RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IL11RA (Homo sapiens)

Ensembl gene IDs: ENSG00000137070

Ensembl transcript IDs: ENST00000318041.13, ENST00000441545.7, ENST00000466082.1, ENST00000478308.1, ENST00000478802.2, ENST00000553620.5, ENST00000553969.1, ENST00000555003.5, ENST00000555247.5, ENST00000555579.1, ENST00000555981.5, ENST00000556531.5, ENST00000556792.5, ENST00000557298.5, ENST00000602473.5

Found 606 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGGTATGTCCAGCTGGCTCGCAGGCGTCGGGGGTAACCTGGTACTaGCTCTACCCGCAGGCCCTGGGGTGGGTCAGGGCGCAAGATGCT +
Preference number: 1 (lower is better)
Translates to: RVCPAGSQASGVTWY*LYPQALGWVRAQDA
Trigger: AGCATCTTGCGCCCTGACCCACCCCAGGGCCTGCGGGTAGAGTCAGTACCAGGTTACCCCCGACGCCTGCGAGCCAGCTGGACATACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR CCA 90 bp TGCGCCGGACGGTACTGCAAACGGAACTTGAGCAGGAAGTGGGGCTaGCACGGCCAGGAGGCAGGGTATGTCCAGCTGGCTCGCAGGCGT +
Preference number: 1 (lower is better)
Translates to: CAGRYCKRNLSRKWG*HGQEAGYVQLARRR
Trigger: ACGCCTGCGAGCCAGCTGGACATACCCTGCCTCCTGGCCGTGCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR CCA 90 bp GGATGCTGCGCCGGACGGTACTGCAAACGGAACTTGAGCAGGAAGTaGGGCTGGCACGGCCAGGAGGCAGGGTATGTCCAGCTGGCTCGC +
Preference number: 1 (lower is better)
Translates to: GCCAGRYCKRNLSRK*GWHGQEAGYVQLAR
Trigger: GCGAGCCAGCTGGACATACCCTGCCTCCTGGCCGTGCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCAGCATCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR GCA 90 bp GCGGGCTGGAGGGTAGCCCAGCTGCAGGGTCACTGTGCCCCCAAGTaGACCATCCAGGGTCTGGCAGATGTAGGTGCCCTCATCAGTGCT +
Preference number: 1 (lower is better)
Translates to: AGWRVAQLQGHCAPK*TIQGLADVGALISA
Trigger: AGCACTGATGAGGGCACCTACATCTGCCAGACCCTGGATGGTGCACTTGGGGGCACAGTGACCCTGCAGCTGGGCTACCCTCCAGCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555247.5
3UTR GCA 90 bp AGACAACAGGGCGGGCTGGAGGGTAGCCCAGCTGCAGGGTCACTGTaGCCCCAAGTGCACCATCCAGGGTCTGGCAGATGTAGGTGCCCT +
Preference number: 1 (lower is better)
Translates to: RQQGGLEGSPAAGSL*PQVHHPGSGRCRCP
Trigger: AGGGCACCTACATCTGCCAGACCCTGGATGGTGCACTTGGGGGCACAGTGACCCTGCAGCTGGGCTACCCTCCAGCCCGCCCTGTTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555247.5
3UTR GCA 90 bp TCACTGTGCCCCCAAGTGCACCATCCAGGGTCTGGCAGATGTAGGTaGCCTCATCAGTGCTGTCTGCCTGGGCCAGGACCAGTTCATGCC +
Preference number: 1 (lower is better)
Translates to: SLCPQVHHPGSGRCR*PHQCCLPGPGPVHA
Trigger: GGCATGAACTGGTCCTGGCCCAGGCAGACAGCACTGATGAGGGCACCTACATCTGCCAGACCCTGGATGGTGCACTTGGGGGCACAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555247.5
3UTR TCA 90 bp CCTCTACAGGTTTGGAGCTCCTGGACGCCTGTCCACTGGAATCACTaGGGCCAAGAACCCAGGCTTTGGGGATCCATCCTTCCCACCCCG +
Preference number: 1 (lower is better)
Translates to: PLQVWSSWTPVHWNH*GQEPRLWGSILPTP
Trigger: CGGGGTGGGAAGGATGGATCCCCAAAGCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGACAGGCGTCCAGGAGCTCCAAACCTGTAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
3UTR GCA 90 bp GATCTGGCTGGGACTCCAAGTGCAAGAGAAGTTCTCATAGTCGGCTaGTTGGCAGGAGACAACAGGGCGGGCTGGAGGGTAGCCCAGCTG +
Preference number: 1 (lower is better)
Translates to: DLAGTPSAREVLIVG*LAGDNRAGWRVAQL
Trigger: CAGCTGGGCTACCCTCCAGCCCGCCCTGTTGTCTCCTGCCAAGCAGCCGACTATGAGAACTTCTCTTGCACTTGGAGTCCCAGCCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555247.5
3UTR CCA 90 bp ACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTaGGTCCTCTACAGGTTTGGAGCTCCTGGACGCCTGTCCACTGGA +
Preference number: 1 (lower is better)
Translates to: TPARQNYRWNLPKPS*VLYRFGAPGRLSTG
Trigger: TCCAGTGGACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
3UTR GCA 90 bp CCAAGAGCCAAGGACCCACACACACTCCCCAGGCACCTACATACATaGATGCAGAGAATACATGTTCCCTGCCTCACAGACACATGGTCA +
Preference number: 1 (lower is better)
Translates to: PRAKDPHTLPRHLHT*MQRIHVPCLTDTWS
Trigger: TGACCATGTGTCTGTGAGGCAGGGAACATGTATTCTCTGCATGCATGTATGTAGGTGCCTGGGGAGTGTGTGTGGGTCCTTGGCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR GCA 90 bp CCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTaGCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTGGAC +
Preference number: 1 (lower is better)
Translates to: PGFYPHQQDRIIGGI*RSPPGSSTGLELLD
Trigger: GTCCAGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
3UTR TCA 90 bp TTCCAGAATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTGGAGATaGATGTGGTCTATGGGCATCAGAGCATGTGTGAGGATCAGAGGC +
Preference number: 1 (lower is better)
Translates to: FQNQTGSAGSHEGWR*MWSMGIRACVRIRG
Trigger: GCCTCTGATCCTCACACATGCTCTGATGCCCATAGACCACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
3UTR CCA 90 bp TGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTaGAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCT +
Preference number: 1 (lower is better)
Translates to: CPAWFLSTPARQNYR*NLPKPSWVLYRFGA
Trigger: AGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
3UTR TCA 90 bp TATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATaGAGGGTGGAGATGAATGTGGTCTATGGGCATCAGAGCATGTGT +
Preference number: 1 (lower is better)
Translates to: YGEVVPESDRFSGQS*RVEMNVVYGHQSMC
Trigger: ACACATGCTCTGATGCCCATAGACCACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602473.5
3UTR TCA 90 bp AAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCCAGCTaGGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCC +
Preference number: 1 (lower is better)
Translates to: KYRVSQKWAPNRTSS*DPTIGIYCPAWFLS
Trigger: GGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR GCA 90 bp CTGAGTATAATCTCCAAGAACTTCCTTATTCTCTTTATTCACACCTaGACAACCCCTGCAAGGGGAAAGGCCAAGAGCCAAGGACCCACA +
Preference number: 1 (lower is better)
Translates to: LSIISKNFLILFIHT*TTPARGKAKSQGPT
Trigger: TGTGGGTCCTTGGCTCTTGGCCTTTCCCCTTGCAGGGGTTGTGCAGGTGTGAATAAAGAGAATAAGGAAGTTCTTGGAGATTATACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441545.7
3UTR TCA 90 bp CTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTaGAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCCA +
Preference number: 1 (lower is better)
Translates to: LWGEIRGTSTFQLQI*NTGSHRNGLQTELP
Trigger: TGGAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR GCA 90 bp AACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTaGAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAG +
Preference number: 1 (lower is better)
Translates to: NSNSGVKSEVQAPFS*KFEIQGLTEMGSKQ
Trigger: CTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp AGTGCTCGGAGTTCCCCAGGCCTCCGGGCTCCAGGTGCTCCAGGTGCCAGCATCGAAAGTCCCGGGCACTaGCTCGTACAGCATGGGGCA +
Preference number: 2 (lower is better)
Translates to: SARSSPGLRAPGAPGASIESPGH*LVQHGA
Trigger: TGCCCCATGCTGTACGAGTCAGTGCCCGGGACTTTC...GATGCTGGCACCTGGAGCACCTGGAGCCCGGAGGCCTGGGGAACTCCGAGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp CTCCTGGACGCCTGTCCACTGGAATCACTGAGGCCAAGAACCCAGGCTTTGGGGCAGCCAGAGCCCCAGTaGCAGGGCCCCAGCCACCAG +
Preference number: 2 (lower is better)
Translates to: LLDACPLESLRPRTQALGQPEPQ*QGPSHQ
Trigger: CTGGTGGCTGGGGCCCTGGCACTGGGGCTCTGGCTG...CCCCAAAGCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGACAGGCGTCCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp AGTGCTCGGAGTTCCCCAGGCCTCCGGGCTCCAGGTGCTCCAGGTGCCAGCATCAGGTGCCCTCATCAGTaGTGTCTGCCTGGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: SARSSPGLRAPGAPGASIRCPHQ*CLPGPG
Trigger: TCCTGGCCCAGGCAGACAGCACTGATGAGGGCACCT...GATGCTGGCACCTGGAGCACCTGGAGCCCGGAGGCCTGGGGAACTCCGAGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555247.5
3UTR-3UTR CCA 90 bp CGTGGACCAGGCTGGATGCTGCGCCGGACGGTACTGCAAACGGAACTTGAGCAGCCGCAGGCCCTGGGGTaGGTCAGGGCGCAAGATGCT +
Preference number: 2 (lower is better)
Translates to: RGPGWMLRRTVLQTELEQPQALG*VRAQDA
Trigger: AGCATCTTGCGCCCTGACCCACCCCAGGGCCTGCGG...CTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCAGCATCCAGCCTGGTCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR CAA 90 bp GTGGACCAGGCTGGATGCTGCGCCGGACGGTACTGCAAACGGAACTaGAGCAGGAAGTGGGGCTGGCACGGCCAGGAGGCAGGGTATGTC +
Preference number: 2 (lower is better)
Translates to: VDQAGCCAGRYCKRN*SRKWGWHGQEAGYV
Trigger: GACATACCCTGCCTCCTGGCCGTGCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCAGCATCCAGCCTGGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp AGTGCTCGGAGTTCCCCAGGCCTCCGGGCTCCAGGTGCTCCAGGTGCCAGCATCGGTCCTCTACAGGTTTaGAGCTCCTGGACGCCTGTC +
Preference number: 2 (lower is better)
Translates to: SARSSPGLRAPGAPGASIGPLQV*SSWTPV
Trigger: GACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACC...GATGCTGGCACCTGGAGCACCTGGAGCCCGGAGGCCTGGGGAACTCCGAGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp GTGGACCAGGCTGGATGCTGCGCCGGACGGTACTGCAAACGGAACTTGAGCAGGCAGGGTATGTCCAGCTaGCTCGCAGGCGTCGGGGGT +
Preference number: 2 (lower is better)
Translates to: VDQAGCCAGRYCKRNLSRQGMSS*LAGVGG
Trigger: ACCCCCGACGCCTGCGAGCCAGCTGGACATACCCTG...CCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCAGCATCCAGCCTGGTCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp GCTGGATGCTGCGCCGGACGGTACTGCAAACGGAACTTGAGCAGGAAGTGGGGCCAGGGTATGTCCAGCTaGCTCGCAGGCGTCGGGGGT +
Preference number: 2 (lower is better)
Translates to: AGCCAGRYCKRNLSRKWGQGMSS*LAGVGG
Trigger: ACCCCCGACGCCTGCGAGCCAGCTGGACATACCCTG...GCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCAGCATCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp CCAGCATCTAGAAAGTCCCGGGCACTGACTCGTACAGCATGGGGCAGCCCAGCCGGGGTAACCTGGTACTaGCTCTACCCGCAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: PASRKSRALTRTAWGSPAGVTWY*LYPQAL
Trigger: CAGGGCCTGCGGGTAGAGTCAGTACCAGGTTACCCC...GGCTGGGCTGCCCCATGCTGTACGAGTCAGTGCCCGGGACTTTCTAGATGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp GAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTGGACGCCTGTCCACTGGCAGAACTCAGCCCCGTaGACAACACAGCGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: EALLGPLQVWSSWTPVHWQNSAP*TTQRAA
Trigger: GGCTGCCCGCTGTGTTGTCCACGGGGCTGAGTTCTG...CCAGTGGACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp GTTCCCCAGGCCTCCGGGCTCCAGGTGCTCCAGGTGCCAGCATCTAGAAAGTCCACTGCAAACGGAACTTaGGCAGGAAGTGGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: VPQASGLQVLQVPASRKSTANGT*AGSGAG
Trigger: GCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGT...GGACTTTCTAGATGCTGGCACCTGGAGCACCTGGAGCCCGGAGGCCTGGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp CCAGCATCTAGAAAGTCCCGGGCACTGACTCGTACAGCATGGGGCAGCCCAGCCCACTGTGCCCCCAAGTaGACCATCCAGGGTCTGGCA +
Preference number: 2 (lower is better)
Translates to: PASRKSRALTRTAWGSPAHCAPK*TIQGLA
Trigger: TGCCAGACCCTGGATGGTGCACTTGGGGGCACAGTG...GGCTGGGCTGCCCCATGCTGTACGAGTCAGTGCCCGGGACTTTCTAGATGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555247.5
3UTR-3UTR CCA 90 bp GCTGGATGCTGCGCCGGACGGTACTGCAAACGGAACTTGAGCAGGAAGTGGGGCCCAGGGCCCTGTGGATaGACTCCTCCTCTGGCTATC +
Preference number: 2 (lower is better)
Translates to: AGCCAGRYCKRNLSRKWGPGPCG*TPPLAI
Trigger: GATAGCCAGAGGAGGAGTCCATCCACAGGGCCCTGG...GCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCAGCATCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp CCACCTCTGGCTGCGTGTGTAGCTGGCCCCATGCTGGTATCTCCTTTGGTATGGCTCCTCCAGTCCAGCTaGCTCCACCGTGGACCAGGC +
Preference number: 2 (lower is better)
Translates to: PPLAACVAGPMLVSPLVWLLQSS*LHRGPG
Trigger: GCCTGGTCCACGGTGGAGCCAGCTGGACTGGAGGAG...CCATACCAAAGGAGATACCAGCATGGGGCCAGCTACACACGCAGCCAGAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp AGGTGGAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTGGAGACAACAGGGCGGGCTaGAGGGTAGCCCAGCTGCAG +
Preference number: 2 (lower is better)
Translates to: RWNLPKPSWVLYRFGAPGDNRAG*RVAQLQ
Trigger: CTGCAGCTGGGCTACCCTCCAGCCCGCCCTGTTGTC...TCCAGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555247.5
3UTR CAA 90 bp CTGGCTGGGACTCCAAGTGCAAGAGAAGTTCTCATAGTCGGCTGCTaGGCAGGAGACAACAGGGCGGGCTGGAGGGTAGCCCAGCTGCAG +
Preference number: 2 (lower is better)
Translates to: LAGTPSAREVLIVGC*AGDNRAGWRVAQLQ
Trigger: CTGCAGCTGGGCTACCCTCCAGCCCGCCCTGTTGTCTCCTGCCAAGCAGCCGACTATGAGAACTTCTCTTGCACTTGGAGTCCCAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555247.5
3UTR-3UTR GCA 90 bp TGGGGTGGGTCAGGGCGCAAGATGCTCTGCAAGCTCACATCCAGCAGGCGTGTGGGGCGCAAGATGCTCTaGAAGCTCACATCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: WGGSGRKMLCKLTSSRRVGRKML*KLTSSR
Trigger: CCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCC...CACACGCCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACCCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp CTTTGGTATGGTCCCAGTGCTCGGAGTTCCCCAGGCCTCCGGGCTCCAGGTGCTCAGGTTTGGAGCTCCTaGACGCCTGTCCACTGGAAT +
Preference number: 2 (lower is better)
Translates to: LWYGPSARSSPGLRAPGAQVWSS*TPVHWN
Trigger: ATTCCAGTGGACAGGCGTCCAGGAGCTCCAAACCTG...AGCACCTGGAGCCCGGAGGCCTGGGGAACTCCGAGCACTGGGACCATACCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp TGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTGGACGCCTGTCCACTGCCGAAGCCCTCCTaGGTCCTCTACAGGTTTGGA +
Preference number: 2 (lower is better)
Translates to: CRSPPGSSTGLELLDACPLPKPS*VLYRFG
Trigger: TCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAG...TGGACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp GTGGGTCAGGGCGCAAGATGCTCTGCAAGCTCACATCCAGCAGGCGTGTGCTGGGTCCACTGGAATCACTaGGGCCAAGAACCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: VGQGARCSASSHPAGVCWVHWNH*GQEPRL
Trigger: AAGCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGAC...CCAGCACACGCCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp TGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTGGACGCCTGTCCATCCAGGTGCTCCAGGTaGCAGCATCTAGAAAGTCCC +
Preference number: 2 (lower is better)
Translates to: CRSPPGSSTGLELLDACPSRCSR*QHLESP
Trigger: GGGACTTTCTAGATGCTGGCACCTGGAGCACCTGGA...TGGACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp GCCGGACGGTACTGCAAACGGAACTTGAGCAGGAAGTGGGGCTGGCACGGCCAGTCTGGCAGATGTAGGTaGCCTCATCAGTGCTGTCTG +
Preference number: 2 (lower is better)
Translates to: AGRYCKRNLSRKWGWHGQSGRCR*PHQCCL
Trigger: CAGACAGCACTGATGAGGGCACCTACATCTGCCAGA...CTGGCCGTGCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555247.5
3UTR-3UTR CCA 90 bp TGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTGGACGCCTGTCCACAAGAACCCAGGCTTTaGGGATCCATCCTTCCCACC +
Preference number: 2 (lower is better)
Translates to: CRSPPGSSTGLELLDACPQEPRL*GSILPT
Trigger: GGTGGGAAGGATGGATCCCCAAAGCCTGGGTTCTTG...TGGACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp TGGGGTGGGTCAGGGCGCAAGATGCTCTGCAAGCTCACATCCAGCAGGCGTGTGCAAGAACCCAGGCTTTaGGGATCCATCCTTCCCACC +
Preference number: 2 (lower is better)
Translates to: WGGSGRKMLCKLTSSRRVQEPRL*GSILPT
Trigger: GGTGGGAAGGATGGATCCCCAAAGCCTGGGTTCTTG...CACACGCCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACCCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp CCACCTCTGGCTGCGTGTGTAGCTGGCCCCATGCTGGTATCTCCTTTGGTATGGCTGACTCGTACAGCATaGGGCAGCCCAGCCACAGCA +
Preference number: 2 (lower is better)
Translates to: PPLAACVAGPMLVSPLVWLTRTA*GSPATA
Trigger: TGCTGTGGCTGGGCTGCCCCATGCTGTACGAGTCAG...CCATACCAAAGGAGATACCAGCATGGGGCCAGCTACACACGCAGCCAGAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp CCTGGGGTGGGTCAGGGCGCAAGATGCTCTGCAAGCTCACATCCAGCAGGCGTGACTCCAACTCTGGGGTaGAATCAGAGGTACAAGCAC +
Preference number: 2 (lower is better)
Translates to: PGVGQGARCSASSHPAGVTPTLG*NQRYKH
Trigger: GTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGT...CACGCCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACCCACCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp CCACCTCTGGCTGCGTGTGTAGCTGGCCCCATGCTGGTATCTCCTTTGGTATGGCAGCCACAGCATCTGTaGTCACCTCCTCCAGTCCAG +
Preference number: 2 (lower is better)
Translates to: PPLAACVAGPMLVSPLVWQPQHL*SPPPVQ
Trigger: CTGGACTGGAGGAGGTGATCACAGATGCTGTGGCTG...CCATACCAAAGGAGATACCAGCATGGGGCCAGCTACACACGCAGCCAGAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp CCTGGGGTGGGTCAGGGCGCAAGATGCTCTGCAAGCTCACATCCAGCAGGCGTGCTCTTTATTCACACCTaGACAACCCCTGCAAGGGGA +
Preference number: 2 (lower is better)
Translates to: PGVGQGARCSASSHPAGVLFIHT*TTPARG
Trigger: TCCCCTTGCAGGGGTTGTGCAGGTGTGAATAAAGAG...CACGCCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACCCACCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555247.5
3UTR-3UTR GCA 90 bp TTTGGAGCTCCTGGACGCCTGTCCACTGGAATCACTGAGGCCAAGAACCCAGGCCTCATCAGTGCTGTCTaGCTGGGCCAGGACCAGTTC +
Preference number: 2 (lower is better)
Translates to: FGAPGRLSTGITEAKNPGLISAV*LGQDQF
Trigger: GAACTGGTCCTGGCCCAGGCAGACAGCACTGATGAG...GCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGACAGGCGTCCAGGAGCTCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555247.5
3UTR-3UTR CCA 90 bp CCCAGGAAAGAAAGGATTCCCAAAGACGCCAGCACAGCTACCTGCTCCACAGAGCAGAACTCAGCCCCGTaGACAACACAGCGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: PRKERIPKDASTATCSTEQNSAP*TTQRAA
Trigger: GGCTGCCCGCTGTGTTGTCCACGGGGCTGAGTTCTG...CTCTGTGGAGCAGGTAGCTGTGCTGGCGTCTTTGGGAATCCTTTCTTTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp CCTGGGGTGGGTCAGGGCGCAAGATGCTCTGCAAGCTCACATCCAGCAGGCGTGATTACACACGTTCCTTaGGCAGAACTCCAACTCTGG +
Preference number: 2 (lower is better)
Translates to: PGVGQGARCSASSHPAGVITHVP*AELQLW
Trigger: CCAGAGTTGGAGTTCTGCTCAAGGAACGTGTGTAAT...CACGCCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACCCACCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp CCACCTCTGGCTGCGTGTGTAGCTGGCCCCATGCTGGTATCTCCTTTGGTATGGTCCACAGAGTCCCTGTaGTCAAGTAGCCGAGGGTGT +
Preference number: 2 (lower is better)
Translates to: PPLAACVAGPMLVSPLVWSTESL*SSSRGC
Trigger: ACACCCTCGGCTACTTGATCACAGGGACTCTGTGGA...CCATACCAAAGGAGATACCAGCATGGGGCCAGCTACACACGCAGCCAGAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp GCCTGTCCACTGGAATCACTGAGGCCAAGAACCCAGGCTTTGGGGATCCATCCTTGCGCCGGACGGTACTaGAAACGGAACTTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: ACPLESLRPRTQALGIHPCAGRY*KRNLSR
Trigger: CCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCA...AGGATGGATCCCCAAAGCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp AAAGAAAGGATTCCCAAAGACGCCAGCACAGCTACCTGCTCCACAGAGTCCCTGCCAGCAGGCGTGTGCTaGCACCCAGTGGGTTCACCT +
Preference number: 2 (lower is better)
Translates to: KERIPKDASTATCSTESLPAGVC*HPVGSP
Trigger: AGGTGAACCCACTGGGTGCCAGCACACGCCTGCTGG...CAGGGACTCTGTGGAGCAGGTAGCTGTGCTGGCGTCTTTGGGAATCCTTTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp GTGGACCAGGCTGGATGCTGCGCCGGACGGTACTGCAAACGGAACTTGAGCAGGAACAGAACTTCCAGCTaGGATCCAACCATAGGGATC +
Preference number: 2 (lower is better)
Translates to: VDQAGCCAGRYCKRNLSRNRTSS*DPTIGI
Trigger: GATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTT...CCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCAGCATCCAGCCTGGTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp GGGGGTAACCTGGTACTGACTCTACCCGCAGGCCCTGGGGTGGGTCAGGGCGCACAAGCACCTTTCAGCTaGAAATTTGAAATACAGGGT +
Preference number: 2 (lower is better)
Translates to: GGNLVLTLPAGPGVGQGAQAPFS*KFEIQG
Trigger: ACCCTGTATTTCAAATTTGCAGCTGAAAGGTGCTTG...TGCGCCCTGACCCACCCCAGGGCCTGCGGGTAGAGTCAGTACCAGGTTACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp CTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGGCTCCACCTCTGGCTaGGTGTGTAGCTGGCCCCAT +
Preference number: 2 (lower is better)
Translates to: LSTPARQNYRWNLPKPSWGSTSG*VCSWPH
Trigger: ATGGGGCCAGCTACACACGCAGCCAGAGGTGGAGCC...CCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp TTTGGAGCTCCTGGACGCCTGTCCACTGGAATCACTGAGGCCAAGAACCCAGGCAGGGATCTACTGTCCTaGCTGGTTTCTATCCACACC +
Preference number: 2 (lower is better)
Translates to: FGAPGRLSTGITEAKNPGRDLLS*LVSIHT
Trigger: GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCT...GCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGACAGGCGTCCAGGAGCTCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp GGGTCAGGGCGCAAGATGCTCTGCAAGCTCACATCCAGCAGGCGTGTGCTGGCAAGAATACATGTTCCCTaGCTCACAGACACATGGTCA +
Preference number: 2 (lower is better)
Translates to: GSGRKMLCKLTSSRRVLARIHVP*LTDTWS
Trigger: TGACCATGTGTCTGTGAGGCAGGGAACATGTATTCT...TGCCAGCACACGCCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp CTCTACAGGTTTGGAGCTCCTGGACGCCTGTCCACTGGAATCACTGAGGCCAAGGATGGACTCCTCCTCTaGCTATCAGCTCCTAGGACT +
Preference number: 2 (lower is better)
Translates to: LYRFGAPGRLSTGITEAKDGLLL*LSAPRT
Trigger: AGTCCTAGGAGCTGATAGCCAGAGGAGGAGTCCATC...CTTGGCCTCAGTGATTCCAGTGGACAGGCGTCCAGGAGCTCCAAACCTGTAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp GCCTGTCCACTGGAATCACTGAGGCCAAGAACCCAGGCTTTGGGGATCCATCCTACATTAATCCGGTACTaGCTCCAGAACTCAGCCCCG +
Preference number: 2 (lower is better)
Translates to: ACPLESLRPRTQALGIHPTLIRY*LQNSAP
Trigger: CGGGGCTGAGTTCTGGAGCCAGTACCGGATTAATGT...AGGATGGATCCCCAAAGCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp CTCTACAGGTTTGGAGCTCCTGGACGCCTGTCCACTGGAATCACTGAGGCCAAGAGGGATCTACTGTCCTaGCTGGTTTCTATCCACACC +
Preference number: 2 (lower is better)
Translates to: LYRFGAPGRLSTGITEAKRDLLS*LVSIHT
Trigger: GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCT...CTTGGCCTCAGTGATTCCAGTGGACAGGCGTCCAGGAGCTCCAAACCTGTAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp TCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCAGGTTTGGAGCTCCTaGACGCCTGTCCACTGGAAT +
Preference number: 2 (lower is better)
Translates to: STPARQNYRWNLPKPSWVQVWSS*TPVHWN
Trigger: ATTCCAGTGGACAGGCGTCCAGGAGCTCCAAACCTG...GACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp AGAATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTGGAGATGAATGTGGTCTAGTGAGGATCAGAGGCTaGGGGACCAATGGCAGTCAC +
Preference number: 2 (lower is better)
Translates to: RIRQVQRAVMKGGDECGLVRIRG*GTNGSH
Trigger: GTGACTGCCATTGGTCCCTCAGCCTCTGATCCTCAC...TAGACCACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCTGATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602473.5
3UTR-3UTR CCA 90 bp AGGTTTGGAGCTCCTGGACGCCTGTCCACTGGAATCACTGAGGCCAAGAACCCAAGACAGAATTATAGGTaGAATCTGCCGAAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: RFGAPGRLSTGITEAKNPRQNYR*NLPKPS
Trigger: GGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCT...TGGGTTCTTGGCCTCAGTGATTCCAGTGGACAGGCGTCCAGGAGCTCCAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp TCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGTCTCAGCCTCAGCCTaGGGCATAGAAAGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: SNHRDLLSCLVSIHTSKTVSASA*GIERQL
Trigger: CAGCTGCCTTTCTATGCCCCAGGCTGAGGCTGAGAC...TGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466082.1
3UTR-3UTR CCA 90 bp CCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGCAAGAACCCAGGCTTTaGGGATCCATCCTTCCCACC +
Preference number: 2 (lower is better)
Translates to: PTIGIYCPAWFLSTPARQQEPRL*GSILPT
Trigger: GGTGGGAAGGATGGATCCCCAAAGCCTGGGTTCTTG...CTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp ACGTTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTGGTCCTCTACAGGTTTaGAGCTCCTGGACGCCTGTC +
Preference number: 2 (lower is better)
Translates to: TFLEQNSNSGVKSEVQAPGPLQV*SSWTPV
Trigger: GACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACC...AGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp TCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGCTGCCGAAGCCCTCCTaGGTCCTCTACAGGTTTGGA +
Preference number: 2 (lower is better)
Translates to: SKQNFQLRSNHRDLLSCLLPKPS*VLYRFG
Trigger: TCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAG...CAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp ACCTACATACATGCATGCAGAGAATACATGTTCCCTGCCTCACAGACACATGGTGGGTGGGTAAACCGCTaGTCTGGCTGGGACTCCAAG +
Preference number: 2 (lower is better)
Translates to: TYIHACREYMFPASQTHGGWVNR*SGWDSK
Trigger: CTTGGAGTCCCAGCCAGATCAGCGGTTTACCCACCC...ACCATGTGTCTGTGAGGCAGGGAACATGTATTCTCTGCATGCATGTATGTAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTAGAAAGTCCCGGGCACTaGCTCGTACAGCATGGGGCA +
Preference number: 2 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELESPGH*LVQHGA
Trigger: TGCCCCATGCTGTACGAGTCAGTGCCCGGGACTTTC...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp GGCTCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCATTATAGGTGGAATCTaGCGAAGCCCTCCTGGGTCC +
Preference number: 2 (lower is better)
Translates to: GSKQNFQLRSNHRDLLSCIIGGI*RSPPGS
Trigger: GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAAT...GCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp CCCAGGAAAGAAAGGATTCCCAAAGACGCCAGCACAGCTACCTGCTCCACAGAGAGACAGAATTATAGGTaGAATCTGCCGAAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: PRKERIPKDASTATCSTERQNYR*NLPKPS
Trigger: GGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCT...CTCTGTGGAGCAGGTAGCTGTGCTGGCGTCTTTGGGAATCCTTTCTTTCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp AGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGCAGGTTTGGAGCTCCTaGACGCCTGTCCACTGGAAT +
Preference number: 2 (lower is better)
Translates to: RSNHRDLLSCLVSIHTSKQVWSS*TPVHWN
Trigger: ATTCCAGTGGACAGGCGTCCAGGAGCTCCAAACCTG...CTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp ACGTTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTATTATAGGTGGAATCTaGCGAAGCCCTCCTGGGTCC +
Preference number: 2 (lower is better)
Translates to: TFLEQNSNSGVKSEVQAPIIGGI*RSPPGS
Trigger: GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAAT...AGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp AGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGATTATAGGTGGAATCTaGCGAAGCCCTCCTGGGTCC +
Preference number: 2 (lower is better)
Translates to: RSNHRDLLSCLVSIHTSKIIGGI*RSPPGS
Trigger: GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAAT...CTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp TTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACGATGGACTCCTCCTCTaGCTATCAGCTCCTAGGACT +
Preference number: 2 (lower is better)
Translates to: FQLRSNHRDLLSCLVSIHDGLLL*LSAPRT
Trigger: AGTCCTAGGAGCTGATAGCCAGAGGAGGAGTCCATC...GTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp TCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGACATTAATCCGGTACTaGCTCCAGAACTCAGCCCCG +
Preference number: 2 (lower is better)
Translates to: SKQNFQLRSNHRDLLSCLTLIRY*LQNSAP
Trigger: CGGGGCTGAGTTCTGGAGCCAGTACCGGATTAATGT...CAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp CTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGATTACACACGTTCCTTaGGCAGAACTCCAACTCTGG +
Preference number: 2 (lower is better)
Translates to: LSTPARQNYRWNLPKPSWITHVP*AELQLW
Trigger: CCAGAGTTGGAGTTCTGCTCAAGGAACGTGTGTAAT...CCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp AGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCGGGTGGGTAAACCGCTaGTCTGGCTGGGACTCCAAG +
Preference number: 2 (lower is better)
Translates to: SCKFEIQGLTEMGSKQNFGWVNR*SGWDSK
Trigger: CTTGGAGTCCCAGCCAGATCAGCGGTTTACCCACCC...GAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp TGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCATTATAGGTGGAATCTaGCGAAGCCCTCCTGGGTCC +
Preference number: 2 (lower is better)
Translates to: WFLSTPARQNYRWNLPKPIIGGI*RSPPGS
Trigger: GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAAT...GGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATCCAGGTGCTCCAGGTaGCAGCATCTAGAAAGTCCC +
Preference number: 2 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELSRCSR*QHLESP
Trigger: GGGACTTTCTAGATGCTGGCACCTGGAGCACCTGGA...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp TCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTGAACTGCCGAAGCCCTCCTaGGTCCTCTACAGGTTTGGA +
Preference number: 2 (lower is better)
Translates to: SNSGVKSEVQAPFSCKFELPKPS*VLYRFG
Trigger: TCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAG...TTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp TCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATTATAGGTGGAATCTaGCGAAGCCCTCCTGGGTCC +
Preference number: 2 (lower is better)
Translates to: STVLPGFYPHQQDRIIGGIIGGI*RSPPGS
Trigger: GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAAT...TCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp TTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGGGATCTACTGTCCTaGCTGGTTTCTATCCACACC +
Preference number: 2 (lower is better)
Translates to: FLEQNSNSGVKSEVQAPFRDLLS*LVSIHT
Trigger: GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCT...GAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp TTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACAGACAGAATTATAGGTaGAATCTGCCGAAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: FQLRSNHRDLLSCLVSIHRQNYR*NLPKPS
Trigger: GGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCT...GTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp AGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGATCTACTGTCCTGCCTaGTTTCTATCCACACCAGCA +
Preference number: 2 (lower is better)
Translates to: RSNHRDLLSCLVSIHTSKIYCPA*FLSTPA
Trigger: TGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGAT...CTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp TCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAATCTACTGTCCTGCCTaGTTTCTATCCACACCAGCA +
Preference number: 2 (lower is better)
Translates to: SNHRDLLSCLVSIHTSKTIYCPA*FLSTPA
Trigger: TGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGAT...TGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCGGTAAACCGCTGATCTaGCTGGGACTCCAAGTGCAA +
Preference number: 2 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGIGKPLI*LGLQVQ
Trigger: TTGCACTTGGAGTCCCAGCCAGATCAGCGGTTTACC...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp TTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTAACAGAACTTCCAGCTaGGATCCAACCATAGGGATC +
Preference number: 2 (lower is better)
Translates to: FYPHQQDRIIGGICRSPPNRTSS*DPTIGI
Trigger: GATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTT...AGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp TTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAACAGAACTTCCAGCTaGGATCCAACCATAGGGATC +
Preference number: 2 (lower is better)
Translates to: FLEQNSNSGVKSEVQAPFNRTSS*DPTIGI
Trigger: GATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTT...GAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTAACTCCAACTCTGGGGTaGAATCAGAGGTACAAGCAC +
Preference number: 2 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELTPTLG*NQRYKH
Trigger: GTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGT...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCAGGGATCTACTGTCCTaGCTGGTTTCTATCCACACC +
Preference number: 2 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGIRDLLS*LVSIHT
Trigger: GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCT...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTACTCTTTATTCACACCTaGACAACCCCTGCAAGGGGA +
Preference number: 2 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELLFIHT*TTPARG
Trigger: TCCCCTTGCAGGGGTTGTGCAGGTGTGAATAAAGAG...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
3UTR-3UTR CCA 90 bp TTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTATCTACTGTCCTGCCTaGTTTCTATCCACACCAGCA +
Preference number: 2 (lower is better)
Translates to: FYPHQQDRIIGGICRSPPIYCPA*FLSTPA
Trigger: TGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGAT...AGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp TCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAAACAGAACTTCCAGCTaGGATCCAACCATAGGGATC +
Preference number: 2 (lower is better)
Translates to: STVLPGFYPHQQDRIIGGNRTSS*DPTIGI
Trigger: GATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTT...TCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCAGACAGAATTATAGGTaGAATCTGCCGAAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGIRQNYR*NLPKPS
Trigger: GGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCT...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCATCTACTGTCCTGCCTaGTTTCTATCCACACCAGCA +
Preference number: 2 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGIIYCPA*FLSTPA
Trigger: TGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGAT...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp TTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACCAAGCACCTTTCAGCTaGAAATTTGAAATACAGGGT +
Preference number: 2 (lower is better)
Translates to: FQLRSNHRDLLSCLVSIHQAPFS*KFEIQG
Trigger: ACCCTGTATTTCAAATTTGCAGCTGAAAGGTGCTTG...GTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTAAGAATACATGTTCCCTaGCTCACAGACACATGGTCA +
Preference number: 2 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELRIHVP*LTDTWS
Trigger: TGACCATGTGTCTGTGAGGCAGGGAACATGTATTCT...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR TCA 90 bp TGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTTTCAGCTGCAAATTTaGAATACAGGGTCTCACAGA +
Preference number: 2 (lower is better)
Translates to: WFLSTPARQNYRWNLPKPFQLQI*NTGSHR
Trigger: TCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAAA...GGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CCA 90 bp AGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCAGACAGAATTATAGGTaGAATCTGCCGAAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: SCKFEIQGLTEMGSKQNFRQNYR*NLPKPS
Trigger: GGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCT...GAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR GCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCCAAGCACCTTTCAGCTaGAAATTTGAAATACAGGGT +
Preference number: 2 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGIQAPFS*KFEIQG
Trigger: ACCCTGTATTTCAAATTTGCAGCTGAAAGGTGCTTG...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR TCA 72 bp CCAGCTGGCTCGCAGGCGTCGGGGGTAACCTGGTACTaGCTCTACCCGCAGGCCCTGGGGTGGGTCAGGGCG +
Preference number: 3 (lower is better)
Translates to: PAGSQASGVTWY*LYPQALGWVRA
Trigger: CGCCCTGACCCACCCCAGGGCCTGCGGGTAGAGTCAGTACCAGGTTACCCCCGACGCCTGCGAGCCAGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR GCA 72 bp ACCGTGGACCAGGCTGGATGCTGCGCCGGACGGTACTaGAAACGGAACTTGAGCAGGAAGTGGGGCTGGCAC +
Preference number: 3 (lower is better)
Translates to: TVDQAGCCAGRY*KRNLSRKWGWH
Trigger: GTGCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCAGCATCCAGCCTGGTCCACGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR GCA 72 bp AGGGTAGCCCAGCTGCAGGGTCACTGTGCCCCCAAGTaGACCATCCAGGGTCTGGCAGATGTAGGTGCCCTC +
Preference number: 3 (lower is better)
Translates to: RVAQLQGHCAPK*TIQGLADVGAL
Trigger: GAGGGCACCTACATCTGCCAGACCCTGGATGGTGCACTTGGGGGCACAGTGACCCTGCAGCTGGGCTACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555247.5
3UTR GCA 72 bp CCCCAAGTGCACCATCCAGGGTCTGGCAGATGTAGGTaGCCTCATCAGTGCTGTCTGCCTGGGCCAGGACCA +
Preference number: 3 (lower is better)
Translates to: PQVHHPGSGRCR*PHQCCLPGPGP
Trigger: TGGTCCTGGCCCAGGCAGACAGCACTGATGAGGGCACCTACATCTGCCAGACCCTGGATGGTGCACTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555247.5
3UTR CCA 72 bp CGGTACTGCAAACGGAACTTGAGCAGGAAGTGGGGCTaGCACGGCCAGGAGGCAGGGTATGTCCAGCTGGCT +
Preference number: 3 (lower is better)
Translates to: RYCKRNLSRKWG*HGQEAGYVQLA
Trigger: AGCCAGCTGGACATACCCTGCCTCCTGGCCGTGCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CAA 90 bp AGGTGGAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTGGACTCATAGTCGGCTGCTaGGCAGGAGACAACAGGGCG +
Preference number: 3 (lower is better)
Translates to: RWNLPKPSWVLYRFGAPGLIVGC*AGDNRA
Trigger: CGCCCTGTTGTCTCCTGCCAAGCAGCCGACTATGAG...TCCAGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555247.5
3UTR GCA 72 bp GGGACTCCAAGTGCAAGAGAAGTTCTCATAGTCGGCTaGTTGGCAGGAGACAACAGGGCGGGCTGGAGGGTA +
Preference number: 3 (lower is better)
Translates to: GTPSAREVLIVG*LAGDNRAGWRV
Trigger: TACCCTCCAGCCCGCCCTGTTGTCTCCTGCCAAGCAGCCGACTATGAGAACTTCTCTTGCACTTGGAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555247.5
3UTR CCA 72 bp CCCAGTGGGTTCACCTCAGTCACATTAATCCGGTACTaGCTCCAGAACTCAGCCCCGTGGACAACACAGCGG +
Preference number: 3 (lower is better)
Translates to: PSGFTSVTLIRY*LQNSAPWTTQR
Trigger: CCGCTGTGTTGTCCACGGGGCTGAGTTCTGGAGCCAGTACCGGATTAATGTGACTGAGGTGAACCCACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR TCA 72 bp GTTTGGAGCTCCTGGACGCCTGTCCACTGGAATCACTaGGGCCAAGAACCCAGGCTTTGGGGATCCATCCTT +
Preference number: 3 (lower is better)
Translates to: VWSSWTPVHWNH*GQEPRLWGSIL
Trigger: AAGGATGGATCCCCAAAGCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGACAGGCGTCCAGGAGCTCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CAA 90 bp CAGTCCCAGGAAAGAAAGGATTCCCAAAGACGCCAGCACAGCTACCTGCTCCACTACTGCAAACGGAACTaGAGCAGGAAGTGGGGCTGG +
Preference number: 3 (lower is better)
Translates to: QSQERKDSQRRQHSYLLHYCKRN*SRKWGW
Trigger: CCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTA...GTGGAGCAGGTAGCTGTGCTGGCGTCTTTGGGAATCCTTTCTTTCCTGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR CCA 72 bp AGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTaGGTCCTCTACAGGTTTGGAGCTCCTGGACGCCTG +
Preference number: 3 (lower is better)
Translates to: RQNYRWNLPKPS*VLYRFGAPGRL
Trigger: CAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CAA 90 bp TTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTaGGAGCTCCTGGACGCCTGT +
Preference number: 3 (lower is better)
Translates to: FYPHQQDRIIGGICRSPPGSSTG*ELLDAC
Trigger: ACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCC...AGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CAA 90 bp GTGTGTAGCTGGCCCCATGCTGGTATCTCCTTTGGTATGGTCCCAGTGCTCGGACTTTCAGCTGCAAATTaGAAATACAGGGTCTCACAG +
Preference number: 3 (lower is better)
Translates to: VCSWPHAGISFGMVPVLGLSAAN*KYRVSQ
Trigger: CTGTGAGACCCTGTATTTCAAATTTGCAGCTGAAAG...TCCGAGCACTGGGACCATACCAAAGGAGATACCAGCATGGGGCCAGCTACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR TCA 72 bp GTCTCACAGAAATGGGCTCCAAACAGAACTTCCAGCTaGGATCCAACCATAGGGATCTACTGTCCTGCCTGG +
Preference number: 3 (lower is better)
Translates to: VSQKWAPNRTSS*DPTIGIYCPAW
Trigger: CCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGAGCCCATTTCTGTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR TCA 72 bp GTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATaGAGGGTGGAGATGAATGTGGTCTATGGGCATCAG +
Preference number: 3 (lower is better)
Translates to: VVPESDRFSGQS*RVEMNVVYGHQ
Trigger: CTGATGCCCATAGACCACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
3UTR GCA 72 bp TATCCACACCAGCAAGACAGAATTATAGGTGGAATCTaGCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAG +
Preference number: 3 (lower is better)
Translates to: YPHQQDRIIGGI*RSPPGSSTGLE
Trigger: CTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
3UTR CCA 72 bp TGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTaGAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGG +
Preference number: 3 (lower is better)
Translates to: WFLSTPARQNYR*NLPKPSWVLYR
Trigger: CCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CAA 90 bp CTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGCATTACACACGTTCCTaGAGCAGAACTCCAACTCTG +
Preference number: 3 (lower is better)
Translates to: LSTPARQNYRWNLPKPSWHYTRS*SRTPTL
Trigger: CAGAGTTGGAGTTCTGCTCAAGGAACGTGTGTAATG...CCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CAA 90 bp TCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTGAATACTGCAAACGGAACTaGAGCAGGAAGTGGGGCTGG +
Preference number: 3 (lower is better)
Translates to: SNSGVKSEVQAPFSCKFEYCKRN*SRKWGW
Trigger: CCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTA...TTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CAA 90 bp CCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGCTTTCAGCTGCAAATTaGAAATACAGGGTCTCACAG +
Preference number: 3 (lower is better)
Translates to: PTIGIYCPAWFLSTPARQLSAAN*KYRVSQ
Trigger: CTGTGAGACCCTGTATTTCAAATTTGCAGCTGAAAG...CTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR TCA 72 bp TACACACGTTCCTTGAGCAGAACTCCAACTCTGGGGTaGAATCAGAGGTACAAGCACCTTTCAGCTGCAAAT +
Preference number: 3 (lower is better)
Translates to: YTRSLSRTPTLG*NQRYKHLSAAN
Trigger: ATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAACGTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR GCA 72 bp TTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTaGCTGGTTTCTATCCACACCAGCAAGACAGAATTA +
Preference number: 3 (lower is better)
Translates to: FQLRSNHRDLLS*LVSIHTSKTEL
Trigger: TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR CCA 72 bp TACATGTTCCCTGCCTCACAGACACATGGTCACACATaGACACAGATGTACACATTACACACGTTCCTTGAG +
Preference number: 3 (lower is better)
Translates to: YMFPASQTHGHT*TQMYTLHTFLE
Trigger: CTCAAGGAACGTGTGTAATGTGTACATCTGTGTCCATGTGTGACCATGTGTCTGTGAGGCAGGGAACATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CAA 90 bp TCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTGAACATTACACACGTTCCTaGAGCAGAACTCCAACTCTG +
Preference number: 3 (lower is better)
Translates to: SNSGVKSEVQAPFSCKFEHYTRS*SRTPTL
Trigger: CAGAGTTGGAGTTCTGCTCAAGGAACGTGTGTAATG...TTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR-3UTR CAA 90 bp TCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTGAACTTTCAGCTGCAAATTaGAAATACAGGGTCTCACAG +
Preference number: 3 (lower is better)
Translates to: SNSGVKSEVQAPFSCKFELSAAN*KYRVSQ
Trigger: CTGTGAGACCCTGTATTTCAAATTTGCAGCTGAAAG...TTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
3UTR TCA 72 bp GAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTaGAATACAGGGTCTCACAGAAATGGGCTCCAAACA +
Preference number: 3 (lower is better)
Translates to: EIRGTSTFQLQI*NTGSHRNGLQT
Trigger: TGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GGGGGTAACCTGGTACTGACTCTACCCGCAGGCCCTGGGGTGGGTCAGGGCGCACAGCCAGAGCCCCAGTaGCAGGGCCCCAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: GGNLVLTLPAGPGVGQGAQPEPQ*QGPSHQ
Trigger: CTGGTGGCTGGGGCCCTGGCACTGGGGCTCTGGCTG...TGCGCCCTGACCCACCCCAGGGCCTGCGGGTAGAGTCAGTACCAGGTTACCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GACTCTACCCGCAGGCCCTGGGGTGGGTCAGGGCGCAAGATGCTCTGCAAGCTCACGGACCTGCCTGGCTaGCCATACTGGACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: DSTRRPWGGSGRKMLCKLTDLPG*PYWTPG
Trigger: CCCAGGGGTCCAGTATGGGCAGCCAGGCAGGTCCGT...GAGCTTGCAGAGCATCTTGCGCCCTGACCCACCCCAGGGCCTGCGGGTAGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557298.5
CDS-3UTR GCA 90 bp CTCCACCGTGGACCAGGCTGGATGCTGCGCCGGACGGTACTGCAAACGGAACTTCGGCCACCAGGACCCTaGTCAGCCCTGAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LHRGPGWMLRRTVLQTELRPPGP*SALSSC
Trigger: GCAGCTGCTCAGGGCTGAGCAGGGTCCTGGTGGCCG...AAGTTCCGTTTGCAGTACCGTCCGGCGCAGCATCCAGCCTGGTCCACGGTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GGGGGTAACCTGGTACTGACTCTACCCGCAGGCCCTGGGGTGGGTCAGGGCGCAGACCAGGCTGGATGCTaGGCCGGACGGTACTGCAAA +
Preference number: 4 (lower is better)
Translates to: GGNLVLTLPAGPGVGQGADQAGC*AGRYCK
Trigger: TTTGCAGTACCGTCCGGCGCAGCATCCAGCCTGGTC...TGCGCCCTGACCCACCCCAGGGCCTGCGGGTAGAGTCAGTACCAGGTTACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
3UTR CAA 72 bp GCTGGATGCTGCGCCGGACGGTACTGCAAACGGAACTaGAGCAGGAAGTGGGGCTGGCACGGCCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: AGCCAGRYCKRN*SRKWGWHGQEA
Trigger: TGCCTCCTGGCCGTGCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCAGCATCCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp CGGTACTGGCTCCAGAACTCAGCCCCGTGGACAACACAGCGGGCAGCCCCTAGGGACCCTGCTCAGCCCTaGGCAGCTGCTGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: RYWLQNSAPWTTQRAAPRDPAQP*AAAAHL
Trigger: AAGATGAGCAGCAGCTGCTCAGGGCTGAGCAGGGTC...CCTAGGGGCTGCCCGCTGTGTTGTCCACGGGGCTGAGTTCTGGAGCCAGTACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555247.5
CDS-3UTR GCA 90 bp TGGGGTGGGTCAGGGCGCAAGATGCTCTGCAAGCTCACATCCAGCAGGCGTGTGGTGGACCAGGCTGGATaGTGCGCCGGACGGTACTGC +
Preference number: 4 (lower is better)
Translates to: WGGSGRKMLCKLTSSRRVVDQAG*CAGRYC
Trigger: GCAGTACCGTCCGGCGCAGCATCCAGCCTGGTCCAC...CACACGCCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACCCACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GTGGACCAGGCTGGATGCTGCGCCGGACGGTACTGCAAACGGAACTTGAGCAGGGTGGACCAGGCTGGATaGTGCGCCGGACGGTACTGC +
Preference number: 4 (lower is better)
Translates to: VDQAGCCAGRYCKRNLSRVDQAG*CAGRYC
Trigger: GCAGTACCGTCCGGCGCAGCATCCAGCCTGGTCCAC...CCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCAGCATCCAGCCTGGTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp AATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTGGACGCCTGTCTACCCGCAGGCCCTaGGGTGGGTCAGGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: NLPKPSWVLYRFGAPGRLSTRRP*GGSGRK
Trigger: CTTGCGCCCTGACCCACCCCAGGGCCTGCGGGTAGA...CAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GCCGGACGGTACTGCAAACGGAACTTGAGCAGGAAGTGGGGCTGGCACGGCCAGCACTGTGCCCCCAAGTaGACCATCCAGGGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: AGRYCKRNLSRKWGWHGQHCAPK*TIQGLA
Trigger: TGCCAGACCCTGGATGGTGCACTTGGGGGCACAGTG...CTGGCCGTGCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555247.5
CDS-3UTR GCA 90 bp GCCGGACGGTACTGCAAACGGAACTTGAGCAGGAAGTGGGGCTGGCACGGCCAGCATCCAGCAGGCGTGTaGTGGCACCCAGTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: AGRYCKRNLSRKWGWHGQHPAGV*WHPVGS
Trigger: TGAACCCACTGGGTGCCAGCACACGCCTGCTGGATG...CTGGCCGTGCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TGGGGTGGGTCAGGGCGCAAGATGCTCTGCAAGCTCACATCCAGCAGGCGTGTGCAGAACTCAGCCCCGTaGACAACACAGCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: WGGSGRKMLCKLTSSRRVQNSAP*TTQRAA
Trigger: GGCTGCCCGCTGTGTTGTCCACGGGGCTGAGTTCTG...CACACGCCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACCCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TTGGAGCTCCTGGACGCCTGTCCACTGGAATCACTGAGGCCAAGAACCCAGGCTAGCAGGAAGTGGGGCTaGCACGGCCAGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LELLDACPLESLRPRTQASRKWG*HGQEAG
Trigger: CCCTGCCTCCTGGCCGTGCCAGCCCCACTTCCTGCT...AGCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGACAGGCGTCCAGGAGCTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GCTGGATGCTGCGCCGGACGGTACTGCAAACGGAACTTGAGCAGGAAGTGGGGCAGCCGAGGGTGTGGTTaGAGGGAGGGCCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: AGCCAGRYCKRNLSRKWGSRGCG*REGLGG
Trigger: TCCTCCAAGGCCCTCCCTCCAACCACACCCTCGGCT...GCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCAGCATCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CGGTACTGGCTCCAGAACTCAGCCCCGTGGACAACACAGCGGGCAGCCCCTAGGCTGCCGAAGCCCTCCTaGGTCCTCTACAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: RYWLQNSAPWTTQRAAPRLPKPS*VLYRFG
Trigger: TCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAG...CCTAGGGGCTGCCCGCTGTGTTGTCCACGGGGCTGAGTTCTGGAGCCAGTACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp GCCGGACGGTACTGCAAACGGAACTTGAGCAGGAAGTGGGGCTGGCACGGCCAGACTGCAAACGGAACTTaGGCAGGAAGTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AGRYCKRNLSRKWGWHGQTANGT*AGSGAG
Trigger: GCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGT...CTGGCCGTGCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp CGTGGACCAGGCTGGATGCTGCGCCGGACGGTACTGCAAACGGAACTTGAGCAGGAAAGTCCCGGGCACTaGCTCGTACAGCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: RGPGWMLRRTVLQTELEQESPGH*LVQHGA
Trigger: TGCCCCATGCTGTACGAGTCAGTGCCCGGGACTTTC...CTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCAGCATCCAGCCTGGTCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GTGCACCATCCAGGGTCTGGCAGATGTAGGTGCCCTCATCAGTGCTGTCTGCCTGACAACAGGGCGGGCTaGAGGGTAGCCCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VHHPGSGRCRCPHQCCLPDNRAG*RVAQLQ
Trigger: CTGCAGCTGGGCTACCCTCCAGCCCGCCCTGTTGTC...AGGCAGACAGCACTGATGAGGGCACCTACATCTGCCAGACCCTGGATGGTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555247.5
CDS-3UTR CCA 90 bp AGTGCTCGGAGTTCCCCAGGCCTCCGGGCTCCAGGTGCTCCAGGTGCCAGCATCGATGGACTCCTCCTCTaGCTATCAGCTCCTAGGACT +
Preference number: 4 (lower is better)
Translates to: SARSSPGLRAPGAPGASIDGLLL*LSAPRT
Trigger: AGTCCTAGGAGCTGATAGCCAGAGGAGGAGTCCATC...GATGCTGGCACCTGGAGCACCTGGAGCCCGGAGGCCTGGGGAACTCCGAGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GCCTGTCCACTGGAATCACTGAGGCCAAGAACCCAGGCTTTGGGGATCCATCCTCCGCAGGCCCTGGGGTaGGTCAGGGCGCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: ACPLESLRPRTQALGIHPPQALG*VRAQDA
Trigger: AGCATCTTGCGCCCTGACCCACCCCAGGGCCTGCGG...AGGATGGATCCCCAAAGCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GGGATGGAGGTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCCCGCAGGCCCTGGGGTaGGTCAGGGCGCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: GMEVWGGSSRIRQVQRAVPQALG*VRAQDA
Trigger: AGCATCTTGCGCCCTGACCCACCCCAGGGCCTGCGG...GACTGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATACCTCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp GTGCACCATCCAGGGTCTGGCAGATGTAGGTGCCCTCATCAGTGCTGTCTGCCTCAGGGTATGTCCAGCTaGCTCGCAGGCGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: VHHPGSGRCRCPHQCCLPQGMSS*LAGVGG
Trigger: ACCCCCGACGCCTGCGAGCCAGCTGGACATACCCTG...AGGCAGACAGCACTGATGAGGGCACCTACATCTGCCAGACCCTGGATGGTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555247.5
CDS-3UTR CCA 90 bp TGCACCATCCAGGGTCTGGCAGATGTAGGTGCCCTCATCAGTGCTGTCTGCCTGCTCCTCCAGTCCAGCTaGCTCCACCGTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: CTIQGLADVGALISAVCLLLQSS*LHRGPG
Trigger: GCCTGGTCCACGGTGGAGCCAGCTGGACTGGAGGAG...CAGGCAGACAGCACTGATGAGGGCACCTACATCTGCCAGACCCTGGATGGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555247.5
CDS-3UTR CCA 90 bp GAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTGGACGCCTAGCCGAGGGTGTGGTTaGAGGGAGGGCCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: ESAEALLGPLQVWSSWTPSRGCG*REGLGG
Trigger: TCCTCCAAGGCCCTCCCTCCAACCACACCCTCGGCT...AGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GCCGGACGGTACTGCAAACGGAACTTGAGCAGGAAGTGGGGCTGGCACGGCCAGGGTCCTCTACAGGTTTaGAGCTCCTGGACGCCTGTC +
Preference number: 4 (lower is better)
Translates to: AGRYCKRNLSRKWGWHGQGPLQV*SSWTPV
Trigger: GACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACC...CTGGCCGTGCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp CTCCACCGTGGACCAGGCTGGATGCTGCGCCGGACGGTACTGCAAACGGAACTTTGCTGCTCATCTCGGTaGTCCCAGCAGCAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: LHRGPGWMLRRTVLQTELCCSSR*SQQQSV
Trigger: GACACTCTGCTGCTGGGATCACCGAGATGAGCAGCA...AAGTTCCGTTTGCAGTACCGTCCGGCGCAGCATCCAGCCTGGTCCACGGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557298.5
CDS-3UTR GCA 90 bp CCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCCGGCCACCAGGACCCTaGTCAGCCCTGAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PHQQDRIIGGICRSPPGSRPPGP*SALSSC
Trigger: GCAGCTGCTCAGGGCTGAGCAGGGTCCTGGTGGCCG...GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTGGACGCCTCATCCAGCAGGCGTGTaGTGGCACCCAGTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: ESAEALLGPLQVWSSWTPHPAGV*WHPVGS
Trigger: TGAACCCACTGGGTGCCAGCACACGCCTGCTGGATG...AGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GGGTCAGGGCGCAAGATGCTCTGCAAGCTCACATCCAGCAGGCGTGTGCTGGCAGGGCGCAAGATGCTCTaGAAGCTCACATCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GSGRKMLCKLTSSRRVLAGRKML*KLTSSR
Trigger: CCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCC...TGCCAGCACACGCCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GCCGGACGGTACTGCAAACGGAACTTGAGCAGGAAGTGGGGCTGGCACGGCCAGGGTCAGGGCGCAAGATaGTCTGCAAGCTCACATCCA +
Preference number: 4 (lower is better)
Translates to: AGRYCKRNLSRKWGWHGQGQGAR*SASSHP
Trigger: TGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACC...CTGGCCGTGCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TTTGGAGCTCCTGGACGCCTGTCCACTGGAATCACTGAGGCCAAGAACCCAGGCCCAGCAGGCGTGTGCTaGCACCCAGTGGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: FGAPGRLSTGITEAKNPGPAGVC*HPVGSP
Trigger: AGGTGAACCCACTGGGTGCCAGCACACGCCTGCTGG...GCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGACAGGCGTCCAGGAGCTCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CCCAGGAAAGAAAGGATTCCCAAAGACGCCAGCACAGCTACCTGCTCCACAGAGCCGCAGGCCCTGGGGTaGGTCAGGGCGCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: PRKERIPKDASTATCSTEPQALG*VRAQDA
Trigger: AGCATCTTGCGCCCTGACCCACCCCAGGGCCTGCGG...CTCTGTGGAGCAGGTAGCTGTGCTGGCGTCTTTGGGAATCCTTTCTTTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp GTGTGTAGCTGGCCCCATGCTGGTATCTCCTTTGGTATGGTCCCAGTGCTCGGAGGGGTAACCTGGTACTaGCTCTACCCGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: VCSWPHAGISFGMVPVLGGVTWY*LYPQAL
Trigger: CAGGGCCTGCGGGTAGAGTCAGTACCAGGTTACCCC...TCCGAGCACTGGGACCATACCAAAGGAGATACCAGCATGGGGCCAGCTACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp GTGGACCAGGCTGGATGCTGCGCCGGACGGTACTGCAAACGGAACTTGAGCAGGGTCCACTGGAATCACTaGGGCCAAGAACCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VDQAGCCAGRYCKRNLSRVHWNH*GQEPRL
Trigger: AAGCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGAC...CCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCAGCATCCAGCCTGGTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTGGACGCCTTTGGTATGGTCCCAGTaGTCGGAGTTCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ESAEALLGPLQVWSSWTPLVWSQ*SEFPRP
Trigger: AGGCCTGGGGAACTCCGAGCACTGGGACCATACCAA...AGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TGGGGGATGGAGGTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGGCTCCACCTCTGGCTaGGTGTGTAGCTGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: WGMEVWGGSSRIRQVQRAGSTSG*VCSWPH
Trigger: ATGGGGCCAGCTACACACGCAGCCAGAGGTGGAGCC...TGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATACCTCCATCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp AGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCAGCCAGAGCCCCAGTaGCAGGGCCCCAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: RIIGGICRSPPGSSTGLEQPEPQ*QGPSHQ
Trigger: CTGGTGGCTGGGGCCCTGGCACTGGGGCTCTGGCTG...CTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp ATCCAGGGTCTGGCAGATGTAGGTGCCCTCATCAGTGCTGTCTGCCTGGGCCAGCACCTGCACAACCCCTaGAAGGGGAAAGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: IQGLADVGALISAVCLGQHLHNP*KGKGQE
Trigger: CTCTTGGCCTTTCCCCTTGCAGGGGTTGTGCAGGTG...CTGGCCCAGGCAGACAGCACTGATGAGGGCACCTACATCTGCCAGACCCTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555247.5
CDS-3UTR GCA 90 bp AGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGATCTTCCGCGGCCGCTaGCGCCAGCGCCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: RSNHRDLLSCLVSIHTSKIFRGR*RQRPLP
Trigger: GGGCAGAGGGCGCTGGCGGCAGCGGCCGCGGAAGAT...CTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441545.7
ENST00000555247.5
CDS-3UTR GCA 90 bp CAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCCTCGCCCTCGCCCTCTaGCCCGGCCTCTACTCCCTC +
Preference number: 4 (lower is better)
Translates to: QLRSNHRDLLSCLVSIHTLALAL*PGLYSL
Trigger: GAGGGAGTAGAGGCCGGGGCAGAGGGCGAGGGCGAG...GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555247.5
CDS-3UTR CCA 90 bp CCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCGACAACAGGGCGGGCTaGAGGGTAGCCCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PHQQDRIIGGICRSPPGSDNRAG*RVAQLQ
Trigger: CTGCAGCTGGGCTACCCTCCAGCCCGCCCTGTTGTC...GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR CCA 90 bp GTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTTCTACCCGCAGGCCCTaGGGTGGGTCAGGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: VWGGSSRIRQVQRAVMKGSTRRP*GGSGRK
Trigger: CTTGCGCCCTGACCCACCCCAGGGCCTGCGGGTAGA...ACCCTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp GTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTAGCAGGAAGTGGGGCTaGCACGGCCAGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VWGGSSRIRQVQRAVMKGSRKWG*HGQEAG
Trigger: CCCTGCCTCCTGGCCGTGCCAGCCCCACTTCCTGCT...ACCCTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp CCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCCACCGTGGACCAGGCTaGATGCTGCGCCGGACGGTA +
Preference number: 4 (lower is better)
Translates to: PHQQDRIIGGICRSPPGSHRGPG*MLRRTV
Trigger: TACCGTCCGGCGCAGCATCCAGCCTGGTCCACGGTG...GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTCTCCTCCAGTCCAGCTaGCTCCACCGTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: YRWNLPKPSWVLYRFGAPLLQSS*LHRGPG
Trigger: GCCTGGTCCACGGTGGAGCCAGCTGGACTGGAGGAG...AGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTCCACCTATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTGGACGCCTCTGCCGAAGCCCTCCTaGGTCCTCTACAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: ESAEALLGPLQVWSSWTPLPKPS*VLYRFG
Trigger: TCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAG...AGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp TTGGAGCTCCTGGACGCCTGTCCACTGGAATCACTGAGGCCAAGAACCCAGGCTCAGCCACAGCATCTGTaGTCACCTCCTCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LELLDACPLESLRPRTQAQPQHL*SPPPVQ
Trigger: CTGGACTGGAGGAGGTGATCACAGATGCTGTGGCTG...AGCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGACAGGCGTCCAGGAGCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp GTTCCCCAGGCCTCCGGGCTCCAGGTGCTCCAGGTGCCAGCATCTAGAAAGTCCACTCCAACTCTGGGGTaGAATCAGAGGTACAAGCAC +
Preference number: 4 (lower is better)
Translates to: VPQASGLQVLQVPASRKSTPTLG*NQRYKH
Trigger: GTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGT...GGACTTTCTAGATGCTGGCACCTGGAGCACCTGGAGCCCGGAGGCCTGGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp CGGTACTGGCTCCAGAACTCAGCCCCGTGGACAACACAGCGGGCAGCCCCTAGGATTACACACGTTCCTTaGGCAGAACTCCAACTCTGG +
Preference number: 4 (lower is better)
Translates to: RYWLQNSAPWTTQRAAPRITHVP*AELQLW
Trigger: CCAGAGTTGGAGTTCTGCTCAAGGAACGTGTGTAAT...CCTAGGGGCTGCCCGCTGTGTTGTCCACGGGGCTGAGTTCTGGAGCCAGTACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTGGACGCCTGTCCACTGGGTTCTCATAGTCGGCTaGTTGGCAGGAGACAACAGG +
Preference number: 4 (lower is better)
Translates to: EALLGPLQVWSSWTPVHWVLIVG*LAGDNR
Trigger: CCTGTTGTCTCCTGCCAAGCAGCCGACTATGAGAAC...CCAGTGGACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TGGGGGATGGAGGTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCACATCCAGCAGGCGTGTaGTGGCACCCAGTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: WGMEVWGGSSRIRQVQRAHPAGV*WHPVGS
Trigger: TGAACCCACTGGGTGCCAGCACACGCCTGCTGGATG...TGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATACCTCCATCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp CTCCTGGACGCCTGTCCACTGGAATCACTGAGGCCAAGAACCCAGGCTTTGGGGGGTCAGGGCGCAAGATaGTCTGCAAGCTCACATCCA +
Preference number: 4 (lower is better)
Translates to: LLDACPLESLRPRTQALGGQGAR*SASSHP
Trigger: TGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACC...CCCCAAAGCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGACAGGCGTCCAGGAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGCCAGAGCCCCAGTaGCAGGGCCCCAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: DPTIGIYCPAWFLSTPARQPEPQ*QGPSHQ
Trigger: CTGGTGGCTGGGGCCCTGGCACTGGGGCTCTGGCTG...TCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCATCTTCCGCGGCCGCTaGCGCCAGCGCCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: FLEQNSNSGVKSEVQAPFIFRGR*RQRPLP
Trigger: GGGCAGAGGGCGCTGGCGGCAGCGGCCGCGGAAGAT...GAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441545.7
ENST00000555247.5
CDS-3UTR GCA 90 bp GACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGCAGTCAGAGCCCCAGTaGCAGGGCCCCAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: DRIIGGICRSPPGSSTGLQSEPQ*QGPSHQ
Trigger: CTGGTGGCTGGGGCCCTGGCACTGGGGCTCTGACTG...CAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466082.1
CDS-3UTR CCA 90 bp GCTGGATGCTGCGCCGGACGGTACTGCAAACGGAACTTGAGCAGGAAGTGGGGCGGTAAACCGCTGATCTaGCTGGGACTCCAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: AGCCAGRYCKRNLSRKWGGKPLI*LGLQVQ
Trigger: TTGCACTTGGAGTCCCAGCCAGATCAGCGGTTTACC...GCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCAGCATCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGCCGCAGGCCCTGGGGTaGGTCAGGGCGCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: PTIGIYCPAWFLSTPARQPQALG*VRAQDA
Trigger: AGCATCTTGCGCCCTGACCCACCCCAGGGCCTGCGG...CTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCTCTACCCGCAGGCCCTaGGGTGGGTCAGGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: QLRSNHRDLLSCLVSIHTSTRRP*GGSGRK
Trigger: CTTGCGCCCTGACCCACCCCAGGGCCTGCGGGTAGA...GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GAGGTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATGAAGCAGGGTATGTCCAGCTaGCTCGCAGGCGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: EVWGGSSRIRQVQRAVMKQGMSS*LAGVGG
Trigger: ACCCCCGACGCCTGCGAGCCAGCTGGACATACCCTG...CTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp GGCTCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCAGCAGGAAGTGGGGCTaGCACGGCCAGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSKQNFQLRSNHRDLLSCSRKWG*HGQEAG
Trigger: CCCTGCCTCCTGGCCGTGCCAGCCCCACTTCCTGCT...GCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp AGACAGGTTCAGCGGGCAGTCATGAAGGGTGGAGATGAATGTGGTCTATGGGCACACCGTGGACCAGGCTaGATGCTGCGCCGGACGGTA +
Preference number: 4 (lower is better)
Translates to: RQVQRAVMKGGDECGLWAHRGPG*MLRRTV
Trigger: TACCGTCCGGCGCAGCATCCAGCCTGGTCCACGGTG...TGCCCATAGACCACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp AGACAGGTTCAGCGGGCAGTCATGAAGGGTGGAGATGAATGTGGTCTATGGGCACTCCTCCAGTCCAGCTaGCTCCACCGTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: RQVQRAVMKGGDECGLWALLQSS*LHRGPG
Trigger: GCCTGGTCCACGGTGGAGCCAGCTGGACTGGAGGAG...TGCCCATAGACCACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp GCCTGTCCACTGGAATCACTGAGGCCAAGAACCCAGGCTTTGGGGATCCATCCTCTGACTCGTACAGCATaGGGCAGCCCAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: ACPLESLRPRTQALGIHPLTRTA*GSPATA
Trigger: TGCTGTGGCTGGGCTGCCCCATGCTGTACGAGTCAG...AGGATGGATCCCCAAAGCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GTGGGTCAGGGCGCAAGATGCTCTGCAAGCTCACATCCAGCAGGCGTGTGCTGGTGCTGGTATCTCCTTTaGTATGGTCCCAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: VGQGARCSASSHPAGVCWCWYLL*YGPSAR
Trigger: CCGAGCACTGGGACCATACCAAAGGAGATACCAGCA...CCAGCACACGCCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TGCACCATCCAGGGTCTGGCAGATGTAGGTGCCCTCATCAGTGCTGTCTGCCTGGGTCCTCTACAGGTTTaGAGCTCCTGGACGCCTGTC +
Preference number: 4 (lower is better)
Translates to: CTIQGLADVGALISAVCLGPLQV*SSWTPV
Trigger: GACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACC...CAGGCAGACAGCACTGATGAGGGCACCTACATCTGCCAGACCCTGGATGGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555247.5
CDS-3UTR TCA 90 bp CCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCGGGTGGGTAAACCGCTaGTCTGGCTGGGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: PHQQDRIIGGICRSPPGSGWVNR*SGWDSK
Trigger: CTTGGAGTCCCAGCCAGATCAGCGGTTTACCCACCC...GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp CTCTACAGGTTTGGAGCTCCTGGACGCCTGTCCACTGGAATCACTGAGGCCAAGACTGCAAACGGAACTTaGGCAGGAAGTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LYRFGAPGRLSTGITEAKTANGT*AGSGAG
Trigger: GCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGT...CTTGGCCTCAGTGATTCCAGTGGACAGGCGTCCAGGAGCTCCAAACCTGTAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp CAGTCCCAGGAAAGAAAGGATTCCCAAAGACGCCAGCACAGCTACCTGCTCCACGAAAGTCCCGGGCACTaGCTCGTACAGCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: QSQERKDSQRRQHSYLLHESPGH*LVQHGA
Trigger: TGCCCCATGCTGTACGAGTCAGTGCCCGGGACTTTC...GTGGAGCAGGTAGCTGTGCTGGCGTCTTTGGGAATCCTTTCTTTCCTGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp ATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTGGAGATGAATGTGGTCTATGGACGGACCTGCCTGGCTaGCCATACTGGACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: IRQVQRAVMKGGDECGLWTDLPG*PYWTPG
Trigger: CCCAGGGGTCCAGTATGGGCAGCCAGGCAGGTCCGT...CCATAGACCACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp CCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCAGGTGCCCTCATCAGTaGTGTCTGCCTGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PHQQDRIIGGICRSPPGSRCPHQ*CLPGPG
Trigger: TCCTGGCCCAGGCAGACAGCACTGATGAGGGCACCT...GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp TATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTAGGTGCCCTCATCAGTaGTGTCTGCCTGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: YRWNLPKPSWVLYRFGAPRCPHQ*CLPGPG
Trigger: TCCTGGCCCAGGCAGACAGCACTGATGAGGGCACCT...AGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTCCACCTATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555247.5
CDS-3UTR GCA 90 bp CCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCCATCCAGCAGGCGTGTaGTGGCACCCAGTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: PHQQDRIIGGICRSPPGSHPAGV*WHPVGS
Trigger: TGAACCCACTGGGTGCCAGCACACGCCTGCTGGATG...GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp CCCAGGAAAGAAAGGATTCCCAAAGACGCCAGCACAGCTACCTGCTCCACAGAGGACCAGGCTGGATGCTaGGCCGGACGGTACTGCAAA +
Preference number: 4 (lower is better)
Translates to: PRKERIPKDASTATCSTEDQAGC*AGRYCK
Trigger: TTTGCAGTACCGTCCGGCGCAGCATCCAGCCTGGTC...CTCTGTGGAGCAGGTAGCTGTGCTGGCGTCTTTGGGAATCCTTTCTTTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GAGGTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATGAAGCCTCCGGGCTCCAGGTaGTCCAGGTGCCAGCATCTA +
Preference number: 4 (lower is better)
Translates to: EVWGGSSRIRQVQRAVMKPPGSR*SRCQHL
Trigger: TAGATGCTGGCACCTGGAGCACCTGGAGCCCGGAGG...CTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp AGGAAAGAAAGGATTCCCAAAGACGCCAGCACAGCTACCTGCTCCACAGAGTCCGGCTCCACCTCTGGCTaGGTGTGTAGCTGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: RKERIPKDASTATCSTESGSTSG*VCSWPH
Trigger: ATGGGGCCAGCTACACACGCAGCCAGAGGTGGAGCC...GGACTCTGTGGAGCAGGTAGCTGTGCTGGCGTCTTTGGGAATCCTTTCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCAGCCAGAGCCCCAGTaGCAGGGCCCCAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: AWFLSTPARQNYRWNLPKQPEPQ*QGPSHQ
Trigger: CTGGTGGCTGGGGCCCTGGCACTGGGGCTCTGGCTG...CTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GGCTCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCGCCCTGAGCAGCTGCTaGTCATCTTCCGCGGCCGCT +
Preference number: 4 (lower is better)
Translates to: GSKQNFQLRSNHRDLLSCALSSC*SSSAAA
Trigger: AGCGGCCGCGGAAGATGAGCAGCAGCTGCTCAGGGC...GCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441545.7
ENST00000555247.5
CDS-3UTR CCA 90 bp GTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTCTTCACGGACCTGCCTaGCTGCCCATACTGGACCCC +
Preference number: 4 (lower is better)
Translates to: VWGGSSRIRQVQRAVMKGLHGPA*LPILDP
Trigger: GGGGTCCAGTATGGGCAGCCAGGCAGGTCCGTGAAG...ACCCTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp GTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTCAGAACTCAGCCCCGTaGACAACACAGCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VWGGSSRIRQVQRAVMKGQNSAP*TTQRAA
Trigger: GGCTGCCCGCTGTGTTGTCCACGGGGCTGAGTTCTG...ACCCTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp TCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAAGCAGGAAGTGGGGCTaGCACGGCCAGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SNHRDLLSCLVSIHTSKTSRKWG*HGQEAG
Trigger: CCCTGCCTCCTGGCCGTGCCAGCCCCACTTCCTGCT...TGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGAGCAGGAAGTGGGGCTaGCACGGCCAGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SKQNFQLRSNHRDLLSCLSRKWG*HGQEAG
Trigger: CCCTGCCTCCTGGCCGTGCCAGCCCCACTTCCTGCT...CAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GGCTCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCACCGTGGACCAGGCTaGATGCTGCGCCGGACGGTA +
Preference number: 4 (lower is better)
Translates to: GSKQNFQLRSNHRDLLSCHRGPG*MLRRTV
Trigger: TACCGTCCGGCGCAGCATCCAGCCTGGTCCACGGTG...GCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGCACCGTGGACCAGGCTaGATGCTGCGCCGGACGGTA +
Preference number: 4 (lower is better)
Translates to: PTIGIYCPAWFLSTPARQHRGPG*MLRRTV
Trigger: TACCGTCCGGCGCAGCATCCAGCCTGGTCCACGGTG...CTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCAGCCGAGGGTGTGGTTaGAGGGAGGGCCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: STPARQNYRWNLPKPSWVSRGCG*REGLGG
Trigger: TCCTCCAAGGCCCTCCCTCCAACCACACCCTCGGCT...GACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp AGGTTTGGAGCTCCTGGACGCCTGTCCACTGGAATCACTGAGGCCAAGAACCCAGGTCCTCTACAGGTTTaGAGCTCCTGGACGCCTGTC +
Preference number: 4 (lower is better)
Translates to: RFGAPGRLSTGITEAKNPGPLQV*SSWTPV
Trigger: GACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACC...TGGGTTCTTGGCCTCAGTGATTCCAGTGGACAGGCGTCCAGGAGCTCCAAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GGCTCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCGACAACAGGGCGGGCTaGAGGGTCCGGCAGTCACTC +
Preference number: 4 (lower is better)
Translates to: GSKQNFQLRSNHRDLLSCDNRAG*RVRQSL
Trigger: GAGTGACTGCCGGACCCTCCAGCCCGCCCTGTTGTC...GCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557298.5
CDS-3UTR TCA 90 bp TCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCGGGTGGGTAAACCGCTaGTCTGGCTGGGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: STPARQNYRWNLPKPSWVGWVNR*SGWDSK
Trigger: CTTGGAGTCCCAGCCAGATCAGCGGTTTACCCACCC...GACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCGGCCACCAGGACCCTaGTCAGCCCTGAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AWFLSTPARQNYRWNLPKRPPGP*SALSSC
Trigger: GCAGCTGCTCAGGGCTGAGCAGGGTCCTGGTGGCCG...CTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp ACGTTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTACGGACCTGCCTGGCTaGCCATACTGGACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TFLEQNSNSGVKSEVQAPTDLPG*PYWTPG
Trigger: CCCAGGGGTCCAGTATGGGCAGCCAGGCAGGTCCGT...AGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GTTCACCTCAGTCACATTAATCCGGTACTGGCTCCAGAACTCAGCCCCGTGGACCTCATCAGTGCTGTCTaGCTGGGCCAGGACCAGTTC +
Preference number: 4 (lower is better)
Translates to: VHLSHINPVLAPELSPVDLISAV*LGQDQF
Trigger: GAACTGGTCCTGGCCCAGGCAGACAGCACTGATGAG...GTCCACGGGGCTGAGTTCTGGAGCCAGTACCGGATTAATGTGACTGAGGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555247.5
CDS-3UTR GCA 90 bp GAGGTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATGAAGAGGTGCCCTCATCAGTaGTGTCTGCCTGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: EVWGGSSRIRQVQRAVMKRCPHQ*CLPGPG
Trigger: TCCTGGCCCAGGCAGACAGCACTGATGAGGGCACCT...CTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp CCACCTCTGGCTGCGTGTGTAGCTGGCCCCATGCTGGTATCTCCTTTGGTATGGTCTGGCAGATGTAGGTaGCCTCATCAGTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PPLAACVAGPMLVSPLVWSGRCR*PHQCCL
Trigger: CAGACAGCACTGATGAGGGCACCTACATCTGCCAGA...CCATACCAAAGGAGATACCAGCATGGGGCCAGCTACACACGCAGCCAGAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555247.5
CDS-3UTR GCA 90 bp GAGGTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATGAAGCACTGTGCCCCCAAGTaGACCATCCAGGGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: EVWGGSSRIRQVQRAVMKHCAPK*TIQGLA
Trigger: TGCCAGACCCTGGATGGTGCACTTGGGGGCACAGTG...CTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp GAGGTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATGAAGGACCAGGCTGGATGCTaGGCCGGACGGTACTGCAAA +
Preference number: 4 (lower is better)
Translates to: EVWGGSSRIRQVQRAVMKDQAGC*AGRYCK
Trigger: TTTGCAGTACCGTCCGGCGCAGCATCCAGCCTGGTC...CTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp TTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACGTGGACCAGGCTGGATaGTGCGCCGGACGGTACTGC +
Preference number: 4 (lower is better)
Translates to: FQLRSNHRDLLSCLVSIHVDQAG*CAGRYC
Trigger: GCAGTACCGTCCGGCGCAGCATCCAGCCTGGTCCAC...GTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp CCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGGTGGACCAGGCTGGATaGTGCGCCGGACGGTACTGC +
Preference number: 4 (lower is better)
Translates to: PAWFLSTPARQNYRWNLPVDQAG*CAGRYC
Trigger: GCAGTACCGTCCGGCGCAGCATCCAGCCTGGTCCAC...CGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTTTGGTATGGTCCCAGTaGTCGGAGTTCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: YRWNLPKPSWVLYRFGAPLVWSQ*SEFPRP
Trigger: AGGCCTGGGGAACTCCGAGCACTGGGACCATACCAA...AGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTCCACCTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTACAGCCAGAGCCCCAGTaGCAGGGCCCCAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELQPEPQ*QGPSHQ
Trigger: CTGGTGGCTGGGGCCCTGGCACTGGGGCTCTGGCTG...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp ATCCAGGGTCTGGCAGATGTAGGTGCCCTCATCAGTGCTGTCTGCCTGGGCCAGCTCTTTATTCACACCTaGACAACCCCTGCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: IQGLADVGALISAVCLGQLFIHT*TTPARG
Trigger: TCCCCTTGCAGGGGTTGTGCAGGTGTGAATAAAGAG...CTGGCCCAGGCAGACAGCACTGATGAGGGCACCTACATCTGCCAGACCCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555247.5
CDS-3UTR GCA 90 bp AGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTGGAGATGAATGTTTACCAGAGCCCCAGTaGCAGGGCCCCAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: SSRIRQVQRAVMKGGDECLPEPQ*QGPSHQ
Trigger: CTGGTGGCTGGGGCCCTGGCACTGGGGCTCTGGTAA...ACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp CCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGCTTCACGGACCTGCCTaGCTGCCCATACTGGACCCC +
Preference number: 4 (lower is better)
Translates to: PTIGIYCPAWFLSTPARQLHGPA*LPILDP
Trigger: GGGGTCCAGTATGGGCAGCCAGGCAGGTCCGTGAAG...CTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGCTTCACGGACCTGCCTaGCTGCCCATACTGGACCCC +
Preference number: 4 (lower is better)
Translates to: DRIIGGICRSPPGSSTGLLHGPA*LPILDP
Trigger: GGGGTCCAGTATGGGCAGCCAGGCAGGTCCGTGAAG...CAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557298.5
CDS-3UTR CCA 90 bp GGCTCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCCAGCAGGCGTGTGCTaGCACCCAGTGGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: GSKQNFQLRSNHRDLLSCPAGVC*HPVGSP
Trigger: AGGTGAACCCACTGGGTGCCAGCACACGCCTGCTGG...GCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCCCGCAGGCCCTGGGGTaGGTCAGGGCGCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: WFLSTPARQNYRWNLPKPPQALG*VRAQDA
Trigger: AGCATCTTGCGCCCTGACCCACCCCAGGGCCTGCGG...GGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCTACCCGCAGGCCCTaGGGTGGGTCAGGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: WFLSTPARQNYRWNLPKPSTRRP*GGSGRK
Trigger: CTTGCGCCCTGACCCACCCCAGGGCCTGCGGGTAGA...GGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp AACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCTCTACCCGCAGGCCCTaGGGTGGGTCAGGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: NFQLRSNHRDLLSCLVSISTRRP*GGSGRK
Trigger: CTTGCGCCCTGACCCACCCCAGGGCCTGCGGGTAGA...GATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp ACGTTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTCAGGGTATGTCCAGCTaGCTCGCAGGCGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: TFLEQNSNSGVKSEVQAPQGMSS*LAGVGG
Trigger: ACCCCCGACGCCTGCGAGCCAGCTGGACATACCCTG...AGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACACCGTGGACCAGGCTaGATGCTGCGCCGGACGGTA +
Preference number: 4 (lower is better)
Translates to: DPTIGIYCPAWFLSTPARHRGPG*MLRRTV
Trigger: TACCGTCCGGCGCAGCATCCAGCCTGGTCCACGGTG...TCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACACTCCTCCAGTCCAGCTaGCTCCACCGTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: SNHRDLLSCLVSIHTSKTLLQSS*LHRGPG
Trigger: GCCTGGTCCACGGTGGAGCCAGCTGGACTGGAGGAG...TGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp AGACAGGTTCAGCGGGCAGTCATGAAGGGTGGAGATGAATGTGGTCTATGGGCACTGACTCGTACAGCATaGGGCAGCCCAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: RQVQRAVMKGGDECGLWALTRTA*GSPATA
Trigger: TGCTGTGGCTGGGCTGCCCCATGCTGTACGAGTCAG...TGCCCATAGACCACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp CCACCTCTGGCTGCGTGTGTAGCTGGCCCCATGCTGGTATCTCCTTTGGTATGGTGCTGGTATCTCCTTTaGTATGGTCCCAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: PPLAACVAGPMLVSPLVWCWYLL*YGPSAR
Trigger: CCGAGCACTGGGACCATACCAAAGGAGATACCAGCA...CCATACCAAAGGAGATACCAGCATGGGGCCAGCTACACACGCAGCCAGAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GAGGTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATGAAGGGCTGCGTGTGTAGCTaGCCCCATGCTGGTATCTCC +
Preference number: 4 (lower is better)
Translates to: EVWGGSSRIRQVQRAVMKGCVCS*PHAGIS
Trigger: GGAGATACCAGCATGGGGCCAGCTACACACGCAGCC...CTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp TATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTCTGCCGAAGCCCTCCTaGGTCCTCTACAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: YRWNLPKPSWVLYRFGAPLPKPS*VLYRFG
Trigger: TCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAG...AGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTCCACCTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTGGACGCCTGTCCAATCTACTGTCCTGCCTaGTTTCTATCCACACCAGCA +
Preference number: 4 (lower is better)
Translates to: CRSPPGSSTGLELLDACPIYCPA*FLSTPA
Trigger: TGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGAT...TGGACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GGGTCAGGGCGCAAGATGCTCTGCAAGCTCACATCCAGCAGGCGTGTGCTGGCAATCTACTGTCCTGCCTaGTTTCTATCCACACCAGCA +
Preference number: 4 (lower is better)
Translates to: GSGRKMLCKLTSSRRVLAIYCPA*FLSTPA
Trigger: TGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGAT...TGCCAGCACACGCCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp GATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGAGGGGTAACCTGGTACTaGCTCTACCCGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: DPTIGIYCPAWFLSTPARGVTWY*LYPQAL
Trigger: CAGGGCCTGCGGGTAGAGTCAGTACCAGGTTACCCC...TCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp AGAATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTGGAGATGAATGTGGTCTAGGGGTAACCTGGTACTaGCTCTACCCGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RIRQVQRAVMKGGDECGLGVTWY*LYPQAL
Trigger: CAGGGCCTGCGGGTAGAGTCAGTACCAGGTTACCCC...TAGACCACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCTGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR TCA 90 bp AGACAGGTTCAGCGGGCAGTCATGAAGGGTGGAGATGAATGTGGTCTATGGGCACAGCCACAGCATCTGTaGTCACCTCCTCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RQVQRAVMKGGDECGLWAQPQHL*SPPPVQ
Trigger: CTGGACTGGAGGAGGTGATCACAGATGCTGTGGCTG...TGCCCATAGACCACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR TCA 90 bp ATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTGGAGATGAATGTGGTCTATGGGAAAGTCCCGGGCACTaGCTCGTACAGCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: IRQVQRAVMKGGDECGLWESPGH*LVQHGA
Trigger: TGCCCCATGCTGTACGAGTCAGTGCCCGGGACTTTC...CCATAGACCACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR TCA 90 bp ATCCAGGGTCTGGCAGATGTAGGTGCCCTCATCAGTGCTGTCTGCCTGGGCCAGAACAGAACTTCCAGCTaGGATCCAACCATAGGGATC +
Preference number: 4 (lower is better)
Translates to: IQGLADVGALISAVCLGQNRTSS*DPTIGI
Trigger: GATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTT...CTGGCCCAGGCAGACAGCACTGATGAGGGCACCTACATCTGCCAGACCCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555247.5
CDS-3UTR TCA 90 bp GAGGTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATGAAGGTGAGGATCAGAGGCTaGGGGACCAATGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: EVWGGSSRIRQVQRAVMKVRIRG*GTNGSH
Trigger: GTGACTGCCATTGGTCCCTCAGCCTCTGATCCTCAC...CTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR TCA 90 bp TGGGGGATGGAGGTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCATTCAGCGGGCAGTCATaGAGGGTGGAGATGAATGTG +
Preference number: 4 (lower is better)
Translates to: WGMEVWGGSSRIRQVQRAFSGQS*RVEMNV
Trigger: CACATTCATCTCCACCCTTCATGACTGCCCGCTGAA...TGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATACCTCCATCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp TTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCACGGACCTGCCTGGCTaGCCATACTGGACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: FLEQNSNSGVKSEVQAPFTDLPG*PYWTPG
Trigger: CCCAGGGGTCCAGTATGGGCAGCCAGGCAGGTCCGT...GAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCTCATCAGTGCTGTCTaGCTGGGCCAGGACCAGTTC +
Preference number: 4 (lower is better)
Translates to: STPARQNYRWNLPKPSWVLISAV*LGQDQF
Trigger: GAACTGGTCCTGGCCCAGGCAGACAGCACTGATGAG...GACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp GGCTCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCAGGTGCCCTCATCAGTaGTGTCTGCCTGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GSKQNFQLRSNHRDLLSCRCPHQ*CLPGPG
Trigger: TCCTGGCCCAGGCAGACAGCACTGATGAGGGCACCT...GCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp TATGGGCATCAGAGCATGTGTGAGGATCAGAGGCTGAGGGACCAATGGCAGTCAGGGCGCAAGATGCTCTaGAAGCTCACATCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: YGHQSMCEDQRLRDQWQSGRKML*KLTSSR
Trigger: CCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCC...TGACTGCCATTGGTCCCTCAGCCTCTGATCCTCACACATGCTCTGATGCCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp GTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTTGCGCCGGACGGTACTaGAAACGGAACTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VWGGSSRIRQVQRAVMKGCAGRY*KRNLSR
Trigger: CCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCA...ACCCTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp TCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGCCTCCGGGCTCCAGGTaGTCCAGGTGCCAGCATCTA +
Preference number: 4 (lower is better)
Translates to: SKQNFQLRSNHRDLLSCLPPGSR*SRCQHL
Trigger: TAGATGCTGGCACCTGGAGCACCTGGAGCCCGGAGG...CAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp CCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGCCTCCGGGCTCCAGGTaGTCCAGGTGCCAGCATCTA +
Preference number: 4 (lower is better)
Translates to: PAWFLSTPARQNYRWNLPPPGSR*SRCQHL
Trigger: TAGATGCTGGCACCTGGAGCACCTGGAGCCCGGAGG...CGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp AGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGCCTCCGGGCTCCAGGTaGTCCAGGTGCCAGCATCTA +
Preference number: 4 (lower is better)
Translates to: RSNHRDLLSCLVSIHTSKPPGSR*SRCQHL
Trigger: TAGATGCTGGCACCTGGAGCACCTGGAGCCCGGAGG...CTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp ACGTTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTCCTCCGGGCTCCAGGTaGTCCAGGTGCCAGCATCTA +
Preference number: 4 (lower is better)
Translates to: TFLEQNSNSGVKSEVQAPPPGSR*SRCQHL
Trigger: TAGATGCTGGCACCTGGAGCACCTGGAGCCCGGAGG...AGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GAGGTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATGAAGTTGGTATGGTCCCAGTaGTCGGAGTTCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: EVWGGSSRIRQVQRAVMKLVWSQ*SEFPRP
Trigger: AGGCCTGGGGAACTCCGAGCACTGGGACCATACCAA...CTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp CCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGGGCTCCACCTCTGGCTaGGTGTGTAGCTGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: PAWFLSTPARQNYRWNLPGSTSG*VCSWPH
Trigger: ATGGGGCCAGCTACACACGCAGCCAGAGGTGGAGCC...CGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACGGCTCCACCTCTGGCTaGGTGTGTAGCTGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: FQLRSNHRDLLSCLVSIHGSTSG*VCSWPH
Trigger: ATGGGGCCAGCTACACACGCAGCCAGAGGTGGAGCC...GTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp AGGTTTGGAGCTCCTGGACGCCTGTCCACTGGAATCACTGAGGCCAAGAACCCAATTATAGGTGGAATCTaGCGAAGCCCTCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RFGAPGRLSTGITEAKNPIIGGI*RSPPGS
Trigger: GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAAT...TGGGTTCTTGGCCTCAGTGATTCCAGTGGACAGGCGTCCAGGAGCTCCAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GACTCTACCCGCAGGCCCTGGGGTGGGTCAGGGCGCAAGATGCTCTGCAAGCTCCAAGCACCTTTCAGCTaGAAATTTGAAATACAGGGT +
Preference number: 4 (lower is better)
Translates to: DSTRRPWGGSGRKMLCKLQAPFS*KFEIQG
Trigger: ACCCTGTATTTCAAATTTGCAGCTGAAAGGTGCTTG...GAGCTTGCAGAGCATCTTGCGCCCTGACCCACCCCAGGGCCTGCGGGTAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp AGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGCTTCACGGACCTGCCTaGCTGCCCATACTGGACCCC +
Preference number: 4 (lower is better)
Translates to: RSNHRDLLSCLVSIHTSKLHGPA*LPILDP
Trigger: GGGGTCCAGTATGGGCAGCCAGGCAGGTCCGTGAAG...CTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCGACAACAGGGCGGGCTaGAGGGTAGCCCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: WFLSTPARQNYRWNLPKPDNRAG*RVAQLQ
Trigger: CTGCAGCTGGGCTACCCTCCAGCCCGCCCTGTTGTC...GGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR CCA 90 bp GGGATGGAGGTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCGATGGACTCCTCCTCTaGCTATCAGCTCCTAGGACT +
Preference number: 4 (lower is better)
Translates to: GMEVWGGSSRIRQVQRAVDGLLL*LSAPRT
Trigger: AGTCCTAGGAGCTGATAGCCAGAGGAGGAGTCCATC...GACTGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATACCTCCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp GGCTCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCCAGGGCCCTGTGGATaGACTCCTCCTCTGGCTATC +
Preference number: 4 (lower is better)
Translates to: GSKQNFQLRSNHRDLLSCPGPCG*TPPLAI
Trigger: GATAGCCAGAGGAGGAGTCCATCCACAGGGCCCTGG...GCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp AGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGCAGAACTCAGCCCCGTaGACAACACAGCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RSNHRDLLSCLVSIHTSKQNSAP*TTQRAA
Trigger: GGCTGCCCGCTGTGTTGTCCACGGGGCTGAGTTCTG...CTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACACAGAACTCAGCCCCGTaGACAACACAGCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SNHRDLLSCLVSIHTSKTQNSAP*TTQRAA
Trigger: GGCTGCCCGCTGTGTTGTCCACGGGGCTGAGTTCTG...TGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp AGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGCCAGCAGGCGTGTGCTaGCACCCAGTGGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: RSNHRDLLSCLVSIHTSKPAGVC*HPVGSP
Trigger: AGGTGAACCCACTGGGTGCCAGCACACGCCTGCTGG...CTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTACCGCAGGCCCTGGGGTaGGTCAGGGCGCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELPQALG*VRAQDA
Trigger: AGCATCTTGCGCCCTGACCCACCCCAGGGCCTGCGG...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATCTACCCGCAGGCCCTaGGGTGGGTCAGGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELSTRRP*GGSGRK
Trigger: CTTGCGCCCTGACCCACCCCAGGGCCTGCGGGTAGA...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCAGGGTATGTCCAGCTaGCTCGCAGGCGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: PGFYPHQQDRIIGGICRSQGMSS*LAGVGG
Trigger: ACCCCCGACGCCTGCGAGCCAGCTGGACATACCCTG...GCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGGGCTGCGTGTGTAGCTaGCCCCATGCTGGTATCTCC +
Preference number: 4 (lower is better)
Translates to: PTIGIYCPAWFLSTPARQGCVCS*PHAGIS
Trigger: GGAGATACCAGCATGGGGCCAGCTACACACGCAGCC...CTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGGCTGCGTGTGTAGCTaGCCCCATGCTGGTATCTCC +
Preference number: 4 (lower is better)
Translates to: DRIIGGICRSPPGSSTGLGCVCS*PHAGIS
Trigger: GGAGATACCAGCATGGGGCCAGCTACACACGCAGCC...CAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTCAAGAACCCAGGCTTTaGGGATCCATCCTTCCCACC +
Preference number: 4 (lower is better)
Translates to: YRWNLPKPSWVLYRFGAPQEPRL*GSILPT
Trigger: GGTGGGAAGGATGGATCCCCAAAGCCTGGGTTCTTG...AGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTCCACCTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GTTCACCTCAGTCACATTAATCCGGTACTGGCTCCAGAACTCAGCCCCGTGGACCAGGTTTGGAGCTCCTaGACGCCTGTCCACTGGAAT +
Preference number: 4 (lower is better)
Translates to: VHLSHINPVLAPELSPVDQVWSS*TPVHWN
Trigger: ATTCCAGTGGACAGGCGTCCAGGAGCTCCAAACCTG...GTCCACGGGGCTGAGTTCTGGAGCCAGTACCGGATTAATGTGACTGAGGTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCTGCCGAAGCCCTCCTaGGTCCTCTACAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: STPARQNYRWNLPKPSWVLPKPS*VLYRFG
Trigger: TCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAG...GACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TGGGGGATGGAGGTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCATGGGGGATGGAGGTATaGGGAGGTAGTTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: WGMEVWGGSSRIRQVQRAWGMEV*GGSSRI
Trigger: GATTCTGGAACTACCTCCCCATACCTCCATCCCCCA...TGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATACCTCCATCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR TCA 90 bp TTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACGGGTGGGTAAACCGCTaGTCTGGCTGGGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: FQLRSNHRDLLSCLVSIHGWVNR*SGWDSK
Trigger: CTTGGAGTCCCAGCCAGATCAGCGGTTTACCCACCC...GTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp TTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCGGGGTAACCTGGTACTaGCTCTACCCGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: FLEQNSNSGVKSEVQAPFGVTWY*LYPQAL
Trigger: CAGGGCCTGCGGGTAGAGTCAGTACCAGGTTACCCC...GAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp TTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGGTAACCTGGTACTaGCTCTACCCGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: FYPHQQDRIIGGICRSPPGVTWY*LYPQAL
Trigger: CAGGGCCTGCGGGTAGAGTCAGTACCAGGTTACCCC...AGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp ATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTGGAGATGAATGTGGTCTATGGACTGCAAACGGAACTTaGGCAGGAAGTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: IRQVQRAVMKGGDECGLWTANGT*AGSGAG
Trigger: GCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGT...CCATAGACCACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR TCA 90 bp GATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGAGAAAGTCCCGGGCACTaGCTCGTACAGCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: DPTIGIYCPAWFLSTPARESPGH*LVQHGA
Trigger: TGCCCCATGCTGTACGAGTCAGTGCCCGGGACTTTC...TCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp AGGAAAGAAAGGATTCCCAAAGACGCCAGCACAGCTACCTGCTCCACAGAGTCCTCCACAGAGTCCCTGTaGTCAAGTAGCCGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: RKERIPKDASTATCSTESSTESL*SSSRGC
Trigger: ACACCCTCGGCTACTTGATCACAGGGACTCTGTGGA...GGACTCTGTGGAGCAGGTAGCTGTGCTGGCGTCTTTGGGAATCCTTTCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp TCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCGTCCACTGGAATCACTaGGGCCAAGAACCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: STPARQNYRWNLPKPSWVVHWNH*GQEPRL
Trigger: AAGCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGAC...GACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp AGGTGGAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTGGAAACAGAACTTCCAGCTaGGATCCAACCATAGGGATC +
Preference number: 4 (lower is better)
Translates to: RWNLPKPSWVLYRFGAPGNRTSS*DPTIGI
Trigger: GATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTT...TCCAGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp AACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCTCCTGGGTCTCCGCCTaGAGGCCTATCCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: NFQLRSNHRDLLSCLVSISWVSA*RPIHPG
Trigger: TCCAGGGTGGATAGGCCTTCAGGCGGAGACCCAGGA...GATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR TCA 90 bp TTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCTGTCCCGTCCCGGACTaGAGAGGCTGCTTGGGACAG +
Preference number: 4 (lower is better)
Translates to: FLEQNSNSGVKSEVQAPFCPVPD*RGCLGQ
Trigger: CTGTCCCAAGCAGCCTCTTCAGTCCGGGACGGGACA...GAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR GCA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTAACGGACCTGCCTGGCTaGCCATACTGGACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELTDLPG*PYWTPG
Trigger: CCCAGGGGTCCAGTATGGGCAGCCAGGCAGGTCCGT...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000557298.5
CDS-3UTR GCA 90 bp CCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAGGTGCCCTCATCAGTaGTGTCTGCCTGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PAWFLSTPARQNYRWNLPRCPHQ*CLPGPG
Trigger: TCCTGGCCCAGGCAGACAGCACTGATGAGGGCACCT...CGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp CCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGCACTGTGCCCCCAAGTaGACCATCCAGGGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: PAWFLSTPARQNYRWNLPHCAPK*TIQGLA
Trigger: TGCCAGACCCTGGATGGTGCACTTGGGGGCACAGTG...CGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp GTTCACCTCAGTCACATTAATCCGGTACTGGCTCCAGAACTCAGCCCCGTGGACGTTCTCATAGTCGGCTaGTTGGCAGGAGACAACAGG +
Preference number: 4 (lower is better)
Translates to: VHLSHINPVLAPELSPVDVLIVG*LAGDNR
Trigger: CCTGTTGTCTCCTGCCAAGCAGCCGACTATGAGAAC...GTCCACGGGGCTGAGTTCTGGAGCCAGTACCGGATTAATGTGACTGAGGTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TATGGGCATCAGAGCATGTGTGAGGATCAGAGGCTGAGGGACCAATGGCAGTCAGGTCAGGGCGCAAGATaGTCTGCAAGCTCACATCCA +
Preference number: 4 (lower is better)
Translates to: YGHQSMCEDQRLRDQWQSGQGAR*SASSHP
Trigger: TGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACC...TGACTGCCATTGGTCCCTCAGCCTCTGATCCTCACACATGCTCTGATGCCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCGTGGACCAGGCTGGATaGTGCGCCGGACGGTACTGC +
Preference number: 4 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGIVDQAG*CAGRYC
Trigger: GCAGTACCGTCCGGCGCAGCATCCAGCCTGGTCCAC...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp AAAGAAAGGATTCCCAAAGACGCCAGCACAGCTACCTGCTCCACAGAGTCCCTGTCCAGGTGCTCCAGGTaGCAGCATCTAGAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: KERIPKDASTATCSTESLSRCSR*QHLESP
Trigger: GGGACTTTCTAGATGCTGGCACCTGGAGCACCTGGA...CAGGGACTCTGTGGAGCAGGTAGCTGTGCTGGCGTCTTTGGGAATCCTTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp CAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCTTGGTATGGTCCCAGTaGTCGGAGTTCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QLRSNHRDLLSCLVSIHTLVWSQ*SEFPRP
Trigger: AGGCCTGGGGAACTCCGAGCACTGGGACCATACCAA...GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GAATCTGCCGAAGCCCTCCTGGGTCCTCTACAGGTTTGGAGCTCCTGGACGCCTAGAATACATGTTCCCTaGCTCACAGACACATGGTCA +
Preference number: 4 (lower is better)
Translates to: ESAEALLGPLQVWSSWTPRIHVP*LTDTWS
Trigger: TGACCATGTGTCTGTGAGGCAGGGAACATGTATTCT...AGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCGCCCTGAGCAGCTGCTaGTCATCTTCCGCGGCCGCT +
Preference number: 4 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGIALSSC*SSSAAA
Trigger: AGCGGCCGCGGAAGATGAGCAGCAGCTGCTCAGGGC...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441545.7
ENST00000555247.5
CDS-3UTR GCA 90 bp AGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGTCAGCCCTGAGCAGCTaGTGCTCATCTCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: RSNHRDLLSCLVSIHTSKSALSS*CSSPPP
Trigger: TGGGGGTGGAGATGAGCAGCAGCTGCTCAGGGCTGA...CTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CCA 90 bp CTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGTCCCTGGAGCAGCTTTaGCTCCCCATCCCGAAACCA +
Preference number: 4 (lower is better)
Translates to: LSTPARQNYRWNLPKPSWSLEQL*LPIPKP
Trigger: TGGTTTCGGGATGGGGAGCCAAAGCTGCTCCAGGGA...CCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR CCA 90 bp GATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACCAGGGCCCTGTGGATaGACTCCTCCTCTGGCTATC +
Preference number: 4 (lower is better)
Translates to: DPTIGIYCPAWFLSTPARPGPCG*TPPLAI
Trigger: GATAGCCAGAGGAGGAGTCCATCCACAGGGCCCTGG...TCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCCAGAACTCAGCCCCGTaGACAACACAGCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FLEQNSNSGVKSEVQAPFQNSAP*TTQRAA
Trigger: GGCTGCCCGCTGTGTTGTCCACGGGGCTGAGTTCTG...GAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp AACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCAGAACTCAGCCCCGTaGACAACACAGCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: NFQLRSNHRDLLSCLVSIQNSAP*TTQRAA
Trigger: GGCTGCCCGCTGTGTTGTCCACGGGGCTGAGTTCTG...GATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCAGCAGGCGTGTGCTaGCACCCAGTGGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: AWFLSTPARQNYRWNLPKPAGVC*HPVGSP
Trigger: AGGTGAACCCACTGGGTGCCAGCACACGCCTGCTGG...CTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TGTGGGTTATCTCAGTCTCCGCCAAAGGGTTTATTAGTAAAGGGTCAGGAGAGGCCAGCAGGCGTGTGCTaGCACCCAGTGGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: CGLSQSPPKGLLVKGQERPAGVC*HPVGSP
Trigger: AGGTGAACCCACTGGGTGCCAGCACACGCCTGCTGG...CCTCTCCTGACCCTTTACTAATAAACCCTTTGGCGGAGACTGAGATAACCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp TCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTGAAAGCAGGAAGTGGGGCTaGCACGGCCAGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SNSGVKSEVQAPFSCKFESRKWG*HGQEAG
Trigger: CCCTGCCTCCTGGCCGTGCCAGCCCCACTTCCTGCT...TTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCACCGTGGACCAGGCTaGATGCTGCGCCGGACGGTA +
Preference number: 4 (lower is better)
Translates to: CPAWFLSTPARQNYRWNLHRGPG*MLRRTV
Trigger: TACCGTCCGGCGCAGCATCCAGCCTGGTCCACGGTG...CAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGACTCCTCCAGTCCAGCTaGCTCCACCGTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: STVLPGFYPHQQDRIIGGLLQSS*LHRGPG
Trigger: GCCTGGTCCACGGTGGAGCCAGCTGGACTGGAGGAG...TCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp ACCTACATACATGCATGCAGAGAATACATGTTCCCTGCCTCACAGACACATGGTCTCCTCCAGTCCAGCTaGCTCCACCGTGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: TYIHACREYMFPASQTHGLLQSS*LHRGPG
Trigger: GCCTGGTCCACGGTGGAGCCAGCTGGACTGGAGGAG...ACCATGTGTCTGTGAGGCAGGGAACATGTATTCTCTGCATGCATGTATGTAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGCTGACTCGTACAGCATaGGGCAGCCCAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SKQNFQLRSNHRDLLSCLLTRTA*GSPATA
Trigger: TGCTGTGGCTGGGCTGCCCCATGCTGTACGAGTCAG...CAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GTGTGTAGCTGGCCCCATGCTGGTATCTCCTTTGGTATGGTCCCAGTGCTCGGAGTATCTCCTTTGGTATaGTCCCAGTGCTCGGAGTTC +
Preference number: 4 (lower is better)
Translates to: VCSWPHAGISFGMVPVLGVSPLV*SQCSEF
Trigger: GAACTCCGAGCACTGGGACCATACCAAAGGAGATAC...TCCGAGCACTGGGACCATACCAAAGGAGATACCAGCATGGGGCCAGCTACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACGGCTGCGTGTGTAGCTaGCCCCATGCTGGTATCTCC +
Preference number: 4 (lower is better)
Translates to: FQLRSNHRDLLSCLVSIHGCVCS*PHAGIS
Trigger: GGAGATACCAGCATGGGGCCAGCTACACACGCAGCC...GTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGGGCTGCGTGTGTAGCTaGCCCCATGCTGGTATCTCC +
Preference number: 4 (lower is better)
Translates to: PAWFLSTPARQNYRWNLPGCVCS*PHAGIS
Trigger: GGAGATACCAGCATGGGGCCAGCTACACACGCAGCC...CGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCCGAGGGTGTGGTTaGAGGGAGGGCCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: FLEQNSNSGVKSEVQAPFSRGCG*REGLGG
Trigger: TCCTCCAAGGCCCTCCCTCCAACCACACCCTCGGCT...GAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TGTGGGTTATCTCAGTCTCCGCCAAAGGGTTTATTAGTAAAGGGTCAGGAGAGGAGCCGAGGGTGTGGTTaGAGGGAGGGCCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: CGLSQSPPKGLLVKGQERSRGCG*REGLGG
Trigger: TCCTCCAAGGCCCTCCCTCCAACCACACCCTCGGCT...CCTCTCCTGACCCTTTACTAATAAACCCTTTGGCGGAGACTGAGATAACCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp AGGAAAGAAAGGATTCCCAAAGACGCCAGCACAGCTACCTGCTCCACAGAGTCCCAAGAACCCAGGCTTTaGGGATCCATCCTTCCCACC +
Preference number: 4 (lower is better)
Translates to: RKERIPKDASTATCSTESQEPRL*GSILPT
Trigger: GGTGGGAAGGATGGATCCCCAAAGCCTGGGTTCTTG...GGACTCTGTGGAGCAGGTAGCTGTGCTGGCGTCTTTGGGAATCCTTTCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCGTCTCAGCCTCAGCCTaGGGCATAGAAAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QLRSNHRDLLSCLVSIHTVSASA*GIERQL
Trigger: CAGCTGCCTTTCTATGCCCCAGGCTGAGGCTGAGAC...GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466082.1
CDS-3UTR TCA 90 bp CCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGTGCTGCTCATCTCGGTaGTCCCAGCAGCAGAGTGTC +
Preference number: 4 (lower is better)
Translates to: PAWFLSTPARQNYRWNLPCCSSR*SQQQSV
Trigger: GACACTCTGCTGCTGGGATCACCGAGATGAGCAGCA...CGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318041.13
ENST00000557298.5
CDS-3UTR TCA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTAGGGGTAACCTGGTACTaGCTCTACCCGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELGVTWY*LYPQAL
Trigger: CAGGGCCTGCGGGTAGAGTCAGTACCAGGTTACCCC...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp GATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGAACTGCAAACGGAACTTaGGCAGGAAGTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: DPTIGIYCPAWFLSTPARTANGT*AGSGAG
Trigger: GCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGT...TCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp TTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACTGCAAACGGAACTTaGGCAGGAAGTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: FQLRSNHRDLLSCLVSIHTANGT*AGSGAG
Trigger: GCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGT...GTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp ACGTTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTCAGCCACAGCATCTGTaGTCACCTCCTCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TFLEQNSNSGVKSEVQAPQPQHL*SPPPVQ
Trigger: CTGGACTGGAGGAGGTGATCACAGATGCTGTGGCTG...AGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp GCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGGAAAGTCCCGGGCACTaGCTCGTACAGCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: AWFLSTPARQNYRWNLPKESPGH*LVQHGA
Trigger: TGCCCCATGCTGTACGAGTCAGTGCCCGGGACTTTC...CTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp CCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCACTCCAACTCTGGGGTaGAATCAGAGGTACAAGCAC +
Preference number: 4 (lower is better)
Translates to: PHQQDRIIGGICRSPPGSTPTLG*NQRYKH
Trigger: GTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGT...GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp AGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCCGGCCACCAGGACCCTaGTCAGCCCTGAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SCKFEIQGLTEMGSKQNFRPPGP*SALSSC
Trigger: GCAGCTGCTCAGGGCTGAGCAGGGTCCTGGTGGCCG...GAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCCAGCGGCCACCAGGACCCTaGTCAGCCCTGAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CKFEIQGLTEMGSKQNFQRPPGP*SALSSC
Trigger: GCAGCTGCTCAGGGCTGAGCAGGGTCCTGGTGGCCG...CTGGAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGCCAGGACCAGTTCATaGCCTAGCCCAGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SKQNFQLRSNHRDLLSCLARTSS*PSPESG
Trigger: ACCTGACTCTGGGCTAGGGCATGAACTGGTCCTGGC...CAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp TCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCTCTGGCAGATGTAGGTaGCCTCATCAGTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: STPARQNYRWNLPKPSWVSGRCR*PHQCCL
Trigger: CAGACAGCACTGATGAGGGCACCTACATCTGCCAGA...GACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp GCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCACTGTGCCCCCAAGTaGACCATCCAGGGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: AWFLSTPARQNYRWNLPKHCAPK*TIQGLA
Trigger: TGCCAGACCCTGGATGGTGCACTTGGGGGCACAGTG...CTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp GAGGTATGGGGAGGTAGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATGAAGGTTCTCATAGTCGGCTaGTTGGCAGGAGACAACAGG +
Preference number: 4 (lower is better)
Translates to: EVWGGSSRIRQVQRAVMKVLIVG*LAGDNR
Trigger: CCTGTTGTCTCCTGCCAAGCAGCCGACTATGAGAAC...CTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp TCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGGGCGCAAGATGCTCTaGAAGCTCACATCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SNHRDLLSCLVSIHTSKTGRKML*KLTSSR
Trigger: CCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCC...TGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACGGGCGCAAGATGCTCTaGAAGCTCACATCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FQLRSNHRDLLSCLVSIHGRKML*KLTSSR
Trigger: CCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCC...GTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp CCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGGGTCAGGGCGCAAGATaGTCTGCAAGCTCACATCCA +
Preference number: 4 (lower is better)
Translates to: PTIGIYCPAWFLSTPARQGQGAR*SASSHP
Trigger: TGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACC...CTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp ACGTTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTGCGCCGGACGGTACTaGAAACGGAACTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TFLEQNSNSGVKSEVQAPCAGRY*KRNLSR
Trigger: CCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCA...AGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGGACCAGGCTGGATGCTaGGCCGGACGGTACTGCAAA +
Preference number: 4 (lower is better)
Translates to: AWFLSTPARQNYRWNLPKDQAGC*AGRYCK
Trigger: TTTGCAGTACCGTCCGGCGCAGCATCCAGCCTGGTC...CTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TTATTAGTAAAGGGTCAGGAGAGGAATCAGTTAAAATCAAGTGGGGCATGGGGGGTGGACCAGGCTGGATaGTGCGCCGGACGGTACTGC +
Preference number: 4 (lower is better)
Translates to: LLVKGQERNQLKSSGAWGVDQAG*CAGRYC
Trigger: GCAGTACCGTCCGGCGCAGCATCCAGCCTGGTCCAC...CCCCCATGCCCCACTTGATTTTAACTGATTCCTCTCCTGACCCTTTACTAATAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp CAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCTCCAGGTGCTCCAGGTaGCAGCATCTAGAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: QLRSNHRDLLSCLVSIHTSRCSR*QHLESP
Trigger: GGGACTTTCTAGATGCTGGCACCTGGAGCACCTGGA...GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGACCTCCGGGCTCCAGGTaGTCCAGGTGCCAGCATCTA +
Preference number: 4 (lower is better)
Translates to: STVLPGFYPHQQDRIIGGPPGSR*SRCQHL
Trigger: TAGATGCTGGCACCTGGAGCACCTGGAGCCCGGAGG...TCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp AGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGCACCTGCACAACCCCTaGAAGGGGAAAGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: RSNHRDLLSCLVSIHTSKHLHNP*KGKGQE
Trigger: CTCTTGGCCTTTCCCCTTGCAGGGGTTGTGCAGGTG...CTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp TGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGGCCCTGAGCAGCTGCTaGTCATCTCCACCCCCACCT +
Preference number: 4 (lower is better)
Translates to: CPAWFLSTPARQNYRWNLALSSC*SSPPPP
Trigger: AGGTGGGGGTGGAGATGAGCAGCAGCTGCTCAGGGC...CAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CCA 90 bp TTATTAGTAAAGGGTCAGGAGAGGAATCAGTTAAAATCAAGTGGGGCATGGGGGGACAACAGGGCGGGCTaGAGGGTAGCCCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLVKGQERNQLKSSGAWGDNRAG*RVAQLQ
Trigger: CTGCAGCTGGGCTACCCTCCAGCCCGCCCTGTTGTC...CCCCCATGCCCCACTTGATTTTAACTGATTCCTCTCCTGACCCTTTACTAATAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp TTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTCCAGGGCCCTGTGGATaGACTCCTCCTCTGGCTATC +
Preference number: 4 (lower is better)
Translates to: FYPHQQDRIIGGICRSPPPGPCG*TPPLAI
Trigger: GATAGCCAGAGGAGGAGTCCATCCACAGGGCCCTGG...AGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TATGGGCATCAGAGCATGTGTGAGGATCAGAGGCTGAGGGACCAATGGCAGTCAACATTAATCCGGTACTaGCTCCAGAACTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: YGHQSMCEDQRLRDQWQSTLIRY*LQNSAP
Trigger: CGGGGCTGAGTTCTGGAGCCAGTACCGGATTAATGT...TGACTGCCATTGGTCCCTCAGCCTCTGATCCTCACACATGCTCTGATGCCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp TCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTGAACAGGGTATGTCCAGCTaGCTCGCAGGCGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: SNSGVKSEVQAPFSCKFEQGMSS*LAGVGG
Trigger: ACCCCCGACGCCTGCGAGCCAGCTGGACATACCCTG...TTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCCTGACTCGTACAGCATaGGGCAGCCCAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: FLEQNSNSGVKSEVQAPFLTRTA*GSPATA
Trigger: TGCTGTGGCTGGGCTGCCCCATGCTGTACGAGTCAG...GAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACTGCCGAAGCCCTCCTaGGTCCTCTACAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: DPTIGIYCPAWFLSTPARLPKPS*VLYRFG
Trigger: TCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAG...TCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CTCTACAGGTTTGGAGCTCCTGGACGCCTGTCCACTGGAATCACTGAGGCCAAGAGACAGAATTATAGGTaGAATCTGCCGAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LYRFGAPGRLSTGITEAKRQNYR*NLPKPS
Trigger: GGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCT...CTTGGCCTCAGTGATTCCAGTGGACAGGCGTCCAGGAGCTCCAAACCTGTAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466082.1
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGACAGAGTCTGGAGCTaGATTCCTGGGTCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: SKQNFQLRSNHRDLLSCLDRVWS*IPGSPP
Trigger: AGGCGGAGACCCAGGAATCCAGCTCCAGACTCTGTC...CAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CCA 90 bp CAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCACTGAAGAGGCTGCTTaGGACAGAGTCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QLRSNHRDLLSCLVSIHTTEEAA*DRVWSW
Trigger: CCAGCTCCAGACTCTGTCCCAAGCAGCCTCTTCAGT...GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR TCA 90 bp GCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCAGCCACAGCATCTGTaGTCACCTCCTCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: AWFLSTPARQNYRWNLPKQPQHL*SPPPVQ
Trigger: CTGGACTGGAGGAGGTGATCACAGATGCTGTGGCTG...CTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCGAAAGTCCCGGGCACTaGCTCGTACAGCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGIESPGH*LVQHGA
Trigger: TGCCCCATGCTGTACGAGTCAGTGCCCGGGACTTTC...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp TCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACATCCACAGAGTCCCTGTaGTCAAGTAGCCGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SNHRDLLSCLVSIHTSKTSTESL*SSSRGC
Trigger: ACACCCTCGGCTACTTGATCACAGGGACTCTGTGGA...TGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp AGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTGGAGATGAATGTTCCACAGAGTCCCTGTaGTCAAGTAGCCGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SSRIRQVQRAVMKGGDECSTESL*SSSRGC
Trigger: ACACCCTCGGCTACTTGATCACAGGGACTCTGTGGA...ACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR TCA 90 bp GATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGAGTCCACTGGAATCACTaGGGCCAAGAACCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: DPTIGIYCPAWFLSTPARVHWNH*GQEPRL
Trigger: AAGCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGAC...TCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp TCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCACTCCAACTCTGGGGTaGAATCAGAGGTACAAGCAC +
Preference number: 4 (lower is better)
Translates to: STPARQNYRWNLPKPSWVTPTLG*NQRYKH
Trigger: GTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGT...GACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTAGACCCTGCTCAGCCCTaGGCAGCTGCTGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELDPAQP*AAAAHL
Trigger: AAGATGAGCAGCAGCTGCTCAGGGCTGAGCAGGGTC...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441545.7
ENST00000555247.5
CDS-3UTR TCA 90 bp TCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGATGGTGCCCGCACATGTaGGAGTCTGGAGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: STVLPGFYPHQQDRIIGGWCPHM*ESGGAK
Trigger: CTTGGCTCCTCCAGACTCTCACATGTGCGGGCACCA...TCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR TCA 90 bp GCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGAGGTCCAGAGGGGACTaGATAGACCCCAGGTCACTC +
Preference number: 4 (lower is better)
Translates to: AWFLSTPARQNYRWNLPKRSRGD*IDPRSL
Trigger: GAGTGACCTGGGGTCTATTCAGTCCCCTCTGGACCT...CTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR GCA 90 bp AACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCACAGCTTCACGGACCTaGCTGGCTGCCCATACTGGA +
Preference number: 4 (lower is better)
Translates to: NFQLRSNHRDLLSCLVSITASRT*LAAHTG
Trigger: TCCAGTATGGGCAGCCAGGCAGGTCCGTGAAGCTGT...GATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TGTGGGTTATCTCAGTCTCCGCCAAAGGGTTTATTAGTAAAGGGTCAGGAGAGGGCCAGGACCAGTTCATaGCCTAGCCCAGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: CGLSQSPPKGLLVKGQERARTSS*PSPESG
Trigger: ACCTGACTCTGGGCTAGGGCATGAACTGGTCCTGGC...CCTCTCCTGACCCTTTACTAATAAACCCTTTGGCGGAGACTGAGATAACCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp TTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCCTCATCAGTGCTGTCTaGCTGGGCCAGGACCAGTTC +
Preference number: 4 (lower is better)
Translates to: FLEQNSNSGVKSEVQAPFLISAV*LGQDQF
Trigger: GAACTGGTCCTGGCCCAGGCAGACAGCACTGATGAG...GAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp TGTGGGTTATCTCAGTCTCCGCCAAAGGGTTTATTAGTAAAGGGTCAGGAGAGGCTCATCAGTGCTGTCTaGCTGGGCCAGGACCAGTTC +
Preference number: 4 (lower is better)
Translates to: CGLSQSPPKGLLVKGQERLISAV*LGQDQF
Trigger: GAACTGGTCCTGGCCCAGGCAGACAGCACTGATGAG...CCTCTCCTGACCCTTTACTAATAAACCCTTTGGCGGAGACTGAGATAACCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp CCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCGGGCGCAAGATGCTCTaGAAGCTCACATCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PGFYPHQQDRIIGGICRSGRKML*KLTSSR
Trigger: CCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCC...GCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp CCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCTGCGCCGGACGGTACTaGAAACGGAACTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PGFYPHQQDRIIGGICRSCAGRY*KRNLSR
Trigger: CCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCA...GCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTGCGCCGGACGGTACTaGAAACGGAACTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: WFLSTPARQNYRWNLPKPCAGRY*KRNLSR
Trigger: CCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCA...GGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGGACCAGGCTGGATGCTaGGCCGGACGGTACTGCAAA +
Preference number: 4 (lower is better)
Translates to: CPAWFLSTPARQNYRWNLDQAGC*AGRYCK
Trigger: TTTGCAGTACCGTCCGGCGCAGCATCCAGCCTGGTC...CAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGTCCAGGTGCTCCAGGTaGCAGCATCTAGAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: SKQNFQLRSNHRDLLSCLSRCSR*QHLESP
Trigger: GGGACTTTCTAGATGCTGGCACCTGGAGCACCTGGA...CAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp AGAATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTGGAGATGAATGTGGTCTATCCAGGTGCTCCAGGTaGCAGCATCTAGAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: RIRQVQRAVMKGGDECGLSRCSR*QHLESP
Trigger: GGGACTTTCTAGATGCTGGCACCTGGAGCACCTGGA...TAGACCACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCTGATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp CCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCTTGGTATGGTCCCAGTaGTCGGAGTTCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PGFYPHQQDRIIGGICRSLVWSQ*SEFPRP
Trigger: AGGCCTGGGGAACTCCGAGCACTGGGACCATACCAA...GCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCAGGGATCTACTGTCCTaGCTGGTTTCTATCCACACC +
Preference number: 4 (lower is better)
Translates to: STPARQNYRWNLPKPSWVRDLLS*LVSIHT
Trigger: GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCT...GACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCACCTGCACAACCCCTaGAAGGGGAAAGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: AWFLSTPARQNYRWNLPKHLHNP*KGKGQE
Trigger: CTCTTGGCCTTTCCCCTTGCAGGGGTTGTGCAGGTG...CTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp AACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACCTGCACAACCCCTaGAAGGGGAAAGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: NFQLRSNHRDLLSCLVSIHLHNP*KGKGQE
Trigger: CTCTTGGCCTTTCCCCTTGCAGGGGTTGTGCAGGTG...GATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR CCA 90 bp CCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGGGTAAACCGCTGATCTaGCTGGGACTCCAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: PTIGIYCPAWFLSTPARQGKPLI*LGLQVQ
Trigger: TTGCACTTGGAGTCCCAGCCAGATCAGCGGTTTACC...CTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGGTAAACCGCTGATCTaGCTGGGACTCCAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: LSTPARQNYRWNLPKPSWGKPLI*LGLQVQ
Trigger: TTGCACTTGGAGTCCCAGCCAGATCAGCGGTTTACC...CCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGATGGACTCCTCCTCTaGCTATCAGCTCCTAGGACT +
Preference number: 4 (lower is better)
Translates to: LSTPARQNYRWNLPKPSWDGLLL*LSAPRT
Trigger: AGTCCTAGGAGCTGATAGCCAGAGGAGGAGTCCATC...CCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGGATGGACTCCTCCTCTaGCTATCAGCTCCTAGGACT +
Preference number: 4 (lower is better)
Translates to: PTIGIYCPAWFLSTPARQDGLLL*LSAPRT
Trigger: AGTCCTAGGAGCTGATAGCCAGAGGAGGAGTCCATC...CTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCCCAGGGCCCTGTGGATaGACTCCTCCTCTGGCTATC +
Preference number: 4 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGIPGPCG*TPPLAI
Trigger: GATAGCCAGAGGAGGAGTCCATCCACAGGGCCCTGG...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGACATTAATCCGGTACTaGCTCCAGAACTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: PTIGIYCPAWFLSTPARQTLIRY*LQNSAP
Trigger: CGGGGCTGAGTTCTGGAGCCAGTACCGGATTAATGT...CTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp AGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCCAGGGTATGTCCAGCTaGCTCGCAGGCGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: SCKFEIQGLTEMGSKQNFQGMSS*LAGVGG
Trigger: ACCCCCGACGCCTGCGAGCCAGCTGGACATACCCTG...GAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCCTGACTCGTACAGCATaGGGCAGCCCAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGILTRTA*GSPATA
Trigger: TGCTGTGGCTGGGCTGCCCCATGCTGTACGAGTCAG...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTACTGACTCGTACAGCATaGGGCAGCCCAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELLTRTA*GSPATA
Trigger: TGCTGTGGCTGGGCTGCCCCATGCTGTACGAGTCAG...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TATGGGCATCAGAGCATGTGTGAGGATCAGAGGCTGAGGGACCAATGGCAGTCAGTATCTCCTTTGGTATaGTCCCAGTGCTCGGAGTTC +
Preference number: 4 (lower is better)
Translates to: YGHQSMCEDQRLRDQWQSVSPLV*SQCSEF
Trigger: GAACTCCGAGCACTGGGACCATACCAAAGGAGATAC...TGACTGCCATTGGTCCCTCAGCCTCTGATCCTCACACATGCTCTGATGCCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp ACCTACATACATGCATGCAGAGAATACATGTTCCCTGCCTCACAGACACATGGTGGCTGCGTGTGTAGCTaGCCCCATGCTGGTATCTCC +
Preference number: 4 (lower is better)
Translates to: TYIHACREYMFPASQTHGGCVCS*PHAGIS
Trigger: GGAGATACCAGCATGGGGCCAGCTACACACGCAGCC...ACCATGTGTCTGTGAGGCAGGGAACATGTATTCTCTGCATGCATGTATGTAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp AGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGCAAGAACCCAGGCTTTaGGGATCCATCCTTCCCACC +
Preference number: 4 (lower is better)
Translates to: RSNHRDLLSCLVSIHTSKQEPRL*GSILPT
Trigger: GGTGGGAAGGATGGATCCCCAAAGCCTGGGTTCTTG...CTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGCAGGTTTGGAGCTCCTaGACGCCTGTCCACTGGAAT +
Preference number: 4 (lower is better)
Translates to: SKQNFQLRSNHRDLLSCLQVWSS*TPVHWN
Trigger: ATTCCAGTGGACAGGCGTCCAGGAGCTCCAAACCTG...CAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp AACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCGGTCCTCTACAGGTTTaGAGCTCCTGGACGCCTGTC +
Preference number: 4 (lower is better)
Translates to: NFQLRSNHRDLLSCLVSIGPLQV*SSWTPV
Trigger: GACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACC...GATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCTGCCGAAGCCCTCCTaGGTCCTCTACAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: AWFLSTPARQNYRWNLPKLPKPS*VLYRFG
Trigger: TCCAAACCTGTAGAGGACCCAGGAGGGCTTCGGCAG...CTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CCCAGGAAAGAAAGGATTCCCAAAGACGCCAGCACAGCTACCTGCTCCACAGAGATCTACTGTCCTGCCTaGTTTCTATCCACACCAGCA +
Preference number: 4 (lower is better)
Translates to: PRKERIPKDASTATCSTEIYCPA*FLSTPA
Trigger: TGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGAT...CTCTGTGGAGCAGGTAGCTGTGCTGGCGTCTTTGGGAATCCTTTCTTTCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCAGAAAAACCCTGGTCTaGAAGGCAGGCAGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: STPARQNYRWNLPKPSWVRKTLV*KAGSQV
Trigger: AACTTGGCTGCCTGCCTTCCAGACCAGGGTTTTTCT...GACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR TCA 90 bp ACCTACATACATGCATGCAGAGAATACATGTTCCCTGCCTCACAGACACATGGTACTGCAAACGGAACTTaGGCAGGAAGTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TYIHACREYMFPASQTHGTANGT*AGSGAG
Trigger: GCCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGT...ACCATGTGTCTGTGAGGCAGGGAACATGTATTCTCTGCATGCATGTATGTAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp TGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCAGCCACAGCATCTGTaGTCACCTCCTCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: CPAWFLSTPARQNYRWNLQPQHL*SPPPVQ
Trigger: CTGGACTGGAGGAGGTGATCACAGATGCTGTGGCTG...CAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp TTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTTCCACAGAGTCCCTGTaGTCAAGTAGCCGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: FYPHQQDRIIGGICRSPPSTESL*SSSRGC
Trigger: ACACCCTCGGCTACTTGATCACAGGGACTCTGTGGA...AGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp TGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCGTCCACTGGAATCACTaGGGCCAAGAACCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: WFLSTPARQNYRWNLPKPVHWNH*GQEPRL
Trigger: AAGCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGAC...GGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp TTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCGTCCACTGGAATCACTaGGGCCAAGAACCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: FLEQNSNSGVKSEVQAPFVHWNH*GQEPRL
Trigger: AAGCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGAC...GAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp TCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCAACAGAACTTCCAGCTaGGATCCAACCATAGGGATC +
Preference number: 4 (lower is better)
Translates to: STPARQNYRWNLPKPSWVNRTSS*DPTIGI
Trigger: GATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTT...GACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCGAGCCACTGGCCAGGTaGTTGGAGAAGCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGIEPLAR*LEKLKV
Trigger: CACCTTCAGCTTCTCCAATCACCTGGCCAGTGGCTC...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR GCA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTAACAGCTTCACGGACCTaGCTGGCTGCCCATACTGGA +
Preference number: 4 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELTASRT*LAAHTG
Trigger: TCCAGTATGGGCAGCCAGGCAGGTCCGTGAAGCTGT...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000557298.5
CDS-3UTR GCA 90 bp ACCTACATACATGCATGCAGAGAATACATGTTCCCTGCCTCACAGACACATGGTACAGCTTCACGGACCTaGCTGGCTGCCCATACTGGA +
Preference number: 4 (lower is better)
Translates to: TYIHACREYMFPASQTHGTASRT*LAAHTG
Trigger: TCCAGTATGGGCAGCCAGGCAGGTCCGTGAAGCTGT...ACCATGTGTCTGTGAGGCAGGGAACATGTATTCTCTGCATGCATGTATGTAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000557298.5
CDS-3UTR GCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCGCCAGGACCAGTTCATaGCCTAGCCCAGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGIARTSS*PSPESG
Trigger: ACCTGACTCTGGGCTAGGGCATGAACTGGTCCTGGC...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp TCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAGCCAGGACCAGTTCATaGCCTAGCCCAGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: STVLPGFYPHQQDRIIGGARTSS*PSPESG
Trigger: ACCTGACTCTGGGCTAGGGCATGAACTGGTCCTGGC...TCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp ACCTACATACATGCATGCAGAGAATACATGTTCCCTGCCTCACAGACACATGGTGCCAGGACCAGTTCATaGCCTAGCCCAGAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: TYIHACREYMFPASQTHGARTSS*PSPESG
Trigger: ACCTGACTCTGGGCTAGGGCATGAACTGGTCCTGGC...ACCATGTGTCTGTGAGGCAGGGAACATGTATTCTCTGCATGCATGTATGTAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCCTCATCAGTGCTGTCTaGCTGGGCCAGGACCAGTTC +
Preference number: 4 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGILISAV*LGQDQF
Trigger: GAACTGGTCCTGGCCCAGGCAGACAGCACTGATGAG...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCGGGCGCAAGATGCTCTaGAAGCTCACATCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGIGRKML*KLTSSR
Trigger: CCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCC...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp AACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCGGTCAGGGCGCAAGATaGTCTGCAAGCTCACATCCA +
Preference number: 4 (lower is better)
Translates to: NFQLRSNHRDLLSCLVSIGQGAR*SASSHP
Trigger: TGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACC...GATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATGCGCCGGACGGTACTaGAAACGGAACTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELCAGRY*KRNLSR
Trigger: CCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCA...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp ACCTACATACATGCATGCAGAGAATACATGTTCCCTGCCTCACAGACACATGGTTGCGCCGGACGGTACTaGAAACGGAACTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TYIHACREYMFPASQTHGCAGRY*KRNLSR
Trigger: CCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCA...ACCATGTGTCTGTGAGGCAGGGAACATGTATTCTCTGCATGCATGTATGTAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTGAAGACCAGGCTGGATGCTaGGCCGGACGGTACTGCAAA +
Preference number: 4 (lower is better)
Translates to: SNSGVKSEVQAPFSCKFEDQAGC*AGRYCK
Trigger: TTTGCAGTACCGTCCGGCGCAGCATCCAGCCTGGTC...TTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTTGGTATGGTCCCAGTaGTCGGAGTTCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGILVWSQ*SEFPRP
Trigger: AGGCCTGGGGAACTCCGAGCACTGGGACCATACCAA...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp AGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCGGCTCCACCTCTGGCTaGGTGTGTAGCTGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: SCKFEIQGLTEMGSKQNFGSTSG*VCSWPH
Trigger: ATGGGGCCAGCTACACACGCAGCCAGAGGTGGAGCC...GAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TTCAGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACGGCTCCACCTCTGGCTaGGTGTGTAGCTGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: FSCKFEIQGLTEMGSKQNGSTSG*VCSWPH
Trigger: ATGGGGCCAGCTACACACGCAGCCAGAGGTGGAGCC...GTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAATTATAGGTGGAATCTaGCGAAGCCCTCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SNHRDLLSCLVSIHTSKTIIGGI*RSPPGS
Trigger: GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAAT...TGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp CCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGATTATAGGTGGAATCTaGCGAAGCCCTCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: PAWFLSTPARQNYRWNLPIIGGI*RSPPGS
Trigger: GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAAT...CGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TGCACCATCCAGGGTCTGGCAGATGTAGGTGCCCTCATCAGTGCTGTCTGCCTGAGGCACCTACATACATaGATGCAGAGAATACATGTT +
Preference number: 4 (lower is better)
Translates to: CTIQGLADVGALISAVCLRHLHT*MQRIHV
Trigger: AACATGTATTCTCTGCATGCATGTATGTAGGTGCCT...CAGGCAGACAGCACTGATGAGGGCACCTACATCTGCCAGACCCTGGATGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555247.5
CDS-3UTR GCA 90 bp TCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACATTGTTCCCACAGCGTTaGCAGGGAAACAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SNHRDLLSCLVSIHTSKTLFPQR*QGNRSR
Trigger: TCTGGACCTGTTTCCCTGGCAACGCTGTGGGAACAA...TGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CCA 90 bp AGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGGGTAAACCGCTGATCTaGCTGGGACTCCAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: RSNHRDLLSCLVSIHTSKGKPLI*LGLQVQ
Trigger: TTGCACTTGGAGTCCCAGCCAGATCAGCGGTTTACC...CTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp AGTTCCAGAATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTGGAGATGAATGTGGTAAACCGCTGATCTaGCTGGGACTCCAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: SSRIRQVQRAVMKGGDECGKPLI*LGLQVQ
Trigger: TTGCACTTGGAGTCCCAGCCAGATCAGCGGTTTACC...ACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCTGATTCTGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp CCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGGATGGACTCCTCCTCTaGCTATCAGCTCCTAGGACT +
Preference number: 4 (lower is better)
Translates to: PAWFLSTPARQNYRWNLPDGLLL*LSAPRT
Trigger: AGTCCTAGGAGCTGATAGCCAGAGGAGGAGTCCATC...CGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TTATTAGTAAAGGGTCAGGAGAGGAATCAGTTAAAATCAAGTGGGGCATGGGGGCCAGGGCCCTGTGGATaGACTCCTCCTCTGGCTATC +
Preference number: 4 (lower is better)
Translates to: LLVKGQERNQLKSSGAWGPGPCG*TPPLAI
Trigger: GATAGCCAGAGGAGGAGTCCATCCACAGGGCCCTGG...CCCCCATGCCCCACTTGATTTTAACTGATTCCTCTCCTGACCCTTTACTAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp AGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGTGCTGGTATCTCCTTTaGTATGGTCCCAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: RSNHRDLLSCLVSIHTSKCWYLL*YGPSAR
Trigger: CCGAGCACTGGGACCATACCAAAGGAGATACCAGCA...CTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp AGAATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTGGAGATGAATGTGGTCTATGCTGGTATCTCCTTTaGTATGGTCCCAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: RIRQVQRAVMKGGDECGLCWYLL*YGPSAR
Trigger: CCGAGCACTGGGACCATACCAAAGGAGATACCAGCA...TAGACCACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCTGATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CCA 90 bp TCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTGAAGGCTGCGTGTGTAGCTaGCCCCATGCTGGTATCTCC +
Preference number: 4 (lower is better)
Translates to: SNSGVKSEVQAPFSCKFEGCVCS*PHAGIS
Trigger: GGAGATACCAGCATGGGGCCAGCTACACACGCAGCC...TTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TTCAGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACAGCCGAGGGTGTGGTTaGAGGGAGGGCCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: FSCKFEIQGLTEMGSKQNSRGCG*REGLGG
Trigger: TCCTCCAAGGCCCTCCCTCCAACCACACCCTCGGCT...GTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCAAGAACCCAGGCTTTaGGGATCCATCCTTCCCACC +
Preference number: 4 (lower is better)
Translates to: AWFLSTPARQNYRWNLPKQEPRL*GSILPT
Trigger: GGTGGGAAGGATGGATCCCCAAAGCCTGGGTTCTTG...CTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCCAGGTTTGGAGCTCCTaGACGCCTGTCCACTGGAAT +
Preference number: 4 (lower is better)
Translates to: WFLSTPARQNYRWNLPKPQVWSS*TPVHWN
Trigger: ATTCCAGTGGACAGGCGTCCAGGAGCTCCAAACCTG...GGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp ACCTACATACATGCATGCAGAGAATACATGTTCCCTGCCTCACAGACACATGGTGGTCCTCTACAGGTTTaGAGCTCCTGGACGCCTGTC +
Preference number: 4 (lower is better)
Translates to: TYIHACREYMFPASQTHGGPLQV*SSWTPV
Trigger: GACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACC...ACCATGTGTCTGTGAGGCAGGGAACATGTATTCTCTGCATGCATGTATGTAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCCTGGAACAGCAGGACTaGAAACAAGAGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: WFLSTPARQNYRWNLPKPLEQQD*KQEPLA
Trigger: GGCCAGTGGCTCTTGTTTCCAGTCCTGCTGTTCCAG...GGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CCA 90 bp TGTGGGTTATCTCAGTCTCCGCCAAAGGGTTTATTAGTAAAGGGTCAGGAGAGGAGGCTGAGGGACCAATaGCAGTCACTTACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: CGLSQSPPKGLLVKGQERRLRDQ*QSLTRA
Trigger: GGCTCTGGTAAGTGACTGCCATTGGTCCCTCAGCCT...CCTCTCCTGACCCTTTACTAATAAACCCTTTGGCGGAGACTGAGATAACCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR TCA 90 bp TCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTGAACAGCCACAGCATCTGTaGTCACCTCCTCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SNSGVKSEVQAPFSCKFEQPQHL*SPPPVQ
Trigger: CTGGACTGGAGGAGGTGATCACAGATGCTGTGGCTG...TTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATCCACAGAGTCCCTGTaGTCAAGTAGCCGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELSTESL*SSSRGC
Trigger: ACACCCTCGGCTACTTGATCACAGGGACTCTGTGGA...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp CTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGAACAGAACTTCCAGCTaGGATCCAACCATAGGGATC +
Preference number: 4 (lower is better)
Translates to: LSTPARQNYRWNLPKPSWNRTSS*DPTIGI
Trigger: GATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTT...CCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp AGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACTCCAACTCTGGGGTaGAATCAGAGGTACAAGCAC +
Preference number: 4 (lower is better)
Translates to: RSNHRDLLSCLVSIHTSKTPTLG*NQRYKH
Trigger: GTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGT...CTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp CAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCATTACACACGTTCCTTaGGCAGAACTCCAACTCTGG +
Preference number: 4 (lower is better)
Translates to: QLRSNHRDLLSCLVSIHTITHVP*AELQLW
Trigger: CCAGAGTTGGAGTTCTGCTCAAGGAACGTGTGTAAT...GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp CCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGATTACACACGTTCCTTaGGCAGAACTCCAACTCTGG +
Preference number: 4 (lower is better)
Translates to: PTIGIYCPAWFLSTPARQITHVP*AELQLW
Trigger: CCAGAGTTGGAGTTCTGCTCAAGGAACGTGTGTAAT...CTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TTATTAGTAAAGGGTCAGGAGAGGAATCAGTTAAAATCAAGTGGGGCATGGGGGACAGCTTCACGGACCTaGCTGGCTGCCCATACTGGA +
Preference number: 4 (lower is better)
Translates to: LLVKGQERNQLKSSGAWGTASRT*LAAHTG
Trigger: TCCAGTATGGGCAGCCAGGCAGGTCCGTGAAGCTGT...CCCCCATGCCCCACTTGATTTTAACTGATTCCTCTCCTGACCCTTTACTAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp TGTGGGTTATCTCAGTCTCCGCCAAAGGGTTTATTAGTAAAGGGTCAGGAGAGGTCTGGCAGATGTAGGTaGCCTCATCAGTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: CGLSQSPPKGLLVKGQERSGRCR*PHQCCL
Trigger: CAGACAGCACTGATGAGGGCACCTACATCTGCCAGA...CCTCTCCTGACCCTTTACTAATAAACCCTTTGGCGGAGACTGAGATAACCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp TGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCCAGCACTGTGCCCCCAAGTaGACCATCCAGGGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: CKFEIQGLTEMGSKQNFQHCAPK*TIQGLA
Trigger: TGCCAGACCCTGGATGGTGCACTTGGGGGCACAGTG...CTGGAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp TGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCCAGCATCCAGCAGGCGTGTaGTGGCACCCAGTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: CKFEIQGLTEMGSKQNFQHPAGV*WHPVGS
Trigger: TGAACCCACTGGGTGCCAGCACACGCCTGCTGGATG...CTGGAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGATCCAGGTGCTCCAGGTaGCAGCATCTAGAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: STVLPGFYPHQQDRIIGGSRCSR*QHLESP
Trigger: GGGACTTTCTAGATGCTGGCACCTGGAGCACCTGGA...TCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTATTATAGGTGGAATCTaGCGAAGCCCTCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: FYPHQQDRIIGGICRSPPIIGGI*RSPPGS
Trigger: GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAAT...AGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAAGGGATCTACTGTCCTaGCTGGTTTCTATCCACACC +
Preference number: 4 (lower is better)
Translates to: SNHRDLLSCLVSIHTSKTRDLLS*LVSIHT
Trigger: GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCT...TGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp AGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGAGGGATCTACTGTCCTaGCTGGTTTCTATCCACACC +
Preference number: 4 (lower is better)
Translates to: RSNHRDLLSCLVSIHTSKRDLLS*LVSIHT
Trigger: GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCT...CTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp CCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAGGGATCTACTGTCCTaGCTGGTTTCTATCCACACC +
Preference number: 4 (lower is better)
Translates to: PAWFLSTPARQNYRWNLPRDLLS*LVSIHT
Trigger: GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCT...CGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp CTCTACAGGTTTGGAGCTCCTGGACGCCTGTCCACTGGAATCACTGAGGCCAAGCAAGCACCTTTCAGCTaGAAATTTGAAATACAGGGT +
Preference number: 4 (lower is better)
Translates to: LYRFGAPGRLSTGITEAKQAPFS*KFEIQG
Trigger: ACCCTGTATTTCAAATTTGCAGCTGAAAGGTGCTTG...CTTGGCCTCAGTGATTCCAGTGGACAGGCGTCCAGGAGCTCCAAACCTGTAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGCTCTTTATTCACACCTaGACAACCCCTGCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: SKQNFQLRSNHRDLLSCLLFIHT*TTPARG
Trigger: TCCCCTTGCAGGGGTTGTGCAGGTGTGAATAAAGAG...CAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp TTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACCTCTTTATTCACACCTaGACAACCCCTGCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: FQLRSNHRDLLSCLVSIHLFIHT*TTPARG
Trigger: TCCCCTTGCAGGGGTTGTGCAGGTGTGAATAAAGAG...GTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR CCA 90 bp GCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGGGTAAACCGCTGATCTaGCTGGGACTCCAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: AWFLSTPARQNYRWNLPKGKPLI*LGLQVQ
Trigger: TTGCACTTGGAGTCCCAGCCAGATCAGCGGTTTACC...CTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp GCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGACATTAATCCGGTACTaGCTCCAGAACTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: AWFLSTPARQNYRWNLPKTLIRY*LQNSAP
Trigger: CGGGGCTGAGTTCTGGAGCCAGTACCGGATTAATGT...CTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACGTATCTCCTTTGGTATaGTCCCAGTGCTCGGAGTTC +
Preference number: 4 (lower is better)
Translates to: FQLRSNHRDLLSCLVSIHVSPLV*SQCSEF
Trigger: GAACTCCGAGCACTGGGACCATACCAAAGGAGATAC...GTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGTATCTCCTTTGGTATaGTCCCAGTGCTCGGAGTTC +
Preference number: 4 (lower is better)
Translates to: SNHRDLLSCLVSIHTSKTVSPLV*SQCSEF
Trigger: GAACTCCGAGCACTGGGACCATACCAAAGGAGATAC...TGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGGTATCTCCTTTGGTATaGTCCCAGTGCTCGGAGTTC +
Preference number: 4 (lower is better)
Translates to: PAWFLSTPARQNYRWNLPVSPLV*SQCSEF
Trigger: GAACTCCGAGCACTGGGACCATACCAAAGGAGATAC...CGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTGCTGGTATCTCCTTTaGTATGGTCCCAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: WFLSTPARQNYRWNLPKPCWYLL*YGPSAR
Trigger: CCGAGCACTGGGACCATACCAAAGGAGATACCAGCA...GGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAGACAGAATTATAGGTaGAATCTGCCGAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PTIGIYCPAWFLSTPARQRQNYR*NLPKPS
Trigger: GGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCT...CTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCTCTCCAACAATGTaGGTTATCTCAGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LSTPARQNYRWNLPKPSWVSPTM*VISVRA
Trigger: GGCTCTGACTGAGATAACCCACATTGTTGGAGAGAC...CCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466082.1
CDS-3UTR CCA 90 bp TCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGCACATGTGAGAGTCTaGAGGAGCCAAGGACACAAA +
Preference number: 4 (lower is better)
Translates to: SKQNFQLRSNHRDLLSCLAHVRV*RSQGHK
Trigger: TTTGTGTCCTTGGCTCCTCCAGACTCTCACATGTGC...CAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CCA 90 bp TCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCTTCGCCTTAAAATTTaGAGGACACCAGTGGCATCA +
Preference number: 4 (lower is better)
Translates to: STPARQNYRWNLPKPSWVLRLKI*RTPVAS
Trigger: TGATGCCACTGGTGTCCTCCAAATTTTAAGGCGAAG...GACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCAGGGAAGAAAAACCCTaGTCTGGAAGGCAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGIREEKP*SGRQAA
Trigger: GGCTGCCTGCCTTCCAGACCAGGGTTTTTCTTCCCT...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CCA 90 bp GATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGATCTACTCCCCAGTCATaGGAAGCTCGAGGGAAATGT +
Preference number: 4 (lower is better)
Translates to: DPTIGIYCPAWFLSTPARSTPQS*EARGKC
Trigger: ACATTTCCCTCGAGCTTCCCATGACTGGGGAGTAGA...TCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CCA 90 bp ATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTGGAGATGAATGTGGTCTATGGTCAGTTAAAATCAAGTaGGGCATGGGGGATGGAGGT +
Preference number: 4 (lower is better)
Translates to: IRQVQRAVMKGGDECGLWSVKIK*GMGDGG
Trigger: ACCTCCATCCCCCATGCCCCACTTGATTTTAACTGA...CCATAGACCACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR TCA 90 bp TCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTGAATCCACAGAGTCCCTGTaGTCAAGTAGCCGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SNSGVKSEVQAPFSCKFESTESL*SSSRGC
Trigger: ACACCCTCGGCTACTTGATCACAGGGACTCTGTGGA...TTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp TCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTGAAGTCCACTGGAATCACTaGGGCCAAGAACCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SNSGVKSEVQAPFSCKFEVHWNH*GQEPRL
Trigger: AAGCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGAC...TTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp CCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCACTCCAACTCTGGGGTaGAATCAGAGGTACAAGCAC +
Preference number: 4 (lower is better)
Translates to: PGFYPHQQDRIIGGICRSTPTLG*NQRYKH
Trigger: GTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGT...GCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp AGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCACAGCTTCACGGACCTaGCTGGCTGCCCATACTGGA +
Preference number: 4 (lower is better)
Translates to: SCKFEIQGLTEMGSKQNFTASRT*LAAHTG
Trigger: TCCAGTATGGGCAGCCAGGCAGGTCCGTGAAGCTGT...GAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGATCTGGCAGATGTAGGTaGCCTCATCAGTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: STVLPGFYPHQQDRIIGGSGRCR*PHQCCL
Trigger: CAGACAGCACTGATGAGGGCACCTACATCTGCCAGA...TCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp AGAATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTGGAGATGAATGTGGTCTAGGCTGGGACTCCAAGTaGAAGAGAAGTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: RIRQVQRAVMKGGDECGLGWDSK*KRSSHS
Trigger: ACTATGAGAACTTCTCTTGCACTTGGAGTCCCAGCC...TAGACCACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCTGATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR GCA 90 bp CCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAGAATACATGTTCCCTaGCTCACAGACACATGGTCA +
Preference number: 4 (lower is better)
Translates to: PTIGIYCPAWFLSTPARQRIHVP*LTDTWS
Trigger: TGACCATGTGTCTGTGAGGCAGGGAACATGTATTCT...CTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCCATTCTGGCCATCCCTaGATCATTCACAATGCCTGC +
Preference number: 4 (lower is better)
Translates to: FLEQNSNSGVKSEVQAPFHSGHP*IIHNAC
Trigger: GCAGGCATTGTGAATGATGCAGGGATGGCCAGAATG...GAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR GCA 90 bp GATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGATGTCGGGTATATGTATaGCTCAAGAAACCAGCCACC +
Preference number: 4 (lower is better)
Translates to: DPTIGIYCPAWFLSTPARCRVYV*LKKPAT
Trigger: GGTGGCTGGTTTCTTGAGGCATACATATACCCGACA...TCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCACATTAATCCGGTACTaGCTCCAGAACTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGITLIRY*LQNSAP
Trigger: CGGGGCTGAGTTCTGGAGCCAGTACCGGATTAATGT...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATGCTGGTATCTCCTTTaGTATGGTCCCAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELCWYLL*YGPSAR
Trigger: CCGAGCACTGGGACCATACCAAAGGAGATACCAGCA...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp AGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCGGTCCTCTACAGGTTTaGAGCTCCTGGACGCCTGTC +
Preference number: 4 (lower is better)
Translates to: SCKFEIQGLTEMGSKQNFGPLQV*SSWTPV
Trigger: GACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACC...GAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAAGACAGAATTATAGGTaGAATCTGCCGAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SNHRDLLSCLVSIHTSKTRQNYR*NLPKPS
Trigger: GGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCT...TGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGAGACAGAATTATAGGTaGAATCTGCCGAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SKQNFQLRSNHRDLLSCLRQNYR*NLPKPS
Trigger: GGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCT...CAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGAAGGCCTATCCACCCTaGAACAGCAGGACTGGAAAC +
Preference number: 4 (lower is better)
Translates to: CPAWFLSTPARQNYRWNLKAYPP*NSRTGN
Trigger: GTTTCCAGTCCTGCTGTTCCAGGGTGGATAGGCCTT...CAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR TCA 90 bp CCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCATTACACACGTTCCTTaGGCAGAACTCCAACTCTGG +
Preference number: 4 (lower is better)
Translates to: PGFYPHQQDRIIGGICRSITHVP*AELQLW
Trigger: CCAGAGTTGGAGTTCTGCTCAAGGAACGTGTGTAAT...GCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp TTCAGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTGTCCAGCCTTAGTGTaGTTTCCCCACCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: FSCKFEIQGLTEMGSKQNCPALV*FPHPQA
Trigger: AGCCTGTGGGTGGGGAAATCACACTAAGGCTGGACA...GTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR GCA 90 bp TCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTGAAGTTCTCATAGTCGGCTaGTTGGCAGGAGACAACAGG +
Preference number: 4 (lower is better)
Translates to: SNSGVKSEVQAPFSCKFEVLIVG*LAGDNR
Trigger: CCTGTTGTCTCCTGCCAAGCAGCCGACTATGAGAAC...TTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TTCAGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACGGTCAGGGCGCAAGATaGTCTGCAAGCTCACATCCA +
Preference number: 4 (lower is better)
Translates to: FSCKFEIQGLTEMGSKQNGQGAR*SASSHP
Trigger: TGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACC...GTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCAAGCACCTTTCAGCTaGAAATTTGAAATACAGGGT +
Preference number: 4 (lower is better)
Translates to: STPARQNYRWNLPKPSWVQAPFS*KFEIQG
Trigger: ACCCTGTATTTCAAATTTGCAGCTGAAAGGTGCTTG...GACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACAGAATACATGTTCCCTaGCTCACAGACACATGGTCA +
Preference number: 4 (lower is better)
Translates to: FQLRSNHRDLLSCLVSIHRIHVP*LTDTWS
Trigger: TGACCATGTGTCTGTGAGGCAGGGAACATGTATTCT...GTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCCTCTTTATTCACACCTaGACAACCCCTGCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGILFIHT*TTPARG
Trigger: TCCCCTTGCAGGGGTTGTGCAGGTGTGAATAAAGAG...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp GATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGAAGCTGTTTCTGTTTGTaGAATGATTGGGGCACAAGG +
Preference number: 4 (lower is better)
Translates to: DPTIGIYCPAWFLSTPARSCFCL*NDWGTR
Trigger: CCTTGTGCCCCAATCATTGCACAAACAGAAACAGCT...TCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CCA 90 bp TCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTGAAGATGGACTCCTCCTCTaGCTATCAGCTCCTAGGACT +
Preference number: 4 (lower is better)
Translates to: SNSGVKSEVQAPFSCKFEDGLLL*LSAPRT
Trigger: AGTCCTAGGAGCTGATAGCCAGAGGAGGAGTCCATC...TTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCGTATCTCCTTTGGTATaGTCCCAGTGCTCGGAGTTC +
Preference number: 4 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGIVSPLV*SQCSEF
Trigger: GAACTCCGAGCACTGGGACCATACCAAAGGAGATAC...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTGAATGCTGGTATCTCCTTTaGTATGGTCCCAGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: SNSGVKSEVQAPFSCKFECWYLL*YGPSAR
Trigger: CCGAGCACTGGGACCATACCAAAGGAGATACCAGCA...TTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp AGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCCAAGAACCCAGGCTTTaGGGATCCATCCTTCCCACC +
Preference number: 4 (lower is better)
Translates to: SCKFEIQGLTEMGSKQNFQEPRL*GSILPT
Trigger: GGTGGGAAGGATGGATCCCCAAAGCCTGGGTTCTTG...GAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TTCAGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACCAGGTTTGGAGCTCCTaGACGCCTGTCCACTGGAAT +
Preference number: 4 (lower is better)
Translates to: FSCKFEIQGLTEMGSKQNQVWSS*TPVHWN
Trigger: ATTCCAGTGGACAGGCGTCCAGGAGCTCCAAACCTG...GTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCCAGCAGGTTTGGAGCTCCTaGACGCCTGTCCACTGGAAT +
Preference number: 4 (lower is better)
Translates to: CKFEIQGLTEMGSKQNFQQVWSS*TPVHWN
Trigger: ATTCCAGTGGACAGGCGTCCAGGAGCTCCAAACCTG...CTGGAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp AGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCCAGGTTTGGAGCTCCTaGACGCCTGTCCACTGGAAT +
Preference number: 4 (lower is better)
Translates to: SCKFEIQGLTEMGSKQNFQVWSS*TPVHWN
Trigger: ATTCCAGTGGACAGGCGTCCAGGAGCTCCAAACCTG...GAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTAGACAGAATTATAGGTaGAATCTGCCGAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: FYPHQQDRIIGGICRSPPRQNYR*NLPKPS
Trigger: GGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCT...AGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCATCTACTGTCCTGCCTaGTTTCTATCCACACCAGCA +
Preference number: 4 (lower is better)
Translates to: WFLSTPARQNYRWNLPKPIYCPA*FLSTPA
Trigger: TGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGAT...GGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp AACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCATCTACTGTCCTGCCTaGTTTCTATCCACACCAGCA +
Preference number: 4 (lower is better)
Translates to: NFQLRSNHRDLLSCLVSIIYCPA*FLSTPA
Trigger: TGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGAT...GATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGTTTGGAGGACACCAGTaGCATCAGGTCTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: CPAWFLSTPARQNYRWNLFGGHQ*HQVSCV
Trigger: AACACAGGAGACCTGATGCCACTGGTGTCCTCCAAA...CAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CCA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTACAGCCAAGTTTCTCCTaGGCCAGATTCAGTCACTGT +
Preference number: 4 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELQPSFS*ARFSHC
Trigger: ACAGTGACTGAATCTGGCCCAGGAGAAACTTGGCTG...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR TCA 90 bp TGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGAACAGAACTTCCAGCTaGGATCCAACCATAGGGATC +
Preference number: 4 (lower is better)
Translates to: CPAWFLSTPARQNYRWNLNRTSS*DPTIGI
Trigger: GATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTT...CAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp GGCTCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCTTTCAGCTGCAAATTTaGAATACAGGGTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: GSKQNFQLRSNHRDLLSCFQLQI*NTGSHR
Trigger: TCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAAA...GCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCCAGTCTGGCAGATGTAGGTaGCCTCATCAGTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: CKFEIQGLTEMGSKQNFQSGRCR*PHQCCL
Trigger: CAGACAGCACTGATGAGGGCACCTACATCTGCCAGA...CTGGAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
CDS-3UTR GCA 90 bp TTCAGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACGTTCTCATAGTCGGCTaGTTGGCAGGAGACAACAGG +
Preference number: 4 (lower is better)
Translates to: FSCKFEIQGLTEMGSKQNVLIVG*LAGDNR
Trigger: CCTGTTGTCTCCTGCCAAGCAGCCGACTATGAGAAC...GTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGGGCTGGGACTCCAAGTaGAAGAGAAGTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: CPAWFLSTPARQNYRWNLGWDSK*KRSSHS
Trigger: ACTATGAGAACTTCTCTTGCACTTGGAGTCCCAGCC...CAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAGGCTGGGACTCCAAGTaGAAGAGAAGTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: STVLPGFYPHQQDRIIGGGWDSK*KRSSHS
Trigger: ACTATGAGAACTTCTCTTGCACTTGGAGTCCCAGCC...TCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTAGGCTGGGACTCCAAGTaGAAGAGAAGTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELGWDSK*KRSSHS
Trigger: ACTATGAGAACTTCTCTTGCACTTGGAGTCCCAGCC...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCCAGATTATAGGTGGAATCTaGCGAAGCCCTCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: CKFEIQGLTEMGSKQNFQIIGGI*RSPPGS
Trigger: GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAAT...CTGGAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp AGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCATTATAGGTGGAATCTaGCGAAGCCCTCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SCKFEIQGLTEMGSKQNFIIGGI*RSPPGS
Trigger: GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAAT...GAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp CAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCCAAGCACCTTTCAGCTaGAAATTTGAAATACAGGGT +
Preference number: 4 (lower is better)
Translates to: QLRSNHRDLLSCLVSIHTQAPFS*KFEIQG
Trigger: ACCCTGTATTTCAAATTTGCAGCTGAAAGGTGCTTG...GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp CCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGCAAGCACCTTTCAGCTaGAAATTTGAAATACAGGGT +
Preference number: 4 (lower is better)
Translates to: PTIGIYCPAWFLSTPARQQAPFS*KFEIQG
Trigger: ACCCTGTATTTCAAATTTGCAGCTGAAAGGTGCTTG...CTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGATCAGGTCTCCTGTGTTaGATAGACTGTTGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: STVLPGFYPHQQDRIIGGSGLLC*IDCCSH
Trigger: GTGGGAACAACAGTCTATGCAACACAGGAGACCTGA...TCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CCA 90 bp AGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCACATTAATCCGGTACTaGCTCCAGAACTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SCKFEIQGLTEMGSKQNFTLIRY*LQNSAP
Trigger: CGGGGCTGAGTTCTGGAGCCAGTACCGGATTAATGT...GAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp TTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACTTTCAGCTGCAAATTTaGAATACAGGGTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: FQLRSNHRDLLSCLVSIHFQLQI*NTGSHR
Trigger: TCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAAA...GTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp CCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGTTTCAGCTGCAAATTTaGAATACAGGGTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: PAWFLSTPARQNYRWNLPFQLQI*NTGSHR
Trigger: TCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAAA...CGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp TCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTGAAATTACACACGTTCCTTaGGCAGAACTCCAACTCTGG +
Preference number: 4 (lower is better)
Translates to: SNSGVKSEVQAPFSCKFEITHVP*AELQLW
Trigger: CCAGAGTTGGAGTTCTGCTCAAGGAACGTGTGTAAT...TTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR TCA 90 bp TGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCCAGTTTCTGTTTGTGCAATaGTTGGGGCACAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: CKFEIQGLTEMGSKQNFQFLFVQ*LGHKGS
Trigger: GCTGCCCTTGTGCCCCAATCATTGCACAAACAGAAA...CTGGAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR GCA 90 bp AGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCAGGGATCTACTGTCCTaGCTGGTTTCTATCCACACC +
Preference number: 4 (lower is better)
Translates to: SCKFEIQGLTEMGSKQNFRDLLS*LVSIHT
Trigger: GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCT...GAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGAGAATACATGTTCCCTaGCTCACAGACACATGGTCA +
Preference number: 4 (lower is better)
Translates to: CPAWFLSTPARQNYRWNLRIHVP*LTDTWS
Trigger: TGACCATGTGTCTGTGAGGCAGGGAACATGTATTCT...CAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAAGAATACATGTTCCCTaGCTCACAGACACATGGTCA +
Preference number: 4 (lower is better)
Translates to: STVLPGFYPHQQDRIIGGRIHVP*LTDTWS
Trigger: TGACCATGTGTCTGTGAGGCAGGGAACATGTATTCT...TCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp AGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGAGGCACCTACATACATaGATGCAGAGAATACATGTT +
Preference number: 4 (lower is better)
Translates to: RSNHRDLLSCLVSIHTSKRHLHT*MQRIHV
Trigger: AACATGTATTCTCTGCATGCATGTATGTAGGTGCCT...CTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp GATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGAAGGCACCTACATACATaGATGCAGAGAATACATGTT +
Preference number: 4 (lower is better)
Translates to: DPTIGIYCPAWFLSTPARRHLHT*MQRIHV
Trigger: AACATGTATTCTCTGCATGCATGTATGTAGGTGCCT...TCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TTCAGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACGTATCTCCTTTGGTATaGTCCCAGTGCTCGGAGTTC +
Preference number: 4 (lower is better)
Translates to: FSCKFEIQGLTEMGSKQNVSPLV*SQCSEF
Trigger: GAACTCCGAGCACTGGGACCATACCAAAGGAGATAC...GTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp TCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTGAAAGACAGAATTATAGGTaGAATCTGCCGAAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SNSGVKSEVQAPFSCKFERQNYR*NLPKPS
Trigger: GGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCT...TTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCAGGCAAAAACCATTCTaGCCATCCCTGCATCATTCA +
Preference number: 4 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGIRQKPF*PSLHHS
Trigger: TGAATGATGCAGGGATGGCCAGAATGGTTTTTGCCT...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CCA 90 bp CAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCCTTTGCTGGATATTGTaGTTTGAAAACTGCAAAACC +
Preference number: 4 (lower is better)
Translates to: QLRSNHRDLLSCLVSIHTLCWIL*FENCKT
Trigger: GGTTTTGCAGTTTTCAAACCACAATATCCAGCAAAG...GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR TCA 90 bp TCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTGAACTGGATATTGTGGTTTaGAAACTGCAAAACCCCACC +
Preference number: 4 (lower is better)
Translates to: SNSGVKSEVQAPFSCKFELDIVV*KLQNPT
Trigger: GGTGGGGTTTTGCAGTTTTCAAACCACAATATCCAG...TTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR GCA 90 bp AGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCGGCTGGGACTCCAAGTaGAAGAGAAGTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: SCKFEIQGLTEMGSKQNFGWDSK*KRSSHS
Trigger: ACTATGAGAACTTCTCTTGCACTTGGAGTCCCAGCC...GAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TTCAGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACGGCTGGGACTCCAAGTaGAAGAGAAGTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: FSCKFEIQGLTEMGSKQNGWDSK*KRSSHS
Trigger: ACTATGAGAACTTCTCTTGCACTTGGAGTCCCAGCC...GTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTAGGCACCTACATACATaGATGCAGAGAATACATGTT +
Preference number: 4 (lower is better)
Translates to: FYPHQQDRIIGGICRSPPRHLHT*MQRIHV
Trigger: AACATGTATTCTCTGCATGCATGTATGTAGGTGCCT...AGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp AACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCAGATGATTCCAAAATaGAGCCAAATCAGAGGTGTA +
Preference number: 4 (lower is better)
Translates to: NFQLRSNHRDLLSCLVSIQMIPK*SQIRGV
Trigger: TACACCTCTGATTTGGCTGCATTTTGGAATCATCTG...GATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR TCA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTTTCAGCTGCAAATTTaGAATACAGGGTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGIFQLQI*NTGSHR
Trigger: TCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAAA...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp ACCTACATACATGCATGCAGAGAATACATGTTCCCTGCCTCACAGACACATGGTAGGCACCTACATACATaGATGCAGAGAATACATGTT +
Preference number: 4 (lower is better)
Translates to: TYIHACREYMFPASQTHGRHLHT*MQRIHV
Trigger: AACATGTATTCTCTGCATGCATGTATGTAGGTGCCT...ACCATGTGTCTGTGAGGCAGGGAACATGTATTCTCTGCATGCATGTATGTAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCTCGAGGGAAATGTGTaGATACTATGTCTATCAGAT +
Preference number: 4 (lower is better)
Translates to: CPAWFLSTPARQNYRWNLLEGNV*ILCLSD
Trigger: ATCTGATAGACATAGTATGCACACATTTCCCTCGAG...CAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR GCA 90 bp GCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGGTGGTTCTCAAACTTTaGTGGATATTGTGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: AWFLSTPARQNYRWNLPKVVLKL*WILWFE
Trigger: TTCAAACCACAATATCCAGCAAAGTTTGAGAACCAC...CTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR TCA 90 bp ACCTACATACATGCATGCAGAGAATACATGTTCCCTGCCTCACAGACACATGGTTTAAAACTTCCCAGATaGTTCCAAAATGCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: TYIHACREYMFPASQTHGLKLPR*FQNAAK
Trigger: TTTGGCTGCATTTTGGAATCATCTGGGAAGTTTTAA...ACCATGTGTCTGTGAGGCAGGGAACATGTATTCTCTGCATGCATGTATGTAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR TCA 90 bp TTCAGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTTCAGCTGCAAATTTaGAATACAGGGTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: FSCKFEIQGLTEMGSKQNFQLQI*NTGSHR
Trigger: TCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAAA...GTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR GCA 90 bp TTCAGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACATCATTCACAATGCCTaGCTTCGCCTTAAAATTTGG +
Preference number: 4 (lower is better)
Translates to: FSCKFEIQGLTEMGSKQNIIHNA*LRLKIW
Trigger: CCAAATTTTAAGGCGAAGGCAGGCATTGTGAATGAT...GTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CCA 90 bp AGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCGTTCTCAAACTTTGCTaGATATTGTGGTTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: SCKFEIQGLTEMGSKQNFVLKLC*ILWFEN
Trigger: GTTTTCAAACCACAATATCCAGCAAAGTTTGAGAAC...GAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS TCA 90 bp AGACACCAGGGCTGTAGCCACGGCCACCAGGACCCTGCTCAGCCCTaGGCAGCTGCTGCTCATCTTCCGCGGCCGCTGCCGCCAGCGCCC +
Preference number: 5 (lower is better)
Translates to: RHQGCSHGHQDPAQP*AAAAHLPRPLPPAP
Trigger: GGGCGCTGGCGGCAGCGGCCGCGGAAGATGAGCAGCAGCTGCTCAGGGCTGAGCAGGGTCCTGGTGGCCGTGGCTACAGCCCTGGTGTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441545.7
ENST00000553620.5
ENST00000555247.5
CDS TCA 90 bp AGACACCAGGGCTGTAGCCACGGCCACCAGGACCCTGCTCAGCCCTaGGCAGCTGCTGCTCATCTCCACCCCCACCTCCGCCGGACACTT +
Preference number: 5 (lower is better)
Translates to: RHQGCSHGHQDPAQP*AAAAHLHPHLRRTL
Trigger: AAGTGTCCGGCGGAGGTGGGGGTGGAGATGAGCAGCAGCTGCTCAGGGCTGAGCAGGGTCCTGGTGGCCGTGGCTACAGCCCTGGTGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS GCA 90 bp CTGGGTCCCCGGCAGTCACTCCAGGACAACACAGCTTCACGGACCTaGCTGGCTGCCCATACTGGACCCCTGTGGAGGGCACTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: LGPRQSLQDNTASRT*LAAHTGPLWRALLR
Trigger: CCTCAGAAGTGCCCTCCACAGGGGTCCAGTATGGGCAGCCAGGCAGGTCCGTGAAGCTGTGTTGTCCTGGAGTGACTGCCGGGGACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478308.1
ENST00000553969.1
CDS CCA 90 bp GCCTGGGCCAGGACCAGTTCATGCCCTAGCCCAGAGTCAGGTCCCTaGAGCAGCTTTGGCTCCCCATCCCGAAACCAGGACACTGGGTCC +
Preference number: 5 (lower is better)
Translates to: AWARTSSCPSPESGP*SSFGSPSRNQDTGS
Trigger: GGACCCAGTGTCCTGGTTTCGGGATGGGGAGCCAAAGCTGCTCCAGGGACCTGACTCTGGGCTAGGGCATGAACTGGTCCTGGCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000478802.2
ENST00000553969.1
ENST00000555003.5
ENST00000555247.5
ENST00000555981.5
ENST00000556531.5
ENST00000556792.5
ENST00000602473.5
CDS CCA 90 bp CTCCGCCGGACACTTCCTGTCCCGTCCCGGACTGAAGAGGCTGCTTaGGACAGAGTCTGGAGCTGGATTCCTGGGTCTCCGCCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: LRRTLPVPSRTEEAA*DRVWSWIPGSPPEG
Trigger: GCCTTCAGGCGGAGACCCAGGAATCCAGCTCCAGACTCTGTCCCAAGCAGCCTCTTCAGTCCGGGACGGGACAGGAAGTGTCCGGCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CAA 90 bp CGGTACTGGCTCCAGAACTCAGCCCCGTGGACAACACAGCGGGCAGCCCCTAGGCTCATAGTCGGCTGCTaGGCAGGAGACAACAGGGCG +
Preference number: 5 (lower is better)
Translates to: RYWLQNSAPWTTQRAAPRLIVGC*AGDNRA
Trigger: CGCCCTGTTGTCTCCTGCCAAGCAGCCGACTATGAG...CCTAGGGGCTGCCCGCTGTGTTGTCCACGGGGCTGAGTTCTGGAGCCAGTACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS GCA 90 bp CCGGCAGTCACTCCAGGACAACACAGCTTCACGGACCTGCCTGGCTaGCCATACTGGACCCCTGTGGAGGGCACTTCTGAGGTAAGGCTC +
Preference number: 5 (lower is better)
Translates to: PAVTPGQHSFTDLPG*PYWTPVEGTSEVRL
Trigger: GAGCCTTACCTCAGAAGTGCCCTCCACAGGGGTCCAGTATGGGCAGCCAGGCAGGTCCGTGAAGCTGTGTTGTCCTGGAGTGACTGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478308.1
ENST00000553969.1
CDS GCA 90 bp CCTCCCCAACTCACAGCCCAGCTGCAGGGTCACTGTGCCCCCAAGTaGACCATCCAGGGTCTGGCAGATGTAGGTGCCCTCATCAGTGCT +
Preference number: 5 (lower is better)
Translates to: PPQLTAQLQGHCAPK*TIQGLADVGALISA
Trigger: AGCACTGATGAGGGCACCTACATCTGCCAGACCCTGGATGGTGCACTTGGGGGCACAGTGACCCTGCAGCTGGGCTGTGAGTTGGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553969.1
CDS-3UTR CAA 90 bp CTCCACCGTGGACCAGGCTGGATGCTGCGCCGGACGGTACTGCAAACGGAACTTGGGTCCTCTACAGGTTaGGAGCTCCTGGACGCCTGT +
Preference number: 5 (lower is better)
Translates to: LHRGPGWMLRRTVLQTELGSSTG*ELLDAC
Trigger: ACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCC...AAGTTCCGTTTGCAGTACCGTCCGGCGCAGCATCCAGCCTGGTCCACGGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp CCTGGGGTGGGTCAGGGCGCAAGATGCTCTGCAAGCTCACATCCAGCAGGCGTGTACTGCAAACGGAACTaGAGCAGGAAGTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PGVGQGARCSASSHPAGVYCKRN*SRKWGW
Trigger: CCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTA...CACGCCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACCCACCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS TCA 90 bp AGACACCAGGGCTGTAGCCACGGCCACCAGGACCCTGCTCAGCCCTaGGCAGCTGCTGCTCATCTGTGGGGAGAGGTAGAGTCAAAAATC +
Preference number: 5 (lower is better)
Translates to: RHQGCSHGHQDPAQP*AAAAHLWGEVESKI
Trigger: GATTTTTGACTCTACCTCTCCCCACAGATGAGCAGCAGCTGCTCAGGGCTGAGCAGGGTCCTGGTGGCCGTGGCTACAGCCCTGGTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555579.1
ENST00000555981.5
CDS GCA 90 bp CAAGTGCACCATCCAGGGTCTGGCAGATGTAGGTGCCCTCATCAGTaGTGTCTGCCTGGGCCAGGACCAGTTCATGCCCTAGCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: QVHHPGSGRCRCPHQ*CLPGPGPVHALAQS
Trigger: ACTCTGGGCTAGGGCATGAACTGGTCCTGGCCCAGGCAGACAGCACTGATGAGGGCACCTACATCTGCCAGACCCTGGATGGTGCACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000478802.2
ENST00000553969.1
ENST00000555003.5
ENST00000555247.5
ENST00000555981.5
ENST00000556531.5
ENST00000556792.5
ENST00000602473.5
CDS GCA 90 bp GATCTGGCTGGGACTCCAAGTGCAAGAGAAGTTCTCATAGTCGGCTaGTTGGCAGGAGACAACAGGGCGGGCTGGAGGGTCCGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: DLAGTPSAREVLIVG*LAGDNRAGWRVRQS
Trigger: TGACTGCCGGACCCTCCAGCCCGCCCTGTTGTCTCCTGCCAAGCAGCCGACTATGAGAACTTCTCTTGCACTTGGAGTCCCAGCCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557298.5
CDS CCA 90 bp TCTGGAGCTGGATTCCTGGGTCTCCGCCTGAAGGCCTATCCACCCTaGAACAGCAGGACTGGAAACAAGAGCCACTGGCCAGGTGATTGG +
Preference number: 5 (lower is better)
Translates to: SGAGFLGLRLKAYPP*NSRTGNKSHWPGDW
Trigger: CCAATCACCTGGCCAGTGGCTCTTGTTTCCAGTCCTGCTGTTCCAGGGTGGATAGGCCTTCAGGCGGAGACCCAGGAATCCAGCTCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CAA 90 bp GTGGGTCAGGGCGCAAGATGCTCTGCAAGCTCACATCCAGCAGGCGTGTGCTGGATGCTGGTATCTCCTTaGGTATGGTCCCAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: VGQGARCSASSHPAGVCWMLVSP*VWSQCS
Trigger: CGAGCACTGGGACCATACCAAAGGAGATACCAGCAT...CCAGCACACGCCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS CCA 90 bp ACTCCAGGACAACACAGCTTCACGGACCTGCCTGGCTGCCCATACTaGACCCCTGTGGAGGGCACTTCTGAGGTAAGGCTCTTCCTTTAC +
Preference number: 5 (lower is better)
Translates to: TPGQHSFTDLPGCPY*TPVEGTSEVRLFLY
Trigger: GTAAAGGAAGAGCCTTACCTCAGAAGTGCCCTCCACAGGGGTCCAGTATGGGCAGCCAGGCAGGTCCGTGAAGCTGTGTTGTCCTGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478308.1
ENST00000553969.1
CDS-3UTR CAA 90 bp CCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCGGGTCCTCTACAGGTTaGGAGCTCCTGGACGCCTGT +
Preference number: 5 (lower is better)
Translates to: PHQQDRIIGGICRSPPGSGSSTG*ELLDAC
Trigger: ACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCC...GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS CCA 90 bp AGGCAGAGTCAAGAAAGGGTCATGAGTGTCAGACCAACAGGCAGGTaGGGCACTTACCCGGCAGTCACTCCAGGACAACACAGCTTCACG +
Preference number: 5 (lower is better)
Translates to: RQSQERVMSVRPTGR*GTYPAVTPGQHSFT
Trigger: CGTGAAGCTGTGTTGTCCTGGAGTGACTGCCGGGTAAGTGCCCCACCTGCCTGTTGGTCTGACACTCATGACCCTTTCTTGACTCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555579.1
CDS-3UTR CAA 90 bp AAAGAAAGGATTCCCAAAGACGCCAGCACAGCTACCTGCTCCACAGAGTCCCTGCTCATAGTCGGCTGCTaGGCAGGAGACAACAGGGCG +
Preference number: 5 (lower is better)
Translates to: KERIPKDASTATCSTESLLIVGC*AGDNRA
Trigger: CGCCCTGTTGTCTCCTGCCAAGCAGCCGACTATGAG...CAGGGACTCTGTGGAGCAGGTAGCTGTGCTGGCGTCTTTGGGAATCCTTTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp GTGGACCAGGCTGGATGCTGCGCCGGACGGTACTGCAAACGGAACTTGAGCAGGCATTACACACGTTCCTaGAGCAGAACTCCAACTCTG +
Preference number: 5 (lower is better)
Translates to: VDQAGCCAGRYCKRNLSRHYTRS*SRTPTL
Trigger: CAGAGTTGGAGTTCTGCTCAAGGAACGTGTGTAATG...CCTGCTCAAGTTCCGTTTGCAGTACCGTCCGGCGCAGCATCCAGCCTGGTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp GGCTCCAAACAGAACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCGGGTCCTCTACAGGTTaGGAGCTCCTGGACGCCTGT +
Preference number: 5 (lower is better)
Translates to: GSKQNFQLRSNHRDLLSCGSSTG*ELLDAC
Trigger: ACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCC...GCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTTCTGTTTGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp CCTGGGGTGGGTCAGGGCGCAAGATGCTCTGCAAGCTCACATCCAGCAGGCGTGCTTTCAGCTGCAAATTaGAAATACAGGGTCTCACAG +
Preference number: 5 (lower is better)
Translates to: PGVGQGARCSASSHPAGVLSAAN*KYRVSQ
Trigger: CTGTGAGACCCTGTATTTCAAATTTGCAGCTGAAAG...CACGCCTGCTGGATGTGAGCTTGCAGAGCATCTTGCGCCCTGACCCACCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp CCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCTCCTGGGTCCATGCTGGTATCTCCTTaGGTATGGTCCCAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: PHQQDRIIGGICRSPPGSMLVSP*VWSQCS
Trigger: CGAGCACTGGGACCATACCAAAGGAGATACCAGCAT...GGACCCAGGAGGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS TCA 90 bp TCCACCCTGGAACAGCAGGACTGGAAACAAGAGCCACTGGCCAGGTaGTTGGAGAAGCTGAAGGTGCCCCTGACTCCAGATAAGATAAAG +
Preference number: 5 (lower is better)
Translates to: STLEQQDWKQEPLAR*LEKLKVPLTPDKIK
Trigger: CTTTATCTTATCTGGAGTCAGGGGCACCTTCAGCTTCTCCAATCACCTGGCCAGTGGCTCTTGTTTCCAGTCCTGCTGTTCCAGGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CAA 90 bp TTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCCTCATAGTCGGCTGCTaGGCAGGAGACAACAGGGCG +
Preference number: 5 (lower is better)
Translates to: FLEQNSNSGVKSEVQAPFLIVGC*AGDNRA
Trigger: CGCCCTGTTGTCTCCTGCCAAGCAGCCGACTATGAG...GAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp GCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCTCATAGTCGGCTGCTaGGCAGGAGACAACAGGGCG +
Preference number: 5 (lower is better)
Translates to: AWFLSTPARQNYRWNLPKLIVGC*AGDNRA
Trigger: CGCCCTGTTGTCTCCTGCCAAGCAGCCGACTATGAG...CTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp ATCAGACAGGTTCAGCGGGCAGTCATGAAGGGTGGAGATGAATGTGGTCTATGGTACTGCAAACGGAACTaGAGCAGGAAGTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: IRQVQRAVMKGGDECGLWYCKRN*SRKWGW
Trigger: CCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTA...CCATAGACCACATTCATCTCCACCCTTCATGACTGCCCGCTGAACCTGTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CAA 90 bp CCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCGGGTCCTCTACAGGTTaGGAGCTCCTGGACGCCTGT +
Preference number: 5 (lower is better)
Translates to: PGFYPHQQDRIIGGICRSGSSTG*ELLDAC
Trigger: ACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCC...GCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS TCA 90 bp ATGAAGGGTGGAGATGAATGTGGTCTATGGGCATCAGAGCATGTGTaGGGATCAGAGGCTGAGGGACCAATGGCAGTCACTTACCAGAGC +
Preference number: 5 (lower is better)
Translates to: MKGGDECGLWASEHV*GSEAEGPMAVTYQS
Trigger: GCTCTGGTAAGTGACTGCCATTGGTCCCTCAGCCTCTGATCCTCACACATGCTCTGATGCCCATAGACCACATTCATCTCCACCCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS GCA 90 bp CGCCTTAAAATTTGGAGGACACCAGTGGCATCAGGTCTCCTGTGTTaGATAGACTGTTGTTCCCACAGCGTTGCCAGGGAAACAGGTCCA +
Preference number: 5 (lower is better)
Translates to: RLKIWRTPVASGLLC*IDCCSHSVARETGP
Trigger: TGGACCTGTTTCCCTGGCAACGCTGTGGGAACAACAGTCTATGCAACACAGGAGACCTGATGCCACTGGTGTCCTCCAAATTTTAAGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CAA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCCTCATAGTCGGCTGCTaGGCAGGAGACAACAGGGCG +
Preference number: 5 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGILIVGC*AGDNRA
Trigger: CGCCCTGTTGTCTCCTGCCAAGCAGCCGACTATGAG...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp CAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCATGCTGGTATCTCCTTaGGTATGGTCCCAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: QLRSNHRDLLSCLVSIHTMLVSP*VWSQCS
Trigger: CGAGCACTGGGACCATACCAAAGGAGATACCAGCAT...GGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp TCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAGGGTCCTCTACAGGTTaGGAGCTCCTGGACGCCTGT +
Preference number: 5 (lower is better)
Translates to: STVLPGFYPHQQDRIIGGGSSTG*ELLDAC
Trigger: ACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCC...TCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp TTGGAGCTCCTGGACGCCTGTCCACTGGAATCACTGAGGCCAAGAACCCAGGCTCTTTCAGCTGCAAATTaGAAATACAGGGTCTCACAG +
Preference number: 5 (lower is better)
Translates to: LELLDACPLESLRPRTQALSAAN*KYRVSQ
Trigger: CTGTGAGACCCTGTATTTCAAATTTGCAGCTGAAAG...AGCCTGGGTTCTTGGCCTCAGTGATTCCAGTGGACAGGCGTCCAGGAGCTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp AACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCGTTGTTCCCACAGCGTaGCCAGGGAAACAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: NFQLRSNHRDLLSCLVSIVVPTA*PGKQVQ
Trigger: CTGGACCTGTTTCCCTGGCAACGCTGTGGGAACAAC...GATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS GCA 90 bp GGTTCTCATCTACTCCCCAGTCATGGGAAGCTCGAGGGAAATGTGTaGATACTATGTCTATCAGATCTTCCAGACCAGGGCAACACTCCC +
Preference number: 5 (lower is better)
Translates to: GSHLLPSHGKLEGNV*ILCLSDLPDQGNTP
Trigger: GGGAGTGTTGCCCTGGTCTGGAAGATCTGATAGACATAGTATGCACACATTTCCCTCGAGCTTCCCATGACTGGGGAGTAGATGAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS CCA 90 bp GGCCATCCCTGCATCATTCACAATGCCTGCCTTCGCCTTAAAATTTaGAGGACACCAGTGGCATCAGGTCTCCTGTGTTGCATAGACTGT +
Preference number: 5 (lower is better)
Translates to: GHPCIIHNACLRLKI*RTPVASGLLCCIDC
Trigger: ACAGTCTATGCAACACAGGAGACCTGATGCCACTGGTGTCCTCCAAATTTTAAGGCGAAGGCAGGCATTGTGAATGATGCAGGGATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CAA 90 bp GATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGAGTGTTGCATAGACTGTaGTTCCCACAGCGTTGCCAG +
Preference number: 5 (lower is better)
Translates to: DPTIGIYCPAWFLSTPARVLHRL*FPQRCQ
Trigger: CTGGCAACGCTGTGGGAACAACAGTCTATGCAACAC...TCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS GCA 90 bp GAAGGCAAAAACCATTCTGGCCATCCCTGCATCATTCACAATGCCTaGCTTCGCCTTAAAATTTGGAGGACACCAGTGGCATCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: EGKNHSGHPCIIHNA*LRLKIWRTPVASGL
Trigger: GAGACCTGATGCCACTGGTGTCCTCCAAATTTTAAGGCGAAGGCAGGCATTGTGAATGATGCAGGGATGGCCAGAATGGTTTTTGCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CAA 90 bp TCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGATACTGCAAACGGAACTaGAGCAGGAAGTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: STVLPGFYPHQQDRIIGGYCKRN*SRKWGW
Trigger: CCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTA...TCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp ACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTACTGCAAACGGAACTaGAGCAGGAAGTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TVLPGFYPHQQDRIIGGIYCKRN*SRKWGW
Trigger: CCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTA...GATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp AACTTCCAGCTGAGATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCATGCTGGTATCTCCTTaGGTATGGTCCCAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: NFQLRSNHRDLLSCLVSIMLVSP*VWSQCS
Trigger: CGAGCACTGGGACCATACCAAAGGAGATACCAGCAT...GATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATCTCAGCTGGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp TGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGAATCTGCCGAAGCCCATGCTGGTATCTCCTTaGGTATGGTCCCAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: WFLSTPARQNYRWNLPKPMLVSP*VWSQCS
Trigger: CGAGCACTGGGACCATACCAAAGGAGATACCAGCAT...GGGCTTCGGCAGATTCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp AGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCGGGTCCTCTACAGGTTaGGAGCTCCTGGACGCCTGT +
Preference number: 5 (lower is better)
Translates to: SCKFEIQGLTEMGSKQNFGSSTG*ELLDAC
Trigger: ACAGGCGTCCAGGAGCTCCAAACCTGTAGAGGACCC...GAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000466082.1
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp CCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGCATTACACACGTTCCTaGAGCAGAACTCCAACTCTG +
Preference number: 5 (lower is better)
Translates to: PTIGIYCPAWFLSTPARQHYTRS*SRTPTL
Trigger: CAGAGTTGGAGTTCTGCTCAAGGAACGTGTGTAATG...CTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS CCA 90 bp AAGAAACCAGCCACCCACTCAGGGTTCTCATCTACTCCCCAGTCATaGGAAGCTCGAGGGAAATGTGTGCATACTATGTCTATCAGATCT +
Preference number: 5 (lower is better)
Translates to: KKPATHSGFSSTPQS*EARGKCVHTMSIRS
Trigger: AGATCTGATAGACATAGTATGCACACATTTCCCTCGAGCTTCCCATGACTGGGGAGTAGATGAGAACCCTGAGTGGGTGGCTGGTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS-3UTR CAA 90 bp TCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACACATTACACACGTTCCTaGAGCAGAACTCCAACTCTG +
Preference number: 5 (lower is better)
Translates to: SNHRDLLSCLVSIHTSKTHYTRS*SRTPTL
Trigger: CAGAGTTGGAGTTCTGCTCAAGGAACGTGTGTAATG...TGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp TGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTTCCAGTACTGCAAACGGAACTaGAGCAGGAAGTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: CKFEIQGLTEMGSKQNFQYCKRN*SRKWGW
Trigger: CCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTA...CTGGAAGTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp TTCAGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACTACTGCAAACGGAACTaGAGCAGGAAGTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: FSCKFEIQGLTEMGSKQNYCKRN*SRKWGW
Trigger: CCAGCCCCACTTCCTGCTCAAGTTCCGTTTGCAGTA...GTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp TCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCAGCTGCAAATTTGAAATGCTGGTATCTCCTTaGGTATGGTCCCAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: SNSGVKSEVQAPFSCKFEMLVSP*VWSQCS
Trigger: CGAGCACTGGGACCATACCAAAGGAGATACCAGCAT...TTCAAATTTGCAGCTGAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp TTCCTTGAGCAGAACTCCAACTCTGGGGTGAAATCAGAGGTACAAGCACCTTTCCATTACACACGTTCCTaGAGCAGAACTCCAACTCTG +
Preference number: 5 (lower is better)
Translates to: FLEQNSNSGVKSEVQAPFHYTRS*SRTPTL
Trigger: CAGAGTTGGAGTTCTGCTCAAGGAACGTGTGTAATG...GAAAGGTGCTTGTACCTCTGATTTCACCCCAGAGTTGGAGTTCTGCTCAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp GGTTTATTAGTAAAGGGTCAGGAGAGGAATCAGTTAAAATCAAGTGGGGCATGGATGCTGGTATCTCCTTaGGTATGGTCCCAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: GLLVKGQERNQLKSSGAWMLVSP*VWSQCS
Trigger: CGAGCACTGGGACCATACCAAAGGAGATACCAGCAT...CCATGCCCCACTTGATTTTAACTGATTCCTCTCCTGACCCTTTACTAATAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS-3UTR CAA 90 bp GATCCAACCATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACTTTCAGCTGCAAATTaGAAATACAGGGTCTCACAG +
Preference number: 5 (lower is better)
Translates to: DPTIGIYCPAWFLSTPARLSAAN*KYRVSQ
Trigger: CTGTGAGACCCTGTATTTCAAATTTGCAGCTGAAAG...TCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATGGTTGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp CATAGGGATCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTACTTTCAGCTGCAAATTaGAAATACAGGGTCTCACAG +
Preference number: 5 (lower is better)
Translates to: HRDLLSCLVSIHTSKTELLSAAN*KYRVSQ
Trigger: CTGTGAGACCCTGTATTTCAAATTTGCAGCTGAAAG...TAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGATCCCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp TCTACTGTCCTGCCTGGTTTCTATCCACACCAGCAAGACAGAATTATAGGTGGACTTTCAGCTGCAAATTaGAAATACAGGGTCTCACAG +
Preference number: 5 (lower is better)
Translates to: STVLPGFYPHQQDRIIGGLSAAN*KYRVSQ
Trigger: CTGTGAGACCCTGTATTTCAAATTTGCAGCTGAAAG...TCCACCTATAATTCTGTCTTGCTGGTGTGGATAGAAACCAGGCAGGACAGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000555003.5
ENST00000555247.5
ENST00000557298.5
CDS-3UTR CAA 90 bp TTCAGCTGCAAATTTGAAATACAGGGTCTCACAGAAATGGGCTCCAAACAGAACATCAGGTCTCCTGTGTaGCATAGACTGTTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: FSCKFEIQGLTEMGSKQNIRSPV*HRLLFP
Trigger: TGGGAACAACAGTCTATGCAACACAGGAGACCTGAT...GTTCTGTTTGGAGCCCATTTCTGTGAGACCCTGTATTTCAAATTTGCAGCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS TCA 72 bp CCACCTCCGCCGGACACTTCCTGTCCCGTCCCGGACTaGAGAGGCTGCTTGGGACAGAGTCTGGAGCTGGAT +
Preference number: 6 (lower is better)
Translates to: PPPPDTSCPVPD*RGCLGQSLELD
Trigger: ATCCAGCTCCAGACTCTGTCCCAAGCAGCCTCTTCAGTCCGGGACGGGACAGGAAGTGTCCGGCGGAGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS GCA 72 bp CGGCAGTCACTCCAGGACAACACAGCTTCACGGACCTaGCTGGCTGCCCATACTGGACCCCTGTGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: RQSLQDNTASRT*LAAHTGPLWRA
Trigger: TGCCCTCCACAGGGGTCCAGTATGGGCAGCCAGGCAGGTCCGTGAAGCTGTGTTGTCCTGGAGTGACTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478308.1
ENST00000553969.1
CDS GCA 72 bp CTCACAGCCCAGCTGCAGGGTCACTGTGCCCCCAAGTaGACCATCCAGGGTCTGGCAGATGTAGGTGCCCTC +
Preference number: 6 (lower is better)
Translates to: LTAQLQGHCAPK*TIQGLADVGAL
Trigger: GAGGGCACCTACATCTGCCAGACCCTGGATGGTGCACTTGGGGGCACAGTGACCCTGCAGCTGGGCTGTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553969.1
CDS CCA 72 bp ACACACTCCCTACCCGCCCCTTTAGCCCCTGTGGGCTaGAGCAGAGCCAAGCTGCAGCCACTCACAAAGCCA +
Preference number: 6 (lower is better)
Translates to: THSLPAPLAPVG*SRAKLQPLTKP
Trigger: TGGCTTTGTGAGTGGCTGCAGCTTGGCTCTGCTCCAGCCCACAGGGGCTAAAGGGGCGGGTAGGGAGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS CAA 90 bp CTGGCTGGGACTCCAAGTGCAAGAGAAGTTCTCATAGTCGGCTGCTaGGCAGGAGACAACAGGGCGGGCTGGAGGGTCCGGCAGTCACTC +
Preference number: 6 (lower is better)
Translates to: LAGTPSAREVLIVGC*AGDNRAGWRVRQSL
Trigger: GAGTGACTGCCGGACCCTCCAGCCCGCCCTGTTGTCTCCTGCCAAGCAGCCGACTATGAGAACTTCTCTTGCACTTGGAGTCCCAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557298.5
CDS GCA 72 bp ACTCCAGGACAACACAGCTTCACGGACCTGCCTGGCTaGCCATACTGGACCCCTGTGGAGGGCACTTCTGAG +
Preference number: 6 (lower is better)
Translates to: TPGQHSFTDLPG*PYWTPVEGTSE
Trigger: CTCAGAAGTGCCCTCCACAGGGGTCCAGTATGGGCAGCCAGGCAGGTCCGTGAAGCTGTGTTGTCCTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478308.1
ENST00000553969.1
CDS CCA 72 bp CAACACAGCTTCACGGACCTGCCTGGCTGCCCATACTaGACCCCTGTGGAGGGCACTTCTGAGGTAAGGCTC +
Preference number: 6 (lower is better)
Translates to: QHSFTDLPGCPY*TPVEGTSEVRL
Trigger: GAGCCTTACCTCAGAAGTGCCCTCCACAGGGGTCCAGTATGGGCAGCCAGGCAGGTCCGTGAAGCTGTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478308.1
ENST00000553969.1
CDS CCA 72 bp CAGAGCATGTGTGAGGATCAGAGGCTGAGGGACCAATaGCAGTCACTTACCAGAGCCCCAGTGCCAGGGCCC +
Preference number: 6 (lower is better)
Translates to: QSMCEDQRLRDQ*QSLTRAPVPGP
Trigger: GGGCCCTGGCACTGGGGCTCTGGTAAGTGACTGCCATTGGTCCCTCAGCCTCTGATCCTCACACATGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS GCA 72 bp TCATCAGTGCTGTCTGCCTGGGCCAGGACCAGTTCATaGCCTAGCCCAGAGTCAGGTCCCTGGAGCAGCTTT +
Preference number: 6 (lower is better)
Translates to: SSVLSAWARTSS*PSPESGPWSSF
Trigger: AAAGCTGCTCCAGGGACCTGACTCTGGGCTAGGGCATGAACTGGTCCTGGCCCAGGCAGACAGCACTGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000318041.13
ENST00000441545.7
ENST00000478802.2
ENST00000553969.1
ENST00000555003.5
ENST00000555247.5
ENST00000555981.5
ENST00000556531.5
ENST00000556792.5
ENST00000602473.5
CDS GCA 72 bp GGGACTCCAAGTGCAAGAGAAGTTCTCATAGTCGGCTaGTTGGCAGGAGACAACAGGGCGGGCTGGAGGGTC +
Preference number: 6 (lower is better)
Translates to: GTPSAREVLIVG*LAGDNRAGWRV
Trigger: GACCCTCCAGCCCGCCCTGTTGTCTCCTGCCAAGCAGCCGACTATGAGAACTTCTCTTGCACTTGGAGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553620.5
ENST00000557298.5
CDS CCA 72 bp CTGGGGCATAGAAAGGCAGCTGTCTCTCCAACAATGTaGGTTATCTCAGTCAGAGCCCCAGTGCCAGGGCCC +
Preference number: 6 (lower is better)
Translates to: LGHRKAAVSPTM*VISVRAPVPGP
Trigger: GGGCCCTGGCACTGGGGCTCTGACTGAGATAACCCACATTGTTGGAGAGACAGCTGCCTTTCTATGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466082.1
CDS CCA 72 bp CAAGAAAGGGTCATGAGTGTCAGACCAACAGGCAGGTaGGGCACTTACCCGGCAGTCACTCCAGGACAACAC +
Preference number: 6 (lower is better)
Translates to: QERVMSVRPTGR*GTYPAVTPGQH
Trigger: GTGTTGTCCTGGAGTGACTGCCGGGTAAGTGCCCCACCTGCCTGTTGGTCTGACACTCATGACCCTTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555579.1
CDS TCA 72 bp CACAAGGGCAGCAGAAGTATATGGTGCCCGCACATGTaGGAGTCTGGAGGAGCCAAGGACACAAAGCCACGT +
Preference number: 6 (lower is better)
Translates to: HKGSRSIWCPHM*ESGGAKDTKPR
Trigger: ACGTGGCTTTGTGTCCTTGGCTCCTCCAGACTCTCACATGTGCGGGCACCATATACTTCTGCTGCCCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS TCA 72 bp GGAGATGAATGTGGTCTATGGGCATCAGAGCATGTGTaGGGATCAGAGGCTGAGGGACCAATGGCAGTCACT +
Preference number: 6 (lower is better)
Translates to: GDECGLWASEHV*GSEAEGPMAVT
Trigger: AGTGACTGCCATTGGTCCCTCAGCCTCTGATCCTCACACATGCTCTGATGCCCATAGACCACATTCATCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602473.5
CDS GCA 72 bp CTACTCCCCAGTCATGGGAAGCTCGAGGGAAATGTGTaGATACTATGTCTATCAGATCTTCCAGACCAGGGC +
Preference number: 6 (lower is better)
Translates to: LLPSHGKLEGNV*ILCLSDLPDQG
Trigger: GCCCTGGTCTGGAAGATCTGATAGACATAGTATGCACACATTTCCCTCGAGCTTCCCATGACTGGGGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS GCA 72 bp AACCATTCTGGCCATCCCTGCATCATTCACAATGCCTaGCTTCGCCTTAAAATTTGGAGGACACCAGTGGCA +
Preference number: 6 (lower is better)
Translates to: NHSGHPCIIHNA*LRLKIWRTPVA
Trigger: TGCCACTGGTGTCCTCCAAATTTTAAGGCGAAGGCAGGCATTGTGAATGATGCAGGGATGGCCAGAATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555003.5
CDS GCA 72 bp GGAAAGAACGAAGGCAAAAACCATTCTGGCCATCCCTaGATCATTCACAATGCCTGCCTTCGCCTTAAAATT +
Preference number: 6 (lower is better)
Translates to: GKNEGKNHSGHP*IIHNACLRLKI
Trigger: AATTTTAAGGCGAAGGCAGGCATTGTGAATGATGCAGGGATGGCCAGAATGGTTTTTGCCTTCGTTCTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555003.5