RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ILDR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000143195

Ensembl transcript IDs: ENST00000271417.8, ENST00000414590.1, ENST00000469934.6, ENST00000525740.5, ENST00000526687.1, ENST00000528703.5, ENST00000529071.5, ENST00000529387.5

Found 998 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGGATGTGAGGCCTAGCATCTCCGTGAGGCCTGCCCTGTGTTGGTaGATATGGGCAGCAGCACTCACAGCCGCAGAACTGAGCCCCAGG +
Preference number: 1 (lower is better)
Translates to: GDVRPSISVRPALCW*IWAAALTAAELSPR
Trigger: CCTGGGGCTCAGTTCTGCGGCTGTGAGTGCTGCTGCCCATATTCACCAACACAGGGCAGGCCTCACGGAGATGCTAGGCCTCACATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 90 bp GCCCCAGGAGCAGCCACGCTGAGCTCCCCTGTGAACGTGCTTGGATaGAATAGCTGCCATGCACCAGGTCCATGGCCATTGTCTCCAACT +
Preference number: 1 (lower is better)
Translates to: APGAATLSSPVNVLG*NSCHAPGPWPLSPT
Trigger: AGTTGGAGACAATGGCCATGGACCTGGTGCATGGCAGCTATTCCATCCAAGCACGTTCACAGGGGAGCTCAGCGTGGCTGCTCCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 90 bp GCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATCTTCCAAGGTaGTGGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTG +
Preference number: 1 (lower is better)
Translates to: ACHPLPKQRSANLPR*WPEKVLGLLVLRFV
Trigger: CACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCCATCACCTTGGAAGATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR TCA 90 bp CCAAAGCAACACGGAAGTCCTTTGGTAGGTCAATTCTCCAAGCAATaGCACATACCAGCTCATCCCTCCGACCCTCACCCAGCCACTTTC +
Preference number: 1 (lower is better)
Translates to: PKQHGSPLVGQFSKQ*HIPAHPSDPHPATF
Trigger: GAAAGTGGCTGGGTGAGGGTCGGAGGGATGAGCTGGTATGTGTCATTGCTTGGAGAATTGACCTACCAAAGGACTTCCGTGTTGCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 90 bp TCTTCCAGCCCTTGGAAGTGCCAGCACTGGGTTCAACTGTTCTCCTaGTTTCTCTGGGACTGGCCAAAGCAACACGGAAGTCCTTTGGTA +
Preference number: 1 (lower is better)
Translates to: SSSPWKCQHWVQLFS*FLWDWPKQHGSPLV
Trigger: TACCAAAGGACTTCCGTGTTGCTTTGGCCAGTCCCAGAGAAATCAGGAGAACAGTTGAACCCAGTGCTGGCACTTCCAAGGGCTGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 90 bp AGCAGAGATCAGCAAATCTTCCAAGGTGATGGCCAGAGAAGGTCCTaGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCAT +
Preference number: 1 (lower is better)
Translates to: SRDQQIFQGDGQRRS*ACWFLDLCLVPVVH
Trigger: ATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCCATCACCTTGGAAGATTTGCTGATCTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR CCA 90 bp AATTTGGGCTGGGTTCAGCTAGGCAGTTCTTCTATTGGTATCACCTaGACTCACCCATGTCTGCATCAGCTGGAAGTTGACGGGCTGTCA +
Preference number: 1 (lower is better)
Translates to: NLGWVQLGSSSIGIT*THPCLHQLEVDGLS
Trigger: TGACAGCCCGTCAACTTCCAGCTGATGCAGACATGGGTGAGTCCAGGTGATACCAATAGAAGAACTGCCTAGCTGAACCCAGCCCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 90 bp TTCTGGGAATGGAAATATCTACAACAGCCTCCCTGGGAGTGCTCCTaGCACTCCTTTCTCTCTGCCTGTTTTCCCACTACCACTAGCGTA +
Preference number: 1 (lower is better)
Translates to: FWEWKYLQQPPWECS*HSFLSACFPTTTSV
Trigger: TACGCTAGTGGTAGTGGGAAAACAGGCAGAGAGAAAGGAGTGTCAGGAGCACTCCCAGGGAGGCTGTTGTAGATATTTCCATTCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 90 bp AACATTTCAGTTTTGATGTCACAAGGCACAAAGACAACTGACAGGTaGCCCTCACGAAGCCAACTTCTCACCCTTCTCTGTCCCACCCTC +
Preference number: 1 (lower is better)
Translates to: NISVLMSQGTKTTDR*PSRSQLLTLLCPTL
Trigger: GAGGGTGGGACAGAGAAGGGTGAGAAGTTGGCTTCGTGAGGGCCACCTGTCAGTTGTCTTTGTGCCTTGTGACATCAAAACTGAAATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 90 bp GGAAGGTTAGCAATAGAGTCACTCTCTTGGATGTGTGCCACTAGATaGCGTGTCAGACCAACTCACTCACCTCTAAGCAACTTCCTAGCT +
Preference number: 1 (lower is better)
Translates to: GRLAIESLSWMCATR*RVRPTHSPLSNFLA
Trigger: AGCTAGGAAGTTGCTTAGAGGTGAGTGAGTTGGTCTGACACGCCATCTAGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 90 bp ACACCTCCATCCAATACTGGAAGGTTAGCAATAGAGTCACTCTCTTaGATGTGTGCCACTAGATGGCGTGTCAGACCAACTCACTCACCT +
Preference number: 1 (lower is better)
Translates to: TPPSNTGRLAIESLS*MCATRWRVRPTHSP
Trigger: AGGTGAGTGAGTTGGTCTGACACGCCATCTAGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGATGGAGGTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 90 bp CAGCAACAGTATCTGTCTTCATGGCTTCGCCACATCCATGACATATaGACAAGCATCAAGTCTACGGCTCTTCTCACCAGATGTCTGGCT +
Preference number: 1 (lower is better)
Translates to: QQQYLSSWLRHIHDI*TSIKSTALLTRCLA
Trigger: AGCCAGACATCTGGTGAGAAGAGCCGTAGACTTGATGCTTGTTCATATGTCATGGATGTGGCGAAGCCATGAAGACAGATACTGTTGCTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 90 bp GATGAAGCAGCAACAGTATCTGTCTTCATGGCTTCGCCACATCCATaGCATATGAACAAGCATCAAGTCTACGGCTCTTCTCACCAGATG +
Preference number: 1 (lower is better)
Translates to: DEAATVSVFMASPHP*HMNKHQVYGSSHQM
Trigger: CATCTGGTGAGAAGAGCCGTAGACTTGATGCTTGTTCATATGTCATGGATGTGGCGAAGCCATGAAGACAGATACTGTTGCTGCTTCATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR GCA 90 bp GTGCTAAAGCTCAGGCTGCTGCTTAAAGCATCTCAACACTGCCCTTaGACCACTCTGATGTTAAATGCCCCTTCTTCAAGCTTCATAGAT +
Preference number: 1 (lower is better)
Translates to: VLKLRLLLKASQHCP*TTLMLNAPSSSFID
Trigger: ATCTATGAAGCTTGAAGAAGGGGCATTTAACATCAGAGTGGTGCAAGGGCAGTGTTGAGATGCTTTAAGCAGCAGCCTGAGCTTTAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR GCA 90 bp CAAATAGTGCTAAAGCTCAGGCTGCTGCTTAAAGCATCTCAACACTaGCCTTGCACCACTCTGATGTTAAATGCCCCTTCTTCAAGCTTC +
Preference number: 1 (lower is better)
Translates to: QIVLKLRLLLKASQH*PCTTLMLNAPSSSF
Trigger: GAAGCTTGAAGAAGGGGCATTTAACATCAGAGTGGTGCAAGGGCAGTGTTGAGATGCTTTAAGCAGCAGCCTGAGCTTTAGCACTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 90 bp ACTAATACAGCTGCCAAAGGAATGAAACATAAGAGGCTATCGCCTTaGCCTGAGGGAATGAGAAAAGCTAGGTGCCTAAGTCATACCAGC +
Preference number: 1 (lower is better)
Translates to: TNTAAKGMKHKRLSP*PEGMRKARCLSHTS
Trigger: GCTGGTATGACTTAGGCACCTAGCTTTTCTCATTCCCTCAGGCCAAGGCGATAGCCTCTTATGTTTCATTCCTTTGGCAGCTGTATTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 90 bp TTGTCACTGAACTGTGGTAAAAACAGCCTCCCTGAAGCCTTGGGTTaGAATAATACGTGTGAGGGAATTGGCAACAAAAGGAAGCCGGAA +
Preference number: 1 (lower is better)
Translates to: LSLNCGKNSLPEALG*NNTCEGIGNKRKPE
Trigger: TTCCGGCTTCCTTTTGTTGCCAATTCCCTCACACGTATTATTCCAACCCAAGGCTTCAGGGAGGCTGTTTTTACCACAGTTCAGTGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 90 bp AAGGACATTCACTGGTATATGGAAGGCTCTGGTAGGATTTGTCACTaGACTGTGGTAAAAACAGCCTCCCTGAAGCCTTGGGTTGGAATA +
Preference number: 1 (lower is better)
Translates to: KDIHWYMEGSGRICH*TVVKTASLKPWVGI
Trigger: TATTCCAACCCAAGGCTTCAGGGAGGCTGTTTTTACCACAGTTCAGTGACAAATCCTACCAGAGCCTTCCATATACCAGTGAATGTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 90 bp TCAGGACTAGCTGTTTGGAGTACCCAGAGGTATGACTTAGTGCAATaGTTTCCAAATGCATCTGATCACAGGAGTCTCCTGGAATGCATA +
Preference number: 1 (lower is better)
Translates to: SGLAVWSTQRYDLVQ*FPNASDHRSLLECI
Trigger: TATGCATTCCAGGAGACTCCTGTGATCAGATGCATTTGGAAATCATTGCACTAAGTCATACCTCTGGGTACTCCAAACAGCTAGTCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 90 bp TCTTCTTATAAGGACACTAATTCCATCATAAGAGCTCCACCCTACTaGCCTAATCACCTCCCAAAGGCCTCATGCCCAAATACCATCACA +
Preference number: 1 (lower is better)
Translates to: SSYKDTNSIIRAPPY*PNHLPKASCPNTIT
Trigger: TGTGATGGTATTTGGGCATGAGGCCTTTGGGAGGTGATTAGGTCAGTAGGGTGGAGCTCTTATGATGGAATTAGTGTCCTTATAAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 90 bp GCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATGTCTaGTTTCTCATTATCCAGAGAAATGTTGACAACATCAGACCACAA +
Preference number: 1 (lower is better)
Translates to: ACWFLDLCLVPVVHV*FLIIQRNVDNIRPQ
Trigger: TTGTGGTCTGATGTTGTCAACATTTCTCTGGATAATGAGAAATCAGACATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529387.5
3UTR CCA 90 bp TATTCAGAAATATTTACAGATGTGGTCAGGTGCCTTGGGTTTGGGTaGCAGCCTTTTCTCATCTCCAGTATGCCTAATCCTATGTCAAGT +
Preference number: 1 (lower is better)
Translates to: YSEIFTDVVRCLGFG*QPFLISSMPNPMSS
Trigger: ACTTGACATAGGATTAGGCATACTGGAGATGAGAAAAGGCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 90 bp GAAGATGCCAGATTTTTGCTGTTAAGCAGCTTCTGCCTGGAGTTCTaGATCCAGATGAATCTGTCGTTTCATTCAGAAACTTCTCTGCAA +
Preference number: 1 (lower is better)
Translates to: EDARFLLLSSFCLEF*IQMNLSFHSETSLQ
Trigger: TTGCAGAGAAGTTTCTGAATGAAACGACAGATTCATCTGGATTCAGAACTCCAGGCAGAAGCTGCTTAACAGCAAAAATCTGGCATCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 90 bp CTCTTAATTATGGTGCTGTGGAATTTCTCAAATCTTAACAGAACTTaGAATGTCCTCCCACGAATAGCTTCCTTCCTCCCTTCCCCAAGT +
Preference number: 1 (lower is better)
Translates to: LLIMVLWNFSNLNRT*NVLPRIASFLPSPS
Trigger: ACTTGGGGAAGGGAGGAAGGAAGCTATTCGTGGGAGGACATTTCAAGTTCTGTTAAGATTTGAGAAATTCCACAGCACCATAATTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR GCA 90 bp AAATTTATTTCTCACAGTTCTAGAATCTGGGAAGTCCAAGCTCAGTaGACCAATACATTCAGTTCCTGGCGAAGGTCCTTTTCCTGGTTT +
Preference number: 1 (lower is better)
Translates to: KFISHSSRIWEVQAQ*TNTFSSWRRSFSWF
Trigger: AAACCAGGAAAAGGACCTTCGCCAGGAACTGAATGTATTGGTGCACTGAGCTTGGACTTCCCAGATTCTAGAACTGTGAGAAATAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 90 bp TACCTATGTGAAATTTTGTGGACTATTCAGAAATATTTACAGATGTaGTCAGGTGCCTTGGGTTTGGGTGGCAGCCTTTTCTCATCTCCA +
Preference number: 1 (lower is better)
Translates to: YLCEILWTIQKYLQM*SGALGLGGSLFSSP
Trigger: TGGAGATGAGAAAAGGCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATAGTCCACAAAATTTCACATAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 90 bp AATGCATCTGATCACAGGAGTCTCCTGGAATGCATATTAAAAATATaGATTCTGGCTCTAGACCCACCCAATCAATCTCCAAAACAGGGT +
Preference number: 1 (lower is better)
Translates to: NASDHRSLLECILKI*ILALDPPNQSPKQG
Trigger: ACCCTGTTTTGGAGATTGATTGGGTGGGTCTAGAGCCAGAATTCATATTTTTAATATGCATTCCAGGAGACTCCTGTGATCAGATGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR GCA 90 bp ACAAAGGACAACCTGGTCCCAACTCCCAAGGTTAATTCAGTAGCCTaGTATCTTCTTTGTACTTTTCAGTCTATCTGTAGTTTTGTTGTC +
Preference number: 1 (lower is better)
Translates to: TKDNLVPTPKVNSVA*YLLCTFQSICSFVV
Trigger: GACAACAAAACTACAGATAGACTGAAAAGTACAAAGAAGATAGCAGGCTACTGAATTAACCTTGGGAGTTGGGACCAGGTTGTCCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 90 bp CATTTAGCACACTTACTTCTTCCTTACTCAATCATTCACTCTTCCTaGCTTCCCCAGGGTTGCTGTGTATATATAGAGTCATTATGGAGA +
Preference number: 1 (lower is better)
Translates to: HLAHLLLPYSIIHSS*LPQGCCVYIESLWR
Trigger: TCTCCATAATGACTCTATATATACACAGCAACCCTGGGGAAGCCAGGAAGAGTGAATGATTGAGTAAGGAAGAAGTAAGTGTGCTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 90 bp TCTAAGCAACTTCCTAGCTACTTCTACACCTCATGCCATTTTTGGTaGGTCATCTTAGGCCACCTGATAAGTATTCAGGAAATGCTTATA +
Preference number: 1 (lower is better)
Translates to: SKQLPSYFYTSCHFW*VILGHLISIQEMLI
Trigger: TATAAGCATTTCCTGAATACTTATCAGGTGGCCTAAGATGACTCACCAAAAATGGCATGAGGTGTAGAAGTAGCTAGGAAGTTGCTTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 90 bp TCACTATTCTCACTTCTTCTATTAATAACAACTCTCTTCTCTCTTTaGAGAAATCTTCCTATCCCACTATCCAGTCCATCGCAGTCTCAC +
Preference number: 1 (lower is better)
Translates to: SLFSLLLLITTLFSL*RNLPIPLSSPSQSH
Trigger: GTGAGACTGCGATGGACTGGATAGTGGGATAGGAAGATTTCTCCAAAGAGAGAAGAGAGTTGTTATTAATAGAAGAAGTGAGAATAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 90 bp AAATTTGTCAACAATAGTGGAGGCTATGAGAAACACAAGTTTGGATaGATTAAGAGGTTCAGGGATGAACATTCAGACAAGAACGAGTCA +
Preference number: 1 (lower is better)
Translates to: KFVNNSGGYEKHKFG*IKRFRDEHSDKNES
Trigger: TGACTCGTTCTTGTCTGAATGTTCATCCCTGAACCTCTTAATCCATCCAAACTTGTGTTTCTCATAGCCTCCACTATTGTTGACAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CAA 90 bp GCCAGGGACACCAGCAAGTCTAAAACTCAGCACCAGGGTTATGGCTaGTGTCTTCCAGCCCTTGGAAGTGCCAGCACTGGGTTCAACTGT +
Preference number: 2 (lower is better)
Translates to: ARDTSKSKTQHQGYG*CLPALGSASTGFNC
Trigger: ACAGTTGAACCCAGTGCTGGCACTTCCAAGGGCTGGAAGACACAAGCCATAACCCTGGTGCTGAGTTTTAGACTTGCTGGTGTCCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR TCA 90 bp CAGAAGAATCCAGGGAGGAGACGAAAGGTCCTAATGAAGGCAGTGACACAGAGACCAGCCCCAAAGGATTaGGAGGGACCTCACCAGGAC +
Preference number: 2 (lower is better)
Translates to: QKNPGRRRKVLMKAVTQRPAPKD*EGPHQD
Trigger: GTCCTGGTGAGGTCCCTCTCAATCCTTTGGGGCTGG...TCTCTGTGTCACTGCCTTCATTAGGACCTTTCGTCTCCTCCCTGGATTCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CAA 90 bp ACAGCCTCCCTGAAGCCTTGGGTTGGAATAATACGTGTGAGGGAATaGGCAACAAAAGGAAGCCGGAAAGGCTGGTTGTTCAGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: TASLKPWVGIIRVRE*ATKGSRKGWLFRAL
Trigger: CAGAGCCCTGAACAACCAGCCTTTCCGGCTTCCTTTTGTTGCCAATTCCCTCACACGTATTATTCCAACCCAAGGCTTCAGGGAGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR TCA 90 bp ATAGGGTCTAGCCCCAGTAGGGTGGCTCTGGAGAAGACCAAAAGGATGGTAAAGGCAAATCTTCCAAGGTaGTGGCCAGAGAAGGTCCTG +
Preference number: 2 (lower is better)
Translates to: IGSSPSRVALEKTKRMVKANLPR*WPEKVL
Trigger: CAGGACCTTCTCTGGCCATCACCTTGGAAGATTTGC...CTTTACCATCCTTTTGGTCTTCTCCAGAGCCACCCTACTGGGGCTAGACCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR GCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCGCCTCCCTTAAAGGCTaGCTGCCATCCCTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGASLKG*LPSLAK
Trigger: TTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGC...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR GCA 90 bp CCATCCAATACTGGAAGGTTAGCAATAGAGTCACTCTCTTGGATGTGTGCCACTTCCAGCCCTTGGAAGTaGCAGCACTGGGTTCAACTG +
Preference number: 2 (lower is better)
Translates to: PSNTGRLAIESLSWMCATSSPWK*QHWVQL
Trigger: CAGTTGAACCCAGTGCTGGCACTTCCAAGGGCTGGA...AGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR GCA 90 bp CTGGTTTGCAGACAGATACCTTGCTGTATCCTCACATGGCAGAGAAAGAGAGGACTTGGATGGAATAGCTaGCATGCACCAGGTCCATGG +
Preference number: 2 (lower is better)
Translates to: LVCRQIPCCILTWQRKRGLGWNS*HAPGPW
Trigger: CCATGGACCTGGTGCATGGCAGCTATTCCATCCAAG...TCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CAA 90 bp ATACGTGTGAGGGAATTGGCAACAAAAGGAAGCCGGAAAGGCTGGTaGTTCAGGGCTCTGTGGCTGCAGATAAAGAATCTTTTCGGATGC +
Preference number: 2 (lower is better)
Translates to: IRVRELATKGSRKGW*FRALWLQIKNLFGC
Trigger: GCATCCGAAAAGATTCTTTATCTGCAGCCACAGAGCCCTGAACAACCAGCCTTTCCGGCTTCCTTTTGTTGCCAATTCCCTCACACGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR TCA 90 bp AATCCAGATGAATCTGTCGTTTCATTCAGAAACTTCTCTGCAAGAAGGATTCTCGGCCTAGCATCTCCGTaGGGCCTGCCCTGTGTTGGT +
Preference number: 2 (lower is better)
Translates to: NPDESVVSFRNFSARRILGLASP*GLPCVG
Trigger: ACCAACACAGGGCAGGCCTCACGGAGATGCTAGGCC...GAGAATCCTTCTTGCAGAGAAGTTTCTGAATGAAACGACAGATTCATCTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR TCA 90 bp CAGAAGAATCCAGGGAGGAGACGAAAGGTCCTAATGAAGGCAGTGACACAGAGACCCTTCATCTCCTTCTaGATGTTACAGTCTGTGGAG +
Preference number: 2 (lower is better)
Translates to: QKNPGRRRKVLMKAVTQRPFISF*MLQSVE
Trigger: CTCCACAGACTGTAACATTCAGAAGGAGATGAAGGG...TCTCTGTGTCACTGCCTTCATTAGGACCTTTCGTCTCCTCCCTGGATTCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR GCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCCTGCCTGCCATCCCTTaGCAAAGCAGAGATCAGCAA +
Preference number: 2 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGLPAIP*QSRDQQ
Trigger: TTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAG...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR GCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGCCTCCCTTAAAGGCTaGCTGCCATCCCTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGASLKG*LPSLAK
Trigger: TTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGC...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR GCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGAGAAGGTCCTGGGCCTaGTGGTTCTTAGATTTGTGT +
Preference number: 2 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWRRSWA*WFLDLC
Trigger: ACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCT...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CCA 90 bp CTGGTTTGCAGACAGATACCTTGCTGTATCCTCACATGGCAGAGAAAGAGAGGAAGGTCCTGGGCCTGCTaGTTCTTAGATTTGTGTCTT +
Preference number: 2 (lower is better)
Translates to: LVCRQIPCCILTWQRKRGRSWAC*FLDLCL
Trigger: AAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT...TCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR GCA 90 bp CAGAAGAATCCAGGGAGGAGACGAAAGGTCCTAATGAAGGCAGTGACACAGAGAATTATTTTTGGTCTCTaGAGCTGGTGCTATGAGGCT +
Preference number: 2 (lower is better)
Translates to: QKNPGRRRKVLMKAVTQRIIFGL*SWCYEA
Trigger: AGCCTCATAGCACCAGCTGCAGAGACCAAAAATAAT...TCTCTGTGTCACTGCCTTCATTAGGACCTTTCGTCTCCTCCCTGGATTCTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR TCA 90 bp CTGGTTTGCAGACAGATACCTTGCTGTATCCTCACATGGCAGAGAAAGAGAGGATCATCTTTGTACAGCTaGAGACTAGGGAATGGACTA +
Preference number: 2 (lower is better)
Translates to: LVCRQIPCCILTWQRKRGSSLYS*RLGNGL
Trigger: TAGTCCATTCCCTAGTCTTCAGCTGTACAAAGATGA...TCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR GCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGCCCTTAAAGGCTGCCTaGCATCCCTTGCCAAAGCAG +
Preference number: 2 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWPLKAA*HPLPKQ
Trigger: CTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGG...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR GCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTGCCTCCCTTAAAGGCTaGCTGCCATCCCTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSASLKG*LPSLAK
Trigger: TTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGC...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR GCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGGCCTCCCTTAAAGGCTaGCTGCCATCCCTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWASLKG*LPSLAK
Trigger: TTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGC...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR GCA 90 bp CTGGTTTGCAGACAGATACCTTGCTGTATCCTCACATGGCAGAGAAAGAGAGGATCTCAACACTGCCCTTaGACCACTCTGATGTTAAAT +
Preference number: 2 (lower is better)
Translates to: LVCRQIPCCILTWQRKRGSQHCP*TTLMLN
Trigger: ATTTAACATCAGAGTGGTGCAAGGGCAGTGTTGAGA...TCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR GCA 90 bp CCATCCAATACTGGAAGGTTAGCAATAGAGTCACTCTCTTGGATGTGTGCCACTTGGCTTCCCCAGGGTTaGTGTGTATATATAGAGTCA +
Preference number: 2 (lower is better)
Translates to: PSNTGRLAIESLSWMCATWLPQG*CVYIES
Trigger: TGACTCTATATATACACAGCAACCCTGGGGAAGCCA...AGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAAGGTCCTGGGCCTGCTaGTTCTTAGATTTGTGTCTT +
Preference number: 2 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGRSWAC*FLDLCL
Trigger: AAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CCA 90 bp GAACTGGGATGGCAGAAACAATTAACGGCAAGTGAAGCACAAAACCGGAAAAGAGGCATAGGCAATTTCTaGAGTTTAGCAGTCCAGAGC +
Preference number: 2 (lower is better)
Translates to: ELGWQKQLTASEAQNRKRGIGNF*SLAVQS
Trigger: GCTCTGGACTGCTAAACTCCAGAAATTGCCTATGCC...TCTTTTCCGGTTTTGTGCTTCACTTGCCGTTAATTGTTTCTGCCATCCCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CCA 90 bp ACTATTCAGAAATATTTACAGATGTGGTCAGGTGCCTTGGGTTTGGGTGGCAGCGGTGACAAGGGTAACTaGGCCCTTTTCTTTTGTCAT +
Preference number: 2 (lower is better)
Translates to: TIQKYLQMWSGALGLGGSGDKGN*ALFFCH
Trigger: ATGACAAAAGAAAAGGGCCCAGTTACCCTTGTCACC...GCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CCA 90 bp TTTATTTCTCACAGTTCTAGAATCTGGGAAGTCCAAGCTCAGTGCACCAATACACCAGTAGGGTGGCTCTaGAGAAGACCAAAAGGATGG +
Preference number: 2 (lower is better)
Translates to: FISHSSRIWEVQAQCTNTPVGWL*RRPKGW
Trigger: CCATCCTTTTGGTCTTCTCCAGAGCCACCCTACTGG...TGTATTGGTGCACTGAGCTTGGACTTCCCAGATTCTAGAACTGTGAGAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CAA 90 bp TGGACTATTCAGAAATATTTACAGATGTGGTCAGGTGCCTTGGGTTaGGGTGGCAGCCTTTTCTCATCTCCAGTATGCCTAATCCTATGT +
Preference number: 2 (lower is better)
Translates to: WTIQKYLQMWSGALG*GGSLFSSPVCLILC
Trigger: ACATAGGATTAGGCATACTGGAGATGAGAAAAGGCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR TCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATGCAAATCTTCCAAGGTaGTGGCCAGAGAAGGTCCTG +
Preference number: 2 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNANLPR*WPEKVL
Trigger: CAGGACCTTCTCTGGCCATCACCTTGGAAGATTTGC...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR TCA 90 bp ACTATTCAGAAATATTTACAGATGTGGTCAGGTGCCTTGGGTTTGGGTGGCAGCAAAACCGGAAAAGACTaGGTGAAGTTTGTGGGTGAA +
Preference number: 2 (lower is better)
Translates to: TIQKYLQMWSGALGLGGSKTGKD*VKFVGE
Trigger: TTCACCCACAAACTTCACTCAGTCTTTTCCGGTTTT...GCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR GCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTACCCTTAAAGGCTGCCTaGCATCCCTTGCCAAAGCAG +
Preference number: 2 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLPLKAA*HPLPKQ
Trigger: CTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGG...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR GCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAACCCTTAAAGGCTGCCTaGCATCCCTTGCCAAAGCAG +
Preference number: 2 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKPLKAA*HPLPKQ
Trigger: CTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGG...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR GCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTCCCTTAAAGGCTGCCTaGCATCCCTTGCCAAAGCAG +
Preference number: 2 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSPLKAA*HPLPKQ
Trigger: CTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGG...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGCTCAAACTAGTTAGATaGGCACAGAGGTTTGAAATC +
Preference number: 2 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWLKLVR*AQRFEI
Trigger: GATTTCAAACCTCTGTGCCCATCTAACTAGTTTGAG...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CCA 90 bp CCATCCAATACTGGAAGGTTAGCAATAGAGTCACTCTCTTGGATGTGTGCCACTGCTGTGAAGAGAAACTaGAATCTGGAATACCCAGAT +
Preference number: 2 (lower is better)
Translates to: PSNTGRLAIESLSWMCATAVKRN*NLEYPD
Trigger: ATCTGGGTATTCCAGATTCCAGTTTCTCTTCACAGC...AGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CAA 90 bp ATTTTGTGGACTATTCAGAAATATTTACAGATGTGGTCAGGTGCCTaGGGTTTGGGTGGCAGCCTTTTCTCATCTCCAGTATGCCTAATC +
Preference number: 2 (lower is better)
Translates to: ILWTIQKYLQMWSGA*GLGGSLFSSPVCLI
Trigger: GATTAGGCATACTGGAGATGAGAAAAGGCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATAGTCCACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR TCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGCAAATCTTCCAAGGTaGTGGCCAGAGAAGGTCCTG +
Preference number: 2 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIANLPR*WPEKVL
Trigger: CAGGACCTTCTCTGGCCATCACCTTGGAAGATTTGC...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR TCA 90 bp ACTATTCAGAAATATTTACAGATGTGGTCAGGTGCCTTGGGTTTGGGTGGCAGCGAAAGCCTGGAAGTCTaGATGATTTATCCAGTTCTA +
Preference number: 2 (lower is better)
Translates to: TIQKYLQMWSGALGLGGSESLEV*MIYPVL
Trigger: TAGAACTGGATAAATCATTCAGACTTCCAGGCTTTC...GCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR GCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAACTGCCTGCCATCCCTTaGCAAAGCAGAGATCAGCAA +
Preference number: 2 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKLPAIP*QSRDQQ
Trigger: TTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAG...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR GCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATCTGCCTGCCATCCCTTaGCAAAGCAGAGATCAGCAA +
Preference number: 2 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNLPAIP*QSRDQQ
Trigger: TTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAG...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR GCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTCCCTTAAAGGCTGCCTaGCATCCCTTGCCAAAGCAG +
Preference number: 2 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCPLKAA*HPLPKQ
Trigger: CTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGG...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR GCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCGCCTCCCTTAAAGGCTaGCTGCCATCCCTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFASLKG*LPSLAK
Trigger: TTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGC...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR GCA 90 bp CCATCCAATACTGGAAGGTTAGCAATAGAGTCACTCTCTTGGATGTGTGCCACTGTTCTCACACATTCTTaGTTTCTTGGTAAGCTTCTC +
Preference number: 2 (lower is better)
Translates to: PSNTGRLAIESLSWMCATVLTHS*FLGKLL
Trigger: GAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAAC...AGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCGGCCAGAGAAGGTCCTaGGCCTGCTGGTTCTTAGAT +
Preference number: 2 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFGQRRS*ACWFLD
Trigger: ATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CCA 90 bp AGGAGAAGAAACAAAAGGACACATAGAGGAAAGTCAGGGGTGCTGAGGACAAGATGGATACTAGAGGAATaGTACTTTGAGAATAGGGTC +
Preference number: 2 (lower is better)
Translates to: RRRNKRTHRGKSGVLRTRWILEE*YFENRV
Trigger: GACCCTATTCTCAAAGTACCATTCCTCTAGTATCCA...TCTTGTCCTCAGCACCCCTGACTTTCCTCTATGTGTCCTTTTGTTTCTTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CCA 90 bp AATCCAGATGAATCTGTCGTTTCATTCAGAAACTTCTCTGCAAGAAGGATTCTCGTGAACGTGCTTGGATaGAATAGCTGCCATGCACCA +
Preference number: 2 (lower is better)
Translates to: NPDESVVSFRNFSARRILVNVLG*NSCHAP
Trigger: TGGTGCATGGCAGCTATTCCATCCAAGCACGTTCAC...GAGAATCCTTCTTGCAGAGAAGTTTCTGAATGAAACGACAGATTCATCTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR TCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTATGGGCACAGAGGTTTaGAATCAGCCTCCCTTAAAG +
Preference number: 2 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSMGTEV*NQPPLK
Trigger: CTTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCAT...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR TCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATATGGGCACAGAGGTTTaGAATCAGCCTCCCTTAAAG +
Preference number: 2 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNMGTEV*NQPPLK
Trigger: CTTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCAT...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR TCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGATGGGCACAGAGGTTTaGAATCAGCCTCCCTTAAAG +
Preference number: 2 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWMGTEV*NQPPLK
Trigger: CTTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCAT...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR TCA 90 bp AATCCAGATGAATCTGTCGTTTCATTCAGAAACTTCTCTGCAAGAAGGATTCTCGTGAAGTCATTTCTGTaGTTGTCCCAGAGGTCACTG +
Preference number: 2 (lower is better)
Translates to: NPDESVVSFRNFSARRILVKSFL*LSQRSL
Trigger: CAGTGACCTCTGGGACAATCACAGAAATGACTTCAC...GAGAATCCTTCTTGCAGAGAAGTTTCTGAATGAAACGACAGATTCATCTGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR TCA 90 bp TTTATTTCTCACAGTTCTAGAATCTGGGAAGTCCAAGCTCAGTGCACCAATACAAAACGAAACTCTCCTTaGGTGAAGCTACAACTCCCT +
Preference number: 2 (lower is better)
Translates to: FISHSSRIWEVQAQCTNTKRNSP*VKLQLP
Trigger: AGGGAGTTGTAGCTTCACTCAAGGAGAGTTTCGTTT...TGTATTGGTGCACTGAGCTTGGACTTCCCAGATTCTAGAACTGTGAGAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR TCA 90 bp CCATCCAATACTGGAAGGTTAGCAATAGAGTCACTCTCTTGGATGTGTGCCACTCAAACATTTCAGTTTTaGTGTCACAAGGCACAAAGA +
Preference number: 2 (lower is better)
Translates to: PSNTGRLAIESLSWMCATQTFQF*CHKAQR
Trigger: TCTTTGTGCCTTGTGACATCAAAACTGAAATGTTTG...AGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR GCA 90 bp CTGGTTTGCAGACAGATACCTTGCTGTATCCTCACATGGCAGAGAAAGAGAGGAAATATTCTCCAAAATTaGCTGAGCAAGTTGAAATCC +
Preference number: 2 (lower is better)
Translates to: LVCRQIPCCILTWQRKRGNILQN*LSKLKS
Trigger: GGATTTCAACTTGCTCAGGCAATTTTGGAGAATATT...TCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR GCA 90 bp AATCCAGATGAATCTGTCGTTTCATTCAGAAACTTCTCTGCAAGAAGGATTCTCAGACCAAAGTGGGAGTaGTATTGGCCAGTCATCCTT +
Preference number: 2 (lower is better)
Translates to: NPDESVVSFRNFSARRILRPKWE*YWPVIL
Trigger: AAGGATGACTGGCCAATAGCACTCCCACTTTGGTCT...GAGAATCCTTCTTGCAGAGAAGTTTCTGAATGAAACGACAGATTCATCTGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR GCA 90 bp ATTGATGTAAAAACACAAGTAGGTGTGGATGATGGACAGGGAATCTTAAATCTTGGGCCCGGCCTTCCTTaGCTCTTGAATGAAATCTAC +
Preference number: 2 (lower is better)
Translates to: IDVKTQVGVDDGQGILNLGPGLP*LLNEIY
Trigger: GTAGATTTCATTCAAGAGGCAAGGAAGGCCGGGCCC...AAGATTTAAGATTCCCTGTCCATCATCCACACCTACTTGTGTTTTTACATCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CCA 90 bp CTGGTTTGCAGACAGATACCTTGCTGTATCCTCACATGGCAGAGAAAGAGAGGAGACAGTCAGAAGGCCTaGCTTTATAATTTTAAAAAC +
Preference number: 2 (lower is better)
Translates to: LVCRQIPCCILTWQRKRGDSQKA*LYNFKN
Trigger: GTTTTTAAAATTATAAAGCCAGGCCTTCTGACTGTC...TCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CCA 90 bp CTGGTTTGCAGACAGATACCTTGCTGTATCCTCACATGGCAGAGAAAGAGAGGAATTTTTACCTTTTTGTaGAGGATGGGATCTCACTAT +
Preference number: 2 (lower is better)
Translates to: LVCRQIPCCILTWQRKRGIFTFL*RMGSHY
Trigger: ATAGTGAGATCCCATCCTCCACAAAAAGGTAAAAAT...TCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR TCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATCCCGTAGTCCATGTCTaGTTTCTCATTATCCAGAGA +
Preference number: 2 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNPVVHV*FLIIQR
Trigger: TCTCTGGATAATGAGAAATCAGACATGGACTACGGG...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR TCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTAATGGGCACAGAGGTTTaGAATCAGCCTCCCTTAAAG +
Preference number: 2 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLMGTEV*NQPPLK
Trigger: CTTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCAT...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR TCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAATGGGCACAGAGGTTTaGAATCAGCCTCCCTTAAAG +
Preference number: 2 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKMGTEV*NQPPLK
Trigger: CTTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCAT...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR TCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATATGGGCACAGAGGTTTaGAATCAGCCTCCCTTAAAG +
Preference number: 2 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNMGTEV*NQPPLK
Trigger: CTTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCAT...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR TCA 90 bp AATCCAGATGAATCTGTCGTTTCATTCAGAAACTTCTCTGCAAGAAGGATTCTCTGGTGCTTAGTTGGATaGAGCAGCAACAGTATCTGT +
Preference number: 2 (lower is better)
Translates to: NPDESVVSFRNFSARRILWCLVG*SSNSIC
Trigger: ACAGATACTGTTGCTGCTTCATCCAACTAAGCACCA...GAGAATCCTTCTTGCAGAGAAGTTTCTGAATGAAACGACAGATTCATCTGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR TCA 90 bp ATAAATTCATATGTAGCTTTTCCCTTAAGTAATGTGAGGCACACCTCCATCCAACTTGAGCTAGGAGTTTaGGACTGCAGTGAGCTGATA +
Preference number: 2 (lower is better)
Translates to: INSYVAFPLSNVRHTSIQLELGV*DCSELI
Trigger: TATCAGCTCACTGCAGTCTCAAACTCCTAGCTCAAG...TTGGATGGAGGTGTGCCTCACATTACTTAAGGGAAAAGCTACATATGAATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR TCA 90 bp ATAAATTCATATGTAGCTTTTCCCTTAAGTAATGTGAGGCACACCTCCATCCAATCATGCCATTTTTGGTaGGTCATCTTAGGCCACCTG +
Preference number: 2 (lower is better)
Translates to: INSYVAFPLSNVRHTSIQSCHFW*VILGHL
Trigger: CAGGTGGCCTAAGATGACTCACCAAAAATGGCATGA...TTGGATGGAGGTGTGCCTCACATTACTTAAGGGAAAAGCTACATATGAATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR GCA 90 bp CCATCCAATACTGGAAGGTTAGCAATAGAGTCACTCTCTTGGATGTGTGCCACTCAAAAACAGATTTTCTaGTTGACAAGGCCACTAAAA +
Preference number: 2 (lower is better)
Translates to: PSNTGRLAIESLSWMCATQKQIF*LTRPLK
Trigger: TTTTAGTGGCCTTGTCAAGCAGAAAATCTGTTTTTG...AGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAAGGTCCTGGGCCTGCTaGTTCTTAGATTTGTGTCTT +
Preference number: 2 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKRSWAC*FLDLCL
Trigger: AAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CCA 90 bp TTTATTTCTCACAGTTCTAGAATCTGGGAAGTCCAAGCTCAGTGCACCAATACAGAATGTTACAGTCTGTaGAGAGCAGTAAGAGTGACA +
Preference number: 2 (lower is better)
Translates to: FISHSSRIWEVQAQCTNTECYSL*RAVRVT
Trigger: TGTCACTCTTACTGCTCTCCACAGACTGTAACATTC...TGTATTGGTGCACTGAGCTTGGACTTCCCAGATTCTAGAACTGTGAGAAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CCA 90 bp TTTATTTCTCACAGTTCTAGAATCTGGGAAGTCCAAGCTCAGTGCACCAATACACTAGCTTTGCTCTACTaGACATTAACGTCTCAGAGA +
Preference number: 2 (lower is better)
Translates to: FISHSSRIWEVQAQCTNTLALLY*TLTSQR
Trigger: TCTCTGAGACGTTAATGTCCAGTAGAGCAAAGCTAG...TGTATTGGTGCACTGAGCTTGGACTTCCCAGATTCTAGAACTGTGAGAAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR TCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTCCCGTAGTCCATGTCTaGTTTCTCATTATCCAGAGA +
Preference number: 2 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSPVVHV*FLIIQR
Trigger: TCTCTGGATAATGAGAAATCAGACATGGACTACGGG...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR TCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCATGGGCACAGAGGTTTaGAATCAGCCTCCCTTAAAG +
Preference number: 2 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFMGTEV*NQPPLK
Trigger: CTTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCAT...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR GCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTAGAAGGTCCTGGGCCTaGTGGTTCTTAGATTTGTGT +
Preference number: 2 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCRRSWA*WFLDLC
Trigger: ACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCT...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTAGGTCCTGGGCCTGCTaGTTCTTAGATTTGTGTCTT +
Preference number: 2 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCRSWAC*FLDLCL
Trigger: AAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR CAA 90 bp TATGTAAAGTTAAAGCCTCTTGCCCTCCCCATCTTAAGATTTTGTTaGCAGTCTACAGGTTGCATTAGAAAGAAATGCACAATGCGTGTA +
Preference number: 2 (lower is better)
Translates to: YVKLKPLALPILRFC*QSTGCIRKKCTMRV
Trigger: TACACGCATTGTGCATTTCTTTCTAATGCAACCTGTAGACTGCAAACAAAATCTTAAGATGGGGAGGGCAAGAGGCTTTAACTTTACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CAA 90 bp ATCACTATTCTCACTTCTTCTATTAATAACAACTCTCTTCTCTCTTaGGAGAAATCTTCCTATCCCACTATCCAGTCCATCGCAGTCTCA +
Preference number: 2 (lower is better)
Translates to: ITILTSSINNNSLLS*EKSSYPTIQSIAVS
Trigger: TGAGACTGCGATGGACTGGATAGTGGGATAGGAAGATTTCTCCAAAGAGAGAAGAGAGTTGTTATTAATAGAAGAAGTGAGAATAGTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR TCA 90 bp AATCCAGATGAATCTGTCGTTTCATTCAGAAACTTCTCTGCAAGAAGGATTCTCAGTGAAGTTTGTGGGTaGAATGGTCCACATTCAAAA +
Preference number: 2 (lower is better)
Translates to: NPDESVVSFRNFSARRILSEVCG*NGPHSK
Trigger: TTTTGAATGTGGACCATTTCACCCACAAACTTCACT...GAGAATCCTTCTTGCAGAGAAGTTTCTGAATGAAACGACAGATTCATCTGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR GCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATGTTCTCACACATTCTTaGTTTCTTGGTAAGCTTCTC +
Preference number: 2 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNVLTHS*FLGKLL
Trigger: GAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAAC...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATCTCAAACTAGTTAGATaGGCACAGAGGTTTGAAATC +
Preference number: 2 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNLKLVR*AQRFEI
Trigger: GATTTCAAACCTCTGTGCCCATCTAACTAGTTTGAG...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR CAA 90 bp AAGGAAATACCACTTAGACAGCTTTTCAAAAAGGTATACTCGCTTTaGCTTTGTCCTAGCCACTTAAGAATTGTCATTCAGAACAGCAGT +
Preference number: 2 (lower is better)
Translates to: KEIPLRQLFKKVYSL*LCPSHLRIVIQNSS
Trigger: ACTGCTGTTCTGAATGACAATTCTTAAGTGGCTAGGACAAAGCAAAAGCGAGTATACCTTTTTGAAAAGCTGTCTAAGTGGTATTTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CAA 90 bp GATAAAAATTTGTCAACAATAGTGGAGGCTATGAGAAACACAAGTTaGGATGGATTAAGAGGTTCAGGGATGAACATTCAGACAAGAACG +
Preference number: 2 (lower is better)
Translates to: DKNLSTIVEAMRNTS*DGLRGSGMNIQTRT
Trigger: CGTTCTTGTCTGAATGTTCATCCCTGAACCTCTTAATCCATCCAAACTTGTGTTTCTCATAGCCTCCACTATTGTTGACAAATTTTTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR TCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATGATAAACGCTATAGTTaGGAAACTCTGTATGTAGGA +
Preference number: 2 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNDKRYS*ETLYVG
Trigger: TCCTACATACAGAGTTTCTCAACTATAGCGTTTATC...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR GCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCGTTCTCACACATTCTTaGTTTCTTGGTAAGCTTCTC +
Preference number: 2 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGVLTHS*FLGKLL
Trigger: GAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAAC...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTCTCAAACTAGTTAGATaGGCACAGAGGTTTGAAATC +
Preference number: 2 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSLKLVR*AQRFEI
Trigger: GATTTCAAACCTCTGTGCCCATCTAACTAGTTTGAG...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAACTCAAACTAGTTAGATaGGCACAGAGGTTTGAAATC +
Preference number: 2 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKLKLVR*AQRFEI
Trigger: GATTTCAAACCTCTGTGCCCATCTAACTAGTTTGAG...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCCTCAAACTAGTTAGATaGGCACAGAGGTTTGAAATC +
Preference number: 2 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGLKLVR*AQRFEI
Trigger: GATTTCAAACCTCTGTGCCCATCTAACTAGTTTGAG...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATCTCAAACTAGTTAGATaGGCACAGAGGTTTGAAATC +
Preference number: 2 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNLKLVR*AQRFEI
Trigger: GATTTCAAACCTCTGTGCCCATCTAACTAGTTTGAG...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR TCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATGATAAACGCTATAGTTaGGAAACTCTGTATGTAGGA +
Preference number: 2 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNDKRYS*ETLYVG
Trigger: TCCTACATACAGAGTTTCTCAACTATAGCGTTTATC...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR TCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGATAAACGCTATAGTTaGGAAACTCTGTATGTAGGA +
Preference number: 2 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIDKRYS*ETLYVG
Trigger: TCCTACATACAGAGTTTCTCAACTATAGCGTTTATC...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR TCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTGATAAACGCTATAGTTaGGAAACTCTGTATGTAGGA +
Preference number: 2 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSDKRYS*ETLYVG
Trigger: TCCTACATACAGAGTTTCTCAACTATAGCGTTTATC...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR TCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCGATAAACGCTATAGTTaGGAAACTCTGTATGTAGGA +
Preference number: 2 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFDKRYS*ETLYVG
Trigger: TCCTACATACAGAGTTTCTCAACTATAGCGTTTATC...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CCA 90 bp ATTGATGTAAAAACACAAGTAGGTGTGGATGATGGACAGGGAATCTTAAATCTTAAACACAAGTTTGGATaGATTAAGAGGTTCAGGGAT +
Preference number: 2 (lower is better)
Translates to: IDVKTQVGVDDGQGILNLKHKFG*IKRFRD
Trigger: ATCCCTGAACCTCTTAATCCATCCAAACTTGTGTTT...AAGATTTAAGATTCCCTGTCCATCATCCACACCTACTTGTGTTTTTACATCAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 72 bp GCAGCCACGCTGAGCTCCCCTGTGAACGTGCTTGGATaGAATAGCTGCCATGCACCAGGTCCATGGCCATTG +
Preference number: 3 (lower is better)
Translates to: AATLSSPVNVLG*NSCHAPGPWPL
Trigger: CAATGGCCATGGACCTGGTGCATGGCAGCTATTCCATCCAAGCACGTTCACAGGGGAGCTCAGCGTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 72 bp ACTCTGGTGAGCCCATCCAGGTCACAGCCAGACTTCTaGGTGACTCACCACAGCCAGCCCCAAAGGATTGAG +
Preference number: 3 (lower is better)
Translates to: TLVSPSRSQPDF*VTHHSQPQRIE
Trigger: CTCAATCCTTTGGGGCTGGCTGTGGTGAGTCACTCAGAAGTCTGGCTGTGACCTGGATGGGCTCACCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR GCA 72 bp AGCACAGCAGCTTATGCATCATCCCCCTGGGACCCCTaGTGCTCACCCTTTCCCGATCCTAATTCACCTCTT +
Preference number: 3 (lower is better)
Translates to: STAAYASSPWDP*CSPFPDPNSPL
Trigger: AAGAGGTGAATTAGGATCGGGAAAGGGTGAGCAGCAGGGGTCCCAGGGGGATGATGCATAAGCTGCTGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR GCA 72 bp ATCTTCCAAGGTGATGGCCAGAGAAGGTCCTGGGCCTaGTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTC +
Preference number: 3 (lower is better)
Translates to: IFQGDGQRRSWA*WFLDLCLVPVV
Trigger: GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCCATCACCTTGGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR CCA 72 bp TTCCAAGGTGATGGCCAGAGAAGGTCCTGGGCCTGCTaGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCAT +
Preference number: 3 (lower is better)
Translates to: FQGDGQRRSWAC*FLDLCLVPVVH
Trigger: ATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCCATCACCTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR CCA 72 bp CAGCAAATCTTCCAAGGTGATGGCCAGAGAAGGTCCTaGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCC +
Preference number: 3 (lower is better)
Translates to: QQIFQGDGQRRS*ACWFLDLCLVP
Trigger: GGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCCATCACCTTGGAAGATTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CAA 90 bp CAAGCACAGCAGCTTATGCATCATCCCCCTGGGACCCCTGCTGCTCACCCTTTCAACTCTCTTTCAGAATaGCAAATGGAGTCCTGGTTC +
Preference number: 3 (lower is better)
Translates to: QAQQLMHHPPGTPAAHPFNSLSE*QMESWF
Trigger: GAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTT...GAAAGGGTGAGCAGCAGGGGTCCCAGGGGGATGATGCATAAGCTGCTGTGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR GCA 72 bp CTATCGCCTTGGCCTGAGGGAATGAGAAAAGCTAGGTaGCTAAGTCATACCAGCAACAAAAAGAGGCTGGGA +
Preference number: 3 (lower is better)
Translates to: LSPWPEGMRKAR*LSHTSNKKRLG
Trigger: TCCCAGCCTCTTTTTGTTGCTGGTATGACTTAGGCACCTAGCTTTTCTCATTCCCTCAGGCCAAGGCGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 72 bp GTTTTGATGTCACAAGGCACAAAGACAACTGACAGGTaGCCCTCACGAAGCCAACTTCTCACCCTTCTCTGT +
Preference number: 3 (lower is better)
Translates to: VLMSQGTKTTDR*PSRSQLLTLLC
Trigger: ACAGAGAAGGGTGAGAAGTTGGCTTCGTGAGGGCCACCTGTCAGTTGTCTTTGTGCCTTGTGACATCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 72 bp GCAATAGAGTCACTCTCTTGGATGTGTGCCACTAGATaGCGTGTCAGACCAACTCACTCACCTCTAAGCAAC +
Preference number: 3 (lower is better)
Translates to: AIESLSWMCATR*RVRPTHSPLSN
Trigger: GTTGCTTAGAGGTGAGTGAGTTGGTCTGACACGCCATCTAGTGGCACACATCCAAGAGAGTGACTCTATTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CAA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGGATGGGCACAGAGGTTaGAAATCAGCCTCCCTTAAA +
Preference number: 3 (lower is better)
Translates to: LSFRIANGVLVLLREEAGDGHRG*KSASLK
Trigger: TTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCATC...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR TCA 72 bp CATTTCAGTTTTGATGTCACAAGGCACAAAGACAACTaGCAGGTGGCCCTCACGAAGCCAACTTCTCACCCT +
Preference number: 3 (lower is better)
Translates to: HFSFDVTRHKDN*QVALTKPTSHP
Trigger: AGGGTGAGAAGTTGGCTTCGTGAGGGCCACCTGTCAGTTGTCTTTGTGCCTTGTGACATCAAAACTGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 72 bp CACTGGTATATGGAAGGCTCTGGTAGGATTTGTCACTaGACTGTGGTAAAAACAGCCTCCCTGAAGCCTTGG +
Preference number: 3 (lower is better)
Translates to: HWYMEGSGRICH*TVVKTASLKPW
Trigger: CCAAGGCTTCAGGGAGGCTGTTTTTACCACAGTTCAGTGACAAATCCTACCAGAGCCTTCCATATACCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR GCA 72 bp CCATCGCAGTCTCACCTTCCTGGTCATAAACAGACTTaGCACATCTCTGGCCACATGATTAGCTCAGATATG +
Preference number: 3 (lower is better)
Translates to: PSQSHLPGHKQT*HISGHMISSDM
Trigger: CATATCTGAGCTAATCATGTGGCCAGAGATGTGGCAAGTCTGTTTATGACCAGGAAGGTGAGACTGCGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR GCA 72 bp GCGAAGGTCCTTTTCCTGGTTTGCAGACAGATACCTTaGTGTATCCTCACATGGCAGAGAAAGAGAGGAAGT +
Preference number: 3 (lower is better)
Translates to: AKVLFLVCRQIP*CILTWQRKRGS
Trigger: ACTTCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAGGAAAAGGACCTTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 72 bp CTTCTCACGCCTCGAGTAGGAATCAGAAATTTGGGCTaGGTTCAGCTAGGCAGTTCTTCTATTGGTATCACC +
Preference number: 3 (lower is better)
Translates to: LLTPRVGIRNLG*VQLGSSSIGIT
Trigger: GGTGATACCAATAGAAGAACTGCCTAGCTGAACCCAGCCCAAATTTCTGATTCCTACTCGAGGCGTGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 72 bp GCTGCCAAAGGAATGAAACATAAGAGGCTATCGCCTTaGCCTGAGGGAATGAGAAAAGCTAGGTGCCTAAGT +
Preference number: 3 (lower is better)
Translates to: AAKGMKHKRLSP*PEGMRKARCLS
Trigger: ACTTAGGCACCTAGCTTTTCTCATTCCCTCAGGCCAAGGCGATAGCCTCTTATGTTTCATTCCTTTGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CAA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGTGCTGGTTCTTAGATTaGTGTCTTGTCCCCGTAGTC +
Preference number: 3 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWCWFLD*CLVPVV
Trigger: GACTACGGGGACAAGACACAAATCTAAGAACCAGCA...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CAA 90 bp CAGAAGAATCCAGGGAGGAGACGAAAGGTCCTAATGAAGGCAGTGACACAGAGAGCTGGGAGGGTGGGGTaGTATATTAATGTCCATTAT +
Preference number: 3 (lower is better)
Translates to: QKNPGRRRKVLMKAVTQRAGRVG*YINVHY
Trigger: ATAATGGACATTAATATACAACCCCACCCTCCCAGC...TCTCTGTGTCACTGCCTTCATTAGGACCTTTCGTCTCCTCCCTGGATTCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CAA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGCTGGTTCTTAGATTaGTGTCTTGTCCCCGTAGTC +
Preference number: 3 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGCWFLD*CLVPVV
Trigger: GACTACGGGGACAAGACACAAATCTAAGAACCAGCA...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR GCA 72 bp TCTCACAGTTCTAGAATCTGGGAAGTCCAAGCTCAGTaGACCAATACATTCAGTTCCTGGCGAAGGTCCTTT +
Preference number: 3 (lower is better)
Translates to: SHSSRIWEVQAQ*TNTFSSWRRSF
Trigger: AAAGGACCTTCGCCAGGAACTGAATGTATTGGTGCACTGAGCTTGGACTTCCCAGATTCTAGAACTGTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 72 bp TCCAATACTGGAAGGTTAGCAATAGAGTCACTCTCTTaGATGTGTGCCACTAGATGGCGTGTCAGACCAACT +
Preference number: 3 (lower is better)
Translates to: SNTGRLAIESLS*MCATRWRVRPT
Trigger: AGTTGGTCTGACACGCCATCTAGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CAA 90 bp CCATCCAATACTGGAAGGTTAGCAATAGAGTCACTCTCTTGGATGTGTGCCACTAAAACGAAACTCTCCTaGAGTGAAGCTACAACTCCC +
Preference number: 3 (lower is better)
Translates to: PSNTGRLAIESLSWMCATKTKLS*SEATTP
Trigger: GGGAGTTGTAGCTTCACTCAAGGAGAGTTTCGTTTT...AGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 72 bp TGGGTGAGGGGCGGTGGTAAATTACAACAGTATCTGTaGCTTCAGCTTCTCTCAAAGGCAAGATCTAATCAG +
Preference number: 3 (lower is better)
Translates to: WVRGGGKLQQYL*LQLLSKARSNQ
Trigger: CTGATTAGATCTTGCCTTTGAGAGAAGCTGAAGTCACAGATACTGTTGTAATTTACCACCGCCCCTCACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 72 bp GCTGTTTGGAGTACCCAGAGGTATGACTTAGTGCAATaGTTTCCAAATGCATCTGATCACAGGAGTCTCCTG +
Preference number: 3 (lower is better)
Translates to: AVWSTQRYDLVQ*FPNASDHRSLL
Trigger: CAGGAGACTCCTGTGATCAGATGCATTTGGAAATCATTGCACTAAGTCATACCTCTGGGTACTCCAAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 72 bp TATCTGTCTTCATGGCTTCGCCACATCCATGACATATaGACAAGCATCAAGTCTACGGCTCTTCTCACCAGA +
Preference number: 3 (lower is better)
Translates to: YLSSWLRHIHDI*TSIKSTALLTR
Trigger: TCTGGTGAGAAGAGCCGTAGACTTGATGCTTGTTCATATGTCATGGATGTGGCGAAGCCATGAAGACAGATA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 72 bp GCAACAGTATCTGTCTTCATGGCTTCGCCACATCCATaGCATATGAACAAGCATCAAGTCTACGGCTCTTCT +
Preference number: 3 (lower is better)
Translates to: ATVSVFMASPHP*HMNKHQVYGSS
Trigger: AGAAGAGCCGTAGACTTGATGCTTGTTCATATGTCATGGATGTGGCGAAGCCATGAAGACAGATACTGTTGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 72 bp CCCTTAAGTAATGTGAGGCACACCTCCATCCAATACTaGAAGGTTAGCAATAGAGTCACTCTCTTGGATGTG +
Preference number: 3 (lower is better)
Translates to: PLSNVRHTSIQY*KVSNRVTLLDV
Trigger: CACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGATGGAGGTGTGCCTCACATTACTTAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 72 bp AACTGTGGTAAAAACAGCCTCCCTGAAGCCTTGGGTTaGAATAATACGTGTGAGGGAATTGGCAACAAAAGG +
Preference number: 3 (lower is better)
Translates to: NCGKNSLPEALG*NNTCEGIGNKR
Trigger: CCTTTTGTTGCCAATTCCCTCACACGTATTATTCCAACCCAAGGCTTCAGGGAGGCTGTTTTTACCACAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 72 bp ACCAATACATTCAGTTCCTGGCGAAGGTCCTTTTCCTaGTTTGCAGACAGATACCTTGCTGTATCCTCACAT +
Preference number: 3 (lower is better)
Translates to: TNTFSSWRRSFS*FADRYLAVSSH
Trigger: ATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAGGAAAAGGACCTTCGCCAGGAACTGAATGTATTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CAA 90 bp CCATCCAATACTGGAAGGTTAGCAATAGAGTCACTCTCTTGGATGTGTGCCACTTTTTCAAGTCTCTGCTaGTGTCACATTTGTTGGGCT +
Preference number: 3 (lower is better)
Translates to: PSNTGRLAIESLSWMCATFSSLC*CHICWA
Trigger: AGCCCAACAAATGTGACACAAGCAGAGACTTGAAAA...AGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 72 bp CTATTCAGAAATATTTACAGATGTGGTCAGGTGCCTTaGGTTTGGGTGGCAGCCTTTTCTCATCTCCAGTAT +
Preference number: 3 (lower is better)
Translates to: LFRNIYRCGQVP*VWVAAFSHLQY
Trigger: ATACTGGAGATGAGAAAAGGCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 72 bp CCATCTCTACAAACAAACAAAATTTGCTGGACGTGGTaGCATATATCTGTAGTCCTACCTACTTGGGAGGCT +
Preference number: 3 (lower is better)
Translates to: PSLQTNKICWTW*HISVVLPTWEA
Trigger: AGCCTCCCAAGTAGGTAGGACTACAGATATATGCCACCACGTCCAGCAAATTTTGTTTGTTTGTAGAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 72 bp ACCCCATCTCTACAAACAAACAAAATTTGCTGGACGTaGTGGCATATATCTGTAGTCCTACCTACTTGGGAG +
Preference number: 3 (lower is better)
Translates to: TPSLQTNKICWT*WHISVVLPTWE
Trigger: CTCCCAAGTAGGTAGGACTACAGATATATGCCACCACGTCCAGCAAATTTTGTTTGTTTGTAGAGATGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 72 bp ATGAGTAAAGCCTTTTGCCTGCTTGGTCAAATGAGCTaGAAAGTTGTGACTCTCAGACTGCTAGTGGCTATA +
Preference number: 3 (lower is better)
Translates to: MSKAFCLLGQMS*KVVTLRLLVAI
Trigger: TATAGCCACTAGCAGTCTGAGAGTCACAACTTTCCAGCTCATTTGACCAAGCAGGCAAAAGGCTTTACTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CAA 90 bp CCATCCAATACTGGAAGGTTAGCAATAGAGTCACTCTCTTGGATGTGTGCCACTTCCAGAGATCTAGCTTaGGGATTTAGGCAAAATCTA +
Preference number: 3 (lower is better)
Translates to: PSNTGRLAIESLSWMCATSRDLA*GFRQNL
Trigger: TAGATTTTGCCTAAATCCCAAAGCTAGATCTCTGGA...AGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 72 bp AGTCATTTCTGTGATTGTCCCAGAGGTCACTGTCACTaGGCTCACCAAAGGCCTTTTGATTTTAGTGTAACA +
Preference number: 3 (lower is better)
Translates to: SHFCDCPRGHCH*AHQRPFDFSVT
Trigger: TGTTACACTAAAATCAAAAGGCCTTTGGTGAGCTCAGTGACAGTGACCTCTGGGACAATCACAGAAATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 72 bp TGCTTTTTCTCTCTACTGAAAGCCTGGAAGTCTGAATaGTTTATCCAGTTCTACAAAGGACAACCTGGTCCC +
Preference number: 3 (lower is better)
Translates to: CFFSLLKAWKSE*FIQFYKGQPGP
Trigger: GGGACCAGGTTGTCCTTTGTAGAACTGGATAAATCATTCAGACTTCCAGGCTTTCAGTAGAGAGAAAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 72 bp ATGGTGCTGTGGAATTTCTCAAATCTTAACAGAACTTaGAATGTCCTCCCACGAATAGCTTCCTTCCTCCCT +
Preference number: 3 (lower is better)
Translates to: MVLWNFSNLNRT*NVLPRIASFLP
Trigger: AGGGAGGAAGGAAGCTATTCGTGGGAGGACATTTCAAGTTCTGTTAAGATTTGAGAAATTCCACAGCACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 72 bp CTTCCTAGCTACTTCTACACCTCATGCCATTTTTGGTaGGTCATCTTAGGCCACCTGATAAGTATTCAGGAA +
Preference number: 3 (lower is better)
Translates to: LPSYFYTSCHFW*VILGHLISIQE
Trigger: TTCCTGAATACTTATCAGGTGGCCTAAGATGACTCACCAAAAATGGCATGAGGTGTAGAAGTAGCTAGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 72 bp AGTCCATGTCTGATTTCTCATTATCCAGAGAAATGTTaGCAACATCAGACCACAAGGGACATCCTGGTTGGA +
Preference number: 3 (lower is better)
Translates to: SPCLISHYPEKC*QHQTTRDILVG
Trigger: TCCAACCAGGATGTCCCTTGTGGTCTGATGTTGTCAACATTTCTCTGGATAATGAGAAATCAGACATGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529387.5
3UTR GCA 72 bp TCTTTCTCCAGGATTGTTCTCATGAGTAAAGCCTTTTaGCTGCTTGGTCAAATGAGCTGGAAAGTTGTGACT +
Preference number: 3 (lower is better)
Translates to: SFSRIVLMSKAF*LLGQMSWKVVT
Trigger: AGTCACAACTTTCCAGCTCATTTGACCAAGCAGGCAAAAGGCTTTACTCATGAGAACAATCCTGGAGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CAA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGTGCTGGTTCTTAGATTaGTGTCTTGTCCCCGTAGTC +
Preference number: 3 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWCWFLD*CLVPVV
Trigger: GACTACGGGGACAAGACACAAATCTAAGAACCAGCA...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CAA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATGATGGGCACAGAGGTTaGAAATCAGCCTCCCTTAAA +
Preference number: 3 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNDGHRG*KSASLK
Trigger: TTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCATC...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CAA 90 bp ACTATTCAGAAATATTTACAGATGTGGTCAGGTGCCTTGGGTTTGGGTGGCAGCGTAGTTTTGTTGTCTTaGGAATTGCAGGTTTCCAAT +
Preference number: 3 (lower is better)
Translates to: TIQKYLQMWSGALGLGGSVVLLS*ELQVSN
Trigger: ATTGGAAACCTGCAATTCCAAAGACAACAAAACTAC...GCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CAA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTTGCTGGTTCTTAGATTaGTGTCTTGTCCCCGTAGTC +
Preference number: 3 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSCWFLD*CLVPVV
Trigger: GACTACGGGGACAAGACACAAATCTAAGAACCAGCA...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CAA 90 bp ATAAATTCATATGTAGCTTTTCCCTTAAGTAATGTGAGGCACACCTCCATCCAAGATGGGCACAGAGGTTaGAAATCAGCCTCCCTTAAA +
Preference number: 3 (lower is better)
Translates to: INSYVAFPLSNVRHTSIQDGHRG*KSASLK
Trigger: TTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCATC...TTGGATGGAGGTGTGCCTCACATTACTTAAGGGAAAAGCTACATATGAATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CAA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTAGATGGGCACAGAGGTTaGAAATCAGCCTCCCTTAAA +
Preference number: 3 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLDGHRG*KSASLK
Trigger: TTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCATC...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CAA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTGATGGGCACAGAGGTTaGAAATCAGCCTCCCTTAAA +
Preference number: 3 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSDGHRG*KSASLK
Trigger: TTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCATC...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CAA 90 bp AAGTTTGGATGGATTAAGAGGTTCAGGGATGAACATTCAGACAAGAACGAGTCAAAGGTATACTCGCTTTaGCTTTGTCCTAGCCACTTA +
Preference number: 3 (lower is better)
Translates to: KFGWIKRFRDEHSDKNESKVYSL*LCPSHL
Trigger: TAAGTGGCTAGGACAAAGCAAAAGCGAGTATACCTT...TGACTCGTTCTTGTCTGAATGTTCATCCCTGAACCTCTTAATCCATCCAAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CAA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTGCTGGTTCTTAGATTaGTGTCTTGTCCCCGTAGTC +
Preference number: 3 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFCWFLD*CLVPVV
Trigger: GACTACGGGGACAAGACACAAATCTAAGAACCAGCA...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CAA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTGATGGGCACAGAGGTTaGAAATCAGCCTCCCTTAAA +
Preference number: 3 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCDGHRG*KSASLK
Trigger: TTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCATC...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CAA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATAACTCTCTTTCAGAATaGCAAATGGAGTCCTGGTTC +
Preference number: 3 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNNSLSE*QMESWF
Trigger: GAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTT...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR TCA 72 bp AAGCTACAACTCCCTCTTAGATTAGCATTTGAGGAATaGATGGTGCTTAGTTGGATGAAGCAGCAACAGTAT +
Preference number: 3 (lower is better)
Translates to: KLQLPLRLAFEE*MVLSWMKQQQY
Trigger: ATACTGTTGCTGCTTCATCCAACTAAGCACCATTCATTCCTCAAATGCTAATCTAAGAGGGAGTTGTAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR TCA 72 bp AGATTTTTGCTGTTAAGCAGCTTCTGCCTGGAGTTCTaGATCCAGATGAATCTGTCGTTTCATTCAGAAACT +
Preference number: 3 (lower is better)
Translates to: RFLLLSSFCLEF*IQMNLSFHSET
Trigger: AGTTTCTGAATGAAACGACAGATTCATCTGGATTCAGAACTCCAGGCAGAAGCTGCTTAACAGCAAAAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CCA 72 bp AACAATAGTGGAGGCTATGAGAAACACAAGTTTGGATaGATTAAGAGGTTCAGGGATGAACATTCAGACAAG +
Preference number: 3 (lower is better)
Translates to: NNSGGYEKHKFG*IKRFRDEHSDK
Trigger: CTTGTCTGAATGTTCATCCCTGAACCTCTTAATCCATCCAAACTTGTGTTTCTCATAGCCTCCACTATTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR-3UTR CAA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAACTCTCTTTCAGAATaGCAAATGGAGTCCTGGTTC +
Preference number: 3 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSNSLSE*QMESWF
Trigger: GAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTT...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
3UTR-3UTR CAA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTATCCAGAGAAATGTaGACAACATCAGACCACAAG +
Preference number: 3 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKLSREM*TTSDHK
Trigger: CTTGTGGTCTGATGTTGTCAACATTTCTCTGGATAA...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529387.5
3UTR TCA 72 bp AGCTCCATTTCTCCTTTTCTTGTTCTTAAGCTAGTCTaGGCTATCTTCCTGTCATTTGCAACCAAAAATTTT +
Preference number: 3 (lower is better)
Translates to: SSISPFLVLKLV*AIFLSFATKNF
Trigger: AAAATTTTTGGTTGCAAATGACAGGAAGATAGCTCAGACTAGCTTAAGAACAAGAAAAGGAGAAATGGAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCCGCCCCGCGCCTCGTaGCTGTTGCCGTCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVPPRAS*LLPSAR
Trigger: CCGGGCAGACGGCAACAGTCACGAGGCGCGGGGCGG...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATGTCGCGCCTCGTGACTGTTaGCGTCTGCCCGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: RSWACWFLDLCLVPVVHVAPRDC*RLPGGA
Trigger: GGCCCCGCCGGGCAGACGGCAACAGTCACGAGGCGC...GACATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCGTAGTAGGAGGCGCTaGGCGGGCCGAGCTGCGCGC +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVRSRRR*AGRAAR
Trigger: GCGCGCAGCTCGGCCCGCGCAGCGCCTCCTACTACG...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCGTGACTGTTGCCGTCTaGCCGGCGGGGCCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIVTVAV*PAGPLA
Trigger: GGCCAGCGGCCCCGCCGGGCAGACGGCAACAGTCAC...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCATGGCGTCTCCAGGCTaGCACCGCGGCTGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVMASPG*HRGWRP
Trigger: AGGGCGCCAGCCGCGGTGGCAGCCTGGAGACGCCAT...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATCCGCCAGCTCGTCCATaGAAACGGCCGGCACCCCCG +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANPPARP*KRPAPP
Trigger: CGGGGGTGCCGGCCGTTTCCATGGACGAGCTGGCGG...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTACGCGCTCCGCTTGGATaGCGTCTCCAGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVRAPLG*RLQAAT
Trigger: GGTGGCAGCCTGGAGACGCCATCCAAGCGGAGCGCG...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGCCGCCCCGCGCCTCGTaGCTGTTGCCGTCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWPPRAS*LLPSAR
Trigger: CCGGGCAGACGGCAACAGTCACGAGGCGCGGGGCGG...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGGTGACTGTTGCCGTCTaGCCGGCGGGGCCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGVTVAV*PAGPLA
Trigger: GGCCAGCGGCCCCGCCGGGCAGACGGCAACAGTCAC...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATTCAGGGGCTCGCGGCTaGGGCTGCGCTGACCGTAGT +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANSGARG*GCADRS
Trigger: ACTACGGTCAGCGCAGCCGCAGCCGCGAGCCCCTGA...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCGGCGCTCCCGCGCGCTaGCCAGGTACGAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIGAPAR*PGTSGR
Trigger: ACGACCACTCGTACCTGGGCAGCGCGCGGGAGCGCC...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGCGTAGTAGGAGGCGCTaGGCGGGCCGAGCTGCGCGC +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGRSRRR*AGRAAR
Trigger: GCGCGCAGCTCGGCCCGCGCAGCGCCTCCTACTACG...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp AGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATGTCCGGCCGGCACCCCCGTaGCGAAGTTCTTCCGCGACA +
Preference number: 4 (lower is better)
Translates to: RSWACWFLDLCLVPVVHVRPAPP*RSSSAT
Trigger: TGTCGCGGAAGAACTTCGCCACGGGGGTGCCGGCCG...GACATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATTTTGGGTGCGGTGCCTaGCGTGCGGCTCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANFGCGA*RAAHQP
Trigger: CGGCTGGTGAGCCGCACGCCAGGCACCGCACCCAAA...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCTCGGACGCGTCCTCCTaGTCGTCCTGCGACGAGCCG +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVSDASS*SSCDEP
Trigger: CGGCTCGTCGCAGGACGACCAGGAGGACGCGTCCGA...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATTCGGACGCGTCCTCCTaGTCGTCCTGCGACGAGCCG +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANSDASS*SSCDEP
Trigger: CGGCTCGTCGCAGGACGACCAGGAGGACGCGTCCGA...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGGCCTAGCATCTCCGTaGGGCCTGCCCTGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVGLASP*GLPCVG
Trigger: ACCAACACAGGGCAGGCCTCACGGAGATGCTAGGCC...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGAGCGCGGCTGGCTGTaGCTGAAGCTCTCTCGATCC +
Preference number: 4 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVERGWL*LKLSRS
Trigger: GGATCGAGAGAGCTTCAGGCACAGCCAGCCGCGCTC...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATGTCGCTCGCGGCTGCGGCTaGGCTGACCGTAGTACTCCT +
Preference number: 4 (lower is better)
Translates to: RSWACWFLDLCLVPVVHVARGCG*ADRSTP
Trigger: AGGAGTACTACGGTCAGCGCAGCCGCAGCCGCGAGC...GACATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATGCTCGCGGCTGCGGCTaGGCTGACCGTAGTACTCCT +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANARGCG*ADRSTP
Trigger: AGGAGTACTACGGTCAGCGCAGCCGCAGCCGCGAGC...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGGGCGCTCCCGCGCGCTaGCCAGGTACGAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGGAPAR*PGTSGR
Trigger: ACGACCACTCGTACCTGGGCAGCGCGCGGGAGCGCC...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGATGGCGTCTCCAGGCTaGCACCGCGGCTGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGMASPG*HRGWRP
Trigger: AGGGCGCCAGCCGCGGTGGCAGCCTGGAGACGCCAT...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGCTGCGCGGGCCGAGCTaGGCGCTCCGCTTGGATGGC +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWLRGPS*ALRLDG
Trigger: GCCATCCAAGCGGAGCGCGCAGCTCGGCCCGCGCAG...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CAAGCACAGCAGCTTATGCATCATCCCCCTGGGACCCCTGCTGCTCACCCTTTCTGGTGCCAAGGGAGGTaGATGCGGCTTGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: QAQQLMHHPPGTPAAHPFWCQGR*MRLVHQ
Trigger: CTGATGGACAAGCCGCATCCACCTCCCTTGGCACCA...GAAAGGGTGAGCAGCAGGGGTCCCAGGGGGATGATGCATAAGCTGCTGTGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCCGGCCGGCACCCCCGTaGCGAAGTTCTTCCGCGACA +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIRPAPP*RSSSAT
Trigger: TGTCGCGGAAGAACTTCGCCACGGGGGTGCCGGCCG...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGCCGCCAGCTCGTCCATaGAAACGGCCGGCACCCCCG +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGPPARP*KRPAPP
Trigger: CGGGGGTGCCGGCCGTTTCCATGGACGAGCTGGCGG...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCTTTGGGTGCGGTGCCTaGCGTGCGGCTCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIFGCGA*RAAHQP
Trigger: CGGCTGGTGAGCCGCACGCCAGGCACCGCACCCAAA...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCCGCGCTCCGCTTGGATaGCGTCTCCAGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIRAPLG*RLQAAT
Trigger: GGTGGCAGCCTGGAGACGCCATCCAAGCGGAGCGCG...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCGCGCCTCGTGACTGTTaGCGTCTGCCCGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGAPRDC*RLPGGA
Trigger: GGCCCCGCCGGGCAGACGGCAACAGTCACGAGGCGC...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCGTGCGGTGCCTGGCGTaGGGCTCACCAGCCGCGGCA +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGVRCLA*GSPAAA
Trigger: TGCCGCGGCTGGTGAGCCGCACGCCAGGCACCGCAC...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCGTATTTGGGTGCGGTaGCTGGCGTGCGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVRIWVR*LACGSP
Trigger: TGGTGAGCCGCACGCCAGGCACCGCACCCAAATACG...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCTCCCCCTGGGACCCCTaGTGCTCACCCTTTCCCGAT +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVSPWDP*CSPFPD
Trigger: ATCGGGAAAGGGTGAGCAGCAGGGGTCCCAGGGGGA...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CAAGCACAGCAGCTTATGCATCATCCCCCTGGGACCCCTGCTGCTCACCCTTTCCTCTTGCTGAGAGATTaGGCCCGGGTAGAGGACATG +
Preference number: 4 (lower is better)
Translates to: QAQQLMHHPPGTPAAHPFLLLRD*ARVEDM
Trigger: CATGTCCTCTACCCGGGCCCAATCTCTCAGCAAGAG...GAAAGGGTGAGCAGCAGGGGTCCCAGGGGGATGATGCATAAGCTGCTGTGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp AGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATGTCGCAGCAGCAGGAATCTaGGCAGCATGGGCAGCGGAC +
Preference number: 4 (lower is better)
Translates to: RSWACWFLDLCLVPVVHVAAAGI*AAWAAD
Trigger: GTCCGCTGCCCATGCTGCCCAGATTCCTGCTGCTGC...GACATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATTCGGGCACTGTGACCTaGAGGCCTTCGACCATGGCT +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANSGTVT*RPSTMA
Trigger: AGCCATGGTCGAAGGCCTTCAGGTCACAGTGCCCGA...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp CAAGCACAGCAGCTTATGCATCATCCCCCTGGGACCCCTGCTGCTCACCCTTTCCCTGGCAGTAGGACTTaGACTTCCACTGCACAACTG +
Preference number: 4 (lower is better)
Translates to: QAQQLMHHPPGTPAAHPFPGSRT*TSTAQL
Trigger: CAGTTGTGCAGTGGAAGTTCAAGTCCTACTGCCAGG...GAAAGGGTGAGCAGCAGGGGTCCCAGGGGGATGATGCATAAGCTGCTGTGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCGTGGTCGTATTTGGGTaGGGTGCCTGGCGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIVVVFG*GAWRAA
Trigger: AGCCGCACGCCAGGCACCGCACCCAAATACGACCAC...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AGGAGAAGAAACAAAAGGACACATAGAGGAAAGTCAGGGGTGCTGAGGACAAGAGGCGCTCCCGCGCGCTaGCCAGGTACGAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: RRRNKRTHRGKSGVLRTRGAPAR*PGTSGR
Trigger: ACGACCACTCGTACCTGGGCAGCGCGCGGGAGCGCC...TCTTGTCCTCAGCACCCCTGACTTTCCTCTATGTGTCCTTTTGTTTCTTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGACTGCGCGGGCCGAGCTaGGCGCTCCGCTTGGATGGC +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGLRGPS*ALRLDG
Trigger: GCCATCCAAGCGGAGCGCGCAGCTCGGCCCGCGCAG...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGACGTAGTAGGAGGCGCTaGGCGGGCCGAGCTGCGCGC +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGRSRRR*AGRAAR
Trigger: GCGCGCAGCTCGGCCCGCGCAGCGCCTCCTACTACG...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGAGCCGGCCTTGTAGGTaGCGGGCGGCGACCAAGCGT +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWSRPCR*RAATKR
Trigger: ACGCTTGGTCGCCGCCCGGCACCTACAAGGCCGGCT...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CTGGTTTGCAGACAGATACCTTGCTGTATCCTCACATGGCAGAGAAAGAGAGGACGGCCGGCACCCCCGTaGCGAAGTTCTTCCGCGACA +
Preference number: 4 (lower is better)
Translates to: LVCRQIPCCILTWQRKRGRPAPP*RSSSAT
Trigger: TGTCGCGGAAGAACTTCGCCACGGGGGTGCCGGCCG...TCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATACGAGTGGTCGTATTTaGGTGCGGTGCCTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANTSGRI*VRCLAC
Trigger: GCACGCCAGGCACCGCACCCAAATACGACCACTCGT...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGTCGGACGCGTCCTCCTaGTCGTCCTGCGACGAGCCG +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWSDASS*SSCDEP
Trigger: CGGCTCGTCGCAGGACGACCAGGAGGACGCGTCCGA...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTACTGATGGGAGGATGTTaGGAAGTGGCAGCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVLMGGC*EVAAKH
Trigger: GTGCTTCGCTGCCACTTCTCAACATCCTCCCATCAG...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGCACCTCCCTGCCACCTaGATCCACACTCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGHLPAT*IHTPSS
Trigger: GGAGGAGGGAGTGTGGATGCAGGTGGCAGGGAGGTG...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTATGGGCTGGAAGAGCATaGCCACCTTCTTCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVWAGRA*PPSSCR
Trigger: CCGACAAGAAGAAGGTGGCCATGCTCTTCCAGCCCA...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCTGCCCAGGTACGAGTaGTCGTATTTGGGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVLPRYE*SYLGAV
Trigger: CACCGCACCCAAATACGACCACTCGTACCTGGGCAG...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CCATCCAATACTGGAAGGTTAGCAATAGAGTCACTCTCTTGGATGTGTGCCACTGCTGCGCGCTCCGCTTaGATGGCGTCTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PSNTGRLAIESLSWMCATAARSA*MASPGC
Trigger: GCAGCCTGGAGACGCCATCCAAGCGGAGCGCGCAGC...AGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGATGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTAGTCCTACCTACTTaGGAGGCTGAGGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVVVLPT*EAEGGG
Trigger: TCCTCCTCCCTCAGCCTCCCAAGTAGGTAGGACTAC...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CAAGCACAGCAGCTTATGCATCATCCCCCTGGGACCCCTGCTGCTCACCCTTTCCATCATGAACAATCGTaGTCTCTCTGCCCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: QAQQLMHHPPGTPAAHPFHHEQS*SLCPCR
Trigger: TCTACAGGGGCAGAGAGATCACGATTGTTCATGATG...GAAAGGGTGAGCAGCAGGGGTCCCAGGGGGATGATGCATAAGCTGCTGTGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTACTGGCTGGATCAAACTaGGCCAGCTCCTTCTCAACA +
Preference number: 4 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVLAGSN*ASSFST
Trigger: TGTTGAGAAGGAGCTGGCTCAGTTTGATCCAGCCAG...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATCACTGCTGCCTCCCATaGCACCTGACCAATAGTCAG +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANHCCLP*HLTNSQ
Trigger: CTGACTATTGGTCAGGTGTCATGGGAGGCAGCAGTG...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTCCGCCCCGCGCCTCGTaGCTGTTGCCGTCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSPPRAS*LLPSAR
Trigger: CCGGGCAGACGGCAACAGTCACGAGGCGCGGGGCGG...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCCTCCAGCGTGTTCCTaGCTCAGTAGTGACTCACAG +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVPPACS*LSSDSQ
Trigger: CTGTGAGTCACTACTGAGTCAGGAACACGCTGGAGG...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp AGGAGAAGAAACAAAAGGACACATAGAGGAAAGTCAGGGGTGCTGAGGACAAGATCACAGCCGCAGAACTaGGCCCCAGGAGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: RRRNKRTHRGKSGVLRTRSQPQN*APGAAT
Trigger: CGTGGCTGCTCCTGGGGCTCAGTTCTGCGGCTGTGA...TCTTGTCCTCAGCACCCCTGACTTTCCTCTATGTGTCCTTTTGTTTCTTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGGATCCGGTAACCTTTaGGAACACTGTGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVGSGNL*EHCGFL
Trigger: GAGGAAGCCACAGTGTTCGCAAAGGTTACCGGATCC...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271417.8
ENST00000529071.5
CDS-3UTR GCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCTCTTCTTCTCCGAGTTaGTGTGGTAGGGCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVSSSPS*CGRAGR
Trigger: GCGACCTGCCCTACCACAGCAACTCGGAGAAGAAGA...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTACTGCCTGCCATCCCTTaGCAAAGCAGAGATCAGCAA +
Preference number: 4 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVLPAIP*QSRDQQ
Trigger: TTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAG...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATCCCTTAAAGGCTGCCTaGCATCCCTTGCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANPLKAA*HPLPKQ
Trigger: CTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGG...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCCCTTAAAGGCTGCCTaGCATCCCTTGCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVPLKAA*HPLPKQ
Trigger: CTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGG...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATTGGGCTGGAAGAGCATaGCCACCTTCTTCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANWAGRA*PPSSCR
Trigger: CCGACAAGAAGAAGGTGGCCATGCTCTTCCAGCCCA...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCGGAATCTGGGCAGCATaGGCAGCGGACATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIGIWAA*AADIAA
Trigger: TGCTGCTATGTCCGCTGCCCATGCTGCCCAGATTCC...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGATTTGGGTGCGGTGCCTaGCGTGCGGCTCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGFGCGA*RAAHQP
Trigger: CGGCTGGTGAGCCGCACGCCAGGCACCGCACCCAAA...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGCTGCGCGCTCCGCTTaGATGGCGTCTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGAARSA*MASPGC
Trigger: GCAGCCTGGAGACGCCATCCAAGCGGAGCGCGCAGC...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCGTGTCTTCCAGCCCTTaGAAGTGCCAGCACTGGGTT +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVVSSSP*KCQHWV
Trigger: AACCCAGTGCTGGCACTTCCAAGGGCTGGAAGACAC...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CAAGCACAGCAGCTTATGCATCATCCCCCTGGGACCCCTGCTGCTCACCCTTTCAGACTAGTTACTTCATaGCCAGCCCCACCAAGAAAC +
Preference number: 4 (lower is better)
Translates to: QAQQLMHHPPGTPAAHPFRLVTS*PAPPRN
Trigger: GTTTCTTGGTGGGGCTGGCCATGAAGTAACTAGTCT...GAAAGGGTGAGCAGCAGGGGTCCCAGGGGGATGATGCATAAGCTGCTGTGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CAA 72 bp ACCAGCAAGTCTAAAACTCAGCACCAGGGTTATGGCTaGTGTCTTCCAGCCCTTGGAAGTGCCAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: TSKSKTQHQGYG*CLPALGSASTG
Trigger: CCCAGTGCTGGCACTTCCAAGGGCTGGAAGACACAAGCCATAACCCTGGTGCTGAGTTTTAGACTTGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCCTGATGGGAGGATGTTaGGAAGTGGCAGCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEILMGGC*EVAAKH
Trigger: GTGCTTCGCTGCCACTTCTCAACATCCTCCCATCAG...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp AGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATGTCCCTGGCAGTAGGACTTaGACTTCCACTGCACAACTG +
Preference number: 4 (lower is better)
Translates to: RSWACWFLDLCLVPVVHVPGSRT*TSTAQL
Trigger: CAGTTGTGCAGTGGAAGTTCAAGTCCTACTGCCAGG...GACATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATAGAAATCTCCCAGGGTaGCAGTCGAGCCCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANRNLPG*QSSPVL
Trigger: CAAAACAGGGCTCGACTGTCACCCTGGGAGATTTCT...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCAGAAATCTCCCAGGGTaGCAGTCGAGCCCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVRNLPG*QSSPVL
Trigger: CAAAACAGGGCTCGACTGTCACCCTGGGAGATTTCT...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATCACCAGCAGTTCCACTaGGTCCTCATTTTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANHQQFH*VLIFPL
Trigger: GAGGGGAAAAATGAGGACTCAGTGGAACTGCTGGTG...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCCCGCCCCGCGCCTCGTaGCTGTTGCCGTCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGPPRAS*LLPSAR
Trigger: CCGGGCAGACGGCAACAGTCACGAGGCGCGGGGCGG...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATACCGCCCCGCGCCTCGTaGCTGTTGCCGTCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIPPRAS*LLPSAR
Trigger: CCGGGCAGACGGCAACAGTCACGAGGCGCGGGGCGG...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp AGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATGTCGCAAATCTTCCAAGGTaGTGGCCAGAGAAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RSWACWFLDLCLVPVVHVANLPR*WPEKVL
Trigger: CAGGACCTTCTCTGGCCATCACCTTGGAAGATTTGC...GACATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATCCAAGGATTCTCCCATaGGATCCTGGCAGTAGGACT +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANPRILP*DPGSRT
Trigger: AGTCCTACTGCCAGGATCGCATGGGAGAATCCTTGG...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGGCTTGTCCATCAGCATaGCAGATGAGGGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGACPSA*QMRGLL
Trigger: GAGGAGCCCCCTCATCTGGCATGCTGATGGACAAGC...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR GCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATGGATCCGGTAACCTTTaGGAACACTGTGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANGSGNL*EHCGFL
Trigger: GAGGAAGCCACAGTGTTCGCAAAGGTTACCGGATCC...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR GCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTGTGACTGTTGCCGTCTaGCCGGCGGGGCCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSVTVAV*PAGPLA
Trigger: GGCCAGCGGCCCCGCCGGGCAGACGGCAACAGTCAC...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATGCGCCTCGTGACTGTTaGCGTCTGCCCGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNAPRDC*RLPGGA
Trigger: GGCCCCGCCGGGCAGACGGCAACAGTCACGAGGCGC...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AGGAGAAGAAACAAAAGGACACATAGAGGAAAGTCAGGGGTGCTGAGGACAAGACGTATTTGGGTGCGGTaGCTGGCGTGCGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: RRRNKRTHRGKSGVLRTRRIWVR*LACGSP
Trigger: TGGTGAGCCGCACGCCAGGCACCGCACCCAAATACG...TCTTGTCCTCAGCACCCCTGACTTTCCTCTATGTGTCCTTTTGTTTCTTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCGTGGTCGTATTTGGGTaGGGTGCCTGGCGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGVVVFG*GAWRAA
Trigger: AGCCGCACGCCAGGCACCGCACCCAAATACGACCAC...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATCTGCGCGGGCCGAGCTaGGCGCTCCGCTTGGATGGC +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNLRGPS*ALRLDG
Trigger: GCCATCCAAGCGGAGCGCGCAGCTCGGCCCGCGCAG...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCTCTTCTTCTCCGAGTTaGTGTGGTAGGGCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEISSSPS*CGRAGR
Trigger: GCGACCTGCCCTACCACAGCAACTCGGAGAAGAAGA...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCCCCTGGGACCCCTGCTaGTCACCCTTTCCCGATCCT +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGPWDPC*SPFPDP
Trigger: AGGATCGGGAAAGGGTGAGCAGCAGGGGTCCCAGGG...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCCTCTTGCTGAGAGATTaGGCCCGGGTAGAGGACATG +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEILLLRD*ARVEDM
Trigger: CATGTCCTCTACCCGGGCCCAATCTCTCAGCAAGAG...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTACCCCTCCAGGTCATCTaGGGTGGTGATAATACAGTA +
Preference number: 4 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVPLQVI*GGDNTV
Trigger: TACTGTATTATCACCACCCCAGATGACCTGGAGGGG...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp ATAGGGTCTAGCCCCAGTAGGGTGGCTCTGGAGAAGACCAAAAGGATGGTAAAGTCCAGTGGAGTCACTTaGTGCCAAGGGAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: IGSSPSRVALEKTKRMVKSSGVT*CQGRWM
Trigger: CATCCACCTCCCTTGGCACCAAGTGACTCCACTGGA...CTTTACCATCCTTTTGGTCTTCTCCAGAGCCACCCTACTGGGGCTAGACCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAAGTCGAGCCCTGTTTTaGAGCTACTACTCGAACAGT +
Preference number: 4 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVSRALF*SYYSNS
Trigger: ACTGTTCGAGTAGTAGCTTCAAAACAGGGCTCGACT...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCCACCAGCAGTTCCACTaGGTCCTCATTTTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIHQQFH*VLIFPL
Trigger: GAGGGGAAAAATGAGGACTCAGTGGAACTGCTGGTG...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCGCTTCATACAAGGCTTaGGGGCAGCAGCAGGAATCT +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIASYKA*GQQQES
Trigger: AGATTCCTGCTGCTGCCCTCAAGCCTTGTATGAAGC...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR TCA 90 bp CTGGTTTGCAGACAGATACCTTGCTGTATCCTCACATGGCAGAGAAAGAGAGGACCTGCCCTGTGTTGGTaGATATGGGCAGCAGCACTC +
Preference number: 4 (lower is better)
Translates to: LVCRQIPCCILTWQRKRGPALCW*IWAAAL
Trigger: GAGTGCTGCTGCCCATATTCACCAACACAGGGCAGG...TCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CCATCCAATACTGGAAGGTTAGCAATAGAGTCACTCTCTTGGATGTGTGCCACTCCAGCCCCAAAGGATTaGGAGGGACCTCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: PSNTGRLAIESLSWMCATPAPKD*EGPHQD
Trigger: GTCCTGGTGAGGTCCCTCTCAATCCTTTGGGGCTGG...AGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGACTAGCGTACTCTGGTaGGCCCATCCAGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWTSVLW*AHPGHS
Trigger: GCTGTGACCTGGATGGGCTCACCAGAGTACGCTAGT...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGATCAATTCCCCAGATaGCTAGGGGGTAGGATAATG +
Preference number: 4 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVDQFPR*LGGRIM
Trigger: CATTATCCTACCCCCTAGTCATCTGGGGAATTGATC...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTACCCTTCATCTCCTTCTaGATGTTACAGTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVPFISF*MLQSVE
Trigger: CTCCACAGACTGTAACATTCAGAAGGAGATGAAGGG...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTACTCGAACAGTCCTCCTaGTGTCCAAACAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVLEQSS*CPNNPS
Trigger: ACTTGGATTGTTTGGACAGCAGGAGGACTGTTCGAG...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTACTTTGCTGCTTTCCCTaGTTCATACAAGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVLCCFP*FIQGLR
Trigger: CCTCAAGCCTTGTATGAAGCAGGGAAAGCAGCAAAG...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271417.8
ENST00000529071.5
CDS-3UTR GCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATAAGACTGGCGGAAATTaGTGTCCTCCTCATGTAGGG +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANKTGGN*CPPHVG
Trigger: CCCTACATGAGGAGGACAGCAATTTCCGCCAGTCTT...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGAGCGCGGCTGGCTGTaGCTGAAGCTCTCTCGATCC +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGERGWL*LKLSRS
Trigger: GGATCGAGAGAGCTTCAGGCACAGCCAGCCGCGCTC...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCGTGACTGTTGCCGTCTaGCCGGCGGGGCCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGVTVAV*PAGPLA
Trigger: GGCCAGCGGCCCCGCCGGGCAGACGGCAACAGTCAC...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAGCGCCTCGTGACTGTTaGCGTCTGCCCGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKAPRDC*RLPGGA
Trigger: GGCCCCGCCGGGCAGACGGCAACAGTCACGAGGCGC...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCGCGCCTCGTGACTGTTaGCGTCTGCCCGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGAPRDC*RLPGGA
Trigger: GGCCCCGCCGGGCAGACGGCAACAGTCACGAGGCGC...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTAGTGCGGTGCCTGGCGTaGGGCTCACCAGCCGCGGCA +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLVRCLA*GSPAAA
Trigger: TGCCGCGGCTGGTGAGCCGCACGCCAGGCACCGCAC...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAGTGCGGTGCCTGGCGTaGGGCTCACCAGCCGCGGCA +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKVRCLA*GSPAAA
Trigger: TGCCGCGGCTGGTGAGCCGCACGCCAGGCACCGCAC...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTGGCGCTCCCGCGCGCTaGCCAGGTACGAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSGAPAR*PGTSGR
Trigger: ACGACCACTCGTACCTGGGCAGCGCGCGGGAGCGCC...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCCTGCGCGGGCCGAGCTaGGCGCTCCGCTTGGATGGC +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGLRGPS*ALRLDG
Trigger: GCCATCCAAGCGGAGCGCGCAGCTCGGCCCGCGCAG...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTACTGCGCGGGCCGAGCTaGGCGCTCCGCTTGGATGGC +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLLRGPS*ALRLDG
Trigger: GCCATCCAAGCGGAGCGCGCAGCTCGGCCCGCGCAG...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCCGTAGTAGGAGGCGCTaGGCGGGCCGAGCTGCGCGC +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGRSRRR*AGRAAR
Trigger: GCGCGCAGCTCGGCCCGCGCAGCGCCTCCTACTACG...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATCGTAGTAGGAGGCGCTaGGCGGGCCGAGCTGCGCGC +
Preference number: 4 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNRSRRR*AGRAAR
Trigger: GCGCGCAGCTCGGCCCGCGCAGCGCCTCCTACTACG...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGTCTTCTTCTCCGAGTTaGTGTGGTAGGGCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGSSSPS*CGRAGR
Trigger: GCGACCTGCCCTACCACAGCAACTCGGAGAAGAAGA...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCCTGCCTGCCATCCCTTaGCAAAGCAGAGATCAGCAA +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEILPAIP*QSRDQQ
Trigger: TTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAG...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGCCCTTAAAGGCTGCCTaGCATCCCTTGCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGPLKAA*HPLPKQ
Trigger: CTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGG...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGAAGCACAGCAGCTTATaGATCATCCCCCTGGGACCC +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGKHSSL*IIPLGP
Trigger: GGGTCCCAGGGGGATGATGCATAAGCTGCTGTGCTT...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGGGATCCGGTAACCTTTaGGAAAGGCTTGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGGSGNL*ERLEGS
Trigger: GCTGCCCTCAAGCCTTTCGCAAAGGTTACCGGATCC...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528703.5
CDS-3UTR CCA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAAAAGTGGGAAATGGCTaGAACAGAAGGATCGCTGTC +
Preference number: 4 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVKVGNG*NRRIAV
Trigger: GACAGCGATCCTTCTGTTCCAGCCATTTCCCACTTT...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCGAGGAAAGTGGGAAATaGCTGGAACAGAAGGATCGC +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVEESGK*LEQKDR
Trigger: GCGATCCTTCTGTTCCAGCCATTTCCCACTTTCCTC...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGTGGGCTGGAAGAGCATaGCCACCTTCTTCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGWAGRA*PPSSCR
Trigger: CCGACAAGAAGAAGGTGGCCATGCTCTTCCAGCCCA...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATCCCCTCCAGGTCATCTaGGGTGGTGATAATACAGTA +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANPLQVI*GGDNTV
Trigger: TACTGTATTATCACCACCCCAGATGACCTGGAGGGG...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCCCCTCCAGGTCATCTaGGGTGGTGATAATACAGTA +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVPLQVI*GGDNTV
Trigger: TACTGTATTATCACCACCCCAGATGACCTGGAGGGG...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGTGTGGCTTCCTCCAGTaGAGTCACTTGGTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGCGFLQ*SHLVPR
Trigger: CCTTGGCACCAAGTGACTCCACTGGAGGAAGCCACA...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCTCTCATCCTTCTGGCTaGATCAAACTGAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVSHPSG*IKLSQL
Trigger: GAGCTGGCTCAGTTTGATCCAGCCAGAAGGATGAGA...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp AGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATGTCTCTCATCCTTCTGGCTaGATCAAACTGAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RSWACWFLDLCLVPVVHVSHPSG*IKLSQL
Trigger: GAGCTGGCTCAGTTTGATCCAGCCAGAAGGATGAGA...GACATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGCTGCCCAGGTACGAGTaGTCGTATTTGGGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWLPRYE*SYLGAV
Trigger: CACCGCACCCAAATACGACCACTCGTACCTGGGCAG...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAAGGTCCTGGGCCTGCTaGTTCTTAGATTTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVRSWAC*FLDLCL
Trigger: AAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGGGCCAGAGAAGGTCCTaGGCCTGCTGGTTCTTAGAT +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGGQRRS*ACWFLD
Trigger: ATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp CTGGTTTGCAGACAGATACCTTGCTGTATCCTCACATGGCAGAGAAAGAGAGGATGTGGCACCAACCTGTaGGAAGTCCAGGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LVCRQIPCCILTWQRKRGCGTNL*EVQERG
Trigger: TCCCCTCTCCTGGACTTCCCACAGGTTGGTGCCACA...TCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp ATAGGGTCTAGCCCCAGTAGGGTGGCTCTGGAGAAGACCAAAAGGATGGTAAAGCAGGTGCCTTGGGTTTaGGTGGCAGCCTTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: IGSSPSRVALEKTKRMVKQVPWV*VAAFSH
Trigger: ATGAGAAAAGGCTGCCACCCAAACCCAAGGCACCTG...CTTTACCATCCTTTTGGTCTTCTCCAGAGCCACCCTACTGGGGCTAGACCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCAGTCGAGCCCTGTTTTaGAGCTACTACTCGAACAGT +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVSRALF*SYYSNS
Trigger: ACTGTTCGAGTAGTAGCTTCAAAACAGGGCTCGACT...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATCATGAACAATCGTaGTCTCTCTGCCCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVHHEQS*SLCPCR
Trigger: TCTACAGGGGCAGAGAGATCACGATTGTTCATGATG...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGCACCAGCAGTTCCACTaGGTCCTCATTTTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGHQQFH*VLIFPL
Trigger: GAGGGGAAAAATGAGGACTCAGTGGAACTGCTGGTG...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCTGCTTGCTTCTCATCTaGTGGAAAGACTGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVCLLLI*WKDWRK
Trigger: TTTCCGCCAGTCTTTCCATCAGATGAGAAGCAAGCA...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGGCAAATCTTCCAAGGTaGTGGCCAGAGAAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGANLPR*WPEKVL
Trigger: CAGGACCTTCTCTGGCCATCACCTTGGAAGATTTGC...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp AGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATGTCCAATTCTCCAAGCAATaGCACATACCAGCTCATCCC +
Preference number: 4 (lower is better)
Translates to: RSWACWFLDLCLVPVVHVQFSKQ*HIPAHP
Trigger: GGGATGAGCTGGTATGTGTCATTGCTTGGAGAATTG...GACATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp GAACTGGGATGGCAGAAACAATTAACGGCAAGTGAAGCACAAAACCGGAAAAGAAGCCAGACTTCTGAGTaGCTCACCACAGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ELGWQKQLTASEAQNRKRSQTSE*LTTASP
Trigger: GGGGCTGGCTGTGGTGAGTCACTCAGAAGTCTGGCT...TCTTTTCCGGTTTTGTGCTTCACTTGCCGTTAATTGTTTCTGCCATCCCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CAGAAGAATCCAGGGAGGAGACGAAAGGTCCTAATGAAGGCAGTGACACAGAGAGGGAGGAGGATTGCTTaGGCTAGGAGTTTGAGACTG +
Preference number: 4 (lower is better)
Translates to: QKNPGRRRKVLMKAVTQRGRRIA*ARSLRL
Trigger: CAGTCTCAAACTCCTAGCTCAAGCAATCCTCCTCCC...TCTCTGTGTCACTGCCTTCATTAGGACCTTTCGTCTCCTCCCTGGATTCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CAAGCACAGCAGCTTATGCATCATCCCCCTGGGACCCCTGCTGCTCACCCTTTCATCAGAGTCCTGACCTaGCTTCAGAAAACAATTGTA +
Preference number: 4 (lower is better)
Translates to: QAQQLMHHPPGTPAAHPFIRVLT*LQKTIV
Trigger: TACAATTGTTTTCTGAAGTCAGGTCAGGACTCTGAT...GAAAGGGTGAGCAGCAGGGGTCCCAGGGGGATGATGCATAAGCTGCTGTGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGCTTCCACTGCACAACTaGAGGCTGATGGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGLPLHN*RLMGGC
Trigger: ACATCCTCCCATCAGCCTGCAGTTGTGCAGTGGAAG...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCTCGAACAGTCCTCCTaGTGTCCAAACAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVLEQSS*CPNNPS
Trigger: ACTTGGATTGTTTGGACAGCAGGAGGACTGTTCGAG...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCGCTTGTCCATCAGCATaGCAGATGAGGGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGACPSA*QMRGLL
Trigger: GAGGAGCCCCCTCATCTGGCATGCTGATGGACAAGC...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR GCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAAGACTGGCGGAAATTaGTGTCCTCCTCATGTAGGG +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIKTGGN*CPPHVG
Trigger: CCCTACATGAGGAGGACAGCAATTTCCGCCAGTCTT...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCGTGACTGTTGCCGTCTaGCCGGCGGGGCCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFVTVAV*PAGPLA
Trigger: GGCCAGCGGCCCCGCCGGGCAGACGGCAACAGTCAC...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGTCAGGGGCTCGCGGCTaGGGCTGCGCTGACCGTAGT +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWSGARG*GCADRS
Trigger: ACTACGGTCAGCGCAGCCGCAGCCGCGAGCCCCTGA...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTCAGGGGCTCGCGGCTaGGGCTGCGCTGACCGTAGT +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNSGARG*GCADRS
Trigger: ACTACGGTCAGCGCAGCCGCAGCCGCGAGCCCCTGA...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTGTGCGGTGCCTGGCGTaGGGCTCACCAGCCGCGGCA +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCVRCLA*GSPAAA
Trigger: TGCCGCGGCTGGTGAGCCGCACGCCAGGCACCGCAC...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCGCTCCCGCGCGCTaGCCAGGTACGAGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIGAPAR*PGTSGR
Trigger: ACGACCACTCGTACCTGGGCAGCGCGCGGGAGCGCC...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTATGGCGTCTCCAGGCTaGCACCGCGGCTGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSMASPG*HRGWRP
Trigger: AGGGCGCCAGCCGCGGTGGCAGCCTGGAGACGCCAT...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAATGGCGTCTCCAGGCTaGCACCGCGGCTGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIMASPG*HRGWRP
Trigger: AGGGCGCCAGCCGCGGTGGCAGCCTGGAGACGCCAT...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATATGGCGTCTCCAGGCTaGCACCGCGGCTGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNMASPG*HRGWRP
Trigger: AGGGCGCCAGCCGCGGTGGCAGCCTGGAGACGCCAT...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCAGAAGGTCCTGGGCCTaGTGGTTCTTAGATTTGTGT +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVRRSWA*WFLDLC
Trigger: ACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCT...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCTCTAGTCAGGCCAAATaGTGTATGTTCCACATCCCC +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVSSQAK*CMFHIP
Trigger: GGGGATGTGGAACATACAGCATTTGGCCTGACTAGA...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGTCCAGCCCTTGGAAGTaGCAGCACTGGGTTCAACTG +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWSSPWK*QHWVQL
Trigger: CAGTTGAACCCAGTGCTGGCACTTCCAAGGGCTGGA...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp CAGAAGAATCCAGGGAGGAGACGAAAGGTCCTAATGAAGGCAGTGACACAGAGAGGGCCCGGCCTTCCTTaGCTCTTGAATGAAATCTAC +
Preference number: 4 (lower is better)
Translates to: QKNPGRRRKVLMKAVTQRGPGLP*LLNEIY
Trigger: GTAGATTTCATTCAAGAGGCAAGGAAGGCCGGGCCC...TCTCTGTGTCACTGCCTTCATTAGGACCTTTCGTCTCCTCCCTGGATTCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp ACTATTCAGAAATATTTACAGATGTGGTCAGGTGCCTTGGGTTTGGGTGGCAGCCGAAGCACAGTGGGCTaGAAGAGCATGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: TIQKYLQMWSGALGLGGSRSTVG*KSMATF
Trigger: GAAGGTGGCCATGCTCTTCCAGCCCACTGTGCTTCG...GCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCCGAAGCACAGTGGGCTaGAAGAGCATGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGRSTVG*KSMATF
Trigger: GAAGGTGGCCATGCTCTTCCAGCCCACTGTGCTTCG...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGTGTGGCTTCCTCCAGTaGAGTCACTTGGTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWCGFLQ*SHLVPR
Trigger: CCTTGGCACCAAGTGACTCCACTGGAGGAAGCCACA...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTACCGCCAGCTCGTCCATaGAAACGGCCGGCACCCCCG +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLPPARP*KRPAPP
Trigger: CGGGGGTGCCGGCCGTTTCCATGGACGAGCTGGCGG...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAACCGCCAGCTCGTCCATaGAAACGGCCGGCACCCCCG +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKPPARP*KRPAPP
Trigger: CGGGGGTGCCGGCCGTTTCCATGGACGAGCTGGCGG...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCCCGCCAGCTCGTCCATaGAAACGGCCGGCACCCCCG +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGPPARP*KRPAPP
Trigger: CGGGGGTGCCGGCCGTTTCCATGGACGAGCTGGCGG...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTTTTGGGTGCGGTGCCTaGCGTGCGGCTCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSFGCGA*RAAHQP
Trigger: CGGCTGGTGAGCCGCACGCCAGGCACCGCACCCAAA...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATCGCGCTCCGCTTGGATaGCGTCTCCAGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNRAPLG*RLQAAT
Trigger: GGTGGCAGCCTGGAGACGCCATCCAAGCGGAGCGCG...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTGCTGCGCGCTCCGCTTaGATGGCGTCTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSAARSA*MASPGC
Trigger: GCAGCCTGGAGACGCCATCCAAGCGGAGCGCGCAGC...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTTCGGACGCGTCCTCCTaGTCGTCCTGCGACGAGCCG +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSSDASS*SSCDEP
Trigger: CGGCTCGTCGCAGGACGACCAGGAGGACGCGTCCGA...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCTGGTTGGAAAGTCATTaGTTTTCTTGGCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVWLESH*FSWRAP
Trigger: AGGAGCCCGCCAAGAAAACCAATGACTTTCCAACCA...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATTGGTTGGAAAGTCATTaGTTTTCTTGGCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANWLESH*FSWRAP
Trigger: AGGAGCCCGCCAAGAAAACCAATGACTTTCCAACCA...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp AGGAGAAGAAACAAAAGGACACATAGAGGAAAGTCAGGGGTGCTGAGGACAAGAGCAGGGCTGTGTGTGTaGCACCAACCTGTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RRRNKRTHRGKSGVLRTRAGLCV*HQPVGS
Trigger: ACTTCCCACAGGTTGGTGCCACACACACAGCCCTGC...TCTTGTCCTCAGCACCCCTGACTTTCCTCTATGTGTCCTTTTGTTTCTTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CAAGCACAGCAGCTTATGCATCATCCCCCTGGGACCCCTGCTGCTCACCCTTTCAAATATTTACAGATGTaGTCAGGTGCCTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: QAQQLMHHPPGTPAAHPFKYLQM*SGALGL
Trigger: CAAACCCAAGGCACCTGACCACATCTGTAAATATTT...GAAAGGGTGAGCAGCAGGGGTCCCAGGGGGATGATGCATAAGCTGCTGTGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp AGGAGAAGAAACAAAAGGACACATAGAGGAAAGTCAGGGGTGCTGAGGACAAGACTGATGGGAGGATGTTaGGAAGTGGCAGCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: RRRNKRTHRGKSGVLRTRLMGGC*EVAAKH
Trigger: GTGCTTCGCTGCCACTTCTCAACATCCTCCCATCAG...TCTTGTCCTCAGCACCCCTGACTTTCCTCTATGTGTCCTTTTGTTTCTTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCCTGATGGGAGGATGTTaGGAAGTGGCAGCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGLMGGC*EVAAKH
Trigger: GTGCTTCGCTGCCACTTCTCAACATCCTCCCATCAG...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGCCTGGCAGTAGGACTTaGACTTCCACTGCACAACTG +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWPGSRT*TSTAQL
Trigger: CAGTTGTGCAGTGGAAGTTCAAGTCCTACTGCCAGG...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCTGCTTGCTTCTCATCTaGTGGAAAGACTGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEICLLLI*WKDWRK
Trigger: TTTCCGCCAGTCTTTCCATCAGATGAGAAGCAAGCA...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTATATCCAGAGAAATGTTaGCAACATCAGACCACAAGG +
Preference number: 4 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVYPEKC*QHQTTR
Trigger: CCTTGTGGTCTGATGTTGTCAACATTTCTCTGGATA...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATCCCGTAGTCCATGTCTaGTTTCTCATTATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANPVVHV*FLIIQR
Trigger: TCTCTGGATAATGAGAAATCAGACATGGACTACGGG...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGCAAATCTTCCAAGGTaGTGGCCAGAGAAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWANLPR*WPEKVL
Trigger: CAGGACCTTCTCTGGCCATCACCTTGGAAGATTTGC...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp CAAGCACAGCAGCTTATGCATCATCCCCCTGGGACCCCTGCTGCTCACCCTTTCTTATTCCTCTATATCTaGTCCCTCTTAGTTCTACCT +
Preference number: 4 (lower is better)
Translates to: QAQQLMHHPPGTPAAHPFLFLYI*SLLVLP
Trigger: AGGTAGAACTAAGAGGGATCAGATATAGAGGAATAA...GAAAGGGTGAGCAGCAGGGGTCCCAGGGGGATGATGCATAAGCTGCTGTGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGCCAAGGATTCTCCCATaGGATCCTGGCAGTAGGACT +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWPRILP*DPGSRT
Trigger: AGTCCTACTGCCAGGATCGCATGGGAGAATCCTTGG...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGACAAGCAGCCCTGTCCTaGCCAACACCAGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGQAALS*PTPAVP
Trigger: TGGAACTGCTGGTGTTGGGCAGGACAGGGCTGCTTG...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000526687.1
ENST00000528703.5
CDS-3UTR GCA 90 bp AGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATGTCTGGTGTTGTTATATCTaGCTCTCATCCTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RSWACWFLDLCLVPVVHVWCCYI*LSSFWL
Trigger: CAGCCAGAAGGATGAGAGGCAGATATAACAACACCA...GACATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGAAGACTGGCGGAAATTaGTGTCCTCCTCATGTAGGG +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGKTGGN*CPPHVG
Trigger: CCCTACATGAGGAGGACAGCAATTTCCGCCAGTCTT...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATATCAGGGGCTCGCGGCTaGGGCTGCGCTGACCGTAGT +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGISGARG*GCADRS
Trigger: ACTACGGTCAGCGCAGCCGCAGCCGCGAGCCCCTGA...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTAAGCCGGCCTTGTAGGTaGCGGGCGGCGACCAAGCGT +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLSRPCR*RAATKR
Trigger: ACGCTTGGTCGCCGCCCGGCACCTACAAGGCCGGCT...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCAGCCGGCCTTGTAGGTaGCGGGCGGCGACCAAGCGT +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGSRPCR*RAATKR
Trigger: ACGCTTGGTCGCCGCCCGGCACCTACAAGGCCGGCT...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AGGAGAAGAAACAAAAGGACACATAGAGGAAAGTCAGGGGTGCTGAGGACAAGAGCCTCCCTTAAAGGCTaGCTGCCATCCCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: RRRNKRTHRGKSGVLRTRASLKG*LPSLAK
Trigger: TTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGC...TCTTGTCCTCAGCACCCCTGACTTTCCTCTATGTGTCCTTTTGTTTCTTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGGAGGAAAGTGGGAAATaGCTGGAACAGAAGGATCGC +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGEESGK*LEQKDR
Trigger: GCGATCCTTCTGTTCCAGCCATTTCCCACTTTCCTC...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGACGAAGCACAGTGGGCTaGAAGAGCATGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGRSTVG*KSMATF
Trigger: GAAGGTGGCCATGCTCTTCCAGCCCACTGTGCTTCG...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCTCTCCACAGCAAAACTaGGCAAGAGATCAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEISPQQN*ARDQQA
Trigger: TGCTTGCTGATCTCTTGCCCAGTTTTGCTGTGGAGA...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000526687.1
ENST00000528703.5
CDS-3UTR CCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTCCAGTGGAGTCACTTaGTGCCAAGGGAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGSSGVT*CQGRWM
Trigger: CATCCACCTCCCTTGGCACCAAGTGACTCCACTGGA...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTCGGCCGGCACCCCCGTaGCGAAGTTCTTCCGCGACA +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSRPAPP*RSSSAT
Trigger: TGTCGCGGAAGAACTTCGCCACGGGGGTGCCGGCCG...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTACGGCCGGCACCCCCGTaGCGAAGTTCTTCCGCGACA +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLRPAPP*RSSSAT
Trigger: TGTCGCGGAAGAACTTCGCCACGGGGGTGCCGGCCG...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCCGCGCTCCGCTTGGATaGCGTCTCCAGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGRAPLG*RLQAAT
Trigger: GGTGGCAGCCTGGAGACGCCATCCAAGCGGAGCGCG...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAGCTGCGCGCTCCGCTTaGATGGCGTCTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKAARSA*MASPGC
Trigger: GCAGCCTGGAGACGCCATCCAAGCGGAGCGCGCAGC...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTAGCTGCGCGCTCCGCTTaGATGGCGTCTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLAARSA*MASPGC
Trigger: GCAGCCTGGAGACGCCATCCAAGCGGAGCGCGCAGC...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTATCGGACGCGTCCTCCTaGTCGTCCTGCGACGAGCCG +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLSDASS*SSCDEP
Trigger: CGGCTCGTCGCAGGACGACCAGGAGGACGCGTCCGA...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp AGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATGTCAGTCATTGGTTTTCTTaGCGGGCTCCTTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RSWACWFLDLCLVPVVHVSHWFS*RAPFSS
Trigger: AGAGGAAAAAGGAGCCCGCCAAGAAAACCAATGACT...GACATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCTGGTTGGAAAGTCATTaGTTTTCTTGGCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIWLESH*FSWRAP
Trigger: AGGAGCCCGCCAAGAAAACCAATGACTTTCCAACCA...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGAAGACAACTGACAGGTaGCCCTCACGAAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGKTTDR*PSRSQL
Trigger: AAGTTGGCTTCGTGAGGGCCACCTGTCAGTTGTCTT...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp ATAGGGTCTAGCCCCAGTAGGGTGGCTCTGGAGAAGACCAAAAGGATGGTAAAGCACAGTTCTAGAATCTaGGAAGTCCAAGCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: IGSSPSRVALEKTKRMVKHSSRI*EVQAQC
Trigger: GCACTGAGCTTGGACTTCCCAGATTCTAGAACTGTG...CTTTACCATCCTTTTGGTCTTCTCCAGAGCCACCCTACTGGGGCTAGACCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCCCTGGCAGTAGGACTTaGACTTCCACTGCACAACTG +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGPGSRT*TSTAQL
Trigger: CAGTTGTGCAGTGGAAGTTCAAGTCCTACTGCCAGG...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCCTGGCTGGATCAAACTaGGCCAGCTCCTTCTCAACA +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGLAGSN*ASSFST
Trigger: TGTTGAGAAGGAGCTGGCTCAGTTTGATCCAGCCAG...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCCCCGTAGTCCATGTCTaGTTTCTCATTATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIPVVHV*FLIIQR
Trigger: TCTCTGGATAATGAGAAATCAGACATGGACTACGGG...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp ATAGGGTCTAGCCCCAGTAGGGTGGCTCTGGAGAAGACCAAAAGGATGGTAAAGATTTCCAAATGCATCTaGTCACAGGAGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: IGSSPSRVALEKTKRMVKISKCI*SQESPG
Trigger: TCCAGGAGACTCCTGTGATCAGATGCATTTGGAAAT...CTTTACCATCCTTTTGGTCTTCTCCAGAGCCACCCTACTGGGGCTAGACCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAAACGAAACTCTCCTTaGGTGAAGCTACAACTCCCT +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIKRNSP*VKLQLP
Trigger: AGGGAGTTGTAGCTTCACTCAAGGAGAGTTTCGTTT...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGTTCTGCCTGGAGTTCTaGATCCAGATGAATCTGTCG +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGFCLEF*IQMNLS
Trigger: CGACAGATTCATCTGGATTCAGAACTCCAGGCAGAA...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGAAGTCATTCTGTGCCTaGAGCTCTCTCGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGKSFCA*SSLDPL
Trigger: AAGAGGATCGAGAGAGCTTCAGGCACAGAATGACTT...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469934.6
CDS-3UTR GCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCCCAAGGATTCTCCCATaGGATCCTGGCAGTAGGACT +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGPRILP*DPGSRT
Trigger: AGTCCTACTGCCAGGATCGCATGGGAGAATCCTTGG...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGACCAATAGTCAGGATTaGTCTCCAAGTCCCCAGACA +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGTNSQD*SPSPQT
Trigger: TGTCTGGGGACTTGGAGAGCAATCCTGACTATTGGT...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGGAGCGCGGCTGGCTGTaGCTGAAGCTCTCTCGATCC +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWERGWL*LKLSRS
Trigger: GGATCGAGAGAGCTTCAGGCACAGCCAGCCGCGCTC...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCGCTCGCGGCTGCGGCTaGGCTGACCGTAGTACTCCT +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGARGCG*ADRSTP
Trigger: AGGAGTACTACGGTCAGCGCAGCCGCAGCCGCGAGC...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGCTCGCGGCTGCGGCTaGGCTGACCGTAGTACTCCT +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIARGCG*ADRSTP
Trigger: AGGAGTACTACGGTCAGCGCAGCCGCAGCCGCGAGC...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AATCCAGATGAATCTGTCGTTTCATTCAGAAACTTCTCTGCAAGAAGGATTCTCGTGGTCGTATTTGGGTaGGGTGCCTGGCGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: NPDESVVSFRNFSARRILVVVFG*GAWRAA
Trigger: AGCCGCACGCCAGGCACCGCACCCAAATACGACCAC...GAGAATCCTTCTTGCAGAGAAGTTTCTGAATGAAACGACAGATTCATCTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATGTGGTCGTATTTGGGTaGGGTGCCTGGCGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNVVVFG*GAWRAA
Trigger: AGCCGCACGCCAGGCACCGCACCCAAATACGACCAC...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCAGCCGGCCTTGTAGGTaGCGGGCGGCGACCAAGCGT +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFSRPCR*RAATKR
Trigger: ACGCTTGGTCGCCGCCCGGCACCTACAAGGCCGGCT...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGTCACCTGATGGTAGTTaGAAGGTTCCCAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWSPDGS*KVPKSS
Trigger: GCTGCTCTTGGGAACCTTGCAACTACCATCAGGTGA...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp CAGAAGAATCCAGGGAGGAGACGAAAGGTCCTAATGAAGGCAGTGACACAGAGAAAAGCATCTCAACACTaGCCTTGCACCACTCTGATG +
Preference number: 4 (lower is better)
Translates to: QKNPGRRRKVLMKAVTQRKASQH*PCTTLM
Trigger: CATCAGAGTGGTGCAAGGGCAGTGTTGAGATGCTTT...TCTCTGTGTCACTGCCTTCATTAGGACCTTTCGTCTCCTCCCTGGATTCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp ATAGGGTCTAGCCCCAGTAGGGTGGCTCTGGAGAAGACCAAAAGGATGGTAAAGTGGCTTCCCCAGGGTTaGTGTGTATATATAGAGTCA +
Preference number: 4 (lower is better)
Translates to: IGSSPSRVALEKTKRMVKWLPQG*CVYIES
Trigger: TGACTCTATATATACACAGCAACCCTGGGGAAGCCA...CTTTACCATCCTTTTGGTCTTCTCCAGAGCCACCCTACTGGGGCTAGACCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGTGGAAAGTCATTCTGTaGCTGAAGCTCTCTCGATCC +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGWKVIL*LKLSRS
Trigger: GGATCGAGAGAGCTTCAGGCACAGAATGACTTTCCA...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469934.6
CDS-3UTR CCA 90 bp TCATTATCCAGAGAAATGTTGACAACATCAGACCACAAGGGACATCCTGGTTGGTGGGCTGGAAGAGCATaGCCACCTTCTTCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: SLSREMLTTSDHKGHPGWWAGRA*PPSSCR
Trigger: CCGACAAGAAGAAGGTGGCCATGCTCTTCCAGCCCA...CCAACCAGGATGTCCCTTGTGGTCTGATGTTGTCAACATTTCTCTGGATAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529387.5
CDS-3UTR CCA 90 bp AATCCAGATGAATCTGTCGTTTCATTCAGAAACTTCTCTGCAAGAAGGATTCTCGCAGCAGCAGGAATCTaGGCAGCATGGGCAGCGGAC +
Preference number: 4 (lower is better)
Translates to: NPDESVVSFRNFSARRILAAAGI*AAWAAD
Trigger: GTCCGCTGCCCATGCTGCCCAGATTCCTGCTGCTGC...GAGAATCCTTCTTGCAGAGAAGTTTCTGAATGAAACGACAGATTCATCTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCCCTTTGCGAACACTGTaGCTTCCTCCAGTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGPLRTL*LPPVES
Trigger: TGACTCCACTGGAGGAAGCCACAGTGTTCGCAAAGG...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGTGCCTCTCATCCTTCTaGCTGGATCAAACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWCLSSF*LDQTEP
Trigger: TGGCTCAGTTTGATCCAGCCAGAAGGATGAGAGGCA...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp TTTATTTCTCACAGTTCTAGAATCTGGGAAGTCCAAGCTCAGTGCACCAATACAGACTTGGAGCGCGGCTaGCTGTGCCTGAAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: FISHSSRIWEVQAQCTNTDLERG*LCLKLS
Trigger: AGAGAGCTTCAGGCACAGCCAGCCGCGCTCCAAGTC...TGTATTGGTGCACTGAGCTTGGACTTCCCAGATTCTAGAACTGTGAGAAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTTTTGGGTGCGGTGCCTaGCGTGCGGCTCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCFGCGA*RAAHQP
Trigger: CGGCTGGTGAGCCGCACGCCAGGCACCGCACCCAAA...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTCGCGCTCCGCTTGGATaGCGTCTCCAGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCRAPLG*RLQAAT
Trigger: GGTGGCAGCCTGGAGACGCCATCCAAGCGGAGCGCG...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGAGGTCCTGGGCCTGCTaGTTCTTAGATTTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGRSWAC*FLDLCL
Trigger: AAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGGGCATAGGCAATTTCTaGAGTTTAGCAGTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGGIGNF*SLAVQS
Trigger: GCTCTGGACTGCTAAACTCCAGAAATTGCCTATGCC...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp CAGAAGAATCCAGGGAGGAGACGAAAGGTCCTAATGAAGGCAGTGACACAGAGAAGGCAGTTCTTCTATTaGTATCACCTGGACTCACCC +
Preference number: 4 (lower is better)
Translates to: QKNPGRRRKVLMKAVTQRRQFFY*YHLDSP
Trigger: GGGTGAGTCCAGGTGATACCAATAGAAGAACTGCCT...TCTCTGTGTCACTGCCTTCATTAGGACCTTTCGTCTCCTCCCTGGATTCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp AGGAGAAGAAACAAAAGGACACATAGAGGAAAGTCAGGGGTGCTGAGGACAAGACCAGTAGGGTGGCTCTaGAGAAGACCAAAAGGATGG +
Preference number: 4 (lower is better)
Translates to: RRRNKRTHRGKSGVLRTRPVGWL*RRPKGW
Trigger: CCATCCTTTTGGTCTTCTCCAGAGCCACCCTACTGG...TCTTGTCCTCAGCACCCCTGACTTTCCTCTATGTGTCCTTTTGTTTCTTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp TTTATTTCTCACAGTTCTAGAATCTGGGAAGTCCAAGCTCAGTGCACCAATACATATGCATCATCCCCCTaGGACCCCTGCTGCTCACCC +
Preference number: 4 (lower is better)
Translates to: FISHSSRIWEVQAQCTNTYASSP*DPCCSP
Trigger: GGGTGAGCAGCAGGGGTCCCAGGGGGATGATGCATA...TGTATTGGTGCACTGAGCTTGGACTTCCCAGATTCTAGAACTGTGAGAAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CCATCCAATACTGGAAGGTTAGCAATAGAGTCACTCTCTTGGATGTGTGCCACTTGCCTTGGGTTTGGGTaGCAGCCTTTTCTCATCTCC +
Preference number: 4 (lower is better)
Translates to: PSNTGRLAIESLSWMCATCLGFG*QPFLIS
Trigger: GGAGATGAGAAAAGGCTGCCACCCAAACCCAAGGCA...AGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp GAACTGGGATGGCAGAAACAATTAACGGCAAGTGAAGCACAAAACCGGAAAAGATGTGGTCAGGTGCCTTaGGTTTGGGTGGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: ELGWQKQLTASEAQNRKRCGQVP*VWVAAF
Trigger: AAAGGCTGCCACCCAAACCCAAGGCACCTGACCACA...TCTTTTCCGGTTTTGTGCTTCACTTGCCGTTAATTGTTTCTGCCATCCCAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CAGAAGAATCCAGGGAGGAGACGAAAGGTCCTAATGAAGGCAGTGACACAGAGATCAGGACTAGCTGTTTaGAGTACCCAGAGGTATGAC +
Preference number: 4 (lower is better)
Translates to: QKNPGRRRKVLMKAVTQRSGLAV*STQRYD
Trigger: GTCATACCTCTGGGTACTCCAAACAGCTAGTCCTGA...TCTCTGTGTCACTGCCTTCATTAGGACCTTTCGTCTCCTCCCTGGATTCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATCTTGGTCAAATGAGCTaGAAAGTTGTGACTCTCAGA +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANLGQMS*KVVTLR
Trigger: TCTGAGAGTCACAACTTTCCAGCTCATTTGACCAAG...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CAA 72 bp AGGGAATTGGCAACAAAAGGAAGCCGGAAAGGCTGGTaGTTCAGGGCTCTGTGGCTGCAGATAAAGAATCTT +
Preference number: 4 (lower is better)
Translates to: RELATKGSRKGW*FRALWLQIKNL
Trigger: AAGATTCTTTATCTGCAGCCACAGAGCCCTGAACAACCAGCCTTTCCGGCTTCCTTTTGTTGCCAATTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTTCGGGCACTGTGACCTaGAGGCCTTCGACCATGGCT +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSSGTVT*RPSTMA
Trigger: AGCCATGGTCGAAGGCCTTCAGGTCACAGTGCCCGA...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGTCGGGCACTGTGACCTaGAGGCCTTCGACCATGGCT +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWSGTVT*RPSTMA
Trigger: AGCCATGGTCGAAGGCCTTCAGGTCACAGTGCCCGA...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGCATCATGAACAATCGTaGTCTCTCTGCCCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWHHEQS*SLCPCR
Trigger: TCTACAGGGGCAGAGAGATCACGATTGTTCATGATG...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGCTTCATACAAGGCTTaGGGGCAGCAGCAGGAATCT +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGASYKA*GQQQES
Trigger: AGATTCCTGCTGCTGCCCTCAAGCCTTGTATGAAGC...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR TCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGACTGGCTGGATCAAACTaGGCCAGCTCCTTCTCAACA +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGLAGSN*ASSFST
Trigger: TGTTGAGAAGGAGCTGGCTCAGTTTGATCCAGCCAG...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGTGCTTGCTTCTCATCTaGTGGAAAGACTGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWCLLLI*WKDWRK
Trigger: TTTCCGCCAGTCTTTCCATCAGATGAGAAGCAAGCA...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTGCGGCTGGCTGTGCCTaGAGCTCTCTCGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSAAGCA*SSLDPL
Trigger: AAGAGGATCGAGAGAGCTTCAGGCACAGCCAGCCGC...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp ATAGGGTCTAGCCCCAGTAGGGTGGCTCTGGAGAAGACCAAAAGGATGGTAAAGTATCCAGAGAAATGTTaGCAACATCAGACCACAAGG +
Preference number: 4 (lower is better)
Translates to: IGSSPSRVALEKTKRMVKYPEKC*QHQTTR
Trigger: CCTTGTGGTCTGATGTTGTCAACATTTCTCTGGATA...CTTTACCATCCTTTTGGTCTTCTCCAGAGCCACCCTACTGGGGCTAGACCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp GAACTGGGATGGCAGAAACAATTAACGGCAAGTGAAGCACAAAACCGGAAAAGAGCAAATCTTCCAAGGTaGTGGCCAGAGAAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: ELGWQKQLTASEAQNRKRANLPR*WPEKVL
Trigger: CAGGACCTTCTCTGGCCATCACCTTGGAAGATTTGC...TCTTTTCCGGTTTTGTGCTTCACTTGCCGTTAATTGTTTCTGCCATCCCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGATGGGCACAGAGGTTTaGAATCAGCCTCCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWMGTEV*NQPPLK
Trigger: CTTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCAT...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp ACTATTCAGAAATATTTACAGATGTGGTCAGGTGCCTTGGGTTTGGGTGGCAGCAGAGGTCACTGTCACTaGGCTCACCAAAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: TIQKYLQMWSGALGLGGSRGHCH*AHQRPF
Trigger: AAAAGGCCTTTGGTGAGCTCAGTGACAGTGACCTCT...GCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGACTGCAGCTGGTGCTATaGGGCTCTTTGGTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGLQLVL*GSLVVK
Trigger: TTTCACCACCAAAGAGCCTCATAGCACCAGCTGCAG...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CTGGTTTGCAGACAGATACCTTGCTGTATCCTCACATGGCAGAGAAAGAGAGGAGAAAGTCAGGGGTGCTaGGGACAAGAAGTTTTGACT +
Preference number: 4 (lower is better)
Translates to: LVCRQIPCCILTWQRKRGESQGC*GQEVLT
Trigger: AGTCAAAACTTCTTGTCCTCAGCACCCCTGACTTTC...TCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCCACATCCATGACATATaGACAAGCATCAAGTCTACG +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIHIHDI*TSIKST
Trigger: CGTAGACTTGATGCTTGTTCATATGTCATGGATGTG...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGACTTCCACTGCACAACTaGAGGCTGATGGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGLPLHN*RLMGGC
Trigger: ACATCCTCCCATCAGCCTGCAGTTGTGCAGTGGAAG...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp GAACTGGGATGGCAGAAACAATTAACGGCAAGTGAAGCACAAAACCGGAAAAGACCAAGGATTCTCCCATaGGATCCTGGCAGTAGGACT +
Preference number: 4 (lower is better)
Translates to: ELGWQKQLTASEAQNRKRPRILP*DPGSRT
Trigger: AGTCCTACTGCCAGGATCGCATGGGAGAATCCTTGG...TCTTTTCCGGTTTTGTGCTTCACTTGCCGTTAATTGTTTCTGCCATCCCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGACCAAGGATTCTCCCATaGGATCCTGGCAGTAGGACT +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGPRILP*DPGSRT
Trigger: AGTCCTACTGCCAGGATCGCATGGGAGAATCCTTGG...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCGTACCCGGCCTTTGCTaGTTTCCCTGCTTCATACAA +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGVPGLC*FPCFIQ
Trigger: TTGTATGAAGCAGGGAAAGCAGCAAAGGCCGGGTAC...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR GCA 90 bp TTTATTTCTCACAGTTCTAGAATCTGGGAAGTCCAAGCTCAGTGCACCAATACAGCCAAGGGAGGTGGATaGGGCTTGTCCATCAGCATG +
Preference number: 4 (lower is better)
Translates to: FISHSSRIWEVQAQCTNTAKGGG*GLSISM
Trigger: CATGCTGATGGACAAGCCGCATCCACCTCCCTTGGC...TGTATTGGTGCACTGAGCTTGGACTTCCCAGATTCTAGAACTGTGAGAAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGTGGTGTTGTTATATCTaGCTCTCATCCTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGWCCYI*LSSFWL
Trigger: CAGCCAGAAGGATGAGAGGCAGATATAACAACACCA...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCAAGACTGGCGGAAATTaGTGTCCTCCTCATGTAGGG +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGKTGGN*CPPHVG
Trigger: CCCTACATGAGGAGGACAGCAATTTCCGCCAGTCTT...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGACACAGGGAACTGCTTaGTTCTCATCTGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGTQGTA*FSSDGK
Trigger: CTTTCCATCAGATGAGAAGCAAGCAGTTCCCTGTGT...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTGAGCGCGGCTGGCTGTaGCTGAAGCTCTCTCGATCC +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSERGWL*LKLSRS
Trigger: GGATCGAGAGAGCTTCAGGCACAGCCAGCCGCGCTC...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGAGCGCGGCTGGCTGTaGCTGAAGCTCTCTCGATCC +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIERGWL*LKLSRS
Trigger: GGATCGAGAGAGCTTCAGGCACAGCCAGCCGCGCTC...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCCGTATTTGGGTGCGGTaGCTGGCGTGCGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGRIWVR*LACGSP
Trigger: TGGTGAGCCGCACGCCAGGCACCGCACCCAAATACG...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATACGTATTTGGGTGCGGTaGCTGGCGTGCGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIRIWVR*LACGSP
Trigger: TGGTGAGCCGCACGCCAGGCACCGCACCCAAATACG...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGTGGTCGTATTTGGGTaGGGTGCCTGGCGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIVVVFG*GAWRAA
Trigger: AGCCGCACGCCAGGCACCGCACCCAAATACGACCAC...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGACTGCCTGCCATCCCTTaGCAAAGCAGAGATCAGCAA +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGLPAIP*QSRDQQ
Trigger: TTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAG...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp GAACTGGGATGGCAGAAACAATTAACGGCAAGTGAAGCACAAAACCGGAAAAGACATCTCCGTGAGGCCTaGCCTGTGTTGGTGAATATG +
Preference number: 4 (lower is better)
Translates to: ELGWQKQLTASEAQNRKRHLREA*PVLVNM
Trigger: CATATTCACCAACACAGGGCAGGCCTCACGGAGATG...TCTTTTCCGGTTTTGTGCTTCACTTGCCGTTAATTGTTTCTGCCATCCCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGAAAGTGGGAAATGGCTaGAACAGAAGGATCGCTGTC +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWKVGNG*NRRIAV
Trigger: GACAGCGATCCTTCTGTTCCAGCCATTTCCCACTTT...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp ACTATTCAGAAATATTTACAGATGTGGTCAGGTGCCTTGGGTTTGGGTGGCAGCCCCCTCCAGGTCATCTaGGGTGGTGATAATACAGTA +
Preference number: 4 (lower is better)
Translates to: TIQKYLQMWSGALGLGGSPLQVI*GGDNTV
Trigger: TACTGTATTATCACCACCCCAGATGACCTGGAGGGG...GCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTGCAGCAGCAGGAATCTaGGCAGCATGGGCAGCGGAC +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSAAAGI*AAWAAD
Trigger: GTCCGCTGCCCATGCTGCCCAGATTCCTGCTGCTGC...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTCTCATCCTTCTGGCTaGATCAAACTGAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGSHPSG*IKLSQL
Trigger: GAGCTGGCTCAGTTTGATCCAGCCAGAAGGATGAGA...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAACAGCATCTCCGACTTaGAGCGCGGCTGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGITASPT*SAAGCA
Trigger: GGCACAGCCAGCCGCGCTCCAAGTCGGAGATGCTGT...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCACAGCATCTCCGACTTaGAGCGCGGCTGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGTASPT*SAAGCA
Trigger: GGCACAGCCAGCCGCGCTCCAAGTCGGAGATGCTGT...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGACGAGTGGTCGTATTTaGGTGCGGTGCCTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWTSGRI*VRCLAC
Trigger: GCACGCCAGGCACCGCACCCAAATACGACCACTCGT...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGAGTCATTGGTTTTCTTaGCGGGCTCCTTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGSHWFS*RAPFSS
Trigger: AGAGGAAAAAGGAGCCCGCCAAGAAAACCAATGACT...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCAAGGGACATCCTGGTTaGAAAGTCATTGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVKGHPG*KVIGFL
Trigger: AAGAAAACCAATGACTTTCCAACCAGGATGTCCCTT...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATCTCAAACTAGTTAGATaGGCACAGAGGTTTGAAATC +
Preference number: 4 (lower is better)
Translates to: QPPLKAACHPLPKQRSANLKLVR*AQRFEI
Trigger: GATTTCAAACCTCTGTGCCCATCTAACTAGTTTGAG...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp GAACTGGGATGGCAGAAACAATTAACGGCAAGTGAAGCACAAAACCGGAAAAGACTAGCCCCAGTAGGGTaGCTCTGGAGAAGACCAAAA +
Preference number: 4 (lower is better)
Translates to: ELGWQKQLTASEAQNRKRLAPVG*LWRRPK
Trigger: TTTTGGTCTTCTCCAGAGCCACCCTACTGGGGCTAG...TCTTTTCCGGTTTTGTGCTTCACTTGCCGTTAATTGTTTCTGCCATCCCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCTCACTGTTCTGGGAATaGAAATATCTACAACAGCCT +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVSLFWE*KYLQQP
Trigger: AGGCTGTTGTAGATATTTCCATTCCCAGAACAGTGA...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CTGGTTTGCAGACAGATACCTTGCTGTATCCTCACATGGCAGAGAAAGAGAGGACAGTATCTGTCTTCATaGCTTCGCCACATCCATGAC +
Preference number: 4 (lower is better)
Translates to: LVCRQIPCCILTWQRKRGQYLSS*LRHIHD
Trigger: GTCATGGATGTGGCGAAGCCATGAAGACAGATACTG...TCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCGAATGTTACAGTCTGTaGAGAGCAGTAAGAGTGACA +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIECYSL*RAVRVT
Trigger: TGTCACTCTTACTGCTCTCCACAGACTGTAACATTC...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGCCACAAGGGACATCCTaGTTGGAAAGTCATTCTGTG +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWPQGTS*LESHSV
Trigger: CACAGAATGACTTTCCAACCAGGATGTCCCTTGTGG...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469934.6
CDS-3UTR CCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGAAGGGACATCCTGGTTaGAAAGTCATTCCAACACCA +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGKGHPG*KVIPTP
Trigger: TGGTGTTGGAATGACTTTCCAACCAGGATGTCCCTT...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529387.5
CDS-3UTR TCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATCGGGCACTGTGACCTaGAGGCCTTCGACCATGGCT +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKSGTVT*RPSTMA
Trigger: AGCCATGGTCGAAGGCCTTCAGGTCACAGTGCCCGA...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTTCGGGCACTGTGACCTaGAGGCCTTCGACCATGGCT +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSSGTVT*RPSTMA
Trigger: AGCCATGGTCGAAGGCCTTCAGGTCACAGTGCCCGA...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp CCATCCAATACTGGAAGGTTAGCAATAGAGTCACTCTCTTGGATGTGTGCCACTTGCTTGCTTCTCATCTaGTGGAAAGACTGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: PSNTGRLAIESLSWMCATCLLLI*WKDWRK
Trigger: TTTCCGCCAGTCTTTCCATCAGATGAGAAGCAAGCA...AGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTAGCGGCTGGCTGTGCCTaGAGCTCTCTCGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLAAGCA*SSLDPL
Trigger: AAGAGGATCGAGAGAGCTTCAGGCACAGCCAGCCGC...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAGCGGCTGGCTGTGCCTaGAGCTCTCTCGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKAAGCA*SSLDPL
Trigger: AAGAGGATCGAGAGAGCTTCAGGCACAGCCAGCCGC...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTGCGGCTGGCTGTGCCTaGAGCTCTCTCGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSAAGCA*SSLDPL
Trigger: AAGAGGATCGAGAGAGCTTCAGGCACAGCCAGCCGC...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp AGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATGTCAGGTATATTTTGACTTaGAGCTATCTTCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: RSWACWFLDLCLVPVVHVRYILT*SYLPLS
Trigger: TGACAAGGGAAGATAGCTTCAAGTCAAAATATACCT...GACATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCAGGTATATTTTGACTTaGAGCTATCTTCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVRYILT*SYLPLS
Trigger: TGACAAGGGAAGATAGCTTCAAGTCAAAATATACCT...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTCCCTGGGAGTGCTCCTaGCACTCCTTTCTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSPWECS*HSFLSA
Trigger: GGCAGAGAGAAAGGAGTGTCAGGAGCACTCCCAGGG...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp AGGAGAAGAAACAAAAGGACACATAGAGGAAAGTCAGGGGTGCTGAGGACAAGACTTGAGCTAGGAGTTTaGGACTGCAGTGAGCTGATA +
Preference number: 4 (lower is better)
Translates to: RRRNKRTHRGKSGVLRTRLELGV*DCSELI
Trigger: TATCAGCTCACTGCAGTCTCAAACTCCTAGCTCAAG...TCTTGTCCTCAGCACCCCTGACTTTCCTCTATGTGTCCTTTTGTTTCTTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp AGGAGAAGAAACAAAAGGACACATAGAGGAAAGTCAGGGGTGCTGAGGACAAGAAATCTGGAATTCCCTTaGGAGGGCTTAGCCATCCAA +
Preference number: 4 (lower is better)
Translates to: RRRNKRTHRGKSGVLRTRNLEFP*EGLAIQ
Trigger: TTGGATGGCTAAGCCCTCTCAAGGGAATTCCAGATT...TCTTGTCCTCAGCACCCCTGACTTTCCTCTATGTGTCCTTTTGTTTCTTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CAGAAGAATCCAGGGAGGAGACGAAAGGTCCTAATGAAGGCAGTGACACAGAGATCATCTTTGTACAGCTaGAGACTAGGGAATGGACTA +
Preference number: 4 (lower is better)
Translates to: QKNPGRRRKVLMKAVTQRSSLYS*RLGNGL
Trigger: TAGTCCATTCCCTAGTCTTCAGCTGTACAAAGATGA...TCTCTGTGTCACTGCCTTCATTAGGACCTTTCGTCTCCTCCCTGGATTCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp ATAGGGTCTAGCCCCAGTAGGGTGGCTCTGGAGAAGACCAAAAGGATGGTAAAGGATCTCTCTAATAGATaGGCTCCATTTCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: IGSSPSRVALEKTKRMVKDLSNR*APFLLF
Trigger: GAAAAGGAGAAATGGAGCTCATCTATTAGAGAGATC...CTTTACCATCCTTTTGGTCTTCTCCAGAGCCACCCTACTGGGGCTAGACCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCACATCTCTGGCCACATaGTTAGCTCAGATATGGGCA +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGTSLAT*LAQIWA
Trigger: TGCCCATATCTGAGCTAATCATGTGGCCAGAGATGT...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCCTCGAACAGTCCTCCTaGTGTCCAAACAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGLEQSS*CPNNPS
Trigger: ACTTGGATTGTTTGGACAGCAGGAGGACTGTTCGAG...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTCAAGCAGCCCTGTCCTaGCCAACACCAGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSQAALS*PTPAVP
Trigger: TGGAACTGCTGGTGTTGGGCAGGACAGGGCTGCTTG...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000526687.1
ENST00000528703.5
CDS-3UTR GCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGCAAGCAGCCCTGTCCTaGCCAACACCAGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWQAALS*PTPAVP
Trigger: TGGAACTGCTGGTGTTGGGCAGGACAGGGCTGCTTG...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000526687.1
ENST00000528703.5
CDS-3UTR GCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTGCCAAGGGAGGTGGATaGGGCTTGTCCATCAGCATG +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSAKGGG*GLSISM
Trigger: CATGCTGATGGACAAGCCGCATCCACCTCCCTTGGC...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR GCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATGCCAAGGGAGGTGGATaGGGCTTGTCCATCAGCATG +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNAKGGG*GLSISM
Trigger: CATGCTGATGGACAAGCCGCATCCACCTCCCTTGGC...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR GCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCCGTATTTGGGTGCGGTaGCTGGCGTGCGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFRIWVR*LACGSP
Trigger: TGGTGAGCCGCACGCCAGGCACCGCACCCAAATACG...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGAGGAAAGTGGGAAATaGCTGGAACAGAAGGATCGC +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGEESGK*LEQKDR
Trigger: GCGATCCTTCTGTTCCAGCCATTTCCCACTTTCCTC...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCGCAGCAGCAGGAATCTaGGCAGCATGGGCAGCGGAC +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFAAAGI*AAWAAD
Trigger: GTCCGCTGCCCATGCTGCCCAGATTCCTGCTGCTGC...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAGACTTGGAGCGCGGCTaGCTGTGCCTGAAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKDLERG*LCLKLS
Trigger: AGAGAGCTTCAGGCACAGCCAGCCGCGCTCCAAGTC...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTAGACTTGGAGCGCGGCTaGCTGTGCCTGAAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLDLERG*LCLKLS
Trigger: AGAGAGCTTCAGGCACAGCCAGCCGCGCTCCAAGTC...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGACTTGGAGCGCGGCTaGCTGTGCCTGAAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIDLERG*LCLKLS
Trigger: AGAGAGCTTCAGGCACAGCCAGCCGCGCTCCAAGTC...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCACAGCATCTCCGACTTaGAGCGCGGCTGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFTASPT*SAAGCA
Trigger: GGCACAGCCAGCCGCGCTCCAAGTCGGAGATGCTGT...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCACGAGTGGTCGTATTTaGGTGCGGTGCCTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGTSGRI*VRCLAC
Trigger: GCACGCCAGGCACCGCACCCAAATACGACCACTCGT...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAACGAGTGGTCGTATTTaGGTGCGGTGCCTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKTSGRI*VRCLAC
Trigger: GCACGCCAGGCACCGCACCCAAATACGACCACTCGT...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAACGAGTGGTCGTATTTaGGTGCGGTGCCTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGITSGRI*VRCLAC
Trigger: GCACGCCAGGCACCGCACCCAAATACGACCACTCGT...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGCTGCCCAGGTACGAGTaGTCGTATTTGGGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWLPRYE*SYLGAV
Trigger: CACCGCACCCAAATACGACCACTCGTACCTGGGCAG...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAAGGGACATCCTGGTTaGAAAGTCATTGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIKGHPG*KVIGFL
Trigger: AAGAAAACCAATGACTTTCCAACCAGGATGTCCCTT...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCCTCAAACTAGTTAGATaGGCACAGAGGTTTGAAATC +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEILKLVR*AQRFEI
Trigger: GATTTCAAACCTCTGTGCCCATCTAACTAGTTTGAG...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCGGCATAGGCAATTTCTaGAGTTTAGCAGTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGGIGNF*SLAVQS
Trigger: GCTCTGGACTGCTAAACTCCAGAAATTGCCTATGCC...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp AGGAGAAGAAACAAAAGGACACATAGAGGAAAGTCAGGGGTGCTGAGGACAAGACTTTTCCATCTGAACTaGGGTCCAAACAGACAGGCT +
Preference number: 4 (lower is better)
Translates to: RRRNKRTHRGKSGVLRTRLFHLN*GPNRQA
Trigger: AGCCTGTCTGTTTGGACCCCAGTTCAGATGGAAAAG...TCTTGTCCTCAGCACCCCTGACTTTCCTCTATGTGTCCTTTTGTTTCTTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGTGAACGTGCTTGGATaGAATAGCTGCCATGCACCA +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGVNVLG*NSCHAP
Trigger: TGGTGCATGGCAGCTATTCCATCCAAGCACGTTCAC...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CCATCCAATACTGGAAGGTTAGCAATAGAGTCACTCTCTTGGATGTGTGCCACTGCAACAAAAAGAGGCTaGGAGGGTGGGGTTGTATAT +
Preference number: 4 (lower is better)
Translates to: PSNTGRLAIESLSWMCATATKRG*EGGVVY
Trigger: ATATACAACCCCACCCTCCCAGCCTCTTTTTGTTGC...AGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCACTCTCTTCTCTCTTTaGAGAAATCTTCCTATCCCA +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEITLFSL*RNLPIP
Trigger: TGGGATAGGAAGATTTCTCCAAAGAGAGAAGAGAGT...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGATGTCCCCTGTTCTATaGAACTTAGAGAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWMSPVL*NLERKG
Trigger: TCCCTTCCTCTCTAAGTTCCATAGAACAGGGGACAT...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CAA 72 bp CAGAAATATTTACAGATGTGGTCAGGTGCCTTGGGTTaGGGTGGCAGCCTTTTCTCATCTCCAGTATGCCTA +
Preference number: 4 (lower is better)
Translates to: QKYLQMWSGALG*GGSLFSSPVCL
Trigger: TAGGCATACTGGAGATGAGAAAAGGCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGCTGATGGGAGGATGTTaGGAAGTGGCAGCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWLMGGC*EVAAKH
Trigger: GTGCTTCGCTGCCACTTCTCAACATCCTCCCATCAG...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATCTGATGGGAGGATGTTaGGAAGTGGCAGCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNLMGGC*EVAAKH
Trigger: GTGCTTCGCTGCCACTTCTCAACATCCTCCCATCAG...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGTCACAGCCAGACTTCTaGGTGACTCACCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWSQPDF*VTHHSQ
Trigger: CTGGCTGTGGTGAGTCACTCAGAAGTCTGGCTGTGA...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp ATAGGGTCTAGCCCCAGTAGGGTGGCTCTGGAGAAGACCAAAAGGATGGTAAAGAATCTTAACAGAACTTaGAATGTCCTCCCACGAATA +
Preference number: 4 (lower is better)
Translates to: IGSSPSRVALEKTKRMVKNLNRT*NVLPRI
Trigger: TATTCGTGGGAGGACATTTCAAGTTCTGTTAAGATT...CTTTACCATCCTTTTGGTCTTCTCCAGAGCCACCCTACTGGGGCTAGACCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGAAGAGACAGAGAGATTaGTTCATCTTTGTACAGCTG +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGKRQRD*FIFVQL
Trigger: CAGCTGTACAAAGATGAATCAATCTCTCTGTCTCTT...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAACAAGCAGCCCTGTCCTaGCCAACACCAGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKQAALS*PTPAVP
Trigger: TGGAACTGCTGGTGTTGGGCAGGACAGGGCTGCTTG...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000526687.1
ENST00000528703.5
CDS-3UTR GCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCGCTTGTCCATCAGCATaGCAGATGAGGGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGACPSA*QMRGLL
Trigger: GAGGAGCCCCCTCATCTGGCATGCTGATGGACAAGC...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR GCA 90 bp AGGAGAAGAAACAAAAGGACACATAGAGGAAAGTCAGGGGTGCTGAGGACAAGAACACAGGGAACTGCTTaGTTCTCATCTGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: RRRNKRTHRGKSGVLRTRTQGTA*FSSDGK
Trigger: CTTTCCATCAGATGAGAAGCAAGCAGTTCCCTGTGT...TCTTGTCCTCAGCACCCCTGACTTTCCTCTATGTGTCCTTTTGTTTCTTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp AATCCAGATGAATCTGTCGTTTCATTCAGAAACTTCTCTGCAAGAAGGATTCTCTCTTCTTCTCCGAGTTaGTGTGGTAGGGCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: NPDESVVSFRNFSARRILSSSPS*CGRAGR
Trigger: GCGACCTGCCCTACCACAGCAACTCGGAGAAGAAGA...GAGAATCCTTCTTGCAGAGAAGTTTCTGAATGAAACGACAGATTCATCTGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGTCTTCTTCTCCGAGTTaGTGTGGTAGGGCAGGTCGC +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWSSSPS*CGRAGR
Trigger: GCGACCTGCCCTACCACAGCAACTCGGAGAAGAAGA...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp GAACTGGGATGGCAGAAACAATTAACGGCAAGTGAAGCACAAAACCGGAAAAGAAGAAGGTCCTGGGCCTaGTGGTTCTTAGATTTGTGT +
Preference number: 4 (lower is better)
Translates to: ELGWQKQLTASEAQNRKRRRSWA*WFLDLC
Trigger: ACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCT...TCTTTTCCGGTTTTGTGCTTCACTTGCCGTTAATTGTTTCTGCCATCCCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATCCCTTAAAGGCTGCCTaGCATCCCTTGCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNPLKAA*HPLPKQ
Trigger: CTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGG...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATGCCTCCCTTAAAGGCTaGCTGCCATCCCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNASLKG*LPSLAK
Trigger: TTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGC...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTCCACTCCACAAGAGTaGAGGGTGAAAAGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGSTPQE*RVKSFD
Trigger: ATCAAAGCTTTTCACCCTGCACTCTTGTGGAGTGGA...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp AGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATGTCAATATTCTCCAAAATTaGCTGAGCAAGTTGAAATCC +
Preference number: 4 (lower is better)
Translates to: RSWACWFLDLCLVPVVHVNILQN*LSKLKS
Trigger: GGATTTCAACTTGCTCAGGCAATTTTGGAGAATATT...GACATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGGGTCTCTGCAGCTGGTaGTATGAGGCTCTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWGLCSW*YEALWW
Trigger: CCACCAAAGAGCCTCATAGCACCAGCTGCAGAGACC...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp ACTATTCAGAAATATTTACAGATGTGGTCAGGTGCCTTGGGTTTGGGTGGCAGCCTCCCAAAGGCCTCATaGCCAAATACCATCACATTA +
Preference number: 4 (lower is better)
Translates to: TIQKYLQMWSGALGLGGSLPKAS*PNTITL
Trigger: TAATGTGATGGTATTTGGGCATGAGGCCTTTGGGAG...GCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTGGGCTGGAAGAGCATaGCCACCTTCTTCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNWAGRA*PPSSCR
Trigger: CCGACAAGAAGAAGGTGGCCATGCTCTTCCAGCCCA...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGTGGGCTGGAAGAGCATaGCCACCTTCTTCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWWAGRA*PPSSCR
Trigger: CCGACAAGAAGAAGGTGGCCATGCTCTTCCAGCCCA...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTACGAAGCACAGTGGGCTaGAAGAGCATGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLRSTVG*KSMATF
Trigger: GAAGGTGGCCATGCTCTTCCAGCCCACTGTGCTTCG...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATCTCTTGCTGAGAGATTaGGCCCGGGTAGAGGACATG +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNLLLRD*ARVEDM
Trigger: CATGTCCTCTACCCGGGCCCAATCTCTCAGCAAGAG...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGCTCTTGCTGAGAGATTaGGCCCGGGTAGAGGACATG +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWLLLRD*ARVEDM
Trigger: CATGTCCTCTACCCGGGCCCAATCTCTCAGCAAGAG...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGAATCTGGGCAGCATaGGCAGCGGACATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIGIWAA*AADIAA
Trigger: TGCTGCTATGTCCGCTGCCCATGCTGCCCAGATTCC...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAGGAATCTGGGCAGCATaGGCAGCGGACATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKGIWAA*AADIAA
Trigger: TGCTGCTATGTCCGCTGCCCATGCTGCCCAGATTCC...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTTGGTGCCAAGGGAGGTaGATGCGGCTTGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSWCQGR*MRLVHQ
Trigger: CTGATGGACAAGCCGCATCCACCTCCCTTGGCACCA...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATCTTTGTTATACTCCATaGCTGAGGGCCCGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNLCYTP*LRARGL
Trigger: CAAGCCGCGGGCCCTCAGCCATGGAGTATAACAAAG...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTGACTTGGAGCGCGGCTaGCTGTGCCTGAAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCDLERG*LCLKLS
Trigger: AGAGAGCTTCAGGCACAGCCAGCCGCGCTCCAAGTC...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTACTGCCCAGGTACGAGTaGTCGTATTTGGGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLLPRYE*SYLGAV
Trigger: CACCGCACCCAAATACGACCACTCGTACCTGGGCAG...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTCTGCCCAGGTACGAGTaGTCGTATTTGGGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSLPRYE*SYLGAV
Trigger: CACCGCACCCAAATACGACCACTCGTACCTGGGCAG...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp ACTATTCAGAAATATTTACAGATGTGGTCAGGTGCCTTGGGTTTGGGTGGCAGCAGTCATTGGTTTTCTTaGCGGGCTCCTTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TIQKYLQMWSGALGLGGSSHWFS*RAPFSS
Trigger: AGAGGAAAAAGGAGCCCGCCAAGAAAACCAATGACT...GCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGCTCAAACTAGTTAGATaGGCACAGAGGTTTGAAATC +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGLKLVR*AQRFEI
Trigger: GATTTCAAACCTCTGTGCCCATCTAACTAGTTTGAG...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCATGGCAGAACTGGGATaGCAGAAACAATTAACGGCA +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGMAELG*QKQLTA
Trigger: TGCCGTTAATTGTTTCTGCCATCCCAGTTCTGCCAT...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CTGGTTTGCAGACAGATACCTTGCTGTATCCTCACATGGCAGAGAAAGAGAGGAAAGTGGGAGTGCTATTaGCCAGTCATCCTTATGATT +
Preference number: 4 (lower is better)
Translates to: LVCRQIPCCILTWQRKRGKWECY*PVILMI
Trigger: AATCATAAGGATGACTGGCCAATAGCACTCCCACTT...TCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp AGGAGAAGAAACAAAAGGACACATAGAGGAAAGTCAGGGGTGCTGAGGACAAGAAAGGCCACTAAAATCTaGAATTCCCTTGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RRRNKRTHRGKSGVLRTRKATKI*NSLERA
Trigger: AGCCCTCTCAAGGGAATTCCAGATTTTAGTGGCCTT...TCTTGTCCTCAGCACCCCTGACTTTCCTCTATGTGTCCTTTTGTTTCTTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCTATATTCCTGCCTTTTaGAGTAAGTCTATCCTCACT +
Preference number: 4 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIYIPAF*SKSILT
Trigger: AGTGAGGATAGACTTACTCCAAAAGGCAGGAATATA...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCAGCCTTTTGCCTGCTTaGTCAAATGAGCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGSLLPA*SNELES
Trigger: ACTTTCCAGCTCATTTGACCAAGCAGGCAAAAGGCT...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTGGAAGCCGGAAAGGCTaGTTGTTCAGGGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSGSRKG*LFRALW
Trigger: CCACAGAGCCCTGAACAACCAGCCTTTCCGGCTTCC...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGACCACAAGGGACATCCTaGTTGGAAAGTCATTCCAAC +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGPQGTS*LESHSN
Trigger: GTTGGAATGACTTTCCAACCAGGATGTCCCTTGTGG...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529387.5
CDS-3UTR TCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAACTGATGGGAGGATGTTaGGAAGTGGCAGCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKLMGGC*EVAAKH
Trigger: GTGCTTCGCTGCCACTTCTCAACATCCTCCCATCAG...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTCCTGGCAGTAGGACTTaGACTTCCACTGCACAACTG +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSPGSRT*TSTAQL
Trigger: CAGTTGTGCAGTGGAAGTTCAAGTCCTACTGCCAGG...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp TTATCCAGAGAAATGTTGACAACATCAGACCACAAGGGACATCCTGGTTGGAAACATCATGAACAATCGTaGTCTCTCTGCCCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LSREMLTTSDHKGHPGWKHHEQS*SLCPCR
Trigger: TCTACAGGGGCAGAGAGATCACGATTGTTCATGATG...TTTCCAACCAGGATGTCCCTTGTGGTCTGATGTTGTCAACATTTCTCTGGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529387.5
CDS-3UTR TCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGCTGGCTGGATCAAACTaGGCCAGCTCCTTCTCAACA +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWLAGSN*ASSFST
Trigger: TGTTGAGAAGGAGCTGGCTCAGTTTGATCCAGCCAG...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATCACTGCTGCCTCCCATaGCACCTGACCAATAGTCAG +
Preference number: 4 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNHCCLP*HLTNSQ
Trigger: CTGACTATTGGTCAGGTGTCATGGGAGGCAGCAGTG...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATACACTGCTGCCTCCCATaGCACCTGACCAATAGTCAG +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIHCCLP*HLTNSQ
Trigger: CTGACTATTGGTCAGGTGTCATGGGAGGCAGCAGTG...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAACACTGCTGCCTCCCATaGCACCTGACCAATAGTCAG +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKHCCLP*HLTNSQ
Trigger: CTGACTATTGGTCAGGTGTCATGGGAGGCAGCAGTG...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp CAGAAGAATCCAGGGAGGAGACGAAAGGTCCTAATGAAGGCAGTGACACAGAGAAGGTATATTTTGACTTaGAGCTATCTTCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: QKNPGRRRKVLMKAVTQRRYILT*SYLPLS
Trigger: TGACAAGGGAAGATAGCTTCAAGTCAAAATATACCT...TCTCTGTGTCACTGCCTTCATTAGGACCTTTCGTCTCCTCCCTGGATTCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CTGGTTTGCAGACAGATACCTTGCTGTATCCTCACATGGCAGAGAAAGAGAGGAAGTTCTGAATCCAGATaGATCTGTCGTTTCATTCAG +
Preference number: 4 (lower is better)
Translates to: LVCRQIPCCILTWQRKRGSSESR*ICRFIQ
Trigger: CTGAATGAAACGACAGATTCATCTGGATTCAGAACT...TCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp ATAAATTCATATGTAGCTTTTCCCTTAAGTAATGTGAGGCACACCTCCATCCAAAGGCACAAAGACAACTaGCAGGTGGCCCTCACGAAG +
Preference number: 4 (lower is better)
Translates to: INSYVAFPLSNVRHTSIQRHKDN*QVALTK
Trigger: CTTCGTGAGGGCCACCTGTCAGTTGTCTTTGTGCCT...TTGGATGGAGGTGTGCCTCACATTACTTAAGGGAAAAGCTACATATGAATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTAGAGCTCCACCCTACTaGCCTAATCACCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSRAPPY*PNHLPK
Trigger: CTTTGGGAGGTGATTAGGTCAGTAGGGTGGAGCTCT...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTACCTTTGCGAAAGGCTTaGGGGCAGCAGCAGGAATCT +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLPLRKA*GQQQES
Trigger: AGATTCCTGCTGCTGCCCTCAAGCCTTTCGCAAAGG...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528703.5
CDS-3UTR GCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTCCAAGGATTCTCCCATaGGATCCTGGCAGTAGGACT +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSPRILP*DPGSRT
Trigger: AGTCCTACTGCCAGGATCGCATGGGAGAATCCTTGG...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAACACAGGGAACTGCTTaGTTCTCATCTGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGTQGTA*FSSDGK
Trigger: CTTTCCATCAGATGAGAAGCAAGCAGTTCCCTGTGT...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCCCCTTAAAGGCTGCCTaGCATCCCTTGCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGPLKAA*HPLPKQ
Trigger: CTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGG...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTGCCTCCCTTAAAGGCTaGCTGCCATCCCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSASLKG*LPSLAK
Trigger: TTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGC...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp CTGGTTTGCAGACAGATACCTTGCTGTATCCTCACATGGCAGAGAAAGAGAGGAAATGAACATAAAGAATaGACCAACTTCTCACGCCTC +
Preference number: 4 (lower is better)
Translates to: LVCRQIPCCILTWQRKRGNEHKE*TNFSRL
Trigger: GAGGCGTGAGAAGTTGGTGCATTCTTTATGTTCATT...TCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp ATAGGGTCTAGCCCCAGTAGGGTGGCTCTGGAGAAGACCAAAAGGATGGTAAAGCAAAAACAGATTTTCTaGTTGACAAGGCCACTAAAA +
Preference number: 4 (lower is better)
Translates to: IGSSPSRVALEKTKRMVKQKQIF*LTRPLK
Trigger: TTTTAGTGGCCTTGTCAAGCAGAAAATCTGTTTTTG...CTTTACCATCCTTTTGGTCTTCTCCAGAGCCACCCTACTGGGGCTAGACCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp AGGAGAAGAAACAAAAGGACACATAGAGGAAAGTCAGGGGTGCTGAGGACAAGAATGAGAAAAGCTAGGTaGCTAAGTCATACCAGCAAC +
Preference number: 4 (lower is better)
Translates to: RRRNKRTHRGKSGVLRTRMRKAR*LSHTSN
Trigger: GTTGCTGGTATGACTTAGGCACCTAGCTTTTCTCAT...TCTTGTCCTCAGCACCCCTGACTTTCCTCTATGTGTCCTTTTGTTTCTTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGTCCTTTTCCTGGTTTaGAGACAGATACCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGVLFLV*RQIPCC
Trigger: ACAGCAAGGTATCTGTCTGCAAACCAGGAAAAGGAC...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATTGGGCTGGAAGAGCATaGCCACCTTCTTCTTGTCGG +
Preference number: 4 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNWAGRA*PPSSCR
Trigger: CCGACAAGAAGAAGGTGGCCATGCTCTTCCAGCCCA...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCCGAAGCACAGTGGGCTaGAAGAGCATGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFRSTVG*KSMATF
Trigger: GAAGGTGGCCATGCTCTTCCAGCCCACTGTGCTTCG...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTACTCTTGCTGAGAGATTaGGCCCGGGTAGAGGACATG +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLLLLRD*ARVEDM
Trigger: CATGTCCTCTACCCGGGCCCAATCTCTCAGCAAGAG...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTCTCTTGCTGAGAGATTaGGCCCGGGTAGAGGACATG +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSLLLRD*ARVEDM
Trigger: CATGTCCTCTACCCGGGCCCAATCTCTCAGCAAGAG...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTGGAATCTGGGCAGCATaGGCAGCGGACATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCGIWAA*AADIAA
Trigger: TGCTGCTATGTCCGCTGCCCATGCTGCCCAGATTCC...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTGGTGCCAAGGGAGGTaGATGCGGCTTGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFWCQGR*MRLVHQ
Trigger: CTGATGGACAAGCCGCATCCACCTCCCTTGGCACCA...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTTCCAGTGGAGTCACTTaGTGCCAAGGGAGGTGGATG +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSSSGVT*CQGRWM
Trigger: CATCCACCTCCCTTGGCACCAAGTGACTCCACTGGA...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAACTTTGTTATACTCCATaGCTGAGGGCCCGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKLCYTP*LRARGL
Trigger: CAAGCCGCGGGCCCTCAGCCATGGAGTATAACAAAG...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATCTTTGTTATACTCCATaGCTGAGGGCCCGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNLCYTP*LRARGL
Trigger: CAAGCCGCGGGCCCTCAGCCATGGAGTATAACAAAG...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCCTTTGTTATACTCCATaGCTGAGGGCCCGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGLCYTP*LRARGL
Trigger: CAAGCCGCGGGCCCTCAGCCATGGAGTATAACAAAG...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATGGCCAGAGAAGGTCCTaGGCCTGCTGGTTCTTAGAT +
Preference number: 4 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNGQRRS*ACWFLD
Trigger: ATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAGGCCAGAGAAGGTCCTaGGCCTGCTGGTTCTTAGAT +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKGQRRS*ACWFLD
Trigger: ATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCCAGAGAAGGTCCTaGGCCTGCTGGTTCTTAGAT +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIGQRRS*ACWFLD
Trigger: ATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTAGGCCAGAGAAGGTCCTaGGCCTGCTGGTTCTTAGAT +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLGQRRS*ACWFLD
Trigger: ATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGCATGCACCAGGTCCATaGCCATTGTCTCCAACTTCC +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWHAPGP*PLSPTS
Trigger: GGAAGTTGGAGACAATGGCCATGGACCTGGTGCATG...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAACCAAGGACATTCACTaGTATATGGAAGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGTKDIH*YMEGSG
Trigger: ACCAGAGCCTTCCATATACCAGTGAATGTCCTTGGT...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCGTAACCTTTGCGAACTaGCATAATCTCCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGVTFAN*HNLHSK
Trigger: TTTGCTGTGGAGATTATGCCAGTTCGCAAAGGTTAC...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526687.1
CDS-3UTR TCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAACCTGGCAGTAGGACTTaGACTTCCACTGCACAACTG +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKPGSRT*TSTAQL
Trigger: CAGTTGTGCAGTGGAAGTTCAAGTCCTACTGCCAGG...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCAGAAATCTCCCAGGGTaGCAGTCGAGCCCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGRNLPG*QSSPVL
Trigger: CAAAACAGGGCTCGACTGTCACCCTGGGAGATTTCT...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAAGAAATCTCCCAGGGTaGCAGTCGAGCCCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIRNLPG*QSSPVL
Trigger: CAAAACAGGGCTCGACTGTCACCCTGGGAGATTTCT...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTAAGAAATCTCCCAGGGTaGCAGTCGAGCCCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLRNLPG*QSSPVL
Trigger: CAAAACAGGGCTCGACTGTCACCCTGGGAGATTTCT...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTACACCAGCAGTTCCACTaGGTCCTCATTTTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLHQQFH*VLIFPL
Trigger: GAGGGGAAAAATGAGGACTCAGTGGAACTGCTGGTG...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATACACCAGCAGTTCCACTaGGTCCTCATTTTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIHQQFH*VLIFPL
Trigger: GAGGGGAAAAATGAGGACTCAGTGGAACTGCTGGTG...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAACACCAGCAGTTCCACTaGGTCCTCATTTTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKHQQFH*VLIFPL
Trigger: GAGGGGAAAAATGAGGACTCAGTGGAACTGCTGGTG...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTCTGGCTGGATCAAACTaGGCCAGCTCCTTCTCAACA +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSLAGSN*ASSFST
Trigger: TGTTGAGAAGGAGCTGGCTCAGTTTGATCCAGCCAG...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTGCAAATCTTCCAAGGTaGTGGCCAGAGAAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSANLPR*WPEKVL
Trigger: CAGGACCTTCTCTGGCCATCACCTTGGAAGATTTGC...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTAGCAAATCTTCCAAGGTaGTGGCCAGAGAAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLANLPR*WPEKVL
Trigger: CAGGACCTTCTCTGGCCATCACCTTGGAAGATTTGC...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp GAACTGGGATGGCAGAAACAATTAACGGCAAGTGAAGCACAAAACCGGAAAAGAAAAACCGGAAAAGACTaGGTGAAGTTTGTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: ELGWQKQLTASEAQNRKRKTGKD*VKFVGE
Trigger: TTCACCCACAAACTTCACTCAGTCTTTTCCGGTTTT...TCTTTTCCGGTTTTGTGCTTCACTTGCCGTTAATTGTTTCTGCCATCCCAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTTGCCCCTCTTGGAAATaGGCTAGGTACCATCACCTT +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSCPSWK*ARYHHL
Trigger: AAGGTGATGGTACCTAGCTCATTTCCAAGAGGGGCA...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCCTTCCACTGCACAACTaGAGGCTGATGGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGLPLHN*RLMGGC
Trigger: ACATCCTCCCATCAGCCTGCAGTTGTGCAGTGGAAG...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTAAGGGTACCCGGCCTTTaGTGCTTTCCCTGCTTCATA +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLRVPGL*CFPCFI
Trigger: TATGAAGCAGGGAAAGCAGCAAAGGCCGGGTACCCT...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR GCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGGGTACCCGGCCTTTaGTGCTTTCCCTGCTTCATA +
Preference number: 4 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNRVPGL*CFPCFI
Trigger: TATGAAGCAGGGAAAGCAGCAAAGGCCGGGTACCCT...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR GCA 90 bp AAGTTTGGATGGATTAAGAGGTTCAGGGATGAACATTCAGACAAGAACGAGTCAACCAATAGTCAGGATTaGTCTCCAAGTCCCCAGACA +
Preference number: 4 (lower is better)
Translates to: KFGWIKRFRDEHSDKNESTNSQD*SPSPQT
Trigger: TGTCTGGGGACTTGGAGAGCAATCCTGACTATTGGT...TGACTCGTTCTTGTCTGAATGTTCATCCCTGAACCTCTTAATCCATCCAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATACTGCCTGCCATCCCTTaGCAAAGCAGAGATCAGCAA +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGILPAIP*QSRDQQ
Trigger: TTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAG...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCGTTCTCACACATTCTTaGTTTCTTGGTAAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGVLTHS*FLGKLL
Trigger: GAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAAC...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCCTTGGATGGAATAGCTaGCATGCACCAGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGLGWNS*HAPGPW
Trigger: CCATGGACCTGGTGCATGGCAGCTATTCCATCCAAG...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCATAGCACCACTGCACTaGACTGCACCATGGGCCACA +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFIAPLH*TAPWAT
Trigger: TGTGGCCCATGGTGCAGTGCAGTGCAGTGGTGCTAT...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGCCCCTCCAGGTCATCTaGGGTGGTGATAATACAGTA +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWPLQVI*GGDNTV
Trigger: TACTGTATTATCACCACCCCAGATGACCTGGAGGGG...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTTGTGGCTTCCTCCAGTaGAGTCACTTGGTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCCGFLQ*SHLVPR
Trigger: CCTTGGCACCAAGTGACTCCACTGGAGGAAGCCACA...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTTGCCTCTCATCCTTCTaGCTGGATCAAACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSCLSSF*LDQTEP
Trigger: TGGCTCAGTTTGATCCAGCCAGAAGGATGAGAGGCA...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTCTTTGTTATACTCCATaGCTGAGGGCCCGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCLCYTP*LRARGL
Trigger: CAAGCCGCGGGCCCTCAGCCATGGAGTATAACAAAG...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTGGCCAGAGAAGGTCCTaGGCCTGCTGGTTCTTAGAT +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCGQRRS*ACWFLD
Trigger: ATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp ACTATTCAGAAATATTTACAGATGTGGTCAGGTGCCTTGGGTTTGGGTGGCAGCCTCAAACTAGTTAGATaGGCACAGAGGTTTGAAATC +
Preference number: 4 (lower is better)
Translates to: TIQKYLQMWSGALGLGGSLKLVR*AQRFEI
Trigger: GATTTCAAACCTCTGTGCCCATCTAACTAGTTTGAG...GCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp ATAAATTCATATGTAGCTTTTCCCTTAAGTAATGTGAGGCACACCTCCATCCAACCCCATGTCCTAGAATaGCAGAACTGGGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: INSYVAFPLSNVRHTSIQPHVLE*QNWDGR
Trigger: TCTGCCATCCCAGTTCTGCCATTCTAGGACATGGGG...TTGGATGGAGGTGTGCCTCACATTACTTAAGGGAAAAGCTACATATGAATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGTTTGGTCTCTGCAGCTaGTGCTATGAGGCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWFGLCS*CYEALW
Trigger: CCAAAGAGCCTCATAGCACCAGCTGCAGAGACCAAA...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGTTTCTATTTCCCCAATaGCATCTTTTCCTTCTATTC +
Preference number: 4 (lower is better)
Translates to: LSFRIANGVLVLLREEAGFLFPQ*HLFLLF
Trigger: GAATAGAAGGAAAAGATGCCATTGGGGAAATAGAAA...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp AGGAGAAGAAACAAAAGGACACATAGAGGAAAGTCAGGGGTGCTGAGGACAAGAAGGACTTTATGTAGCTaGCCCCCTATTTTAGTGAAT +
Preference number: 4 (lower is better)
Translates to: RRRNKRTHRGKSGVLRTRRTLCS*PPILVN
Trigger: ATTCACTAAAATAGGGGGCCAGCTACATAAAGTCCT...TCTTGTCCTCAGCACCCCTGACTTTCCTCTATGTGTCCTTTTGTTTCTTCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTAAGTGAGGCTCTCAGCTaGGTTCAGTGGCTCATGTCT +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLSEALS*VQWLMS
Trigger: AGACATGAGCCACTGAACCCAGCTGAGAGCCTCACT...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGATCATTCACTCTTCCTaGCTTCCCCAGGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWIIHSS*LPQGCC
Trigger: ACAGCAACCCTGGGGAAGCCAGGAAGAGTGAATGAT...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATGCCTCCCTGAAGCCTTaGGTTGGAATAATACGTGTG +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNASLKP*VGIIRV
Trigger: CACACGTATTATTCCAACCCAAGGCTTCAGGGAGGC...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CAA 72 bp GTGGATGATGGACAGGGAATCTTAAATCTTACTACATaGAGACCCAGGTTTGTTCTCAGTTCCTACAGCTCT +
Preference number: 4 (lower is better)
Translates to: VDDGQGILNLTT*RPRFVLSSYSS
Trigger: AGAGCTGTAGGAACTGAGAACAAACCTGGGTCTCAATGTAGTAAGATTTAAGATTCCCTGTCCATCATCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTCCTGGCAGTAGGACTTaGACTTCCACTGCACAACTG +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCPGSRT*TSTAQL
Trigger: CAGTTGTGCAGTGGAAGTTCAAGTCCTACTGCCAGG...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp AATCCAGATGAATCTGTCGTTTCATTCAGAAACTTCTCTGCAAGAAGGATTCTCAGTCGAGCCCTGTTTTaGAGCTACTACTCGAACAGT +
Preference number: 4 (lower is better)
Translates to: NPDESVVSFRNFSARRILSRALF*SYYSNS
Trigger: ACTGTTCGAGTAGTAGCTTCAAAACAGGGCTCGACT...GAGAATCCTTCTTGCAGAGAAGTTTCTGAATGAAACGACAGATTCATCTGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTAGAAATCTCCCAGGGTaGCAGTCGAGCCCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCRNLPG*QSSPVL
Trigger: CAAAACAGGGCTCGACTGTCACCCTGGGAGATTTCT...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCAGAAATCTCCCAGGGTaGCAGTCGAGCCCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFRNLPG*QSSPVL
Trigger: CAAAACAGGGCTCGACTGTCACCCTGGGAGATTTCT...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTCATCATGAACAATCGTaGTCTCTCTGCCCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSHHEQS*SLCPCR
Trigger: TCTACAGGGGCAGAGAGATCACGATTGTTCATGATG...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTGCAAATCTTCCAAGGTaGTGGCCAGAGAAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCANLPR*WPEKVL
Trigger: CAGGACCTTCTCTGGCCATCACCTTGGAAGATTTGC...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTGTGAAGTCATTTCTGTaGTTGTCCCAGAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSVKSFL*LSQRSL
Trigger: CAGTGACCTCTGGGACAATCACAGAAATGACTTCAC...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGCCGGAAAAGACTGAGTaGAGTTTGTGGGTGAAATGG +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWPEKTE*SLWVKW
Trigger: CCATTTCACCCACAAACTTCACTCAGTCTTTTCCGG...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp ATAAATTCATATGTAGCTTTTCCCTTAAGTAATGTGAGGCACACCTCCATCCAAAGTTTGAGACTGCAGTaGGCTGATAGCACCACTGCA +
Preference number: 4 (lower is better)
Translates to: INSYVAFPLSNVRHTSIQSLRLQ*ADSTTA
Trigger: TGCAGTGGTGCTATCAGCTCACTGCAGTCTCAAACT...TTGGATGGAGGTGTGCCTCACATTACTTAAGGGAAAAGCTACATATGAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGTTGAGGCCAGGAGTTTaGGACAAGCCTGGGAAATAT +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWLRPGV*DKPGKY
Trigger: ATATTTCCCAGGCTTGTCTCAAACTCCTGGCCTCAA...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp AATCCAGATGAATCTGTCGTTTCATTCAGAAACTTCTCTGCAAGAAGGATTCTCCAGCTGCCAAAGGAATaGAACATAAGAGGCTATCGC +
Preference number: 4 (lower is better)
Translates to: NPDESVVSFRNFSARRILQLPKE*NIRGYR
Trigger: GCGATAGCCTCTTATGTTTCATTCCTTTGGCAGCTG...GAGAATCCTTCTTGCAGAGAAGTTTCTGAATGAAACGACAGATTCATCTGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTCTTCCACTGCACAACTaGAGGCTGATGGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCLPLHN*RLMGGC
Trigger: ACATCCTCCCATCAGCCTGCAGTTGTGCAGTGGAAG...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCCTTCCACTGCACAACTaGAGGCTGATGGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFLPLHN*RLMGGC
Trigger: ACATCCTCCCATCAGCCTGCAGTTGTGCAGTGGAAG...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTCTCGAACAGTCCTCCTaGTGTCCAAACAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSLEQSS*CPNNPS
Trigger: ACTTGGATTGTTTGGACAGCAGGAGGACTGTTCGAG...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGCTCGAACAGTCCTCCTaGTGTCCAAACAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWLEQSS*CPNNPS
Trigger: ACTTGGATTGTTTGGACAGCAGGAGGACTGTTCGAG...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAGTACCCGGCCTTTGCTaGTTTCCCTGCTTCATACAA +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKVPGLC*FPCFIQ
Trigger: TTGTATGAAGCAGGGAAAGCAGCAAAGGCCGGGTAC...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR GCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTGTACCCGGCCTTTGCTaGTTTCCCTGCTTCATACAA +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSVPGLC*FPCFIQ
Trigger: TTGTATGAAGCAGGGAAAGCAGCAAAGGCCGGGTAC...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR GCA 90 bp ATTGATGTAAAAACACAAGTAGGTGTGGATGATGGACAGGGAATCTTAAATCTTAGGGTACCCGGCCTTTaGTGCTTTCCCTGCTTCATA +
Preference number: 4 (lower is better)
Translates to: IDVKTQVGVDDGQGILNLRVPGL*CFPCFI
Trigger: TATGAAGCAGGGAAAGCAGCAAAGGCCGGGTACCCT...AAGATTTAAGATTCCCTGTCCATCATCCACACCTACTTGTGTTTTTACATCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp ATTGATGTAAAAACACAAGTAGGTGTGGATGATGGACAGGGAATCTTAAATCTTGGATCCGGTAACCTTTaGGAACACTGTGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: IDVKTQVGVDDGQGILNLGSGNL*EHCGFL
Trigger: GAGGAAGCCACAGTGTTCGCAAAGGTTACCGGATCC...AAGATTTAAGATTCCCTGTCCATCATCCACACCTACTTGTGTTTTTACATCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAAGACTGGCGGAAATTaGTGTCCTCCTCATGTAGGG +
Preference number: 4 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNKTGGN*CPPHVG
Trigger: CCCTACATGAGGAGGACAGCAATTTCCGCCAGTCTT...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTACCAATAGTCAGGATTaGTCTCCAAGTCCCCAGACA +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSTNSQD*SPSPQT
Trigger: TGTCTGGGGACTTGGAGAGCAATCCTGACTATTGGT...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATACCAATAGTCAGGATTaGTCTCCAAGTCCCCAGACA +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNTNSQD*SPSPQT
Trigger: TGTCTGGGGACTTGGAGAGCAATCCTGACTATTGGT...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTAGAAGGTCCTGGGCCTaGTGGTTCTTAGATTTGTGT +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSRRSWA*WFLDLC
Trigger: ACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCT...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGAAGGTCCTGGGCCTaGTGGTTCTTAGATTTGTGT +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWRRSWA*WFLDLC
Trigger: ACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCT...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCCTGCCTGCCATCCCTTaGCAAAGCAGAGATCAGCAA +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFLPAIP*QSRDQQ
Trigger: TTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAG...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp AGGAGAAGAAACAAAAGGACACATAGAGGAAAGTCAGGGGTGCTGAGGACAAGACAAACAAACAAAATTTaGTGGACGTGGTGGCATATA +
Preference number: 4 (lower is better)
Translates to: RRRNKRTHRGKSGVLRTRQTNKI*WTWWHI
Trigger: TATATGCCACCACGTCCAGCAAATTTTGTTTGTTTG...TCTTGTCCTCAGCACCCCTGACTTTCCTCTATGTGTCCTTTTGTTTCTTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATGAGGAAAGTGGGAAATaGCTGGAACAGAAGGATCGC +
Preference number: 4 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNEESGK*LEQKDR
Trigger: GCGATCCTTCTGTTCCAGCCATTTCCCACTTTCCTC...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCGAGGAAAGTGGGAAATaGCTGGAACAGAAGGATCGC +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGEESGK*LEQKDR
Trigger: GCGATCCTTCTGTTCCAGCCATTTCCCACTTTCCTC...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATCCCCTCCAGGTCATCTaGGGTGGTGATAATACAGTA +
Preference number: 4 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNPLQVI*GGDNTV
Trigger: TACTGTATTATCACCACCCCAGATGACCTGGAGGGG...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGTCTCCACAGCAAAACTaGGCAAGAGATCAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWSPQQN*ARDQQA
Trigger: TGCTTGCTGATCTCTTGCCCAGTTTTGCTGTGGAGA...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000526687.1
ENST00000528703.5
CDS-3UTR CCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCCCTTTGCGAACACTGTaGCTTCCTCCAGTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFPLRTL*LPPVES
Trigger: TGACTCCACTGGAGGAAGCCACAGTGTTCGCAAAGG...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTCCTTTGCGAACACTGTaGCTTCCTCCAGTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCPLRTL*LPPVES
Trigger: TGACTCCACTGGAGGAAGCCACAGTGTTCGCAAAGG...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATCTCATCCTTCTGGCTaGATCAAACTGAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKSHPSG*IKLSQL
Trigger: GAGCTGGCTCAGTTTGATCCAGCCAGAAGGATGAGA...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATATCTCATCCTTCTGGCTaGATCAAACTGAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGISHPSG*IKLSQL
Trigger: GAGCTGGCTCAGTTTGATCCAGCCAGAAGGATGAGA...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTTGCCTCTCATCCTTCTaGCTGGATCAAACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSCLSSF*LDQTEP
Trigger: TGGCTCAGTTTGATCCAGCCAGAAGGATGAGAGGCA...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATTGCCTCTCATCCTTCTaGCTGGATCAAACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNCLSSF*LDQTEP
Trigger: TGGCTCAGTTTGATCCAGCCAGAAGGATGAGAGGCA...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCTGCCTCTCATCCTTCTaGCTGGATCAAACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGCLSSF*LDQTEP
Trigger: TGGCTCAGTTTGATCCAGCCAGAAGGATGAGAGGCA...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGTGGTTGGAAAGTCATTaGTTTTCTTGGCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWWLESH*FSWRAP
Trigger: AGGAGCCCGCCAAGAAAACCAATGACTTTCCAACCA...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATAGGTCCTGGGCCTGCTaGTTCTTAGATTTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNRSWAC*FLDLCL
Trigger: AAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGACTCAAACTAGTTAGATaGGCACAGAGGTTTGAAATC +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGLKLVR*AQRFEI
Trigger: GATTTCAAACCTCTGTGCCCATCTAACTAGTTTGAG...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp TCATTATCCAGAGAAATGTTGACAACATCAGACCACAAGGGACATCCTGGTTGGCTCAAACTAGTTAGATaGGCACAGAGGTTTGAAATC +
Preference number: 4 (lower is better)
Translates to: SLSREMLTTSDHKGHPGWLKLVR*AQRFEI
Trigger: GATTTCAAACCTCTGTGCCCATCTAACTAGTTTGAG...CCAACCAGGATGTCCCTTGTGGTCTGATGTTGTCAACATTTCTCTGGATAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529387.5
CDS-3UTR CCA 90 bp AATCCAGATGAATCTGTCGTTTCATTCAGAAACTTCTCTGCAAGAAGGATTCTCGGCATAGGCAATTTCTaGAGTTTAGCAGTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: NPDESVVSFRNFSARRILGIGNF*SLAVQS
Trigger: GCTCTGGACTGCTAAACTCCAGAAATTGCCTATGCC...GAGAATCCTTCTTGCAGAGAAGTTTCTGAATGAAACGACAGATTCATCTGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTATGTGTGCCACTAGATaGCGTGTCAGACCAACTCAC +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSMCATR*RVRPTH
Trigger: GTGAGTTGGTCTGACACGCCATCTAGTGGCACACAT...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTAAGTCGAGCCCTGTTTTaGAGCTACTACTCGAACAGT +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLSRALF*SYYSNS
Trigger: ACTGTTCGAGTAGTAGCTTCAAAACAGGGCTCGACT...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAAGTCGAGCCCTGTTTTaGAGCTACTACTCGAACAGT +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGISRALF*SYYSNS
Trigger: ACTGTTCGAGTAGTAGCTTCAAAACAGGGCTCGACT...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCAGTCGAGCCCTGTTTTaGAGCTACTACTCGAACAGT +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGSRALF*SYYSNS
Trigger: ACTGTTCGAGTAGTAGCTTCAAAACAGGGCTCGACT...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTCGAGCCCTGTTTTaGAGCTACTACTCGAACAGT +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSSRALF*SYYSNS
Trigger: ACTGTTCGAGTAGTAGCTTCAAAACAGGGCTCGACT...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTACATCATGAACAATCGTaGTCTCTCTGCCCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLHHEQS*SLCPCR
Trigger: TCTACAGGGGCAGAGAGATCACGATTGTTCATGATG...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTCCCGTAGTCCATGTCTaGTTTCTCATTATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSPVVHV*FLIIQR
Trigger: TCTCTGGATAATGAGAAATCAGACATGGACTACGGG...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAATGGGCACAGAGGTTTaGAATCAGCCTCCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIMGTEV*NQPPLK
Trigger: CTTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCAT...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAAGGTATATTTTGACTTaGAGCTATCTTCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGRYILT*SYLPLS
Trigger: TGACAAGGGAAGATAGCTTCAAGTCAAAATATACCT...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTGTTCAACTGTTCTCCTaGTTTCTCTGGGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCVQLFS*FLWDWP
Trigger: TGGCCAGTCCCAGAGAAATCAGGAGAACAGTTGAAC...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp AATCCAGATGAATCTGTCGTTTCATTCAGAAACTTCTCTGCAAGAAGGATTCTCGAGTACCCAGAGGTATaGCTTAGTGCAATGATTTCC +
Preference number: 4 (lower is better)
Translates to: NPDESVVSFRNFSARRILEYPEV*LSAMIS
Trigger: GGAAATCATTGCACTAAGTCATACCTCTGGGTACTC...GAGAATCCTTCTTGCAGAGAAGTTTCTGAATGAAACGACAGATTCATCTGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTCCAGATGTCTGGCTGTaGAGAGAAACTGGAATCTGG +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCPDVWL*RETGIW
Trigger: CCAGATTCCAGTTTCTCTTCACAGCCAGACATCTGG...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGGCTTCGCCACATCCATaGCATATGAACAAGCATCAA +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWASPHP*HMNKHQ
Trigger: TTGATGCTTGTTCATATGTCATGGATGTGGCGAAGC...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATATCATGCCATTTTTGGTaGGTCATCTTAGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGISCHFW*VILGHL
Trigger: CAGGTGGCCTAAGATGACTCACCAAAAATGGCATGA...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGCACCTAAATCCCACTTaGTCCCAAGCAAAAACCTCA +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWHLNPT*SQAKTS
Trigger: TGAGGTTTTTGCTTGGGATCAAGTGGGATTTAGGTG...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTCTCGAACAGTCCTCCTaGTGTCCAAACAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSLEQSS*CPNNPS
Trigger: ACTTGGATTGTTTGGACAGCAGGAGGACTGTTCGAG...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAACTCGAACAGTCCTCCTaGTGTCCAAACAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKLEQSS*CPNNPS
Trigger: ACTTGGATTGTTTGGACAGCAGGAGGACTGTTCGAG...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATACTTTGCTGCTTTCCCTaGTTCATACAAGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGILCCFP*FIQGLR
Trigger: CCTCAAGCCTTGTATGAAGCAGGGAAAGCAGCAAAG...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR GCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAACTTTGCTGCTTTCCCTaGTTCATACAAGGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKLCCFP*FIQGLR
Trigger: CCTCAAGCCTTGTATGAAGCAGGGAAAGCAGCAAAG...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR GCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTGGTGTTGTTATATCTaGCTCTCATCCTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNWCCYI*LSSFWL
Trigger: CAGCCAGAAGGATGAGAGGCAGATATAACAACACCA...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCAAGACTGGCGGAAATTaGTGTCCTCCTCATGTAGGG +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFKTGGN*CPPHVG
Trigger: CCCTACATGAGGAGGACAGCAATTTCCGCCAGTCTT...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTACCAATAGTCAGGATTaGTCTCCAAGTCCCCAGACA +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSTNSQD*SPSPQT
Trigger: TGTCTGGGGACTTGGAGAGCAATCCTGACTATTGGT...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCACCAATAGTCAGGATTaGTCTCCAAGTCCCCAGACA +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGTNSQD*SPSPQT
Trigger: TGTCTGGGGACTTGGAGAGCAATCCTGACTATTGGT...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAAGAAGGTCCTGGGCCTaGTGGTTCTTAGATTTGTGT +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKRRSWA*WFLDLC
Trigger: ACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCT...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp GAACTGGGATGGCAGAAACAATTAACGGCAAGTGAAGCACAAAACCGGAAAAGATATAACCATTTCCTGTaGAGGACACACTATTCAAAG +
Preference number: 4 (lower is better)
Translates to: ELGWQKQLTASEAQNRKRYNHFL*RTHYSK
Trigger: CTTTGAATAGTGTGTCCTGCACAGGAAATGGTTATA...TCTTTTCCGGTTTTGTGCTTCACTTGCCGTTAATTGTTTCTGCCATCCCAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGACCAAAGTGGGAGTaGTATTGGCCAGTCATCCTT +
Preference number: 4 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNRPKWE*YWPVIL
Trigger: AAGGATGACTGGCCAATAGCACTCCCACTTTGGTCT...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCGGTCATAAACAGACTTaGCACATCTCTGGCCACATG +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGGHKQT*HISGHM
Trigger: CATGTGGCCAGAGATGTGGCAAGTCTGTTTATGACC...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTAAAAGTGGGAAATGGCTaGAACAGAAGGATCGCTGTC +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLKVGNG*NRRIAV
Trigger: GACAGCGATCCTTCTGTTCCAGCCATTTCCCACTTT...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAAAAGTGGGAAATGGCTaGAACAGAAGGATCGCTGTC +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIKVGNG*NRRIAV
Trigger: GACAGCGATCCTTCTGTTCCAGCCATTTCCCACTTT...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAAAAGTGGGAAATGGCTaGAACAGAAGGATCGCTGTC +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKKVGNG*NRRIAV
Trigger: GACAGCGATCCTTCTGTTCCAGCCATTTCCCACTTT...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTGAGGAAAGTGGGAAATaGCTGGAACAGAAGGATCGC +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCEESGK*LEQKDR
Trigger: GCGATCCTTCTGTTCCAGCCATTTCCCACTTTCCTC...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCGAGGAAAGTGGGAAATaGCTGGAACAGAAGGATCGC +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFEESGK*LEQKDR
Trigger: GCGATCCTTCTGTTCCAGCCATTTCCCACTTTCCTC...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTATCTCCACAGCAAAACTaGGCAAGAGATCAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLSPQQN*ARDQQA
Trigger: TGCTTGCTGATCTCTTGCCCAGTTTTGCTGTGGAGA...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000526687.1
ENST00000528703.5
CDS-3UTR CCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCAGGTCCTGGGCCTGCTaGTTCTTAGATTTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGRSWAC*FLDLCL
Trigger: AAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTAGGCATAGGCAATTTCTaGAGTTTAGCAGTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLGIGNF*SLAVQS
Trigger: GCTCTGGACTGCTAAACTCCAGAAATTGCCTATGCC...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATGGCATAGGCAATTTCTaGAGTTTAGCAGTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNGIGNF*SLAVQS
Trigger: GCTCTGGACTGCTAAACTCCAGAAATTGCCTATGCC...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTGGCATAGGCAATTTCTaGAGTTTAGCAGTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSGIGNF*SLAVQS
Trigger: GCTCTGGACTGCTAAACTCCAGAAATTGCCTATGCC...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATATGTCTCCCTAACTGTTaGGATTTCAGGTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGICLPNC*DFRCEP
Trigger: TGGCTCACACCTGAAATCCCAACAGTTAGGGAGACA...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp AGGAGAAGAAACAAAAGGACACATAGAGGAAAGTCAGGGGTGCTGAGGACAAGAATTTTTACCTTTTTGTaGAGGATGGGATCTCACTAT +
Preference number: 4 (lower is better)
Translates to: RRRNKRTHRGKSGVLRTRIFTFL*RMGSHY
Trigger: ATAGTGAGATCCCATCCTCCACAAAAAGGTAAAAAT...TCTTGTCCTCAGCACCCCTGACTTTCCTCTATGTGTCCTTTTGTTTCTTCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAAGAGGCTGGGAGGGTaGGGTTGTATATTAATGTCC +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSKRLGG*GCILMS
Trigger: GGACATTAATATACAACCCCACCCTCCCAGCCTCTT...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCCATCATGAACAATCGTaGTCTCTCTGCCCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFHHEQS*SLCPCR
Trigger: TCTACAGGGGCAGAGAGATCACGATTGTTCATGATG...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTTGCTTGCTTCTCATCTaGTGGAAAGACTGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCCLLLI*WKDWRK
Trigger: TTTCCGCCAGTCTTTCCATCAGATGAGAAGCAAGCA...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR TCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTATCCAGAGAAATGTTaGCAACATCAGACCACAAGG +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNYPEKC*QHQTTR
Trigger: CCTTGTGGTCTGATGTTGTCAACATTTCTCTGGATA...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTTATCCAGAGAAATGTTaGCAACATCAGACCACAAGG +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSYPEKC*QHQTTR
Trigger: CCTTGTGGTCTGATGTTGTCAACATTTCTCTGGATA...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATACCCGTAGTCCATGTCTaGTTTCTCATTATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIPVVHV*FLIIQR
Trigger: TCTCTGGATAATGAGAAATCAGACATGGACTACGGG...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAACCCGTAGTCCATGTCTaGTTTCTCATTATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKPVVHV*FLIIQR
Trigger: TCTCTGGATAATGAGAAATCAGACATGGACTACGGG...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATCCCGTAGTCCATGTCTaGTTTCTCATTATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNPVVHV*FLIIQR
Trigger: TCTCTGGATAATGAGAAATCAGACATGGACTACGGG...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGCCTTCCCAGAAGAAATaGGTCAGACTAGTTACTTCA +
Preference number: 4 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWPSQKK*VRLVTS
Trigger: TGAAGTAACTAGTCTGACTCATTTCTTCTGGGAAGG...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTACAAGTAGGTGTGGATaGTGGACAGGGAATCTTAAA +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSTSRCG*WTGNLK
Trigger: TTTAAGATTCCCTGTCCATCATCCACACCTACTTGT...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATGGTGTTGTTATATCTaGCTCTCATCCTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKWCCYI*LSSFWL
Trigger: CAGCCAGAAGGATGAGAGGCAGATATAACAACACCA...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTATGGTGTTGTTATATCTaGCTCTCATCCTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLWCCYI*LSSFWL
Trigger: CAGCCAGAAGGATGAGAGGCAGATATAACAACACCA...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTATTATTTTTGGTCTCTaGAGCTGGTGCTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSIIFGL*SWCYEA
Trigger: AGCCTCATAGCACCAGCTGCAGAGACCAAAAATAAT...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATATTTCTAGCAGGCATATaGTTGTGCCCCTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIFLAGI*LCPSWK
Trigger: TTTCCAAGAGGGGCACAAGCATATGCCTGCTAGAAA...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp GAACTGGGATGGCAGAAACAATTAACGGCAAGTGAAGCACAAAACCGGAAAAGAAAAATTGAGCCCAGATaGTTCAAGCAAAAACAGATT +
Preference number: 4 (lower is better)
Translates to: ELGWQKQLTASEAQNRKRKIEPR*FKQKQI
Trigger: AATCTGTTTTTGCTTGAAGCATCTGGGCTCAATTTT...TCTTTTCCGGTTTTGTGCTTCACTTGCCGTTAATTGTTTCTGCCATCCCAGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAAGTCATTGGTTTTCTTaGCGGGCTCCTTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKSHWFS*RAPFSS
Trigger: AGAGGAAAAAGGAGCCCGCCAAGAAAACCAATGACT...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTTGGTTGGAAAGTCATTaGTTTTCTTGGCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCWLESH*FSWRAP
Trigger: AGGAGCCCGCCAAGAAAACCAATGACTTTCCAACCA...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTGGCATAGGCAATTTCTaGAGTTTAGCAGTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCGIGNF*SLAVQS
Trigger: GCTCTGGACTGCTAAACTCCAGAAATTGCCTATGCC...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTGGTGACAAGGGTAACTaGGCCCTTTTCTTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSGDKGN*ALFFCH
Trigger: ATGACAAAAGAAAAGGGCCCAGTTACCCTTGTCACC...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp GAACTGGGATGGCAGAAACAATTAACGGCAAGTGAAGCACAAAACCGGAAAAGACTTCCATTAAGATGCTaGCAGCATTTAAATCTGATT +
Preference number: 4 (lower is better)
Translates to: ELGWQKQLTASEAQNRKRLPLRC*QHLNLI
Trigger: AATCAGATTTAAATGCTGCCAGCATCTTAATGGAAG...TCTTTTCCGGTTTTGTGCTTCACTTGCCGTTAATTGTTTCTGCCATCCCAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGAGTCACTCTCTTaGATGTGTGCCACTAGATGG +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGIESLS*MCATRW
Trigger: CCATCTAGTGGCACACATCCAAGAGAGTGACTCTAT...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp AATCCAGATGAATCTGTCGTTTCATTCAGAAACTTCTCTGCAAGAAGGATTCTCCTAGCTTTGCTCTACTaGACATTAACGTCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: NPDESVVSFRNFSARRILLALLY*TLTSQR
Trigger: TCTCTGAGACGTTAATGTCCAGTAGAGCAAAGCTAG...GAGAATCCTTCTTGCAGAGAAGTTTCTGAATGAAACGACAGATTCATCTGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp ATTGATGTAAAAACACAAGTAGGTGTGGATGATGGACAGGGAATCTTAAATCTTCCTGAAGCCTTGGGTTaGAATAATACGTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: IDVKTQVGVDDGQGILNLPEALG*NNTCEG
Trigger: TCCCTCACACGTATTATTCCAACCCAAGGCTTCAGG...AAGATTTAAGATTCCCTGTCCATCATCCACACCTACTTGTGTTTTTACATCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CAA 72 bp TTGTCAACAATAGTGGAGGCTATGAGAAACACAAGTTaGGATGGATTAAGAGGTTCAGGGATGAACATTCAG +
Preference number: 4 (lower is better)
Translates to: LSTIVEAMRNTS*DGLRGSGMNIQ
Trigger: CTGAATGTTCATCCCTGAACCTCTTAATCCATCCAAACTTGTGTTTCTCATAGCCTCCACTATTGTTGACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CAA 72 bp TTAAAGCCTCTTGCCCTCCCCATCTTAAGATTTTGTTaGCAGTCTACAGGTTGCATTAGAAAGAAATGCACA +
Preference number: 4 (lower is better)
Translates to: LKPLALPILRFC*QSTGCIRKKCT
Trigger: TGTGCATTTCTTTCTAATGCAACCTGTAGACTGCAAACAAAATCTTAAGATGGGGAGGGCAAGAGGCTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCTATCCAGAGAAATGTTaGCAACATCAGACCACAAGG +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGYPEKC*QHQTTR
Trigger: CCTTGTGGTCTGATGTTGTCAACATTTCTCTGGATA...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTACAATTAACGGCAAGTaGAGCACAAAACCGGAAAAG +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSTINGK*STKPEK
Trigger: CTTTTCCGGTTTTGTGCTTCACTTGCCGTTAATTGT...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCATCATCTTTTCCATCTaGACTGGGGTCCAAACAGAC +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFIIFSI*TGVQTD
Trigger: GTCTGTTTGGACCCCAGTTCAGATGGAAAAGATGAT...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp AAGTTTGGATGGATTAAGAGGTTCAGGGATGAACATTCAGACAAGAACGAGTCAGATGTTGGGATCAAATaGAAGTGTTCTGTAAACAGT +
Preference number: 4 (lower is better)
Translates to: KFGWIKRFRDEHSDKNESDVGIK*KCSVNS
Trigger: ACTGTTTACAGAACACTTTCATTTGATCCCAACATC...TGACTCGTTCTTGTCTGAATGTTCATCCCTGAACCTCTTAATCCATCCAAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp ATTGATGTAAAAACACAAGTAGGTGTGGATGATGGACAGGGAATCTTAAATCTTTGGTGCTTAGTTGGATaGAGCAGCAACAGTATCTGT +
Preference number: 4 (lower is better)
Translates to: IDVKTQVGVDDGQGILNLWCLVG*SSNSIC
Trigger: ACAGATACTGTTGCTGCTTCATCCAACTAAGCACCA...AAGATTTAAGATTCCCTGTCCATCATCCACACCTACTTGTGTTTTTACATCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCGCAGAATCAGAGTCCTaGCCTGACTTCAGAAAACAA +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFAESES*PDFRKQ
Trigger: TTGTTTTCTGAAGTCAGGTCAGGACTCTGATTCTGC...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCGGTAGGATTTGTCACTaGACTGTGGTAAAAACAGCC +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFGRICH*TVVKTA
Trigger: GGCTGTTTTTACCACAGTTCAGTGACAAATCCTACC...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTTGGTGTTGTTATATCTaGCTCTCATCCTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCWCCYI*LSSFWL
Trigger: CAGCCAGAAGGATGAGAGGCAGATATAACAACACCA...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTACACAGGGAACTGCTTaGTTCTCATCTGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCTQGTA*FSSDGK
Trigger: CTTTCCATCAGATGAGAAGCAAGCAGTTCCCTGTGT...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR GCA 90 bp ATAAATTCATATGTAGCTTTTCCCTTAAGTAATGTGAGGCACACCTCCATCCAATCTCAACACTGCCCTTaGACCACTCTGATGTTAAAT +
Preference number: 4 (lower is better)
Translates to: INSYVAFPLSNVRHTSIQSQHCP*TTLMLN
Trigger: ATTTAACATCAGAGTGGTGCAAGGGCAGTGTTGAGA...TTGGATGGAGGTGTGCCTCACATTACTTAAGGGAAAAGCTACATATGAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATGAGTAAAGCCTTTTaGCTGCTTGGTCAAATGAGC +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGMSKAF*LLGQMS
Trigger: GCTCATTTGACCAAGCAGGCAAAAGGCTTTACTCAT...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTAGTCATTGGTTTTCTTaGCGGGCTCCTTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCSHWFS*RAPFSS
Trigger: AGAGGAAAAAGGAGCCCGCCAAGAAAACCAATGACT...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATAAGGGACATCCTGGTTaGAAAGTCATTGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNKGHPG*KVIGFL
Trigger: AAGAAAACCAATGACTTTCCAACCAGGATGTCCCTT...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTTGGCACAATGTAATATaGCATTGCACCACACATGAG +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSWHNVI*HCTTHE
Trigger: CTCATGTGTGGTGCAATGCCATATTACATTGTGCCA...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTTATCCAGAGAAATGTTaGCAACATCAGACCACAAGG +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCYPEKC*QHQTTR
Trigger: CCTTGTGGTCTGATGTTGTCAACATTTCTCTGGATA...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTGATAAACGCTATAGTTaGGAAACTCTGTATGTAGGA +
Preference number: 4 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSDKRYS*ETLYVG
Trigger: TCCTACATACAGAGTTTCTCAACTATAGCGTTTATC...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp ATAAATTCATATGTAGCTTTTCCCTTAAGTAATGTGAGGCACACCTCCATCCAAAGTGAAGTTTGTGGGTaGAATGGTCCACATTCAAAA +
Preference number: 4 (lower is better)
Translates to: INSYVAFPLSNVRHTSIQSEVCG*NGPHSK
Trigger: TTTTGAATGTGGACCATTTCACCCACAAACTTCACT...TTGGATGGAGGTGTGCCTCACATTACTTAAGGGAAAAGCTACATATGAATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATTCTTGTTGTCTGTTCTaGGACTGTCACAATAGATCA +
Preference number: 4 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNSCCLF*DCHNRS
Trigger: TGATCTATTGTGACAGTCTCAGAACAGACAACAAGA...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp ATAAATTCATATGTAGCTTTTCCCTTAAGTAATGTGAGGCACACCTCCATCCAACAGATTCCAGTCCCATaGGTATTTAAGGAATTGGAA +
Preference number: 4 (lower is better)
Translates to: INSYVAFPLSNVRHTSIQQIPVP*VFKELE
Trigger: TTCCAATTCCTTAAATACTCATGGGACTGGAATCTG...TTGGATGGAGGTGTGCCTCACATTACTTAAGGGAAAAGCTACATATGAATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATATTCTCCAGAAAACCTaGAGCATATATTACCCCTCA +
Preference number: 4 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNILQKT*SIYYPS
Trigger: TGAGGGGTAATATATGCTTCAGGTTTTCTGGAGAAT...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp AATCCAGATGAATCTGTCGTTTCATTCAGAAACTTCTCTGCAAGAAGGATTCTCCAAACATTTCAGTTTTaGTGTCACAAGGCACAAAGA +
Preference number: 4 (lower is better)
Translates to: NPDESVVSFRNFSARRILQTFQF*CHKAQR
Trigger: TCTTTGTGCCTTGTGACATCAAAACTGAAATGTTTG...GAGAATCCTTCTTGCAGAGAAGTTTCTGAATGAAACGACAGATTCATCTGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCGCCTTCCTTGCCTCTTaGATGAAATCTACATCCATA +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFAFLAS*MKSTSI
Trigger: TATGGATGTAGATTTCATTCAAGAGGCAAGGAAGGC...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAGTTCTCACACATTCTTaGTTTCTTGGTAAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKVLTHS*FLGKLL
Trigger: GAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAAC...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTAGTTCTCACACATTCTTaGTTTCTTGGTAAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLVLTHS*FLGKLL
Trigger: GAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAAC...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGTTCTCACACATTCTTaGTTTCTTGGTAAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIVLTHS*FLGKLL
Trigger: GAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAAC...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTGTTCTCACACATTCTTaGTTTCTTGGTAAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSVLTHS*FLGKLL
Trigger: GAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAAC...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp AATCCAGATGAATCTGTCGTTTCATTCAGAAACTTCTCTGCAAGAAGGATTCTCGAAAGAAATGCACAATaGGTGTATGTGTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: NPDESVVSFRNFSARRILERNAQ*VYVCLF
Trigger: AAAAAGGCACACATACACGCATTGTGCATTTCTTTC...GAGAATCCTTCTTGCAGAGAAGTTTCTGAATGAAACGACAGATTCATCTGGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTGGAATTTTCTCCTCTaGTTGGTTTTTAGAGACAGT +
Preference number: 4 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNWNFLL*LVFRDS
Trigger: ACTGTCTCTAAAAACCAAGCAGAGGAGAAAATTCCA...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAAAGGGACATCCTGGTTaGAAAGTCATTGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKKGHPG*KVIGFL
Trigger: AAGAAAACCAATGACTTTCCAACCAGGATGTCCCTT...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATATGGATACTAGAGGAATaGTACTTTGAGAATAGGGTC +
Preference number: 4 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIWILEE*YFENRV
Trigger: GACCCTATTCTCAAAGTACCATTCCTCTAGTATCCA...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp AAGTTTGGATGGATTAAGAGGTTCAGGGATGAACATTCAGACAAGAACGAGTCAGACAGTCAGAAGGCCTaGCTTTATAATTTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: KFGWIKRFRDEHSDKNESDSQKA*LYNFKN
Trigger: GTTTTTAAAATTATAAAGCCAGGCCTTCTGACTGTC...TGACTCGTTCTTGTCTGAATGTTCATCCCTGAACCTCTTAATCCATCCAAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTAGAGAAACTGGAATCTaGAATACCCAGATTCCAGTC +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCRETGI*NTQIPV
Trigger: GACTGGAATCTGGGTATTCCAGATTCCAGTTTCTCT...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCACCTCCATCCAATACTaGAAGGTTAGCAATAGAGTC +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFTSIQY*KVSNRV
Trigger: GACTCTATTGCTAACCTTCCAGTATTGGATGGAGGT...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
3UTR CAA 72 bp CTATCTACACAAACGATAAAATCCAGAGATCTAGCTTaGGGATTTAGGCAAAATCTATCATTTAGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: LSTQTIKSRDLA*GFRQNLSFRQG
Trigger: CCCTTGCCTAAATGATAGATTTTGCCTAAATCCCAAAGCTAGATCTCTGGATTTTATCGTTTGTGTAGATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp ATAAATTCATATGTAGCTTTTCCCTTAAGTAATGTGAGGCACACCTCCATCCAAGATAAACGCTATAGTTaGGAAACTCTGTATGTAGGA +
Preference number: 4 (lower is better)
Translates to: INSYVAFPLSNVRHTSIQDKRYS*ETLYVG
Trigger: TCCTACATACAGAGTTTCTCAACTATAGCGTTTATC...TTGGATGGAGGTGTGCCTCACATTACTTAAGGGAAAAGCTACATATGAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAGATAAACGCTATAGTTaGGAAACTCTGTATGTAGGA +
Preference number: 4 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKDKRYS*ETLYVG
Trigger: TCCTACATACAGAGTTTCTCAACTATAGCGTTTATC...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCAGGTATATTTTGACTTaGAGCTATCTTCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGRYILT*SYLPLS
Trigger: TGACAAGGGAAGATAGCTTCAAGTCAAAATATACCT...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGGTATATTTTGACTTaGAGCTATCTTCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSRYILT*SYLPLS
Trigger: TGACAAGGGAAGATAGCTTCAAGTCAAAATATACCT...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR TCA 90 bp ATAAATTCATATGTAGCTTTTCCCTTAAGTAATGTGAGGCACACCTCCATCCAACACAAGAGTGCAGGGTaGAAAGCTTTGATAAAAATT +
Preference number: 4 (lower is better)
Translates to: INSYVAFPLSNVRHTSIQHKSAG*KALIKI
Trigger: AATTTTTATCAAAGCTTTTCACCCTGCACTCTTGTG...TTGGATGGAGGTGTGCCTCACATTACTTAAGGGAAAAGCTACATATGAATTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCGAAAGCCTGGAAGTCTaGATGATTTATCCAGTTCTA +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFESLEV*MIYPVL
Trigger: TAGAACTGGATAAATCATTCAGACTTCCAGGCTTTC...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp ATTGATGTAAAAACACAAGTAGGTGTGGATGATGGACAGGGAATCTTAAATCTTTTAGCATTTGAGGAATaGATGGTGCTTAGTTGGATG +
Preference number: 4 (lower is better)
Translates to: IDVKTQVGVDDGQGILNLLAFEE*MVLSWM
Trigger: CATCCAACTAAGCACCATTCATTCCTCAAATGCTAA...AAGATTTAAGATTCCCTGTCCATCATCCACACCTACTTGTGTTTTTACATCAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCAGACTTCCATTAAGATaGTGGCAGCATTTAAATCTG +
Preference number: 4 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGRLPLR*WQHLNL
Trigger: CAGATTTAAATGCTGCCAGCATCTTAATGGAAGTCT...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCAAGGGACATCCTGGTTaGAAAGTCATTGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFKGHPG*KVIGFL
Trigger: AAGAAAACCAATGACTTTCCAACCAGGATGTCCCTT...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCGTGGTTAGGCAATTTTaGGAAACACTAATCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFVVRQF*ETLISR
Trigger: TCTGCTGATTAGTGTTTCCCAAAATTGCCTAACCAC...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR TCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCAGGTATATTTTGACTTaGAGCTATCTTCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFRYILT*SYLPLS
Trigger: TGACAAGGGAAGATAGCTTCAAGTCAAAATATACCT...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR GCA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTTTGCAGTCTACAGGTTaGATTAGAAAGAAATGCACA +
Preference number: 4 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCLQSTG*IRKKCT
Trigger: TGTGCATTTCTTTCTAATGCAACCTGTAGACTGCAA...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR GCA 90 bp ATAAATTCATATGTAGCTTTTCCCTTAAGTAATGTGAGGCACACCTCCATCCAAAATCCACTGTGGCTATaGTTCTACACAAAATTTGTA +
Preference number: 4 (lower is better)
Translates to: INSYVAFPLSNVRHTSIQNPLWL*FYTKFV
Trigger: TACAAATTTTGTGTAGAAGCATAGCCACAGTGGATT...TTGGATGGAGGTGTGCCTCACATTACTTAAGGGAAAAGCTACATATGAATTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CCA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCAAAAGATCCAGAGGTTaGGAGTCTAAAGACCTAATA +
Preference number: 4 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFKRSRG*ESKDLI
Trigger: TATTAGGTCTTTAGACTCCCAACCTCTGGATCTTTT...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS TCA 90 bp GCCGCGGCAGGTGCGCGTCCTCGGCGGGTCTGCGGCGCGCGGGGCTaGAGGCCCAGCCGCGGTCAGCATCGGTCAGGGGCTCGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: AAAGARPRRVCGARG*RPSRGQHRSGARGC
Trigger: GCAGCCGCGAGCCCCTGACCGATGCTGACCGCGGCTGGGCCTTCAGCCCCGCGCGCCGCAGACCCGCCGAGGACGCGCACCTGCCGCGGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 90 bp GCGCTCGAAGCGGCTCCCGCCCCGCGCCTCGTGACTGTTGCCGTCTaGCCGGCGGGGCCGCTGGCCGTAGGAGTCAGCGAAGGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: ALEAAPAPRLVTVAV*PAGPLAVGVSEGRQ
Trigger: CTGGCGGCCTTCGCTGACTCCTACGGCCAGCGGCCCCGCCGGGCAGACGGCAACAGTCACGAGGCGCGGGGCGGGAGCCGCTTCGAGCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 90 bp CACCGCGGCTGGCGCCCTCGGGCCGCGCCTGGCGCTCCCGCGCGCTaGCCAGGTACGAGTGGTCGTATTTGGGTGCGGTGCCTGGCGTGC +
Preference number: 5 (lower is better)
Translates to: HRGWRPRAAPGAPAR*PGTSGRIWVRCLAC
Trigger: GCACGCCAGGCACCGCACCCAAATACGACCACTCGTACCTGGGCAGCGCGCGGGAGCGCCAGGCGCGGCCCGAGGGCGCCAGCCGCGGTG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CCA 90 bp CCCTCGGGCCGCGCCTGGCGCTCCCGCGCGCTGCCCAGGTACGAGTaGTCGTATTTGGGTGCGGTGCCTGGCGTGCGGCTCACCAGCCGC +
Preference number: 5 (lower is better)
Translates to: PSGRAWRSRALPRYE*SYLGAVPGVRLTSR
Trigger: GCGGCTGGTGAGCCGCACGCCAGGCACCGCACCCAAATACGACCACTCGTACCTGGGCAGCGCGCGGGAGCGCCAGGCGCGGCCCGAGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CCA 90 bp AAGCGTAGTAGGAGGCGCTGCGCGGGCCGAGCTGCGCGCTCCGCTTaGATGGCGTCTCCAGGCTGCCACCGCGGCTGGCGCCCTCGGGCC +
Preference number: 5 (lower is better)
Translates to: KRSRRRCAGRAARSA*MASPGCHRGWRPRA
Trigger: GGCCCGAGGGCGCCAGCCGCGGTGGCAGCCTGGAGACGCCATCCAAGCGGAGCGCGCAGCTCGGCCCGCGCAGCGCCTCCTACTACGCTT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 90 bp ACTCCGAGCGCTCGAAGCGGCTCCCGCCCCGCGCCTCGTGACTGTTaGCGTCTGCCCGGCGGGGCCGCTGGCCGTAGGAGTCAGCGAAGG +
Preference number: 5 (lower is better)
Translates to: TPSARSGSRPAPRDC*RLPGGAAGRRSQRR
Trigger: CCTTCGCTGACTCCTACGGCCAGCGGCCCCGCCGGGCAGACGGCAACAGTCACGAGGCGCGGGGCGGGAGCCGCTTCGAGCGCTCGGAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CCA 90 bp CCGCGCGCTGCCCAGGTACGAGTGGTCGTATTTGGGTGCGGTGCCTaGCGTGCGGCTCACCAGCCGCGGCAGGTGCGCGTCCTCGGCGGG +
Preference number: 5 (lower is better)
Translates to: PRAAQVRVVVFGCGA*RAAHQPRQVRVLGG
Trigger: CCCGCCGAGGACGCGCACCTGCCGCGGCTGGTGAGCCGCACGCCAGGCACCGCACCCAAATACGACCACTCGTACCTGGGCAGCGCGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CCA 90 bp GCGCCTGGCGCTCCCGCGCGCTGCCCAGGTACGAGTGGTCGTATTTaGGTGCGGTGCCTGGCGTGCGGCTCACCAGCCGCGGCAGGTGCG +
Preference number: 5 (lower is better)
Translates to: APGAPARCPGTSGRI*VRCLACGSPAAAGA
Trigger: CGCACCTGCCGCGGCTGGTGAGCCGCACGCCAGGCACCGCACCCAAATACGACCACTCGTACCTGGGCAGCGCGCGGGAGCGCCAGGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 90 bp GCTCCCGCGCGCTGCCCAGGTACGAGTGGTCGTATTTGGGTGCGGTaGCTGGCGTGCGGCTCACCAGCCGCGGCAGGTGCGCGTCCTCGG +
Preference number: 5 (lower is better)
Translates to: APARCPGTSGRIWVR*LACGSPAAAGARPR
Trigger: CCGAGGACGCGCACCTGCCGCGGCTGGTGAGCCGCACGCCAGGCACCGCACCCAAATACGACCACTCGTACCTGGGCAGCGCGCGGGAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 90 bp CTGGCGCTCCCGCGCGCTGCCCAGGTACGAGTGGTCGTATTTGGGTaGGGTGCCTGGCGTGCGGCTCACCAGCCGCGGCAGGTGCGCGTC +
Preference number: 5 (lower is better)
Translates to: LALPRAAQVRVVVFG*GAWRAAHQPRQVRV
Trigger: GACGCGCACCTGCCGCGGCTGGTGAGCCGCACGCCAGGCACCGCACCCAAATACGACCACTCGTACCTGGGCAGCGCGCGGGAGCGCCAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 90 bp CGGCCTTGTAGGTGCCGGGCGGCGACCAAGCGTAGTAGGAGGCGCTaGGCGGGCCGAGCTGCGCGCTCCGCTTGGATGGCGTCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: RPCRCRAATKRSRRR*AGRAARSAWMASPG
Trigger: GCCTGGAGACGCCATCCAAGCGGAGCGCGCAGCTCGGCCCGCGCAGCGCCTCCTACTACGCTTGGTCGCCGCCCGGCACCTACAAGGCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 90 bp CGGACGCGTCCTCCTGGTCGTCCTGCGACGAGCCGGCCTTGTAGGTaGCGGGCGGCGACCAAGCGTAGTAGGAGGCGCTGCGCGGGCCGA +
Preference number: 5 (lower is better)
Translates to: RTRPPGRPATSRPCR*RAATKRSRRRCAGR
Trigger: TCGGCCCGCGCAGCGCCTCCTACTACGCTTGGTCGCCGCCCGGCACCTACAAGGCCGGCTCGTCGCAGGACGACCAGGAGGACGCGTCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 90 bp CGCTGCCCAGGTACGAGTGGTCGTATTTGGGTGCGGTGCCTGGCGTaGGGCTCACCAGCCGCGGCAGGTGCGCGTCCTCGGCGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: RCPGTSGRIWVRCLA*GSPAAAGARPRRVC
Trigger: GCAGACCCGCCGAGGACGCGCACCTGCCGCGGCTGGTGAGCCGCACGCCAGGCACCGCACCCAAATACGACCACTCGTACCTGGGCAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CCA 90 bp GGGGCCGCTGGCCGTAGGAGTCAGCGAAGGCCGCCAGCTCGTCCATaGAAACGGCCGGCACCCCCGTGGCGAAGTTCTTCCGCGACAGCA +
Preference number: 5 (lower is better)
Translates to: GAAGRRSQRRPPARP*KRPAPPWRSSSATA
Trigger: TGCTGTCGCGGAAGAACTTCGCCACGGGGGTGCCGGCCGTTTCCATGGACGAGCTGGCGGCCTTCGCTGACTCCTACGGCCAGCGGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 90 bp AGGCCCAGCCGCGGTCAGCATCGGTCAGGGGCTCGCGGCTGCGGCTaGGCTGACCGTAGTACTCCTCCAAGGAGTCGTCCTGGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: RPSRGQHRSGARGCG*ADRSTPPRSRPGRS
Trigger: GCTTCTACCAGGACGACTCCTTGGAGGAGTACTACGGTCAGCGCAGCCGCAGCCGCGAGCCCCTGACCGATGCTGACCGCGGCTGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CCA 90 bp CAGCGAAGGCCGCCAGCTCGTCCATGGAAACGGCCGGCACCCCCGTaGCGAAGTTCTTCCGCGACAGCATCTCCGACTTGGAGCGCGGCT +
Preference number: 5 (lower is better)
Translates to: QRRPPARPWKRPAPP*RSSSATASPTWSAA
Trigger: AGCCGCGCTCCAAGTCGGAGATGCTGTCGCGGAAGAACTTCGCCACGGGGGTGCCGGCCGTTTCCATGGACGAGCTGGCGGCCTTCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 90 bp CATTGGTTTTCTTGGCGGGCTCCTTTTTCCTCTTCTTCTCCGAGTTaGTGTGGTAGGGCAGGTCGCGGCCGCGGTAGGACGGGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: HWFSWRAPFSSSSPS*CGRAGRGRGRTGRG
Trigger: CCCGCGGCCCGTCCTACCGCGGCCGCGACCTGCCCTACCACAGCAACTCGGAGAAGAAGAGGAAAAAGGAGCCCGCCAAGAAAACCAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CCA 90 bp CCAACTTCCCAGCCGAATTACGGAGTGAGGAAAGTGGGAAATGGCTaGAACAGAAGGATCGCTGTCACCCCGCGGCAGCGGGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: PTSQPNYGVRKVGNG*NRRIAVTPRQRAAA
Trigger: CGCCGCCGCCCGCTGCCGCGGGGTGACAGCGATCCTTCTGTTCCAGCCATTTCCCACTTTCCTCACTCCGTAATTCGGCTGGGAAGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTACTGAGGGCCCGCGGCTaGCCCCACTGCTGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVLRARG*PHCCLP
Trigger: TGGGAGGCAGCAGTGGGGCAAGCCGCGGGCCCTCAG...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 90 bp AGGGCCGGGGACACCGGAGACAGAGGGAGGGTACCCGGCCTTTGCTaGTTTCCCTGCTTCATACAAGGCTTGAGGGCAGCAGCAGGAATC +
Preference number: 5 (lower is better)
Translates to: RAGDTGDRGRVPGLC*FPCFIQGLRAAAGI
Trigger: GATTCCTGCTGCTGCCCTCAAGCCTTGTATGAAGCAGGGAAAGCAGCAAAGGCCGGGTACCCTCCCTCTGTCTCCGGTGTCCCCGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS GCA 90 bp GTAAGGGCCGGGGACACCGGAGACAGAGGGAGGGTACCCGGCCTTTaGTGCTTTCCCTGCTTCATACAAGGCTTGAGGGCAGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: VRAGDTGDRGRVPGL*CFPCFIQGLRAAAG
Trigger: TCCTGCTGCTGCCCTCAAGCCTTGTATGAAGCAGGGAAAGCAGCAAAGGCCGGGTACCCTCCCTCTGTCTCCGGTGTCCCCGGCCCTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS TCA 90 bp ACTCCATGGCTGAGGGCCCGCGGCTTGCCCCACTGCTGCCTCCCATaGCACCTGACCAATAGTCAGGATTGCTCTCCAAGTCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: TPWLRARGLPHCCLP*HLTNSQDCSPSPQT
Trigger: TGTCTGGGGACTTGGAGAGCAATCCTGACTATTGGTCAGGTGTCATGGGAGGCAGCAGTGGGGCAAGCCGCGGGCCCTCAGCCATGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CCA 90 bp TTCCCCAACTTCCCAGCCGAATTACGGAGTGAGGAAAGTGGGAAATaGCTGGAACAGAAGGATCGCTGTCACCCCGCGGCAGCGGGCGGC +
Preference number: 5 (lower is better)
Translates to: FPNFPAELRSEESGK*LEQKDRCHPAAAGG
Trigger: GCCGCCCGCTGCCGCGGGGTGACAGCGATCCTTCTGTTCCAGCCATTTCCCACTTTCCTCACTCCGTAATTCGGCTGGGAAGTTGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCCTGAGGGCCCGCGGCTaGCCCCACTGCTGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: LKSASLKGCLPSLAKAEILRARG*PHCCLP
Trigger: TGGGAGGCAGCAGTGGGGCAAGCCGCGGGCCCTCAG...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 90 bp GACACCGGAGACAGAGGGAGGGTACCCGGCCTTTGCTGCTTTCCCTaGTTCATACAAGGCTTGAGGGCAGCAGCAGGAATCTGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: DTGDRGRVPGLCCFP*FIQGLRAAAGIWAA
Trigger: TGCTGCCCAGATTCCTGCTGCTGCCCTCAAGCCTTGTATGAAGCAGGGAAAGCAGCAAAGGCCGGGTACCCTCCCTCTGTCTCCGGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS GCA 90 bp CTGTGGCTTCCTCCAGTGGAGTCACTTGGTGCCAAGGGAGGTGGATaGGGCTTGTCCATCAGCATGCCAGATGAGGGGGCTCCTCCCAAA +
Preference number: 5 (lower is better)
Translates to: LWLPPVESLGAKGGG*GLSISMPDEGAPPK
Trigger: TTTGGGAGGAGCCCCCTCATCTGGCATGCTGATGGACAAGCCGCATCCACCTCCCTTGGCACCAAGTGACTCCACTGGAGGAAGCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CAA 90 bp CAGAAGAATCCAGGGAGGAGACGAAAGGTCCTAATGAAGGCAGTGACACAGAGACTGAGGGCCCGCGGCTaGCCCCACTGCTGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: QKNPGRRRKVLMKAVTQRLRARG*PHCCLP
Trigger: TGGGAGGCAGCAGTGGGGCAAGCCGCGGGCCCTCAG...TCTCTGTGTCACTGCCTTCATTAGGACCTTTCGTCTCCTCCCTGGATTCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS CCA 90 bp CCGGTAACCTTTGCGAACACTGTGGCTTCCTCCAGTGGAGTCACTTaGTGCCAAGGGAGGTGGATGCGGCTTGTCCATCAGCATGCCAGA +
Preference number: 5 (lower is better)
Translates to: PVTFANTVASSSGVT*CQGRWMRLVHQHAR
Trigger: TCTGGCATGCTGATGGACAAGCCGCATCCACCTCCCTTGGCACCAAGTGACTCCACTGGAGGAAGCCACAGTGTTCGCAAAGGTTACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS TCA 90 bp GGACTTGAACTTCCACTGCACAACTGCAGGCTGATGGGAGGATGTTaGGAAGTGGCAGCGAAGCACAGTGGGCTGGAAGAGCATGGCCAC +
Preference number: 5 (lower is better)
Translates to: GLELPLHNCRLMGGC*EVAAKHSGLEEHGH
Trigger: GTGGCCATGCTCTTCCAGCCCACTGTGCTTCGCTGCCACTTCTCAACATCCTCCCATCAGCCTGCAGTTGTGCAGTGGAAGTTCAAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTACTCCAGTGGAGTCACTaGGTGCCAAGGGAGGTGGAT +
Preference number: 5 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVLQWSH*VPREVD
Trigger: ATCCACCTCCCTTGGCACCAAGTGACTCCACTGGAG...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271417.8
ENST00000529071.5
CDS-3UTR CAA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGGACAGCATCTCCGACTaGGAGCGCGGCTGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: LSFRIANGVLVLLREEAGDSISD*ERGWLC
Trigger: GCACAGCCAGCCGCGCTCCAAGTCGGAGATGCTGTC...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATTACGAGTGGTCGTATTaGGGTGCGGTGCCTGGCGTG +
Preference number: 5 (lower is better)
Translates to: QPPLKAACHPLPKQRSANYEWSY*GAVPGV
Trigger: CACGCCAGGCACCGCACCCAAATACGACCACTCGTA...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp CTGGTTTGCAGACAGATACCTTGCTGTATCCTCACATGGCAGAGAAAGAGAGGAAGCTGCGCGCTCCGCTaGGATGGCGTCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LVCRQIPCCILTWQRKRGSCALR*DGVSRL
Trigger: CAGCCTGGAGACGCCATCCAAGCGGAGCGCGCAGCT...TCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGAGCTGCGCGCTCCGCTaGGATGGCGTCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWSCALR*DGVSRL
Trigger: CAGCCTGGAGACGCCATCCAAGCGGAGCGCGCAGCT...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS TCA 90 bp CAGTGGGCTGGAAGAGCATGGCCACCTTCTTCTTGTCGGGCACTGTaGCCTGAAGGCCTTCGACCATGGCTGTTAGCCAGAAGAGAGAAA +
Preference number: 5 (lower is better)
Translates to: QWAGRAWPPSSCRAL*PEGLRPWLLARREK
Trigger: TTTCTCTCTTCTGGCTAACAGCCATGGTCGAAGGCCTTCAGGTCACAGTGCCCGACAAGAAGAAGGTGGCCATGCTCTTCCAGCCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATGAGGGTACCCGGCCTTaGCTGCTTTCCCTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: QPPLKAACHPLPKQRSANEGTRP*LLSLLH
Trigger: ATGAAGCAGGGAAAGCAGCAAAGGCCGGGTACCCTC...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CAA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCGGAGGTGGATGCGGCTaGTCCATCAGCATGCCAGAT +
Preference number: 5 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVGGGCG*SISMPD
Trigger: ATCTGGCATGCTGATGGACAAGCCGCATCCACCTCC...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271417.8
ENST00000529071.5
CDS-3UTR CAA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCTACGAGTGGTCGTATTaGGGTGCGGTGCCTGGCGTG +
Preference number: 5 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIYEWSY*GAVPGV
Trigger: CACGCCAGGCACCGCACCCAAATACGACCACTCGTA...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp ATAGGGTCTAGCCCCAGTAGGGTGGCTCTGGAGAAGACCAAAAGGATGGTAAAGAGCCGGAAAGGCTGGTaGTTCAGGGCTCTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: IGSSPSRVALEKTKRMVKSRKGW*FRALWL
Trigger: CAGCCACAGAGCCCTGAACAACCAGCCTTTCCGGCT...CTTTACCATCCTTTTGGTCTTCTCCAGAGCCACCCTACTGGGGCTAGACCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCTCTCTTGCTGAGAGATaGGGCCCGGGTAGAGGACAT +
Preference number: 5 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVSLAER*GPGRGH
Trigger: ATGTCCTCTACCCGGGCCCAATCTCTCAGCAAGAGA...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp AGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATGTCCATTCCAGGTTTCTCTaGCTGAGAGATTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: RSWACWFLDLCLVPVVHVHSRFL*LRDWAR
Trigger: CCGGGCCCAATCTCTCAGCAAGAGAAACCTGGAATG...GACATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTATGCTTCATACAAGGCTaGAGGGCAGCAGCAGGAATC +
Preference number: 5 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVCFIQG*RAAAGI
Trigger: GATTCCTGCTGCTGCCCTCAAGCCTTGTATGAAGCA...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271417.8
ENST00000529071.5
CDS-3UTR CAA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCGACAGCATCTCCGACTaGGAGCGCGGCTGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGDSISD*ERGWLC
Trigger: GCACAGCCAGCCGCGCTCCAAGTCGGAGATGCTGTC...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTACTGGTTGGAAAGTCATaGGTTTTCTTGGCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVLVGKS*VFLAGS
Trigger: GGAGCCCGCCAAGAAAACCAATGACTTTCCAACCAG...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp CAAGCACAGCAGCTTATGCATCATCCCCCTGGGACCCCTGCTGCTCACCCTTTCTGCTGGTTCTTAGATTaGTGTCTTGTCCCCGTAGTC +
Preference number: 5 (lower is better)
Translates to: QAQQLMHHPPGTPAAHPFCWFLD*CLVPVV
Trigger: GACTACGGGGACAAGACACAAATCTAAGAACCAGCA...GAAAGGGTGAGCAGCAGGGGTCCCAGGGGGATGATGCATAAGCTGCTGTGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp ATAGGGTCTAGCCCCAGTAGGGTGGCTCTGGAGAAGACCAAAAGGATGGTAAAGTGTGTCTTCCAGCCCTaGGAAGTGCCAGCACTGGGT +
Preference number: 5 (lower is better)
Translates to: IGSSPSRVALEKTKRMVKCVFQP*EVPALG
Trigger: ACCCAGTGCTGGCACTTCCAAGGGCTGGAAGACACA...CTTTACCATCCTTTTGGTCTTCTCCAGAGCCACCCTACTGGGGCTAGACCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp CAAGCACAGCAGCTTATGCATCATCCCCCTGGGACCCCTGCTGCTCACCCTTTCGCACCTAAATCCCACTaGATCCCAAGCAAAAACCTC +
Preference number: 5 (lower is better)
Translates to: QAQQLMHHPPGTPAAHPFAPKSH*IPSKNL
Trigger: GAGGTTTTTGCTTGGGATCAAGTGGGATTTAGGTGC...GAAAGGGTGAGCAGCAGGGGTCCCAGGGGGATGATGCATAAGCTGCTGTGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS TCA 90 bp AGGACATGCCCAAGGATTCTCCCATGCGATCCTGGCAGTAGGACTTaGACTTCCACTGCACAACTGCAGGCTGATGGGAGGATGTTGAGA +
Preference number: 5 (lower is better)
Translates to: RTCPRILPCDPGSRT*TSTAQLQADGRMLR
Trigger: TCTCAACATCCTCCCATCAGCCTGCAGTTGTGCAGTGGAAGTTCAAGTCCTACTGCCAGGATCGCATGGGAGAATCCTTGGGCATGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCTCTCTTGCTGAGAGATaGGGCCCGGGTAGAGGACAT +
Preference number: 5 (lower is better)
Translates to: LKSASLKGCLPSLAKAEISLAER*GPGRGH
Trigger: ATGTCCTCTACCCGGGCCCAATCTCTCAGCAAGAGA...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp CAGAAGAATCCAGGGAGGAGACGAAAGGTCCTAATGAAGGCAGTGACACAGAGAGGAGGTGGATGCGGCTaGTCCATCAGCATGCCAGAT +
Preference number: 5 (lower is better)
Translates to: QKNPGRRRKVLMKAVTQRGGGCG*SISMPD
Trigger: ATCTGGCATGCTGATGGACAAGCCGCATCCACCTCC...TCTCTGTGTCACTGCCTTCATTAGGACCTTTCGTCTCCTCCCTGGATTCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGCTCCAGTGGAGTCACTaGGTGCCAAGGGAGGTGGAT +
Preference number: 5 (lower is better)
Translates to: LSFRIANGVLVLLREEAGLQWSH*VPREVD
Trigger: ATCCACCTCCCTTGGCACCAAGTGACTCCACTGGAG...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CAA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATCTGAGGGCCCGCGGCTaGCCCCACTGCTGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNLRARG*PHCCLP
Trigger: TGGGAGGCAGCAGTGGGGCAAGCCGCGGGCCCTCAG...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATCTGGTTGGAAAGTCATaGGTTTTCTTGGCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: QPPLKAACHPLPKQRSANLVGKS*VFLAGS
Trigger: GGAGCCCGCCAAGAAAACCAATGACTTTCCAACCAG...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCTGGTTGGAAAGTCATaGGTTTTCTTGGCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVLVGKS*VFLAGS
Trigger: GGAGCCCGCCAAGAAAACCAATGACTTTCCAACCAG...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGCATTCCAGGTTTCTCTaGCTGAGAGATTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: LSFRIANGVLVLLREEAGHSRFL*LRDWAR
Trigger: CCGGGCCCAATCTCTCAGCAAGAGAAACCTGGAATG...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATCAGTCGAGCCCTGTTTaGAAGCTACTACTCGAACAG +
Preference number: 5 (lower is better)
Translates to: QPPLKAACHPLPKQRSANQSSPV*KLLLEQ
Trigger: CTGTTCGAGTAGTAGCTTCAAAACAGGGCTCGACTG...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp AGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATGTCCAGTCGAGCCCTGTTTaGAAGCTACTACTCGAACAG +
Preference number: 5 (lower is better)
Translates to: RSWACWFLDLCLVPVVHVQSSPV*KLLLEQ
Trigger: CTGTTCGAGTAGTAGCTTCAAAACAGGGCTCGACTG...GACATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCAGTCGAGCCCTGTTTaGAAGCTACTACTCGAACAG +
Preference number: 5 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVQSSPV*KLLLEQ
Trigger: CTGTTCGAGTAGTAGCTTCAAAACAGGGCTCGACTG...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCAAAGACTGGCGGAAATaGCTGTCCTCCTCATGTAGG +
Preference number: 5 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVKDWRK*LSSSCR
Trigger: CCTACATGAGGAGGACAGCAATTTCCGCCAGTCTTT...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCCTGAGGGCCCGCGGCTaGCCCCACTGCTGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGLRARG*PHCCLP
Trigger: TGGGAGGCAGCAGTGGGGCAAGCCGCGGGCCCTCAG...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTACTGAGGGCCCGCGGCTaGCCCCACTGCTGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLLRARG*PHCCLP
Trigger: TGGGAGGCAGCAGTGGGGCAAGCCGCGGGCCCTCAG...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTATGCTGGTTCTTAGATTaGTGTCTTGTCCCCGTAGTC +
Preference number: 5 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVCWFLD*CLVPVV
Trigger: GACTACGGGGACAAGACACAAATCTAAGAACCAGCA...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp ACTATTCAGAAATATTTACAGATGTGGTCAGGTGCCTTGGGTTTGGGTGGCAGCGAGGCCTGCCCTGTGTaGGTGAATATGGGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TIQKYLQMWSGALGLGGSEACPV*VNMGSS
Trigger: GCTGCTGCCCATATTCACCAACACAGGGCAGGCCTC...GCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp CCATCCAATACTGGAAGGTTAGCAATAGAGTCACTCTCTTGGATGTGTGCCACTGCCAGCCCCAAAGGATaGAGAGGGACCTCACCAGGA +
Preference number: 5 (lower is better)
Translates to: PSNTGRLAIESLSWMCATASPKG*RGTSPG
Trigger: TCCTGGTGAGGTCCCTCTCAATCCTTTGGGGCTGGC...AGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCATACGTGTGAGGGAATaGGCAACAAAAGGAAGCCGG +
Preference number: 5 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVIRVRE*ATKGSR
Trigger: CCGGCTTCCTTTTGTTGCCAATTCCCTCACACGTAT...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGCATTCCAGGTTTCTCTaGCTGAGAGATTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWHSRFL*LRDWAR
Trigger: CCGGGCCCAATCTCTCAGCAAGAGAAACCTGGAATG...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGTGCTTCATACAAGGCTaGAGGGCAGCAGCAGGAATC +
Preference number: 5 (lower is better)
Translates to: LSFRIANGVLVLLREEAGCFIQG*RAAAGI
Trigger: GATTCCTGCTGCTGCCCTCAAGCCTTGTATGAAGCA...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CAA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATCTCTCTCGATCCTCTTaGTTATACTCCATGGCTGAG +
Preference number: 5 (lower is better)
Translates to: QPPLKAACHPLPKQRSANLSRSS*LYSMAE
Trigger: CTCAGCCATGGAGTATAACAAAGAGGATCGAGAGAG...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp GAACTGGGATGGCAGAAACAATTAACGGCAAGTGAAGCACAAAACCGGAAAAGATACGAGTGGTCGTATTaGGGTGCGGTGCCTGGCGTG +
Preference number: 5 (lower is better)
Translates to: ELGWQKQLTASEAQNRKRYEWSY*GAVPGV
Trigger: CACGCCAGGCACCGCACCCAAATACGACCACTCGTA...TCTTTTCCGGTTTTGTGCTTCACTTGCCGTTAATTGTTTCTGCCATCCCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTAGCTGCGCGCTCCGCTaGGATGGCGTCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSSCALR*DGVSRL
Trigger: CAGCCTGGAGACGCCATCCAAGCGGAGCGCGCAGCT...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATAGCTGCGCGCTCCGCTaGGATGGCGTCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNSCALR*DGVSRL
Trigger: CAGCCTGGAGACGCCATCCAAGCGGAGCGCGCAGCT...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCGATGGGCACAGAGGTTaGAAATCAGCCTCCCTTAAA +
Preference number: 5 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVDGHRG*KSASLK
Trigger: TTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCATC...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp AGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATGTCGATGGGCACAGAGGTTaGAAATCAGCCTCCCTTAAA +
Preference number: 5 (lower is better)
Translates to: RSWACWFLDLCLVPVVHVDGHRG*KSASLK
Trigger: TTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCATC...GACATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp CAAGCACAGCAGCTTATGCATCATCCCCCTGGGACCCCTGCTGCTCACCCTTTCACAAACAAACAAAATTaGCTGGACGTGGTGGCATAT +
Preference number: 5 (lower is better)
Translates to: QAQQLMHHPPGTPAAHPFTNKQN*LDVVAY
Trigger: ATATGCCACCACGTCCAGCAAATTTTGTTTGTTTGT...GAAAGGGTGAGCAGCAGGGGTCCCAGGGGGATGATGCATAAGCTGCTGTGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp CAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAGCAAATCACCTCATGCCATTTTaGGTGAGTCATCTTAGGCCA +
Preference number: 5 (lower is better)
Translates to: QPPLKAACHPLPKQRSANHLMPF*VSHLRP
Trigger: TGGCCTAAGATGACTCACCAAAAATGGCATGAGGTG...ATTTGCTGATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGAAGGGAGAAGCACCTaGCCCAGCATTAAGTATTTT +
Preference number: 5 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVEGRST*PSIKYF
Trigger: AAAATACTTAATGCTGGGCAAGGTGCTTCTCCCTTC...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCCAAGGGACATCCTGGTaGGAAAGTCATTCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIQGTSW*ESHSVP
Trigger: AGGCACAGAATGACTTTCCAACCAGGATGTCCCTTG...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469934.6
CDS-3UTR CAA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCCAAGGGACATCCTGGTaGGAAAGTCATTCCAACACC +
Preference number: 5 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIQGTSW*ESHSNT
Trigger: GGTGTTGGAATGACTTTCCAACCAGGATGTCCCTTG...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529387.5
CDS GCA 90 bp AATAGTCAGGATTGCTCTCCAAGTCCCCAGACACAGGGAACTGCTTaGTTCTCATCTGATGGAAAGACTGGCGGAAATTGCTGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: NSQDCSPSPQTQGTA*FSSDGKTGGNCCPP
Trigger: AGGAGGACAGCAATTTCCGCCAGTCTTTCCATCAGATGAGAAGCAAGCAGTTCCCTGTGTCTGGGGACTTGGAGAGCAATCCTGACTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGAGGGTACCCGGCCTTaGCTGCTTTCCCTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGEGTRP*LLSLLH
Trigger: ATGAAGCAGGGAAAGCAGCAAAGGCCGGGTACCCTC...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CAA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAAGTTCTGAGATGGTGTaGTTATATCTGCCTCTCATC +
Preference number: 5 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVSSEMV*LYLPLI
Trigger: GATGAGAGGCAGATATAACAACACCATCTCAGAACT...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGGACAGCATCTCCGACTaGGAGCGCGGCTGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWDSISD*ERGWLC
Trigger: GCACAGCCAGCCGCGCTCCAAGTCGGAGATGCTGTC...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCTGCTGGTTCTTAGATTaGTGTCTTGTCCCCGTAGTC +
Preference number: 5 (lower is better)
Translates to: LKSASLKGCLPSLAKAEICWFLD*CLVPVV
Trigger: GACTACGGGGACAAGACACAAATCTAAGAACCAGCA...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS TCA 90 bp GATGGAAAGACTGGCGGAAATTGCTGTCCTCCTCATGTAGGGAGCTaGGTTCTGAGATGGTGTTGTTATATCTGCCTCTCATCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: DGKTGGNCCPPHVGS*VLRWCCYICLSSFW
Trigger: CCAGAAGGATGAGAGGCAGATATAACAACACCATCTCAGAACTCAGCTCCCTACATGAGGAGGACAGCAATTTCCGCCAGTCTTTCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp AGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATGTCAGTTCTGAGATGGTGTaGTTATATCTGCCTCTCATC +
Preference number: 5 (lower is better)
Translates to: RSWACWFLDLCLVPVVHVSSEMV*LYLPLI
Trigger: GATGAGAGGCAGATATAACAACACCATCTCAGAACT...GACATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTGACAGCATCTCCGACTaGGAGCGCGGCTGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSDSISD*ERGWLC
Trigger: GCACAGCCAGCCGCGCTCCAAGTCGGAGATGCTGTC...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATGACAGCATCTCCGACTaGGAGCGCGGCTGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNDSISD*ERGWLC
Trigger: GCACAGCCAGCCGCGCTCCAAGTCGGAGATGCTGTC...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTAGCTGCGCGCTCCGCTaGGATGGCGTCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCSCALR*DGVSRL
Trigger: CAGCCTGGAGACGCCATCCAAGCGGAGCGCGCAGCT...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCCTGGTTGGAAAGTCATaGGTTTTCTTGGCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGLVGKS*VFLAGS
Trigger: GGAGCCCGCCAAGAAAACCAATGACTTTCCAACCAG...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp GGCCAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTATTATCCAGAGAAATGTaGACAACATCAGACCACAAG +
Preference number: 5 (lower is better)
Translates to: GQRRSWACWFLDLCLVPVLSREM*TTSDHK
Trigger: CTTGTGGTCTGATGTTGTCAACATTTCTCTGGATAA...TACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCAACTCTCTTTCAGAATaGCAAATGGAGTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVNSLSE*QMESWF
Trigger: GAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTT...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGCACCCTCCTACTCCCTaGTTCTTTATTCTCACACAG +
Preference number: 5 (lower is better)
Translates to: LSFRIANGVLVLLREEAGHPPTP*FFILTQ
Trigger: CTGTGTGAGAATAAAGAACAAGGGAGTAGGAGGGTG...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp CTGGTTTGCAGACAGATACCTTGCTGTATCCTCACATGGCAGAGAAAGAGAGGAAAGTCATTGGTTTTCTaGGCGGGCTCCTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: LVCRQIPCCILTWQRKRGKSLVF*AGSFFL
Trigger: GAGGAAAAAGGAGCCCGCCAAGAAAACCAATGACTT...TCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAACTCTCTTTCAGAATaGCAAATGGAGTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: LKSASLKGCLPSLAKAEINSLSE*QMESWF
Trigger: GAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTT...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp CTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGGGCTGGGAGGGTGGGGTaGTATATTAATGTCCATTAT +
Preference number: 5 (lower is better)
Translates to: LSFRIANGVLVLLREEAGAGRVG*YINVHY
Trigger: ATAATGGACATTAATATACAACCCCACCCTCCCAGC...CCCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp TTTATTTCTCACAGTTCTAGAATCTGGGAAGTCCAAGCTCAGTGCACCAATACACATTCCAGGTTTCTCTaGCTGAGAGATTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: FISHSSRIWEVQAQCTNTHSRFL*LRDWAR
Trigger: CCGGGCCCAATCTCTCAGCAAGAGAAACCTGGAATG...TGTATTGGTGCACTGAGCTTGGACTTCCCAGATTCTAGAACTGTGAGAAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTGGAGGTGGATGCGGCTaGTCCATCAGCATGCCAGAT +
Preference number: 5 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSGGGCG*SISMPD
Trigger: ATCTGGCATGCTGATGGACAAGCCGCATCCACCTCC...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CAA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTCTCCAGTGGAGTCACTaGGTGCCAAGGGAGGTGGAT +
Preference number: 5 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSLQWSH*VPREVD
Trigger: ATCCACCTCCCTTGGCACCAAGTGACTCCACTGGAG...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CAA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAAAAGACTGGCGGAAATaGCTGTCCTCCTCATGTAGG +
Preference number: 5 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGKDWRK*LSSSCR
Trigger: CCTACATGAGGAGGACAGCAATTTCCGCCAGTCTTT...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTTACGAGTGGTCGTATTaGGGTGCGGTGCCTGGCGTG +
Preference number: 5 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSYEWSY*GAVPGV
Trigger: CACGCCAGGCACCGCACCCAAATACGACCACTCGTA...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCGATGGGCACAGAGGTTaGAAATCAGCCTCCCTTAAA +
Preference number: 5 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGDGHRG*KSASLK
Trigger: TTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCATC...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp CAGAGAAGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCAAGGTATATTTTGACTaGAAGCTATCTTCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: QRRSWACWFLDLCLVPVVKVYFD*KLSSLV
Trigger: GACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT...GACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp AGGTCCTGGGCCTGCTGGTTCTTAGATTTGTGTCTTGTCCCCGTAGTCCATGTCAAGGTATATTTTGACTaGAAGCTATCTTCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: RSWACWFLDLCLVPVVHVKVYFD*KLSSLV
Trigger: GACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT...GACATGGACTACGGGGACAAGACACAAATCTAAGAACCAGCAGGCCCAGGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp CCATCCAATACTGGAAGGTTAGCAATAGAGTCACTCTCTTGGATGTGTGCCACTCAACACGGAAGTCCTTaGGTAGGTCAATTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: PSNTGRLAIESLSWMCATQHGSP*VGQFSK
Trigger: CTTGGAGAATTGACCTACCAAAGGACTTCCGTGTTG...AGTGGCACACATCCAAGAGAGTGACTCTATTGCTAACCTTCCAGTATTGGATGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp CTGGTTTGCAGACAGATACCTTGCTGTATCCTCACATGGCAGAGAAAGAGAGGAGAAGATGCCAGATTTTaGCTGTTAAGCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LVCRQIPCCILTWQRKRGEDARF*LLSSFC
Trigger: GCAGAAGCTGCTTAACAGCAAAAATCTGGCATCTTC...TCCTCTCTTTCTCTGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp GAACTGGGATGGCAGAAACAATTAACGGCAAGTGAAGCACAAAACCGGAAAAGAGGTCCTTTTCCTGGTTaGCAGACAGATACCTTGCTG +
Preference number: 5 (lower is better)
Translates to: ELGWQKQLTASEAQNRKRGPFPG*QTDTLL
Trigger: CAGCAAGGTATCTGTCTGCAAACCAGGAAAAGGACC...TCTTTTCCGGTTTTGTGCTTCACTTGCCGTTAATTGTTTCTGCCATCCCAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTTCTCTTGCTGAGAGATaGGGCCCGGGTAGAGGACAT +
Preference number: 5 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSSLAER*GPGRGH
Trigger: ATGTCCTCTACCCGGGCCCAATCTCTCAGCAAGAGA...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCAAGGTATATTTTGACTaGAAGCTATCTTCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIKVYFD*KLSSLV
Trigger: GACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp TTGAAATCAGCCTCCCTTAAAGGCTGCCTGCCATCCCTTGCCAAAGCAGAGATCCAATATTCTCCAAAATaGCCTGAGCAAGTTGAAATC +
Preference number: 5 (lower is better)
Translates to: LKSASLKGCLPSLAKAEIQYSPK*PEQVEI
Trigger: GATTTCAACTTGCTCAGGCAATTTTGGAGAATATTG...GATCTCTGCTTTGGCAAGGGATGGCAGGCAGCCTTTAAGGGAGGCTGATTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp ACTATTCAGAAATATTTACAGATGTGGTCAGGTGCCTTGGGTTTGGGTGGCAGCAAAACGAAACTCTCCTaGAGTGAAGCTACAACTCCC +
Preference number: 5 (lower is better)
Translates to: TIQKYLQMWSGALGLGGSKTKLS*SEATTP
Trigger: GGGAGTTGTAGCTTCACTCAAGGAGAGTTTCGTTTT...GCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS TCA 90 bp TGTCCCCGTAGTCCATGTCTGATTTCTCATTATCCAGAGAAATGTTaGCAACATCAGACCACAAGGGACATCCTGGTTGGAAAGTCATTG +
Preference number: 5 (lower is better)
Translates to: CPRSPCLISHYPEKC*QHQTTRDILVGKSL
Trigger: CAATGACTTTCCAACCAGGATGTCCCTTGTGGTCTGATGTTGTCAACATTTCTCTGGATAATGAGAAATCAGACATGGACTACGGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS TCA 90 bp TGTCCCCGTAGTCCATGTCTGATTTCTCATTATCCAGAGAAATGTTaGCAACATCAGACCACAAGGGACATCCTGGTTGGAAAGTCATTC +
Preference number: 5 (lower is better)
Translates to: CPRSPCLISHYPEKC*QHQTTRDILVGKSF
Trigger: GAATGACTTTCCAACCAGGATGTCCCTTGTGGTCTGATGTTGTCAACATTTCTCTGGATAATGAGAAATCAGACATGGACTACGGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469934.6
ENST00000529387.5
CDS-3UTR CAA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTACATTCCAGGTTTCTCTaGCTGAGAGATTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLHSRFL*LRDWAR
Trigger: CCGGGCCCAATCTCTCAGCAAGAGAAACCTGGAATG...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCCATTCCAGGTTTCTCTaGCTGAGAGATTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGHSRFL*LRDWAR
Trigger: CCGGGCCCAATCTCTCAGCAAGAGAAACCTGGAATG...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATACATTCCAGGTTTCTCTaGCTGAGAGATTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIHSRFL*LRDWAR
Trigger: CCGGGCCCAATCTCTCAGCAAGAGAAACCTGGAATG...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTGAGGGTACCCGGCCTTaGCTGCTTTCCCTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCEGTRP*LLSLLH
Trigger: ATGAAGCAGGGAAAGCAGCAAAGGCCGGGTACCCTC...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CAA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATACACCAGGGTTATGGCTaGTGTCTTCCAGCCCTTGGA +
Preference number: 5 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIHQGYG*CLPALG
Trigger: TCCAAGGGCTGGAAGACACAAGCCATAACCCTGGTG...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGAGCCTGCTATCTTCTTaGTACTTTTCAGTCTATCTG +
Preference number: 5 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWSLLSS*YFSVYL
Trigger: CAGATAGACTGAAAAGTACAAAGAAGATAGCAGGCT...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCTCAGGTGCCTTGGGTTaGGGTGGCAGCCTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGSGALG*GGSLFS
Trigger: TGAGAAAAGGCTGCCACCCAAACCCAAGGCACCTGA...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAATCTCAACACTGCCCTaGCACCACTCTGATGTTAAA +
Preference number: 5 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGISTLP*HHSDVK
Trigger: TTTAACATCAGAGTGGTGCAAGGGCAGTGTTGAGAT...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp CTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCCCCCATCTTAAGATTTaGTTTGCAGTCTACAGGTTG +
Preference number: 5 (lower is better)
Translates to: LTLFQNCKWSPGSVKGGGPHLKI*FAVYRL
Trigger: CAACCTGTAGACTGCAAACAAAATCTTAAGATGGGG...GCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp ACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAGGAGGCTGGAATTTTCTCCTCTGCTaGGTTTTTAGAGACAGTGAG +
Preference number: 5 (lower is better)
Translates to: TLFQNCKWSPGSVKGGGWNFLLC*VFRDSE
Trigger: CTCACTGTCTCTAAAAACCAAGCAGAGGAGAAAATT...CCAGCCTCCTCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCACCTTTGCGAAAGGCTaGAGGGCAGCAGCAGGAATC +
Preference number: 5 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGTFAKG*RAAAGI
Trigger: GATTCCTGCTGCTGCCCTCAAGCCTTTCGCAAAGGT...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528703.5
CDS-3UTR CAA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTTCTCTTGCTGAGAGATaGGGCCCGGGTAGAGGACAT +
Preference number: 5 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCSLAER*GPGRGH
Trigger: ATGTCCTCTACCCGGGCCCAATCTCTCAGCAAGAGA...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTCTCTTGCTGAGAGATaGGGCCCGGGTAGAGGACAT +
Preference number: 5 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFSLAER*GPGRGH
Trigger: ATGTCCTCTACCCGGGCCCAATCTCTCAGCAAGAGA...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATTGCTTCATACAAGGCTaGAGGGCAGCAGCAGGAATC +
Preference number: 5 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNCFIQG*RAAAGI
Trigger: GATTCCTGCTGCTGCCCTCAAGCCTTGTATGAAGCA...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS-3UTR CAA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAAGTTCTGAGATGGTGTaGTTATATCTGCCTCTCATC +
Preference number: 5 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGSSEMV*LYLPLI
Trigger: GATGAGAGGCAGATATAACAACACCATCTCAGAACT...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAAAGACTGGCGGAAATaGCTGTCCTCCTCATGTAGG +
Preference number: 5 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWKDWRK*LSSSCR
Trigger: CCTACATGAGGAGGACAGCAATTTCCGCCAGTCTTT...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp ACTATTCAGAAATATTTACAGATGTGGTCAGGTGCCTTGGGTTTGGGTGGCAGCTTATCCAGAGAAATGTaGACAACATCAGACCACAAG +
Preference number: 5 (lower is better)
Translates to: TIQKYLQMWSGALGLGGSLSREM*TTSDHK
Trigger: CTTGTGGTCTGATGTTGTCAACATTTCTCTGGATAA...GCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp ACTATTCAGAAATATTTACAGATGTGGTCAGGTGCCTTGGGTTTGGGTGGCAGCAGTTCGTGGCCATTTTaGCTATCTACACAAACGATA +
Preference number: 5 (lower is better)
Translates to: TIQKYLQMWSGALGLGGSSSWPF*LSTQTI
Trigger: TATCGTTTGTGTAGATAGCAAAAATGGCCACGAACT...GCTGCCACCCAAACCCAAGGCACCTGACCACATCTGTAAATATTTCTGAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp TTTATTTCTCACAGTTCTAGAATCTGGGAAGTCCAAGCTCAGTGCACCAATACAGTAAAAGCATACCTTTaGCTCTGTCAGTACCAGCCC +
Preference number: 5 (lower is better)
Translates to: FISHSSRIWEVQAQCTNTVKAYL*LCQYQP
Trigger: GGGCTGGTACTGACAGAGCAAAAGGTATGCTTTTAC...TGTATTGGTGCACTGAGCTTGGACTTCCCAGATTCTAGAACTGTGAGAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTCAGTCGAGCCCTGTTTaGAAGCTACTACTCGAACAG +
Preference number: 5 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSQSSPV*KLLLEQ
Trigger: CTGTTCGAGTAGTAGCTTCAAAACAGGGCTCGACTG...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATCAGTCGAGCCCTGTTTaGAAGCTACTACTCGAACAG +
Preference number: 5 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNQSSPV*KLLLEQ
Trigger: CTGTTCGAGTAGTAGCTTCAAAACAGGGCTCGACTG...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAACAGTCGAGCCCTGTTTaGAAGCTACTACTCGAACAG +
Preference number: 5 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKQSSPV*KLLLEQ
Trigger: CTGTTCGAGTAGTAGCTTCAAAACAGGGCTCGACTG...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAAAGACTGGCGGAAATaGCTGTCCTCCTCATGTAGG +
Preference number: 5 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNKDWRK*LSSSCR
Trigger: CCTACATGAGGAGGACAGCAATTTCCGCCAGTCTTT...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCAAAGACTGGCGGAAATaGCTGTCCTCCTCATGTAGG +
Preference number: 5 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGKDWRK*LSSSCR
Trigger: CCTACATGAGGAGGACAGCAATTTCCGCCAGTCTTT...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAAAGACTGGCGGAAATaGCTGTCCTCCTCATGTAGG +
Preference number: 5 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSKDWRK*LSSSCR
Trigger: CCTACATGAGGAGGACAGCAATTTCCGCCAGTCTTT...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATCTCTCTCGATCCTCTTaGTTATACTCCATGGCTGAG +
Preference number: 5 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNLSRSS*LYSMAE
Trigger: CTCAGCCATGGAGTATAACAAAGAGGATCGAGAGAG...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAAGTCATTGGTTTTCTaGGCGGGCTCCTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWKSLVF*AGSFFL
Trigger: GAGGAAAAAGGAGCCCGCCAAGAAAACCAATGACTT...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATAAGTCATTGGTTTTCTaGGCGGGCTCCTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNKSLVF*AGSFFL
Trigger: GAGGAAAAAGGAGCCCGCCAAGAAAACCAATGACTT...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp GTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTGCTGGTTCTTAGATTaGTGTCTTGTCCCCGTAGTC +
Preference number: 5 (lower is better)
Translates to: VSKYSTGGIEKHIVGIGNCWFLD*CLVPVV
Trigger: GACTACGGGGACAAGACACAAATCTAAGAACCAGCA...ATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTGATGGGCACAGAGGTTaGAAATCAGCCTCCCTTAAA +
Preference number: 5 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSDGHRG*KSASLK
Trigger: TTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCATC...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGATCCAGAGATCTAGCTTaGGGATTTAGGCAAAATCTA +
Preference number: 5 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGSRDLA*GFRQNL
Trigger: TAGATTTTGCCTAAATCCCAAAGCTAGATCTCTGGA...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp AGGAGAAGAAACAAAAGGACACATAGAGGAAAGTCAGGGGTGCTGAGGACAAGAATGAGAAACACAAGTTaGGATGGATTAAGAGGTTCA +
Preference number: 5 (lower is better)
Translates to: RRRNKRTHRGKSGVLRTRMRNTS*DGLRGS
Trigger: TGAACCTCTTAATCCATCCAAACTTGTGTTTCTCAT...TCTTGTCCTCAGCACCCCTGACTTTCCTCTATGTGTCCTTTTGTTTCTTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp AATCCAGATGAATCTGTCGTTTCATTCAGAAACTTCTCTGCAAGAAGGATTCTCAAATCTGGAATTCCCTaGAGAGGGCTTAGCCATCCA +
Preference number: 5 (lower is better)
Translates to: NPDESVVSFRNFSARRILKSGIP*RGLSHP
Trigger: TGGATGGCTAAGCCCTCTCAAGGGAATTCCAGATTT...GAGAATCCTTCTTGCAGAGAAGTTTCTGAATGAAACGACAGATTCATCTGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCCTGGCTTCCCCAGGGTaGCTGTGTATATATAGAGTC +
Preference number: 5 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGLASPG*LCIYRV
Trigger: GACTCTATATATACACAGCAACCCTGGGGAAGCCAG...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGACTTTGGTTGTACAGTTaGATGACACGGTTTTTGCTT +
Preference number: 5 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGLWLYS*MTRFLL
Trigger: AAGCAAAAACCGTGTCATCAAACTGTACAACCAAAG...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGTTGCAGACAGATACCTaGCTGTATCCTCACATGGCA +
Preference number: 5 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWLQTDT*LYPHMA
Trigger: TGCCATGTGAGGATACAGCAAGGTATCTGTCTGCAA...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTCAGTCGAGCCCTGTTTaGAAGCTACTACTCGAACAG +
Preference number: 5 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCQSSPV*KLLLEQ
Trigger: CTGTTCGAGTAGTAGCTTCAAAACAGGGCTCGACTG...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTCTCTCTCGATCCTCTTaGTTATACTCCATGGCTGAG +
Preference number: 5 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSLSRSS*LYSMAE
Trigger: CTCAGCCATGGAGTATAACAAAGAGGATCGAGAGAG...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCCTCTCTCGATCCTCTTaGTTATACTCCATGGCTGAG +
Preference number: 5 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGLSRSS*LYSMAE
Trigger: CTCAGCCATGGAGTATAACAAAGAGGATCGAGAGAG...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAACTCTCTCGATCCTCTTaGTTATACTCCATGGCTGAG +
Preference number: 5 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKLSRSS*LYSMAE
Trigger: CTCAGCCATGGAGTATAACAAAGAGGATCGAGAGAG...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAAGTCATTGGTTTTCTaGGCGGGCTCCTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNKSLVF*AGSFFL
Trigger: GAGGAAAAAGGAGCCCGCCAAGAAAACCAATGACTT...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAAGTCATTGGTTTTCTaGGCGGGCTCCTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSKSLVF*AGSFFL
Trigger: GAGGAAAAAGGAGCCCGCCAAGAAAACCAATGACTT...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATTGCTGGTTCTTAGATTaGTGTCTTGTCCCCGTAGTC +
Preference number: 5 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNCWFLD*CLVPVV
Trigger: GACTACGGGGACAAGACACAAATCTAAGAACCAGCA...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATGCTGGTTCTTAGATTaGTGTCTTGTCCCCGTAGTC +
Preference number: 5 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKCWFLD*CLVPVV
Trigger: GACTACGGGGACAAGACACAAATCTAAGAACCAGCA...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATGATGGGCACAGAGGTTaGAAATCAGCCTCCCTTAAA +
Preference number: 5 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNDGHRG*KSASLK
Trigger: TTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCATC...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAGATGGGCACAGAGGTTaGAAATCAGCCTCCCTTAAA +
Preference number: 5 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKDGHRG*KSASLK
Trigger: TTTAAGGGAGGCTGATTTCAAACCTCTGTGCCCATC...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp CCAGAGCTAACTCTCTTTCAGAATTGCAAATGGAGTCCTGGTTCTGTTAAGGGAAAGGTATATTTTGACTaGAAGCTATCTTCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: PELTLFQNCKWSPGSVKGKVYFD*KLSSLV
Trigger: GACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT...TCCCTTAACAGAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTTAGCTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp TTTATTTCTCACAGTTCTAGAATCTGGGAAGTCCAAGCTCAGTGCACCAATACATCTAAGACTCCGATATaGACATGTGCAGCAGAAAAG +
Preference number: 5 (lower is better)
Translates to: FISHSSRIWEVQAQCTNTSKTPI*TCAAEK
Trigger: CTTTTCTGCTGCACATGTCAATATCGGAGTCTTAGA...TGTATTGGTGCACTGAGCTTGGACTTCCCAGATTCTAGAACTGTGAGAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCGTAGGAATCAGAAATTaGGGCTGGGTTCAGCTAGGC +
Preference number: 5 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFVGIRN*GWVQLG
Trigger: GCCTAGCTGAACCCAGCCCAAATTTCTGATTCCTAC...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp GAACTGGGATGGCAGAAACAATTAACGGCAAGTGAAGCACAAAACCGGAAAAGAGTAGTTTTGTTGTCTTaGGAATTGCAGGTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: ELGWQKQLTASEAQNRKRVVLLS*ELQVSN
Trigger: ATTGGAAACCTGCAATTCCAAAGACAACAAAACTAC...TCTTTTCCGGTTTTGTGCTTCACTTGCCGTTAATTGTTTCTGCCATCCCAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp TATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAGTAAAGTGGGAGTGCTATaGGCCAGTCATCCTTATGAT +
Preference number: 5 (lower is better)
Translates to: YSTGGIEKHIVGIGNFWSKVGVL*ASHPYD
Trigger: ATCATAAGGATGACTGGCCAATAGCACTCCCACTTT...ACTCCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS GCA 90 bp AAATACAAAGGGAGGACAAAATTGTATAATCTAATGCCGATAAACTaGAGGGAACTTAGCAAGCCCCGTTTGTTCAGATTCTTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: KYKGRTKLYNLMPIN*RELSKPRLFRFFSV
Trigger: CACAGAGAAGAATCTGAACAAACGGGGCTTGCTAAGTTCCCTGCAGTTTATCGGCATTAGATTATACAATTTTGTCCTCCCTTTGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414590.1
CDS-3UTR CAA 90 bp TTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCCTCTCTCGATCCTCTTaGTTATACTCCATGGCTGAG +
Preference number: 5 (lower is better)
Translates to: LKLSSLVRRRPSNSSNKFLSRSS*LYSMAE
Trigger: CTCAGCCATGGAGTATAACAAAGAGGATCGAGAGAG...GAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCAATTGCCTGAGCAAGTaGAAATCCAAAGCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGNCLSK*KSKAGD
Trigger: GTCACCAGCTTTGGATTTCAACTTGCTCAGGCAATT...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAAGTTCTGAGATGGTGTaGTTATATCTGCCTCTCATC +
Preference number: 5 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGISSEMV*LYLPLI
Trigger: GATGAGAGGCAGATATAACAACACCATCTCAGAACT...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGTTATCCAGAGAAATGTaGACAACATCAGACCACAAG +
Preference number: 5 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWLSREM*TTSDHK
Trigger: CTTGTGGTCTGATGTTGTCAACATTTCTCTGGATAA...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAAACTCTCTTTCAGAATaGCAAATGGAGTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGINSLSE*QMESWF
Trigger: GAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTT...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp GACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAAAACTCTCTTTCAGAATaGCAAATGGAGTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: DLKLSSLVRRRPSNSSNKNSLSE*QMESWF
Trigger: GAACCAGGACTCCATTTGCAATTCTGAAAGAGAGTT...TTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAAAAGATGGCACCTCTaGATGAGAAGGAAAGAGTTC +
Preference number: 5 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNKRWHL*MRRKEF
Trigger: GAACTCTTTCCTTCTCATCAAGAGGTGCCATCTTTT...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp ATAAATTCATATGTAGCTTTTCCCTTAAGTAATGTGAGGCACACCTCCATCCAACTTGTGTCACATTTGTaGGGCTACTGGCTAAATCAA +
Preference number: 5 (lower is better)
Translates to: INSYVAFPLSNVRHTSIQLVSHL*GYWLNQ
Trigger: TTGATTTAGCCAGTAGCCCAACAAATGTGACACAAG...TTGGATGGAGGTGTGCCTCACATTACTTAAGGGAAAAGCTACATATGAATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp AAGTTTGGATGGATTAAGAGGTTCAGGGATGAACATTCAGACAAGAACGAGTCAAAACAGATTTTCTGCTaGACAAGGCCACTAAAATCT +
Preference number: 5 (lower is better)
Translates to: KFGWIKRFRDEHSDKNESKQIFC*TRPLKS
Trigger: AGATTTTAGTGGCCTTGTCAAGCAGAAAATCTGTTT...TGACTCGTTCTTGTCTGAATGTTCATCCCTGAACCTCTTAATCCATCCAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTGGCCTTCCTTGCCTCTaGAATGAAATCTACATCCAT +
Preference number: 5 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCGLPCL*NEIYIH
Trigger: ATGGATGTAGATTTCATTCAAGAGGCAAGGAAGGCC...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTAGTTCTGAGATGGTGTaGTTATATCTGCCTCTCATC +
Preference number: 5 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCSSEMV*LYLPLI
Trigger: GATGAGAGGCAGATATAACAACACCATCTCAGAACT...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS-3UTR CAA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCTTATCCAGAGAAATGTaGACAACATCAGACCACAAG +
Preference number: 5 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGLSREM*TTSDHK
Trigger: CTTGTGGTCTGATGTTGTCAACATTTCTCTGGATAA...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp GTATGTAGGAATGTTCTCACACATTCTTGCTTTCTTGGTAAGCTTCTCAAACTATTATCCAGAGAAATGTaGACAACATCAGACCACAAG +
Preference number: 5 (lower is better)
Translates to: VCRNVLTHSCFLGKLLKLLSREM*TTSDHK
Trigger: CTTGTGGTCTGATGTTGTCAACATTTCTCTGGATAA...TAGTTTGAGAAGCTTACCAAGAAAGCAAGAATGTGTGAGAACATTCCTACATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp GTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTTTATCCAGAGAAATGTaGACAACATCAGACCACAAG +
Preference number: 5 (lower is better)
Translates to: VYFDLKLSSLVRRRPSNSLSREM*TTSDHK
Trigger: CTTGTGGTCTGATGTTGTCAACATTTCTCTGGATAA...ACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGAAGGTATATTTTGACTaGAAGCTATCTTCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWKVYFD*KLSSLV
Trigger: GACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTAAGGTATACTCGCTTTaGCTTTGTCCTAGCCACTTA +
Preference number: 5 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCKVYSL*LCPSHL
Trigger: TAAGTGGCTAGGACAAAGCAAAAGCGAGTATACCTT...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp ATTGATGTAAAAACACAAGTAGGTGTGGATGATGGACAGGGAATCTTAAATCTTTTTTCAAGTCTCTGCTaGTGTCACATTTGTTGGGCT +
Preference number: 5 (lower is better)
Translates to: IDVKTQVGVDDGQGILNLFSSLC*CHICWA
Trigger: AGCCCAACAAATGTGACACAAGCAGAGACTTGAAAA...AAGATTTAAGATTCCCTGTCCATCATCCACACCTACTTGTGTTTTTACATCAAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGATAAAATCTCCTTTCTaGAGCATGTCTTATTTCCCC +
Preference number: 5 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWIKSPF*SMSYFP
Trigger: GGGGAAATAAGACATGCTCAAGAAAGGAGATTTTAT...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTCCTCTATCACAGCAGTaGATGTTGGGATCAAATGAA +
Preference number: 5 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCPLSQQ*MLGSNE
Trigger: TTCATTTGATCCCAACATCAACTGCTGTGATAGAGG...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp TCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGACTATTTAGGTCCTTaGGTTGTACAGTTTGATGAC +
Preference number: 5 (lower is better)
Translates to: SSVSKYSTGGIEKHIVGIDYLGP*VVQFDD
Trigger: GTCATCAAACTGTACAACCAAAGGACCTAAATAGTC...TATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp AAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCATAGGCAATTTCTGGTTAAATCTTACTACATaGAGACCCAGGTTTGTTCTC +
Preference number: 5 (lower is better)
Translates to: KYSTGGIEKHIVGIGNFWLNLTT*RPRFVL
Trigger: GAGAACAAACCTGGGTCTCAATGTAGTAAGATTTAA...CCAGAAATTGCCTATGCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp AATTCTTCTGTCTCTAAGTATAGCACAGGAGGTATAGAAAAGCATATTGTAGGCAAGGTATATTTTGACTaGAAGCTATCTTCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: NSSVSKYSTGGIEKHIVGKVYFD*KLSSLV
Trigger: GACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT...GCCTACAATATGCTTTTCTATACCTCCTGTGCTATACTTAGAGACAGAAGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS-3UTR CAA 90 bp AAGGTATATTTTGACTTGAAGCTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTCTATCTGTAGTTTaGTTGTCTTTGGAATTGCAG +
Preference number: 5 (lower is better)
Translates to: KVYFDLKLSSLVRRRPSNSLSVV*LSLELQ
Trigger: CTGCAATTCCAAAGACAACAAAACTACAGATAGACT...ATTAGAAGGCCTTCTTCTGACAAGGGAAGATAGCTTCAAGTCAAAATATACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS-3UTR CAA 90 bp CTATCTTCCCTTGTCAGAAGAAGGCCTTCTAATAGTAGTAATAAATTCTTCTGTTATATCCTTCTAGCTTaGCTCTACTGGACATTAACG +
Preference number: 5 (lower is better)
Translates to: LSSLVRRRPSNSSNKFFCYILLA*LYWTLT
Trigger: CGTTAATGTCCAGTAGAGCAAAGCTAGAAGGATATA...ACAGAAGAATTTATTACTACTATTAGAAGGCCTTCTTCTGACAAGGGAAGATAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271417.8
CDS GCA 72 bp CGAGCTGCGCGCTCCGCTTGGATGGCGTCTCCAGGCTaGCACCGCGGCTGGCGCCCTCGGGCCGCGCCTGGC +
Preference number: 6 (lower is better)
Translates to: RAARSAWMASPG*HRGWRPRAAPG
Trigger: GCCAGGCGCGGCCCGAGGGCGCCAGCCGCGGTGGCAGCCTGGAGACGCCATCCAAGCGGAGCGCGCAGCTCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CCA 72 bp GGCGCTGCGCGGGCCGAGCTGCGCGCTCCGCTTGGATaGCGTCTCCAGGCTGCCACCGCGGCTGGCGCCCTC +
Preference number: 6 (lower is better)
Translates to: GAARAELRAPLG*RLQAATAAGAL
Trigger: GAGGGCGCCAGCCGCGGTGGCAGCCTGGAGACGCCATCCAAGCGGAGCGCGCAGCTCGGCCCGCGCAGCGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS TCA 72 bp GGTGCGCGTCCTCGGCGGGTCTGCGGCGCGCGGGGCTaGAGGCCCAGCCGCGGTCAGCATCGGTCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: GARPRRVCGARG*RPSRGQHRSGA
Trigger: AGCCCCTGACCGATGCTGACCGCGGCTGGGCCTTCAGCCCCGCGCGCCGCAGACCCGCCGAGGACGCGCACC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CCA 72 bp AGGAGGCGCTGCGCGGGCCGAGCTGCGCGCTCCGCTTaGATGGCGTCTCCAGGCTGCCACCGCGGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: RRRCAGRAARSA*MASPGCHRGWR
Trigger: GCGCCAGCCGCGGTGGCAGCCTGGAGACGCCATCCAAGCGGAGCGCGCAGCTCGGCCCGCGCAGCGCCTCCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 72 bp GCGGCTCCCGCCCCGCGCCTCGTGACTGTTGCCGTCTaGCCGGCGGGGCCGCTGGCCGTAGGAGTCAGCGAA +
Preference number: 6 (lower is better)
Translates to: AAPAPRLVTVAV*PAGPLAVGVSE
Trigger: TTCGCTGACTCCTACGGCCAGCGGCCCCGCCGGGCAGACGGCAACAGTCACGAGGCGCGGGGCGGGAGCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 72 bp TGGCGCCCTCGGGCCGCGCCTGGCGCTCCCGCGCGCTaGCCAGGTACGAGTGGTCGTATTTGGGTGCGGTGC +
Preference number: 6 (lower is better)
Translates to: WRPRAAPGAPAR*PGTSGRIWVRC
Trigger: GCACCGCACCCAAATACGACCACTCGTACCTGGGCAGCGCGCGGGAGCGCCAGGCGCGGCCCGAGGGCGCCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 72 bp AGGTGCCGGGCGGCGACCAAGCGTAGTAGGAGGCGCTaGGCGGGCCGAGCTGCGCGCTCCGCTTGGATGGCG +
Preference number: 6 (lower is better)
Translates to: RCRAATKRSRRR*AGRAARSAWMA
Trigger: CGCCATCCAAGCGGAGCGCGCAGCTCGGCCCGCGCAGCGCCTCCTACTACGCTTGGTCGCCGCCCGGCACCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CAA 90 bp CGCGCCTGGCGCTCCCGCGCGCTGCCCAGGTACGAGTGGTCGTATTaGGGTGCGGTGCCTGGCGTGCGGCTCACCAGCCGCGGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: RAWRSRALPRYEWSY*GAVPGVRLTSRGRC
Trigger: GCACCTGCCGCGGCTGGTGAGCCGCACGCCAGGCACCGCACCCAAATACGACCACTCGTACCTGGGCAGCGCGCGGGAGCGCCAGGCGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CCA 72 bp CGCGCCTGGCGCTCCCGCGCGCTGCCCAGGTACGAGTaGTCGTATTTGGGTGCGGTGCCTGGCGTGCGGCTC +
Preference number: 6 (lower is better)
Translates to: RAWRSRALPRYE*SYLGAVPGVRL
Trigger: GAGCCGCACGCCAGGCACCGCACCCAAATACGACCACTCGTACCTGGGCAGCGCGCGGGAGCGCCAGGCGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CCA 72 bp GCTCCCGCGCGCTGCCCAGGTACGAGTGGTCGTATTTaGGTGCGGTGCCTGGCGTGCGGCTCACCAGCCGCG +
Preference number: 6 (lower is better)
Translates to: APARCPGTSGRI*VRCLACGSPAA
Trigger: CGCGGCTGGTGAGCCGCACGCCAGGCACCGCACCCAAATACGACCACTCGTACCTGGGCAGCGCGCGGGAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CAA 72 bp CGCTCCCGCGCGCTGCCCAGGTACGAGTGGTCGTATTaGGGTGCGGTGCCTGGCGTGCGGCTCACCAGCCGC +
Preference number: 6 (lower is better)
Translates to: RSRALPRYEWSY*GAVPGVRLTSR
Trigger: GCGGCTGGTGAGCCGCACGCCAGGCACCGCACCCAAATACGACCACTCGTACCTGGGCAGCGCGCGGGAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 72 bp GGTACGAGTGGTCGTATTTGGGTGCGGTGCCTGGCGTaGGGCTCACCAGCCGCGGCAGGTGCGCGTCCTCGG +
Preference number: 6 (lower is better)
Translates to: GTSGRIWVRCLA*GSPAAAGARPR
Trigger: CCGAGGACGCGCACCTGCCGCGGCTGGTGAGCCGCACGCCAGGCACCGCACCCAAATACGACCACTCGTACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 72 bp CGCTGCCCAGGTACGAGTGGTCGTATTTGGGTGCGGTaGCTGGCGTGCGGCTCACCAGCCGCGGCAGGTGCG +
Preference number: 6 (lower is better)
Translates to: RCPGTSGRIWVR*LACGSPAAAGA
Trigger: CGCACCTGCCGCGGCTGGTGAGCCGCACGCCAGGCACCGCACCCAAATACGACCACTCGTACCTGGGCAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 72 bp CCTCCTGGTCGTCCTGCGACGAGCCGGCCTTGTAGGTaGCGGGCGGCGACCAAGCGTAGTAGGAGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: PPGRPATSRPCR*RAATKRSRRRC
Trigger: GCAGCGCCTCCTACTACGCTTGGTCGCCGCCCGGCACCTACAAGGCCGGCTCGTCGCAGGACGACCAGGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CCA 72 bp GCCCAGGTACGAGTGGTCGTATTTGGGTGCGGTGCCTaGCGTGCGGCTCACCAGCCGCGGCAGGTGCGCGTC +
Preference number: 6 (lower is better)
Translates to: AQVRVVVFGCGA*RAAHQPRQVRV
Trigger: GACGCGCACCTGCCGCGGCTGGTGAGCCGCACGCCAGGCACCGCACCCAAATACGACCACTCGTACCTGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 72 bp CCCAGCCGCGGTCAGCATCGGTCAGGGGCTCGCGGCTaGGGCTGCGCTGACCGTAGTACTCCTCCAAGGAGT +
Preference number: 6 (lower is better)
Translates to: PSRGQHRSGARG*GCADRSTPPRS
Trigger: ACTCCTTGGAGGAGTACTACGGTCAGCGCAGCCGCAGCCGCGAGCCCCTGACCGATGCTGACCGCGGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CCA 72 bp GGCCGTAGGAGTCAGCGAAGGCCGCCAGCTCGTCCATaGAAACGGCCGGCACCCCCGTGGCGAAGTTCTTCC +
Preference number: 6 (lower is better)
Translates to: GRRSQRRPPARP*KRPAPPWRSSS
Trigger: GGAAGAACTTCGCCACGGGGGTGCCGGCCGTTTCCATGGACGAGCTGGCGGCCTTCGCTGACTCCTACGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CCA 72 bp CCGCCAGCTCGTCCATGGAAACGGCCGGCACCCCCGTaGCGAAGTTCTTCCGCGACAGCATCTCCGACTTGG +
Preference number: 6 (lower is better)
Translates to: PPARPWKRPAPP*RSSSATASPTW
Trigger: CCAAGTCGGAGATGCTGTCGCGGAAGAACTTCGCCACGGGGGTGCCGGCCGTTTCCATGGACGAGCTGGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CAA 72 bp CCCGTGGCGAAGTTCTTCCGCGACAGCATCTCCGACTaGGAGCGCGGCTGGCTGTGCCTGAAGCTCTCTCGA +
Preference number: 6 (lower is better)
Translates to: PVAKFFRDSISD*ERGWLCLKLSR
Trigger: TCGAGAGAGCTTCAGGCACAGCCAGCCGCGCTCCAAGTCGGAGATGCTGTCGCGGAAGAACTTCGCCACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CAA 90 bp AGTAAGGGCCGGGGACACCGGAGACAGAGGGAGGGTACCCGGCCTTaGCTGCTTTCCCTGCTTCATACAAGGCTTGAGGGCAGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SKGRGHRRQREGTRP*LLSLLHTRLEGSSR
Trigger: CCTGCTGCTGCCCTCAAGCCTTGTATGAAGCAGGGAAAGCAGCAAAGGCCGGGTACCCTCCCTCTGTCTCCGGTGTCCCCGGCCCTTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS CAA 90 bp GACTTGGAGCGCGGCTGGCTGTGCCTGAAGCTCTCTCGATCCTCTTaGTTATACTCCATGGCTGAGGGCCCGCGGCTTGCCCCACTGCTG +
Preference number: 6 (lower is better)
Translates to: DLERGWLCLKLSRSS*LYSMAEGPRLAPLL
Trigger: CAGCAGTGGGGCAAGCCGCGGGCCCTCAGCCATGGAGTATAACAAAGAGGATCGAGAGAGCTTCAGGCACAGCCAGCCGCGCTCCAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CAA 72 bp GTGGAGTCACTTGGTGCCAAGGGAGGTGGATGCGGCTaGTCCATCAGCATGCCAGATGAGGGGGCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: VESLGAKGGGCG*SISMPDEGAPP
Trigger: GGGAGGAGCCCCCTCATCTGGCATGCTGATGGACAAGCCGCATCCACCTCCCTTGGCACCAAGTGACTCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS CAA 72 bp CGCGGCTGGCTGTGCCTGAAGCTCTCTCGATCCTCTTaGTTATACTCCATGGCTGAGGGCCCGCGGCTTGCC +
Preference number: 6 (lower is better)
Translates to: RGWLCLKLSRSS*LYSMAEGPRLA
Trigger: GGCAAGCCGCGGGCCCTCAGCCATGGAGTATAACAAAGAGGATCGAGAGAGCTTCAGGCACAGCCAGCCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS TCA 72 bp CCCGCGGCTTGCCCCACTGCTGCCTCCCATGACACCTaGCCAATAGTCAGGATTGCTCTCCAAGTCCCCAGA +
Preference number: 6 (lower is better)
Translates to: PAACPTAASHDT*PIVRIALQVPR
Trigger: TCTGGGGACTTGGAGAGCAATCCTGACTATTGGTCAGGTGTCATGGGAGGCAGCAGTGGGGCAAGCCGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS TCA 72 bp CTGAGGGCCCGCGGCTTGCCCCACTGCTGCCTCCCATaGCACCTGACCAATAGTCAGGATTGCTCTCCAAGT +
Preference number: 6 (lower is better)
Translates to: LRARGLPHCCLP*HLTNSQDCSPS
Trigger: ACTTGGAGAGCAATCCTGACTATTGGTCAGGTGTCATGGGAGGCAGCAGTGGGGCAAGCCGCGGGCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 72 bp CCTCCAGTGGAGTCACTTGGTGCCAAGGGAGGTGGATaGGGCTTGTCCATCAGCATGCCAGATGAGGGGGCT +
Preference number: 6 (lower is better)
Translates to: PPVESLGAKGGG*GLSISMPDEGA
Trigger: AGCCCCCTCATCTGGCATGCTGATGGACAAGCCGCATCCACCTCCCTTGGCACCAAGTGACTCCACTGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS CAA 90 bp CTTCCTCCAGTGGAGTCACTTGGTGCCAAGGGAGGTGGATGCGGCTaGTCCATCAGCATGCCAGATGAGGGGGCTCCTCCCAAAGGGACA +
Preference number: 6 (lower is better)
Translates to: LPPVESLGAKGGGCG*SISMPDEGAPPKGT
Trigger: TGTCCCTTTGGGAGGAGCCCCCTCATCTGGCATGCTGATGGACAAGCCGCATCCACCTCCCTTGGCACCAAGTGACTCCACTGGAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS GCA 72 bp GACACCGGAGACAGAGGGAGGGTACCCGGCCTTTGCTaGTTTCCCTGCTTCATACAAGGCTTGAGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: DTGDRGRVPGLC*FPCFIQGLRAA
Trigger: TGCTGCCCTCAAGCCTTGTATGAAGCAGGGAAAGCAGCAAAGGCCGGGTACCCTCCCTCTGTCTCCGGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS CAA 90 bp TCCGGTAACCTTTGCGAACACTGTGGCTTCCTCCAGTGGAGTCACTaGGTGCCAAGGGAGGTGGATGCGGCTTGTCCATCAGCATGCCAG +
Preference number: 6 (lower is better)
Translates to: SGNLCEHCGFLQWSH*VPREVDAACPSACQ
Trigger: CTGGCATGCTGATGGACAAGCCGCATCCACCTCCCTTGGCACCAAGTGACTCCACTGGAGGAAGCCACAGTGTTCGCAAAGGTTACCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS GCA 72 bp GACAGAGGGAGGGTACCCGGCCTTTGCTGCTTTCCCTaGTTCATACAAGGCTTGAGGGCAGCAGCAGGAATC +
Preference number: 6 (lower is better)
Translates to: DRGRVPGLCCFP*FIQGLRAAAGI
Trigger: GATTCCTGCTGCTGCCCTCAAGCCTTGTATGAAGCAGGGAAAGCAGCAAAGGCCGGGTACCCTCCCTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS GCA 72 bp GCGAACACTGTGGCTTCCTCCAGTGGAGTCACTTGGTaGCAAGGGAGGTGGATGCGGCTTGTCCATCAGCAT +
Preference number: 6 (lower is better)
Translates to: ANTVASSSGVTW*QGRWMRLVHQH
Trigger: ATGCTGATGGACAAGCCGCATCCACCTCCCTTGGCACCAAGTGACTCCACTGGAGGAAGCCACAGTGTTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS CCA 72 bp TGCTTCATACAAGGCTTGAGGGCAGCAGCAGGAATCTaGGCAGCATGGGCAGCGGACATAGCAGCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: CFIQGLRAAAGI*AAWAADIAAAA
Trigger: AGCTGCTGCTGCTATGTCCGCTGCCCATGCTGCCCAGATTCCTGCTGCTGCCCTCAAGCCTTGTATGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS CCA 72 bp TCCGGTAACCTTTGCGAACACTGTGGCTTCCTCCAGTaGAGTCACTTGGTGCCAAGGGAGGTGGATGCGGCT +
Preference number: 6 (lower is better)
Translates to: SGNLCEHCGFLQ*SHLVPREVDAA
Trigger: AGCCGCATCCACCTCCCTTGGCACCAAGTGACTCCACTGGAGGAAGCCACAGTGTTCGCAAAGGTTACCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000529071.5
CDS CAA 90 bp CCTGGTTGGAAAGTCATTCTGTGCCTGAAGCTCTCTCGATCCTCTTaGTTATACTCCATGGCTGAGGGCCCGCGGCTTGCCCCACTGCTG +
Preference number: 6 (lower is better)
Translates to: PGWKVILCLKLSRSS*LYSMAEGPRLAPLL
Trigger: CAGCAGTGGGGCAAGCCGCGGGCCCTCAGCCATGGAGTATAACAAAGAGGATCGAGAGAGCTTCAGGCACAGAATGACTTTCCAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469934.6
CDS TCA 72 bp GGAAGAGCATGGCCACCTTCTTCTTGTCGGGCACTGTaGCCTGAAGGCCTTCGACCATGGCTGTTAGCCAGA +
Preference number: 6 (lower is better)
Translates to: GRAWPPSSCRAL*PEGLRPWLLAR
Trigger: TCTGGCTAACAGCCATGGTCGAAGGCCTTCAGGTCACAGTGCCCGACAAGAAGAAGGTGGCCATGCTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS CCA 72 bp GAGGATGTTGAGAAGTGGCAGCGAAGCACAGTGGGCTaGAAGAGCATGGCCACCTTCTTCTTGTCGGGCACT +
Preference number: 6 (lower is better)
Translates to: EDVEKWQRSTVG*KSMATFFLSGT
Trigger: AGTGCCCGACAAGAAGAAGGTGGCCATGCTCTTCCAGCCCACTGTGCTTCGCTGCCACTTCTCAACATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS CAA 72 bp GTAGGGGTCCCATTCCAGGTTTCTCTTGCTGAGAGATaGGGCCCGGGTAGAGGACATGCCCAAGGATTCTCC +
Preference number: 6 (lower is better)
Translates to: VGVPFQVSLAER*GPGRGHAQGFS
Trigger: GGAGAATCCTTGGGCATGTCCTCTACCCGGGCCCAATCTCTCAGCAAGAGAAACCTGGAATGGGACCCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS TCA 72 bp AGCATGGCCACCTTCTTCTTGTCGGGCACTGTGACCTaGAGGCCTTCGACCATGGCTGTTAGCCAGAAGAGA +
Preference number: 6 (lower is better)
Translates to: SMATFFLSGTVT*RPSTMAVSQKR
Trigger: TCTCTTCTGGCTAACAGCCATGGTCGAAGGCCTTCAGGTCACAGTGCCCGACAAGAAGAAGGTGGCCATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS TCA 72 bp CCAAGGATTCTCCCATGCGATCCTGGCAGTAGGACTTaGACTTCCACTGCACAACTGCAGGCTGATGGGAGG +
Preference number: 6 (lower is better)
Translates to: PRILPCDPGSRT*TSTAQLQADGR
Trigger: CCTCCCATCAGCCTGCAGTTGTGCAGTGGAAGTTCAAGTCCTACTGCCAGGATCGCATGGGAGAATCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS CAA 90 bp ACAATCCAAGTAGGGGTCCCATTCCAGGTTTCTCTTGCTGAGAGATaGGGCCCGGGTAGAGGACATGCCCAAGGATTCTCCCATGCGATC +
Preference number: 6 (lower is better)
Translates to: TIQVGVPFQVSLAER*GPGRGHAQGFSHAI
Trigger: GATCGCATGGGAGAATCCTTGGGCATGTCCTCTACCCGGGCCCAATCTCTCAGCAAGAGAAACCTGGAATGGGACCCCTACTTGGATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS CAA 72 bp AAAGTCATTCTGTGCCTGAAGCTCTCTCGATCCTCTTaGTTATACTCCATGGCTGAGGGCCCGCGGCTTGCC +
Preference number: 6 (lower is better)
Translates to: KVILCLKLSRSS*LYSMAEGPRLA
Trigger: GGCAAGCCGCGGGCCCTCAGCCATGGAGTATAACAAAGAGGATCGAGAGAGCTTCAGGCACAGAATGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469934.6
CDS TCA 72 bp GTAGAAATCTCCCAGGGTGACAGTCGAGCCCTGTTTTaGAGCTACTACTCGAACAGTCCTCCTGCTGTCCAA +
Preference number: 6 (lower is better)
Translates to: VEISQGDSRALF*SYYSNSPPAVQ
Trigger: TTGGACAGCAGGAGGACTGTTCGAGTAGTAGCTTCAAAACAGGGCTCGACTGTCACCCTGGGAGATTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS GCA 72 bp GATTGCTCTCCAAGTCCCCAGACACAGGGAACTGCTTaGTTCTCATCTGATGGAAAGACTGGCGGAAATTGC +
Preference number: 6 (lower is better)
Translates to: DCSPSPQTQGTA*FSSDGKTGGNC
Trigger: GCAATTTCCGCCAGTCTTTCCATCAGATGAGAAGCAAGCAGTTCCCTGTGTCTGGGGACTTGGAGAGCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS GCA 72 bp AGCCCTGTTTTGAAGCTACTACTCGAACAGTCCTCCTaGTGTCCAAACAATCCAAGTAGGGGTCCCATTCCA +
Preference number: 6 (lower is better)
Translates to: SPVLKLLLEQSS*CPNNPSRGPIP
Trigger: TGGAATGGGACCCCTACTTGGATTGTTTGGACAGCAGGAGGACTGTTCGAGTAGTAGCTTCAAAACAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000271417.8
ENST00000469934.6
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
ENST00000529387.5
CDS CCA 72 bp AGAAATGTTGACAACATCAGACCACAAGGGACATCCTaGTTGGAAAGTCATTCTGTGCCTGAAGCTCTCTCG +
Preference number: 6 (lower is better)
Translates to: RNVDNIRPQGTS*LESHSVPEALS
Trigger: CGAGAGAGCTTCAGGCACAGAATGACTTTCCAACCAGGATGTCCCTTGTGGTCTGATGTTGTCAACATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469934.6
CDS CCA 72 bp ATGTTGACAACATCAGACCACAAGGGACATCCTGGTTaGAAAGTCATTCCAACACCAGCAGTTCCACTGAGT +
Preference number: 6 (lower is better)
Translates to: MLTTSDHKGHPG*KVIPTPAVPLS
Trigger: ACTCAGTGGAACTGCTGGTGTTGGAATGACTTTCCAACCAGGATGTCCCTTGTGGTCTGATGTTGTCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529387.5
CDS CAA 72 bp AATGTTGACAACATCAGACCACAAGGGACATCCTGGTaGGAAAGTCATTCTGTGCCTGAAGCTCTCTCGATC +
Preference number: 6 (lower is better)
Translates to: NVDNIRPQGTSW*ESHSVPEALSI
Trigger: GATCGAGAGAGCTTCAGGCACAGAATGACTTTCCAACCAGGATGTCCCTTGTGGTCTGATGTTGTCAACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469934.6
CDS CCA 72 bp ATGTTGACAACATCAGACCACAAGGGACATCCTGGTTaGAAAGTCATTGGTTTTCTTGGCGGGCTCCTTTTT +
Preference number: 6 (lower is better)
Translates to: MLTTSDHKGHPG*KVIGFLGGLLF
Trigger: AAAAAGGAGCCCGCCAAGAAAACCAATGACTTTCCAACCAGGATGTCCCTTGTGGTCTGATGTTGTCAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271417.8
ENST00000525740.5
ENST00000526687.1
ENST00000528703.5
ENST00000529071.5
CDS CCA 72 bp AGAAATGTTGACAACATCAGACCACAAGGGACATCCTaGTTGGAAAGTCATTCCAACACCAGCAGTTCCACT +
Preference number: 6 (lower is better)
Translates to: RNVDNIRPQGTS*LESHSNTSSST
Trigger: AGTGGAACTGCTGGTGTTGGAATGACTTTCCAACCAGGATGTCCCTTGTGGTCTGATGTTGTCAACATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529387.5
CDS CAA 72 bp ATGCCGATAAACTGCAGGGAACTTAGCAAGCCCCGTTaGTTCAGATTCTTCTCTGTGTTCTCATGTCTTCAT +
Preference number: 6 (lower is better)
Translates to: MPINCRELSKPR*FRFFSVFSCLH
Trigger: ATGAAGACATGAGAACACAGAGAAGAATCTGAACAAACGGGGCTTGCTAAGTTCCCTGCAGTTTATCGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414590.1