RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL36G (Homo sapiens)

Ensembl gene IDs: ENSG00000136688

Ensembl transcript IDs: ENST00000259205.5, ENST00000376489.6, ENST00000447128.5

Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCAAAACAGAAACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTaGGTAACGCGCATGAGCTCTGAAGCATCTTCATACCCACCCCTA +
Preference number: 1 (lower is better)
Translates to: SKTETEISSVLVMPS*VTRMSSEASSYPPL
Trigger: TAGGGGTGGGTATGAAGATGCTTCAGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGTTTCTGTTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR TCA 90 bp ACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTCTaGGGCCACATCCTGTTCTTCAGTTGCTATGAAGTAATTGCTTCT +
Preference number: 1 (lower is better)
Translates to: TSLRGQPYTTQLSCF*GHILFFSCYEVIAS
Trigger: AGAAGCAATTACTTCATAGCAACTGAAGAACAGGATGTGGCCTCAGAAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR CCA 90 bp AGTGTTTGGTCTTTGAGTCTTAAAGTCACTCATGCAGATGCCTTGTaGCCTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCA +
Preference number: 1 (lower is better)
Translates to: SVWSLSLKVTHADAL*PTQHQLERTALYHP
Trigger: TGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAGGCCACAAGGCATCTGCATGAGTGACTTTAAGACTCAAAGACCAAACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR-3UTR TCA 90 bp ACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTCAGCTCTCCTGCTTCTaGGGCCACATCCTGTTCTTC +
Preference number: 2 (lower is better)
Translates to: TEISSVLVMPSWVTRMSSQLSCF*GHILFF
Trigger: GAAGAACAGGATGTGGCCTCAGAAGCAGGAGAGCTG...AGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR-3UTR CCA 90 bp AGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTGAAGCATCTCATGCAGATGCCTTGTaGCCTACACAGCACCAGCTT +
Preference number: 2 (lower is better)
Translates to: SSVLVMPSWVTRMSSEASHADAL*PTQHQL
Trigger: AAGCTGGTGCTGTGTAGGCCACAAGGCATCTGCATG...AGATGCTTCAGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCACAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR-3UTR CCA 90 bp AAAACAGAAACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCCATGCAGATGCCTTGTaGCCTACACAGCACCAGCTT +
Preference number: 2 (lower is better)
Translates to: KTETEISSVLVMPSWVTRHADAL*PTQHQL
Trigger: AAGCTGGTGCTGTGTAGGCCACAAGGCATCTGCATG...GCGCGTTACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGTTTCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR CAA 90 bp CTCAGTGTTTGGTCTTTGAGTCTTAAAGTCACTCATGCAGATGCCTaGTGGCCTACACAGCACCAGCTTGAGAGGACAGCCTTATACCAC +
Preference number: 2 (lower is better)
Translates to: LSVWSLSLKVTHADA*WPTQHQLERTALYH
Trigger: GTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAGGCCACAAGGCATCTGCATGAGTGACTTTAAGACTCAAAGACCAAACACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR-3UTR TCA 90 bp CTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTCGTTCTTCAGTTGCTATaGAGTAATTGCTTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: LHSTSLRGQPYTTQLSCFVLQLL*SNCFFF
Trigger: GAAGAAGAAGCAATTACTTCATAGCAACTGAAGAAC...GAAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR-3UTR GCA 90 bp CAGATGCCTTGTGGCCTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCATCCTGTTCTTCAGTTaGTATGAAGTAATTGCTTCT +
Preference number: 2 (lower is better)
Translates to: QMPCGLHSTSLRGQPYTTILFFS*YEVIAS
Trigger: AGAAGCAATTACTTCATAGCAACTGAAGAACAGGAT...GGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAGGCCACAAGGCATCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR-3UTR GCA 90 bp TCACTCATGCAGATGCCTTGTGGCCTACACAGCACCAGCTTGAGAGGACAGCCTATCCTGTTCTTCAGTTaGTATGAAGTAATTGCTTCT +
Preference number: 2 (lower is better)
Translates to: SLMQMPCGLHSTSLRGQPILFFS*YEVIAS
Trigger: AGAAGCAATTACTTCATAGCAACTGAAGAACAGGAT...AGGCTGTCCTCTCAAGCTGGTGCTGTGTAGGCCACAAGGCATCTGCATGAGTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR-3UTR TCA 90 bp TTACAAGGTCTTAATGCTAAGAAGGTTCTATTACACACAATGAGGTATATTGGCCAGCTCTCCTGCTTCTaGGGCCACATCCTGTTCTTC +
Preference number: 2 (lower is better)
Translates to: LQGLNAKKVLLHTMRYIGQLSCF*GHILFF
Trigger: GAAGAACAGGATGTGGCCTCAGAAGCAGGAGAGCTG...GCCAATATACCTCATTGTGTGTAATAGAACCTTCTTAGCATTAAGACCTTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR-3UTR CCA 90 bp TTACAAGGTCTTAATGCTAAGAAGGTTCTATTACACACAATGAGGTATATTGGCCTAGTCATGCCATCGTaGGTAACGCGCATGAGCTCT +
Preference number: 2 (lower is better)
Translates to: LQGLNAKKVLLHTMRYIGLVMPS*VTRMSS
Trigger: AGAGCTCATGCGCGTTACCCACGATGGCATGACTAG...GCCAATATACCTCATTGTGTGTAATAGAACCTTCTTAGCATTAAGACCTTGTAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR-3UTR TCA 90 bp TTACAAGGTCTTAATGCTAAGAAGGTTCTATTACACACAATGAGGTATATTGGCTACACAGCACCAGCTTaGGAGGACAGCCTTATACCA +
Preference number: 2 (lower is better)
Translates to: LQGLNAKKVLLHTMRYIGYTAPA*EDSLIP
Trigger: TGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTA...GCCAATATACCTCATTGTGTGTAATAGAACCTTCTTAGCATTAAGACCTTGTAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR-3UTR TCA 90 bp ACCCCTAGAAGAAAGCTCAGTGTTTGGTCTTTGAGTCTTAAAGTCACTCATGCAGTTCTTCAGTTGCTATaGAGTAATTGCTTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: TPRRKLSVWSLSLKVTHAVLQLL*SNCFFF
Trigger: GAAGAAGAAGCAATTACTTCATAGCAACTGAAGAAC...TGCATGAGTGACTTTAAGACTCAAAGACCAAACACTGAGCTTTCTTCTAGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR-3UTR CAA 90 bp CCTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTATGATAACAGCAGCCTaGCCCCTGTCTCAGCACCAG +
Preference number: 3 (lower is better)
Translates to: PTQHQLERTALYHPALLLMITAA*PLSQHQ
Trigger: CTGGTGCTGAGACAGGGGCAAGGCTGCTGTTATCAT...AAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR TCA 72 bp TCATGCAGATGCCTTGTGGCCTACACAGCACCAGCTTaGGAGGACAGCCTTATACCACCCAGCTCTCCTGCT +
Preference number: 3 (lower is better)
Translates to: SCRCLVAYTAPA*EDSLIPPSSPA
Trigger: AGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAGGCCACAAGGCATCTGCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR-3UTR CAA 90 bp ACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTATGATAACAGCAGCCTaGCCCCTGTCTCAGCACCAG +
Preference number: 3 (lower is better)
Translates to: TEISSVLVMPSWVTRMSSMITAA*PLSQHQ
Trigger: CTGGTGCTGAGACAGGGGCAAGGCTGCTGTTATCAT...AGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR-3UTR CAA 90 bp ACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTACTCATGCAGATGCCTaGTGGCCTACACAGCACCAG +
Preference number: 3 (lower is better)
Translates to: TEISSVLVMPSWVTRMSSTHADA*WPTQHQ
Trigger: CTGGTGCTGTGTAGGCCACAAGGCATCTGCATGAGT...AGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR TCA 72 bp AGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTCTaGGGCCACATCCTGTTCTTCAGTTGCTATGAAGTA +
Preference number: 3 (lower is better)
Translates to: RGQPYTTQLSCF*GHILFFSCYEV
Trigger: TACTTCATAGCAACTGAAGAACAGGATGTGGCCTCAGAAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR CCA 72 bp GAAACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTaGGTAACGCGCATGAGCTCTGAAGCATCTTCATAC +
Preference number: 3 (lower is better)
Translates to: ETEISSVLVMPS*VTRMSSEASSY
Trigger: GTATGAAGATGCTTCAGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR-3UTR CAA 90 bp ACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTCTGGTAGACGAAAACACATaGGGAACCAGAAACTTTAAG +
Preference number: 3 (lower is better)
Translates to: TQHQLERTALYHPALLLLVDENT*GTRNFK
Trigger: CTTAAAGTTTCTGGTTCCCAATGTGTTTTCGTCTAC...CAGAAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR-3UTR CAA 90 bp ACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTGTAGACGAAAACACATaGGGAACCAGAAACTTTAAG +
Preference number: 3 (lower is better)
Translates to: TEISSVLVMPSWVTRMSSVDENT*GTRNFK
Trigger: CTTAAAGTTTCTGGTTCCCAATGTGTTTTCGTCTAC...AGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR TCA 90 bp CCTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTTACAGTCCAGGGGACTaGATCGTGGCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PTQHQLERTALYHPALLLYSPGD*IVAPAA
Trigger: AGCTGCTGGAGCCACGATTCAGTCCCCTGGACTGTA...AAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR TCA 90 bp ACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTCTGTCTTGGAGGAGGCAATaGACCAGTCCGGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: TQHQLERTALYHPALLLLSWRRQ*TSPGRP
Trigger: TGGCCTTCCCGGACTGGTTCATTGCCTCCTCCAAGA...CAGAAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp CAGATGCCTTGTGGCCTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGGGGACTGAATCGTaGCTCCAGCAGCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QMPCGLHSTSLRGQPYTTQGTES*LQQLPR
Trigger: CCTTGGAAGCTGCTGGAGCCACGATTCAGTCCCCTG...GGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAGGCCACAAGGCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259205.5
CDS-3UTR TCA 90 bp CCACCCAGCTCTCCTGCTTCTGAGGCCACATCCTGTTCTTCAGTTGCTATGAAGTACAGTCCAGGGGACTaGATCGTGGCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PPSSPASEATSCSSVAMKYSPGD*IVAPAA
Trigger: AGCTGCTGGAGCCACGATTCAGTCCCCTGGACTGTA...CTTCATAGCAACTGAAGAACAGGATGTGGCCTCAGAAGCAGGAGAGCTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR TCA 90 bp ACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTTCTTGGAGGAGGCAATaGACCAGTCCGGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: TEISSVLVMPSWVTRMSSSWRRQ*TSPGRP
Trigger: TGGCCTTCCCGGACTGGTTCATTGCCTCCTCCAAGA...AGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR TCA 90 bp TCACTCATGCAGATGCCTTGTGGCCTACACAGCACCAGCTTGAGAGGACAGCCTCAGCTCTCCTGCTTCTaGGGCCACATCCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLMQMPCGLHSTSLRGQPQLSCF*GHILFF
Trigger: GAAGAACAGGATGTGGCCTCAGAAGCAGGAGAGCTG...AGGCTGTCCTCTCAAGCTGGTGCTGTGTAGGCCACAAGGCATCTGCATGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR GCA 90 bp CTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTCGTCACTTCGTGGAACTaGCACAAGGTTCTGACCCTG +
Preference number: 4 (lower is better)
Translates to: LHSTSLRGQPYTTQLSCFVTSWN*HKVLTL
Trigger: CAGGGTCAGAACCTTGTGGCAGTTCCACGAAGTGAC...GAAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259205.5
CDS-3UTR GCA 90 bp CTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTCAAATGGGATCCCCTCTaGCTTGCTCAAGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LHSTSLRGQPYTTQLSCFKWDPL*LAQEPL
Trigger: CAGAGGCTCTTGAGCAAGGCAGAGGGGATCCCATTT...GAAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp ACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTCTGACCATCAGCGTCTCCTaGAGTGCCTCTCATAGTGTG +
Preference number: 4 (lower is better)
Translates to: TQHQLERTALYHPALLLLTISVS*SASHSV
Trigger: CACACTATGAGAGGCACTCCAGGAGACGCTGATGGT...CAGAAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp CCTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTTTCACGGGCTCGGGTTaGCCATACAGATCCATGATC +
Preference number: 4 (lower is better)
Translates to: PTQHQLERTALYHPALLLFTGSG*PYRSMI
Trigger: GATCATGGATCTGTATGGCCAACCCGAGCCCGTGAA...AAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp CAGATGCCTTGTGGCCTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCGTCAGAATGATGGGCTaGTCTCTCTTGGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: QMPCGLHSTSLRGQPYTTVRMMG*SLLEEA
Trigger: TGCCTCCTCCAAGAGAGACCAGCCCATCATTCTGAC...GGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAGGCCACAAGGCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp CTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTCCTAGTCATGCCATCGTaGGTAACGCGCATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LHSTSLRGQPYTTQLSCFLVMPS*VTRMSS
Trigger: AGAGCTCATGCGCGTTACCCACGATGGCATGACTAG...GAAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR GCA 90 bp AAGTCACTCATGCAGATGCCTTGTGGCCTACACAGCACCAGCTTGAGAGGACAGAAATGGGATCCCCTCTaGCTTGCTCAAGAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: KSLMQMPCGLHSTSLRGQKWDPL*LAQEPL
Trigger: CAGAGGCTCTTGAGCAAGGCAGAGGGGATCCCATTT...CTGTCCTCTCAAGCTGGTGCTGTGTAGGCCACAAGGCATCTGCATGAGTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp CTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTCCACACTGTCACTTCGTaGAACTGCCACAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LHSTSLRGQPYTTQLSCFHTVTS*NCHKVL
Trigger: CAGAACCTTGTGGCAGTTCCACGAAGTGACAGTGTG...GAAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259205.5
CDS-3UTR CCA 90 bp TCACTCATGCAGATGCCTTGTGGCCTACACAGCACCAGCTTGAGAGGACAGCCTAGGTCCTACCAGTCTTaGCACGGTAGAAAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLMQMPCGLHSTSLRGQPRSYQS*HGRKGR
Trigger: CCTTCCTTTTCTACCGTGCCAAGACTGGTAGGACCT...AGGCTGTCCTCTCAAGCTGGTGCTGTGTAGGCCACAAGGCATCTGCATGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp ACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTGTCAGAATGATGGGCTaGTCTCTCTTGGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TEISSVLVMPSWVTRMSSVRMMG*SLLEEA
Trigger: TGCCTCCTCCAAGAGAGACCAGCCCATCATTCTGAC...AGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp CCACCCAGCTCTCCTGCTTCTGAGGCCACATCCTGTTCTTCAGTTGCTATGAAGCATGCAGATGCCTTGTaGCCTACACAGCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: PPSSPASEATSCSSVAMKHADAL*PTQHQL
Trigger: AAGCTGGTGCTGTGTAGGCCACAAGGCATCTGCATG...CTTCATAGCAACTGAAGAACAGGATGTGGCCTCAGAAGCAGGAGAGCTGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp ACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTCATGCAGATGCCTTGTaGCCTACACAGCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: TEISSVLVMPSWVTRMSSHADAL*PTQHQL
Trigger: AAGCTGGTGCTGTGTAGGCCACAAGGCATCTGCATG...AGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR TCA 90 bp AGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTGAAGCATCTGTTCTGAAGTCAGAATaGTGGGCTGGTCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SSVLVMPSWVTRMSSEASVLKSE*WAGLSW
Trigger: CCAAGAGAGACCAGCCCATCATTCTGACTTCAGAAC...AGATGCTTCAGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCACAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR GCA 90 bp ACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTAGTCACTCATGCAGATaGCTTGTGGCCTACACAGCA +
Preference number: 4 (lower is better)
Translates to: TEISSVLVMPSWVTRMSSSHSCR*LVAYTA
Trigger: TGCTGTGTAGGCCACAAGGCATCTGCATGAGTGACT...AGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp CTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTCGGTTGTCTCAGCACCTaGCAAGAAAGGGTCTTTATC +
Preference number: 4 (lower is better)
Translates to: LHSTSLRGQPYTTQLSCFGCLST*QERVFI
Trigger: GATAAAGACCCTTTCTTGCCAGGTGCTGAGACAACC...GAAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp ACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTAGGTCCTACCAGTCTTaGCACGGTAGAAAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: TEISSVLVMPSWVTRMSSRSYQS*HGRKGR
Trigger: CCTTCCTTTTCTACCGTGCCAAGACTGGTAGGACCT...AGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR GCA 90 bp CAGATGCCTTGTGGCCTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCTTCTGCTCTTTTAGCTaGAATGTGGGCTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: QMPCGLHSTSLRGQPYTTFCSFS*NVGCSP
Trigger: TGGAGAACAGCCCACATTGCAGCTAAAAGAGCAGAA...GGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAGGCCACAAGGCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp AAAACAGAAACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCGTGCCTCTCATAGTGTaGTTGTCTCAGCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: KTETEISSVLVMPSWVTRVPLIV*LSQHLA
Trigger: TGCCAGGTGCTGAGACAACCACACTATGAGAGGCAC...GCGCGTTACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGTTTCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp CCTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTCTTTTAGCTGCAATGTaGGCTGTTCTCCAACCTTCT +
Preference number: 4 (lower is better)
Translates to: PTQHQLERTALYHPALLLLLAAM*AVLQPS
Trigger: AGAAGGTTGGAGAACAGCCCACATTGCAGCTAAAAG...AAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp TTATACCACCCAGCTCTCCTGCTTCTGAGGCCACATCCTGTTCTTCAGTTGCTACTAGTCATGCCATCGTaGGTAACGCGCATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LYHPALLLLRPHPVLQLLLVMPS*VTRMSS
Trigger: AGAGCTCATGCGCGTTACCCACGATGGCATGACTAG...TAGCAACTGAAGAACAGGATGTGGCCTCAGAAGCAGGAGAGCTGGGTGGTATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
3UTR CAA 72 bp TGGTCTTTGAGTCTTAAAGTCACTCATGCAGATGCCTaGTGGCCTACACAGCACCAGCTTGAGAGGACAGCC +
Preference number: 4 (lower is better)
Translates to: WSLSLKVTHADA*WPTQHQLERTA
Trigger: GGCTGTCCTCTCAAGCTGGTGCTGTGTAGGCCACAAGGCATCTGCATGAGTGACTTTAAGACTCAAAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR TCA 90 bp AGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTGAAGCATCTGGCCATACAGATCCATaGTCTTCTGCTCTTTTAGCT +
Preference number: 4 (lower is better)
Translates to: SSVLVMPSWVTRMSSEASGHTDP*SSALLA
Trigger: AGCTAAAAGAGCAGAAGATCATGGATCTGTATGGCC...AGATGCTTCAGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCACAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR TCA 90 bp TTATACCACCCAGCTCTCCTGCTTCTGAGGCCACATCCTGTTCTTCAGTTGCTATACACAGCACCAGCTTaGGAGGACAGCCTTATACCA +
Preference number: 4 (lower is better)
Translates to: LYHPALLLLRPHPVLQLLYTAPA*EDSLIP
Trigger: TGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTA...TAGCAACTGAAGAACAGGATGTGGCCTCAGAAGCAGGAGAGCTGGGTGGTATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp GTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTGAAGCATCTTCATACGGTTGTCTCAGCACCTaGCAAGAAAGGGTCTTTATC +
Preference number: 4 (lower is better)
Translates to: VLVMPSWVTRMSSEASSYGCLST*QERVFI
Trigger: GATAAAGACCCTTTCTTGCCAGGTGCTGAGACAACC...GTATGAAGATGCTTCAGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR TCA 90 bp CTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTCAGGGTCCACACTTGCTaGTTCAAATCATTAATAGTC +
Preference number: 4 (lower is better)
Translates to: LHSTSLRGQPYTTQLSCFRVHTC*FKSLIV
Trigger: GACTATTAATGATTTGAATCAGCAAGTGTGGACCCT...GAAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259205.5
CDS-3UTR TCA 90 bp GTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTGAAGCATCTTCATACGGCCATACAGATCCATaGTCTTCTGCTCTTTTAGCT +
Preference number: 4 (lower is better)
Translates to: VLVMPSWVTRMSSEASSYGHTDP*SSALLA
Trigger: AGCTAAAAGAGCAGAAGATCATGGATCTGTATGGCC...GTATGAAGATGCTTCAGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR TCA 90 bp TTATACCACCCAGCTCTCCTGCTTCTGAGGCCACATCCTGTTCTTCAGTTGCTAAACAGCAACAGTGATTaGTTGATAGACGGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: LYHPALLLLRPHPVLQLLNSNSD*LIDGPS
Trigger: GGAAGGGCCGTCTATCAATCAATCACTGTTGCTGTT...TAGCAACTGAAGAACAGGATGTGGCCTCAGAAGCAGGAGAGCTGGGTGGTATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376489.6
CDS-3UTR GCA 90 bp GTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTGAAGCATCTTCATACTTCTGCTCTTTTAGCTaGAATGTGGGCTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VLVMPSWVTRMSSEASSYFCSFS*NVGCSP
Trigger: TGGAGAACAGCCCACATTGCAGCTAAAAGAGCAGAA...GTATGAAGATGCTTCAGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR TCA 90 bp ACCCCTAGAAGAAAGCTCAGTGTTTGGTCTTTGAGTCTTAAAGTCACTCATGCACAGCTCTCCTGCTTCTaGGGCCACATCCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: TPRRKLSVWSLSLKVTHAQLSCF*GHILFF
Trigger: GAAGAACAGGATGTGGCCTCAGAAGCAGGAGAGCTG...TGCATGAGTGACTTTAAGACTCAAAGACCAAACACTGAGCTTTCTTCTAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp GTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTGAAGCATCTTCATACTTGCTCAAGAGCCTCTaGATACTTGCATGTGATAAC +
Preference number: 4 (lower is better)
Translates to: VLVMPSWVTRMSSEASSYLLKSL*ILACDN
Trigger: GTTATCACATGCAAGTATCCAGAGGCTCTTGAGCAA...GTATGAAGATGCTTCAGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp ATAAAGCAAAACAGAAACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTGGGTTTCACGGGCTCGGGTTaGCCATACAGATCCATGATC +
Preference number: 4 (lower is better)
Translates to: IKQNRNRDQLCASHAIVGFTGSG*PYRSMI
Trigger: GATCATGGATCTGTATGGCCAACCCGAGCCCGTGAA...ACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGTTTCTGTTTTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp ACCCCTAGAAGAAAGCTCAGTGTTTGGTCTTTGAGTCTTAAAGTCACTCATGCACCACAGACTCAAGGGTaGAGGTCCTACCAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: TPRRKLSVWSLSLKVTHAPQTQG*RSYQSW
Trigger: CCAAGACTGGTAGGACCTCCACCCTTGAGTCTGTGG...TGCATGAGTGACTTTAAGACTCAAAGACCAAACACTGAGCTTTCTTCTAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp AGAAGAAAGCTCAGTGTTTGGTCTTTGAGTCTTAAAGTCACTCATGCAGATGCCCCACAGACTCAAGGGTaGAGGTCCTACCAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: RRKLSVWSLSLKVTHADAPQTQG*RSYQSW
Trigger: CCAAGACTGGTAGGACCTCCACCCTTGAGTCTGTGG...GGCATCTGCATGAGTGACTTTAAGACTCAAAGACCAAACACTGAGCTTTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR TCA 90 bp GTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTGAAGCATCTTCATACCATATAAAGACTGGATaGTATCATCCCAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: VLVMPSWVTRMSSEASSYHIKTG*YHPKRE
Trigger: TTCCCTCTTGGGATGATATCATCCAGTCTTTATATG...GTATGAAGATGCTTCAGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR GCA 90 bp GTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTGAAGCATCTTCATACAGATCCATGATCTTCTaGTCTTTTAGCTGCAATGTG +
Preference number: 4 (lower is better)
Translates to: VLVMPSWVTRMSSEASSYRSMIF*SFSCNV
Trigger: CACATTGCAGCTAAAAGAGCAGAAGATCATGGATCT...GTATGAAGATGCTTCAGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR GCA 90 bp CCTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTATCCTGTTCTTCAGTTaGTATGAAGTAATTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PTQHQLERTALYHPALLLILFFS*YEVIAS
Trigger: AGAAGCAATTACTTCATAGCAACTGAAGAACAGGAT...AAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR GCA 90 bp ATAAAGCAAAACAGAAACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTGGGTAGTCACTCATGCAGATaGCTTGTGGCCTACACAGCA +
Preference number: 4 (lower is better)
Translates to: IKQNRNRDQLCASHAIVGSHSCR*LVAYTA
Trigger: TGCTGTGTAGGCCACAAGGCATCTGCATGAGTGACT...ACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGTTTCTGTTTTGCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp AGAAGAAAGCTCAGTGTTTGGTCTTTGAGTCTTAAAGTCACTCATGCAGATGCCACCATCAGCGTCTCCTaGAGTGCCTCTCATAGTGTG +
Preference number: 4 (lower is better)
Translates to: RRKLSVWSLSLKVTHADATISVS*SASHSV
Trigger: CACACTATGAGAGGCACTCCAGGAGACGCTGATGGT...GGCATCTGCATGAGTGACTTTAAGACTCAAAGACCAAACACTGAGCTTTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp TTATACCACCCAGCTCTCCTGCTTCTGAGGCCACATCCTGTTCTTCAGTTGCTATTGCTCAAGAGCCTCTaGATACTTGCATGTGATAAC +
Preference number: 4 (lower is better)
Translates to: LYHPALLLLRPHPVLQLLLLKSL*ILACDN
Trigger: GTTATCACATGCAAGTATCCAGAGGCTCTTGAGCAA...TAGCAACTGAAGAACAGGATGTGGCCTCAGAAGCAGGAGAGCTGGGTGGTATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp ACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTCTGCACAATGAGGTATATTaGCAACATATAAAGACTGGA +
Preference number: 4 (lower is better)
Translates to: TQHQLERTALYHPALLLLHNEVY*QHIKTG
Trigger: TCCAGTCTTTATATGTTGCCAATATACCTCATTGTG...CAGAAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR TCA 90 bp AGAAGAAAGCTCAGTGTTTGGTCTTTGAGTCTTAAAGTCACTCATGCAGATGCCGTTCTGAAGTCAGAATaGTGGGCTGGTCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RRKLSVWSLSLKVTHADAVLKSE*WAGLSW
Trigger: CCAAGAGAGACCAGCCCATCATTCTGACTTCAGAAC...GGCATCTGCATGAGTGACTTTAAGACTCAAAGACCAAACACTGAGCTTTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR TCA 90 bp ACCCCTAGAAGAAAGCTCAGTGTTTGGTCTTTGAGTCTTAAAGTCACTCATGCATACACAGCACCAGCTTaGGAGGACAGCCTTATACCA +
Preference number: 4 (lower is better)
Translates to: TPRRKLSVWSLSLKVTHAYTAPA*EDSLIP
Trigger: TGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTA...TGCATGAGTGACTTTAAGACTCAAAGACCAAACACTGAGCTTTCTTCTAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp AGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTGAAGCATCTCACAATGAGGTATATTaGCAACATATAAAGACTGGA +
Preference number: 4 (lower is better)
Translates to: SSVLVMPSWVTRMSSEASHNEVY*QHIKTG
Trigger: TCCAGTCTTTATATGTTGCCAATATACCTCATTGTG...AGATGCTTCAGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCACAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR GCA 90 bp AAAACAGAAACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCATCCTGTTCTTCAGTTaGTATGAAGTAATTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KTETEISSVLVMPSWVTRILFFS*YEVIAS
Trigger: AGAAGCAATTACTTCATAGCAACTGAAGAACAGGAT...GCGCGTTACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGTTTCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp AGAAGAAAGCTCAGTGTTTGGTCTTTGAGTCTTAAAGTCACTCATGCAGATGCCCTTTTAGCTGCAATGTaGGCTGTTCTCCAACCTTCT +
Preference number: 4 (lower is better)
Translates to: RRKLSVWSLSLKVTHADALLAAM*AVLQPS
Trigger: AGAAGGTTGGAGAACAGCCCACATTGCAGCTAAAAG...GGCATCTGCATGAGTGACTTTAAGACTCAAAGACCAAACACTGAGCTTTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp TTACAAGGTCTTAATGCTAAGAAGGTTCTATTACACACAATGAGGTATATTGGCGTGCCTCTCATAGTGTaGTTGTCTCAGCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: LQGLNAKKVLLHTMRYIGVPLIV*LSQHLA
Trigger: TGCCAGGTGCTGAGACAACCACACTATGAGAGGCAC...GCCAATATACCTCATTGTGTGTAATAGAACCTTCTTAGCATTAAGACCTTGTAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR TCA 90 bp ATAAAGCAAAACAGAAACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTGGGTGTTCTTCAGTTGCTATaGAGTAATTGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: IKQNRNRDQLCASHAIVGVLQLL*SNCFFF
Trigger: GAAGAAGAAGCAATTACTTCATAGCAACTGAAGAAC...ACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGTTTCTGTTTTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR TCA 90 bp ACCCCTAGAAGAAAGCTCAGTGTTTGGTCTTTGAGTCTTAAAGTCACTCATGCACATATAAAGACTGGATaGTATCATCCCAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: TPRRKLSVWSLSLKVTHAHIKTG*YHPKRE
Trigger: TTCCCTCTTGGGATGATATCATCCAGTCTTTATATG...TGCATGAGTGACTTTAAGACTCAAAGACCAAACACTGAGCTTTCTTCTAGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CCA 90 bp TTACAAGGTCTTAATGCTAAGAAGGTTCTATTACACACAATGAGGTATATTGGCAACAGCAACAGTGACTaGGGTCACACTGTCACTTCG +
Preference number: 4 (lower is better)
Translates to: LQGLNAKKVLLHTMRYIGNSNSD*GHTVTS
Trigger: CGAAGTGACAGTGTGACCCCAGTCACTGTTGCTGTT...GCCAATATACCTCATTGTGTGTAATAGAACCTTCTTAGCATTAAGACCTTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259205.5
CDS-3UTR GCA 90 bp TTACAAGGTCTTAATGCTAAGAAGGTTCTATTACACACAATGAGGTATATTGGCAGATCCATGATCTTCTaGTCTTTTAGCTGCAATGTG +
Preference number: 4 (lower is better)
Translates to: LQGLNAKKVLLHTMRYIGRSMIF*SFSCNV
Trigger: CACATTGCAGCTAAAAGAGCAGAAGATCATGGATCT...GCCAATATACCTCATTGTGTGTAATAGAACCTTCTTAGCATTAAGACCTTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CAA 90 bp ACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTCTGATGGGCTGGTCTCTCTaGGAGGAGGCAATGAACCAG +
Preference number: 5 (lower is better)
Translates to: TQHQLERTALYHPALLLLMGWSL*EEAMNQ
Trigger: CTGGTTCATTGCCTCCTCCAAGAGAGACCAGCCCAT...CAGAAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CAA 90 bp TCACTCATGCAGATGCCTTGTGGCCTACACAGCACCAGCTTGAGAGGACAGCCTATGATAACAGCAGCCTaGCCCCTGTCTCAGCACCAG +
Preference number: 5 (lower is better)
Translates to: SLMQMPCGLHSTSLRGQPMITAA*PLSQHQ
Trigger: CTGGTGCTGAGACAGGGGCAAGGCTGCTGTTATCAT...AGGCTGTCCTCTCAAGCTGGTGCTGTGTAGGCCACAAGGCATCTGCATGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CAA 90 bp CTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTCACTCATGCAGATGCCTaGTGGCCTACACAGCACCAG +
Preference number: 5 (lower is better)
Translates to: LHSTSLRGQPYTTQLSCFTHADA*WPTQHQ
Trigger: CTGGTGCTGTGTAGGCCACAAGGCATCTGCATGAGT...GAAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CAA 90 bp CTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTCCTACACAGCACCAGCTaGAGAGGACAGCCTTATACC +
Preference number: 5 (lower is better)
Translates to: LHSTSLRGQPYTTQLSCFLHSTS*RGQPYT
Trigger: GGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAG...GAAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS CCA 90 bp CCTGGCAAGAAAGGGTCTTTATCTACAGTCCAGGGGACTGAATCGTaGCTCCAGCAGCTTCCAAGGTCAGTGATGGGTTCTAATGGAGCC +
Preference number: 5 (lower is better)
Translates to: PGKKGSLSTVQGTES*LQQLPRSVMGSNGA
Trigger: GGCTCCATTAGAACCCATCACTGACCTTGGAAGCTGCTGGAGCCACGATTCAGTCCCCTGGACTGTAGATAAAGACCCTTTCTTGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447128.5
CDS-3UTR CAA 90 bp AGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTGAAGCATCTTTTCACGGGCTCGGGTaGGCCATACAGATCCATGAT +
Preference number: 5 (lower is better)
Translates to: SSVLVMPSWVTRMSSEASFHGLG*AIQIHD
Trigger: ATCATGGATCTGTATGGCCAACCCGAGCCCGTGAAA...AGATGCTTCAGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCACAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CAA 90 bp AGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTGAAGCATCTCTACACAGCACCAGCTaGAGAGGACAGCCTTATACC +
Preference number: 5 (lower is better)
Translates to: SSVLVMPSWVTRMSSEASLHSTS*RGQPYT
Trigger: GGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAG...AGATGCTTCAGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCACAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS CCA 90 bp GCAGTGTTGTATGACTTCCCAAGTTCTGAAGTCAGAATGATGGGCTaGTCTCTCTTGGAGGAGGCAATGAACCAGTCCGGGAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: AVLYDFPSSEVRMMG*SLLEEAMNQSGKAT
Trigger: TGTGGCCTTCCCGGACTGGTTCATTGCCTCCTCCAAGAGAGACCAGCCCATCATTCTGACTTCAGAACTTGGGAAGTCATACAACACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CAA 90 bp GTGCTAGTCATGCCATCGTGGGTAACGCGCATGAGCTCTGAAGCATCTTCATACTTTCACGGGCTCGGGTaGGCCATACAGATCCATGAT +
Preference number: 5 (lower is better)
Translates to: VLVMPSWVTRMSSEASSYFHGLG*AIQIHD
Trigger: ATCATGGATCTGTATGGCCAACCCGAGCCCGTGAAA...GTATGAAGATGCTTCAGAGCTCATGCGCGTTACCCACGATGGCATGACTAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CAA 90 bp AAAACAGAAACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCATGATAACAGCAGCCTaGCCCCTGTCTCAGCACCAG +
Preference number: 5 (lower is better)
Translates to: KTETEISSVLVMPSWVTRMITAA*PLSQHQ
Trigger: CTGGTGCTGAGACAGGGGCAAGGCTGCTGTTATCAT...GCGCGTTACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGTTTCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS GCA 90 bp GATAACAGCAACAGTGACTGGGGTCACACTGTCACTTCGTGGAACTaGCACAAGGTTCTGACCCTGAAGGGTCCACACTTGCTGATTCAA +
Preference number: 5 (lower is better)
Translates to: DNSNSDWGHTVTSWN*HKVLTLKGPHLLIQ
Trigger: TTGAATCAGCAAGTGTGGACCCTTCAGGGTCAGAACCTTGTGGCAGTTCCACGAAGTGACAGTGTGACCCCAGTCACTGTTGCTGTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259205.5
CDS-3UTR CAA 90 bp CAGATGCCTTGTGGCCTACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCAGAGCCTCTGGATACTaGCATGTGATAACAGCAACA +
Preference number: 5 (lower is better)
Translates to: QMPCGLHSTSLRGQPYTTRASGY*HVITAT
Trigger: TGTTGCTGTTATCACATGCAAGTATCCAGAGGCTCT...GGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGTAGGCCACAAGGCATCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CAA 90 bp TCACTCATGCAGATGCCTTGTGGCCTACACAGCACCAGCTTGAGAGGACAGCCTAGAGCCTCTGGATACTaGCATGTGATAACAGCAACA +
Preference number: 5 (lower is better)
Translates to: SLMQMPCGLHSTSLRGQPRASGY*HVITAT
Trigger: TGTTGCTGTTATCACATGCAAGTATCCAGAGGCTCT...AGGCTGTCCTCTCAAGCTGGTGCTGTGTAGGCCACAAGGCATCTGCATGAGTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CAA 90 bp TCACTCATGCAGATGCCTTGTGGCCTACACAGCACCAGCTTGAGAGGACAGCCTAATTCAAAGGCAGTGTaGTATGACTTCCCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: SLMQMPCGLHSTSLRGQPNSKAV*YDFPSS
Trigger: AGAACTTGGGAAGTCATACAACACTGCCTTTGAATT...AGGCTGTCCTCTCAAGCTGGTGCTGTGTAGGCCACAAGGCATCTGCATGAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CAA 90 bp ACACAGCACCAGCTTGAGAGGACAGCCTTATACCACCCAGCTCTCCTGCTTCTGAATTCAAAGGCAGTGTaGTATGACTTCCCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: TQHQLERTALYHPALLLLNSKAV*YDFPSS
Trigger: AGAACTTGGGAAGTCATACAACACTGCCTTTGAATT...CAGAAGCAGGAGAGCTGGGTGGTATAAGGCTGTCCTCTCAAGCTGGTGCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CAA 90 bp TCACTCATGCAGATGCCTTGTGGCCTACACAGCACCAGCTTGAGAGGACAGCCTGTAGACGAAAACACATaGGGAACCAGAAACTTTAAG +
Preference number: 5 (lower is better)
Translates to: SLMQMPCGLHSTSLRGQPVDENT*GTRNFK
Trigger: CTTAAAGTTTCTGGTTCCCAATGTGTTTTCGTCTAC...AGGCTGTCCTCTCAAGCTGGTGCTGTGTAGGCCACAAGGCATCTGCATGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CAA 90 bp ACCCCTAGAAGAAAGCTCAGTGTTTGGTCTTTGAGTCTTAAAGTCACTCATGCAACTCATGCAGATGCCTaGTGGCCTACACAGCACCAG +
Preference number: 5 (lower is better)
Translates to: TPRRKLSVWSLSLKVTHATHADA*WPTQHQ
Trigger: CTGGTGCTGTGTAGGCCACAAGGCATCTGCATGAGT...TGCATGAGTGACTTTAAGACTCAAAGACCAAACACTGAGCTTTCTTCTAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS-3UTR CAA 90 bp AAAACAGAAACAGAGATCAGCTCTGTGCTAGTCATGCCATCGTGGGTAACGCGCGTAGACGAAAACACATaGGGAACCAGAAACTTTAAG +
Preference number: 5 (lower is better)
Translates to: KTETEISSVLVMPSWVTRVDENT*GTRNFK
Trigger: CTTAAAGTTTCTGGTTCCCAATGTGTTTTCGTCTAC...GCGCGTTACCCACGATGGCATGACTAGCACAGAGCTGATCTCTGTTTCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS GCA 72 bp AACAGTGACTGGGGTCACACTGTCACTTCGTGGAACTaGCACAAGGTTCTGACCCTGAAGGGTCCACACTTG +
Preference number: 6 (lower is better)
Translates to: NSDWGHTVTSWN*HKVLTLKGPHL
Trigger: CAAGTGTGGACCCTTCAGGGTCAGAACCTTGTGGCAGTTCCACGAAGTGACAGTGTGACCCCAGTCACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259205.5
CDS TCA 72 bp TGGCAAGAAAGGGTCTTTATCTACAGTCCAGGGGACTaGATCGTGGCTCCAGCAGCTTCCAAGGTCAGTGAT +
Preference number: 6 (lower is better)
Translates to: WQERVFIYSPGD*IVAPAASKVSD
Trigger: ATCACTGACCTTGGAAGCTGCTGGAGCCACGATTCAGTCCCCTGGACTGTAGATAAAGACCCTTTCTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000447128.5
CDS CCA 72 bp TATGACTTCCCAAGTTCTGAAGTCAGAATGATGGGCTaGTCTCTCTTGGAGGAGGCAATGAACCAGTCCGGG +
Preference number: 6 (lower is better)
Translates to: YDFPSSEVRMMG*SLLEEAMNQSG
Trigger: CCCGGACTGGTTCATTGCCTCCTCCAAGAGAGACCAGCCCATCATTCTGACTTCAGAACTTGGGAAGTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259205.5
ENST00000376489.6
CDS CCA 72 bp AAAGGGTCTTTATCTACAGTCCAGGGGACTGAATCGTaGCTCCAGCAGCTTCCAAGGTCAGTGATGGGTTCT +
Preference number: 6 (lower is better)
Translates to: KGSLSTVQGTES*LQQLPRSVMGS
Trigger: AGAACCCATCACTGACCTTGGAAGCTGCTGGAGCCACGATTCAGTCCCCTGGACTGTAGATAAAGACCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447128.5
CDS CCA 72 bp CAGCTTCCAAGGTCAGTGATGGGTTCTAATGGAGCCTaGATCATTTATCTGGATGAGCAGAGAAGGAGGCTC +
Preference number: 6 (lower is better)
Translates to: QLPRSVMGSNGA*IIYLDEQRRRL
Trigger: GAGCCTCCTTCTCTGCTCATCCAGATAAATGATCCAGGCTCCATTAGAACCCATCACTGACCTTGGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447128.5