp AATGTTGAGAGAGTAGCTGTCTATTTCCAGATGGAGTaGTTGGGCTGCAGCAGAACGAAAATCCTCCAAGAC +
Preference number: 6 (lower is better)
Translates to: NVERVAVYFQME*LGCSRTKILQD
Trigger: GTCTTGGAGGATTTTCGTTCTGCTGCAGCCCAACAACTCCATCTGGAAATAGACAGCTACTCTCTCAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS GCA 72 bp GATGCGATCCAGAAAGATCCGATATGCTTCCCATACTaGTTCCTGACACACTCTCAATCTATAATAAGCTTG +
Preference number: 6 (lower is better)
Translates to: DAIQKDPICFPY*FLTHSQSIISL
Trigger: CAAGCTTATTATAGATTGAGAGTGTGTCAGGAAGCAGTATGGGAAGCATATCGGATCTTTCTGGATCGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000369963.5
CDS CAA 90 bp ACAGCGAATTCTGTTTCTCTTTCTGTTGTAGGCATCTTGGTGTCGTaGAGTGTATTATCGAGAATTTCATTGAGGAGGGTGTCATCAGGA +
Preference number: 6 (lower is better)
Translates to: TANSVSLSVVGILVS*SVLSRISLRRVSSG
Trigger: TCCTGATGACACCCTCCTCAATGAAATTCTCGATAATACACTCAACGACACCAAGATGCCTACAACAGAAAGAGAAACAGAATTCGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 72 bp TCTGTTTCTCTTTCTGTTGTAGGCATCTTGGTGTCGTaGAGTGTATTATCGAGAATTTCATTGAGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: SVSLSVVGILVS*SVLSRISLRRV
Trigger: CACCCTCCTCAATGAAATTCTCGATAATACACTCAACGACACCAAGATGCCTACAACAGAAAGAGAAACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 72 bp ACAGCGAATTCTGTTTCTCTTTCTGTTGTAGGCATCTaGGTGTCGTTGAGTGTATTATCGAGAATTTCATTG +
Preference number: 6 (lower is better)
Translates to: TANSVSLSVVGI*VSLSVLSRISL
Trigger: CAATGAAATTCTCGATAATACACTCAACGACACCAAGATGCCTACAACAGAAAGAGAAACAGAATTCGCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4
CDS CAA 72 bp AAGTTAAGTATTTCAAGTTGCTTAAATCCTGTAAGATaGGATCGTAGATATGGAACCAGCAGCTGTGTGAAT +
Preference number: 6 (lower is better)
Translates to: KLSISSCLNPVR*DRRYGTSSCVN
Trigger: ATTCACACAGCTGCTGGTTCCATATCTACGATCCAATCTTACAGGATTTAAGCAACTTGAAATACTTAACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369950.8
ENST00000611179.4