Pregenerated sensors for IMPA1 (Homo sapiens)
Ensembl gene IDs: ENSG00000133731Ensembl transcript IDs: ENST00000256108.10, ENST00000518188.5, ENST00000520065.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | AAACGAACCTACAATAAGTCTAGTAGTCTGTTTACGTaGCAAGGGATAAGGCTGAACAATAAATTAACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: KRTYNKSSSLFT*QGIRLNNKLTL Trigger: AAGGGTTAATTTATTGTTCAGCCTTATCCCTTGGCACGTAAACAGACTACTAGACTTATTGTAGGTTCGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256108.10 |
||
| CDS-3UTR TCA 90 bp | ATTAGAAAGAACCATTCTCACAGTCTCTGGTGTTCTGGAAGAGCCCAACTCAGTGTCCGGCTAGCTCTGTaGACGGTGTTACCGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: IRKNHSHSLWCSGRAQLSVRLAL*TVLPHS Trigger: CGAGTGCGGTAACACCGTTCACAGAGCTAGCCGGAC...ACTGAGTTGGGCTCTTCCAGAACACCAGAGACTGTGAGAATGGTTCTTTCTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518188.5 |
||
| CDS-3UTR CCA 90 bp | ATTAGAAAGAACCATTCTCACAGTCTCTGGTGTTCTGGAAGAGCCCAACTCAGTCAGTCTCTGGTGTTCTaGAAGAGCCCAACTCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IRKNHSHSLWCSGRAQLSQSLVF*KSPTQS Trigger: TGACTGAGTTGGGCTCTTCCAGAACACCAGAGACTG...ACTGAGTTGGGCTCTTCCAGAACACCAGAGACTGTGAGAATGGTTCTTTCTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518188.5 |
||
| CDS-3UTR CCA 90 bp | ATATTAGAAAGAACCATTCTCACAGTCTCTGGTGTTCTGGAAGAGCCCAACTCACATTCTCACAGTCTCTaGTGTTCTGGAAGAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ILERTILTVSGVLEEPNSHSHSL*CSGRAQ Trigger: TTGGGCTCTTCCAGAACACCAGAGACTGTGAGAATG...TGAGTTGGGCTCTTCCAGAACACCAGAGACTGTGAGAATGGTTCTTTCTAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518188.5 |
||
| CDS-3UTR GCA 90 bp | ATATTAGAAAGAACCATTCTCACAGTCTCTGGTGTTCTGGAAGAGCCCAACTCATTCATAATATGCATCTaGTCCGCCAGTTGCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILERTILTVSGVLEEPNSFIICI*SASCHK Trigger: CTTGTGGCAACTGGCGGAGCAGATGCATATTATGAA...TGAGTTGGGCTCTTCCAGAACACCAGAGACTGTGAGAATGGTTCTTTCTAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518188.5 |
||
| CDS-3UTR TCA 90 bp | TTCCATATTAGAAAGAACCATTCTCACAGTCTCTGGTGTTCTGGAAGAGCCCAACAGATTCTTCACCAATaGAACTGTGAGATGGATACT | + |
|
Preference number: 4 (lower is better) Translates to: FHIRKNHSHSLWCSGRAQQILHQ*NCEMDT Trigger: AGTATCCATCTCACAGTTTCATTGGTGAAGAATCTG...TTGGGCTCTTCCAGAACACCAGAGACTGTGAGAATGGTTCTTTCTAATATGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518188.5 |
||
| CDS-3UTR TCA 90 bp | ATATTAGAAAGAACCATTCTCACAGTCTCTGGTGTTCTGGAAGAGCCCAACTCATCACCAATGAAACTGTaGGATGGATACTTTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILERTILTVSGVLEEPNSSPMKL*DGYFSF Trigger: AAAGGAAAAGTATCCATCTCACAGTTTCATTGGTGA...TGAGTTGGGCTCTTCCAGAACACCAGAGACTGTGAGAATGGTTCTTTCTAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518188.5 |
||
| CDS-3UTR CAA 90 bp | ATATTAGAAAGAACCATTCTCACAGTCTCTGGTGTTCTGGAAGAGCCCAACTCATATTTGACAAATATCTaGAGTCGGAGGACGTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: ILERTILTVSGVLEEPNSYLTNI*SRRTSG Trigger: GCCGGACGTCCTCCGACTCAAGATATTTGTCAAATA...TGAGTTGGGCTCTTCCAGAACACCAGAGACTGTGAGAATGGTTCTTTCTAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518188.5 |
||
| CDS-3UTR CAA 90 bp | ATATTAGAAAGAACCATTCTCACAGTCTCTGGTGTTCTGGAAGAGCCCAACTCAATGATCCATGTGGGGTaGTCGGTTAAGATACTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ILERTILTVSGVLEEPNSMIHVG*SVKILF Trigger: AAAAAGTATCTTAACCGACAACCCCACATGGATCAT...TGAGTTGGGCTCTTCCAGAACACCAGAGACTGTGAGAATGGTTCTTTCTAATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518188.5 |
||
| CDS CAA 72 bp | CTAATCAAGAGAAAGAGGTCACCAGAACTGATATCCTaGACTCTCCTCCCATCCAAGTCCAGATCTAAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LIKRKRSPELIS*TLLPSKSRSKN Trigger: GTTCTTAGATCTGGACTTGGATGGGAGGAGAGTCAAGGATATCAGTTCTGGTGACCTCTTTCTCTTGATTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520065.1 |
||