RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL25 (Homo sapiens)

Ensembl gene IDs: ENSG00000166090

Ensembl transcript IDs: ENST00000329715.2, ENST00000397242.2

Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTGCTCCAGACAGCACTTCACAGGGGCCAAGCATCTGGGCATCCTaGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCC +
Preference number: 1 (lower is better)
Translates to: AAPDSTSQGPSIWAS*PFMASGCTPGSRFP
Trigger: GGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTTGGCCCCTGTGAAGTGCTGTCTGGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329715.2
3UTR CCA 90 bp TTCACAGGGGCCAAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTaGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTC +
Preference number: 1 (lower is better)
Translates to: FTGAKHLGILALHGK*LYTWLQVSQKGTSL
Trigger: GAGGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTTGGCCCCTGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329715.2
3UTR TCA 90 bp GGAGTGGTGGCCTCCAGAAATGGGCAGAACTTTGAAAACCTTTCCTaGGAGAAAATGACAGGACACCAGCTTCCGGCGGCCCTAAGCAGC +
Preference number: 1 (lower is better)
Translates to: GVVASRNGQNFENLS*EKMTGHQLPAALSS
Trigger: GCTGCTTAGGGCCGCCGGAAGCTGGTGTCCTGTCATTTTCTCTCAGGAAAGGTTTTCAAAGTTCTGCCCATTTCTGGAGGCCACCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329715.2
3UTR CAA 90 bp ACAGGGGCCAAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTaGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: TGAKHLGILALHGKW*YTWLQVSQKGTSLQ
Trigger: CTGGAGGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTTGGCCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
3UTR-3UTR GCA 90 bp AGGGGCTCTTTCTTCTCCAGCAAGGGGGAAATATCTAGAAAGTGCCTGTGCTGGGCTCTTTTCAAAATGTaGAGAAGTGCAGGCTTTCCC +
Preference number: 2 (lower is better)
Translates to: RGSFFSSKGEISRKCLCWALFKM*RSAGFP
Trigger: GGGAAAGCCTGCACTTCTGCACATTTTGAAAAGAGC...CCAGCACAGGCACTTTCTAGATATTTCCCCCTTGCTGGAGAAGAAAGAGCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329715.2
3UTR-3UTR TCA 90 bp CCTCCTCAGAATCATCCATGTCAAAAGACTAGTAACTACACTAGAATGCACCCAAAATGGGCAGAACTTTaGAAACCTTTCCTGAGAGAA +
Preference number: 2 (lower is better)
Translates to: PPQNHPCQKTSNYTRMHPKWAEL*KPFLRE
Trigger: TTCTCTCAGGAAAGGTTTTCAAAGTTCTGCCCATTT...TGGGTGCATTCTAGTGTAGTTACTAGTCTTTTGACATGGATGATTCTGAGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329715.2
3UTR CCA 72 bp GCTGCTCCAGACAGCACTTCACAGGGGCCAAGCATCTaGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACA +
Preference number: 3 (lower is better)
Translates to: AAPDSTSQGPSI*ASWPFMASGCT
Trigger: TGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTTGGCCCCTGTGAAGTGCTGTCTGGAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329715.2
3UTR CCA 72 bp GCCAAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTaGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGG +
Preference number: 3 (lower is better)
Translates to: AKHLGILALHGK*LYTWLQVSQKG
Trigger: CCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
3UTR GCA 72 bp ACAGGACACCAGCTTCCGGCGGCCCTAAGCAGCAGCTaGTCTTTTCAAAATGTGCAGAAGTGCAGGCTTTCC +
Preference number: 3 (lower is better)
Translates to: TGHQLPAALSSS*SFQNVQKCRLS
Trigger: GGAAAGCCTGCACTTCTGCACATTTTGAAAAGAGCAGCTGCTGCTTAGGGCCGCCGGAAGCTGGTGTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329715.2
3UTR TCA 72 bp GCCTCCAGAAATGGGCAGAACTTTGAAAACCTTTCCTaGGAGAAAATGACAGGACACCAGCTTCCGGCGGCC +
Preference number: 3 (lower is better)
Translates to: ASRNGQNFENLS*EKMTGHQLPAA
Trigger: GGCCGCCGGAAGCTGGTGTCCTGTCATTTTCTCTCAGGAAAGGTTTTCAAAGTTCTGCCCATTTCTGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329715.2
3UTR TCA 72 bp GACAGGAGTGGTGGCCTCCAGAAATGGGCAGAACTTTaGAAACCTTTCCTGAGAGAAAATGACAGGACACCA +
Preference number: 3 (lower is better)
Translates to: DRSGGLQKWAEL*KPFLRENDRTP
Trigger: TGGTGTCCTGTCATTTTCTCTCAGGAAAGGTTTTCAAAGTTCTGCCCATTTCTGGAGGCCACCACTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS-3UTR GCA 90 bp AGCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGAGGTGTCCTGCCCTTTaGTGGGGCAGCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SIWASWPFMASGCTPGSRRCPAL*WGSSWA
Trigger: GGCCCAGCTGCTGCCCCAGCAAAGGGCAGGACACCT...CCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp CTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCCCCAGCCCCAAACCTaGCAGCTTGGCCTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LGILALHGKWLYTWLQVSPQPQT*QLGLPP
Trigger: TGGAGGGAGGCCAAGCTGCCAGGTTTGGGGCTGGGG...GGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS-3UTR CCA 90 bp GGCCAAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTGGCCCTACAGGACTCTaGGTGGCGGTTGGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: GQASGHPGPSWQVVVHLAGPTGL*VAVGPS
Trigger: GCTAGGCCCAACCGCCACCCAGAGTCCTGTAGGGCC...AGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp CAGGGGCCAAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTCACAGGCAACGGGCGTaGTACAGGTCCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: QGPSIWASWPFMASGCTPHRQRA*YRSWGS
Trigger: GCTCCCCCAGGACCTGTACCACGCCCGTTGCCTGTG...AGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTTGGCCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR TCA 90 bp GGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTCCAGCAGGTCCGGCAGCCCTCTGCACTaGCCTGGTACATGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GCTPGSRFPKKGPASSRSGSPLH*PGTCWA
Trigger: TGCCCAGCATGTACCAGGTCAGTGCAGAGGGCTGCC...GGACCTGCTGGAGGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS-3UTR GCA 90 bp TCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCAGAGCAGCTCCGAGTTaGCCCGGGGGTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: SGHPGPSWQVVVHLAPGFRAAPS*PGGPCG
Trigger: CCCACATGGACCCCCGGGGCAACTCGGAGCTGCTCT...GAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR TCA 90 bp GCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTGTCTGTAGGCTaGCGCAGTGCGGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: ALHGKWLYTWLQVSQKGTSLSVG*RSAGTG
Trigger: GCCTGTGCCCGCACTGCGTCAGCCTACAGACAGGCT...GGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR GCA 90 bp ATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTGGTCGCTCCCTCATCTaGACCCTCCCCCTGGGATCC +
Preference number: 4 (lower is better)
Translates to: IWASWPFMASGCTPGSRFGRSLI*TLPLGS
Trigger: GGATCCCAGGGGGAGGGTGCAGATGAGGGAGCGACC...AAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS-3UTR GCA 90 bp CATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTCAGGTGTCCTGCCCTTTaGTGGGGCAGCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HGKWLYTWLQVSQKGTSLRCPAL*WGSSWA
Trigger: GGCCCAGCTGCTGCCCCAGCAAAGGGCAGGACACCT...GAGGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR GCA 90 bp ATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTTGTAGGCTGACGCAGTaGGGGCACAGGCAACGGGCG +
Preference number: 4 (lower is better)
Translates to: IWASWPFMASGCTPGSRFCRLTQ*GHRQRA
Trigger: CGCCCGTTGCCTGTGCCCGCACTGCGTCAGCCTACA...AAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR GCA 90 bp CTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGAGAGCAGCTCCGAGTTaGCCCGGGGGTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: LALHGKWLYTWLQVSQKGRAAPS*PGGPCG
Trigger: CCCACATGGACCCCCGGGGCAACTCGGAGCTGCTCT...CCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp TGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTCCAGGCCCTACAGGACTCTaGGTGGCGGTTGGGCCTAGC +
Preference number: 4 (lower is better)
Translates to: WQVVVHLAPGFPKRDQPPGPTGL*VAVGPS
Trigger: GCTAGGCCCAACCGCCACCCAGAGTCCTGTAGGGCC...TGGAGGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp CTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAGGGGCCAAGCATCTaGGCATCCTGGCCCTTCATG +
Preference number: 4 (lower is better)
Translates to: LGILALHGKWLYTWLQVSQGPSI*ASWPFM
Trigger: CATGAAGGGCCAGGATGCCCAGATGCTTGGCCCCTG...GGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp CACAGGGGCCAAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCAGGGGCCAAGCATCTaGGCATCCTGGCCCTTCATG +
Preference number: 4 (lower is better)
Translates to: HRGQASGHPGPSWQVVVHQGPSI*ASWPFM
Trigger: CATGAAGGGCCAGGATGCCCAGATGCTTGGCCCCTG...GTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTTGGCCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR TCA 90 bp CTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCAGCCTGTCTGTAGGCTaGCGCAGTGCGGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: LHGKWLYTWLQVSQKGTSSLSVG*RSAGTG
Trigger: GCCTGTGCCCGCACTGCGTCAGCCTACAGACAGGCT...GCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR GCA 90 bp TGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGATGTAGGCTGACGCAGTaGGGGCACAGGCAACGGGCG +
Preference number: 4 (lower is better)
Translates to: WPFMASGCTPGSRFPKKGCRLTQ*GHRQRA
Trigger: CGCCCGTTGCCTGTGCCCGCACTGCGTCAGCCTACA...TCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR GCA 90 bp CTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCAGTAGCCCTTGTGGGTaGCCTTCTCGCCATGGCATG +
Preference number: 4 (lower is better)
Translates to: LGILALHGKWLYTWLQVSSSPCG*PSRHGM
Trigger: CATGCCATGGCGAGAAGGGCACCCACAAGGGCTACT...GGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR GCA 90 bp GCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTAAACACGGTACAGCCTaGGCTCCAGGCAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: ASGHPGPSWQVVVHLAPGKHGTA*APGSSP
Trigger: AGGGCTACTGCCTGGAGCGCAGGCTGTACCGTGTTT...ACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp CCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCACACAGGCAACGGGCGTaGTACAGGTCCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PFMASGCTPGSRFPKKGPHRQRA*YRSWGS
Trigger: GCTCCCCCAGGACCTGTACCACGCCCGTTGCCTGTG...TGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp CCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCCCGGGGGTCCATGTaGGAGCCTGTCTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: PSWQVVVHLAPGFPKRDQPRGSM*EPVCRL
Trigger: CAGCCTACAGACAGGCTCCCACATGGACCCCCGGGG...CTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp TTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCCCCCGGGGGTCCATGTaGGAGCCTGTCTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: FMASGCTPGSRFPKKGPAPRGSM*EPVCRL
Trigger: CAGCCTACAGACAGGCTCCCACATGGACCCCCGGGG...GGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp GGGCCAAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCGCCCTTCATGGCAAGTaGTTGTACACCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GPSIWASWPFMASGCTPGALHGK*LYTWLQ
Trigger: CTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGC...GCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR GCA 90 bp GGGGCCAAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGGTACATGCTGGGCACTaGACACTCAGTCACAAGTGG +
Preference number: 4 (lower is better)
Translates to: GAKHLGILALHGKWLYTWVHAGH*TLSHKW
Trigger: CCACTTGTGACTGAGTGTGCAGTGCCCAGCATGTAC...CCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR GCA 90 bp ATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTGAGGCACAGGCACAGTaGTCCACCTCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: IWASWPFMASGCTPGSRFEAQAQ*STSAAP
Trigger: AGGAGCTGCTGAGGTGGAGCACTGTGCCTGTGCCTC...AAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR GCA 90 bp CCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGAGGCACAGGCACAGTaGTCCACCTCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PGPSWQVVVHLAPGFPKREAQAQ*STSAAP
Trigger: AGGAGCTGCTGAGGTGGAGCACTGTGCCTGTGCCTC...CCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR GCA 90 bp AAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGAAACACGGTACAGCCTaGGCTCCAGGCAGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: KHLGILALHGKWLYTWLQKHGTA*APGSSP
Trigger: AGGGCTACTGCCTGGAGCGCAGGCTGTACCGTGTTT...CTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp GGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTCCAGCAGGTCCTGGAAGCAGGCTGACTaGAGCAGGTTAGGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GCTPGSRFPKKGPASSRSWKQAD*SRLGVL
Trigger: CAGGACTCCTAACCTGCTCCAGTCAGCCTGCTTCCA...GGACCTGCTGGAGGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp TCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCTCTGCACCCTCCCCCTaGGATCCCAGTTTCTCACTC +
Preference number: 4 (lower is better)
Translates to: SGHPGPSWQVVVHLAPGFSAPSP*DPSFSL
Trigger: GAGTGAGAAACTGGGATCCCAGGGGGAGGGTGCAGA...GAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS-3UTR CCA 90 bp TCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGCTACAGGACTCTGGGTaGCGGTTGGGCCTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SWPFMASGCTPGSRFPKKLQDSG*RLGLAG
Trigger: GCCTGCTAGGCCCAACCGCCACCCAGAGTCCTGTAG...CTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp CAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTCCAGCAGCGTGGTACAGGTCCTaGGGGAGCCGGTTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: QVVVHLAPGFPKRDQPPAAWYRS*GSRFKS
Trigger: AGACTTGAACCGGCTCCCCCAGGACCTGTACCACGC...TGCTGGAGGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp GTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTCCAGCAGGTCTTCTCGCCATGGCATaGCCGCCGGTAGAAGACAGT +
Preference number: 4 (lower is better)
Translates to: VVVHLAPGFPKRDQPPAGLLAMA*PPVEDS
Trigger: ACTGTCTTCTACCGGCGGCCATGCCATGGCGAGAAG...ACCTGCTGGAGGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp GGGCCAAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCCATCCTGGCCCTTCATaGCAAGTGGTTGTACACCTG +
Preference number: 4 (lower is better)
Translates to: GPSIWASWPFMASGCTPGHPGPS*QVVVHL
Trigger: CAGGTGTACAACCACTTGCCATGAAGGGCCAGGATG...GCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp GGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAGCATCTGGGCATCCTaGCCCTTCATGGCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: GHPGPSWQVVVHLAPGFPSIWAS*PFMASG
Trigger: ACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCT...TGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp GCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTAGCATCTGGGCATCCTaGCCCTTCATGGCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: ASGHPGPSWQVVVHLAPGSIWAS*PFMASG
Trigger: ACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCT...ACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp GCCAAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCAGGAAGAGACAGGAGTaGTGGCCTCCAGAAATGGGC +
Preference number: 4 (lower is better)
Translates to: AKHLGILALHGKWLYTWLRKRQE*WPPEMG
Trigger: GCCCATTTCTGGAGGCCACCACTCCTGTCTCTTCCT...GAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS-3UTR TCA 90 bp GCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCTCACAAGTGGGGCACTaGCTGACAGGCCTCGTGGAA +
Preference number: 4 (lower is better)
Translates to: ALHGKWLYTWLQVSQKGTSQVGH*LTGLVE
Trigger: TTCCACGAGGCCTGTCAGTCAGTGCCCCACTTGTGA...GGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR TCA 90 bp CTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGTCACAAGTGGGGCACTaGCTGACAGGCCTCGTGGAA +
Preference number: 4 (lower is better)
Translates to: LALHGKWLYTWLQVSQKGSQVGH*LTGLVE
Trigger: TTCCACGAGGCCTGTCAGTCAGTGCCCCACTTGTGA...CCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR TCA 90 bp GGGGCCAAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGAGGTGTGGGTTCCCATaGCCATTGCCAAGAATGCAA +
Preference number: 4 (lower is better)
Translates to: GAKHLGILALHGKWLYTWRCGFP*PLPRMQ
Trigger: TTGCATTCTTGGCAATGGTCATGGGAACCCACACCT...CCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR GCA 90 bp GCCAAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCGTACATGCTGGGCACTaGACACTCAGTCACAAGTGG +
Preference number: 4 (lower is better)
Translates to: AKHLGILALHGKWLYTWLVHAGH*TLSHKW
Trigger: CCACTTGTGACTGAGTGTGCAGTGCCCAGCATGTAC...GAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR GCA 90 bp AAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTCCAGCAGAGTAGCCCTTGTGGGTaGCCTTCTCGCCATGGCATG +
Preference number: 4 (lower is better)
Translates to: KWLYTWLQVSQKGTSLQQSSPCG*PSRHGM
Trigger: CATGCCATGGCGAGAAGGGCACCCACAAGGGCTACT...CTGCTGGAGGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR GCA 90 bp CTTTCTTCTCCAGCAAGGGGGAAATATCTAGAAAGTGCCTGTGCTGGGCCAGGGCCTGTCCCGGGATCCTaGTGCTCCAGACAGCACTTC +
Preference number: 4 (lower is better)
Translates to: LSSPARGKYLESACAGPGPVPGS*CSRQHF
Trigger: GAAGTGCTGTCTGGAGCAGCAGGATCCCGGGACAGG...CCCTGGCCCAGCACAGGCACTTTCTAGATATTTCCCCCTTGCTGGAGAAGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS-3UTR CCA 90 bp CATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAGCGTGGTACAGGTCCTaGGGGAGCCGGTTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: HPGPSWQVVVHLAPGFPKAWYRS*GSRFKS
Trigger: AGACTTGAACCGGCTCCCCCAGGACCTGTACCACGC...TTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp ATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCTTCTCGCCATGGCATaGCCGCCGGTAGAAGACAGT +
Preference number: 4 (lower is better)
Translates to: IWASWPFMASGCTPGSRFLLAMA*PPVEDS
Trigger: ACTGTCTTCTACCGGCGGCCATGCCATGGCGAGAAG...AAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp AAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGCCCTTCATGGCAAGTaGTTGTACACCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: KHLGILALHGKWLYTWLQALHGK*LYTWLQ
Trigger: CTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGC...CTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR GCA 90 bp CATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAACCTCAGGCAGCCCTCTaGACTGACCTGGTACATGCT +
Preference number: 4 (lower is better)
Translates to: HPGPSWQVVVHLAPGFPKPQAAL*TDLVHA
Trigger: AGCATGTACCAGGTCAGTGCAGAGGGCTGCCTGAGG...TTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS-3UTR GCA 90 bp GGGCCAAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCGACCATTGCCAAGAATaGAACCACCTGGTACATGCT +
Preference number: 4 (lower is better)
Translates to: GPSIWASWPFMASGCTPGDHCQE*NHLVHA
Trigger: AGCATGTACCAGGTGGTTGCATTCTTGGCAATGGTC...GCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397242.2
CDS-3UTR CCA 90 bp TCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTAGAAAGTGCCTGTGCTaGGCCAGGGTAGCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: SWQVVVHLAPGFPKRDQPRKCLC*ARVAGD
Trigger: ATCCCCTGCTACCCTGGCCCAGCACAGGCACTTTCT...AGGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329715.2
3UTR CAA 72 bp AAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTaGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACC +
Preference number: 4 (lower is better)
Translates to: KHLGILALHGKW*YTWLQVSQKGT
Trigger: GGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR TCA 90 bp GGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAGGTGTGGGTTCCCATaGCCATTGCCAAGAATGCAA +
Preference number: 4 (lower is better)
Translates to: GILALHGKWLYTWLQVSQRCGFP*PLPRMQ
Trigger: TTGCATTCTTGGCAATGGTCATGGGAACCCACACCT...TTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR GCA 90 bp AGGGGCTCTTTCTTCTCCAGCAAGGGGGAAATATCTAGAAAGTGCCTGTGCTGGGTCCCGGGATCCTGCTaGTCCAGACAGCACTTCACA +
Preference number: 4 (lower is better)
Translates to: RGSFFSSKGEISRKCLCWVPGSC*SRQHFT
Trigger: TGTGAAGTGCTGTCTGGAGCAGCAGGATCCCGGGAC...CCAGCACAGGCACTTTCTAGATATTTCCCCCTTGCTGGAGAAGAAAGAGCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS-3UTR GCA 90 bp GGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAGCCCTAAGCAGCAGCTaGTCTTTTCAAAATGTGCAG +
Preference number: 4 (lower is better)
Translates to: GHPGPSWQVVVHLAPGFPALSSS*SFQNVQ
Trigger: CTGCACATTTTGAAAAGAGCAGCTGCTGCTTAGGGC...TGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS-3UTR GCA 90 bp AGGGGCCAAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGAAATATCTAGAAAGTaGCTGTGCTGGGCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: RGQASGHPGPSWQVVVHLEISRK*LCWARV
Trigger: TACCCTGGCCCAGCACAGGCACTTTCTAGATATTTC...CAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTTGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS-3UTR GCA 90 bp CTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCAACCACCTGGTACATaGTGGGCACTGCACACTCAG +
Preference number: 4 (lower is better)
Translates to: LHGKWLYTWLQVSQKGTSQPPGT*WALHTQ
Trigger: CTGAGTGTGCAGTGCCCAGCATGTACCAGGTGGTTG...GCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397242.2
CDS-3UTR CCA 90 bp TCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTTGGAAGCAGGCTGACTaGAGCAGGTTAGGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SWQVVVHLAPGFPKRDQPWKQAD*SRLGVL
Trigger: CAGGACTCCTAACCTGCTCCAGTCAGCCTGCTTCCA...AGGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp AAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTCCAGCAGCATCCTGGCCCTTCATaGCAAGTGGTTGTACACCTG +
Preference number: 4 (lower is better)
Translates to: KWLYTWLQVSQKGTSLQQHPGPS*QVVVHL
Trigger: CAGGTGTACAACCACTTGCCATGAAGGGCCAGGATG...CTGCTGGAGGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR GCA 90 bp CCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGGTTCCCATGACCATTaGCAAGAATGCAACCACCTG +
Preference number: 4 (lower is better)
Translates to: PGPSWQVVVHLAPGFPKRGSHDH*QECNHL
Trigger: CAGGTGGTTGCATTCTTGGCAATGGTCATGGGAACC...CCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp CAGGGGCCAAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTAAGTGGTTGTACACCTaGCTCCAGGTTTCCCAAAAA +
Preference number: 4 (lower is better)
Translates to: QGPSIWASWPFMASGCTPKWLYT*LQVSQK
Trigger: TTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTT...AGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTTGGCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CCA 90 bp GCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGAATGCAACCACCTaGTACATGCTGGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: ASWPFMASGCTPGSRFPKKNATT*YMLGTA
Trigger: TGCAGTGCCCAGCATGTACCAGGTGGTTGCATTCTT...TTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397242.2
CDS-3UTR TCA 90 bp TCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTTTTCCTGAGAGAAAATaGCAGGACACCAGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: SWQVVVHLAPGFPKRDQPFPERK*QDTSFR
Trigger: CCGGAAGCTGGTGTCCTGTCATTTTCTCTCAGGAAA...AGGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS-3UTR GCA 90 bp AAACCTTTCCTGAGAGAAAATGACAGGACACCAGCTTCCGGCGGCCCTAAGCAGCAAAATGTGCAGAAGTaGAGGCTTTCCCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: KPFLRENDRTPASGGPKQQNVQK*RLSPKP
Trigger: GGGCTTTGGGGAAAGCCTGCACTTCTGCACATTTTG...CTGCTTAGGGCCGCCGGAAGCTGGTGTCCTGTCATTTTCTCTCAGGAAAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS-3UTR GCA 90 bp CATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTGCTCTTTTCAAAATGTaGAGAAGTGCAGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: HLGILALHGKWLYTWLQVALFKM*RSAGFP
Trigger: GGGAAAGCCTGCACTTCTGCACATTTTGAAAAGAGC...AACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS-3UTR CCA 90 bp CATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTCAAGTGGTTGTACACCTaGCTCCAGGTTTCCCAAAAA +
Preference number: 4 (lower is better)
Translates to: HGKWLYTWLQVSQKGTSLKWLYT*LQVSQK
Trigger: TTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTT...GAGGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR TCA 90 bp GCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTCCAGCAAATGGGCAGAACTTTaGAAACCTTTCCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: ASGCTPGSRFPKKGPASSKWAEL*KPFLRE
Trigger: TTCTCTCAGGAAAGGTTTTCAAAGTTCTGCCCATTT...GCTGGAGGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS-3UTR TCA 90 bp GGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAGTAGATGCTCACTaGGTGATGAGTAAACAAACA +
Preference number: 4 (lower is better)
Translates to: GHPGPSWQVVVHLAPGFPKVDAH*VMSKQT
Trigger: TGTTTGTTTACTCATCACTCAGTGAGCATCTACTTT...TGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS TCA 90 bp GCTCCGAGTTGCCCCGGGGGTCCATGTGGGAGCCTGTCTGTAGGCTaGCGCAGTGCGGGCACAGGCAACGGGCGTGGTACAGGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: APSCPGGPCGSLSVG*RSAGTGNGRGTGPG
Trigger: CCCAGGACCTGTACCACGCCCGTTGCCTGTGCCCGCACTGCGTCAGCCTACAGACAGGCTCCCACATGGACCCCCGGGGCAACTCGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS GCA 90 bp CACGGGGCCGCACACACACACAAGCTAAGGAAACACGGTACAGCCTaGGCTCCAGGCAGTAGCCCTTGTGGGTGCCCTTCTCGCCATGGC +
Preference number: 5 (lower is better)
Translates to: HGAAHTHKLRKHGTA*APGSSPCGCPSRHG
Trigger: GCCATGGCGAGAAGGGCACCCACAAGGGCTACTGCCTGGAGCGCAGGCTGTACCGTGTTTCCTTAGCTTGTGTGTGTGTGCGGCCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS CCA 90 bp CTGCTGTTGAGGGGTCCATCTTCACTGGCCCTACAGGACTCTGGGTaGCGGTTGGGCCTAGCAGGCTCTAGGGGAGGCACAGGCACAGTG +
Preference number: 5 (lower is better)
Translates to: LLLRGPSSLALQDSG*RLGLAGSRGGTGTV
Trigger: CACTGTGCCTGTGCCTCCCCTAGAGCCTGCTAGGCCCAACCGCCACCCAGAGTCCTGTAGGGCCAGTGAAGATGGACCCCTCAACAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS CCA 90 bp AGGCTGACGCAGTGCGGGCACAGGCAACGGGCGTGGTACAGGTCCTaGGGGAGCCGGTTCAAGTCTCTGTCCAACTCATATCTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: RLTQCGHRQRAWYRS*GSRFKSLSNSYLQG
Trigger: CCCCTGGAGATATGAGTTGGACAGAGACTTGAACCGGCTCCCCCAGGACCTGTACCACGCCCGTTGCCTGTGCCCGCACTGCGTCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS CCA 90 bp GAGCCTGTCTGTAGGCTGACGCAGTGCGGGCACAGGCAACGGGCGTaGTACAGGTCCTGGGGGAGCCGGTTCAAGTCTCTGTCCAACTCA +
Preference number: 5 (lower is better)
Translates to: EPVCRLTQCGHRQRA*YRSWGSRFKSLSNS
Trigger: TGAGTTGGACAGAGACTTGAACCGGCTCCCCCAGGACCTGTACCACGCCCGTTGCCTGTGCCCGCACTGCGTCAGCCTACAGACAGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CAA 90 bp GGGCCAAGCATCTGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCGACTCTGGGTGGCGGTaGGGCCTAGCAGGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: GPSIWASWPFMASGCTPGDSGWR*GLAGSR
Trigger: CCTAGAGCCTGCTAGGCCCAACCGCCACCCAGAGTC...GCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCAGATGCTTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS GCA 90 bp AGGAAACACGGTACAGCCTGCGCTCCAGGCAGTAGCCCTTGTGGGTaGCCTTCTCGCCATGGCATGGCCGCCGGTAGAAGACAGTCTGGT +
Preference number: 5 (lower is better)
Translates to: RKHGTACAPGSSPCG*PSRHGMAAGRRQSG
Trigger: ACCAGACTGTCTTCTACCGGCGGCCATGCCATGGCGAGAAGGGCACCCACAAGGGCTACTGCCTGGAGCGCAGGCTGTACCGTGTTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CAA 90 bp TTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTCCAGCAGGTCCGGGACTCTGGGTGGCGGTaGGGCCTAGCAGGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: LYTWLQVSQKGTSLQQVRDSGWR*GLAGSR
Trigger: CCTAGAGCCTGCTAGGCCCAACCGCCACCCAGAGTC...CCGGACCTGCTGGAGGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS TCA 90 bp AGTCTCTGTCCAACTCATATCTCCAGGGGGAGATGGCCCTGCTGTTaGGGGGTCCATCTTCACTGGCCCTACAGGACTCTGGGTGGCGGT +
Preference number: 5 (lower is better)
Translates to: SLCPTHISRGRWPCC*GVHLHWPYRTLGGG
Trigger: ACCGCCACCCAGAGTCCTGTAGGGCCAGTGAAGATGGACCCCTCAACAGCAGGGCCATCTCCCCCTGGAGATATGAGTTGGACAGAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CAA 90 bp TGGGCATCCTGGCCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCGAGATGGCCCTGCTGTaGAGGGGTCCATCTTCACTG +
Preference number: 5 (lower is better)
Translates to: WASWPFMASGCTPGSRFPEMALL*RGPSSL
Trigger: CAGTGAAGATGGACCCCTCAACAGCAGGGCCATCTC...GGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGGCCAGGATGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS GCA 90 bp CTAATGAGAGAACTGTCCTCACCTAATCTGGGTCGCTCCCTCATCTaGACCCTCCCCCTGGGATCCCAGTTTCTCACTCCACTTGGCCCC +
Preference number: 5 (lower is better)
Translates to: LMRELSSPNLGRSLI*TLPLGSQFLTPLGP
Trigger: GGGGCCAAGTGGAGTGAGAAACTGGGATCCCAGGGGGAGGGTGCAGATGAGGGAGCGACCCAGATTAGGTGAGGACAGTTCTCTCATTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS-3UTR CAA 90 bp AGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTCCAGCAGGGAGATGGCCCTGCTGTaGAGGGGTCCATCTTCACTG +
Preference number: 5 (lower is better)
Translates to: SGCTPGSRFPKKGPASSREMALL*RGPSSL
Trigger: CAGTGAAGATGGACCCCTCAACAGCAGGGCCATCTC...CCTGCTGGAGGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CAA 90 bp CCCTTCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCACTTCATGGCAAGTGGTaGTACACCTGGCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: PFMASGCTPGSRFPKKGPLHGKW*YTWLQV
Trigger: AACCTGGAGCCAGGTGTACAACCACTTGCCATGAAG...TGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS-3UTR CAA 90 bp TCATGGCAAGTGGTTGTACACCTGGCTCCAGGTTTCCCAAAAAGGGACCAGCCTGAAATGGGCAGAACTTaGAAAACCTTTCCTGAGAGA +
Preference number: 5 (lower is better)
Translates to: SWQVVVHLAPGFPKRDQPEMGRT*KTFPER
Trigger: TCTCTCAGGAAAGGTTTTCAAAGTTCTGCCCATTTC...AGGCTGGTCCCTTTTTGGGAAACCTGGAGCCAGGTGTACAACCACTTGCCATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS TCA 72 bp TGCCCCGGGGGTCCATGTGGGAGCCTGTCTGTAGGCTaGCGCAGTGCGGGCACAGGCAACGGGCGTGGTACA +
Preference number: 6 (lower is better)
Translates to: CPGGPCGSLSVG*RSAGTGNGRGT
Trigger: TGTACCACGCCCGTTGCCTGTGCCCGCACTGCGTCAGCCTACAGACAGGCTCCCACATGGACCCCCGGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS GCA 72 bp GGGTCCATGTGGGAGCCTGTCTGTAGGCTGACGCAGTaGGGGCACAGGCAACGGGCGTGGTACAGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: GSMWEPVCRLTQ*GHRQRAWYRSW
Trigger: CCAGGACCTGTACCACGCCCGTTGCCTGTGCCCGCACTGCGTCAGCCTACAGACAGGCTCCCACATGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS CCA 72 bp TGTAGGCTGACGCAGTGCGGGCACAGGCAACGGGCGTaGTACAGGTCCTGGGGGAGCCGGTTCAAGTCTCTG +
Preference number: 6 (lower is better)
Translates to: CRLTQCGHRQRA*YRSWGSRFKSL
Trigger: CAGAGACTTGAACCGGCTCCCCCAGGACCTGTACCACGCCCGTTGCCTGTGCCCGCACTGCGTCAGCCTACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS CCA 72 bp AGGGGTCCATCTTCACTGGCCCTACAGGACTCTGGGTaGCGGTTGGGCCTAGCAGGCTCTAGGGGAGGCACA +
Preference number: 6 (lower is better)
Translates to: RGPSSLALQDSG*RLGLAGSRGGT
Trigger: TGTGCCTCCCCTAGAGCCTGCTAGGCCCAACCGCCACCCAGAGTCCTGTAGGGCCAGTGAAGATGGACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS CAA 72 bp CCATCTTCACTGGCCCTACAGGACTCTGGGTGGCGGTaGGGCCTAGCAGGCTCTAGGGGAGGCACAGGCACA +
Preference number: 6 (lower is better)
Translates to: PSSLALQDSGWR*GLAGSRGGTGT
Trigger: TGTGCCTGTGCCTCCCCTAGAGCCTGCTAGGCCCAACCGCCACCCAGAGTCCTGTAGGGCCAGTGAAGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS CAA 90 bp TTGAGGGGTCCATCTTCACTGGCCCTACAGGACTCTGGGTGGCGGTaGGGCCTAGCAGGCTCTAGGGGAGGCACAGGCACAGTGCTCCAC +
Preference number: 6 (lower is better)
Translates to: LRGPSSLALQDSGWR*GLAGSRGGTGTVLH
Trigger: GTGGAGCACTGTGCCTGTGCCTCCCCTAGAGCCTGCTAGGCCCAACCGCCACCCAGAGTCCTGTAGGGCCAGTGAAGATGGACCCCTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS GCA 72 bp AGAAGACAGTCTGGTTGTGGTAGAGCAGCTCCGAGTTaGCCCGGGGGTCCATGTGGGAGCCTGTCTGTAGGC +
Preference number: 6 (lower is better)
Translates to: RRQSGCGRAAPS*PGGPCGSLSVG
Trigger: GCCTACAGACAGGCTCCCACATGGACCCCCGGGGCAACTCGGAGCTGCTCTACCACAACCAGACTGTCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS CCA 72 bp CAGTGCGGGCACAGGCAACGGGCGTGGTACAGGTCCTaGGGGAGCCGGTTCAAGTCTCTGTCCAACTCATAT +
Preference number: 6 (lower is better)
Translates to: QCGHRQRAWYRS*GSRFKSLSNSY
Trigger: ATATGAGTTGGACAGAGACTTGAACCGGCTCCCCCAGGACCTGTACCACGCCCGTTGCCTGTGCCCGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS CAA 90 bp AAGTCTCTGTCCAACTCATATCTCCAGGGGGAGATGGCCCTGCTGTaGAGGGGTCCATCTTCACTGGCCCTACAGGACTCTGGGTGGCGG +
Preference number: 6 (lower is better)
Translates to: KSLSNSYLQGEMALL*RGPSSLALQDSGWR
Trigger: CCGCCACCCAGAGTCCTGTAGGGCCAGTGAAGATGGACCCCTCAACAGCAGGGCCATCTCCCCCTGGAGATATGAGTTGGACAGAGACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS TCA 72 bp CCAACTCATATCTCCAGGGGGAGATGGCCCTGCTGTTaGGGGGTCCATCTTCACTGGCCCTACAGGACTCTG +
Preference number: 6 (lower is better)
Translates to: PTHISRGRWPCC*GVHLHWPYRTL
Trigger: CAGAGTCCTGTAGGGCCAGTGAAGATGGACCCCTCAACAGCAGGGCCATCTCCCCCTGGAGATATGAGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS GCA 72 bp GAACTGTCCTCACCTAATCTGGGTCGCTCCCTCATCTaGACCCTCCCCCTGGGATCCCAGTTTCTCACTCCA +
Preference number: 6 (lower is better)
Translates to: ELSSPNLGRSLI*TLPLGSQFLTP
Trigger: TGGAGTGAGAAACTGGGATCCCAGGGGGAGGGTGCAGATGAGGGAGCGACCCAGATTAGGTGAGGACAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329715.2
CDS GCA 72 bp GCACACACACACAAGCTAAGGAAACACGGTACAGCCTaGGCTCCAGGCAGTAGCCCTTGTGGGTGCCCTTCT +
Preference number: 6 (lower is better)
Translates to: AHTHKLRKHGTA*APGSSPCGCPS
Trigger: AGAAGGGCACCCACAAGGGCTACTGCCTGGAGCGCAGGCTGTACCGTGTTTCCTTAGCTTGTGTGTGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2
CDS GCA 72 bp GGGCCAGTGGCTGTAGGTGTGGGTTCCCATGACCATTaGCAAGAATGCAACCACCTGGTACATGCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: GPVAVGVGSHDH*QECNHLVHAGH
Trigger: GTGCCCAGCATGTACCAGGTGGTTGCATTCTTGGCAATGGTCATGGGAACCCACACCTACAGCCACTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397242.2
CDS CAA 72 bp TCCAACTCATATCTCCAGGGGGAGATGGCCCTGCTGTaGAGGGGTCCATCTTCACTGGCCCTACAGGACTCT +
Preference number: 6 (lower is better)
Translates to: SNSYLQGEMALL*RGPSSLALQDS
Trigger: AGAGTCCTGTAGGGCCAGTGAAGATGGACCCCTCAACAGCAGGGCCATCTCCCCCTGGAGATATGAGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329715.2
ENST00000397242.2