RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGHM (Homo sapiens)

Ensembl gene IDs: ENSG00000211899

Ensembl transcript IDs: ENST00000390559.6, ENST00000626472.2, ENST00000637539.2

Found 322 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCTGCAAGCCAGCCAGCCCCTGCCGGTCGAGAAGGAAGCCTGTGTaGGAGCACACAACTGGAGGCCGGGCGGGGAAGAGAAACACGTGC +
Preference number: 1 (lower is better)
Translates to: ACKPASPCRSRRKPV*EHTTGGRAGKRNTC
Trigger: GCACGTGTTTCTCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGACCGGCAGGGGCTGGCTGGCTTGCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
3UTR-3UTR CCA 90 bp GAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGAGGCTTGAGTTCCTCTCTCTaGTCTCCGATGTTCTTCTGT +
Preference number: 2 (lower is better)
Translates to: EEKHVPTGHAGQDPRPGGLSSSL*SPMFFC
Trigger: ACAGAAGAACATCGGAGACCAGAGAGAGGAACTCAA...GCCTCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
3UTR-3UTR TCA 90 bp TATTTATTTCAGGGCAACAAGCGTATACACAGCAAAGCAGTGTGGGGTAGAGCCAGAAGGAAGCCTGTGTaGGAGCACACAACTGGAGGC +
Preference number: 2 (lower is better)
Translates to: YLFQGNKRIHSKAVWGRARRKPV*EHTTGG
Trigger: GCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCT...GGCTCTACCCCACACTGCTTTGCTGTGTATACGCTTGTTGCCCTGAAATAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
3UTR TCA 72 bp CCAGCCAGCCCCTGCCGGTCGAGAAGGAAGCCTGTGTaGGAGCACACAACTGGAGGCCGGGCGGGGAAGAGA +
Preference number: 3 (lower is better)
Translates to: PASPCRSRRKPV*EHTTGGRAGKR
Trigger: TCTCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGACCGGCAGGGGCTGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
3UTR GCA 72 bp AGCAAAGCAGTGTGGGGTAGAGCCCACCTCGTGGCCTaGAAGCCAGCCAGCCCCTGCCGGTCGAGAAGGAAG +
Preference number: 3 (lower is better)
Translates to: SKAVWGRAHLVA*KPASPCRSRRK
Trigger: CTTCCTTCTCGACCGGCAGGGGCTGGCTGGCTTGCAGGCCACGAGGTGGGCTCTACCCCACACTGCTTTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
3UTR GCA 72 bp AAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTaGATGCACACACAGAGCGGCCAGCCGCCCCGAGCC +
Preference number: 3 (lower is better)
Translates to: KMQHLTPLTRLV*MHTQSGQPPRA
Trigger: GGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp TGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGGGATCCACGCGGCAGGTaGACATGCTCTGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: CMHTQSGQPPRACGQASRDPRGR*TCSGRA
Trigger: GGCTCGGCCAGAGCATGTTCACCTGCCGCGTGGATC...CCTGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp GGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCACCGTCACCAGGCACGTaGTGGTGGCCGACTCCCGCA +
Preference number: 4 (lower is better)
Translates to: GRAGKRNTCQQATQARTPPSPGT*WWPTPA
Trigger: TGCGGGAGTCGGCCACCATCACGTGCCTGGTGACGG...TGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR GCA 90 bp CCCACCTCGTGGCCTGCAAGCCAGCCAGCCCCTGCCGGTCGAGAAGGAAGCCTGACGCCAGACCCCACCTaGTTCCCCTCGCGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PTSWPASQPAPAGREGSLTPDPT*FPSRSQ
Trigger: CTGGCTGCGCGAGGGGAAGCAGGTGGGGTCTGGCGT...CAGGCTTCCTTCTCGACCGGCAGGGGCTGGCTGGCTTGCAGGCCACGAGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR GCA 90 bp CCCACCTCGTGGCCTGCAAGCCAGCCAGCCCCTGCCGGTCGAGAAGGAAGCCTGTCCCGCAGGTTCAGCTaGTCCCGGGCTGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PTSWPASQPAPAGREGSLSRRFS*SRAGGS
Trigger: GCTGCCACCAGCCCGGGAGCAGCTGAACCTGCGGGA...CAGGCTTCCTTCTCGACCGGCAGGGGCTGGCTGGCTTGCAGGCCACGAGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR GCA 90 bp CGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACGCCCACCTCGTGGCCTaGAAGCCAGCCAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: RAGKRNTCQQATQARTPDAHLVA*KPASPC
Trigger: GCAGGGGCTGGCTGGCTTGCAGGCCACGAGGTGGGC...GTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp AGGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCGCAGGGCCACCCCCTTaGGCCGGGAGATGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: RPGGEEKHVPTGHAGQDPAGPPP*AGRWSA
Trigger: AGCAGACCATCTCCCGGCCCAAGGGGGTGGCCCTGC...GGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp TTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGCCCCCTCTCAGGACTaGTGGGAAGCCCCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: FACTHRAASRPEPVGRPAAPSQD*WEAPGA
Trigger: AGCACCCGGGGCTTCCCATCAGTCCTGAGAGGGGGC...TGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp AGGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCCCGTGGCCTGGCAGATaGGCTTGGACTTGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: RPGGEEKHVPTGHAGQDPPWPGR*AWTCGG
Trigger: ACCCCCGCAAGTCCAAGCTCATCTGCCAGGCCACGG...GGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCCT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp TTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCACCGTCACCAGGCACGTaGTGGTGGCCGACTCCCGCA +
Preference number: 4 (lower is better)
Translates to: FACTHRAASRPEPVGRPAPSPGT*WWPTPA
Trigger: TGCGGGAGTCGGCCACCATCACGTGCCTGGTGACGG...TGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp TTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCACCACGGTCCTCTCGGTaGCCCTGTTGGGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: FACTHRAASRPEPVGRPAPRSSR*PCWAGP
Trigger: AGGCCCTGCCCAACAGGGTCACCGAGAGGACCGTGG...TGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCTACCGGCCTGGGGCCTaGGGCTCAGGCATTGGGGCG +
Preference number: 4 (lower is better)
Translates to: VSLHAHTERPAAPSLWAGYRPGA*GSGIGA
Trigger: CGCCCCAATGCCTGAGCCCCAGGCCCCAGGCCGGTA...GCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGAGGTACCGGCCTGGGGCCTaGGGCTCAGGCATTGGGGCG +
Preference number: 4 (lower is better)
Translates to: GRETRANRPRRPGPQTRRYRPGA*GSGIGA
Trigger: CGCCCCAATGCCTGAGCCCCAGGCCCCAGGCCGGTA...CCTCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp TTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGGCGAAGTACCGGCCTaGGGCCTGGGGCTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: FACTHRAASRPEPVGRPAGEVPA*GLGLRH
Trigger: ATGCCTGAGCCCCAGGCCCCAGGCCGGTACTTCGCC...TGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp ACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGGCCGCCCCGAGCCTGTaGGCAGGCCAGCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: TRLVCMHTQSGQPPRACGAAPSL*AGQQGQ
Trigger: CTGACCCTGCTGGCCTGCCCACAGGCTCGGGGCGGC...CCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp AGGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCGAATCTGCCGGGGACTaGAACCCGTGGCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: RPGGEEKHVPTGHAGQDPESAGD*NPWPGR
Trigger: TCTGCCAGGCCACGGGTTTCAGTCCCCGGCAGATTC...GGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp TTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGAAGGTCAGGCCCCTGTaGTCCACGCGGCAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: LHAHTERPAAPSLWAGQQKVRPL*STRQVN
Trigger: GTTCACCTGCCGCGTGGATCACAGGGGCCTGACCTT...CTGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp TTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGGGGTCACGGTGCACGTaGACCTCTCCCCGGAATTCC +
Preference number: 4 (lower is better)
Translates to: LHAHTERPAAPSLWAGQQGSRCT*TSPRNS
Trigger: GGAATTCCGGGGAGAGGTTCACGTGCACCGTGACCC...CTGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp TTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGGCCGGGAGATGGTCTaGTTCAGTGGCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FACTHRAASRPEPVGRPAGREMV*FSGEGR
Trigger: CCTGCCCTCGCCACTGAAGCAGACCATCTCCCGGCC...TGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp AGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGGCCTCAGCCTGCACCTaGTCCGTGGTGACGCCAGAC +
Preference number: 4 (lower is better)
Translates to: SLHAHTERPAAPSLWAGQASACT*SVVTPD
Trigger: GTCTGGCGTCACCACGGACCAGGTGCAGGCTGAGGC...CTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp TGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGGGGCGGGTCCAGGAGATaGTCACGCTGTCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: CMHTQSGQPPRACGQASRGGSRR*SRCHRW
Trigger: CCACCTATGACAGCGTGACCATCTCCTGGACCCGCC...CCTGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGTACCGGCCTGGGGCCTaGGGCTCAGGCATTGGGGCG +
Preference number: 4 (lower is better)
Translates to: DTVSLHAHTERPAAPSLWYRPGA*GSGIGA
Trigger: CGCCCCAATGCCTGAGCCCCAGGCCCCAGGCCGGTA...CCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp TTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGACGGTCAGGATGCTGTaGGCGAAGTACCGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LHAHTERPAAPSLWAGQQTVRML*AKYRPG
Trigger: CCCAGGCCGGTACTTCGCCCACAGCATCCTGACCGT...CTGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp CACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGGCCCCCTCTCAGGACTaGTGGGAAGCCCCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: HPVDTVSLHAHTERPAAPAPSQD*WEAPGA
Trigger: AGCACCCGGGGCTTCCCATCAGTCCTGAGAGGGGGC...CGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp TTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGCGCAGCCAGGACACCTaGATCTGCCGGGGACTGAAA +
Preference number: 4 (lower is better)
Translates to: LHAHTERPAAPSLWAGQQRSQDT*ICRGLK
Trigger: TTTCAGTCCCCGGCAGATTCAGGTGTCCTGGCTGCG...CTGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp ACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCCGTCACCAGGCACGTaGTGGTGGCCGACTCCCGCA +
Preference number: 4 (lower is better)
Translates to: TRLVCMHTQSGQPPRACGPSPGT*WWPTPA
Trigger: TGCGGGAGTCGGCCACCATCACGTGCCTGGTGACGG...CCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp CACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGACGCCAGACCCCACCTaGTTCCCCTCGCGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: HPVDTVSLHAHTERPAAPTPDPT*FPSRSQ
Trigger: CTGGCTGCGCGAGGGGAAGCAGGTGGGGTCTGGCGT...CGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp CACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGTCCCGCAGGTTCAGCTaGTCCCGGGCTGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: HPVDTVSLHAHTERPAAPSRRFS*SRAGGS
Trigger: GCTGCCACCAGCCCGGGAGCAGCTGAACCTGCGGGA...CGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp GGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGAGGTCCGGGGACAAGGGCTaGCCCCTCTGCATCCACTGC +
Preference number: 4 (lower is better)
Translates to: GRETRANRPRRPGPQTRRSGDKG*PLCIHC
Trigger: GCAGTGGATGCAGAGGGGGCAGCCCTTGTCCCCGGA...CCTCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR GCA 90 bp AGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCGGACACGGTCAGGATaGTGTGGGCGAAGTACCGGC +
Preference number: 4 (lower is better)
Translates to: SLHAHTERPAAPSLWAGQRTRSG*CGRSTG
Trigger: GCCGGTACTTCGCCCACAGCATCCTGACCGTGTCCG...CTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp CGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGGCAGCACCTGTGAGGTaGCTGCGTACTTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: RGRETRANRPRRPGPQTRAAPVR*LRTCPL
Trigger: GAGGGGGCAAGTACGCAGCCACCTCACAGGTGCTGC...CCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp GGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGAAGCCGTCGCGGGGTaGGACGAAGACGCTCACTTT +
Preference number: 4 (lower is better)
Translates to: GRAGKRNTCQQATQARTPEAVAG*DEDAHF
Trigger: AAAGTGAGCGTCTTCGTCCCACCCCGCGACGGCTTC...TGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp CACAACTGGAGGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCGCCTCAGCCTGCACCTaGTCCGTGGTGACGCCAGAC +
Preference number: 4 (lower is better)
Translates to: HNWRPGGEEKHVPTGHAGASACT*SVVTPD
Trigger: GTCTGGCGTCACCACGGACCAGGTGCAGGCTGAGGC...GCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCCTCCAGTTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp TTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGGATGCTGGCAAAGGATaGGGGGATGGCGAAGACCCG +
Preference number: 4 (lower is better)
Translates to: LHAHTERPAAPSLWAGQQDAGKG*GDGEDP
Trigger: CGGGTCTTCGCCATCCCCCCATCCTTTGCCAGCATC...CTGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GGAGGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCGGCGGGTCCAGGAGATaGTCACGCTGTCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: GGRAGKRNTCQQATQARTGGSRR*SRCHRW
Trigger: CCACCTATGACAGCGTGACCATCTCCTGGACCCGCC...GGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp GGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCACAGCTGCTCCCGGGCTaGTGGCAGCAAGTAGACATC +
Preference number: 4 (lower is better)
Translates to: GRAGKRNTCQQATQARTPQLLPG*WQQVDI
Trigger: GATGTCTACTTGCTGCCACCAGCCCGGGAGCAGCTG...TGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp CACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGGGCGAAGTACCGGCCTaGGGCCTGGGGCTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: HPVDTVSLHAHTERPAAPGEVPA*GLGLRH
Trigger: ATGCCTGAGCCCCAGGCCCCAGGCCGGTACTTCGCC...CGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp AGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGACGGTCAGGATGCTGTaGGCGAAGTACCGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SLHAHTERPAAPSLWAGQTVRML*AKYRPG
Trigger: CCCAGGCCGGTACTTCGCCCACAGCATCCTGACCGT...CTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp TTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCACGTCTGTGCCCTGCATaGCGTCCTTGGAAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: FACTHRAASRPEPVGRPARLCPA*RPWKAA
Trigger: TGCTGCCTTCCAAGGACGTCATGCAGGGCACAGACG...TGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp GACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGCCGTGGCCTGGCAGATaGGCTTGGACTTGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: DTVSLHAHTERPAAPSLWPWPGR*AWTCGG
Trigger: ACCCCCGCAAGTCCAAGCTCATCTGCCAGGCCACGG...CCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp GTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGGCACCTGGTCCGTGGTaGCGCCAGACCCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: VDTVSLHAHTERPAAPSLAPGPW*RQTPPA
Trigger: AGCAGGTGGGGTCTGGCGTCACCACGGACCAGGTGC...CAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp GTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGAGGCACCTGGTCCGTGGTaGCGCCAGACCCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: VEKEACVRAHNWRPGGEEAPGPW*RQTPPA
Trigger: AGCAGGTGGGGTCTGGCGTCACCACGGACCAGGTGC...CTCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp GTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCGGGTCACGGTGCACGTaGACCTCTCCCCGGAATTCC +
Preference number: 4 (lower is better)
Translates to: VSLHAHTERPAAPSLWAGGSRCT*TSPRNS
Trigger: GGAATTCCGGGGAGAGGTTCACGTGCACCGTGACCC...GCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp CCTGCCGGTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGGTCACGGTGCACGTaGACCTCTCCCCGGAATTCC +
Preference number: 4 (lower is better)
Translates to: PAGREGSLCESTQLEAGRGSRCT*TSPRNS
Trigger: GGAATTCCGGGGAGAGGTTCACGTGCACCGTGACCC...CCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGACCGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp AGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGAGAAACACGTGCCCCACGGTCCTCTCGGTaGCCCTGTTGGGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SLCESTQLEAGRGRETRAPRSSR*PCWAGP
Trigger: AGGCCCTGCCCAACAGGGTCACCGAGAGGACCGTGG...GGCACGTGTTTCTCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp TGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGGCAGCTGTGTCGGACATaGCCAGGGACACGTTGTACA +
Preference number: 4 (lower is better)
Translates to: CMHTQSGQPPRACGQASRQLCRT*PGTRCT
Trigger: TGTACAACGTGTCCCTGGTCATGTCCGACACAGCTG...CCTGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp CGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACAGCCAACGGCCACGCTaGTCGTATCCGACGGGGAAT +
Preference number: 4 (lower is better)
Translates to: RAGKRNTCQQATQARTPDSQRPR*SYPTGN
Trigger: ATTCCCCGTCGGATACGAGCAGCGTGGCCGTTGGCT...GTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR GCA 90 bp TTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGAGGTGGCTGCGTACTTaGCCCCTCTCAGGACTGATG +
Preference number: 4 (lower is better)
Translates to: LHAHTERPAAPSLWAGQQRWLRT*PLSGLM
Trigger: CATCAGTCCTGAGAGGGGGCAAGTACGCAGCCACCT...CTGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp AGGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGGTGGCTGCGTACTTaGCCCCTCTCAGGACTGATG +
Preference number: 4 (lower is better)
Translates to: RPGGEEKHVPTGHAGQDPRWLRT*PLSGLM
Trigger: CATCAGTCCTGAGAGGGGGCAAGTACGCAGCCACCT...GGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR GCA 90 bp GACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGTGGACTTGCGGGGGTTaGCGAAGAAGCCGTCGCGGG +
Preference number: 4 (lower is better)
Translates to: DTVSLHAHTERPAAPSLWWTCGG*RRSRRG
Trigger: CCCGCGACGGCTTCTTCGGCAACCCCCGCAAGTCCA...CCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp AGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGTCTTTGGCCTCAGCCTaGACCTGGTCCGTGGTGACG +
Preference number: 4 (lower is better)
Translates to: SLHAHTERPAAPSLWAGQSLASA*TWSVVT
Trigger: CGTCACCACGGACCAGGTGCAGGCTGAGGCCAAAGA...CTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp GGAGGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCATGGAGGACGCATTCTaGTGGAAGGTCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GGRAGKRNTCQQATQARTMEDAF*WKVRPL
Trigger: CAGGGGCCTGACCTTCCAGCAGAATGCGTCCTCCAT...GGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR GCA 90 bp ACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGTCCGGGGACAAGGGCTaGCCCCTCTGCATCCACTGC +
Preference number: 4 (lower is better)
Translates to: TRLVCMHTQSGQPPRACGSGDKG*PLCIHC
Trigger: GCAGTGGATGCAGAGGGGGCAGCCCTTGTCCCCGGA...CCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp CCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCTCCGGGGACAAGGGCTaGCCCCTCTGCATCCACTGC +
Preference number: 4 (lower is better)
Translates to: PVDTVSLHAHTERPAAPSSGDKG*PLCIHC
Trigger: GCAGTGGATGCAGAGGGGGCAGCCCTTGTCCCCGGA...GCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp GGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGAGGCGGACACGGTCAGGATaGTGTGGGCGAAGTACCGGC +
Preference number: 4 (lower is better)
Translates to: GRETRANRPRRPGPQTRRRTRSG*CGRSTG
Trigger: GCCGGTACTTCGCCCACAGCATCCTGACCGTGTCCG...CCTCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp GTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCGCAGCACCTGTGAGGTaGCTGCGTACTTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: VSLHAHTERPAAPSLWAGAAPVR*LRTCPL
Trigger: GAGGGGGCAAGTACGCAGCCACCTCACAGGTGCTGC...GCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGAGCTGCTCCCGGGCTGGTaGCAGCAAGTAGACATCGGG +
Preference number: 4 (lower is better)
Translates to: GKRNTCQQATQARTPDPELLPGW*QQVDIG
Trigger: CCCGATGTCTACTTGCTGCCACCAGCCCGGGAGCAG...CTCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp GAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGAGGCACGGTCAGGATGCTGTaGGCGAAGTACCGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: EEKHVPTGHAGQDPRPGGTVRML*AKYRPG
Trigger: CCCAGGCCGGTACTTCGCCCACAGCATCCTGACCGT...GCCTCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp CACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGGCAGCAGCACCTGTaGGGTGGCTGCGTACTTGCC +
Preference number: 4 (lower is better)
Translates to: HPVDTVSLHAHTERPAAPRQQHL*GGCVLA
Trigger: GGCAAGTACGCAGCCACCTCACAGGTGCTGCTGCCT...CGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp GACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGAATCTGCCGGGGACTaGAACCCGTGGCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: DTVSLHAHTERPAAPSLWESAGD*NPWPGR
Trigger: TCTGCCAGGCCACGGGTTTCAGTCCCCGGCAGATTC...CCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp CGTGGCCTGCAAGCCAGCCAGCCCCTGCCGGTCGAGAAGGAAGCCTGTGTGAGACGCAGCCAGGACACCTaGATCTGCCGGGGACTGAAA +
Preference number: 4 (lower is better)
Translates to: RGLQASQPLPVEKEACVRRSQDT*ICRGLK
Trigger: TTTCAGTCCCCGGCAGATTCAGGTGTCCTGGCTGCG...TCTCACACAGGCTTCCTTCTCGACCGGCAGGGGCTGGCTGGCTTGCAGGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp GTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGAGGATCCACGCGGCAGGTaGACATGCTCTGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: VEKEACVRAHNWRPGGEEDPRGR*TCSGRA
Trigger: GGCTCGGCCAGAGCATGTTCACCTGCCGCGTGGATC...CTCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp GTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGAGCCTCACCCACGGCGCTaGAAGTGGCATTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VEKEACVRAHNWRPGGEEPHPRR*KWHWGG
Trigger: GCCACCCCAATGCCACTTTCAGCGCCGTGGGTGAGG...CTCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR GCA 90 bp CACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGGGGAAGGAAGTCCTGTaGGAGGCAGCCAACGGCCAC +
Preference number: 4 (lower is better)
Translates to: HPVDTVSLHAHTERPAAPGKEVL*EAANGH
Trigger: GTGGCCGTTGGCTGCCTCGCACAGGACTTCCTTCCC...CGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp GGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCATGTTCGTCTGTGCCCTaGATGACGTCCTTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GRAGKRNTCQQATQARTPCSSVP*MTSLEG
Trigger: GCCTTCCAAGGACGTCATGCAGGGCACAGACGAACA...TGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR GCA 90 bp GCCGGTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGATCTTTGGCCTCAGCCTaGACCTGGTCCGTGGTGACG +
Preference number: 4 (lower is better)
Translates to: AGREGSLCESTQLEAGRGSLASA*TWSVVT
Trigger: CGTCACCACGGACCAGGTGCAGGCTGAGGCCAAAGA...TCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGACCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR GCA 90 bp CCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCGGACACGGTCAGGATaGTGTGGGCGAAGTACCGGC +
Preference number: 4 (lower is better)
Translates to: PVDTVSLHAHTERPAAPSRTRSG*CGRSTG
Trigger: GCCGGTACTTCGCCCACAGCATCCTGACCGTGTCCG...GCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp TTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGTTGCCGTTGGGGTGCTaGACTTTGCACACCACGTGT +
Preference number: 4 (lower is better)
Translates to: LHAHTERPAAPSLWAGQQLPLGC*TLHTTC
Trigger: ACACGTGGTGTGCAAAGTCCAGCACCCCAACGGCAA...CTGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp TTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGTCACCTTGTAGGTCGTaGGCCCAGACTCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LHAHTERPAAPSLWAGQQSPCRS*AQTLWP
Trigger: AGGCCAAAGAGTCTGGGCCCACGACCTACAAGGTGA...CTGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp TTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCATGGCGAAGACCCGGATaGCTGTGTCTTGATCGGGGA +
Preference number: 4 (lower is better)
Translates to: FACTHRAASRPEPVGRPAWRRPG*LCLDRG
Trigger: TCCCCGATCAAGACACAGCCATCCGGGTCTTCGCCA...TGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGAGGGATGCTGGCAAAGGATaGGGGGATGGCGAAGACCCG +
Preference number: 4 (lower is better)
Translates to: GRETRANRPRRPGPQTRRDAGKG*GDGEDP
Trigger: CGGGTCTTCGCCATCCCCCCATCCTTTGCCAGCATC...CCTCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp GTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCGGCGGGTCCAGGAGATaGTCACGCTGTCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: VSLHAHTERPAAPSLWAGGGSRR*SRCHRW
Trigger: CCACCTATGACAGCGTGACCATCTCCTGGACCCGCC...GCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGAGGAGGGCAGGTCTGTGTaGGTCACGGTGCACGTGAAC +
Preference number: 4 (lower is better)
Translates to: GKRNTCQQATQARTPDPEEGRSV*VTVHVN
Trigger: GTTCACGTGCACCGTGACCCACACAGACCTGCCCTC...CTCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp TTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGGGTGGGTTTACCGGTaGACTTGTCCACGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: FACTHRAASRPEPVGRPAGWVYR*TCPRSS
Trigger: AGAGGACCGTGGACAAGTCCACCGGTAAACCCACCC...TGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp AGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGAGAAACACGTGCCAGGCAGCAGCACCTGTaGGGTGGCTGCGTACTTGCC +
Preference number: 4 (lower is better)
Translates to: SLCESTQLEAGRGRETRARQQHL*GGCVLA
Trigger: GGCAAGTACGCAGCCACCTCACAGGTGCTGCTGCCT...GGCACGTGTTTCTCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp GACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGCGTCTGTGCCCTGCATaGCGTCCTTGGAAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: DTVSLHAHTERPAAPSLWRLCPA*RPWKAA
Trigger: TGCTGCCTTCCAAGGACGTCATGCAGGGCACAGACG...CCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp GTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGAGAAGGTCAGGCCCCTGTaGTCCACGCGGCAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: VEKEACVRAHNWRPGGEEKVRPL*STRQVN
Trigger: GTTCACCTGCCGCGTGGATCACAGGGGCCTGACCTT...CTCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp GTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCGGATGGCTGTGTCTTaGTCGGGGACACACATGGAG +
Preference number: 4 (lower is better)
Translates to: VSLHAHTERPAAPSLWAGRMAVS*SGTHME
Trigger: CTCCATGTGTGTCCCCGATCAAGACACAGCCATCCG...GCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp CCTGCCGGTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGCGGATGGCTGTGTCTTaGTCGGGGACACACATGGAG +
Preference number: 4 (lower is better)
Translates to: PAGREGSLCESTQLEAGRRMAVS*SGTHME
Trigger: CTCCATGTGTGTCCCCGATCAAGACACAGCCATCCG...CCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGACCGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR GCA 90 bp GACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGAGCCAACGGCCACGCTaGTCGTATCCGACGGGGAAT +
Preference number: 4 (lower is better)
Translates to: DTVSLHAHTERPAAPSLWSQRPR*SYPTGN
Trigger: ATTCCCCGTCGGATACGAGCAGCGTGGCCGTTGGCT...CCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp TTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCATGGGGTGCTGGACTTTaGACACCACGTGTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: FACTHRAASRPEPVGRPAWGAGL*TPRVRL
Trigger: CAGACGAACACGTGGTGTGCAAAGTCCAGCACCCCA...TGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp ACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGGAAGCCGTCGCGGGGTaGGACGAAGACGCTCACTTT +
Preference number: 4 (lower is better)
Translates to: TRLVCMHTQSGQPPRACGEAVAG*DEDAHF
Trigger: AAAGTGAGCGTCTTCGTCCCACCCCGCGACGGCTTC...CCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCTGGCGAAGACCCGGATaGCTGTGTCTTGATCGGGGA +
Preference number: 4 (lower is better)
Translates to: VSLHAHTERPAAPSLWAGWRRPG*LCLDRG
Trigger: TCCCCGATCAAGACACAGCCATCCGGGTCTTCGCCA...GCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGCCTTGGGCCGGGAGATaGTCTGCTTCAGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: VDTVSLHAHTERPAAPSLPWAGR*SASVAR
Trigger: CCTCGCCACTGAAGCAGACCATCTCCCGGCCCAAGG...CAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGCTGCTCCCGGGCTGGTaGCAGCAAGTAGACATCGGG +
Preference number: 4 (lower is better)
Translates to: VDTVSLHAHTERPAAPSLLLPGW*QQVDIG
Trigger: CCCGATGTCTACTTGCTGCCACCAGCCCGGGAGCAG...CAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp TGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGGACACGTTGTACAGGGTaGGTTTACCGGTGGACTTGT +
Preference number: 4 (lower is better)
Translates to: CMHTQSGQPPRACGQASRTRCTG*VYRWTC
Trigger: ACAAGTCCACCGGTAAACCCACCCTGTACAACGTGT...CCTGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGAGGCACAGCAAAGCAGTGTaGGGTAGAGCCCACCTCGTG +
Preference number: 4 (lower is better)
Translates to: GRETRANRPRRPGPQTRRHSKAV*GRAHLV
Trigger: CACGAGGTGGGCTCTACCCCACACTGCTTTGCTGTG...CCTCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp GTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGAGCGTCTGTGCCCTGCATaGCGTCCTTGGAAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VEKEACVRAHNWRPGGEERLCPA*RPWKAA
Trigger: TGCTGCCTTCCAAGGACGTCATGCAGGGCACAGACG...CTCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp ACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCACCTGGTCCGTGGTaGCGCCAGACCCCACCTGCT +
Preference number: 4 (lower is better)
Translates to: TSHPVDTVSLHAHTERPAAPGPW*RQTPPA
Trigger: AGCAGGTGGGGTCTGGCGTCACCACGGACCAGGTGC...GGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp CCTGCCGGTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGCCAGTCGCTCTCTTTaGTGGTCAGTGTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PAGREGSLCESTQLEAGRASRSL*WSVCWS
Trigger: TGACCAGCACACTGACCATCAAAGAGAGCGACTGGC...CCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGACCGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp CACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGCGGATGGCTGTGTCTTaGTCGGGGACACACATGGAG +
Preference number: 4 (lower is better)
Translates to: HPVDTVSLHAHTERPAAPRMAVS*SGTHME
Trigger: CTCCATGTGTGTCCCCGATCAAGACACAGCCATCCG...CGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp CCTGCCGGTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGAGAAGGAAGCCTGTGTaGGAGCACACAACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PAGREGSLCESTQLEAGRRRKPV*EHTTGG
Trigger: GCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCT...CCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGACCGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR GCA 90 bp GGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGAGTGGGGTGCTGGACTTTaGACACCACGTGTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: GKRNTCQQATQARTPDPEWGAGL*TPRVRL
Trigger: CAGACGAACACGTGGTGTGCAAAGTCCAGCACCCCA...CTCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR GCA 90 bp GTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCTTGTTGCCGTTGGGGTaGTGGACTTTGCACACCACG +
Preference number: 4 (lower is better)
Translates to: VSLHAHTERPAAPSLWAGLLPLG*WTLHTT
Trigger: CGTGGTGTGCAAAGTCCAGCACCCCAACGGCAACAA...GCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp GGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGAGGTTGTTGCCGTTGGGGTaGTGGACTTTGCACACCACG +
Preference number: 4 (lower is better)
Translates to: GRETRANRPRRPGPQTRRLLPLG*WTLHTT
Trigger: CGTGGTGTGCAAAGTCCAGCACCCCAACGGCAACAA...CCTCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR GCA 90 bp ACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCACGCCAGACCCCACCTaGTTCCCCTCGCGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TSHPVDTVSLHAHTERPATPDPT*FPSRSQ
Trigger: CTGGCTGCGCGAGGGGAAGCAGGTGGGGTCTGGCGT...GGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp TGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGGTTTCTTTGTTGCCGTTaGGGTGCTGGACTTTGCACA +
Preference number: 4 (lower is better)
Translates to: CMHTQSGQPPRACGQASRFLCCR*GAGLCT
Trigger: TGTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAA...CCTGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGAGCTGAAACCCGTGGCCTaGCAGATGAGCTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: GKRNTCQQATQARTPDPELKPVA*QMSLDL
Trigger: CAAGTCCAAGCTCATCTGCCAGGCCACGGGTTTCAG...CTCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp GGTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGATGGGCCCAGACTCTTTaGCCTCAGCCTGCACCTGGT +
Preference number: 4 (lower is better)
Translates to: GREGSLCESTQLEAGRGRWAQTL*PQPAPG
Trigger: ACCAGGTGCAGGCTGAGGCCAAAGAGTCTGGGCCCA...TCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp ACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGTGAACATGCTCTaGCCGAGCCAGTCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: TRLVCMHTQSGQPPRACGQVNML*PSQSLS
Trigger: AGAGAGCGACTGGCTCGGCCAGAGCATGTTCACCTG...CCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp CCTGCCGGTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGATCGGGGACACACATaGAGGACGCATTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PAGREGSLCESTQLEAGRDRGHT*RTHSAG
Trigger: TCCAGCAGAATGCGTCCTCCATGTGTGTCCCCGATC...CCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGACCGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp GACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGACAGCTTCGCCATTCTaGCGGGTCCAGGAGATGGTC +
Preference number: 4 (lower is better)
Translates to: DTVSLHAHTERPAAPSLWTASPF*RVQEMV
Trigger: GACCATCTCCTGGACCCGCCAGAATGGCGAAGCTGT...CCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp ACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCAGGGCCACCCCCTTaGGCCGGGAGATGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: TSHPVDTVSLHAHTERPAAGPPP*AGRWSA
Trigger: AGCAGACCATCTCCCGGCCCAAGGGGGTGGCCCTGC...GGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GGTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGACAGGCATTGGGGCGCTaGTCACATACTTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GREGSLCESTQLEAGRGRQALGR*SHTSPG
Trigger: CCCCGGAGAAGTATGTGACCAGCGCCCCAATGCCTG...TCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp GACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGGGTGGGTTTACCGGTaGACTTGTCCACGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: DTVSLHAHTERPAAPSLWGWVYR*TCPRSS
Trigger: AGAGGACCGTGGACAAGTCCACCGGTAAACCCACCC...CCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCTCACCTCCCCCTCGGTaGACTTGTCCACGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: VRAHNWRPGGEEKHVPTGSPPPR*TCPRSS
Trigger: AGAGGACCGTGGACAAGTCCACCGAGGGGGAGGTGA...GCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp GACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCCAGTCGCTCTCTTTaGTGGTCAGTGTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: DTVSLHAHTERPAAPSLWASRSL*WSVCWS
Trigger: TGACCAGCACACTGACCATCAAAGAGAGCGACTGGC...CCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp GGTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGAAGGTGGTCAGGTCTGTaGCCAGGCAGGTCAACTTGG +
Preference number: 4 (lower is better)
Translates to: GREGSLCESTQLEAGRGRRWSGL*PGRSTW
Trigger: CCAAGTTGACCTGCCTGGTCACAGACCTGACCACCT...TCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp ACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCCCTCACCCACGGCGCTaGAAGTGGCATTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: TSHPVDTVSLHAHTERPAPHPRR*KWHWGG
Trigger: GCCACCCCAATGCCACTTTCAGCGCCGTGGGTGAGG...GGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp GCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCACCACGGTCCTCTCGGTaGCCCTGTTGGGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ATSHPVDTVSLHAHTERPPRSSR*PCWAGP
Trigger: AGGCCCTGCCCAACAGGGTCACCGAGAGGACCGTGG...TGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp CCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCAGCTGTGTCGGACATaGCCAGGGACACGTTGTACA +
Preference number: 4 (lower is better)
Translates to: PVDTVSLHAHTERPAAPSQLCRT*PGTRCT
Trigger: TGTACAACGTGTCCCTGGTCATGTCCGACACAGCTG...GCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp GTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGAGGTGGCTGCGTACTTaGCCCCTCTCAGGACTGATG +
Preference number: 4 (lower is better)
Translates to: VDTVSLHAHTERPAAPSLRWLRT*PLSGLM
Trigger: CATCAGTCCTGAGAGGGGGCAAGTACGCAGCCACCT...CAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp ACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGGCCGGGAGATGGTCTaGTTCAGTGGCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TSHPVDTVSLHAHTERPAGREMV*FSGEGR
Trigger: CCTGCCCTCGCCACTGAAGCAGACCATCTCCCGGCC...GGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp TTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGCAGCTCAGCAATCACTaGAAGAGGCACGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LHAHTERPAAPSLWAGQQQLSNH*KRHVLF
Trigger: GAAAAGAACGTGCCTCTTCCAGTGATTGCTGAGCTG...CTGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp CCCACCTCGTGGCCTGCAAGCCAGCCAGCCCCTGCCGGTCGAGAAGGAAGCCTGCAGCTCAGCAATCACTaGAAGAGGCACGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: PTSWPASQPAPAGREGSLQLSNH*KRHVLF
Trigger: GAAAAGAACGTGCCTCTTCCAGTGATTGCTGAGCTG...CAGGCTTCCTTCTCGACCGGCAGGGGCTGGCTGGCTTGCAGGCCACGAGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp CGTGGCCTGCAAGCCAGCCAGCCCCTGCCGGTCGAGAAGGAAGCCTGTGTGAGACGAAGACGCTCACTTTaGGAGGCAGCTCAGCAATCA +
Preference number: 4 (lower is better)
Translates to: RGLQASQPLPVEKEACVRRRRSL*EAAQQS
Trigger: TGATTGCTGAGCTGCCTCCCAAAGTGAGCGTCTTCG...TCTCACACAGGCTTCCTTCTCGACCGGCAGGGGCTGGCTGGCTTGCAGGCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp CACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGCTGAAACCCGTGGCCTaGCAGATGAGCTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: HPVDTVSLHAHTERPAAPLKPVA*QMSLDL
Trigger: CAAGTCCAAGCTCATCTGCCAGGCCACGGGTTTCAG...CGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp AGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGAGAAACACGTGCCCAGGTGAACATGCTCTaGCCGAGCCAGTCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SLCESTQLEAGRGRETRAQVNML*PSQSLS
Trigger: AGAGAGCGACTGGCTCGGCCAGAGCATGTTCACCTG...GGCACGTGTTTCTCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp GTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCACAGCTTCGCCATTCTaGCGGGTCCAGGAGATGGTC +
Preference number: 4 (lower is better)
Translates to: VRAHNWRPGGEEKHVPTGTASPF*RVQEMV
Trigger: GACCATCTCCTGGACCCGCCAGAATGGCGAAGCTGT...GCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp GTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGAGAGCCCCGGGTGCTGCTaGTGTCAGAGTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: VEKEACVRAHNWRPGGEESPGCC*CQSCSC
Trigger: ACAAGAACAACTCTGACATCAGCAGCACCCGGGGCT...CTCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp GCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCACCTCACCCACGGCGCTaGAAGTGGCATTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ATSHPVDTVSLHAHTERPPHPRR*KWHWGG
Trigger: GCCACCCCAATGCCACTTTCAGCGCCGTGGGTGAGG...TGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp GTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGTTCGTCTGTGCCCTaGATGACGTCCTTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VDTVSLHAHTERPAAPSLCSSVP*MTSLEG
Trigger: GCCTTCCAAGGACGTCATGCAGGGCACAGACGAACA...CAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGCGAAGACGCTCACTTTaGGAGGCAGCTCAGCAATCA +
Preference number: 4 (lower is better)
Translates to: DTVSLHAHTERPAAPSLWRRRSL*EAAQQS
Trigger: TGATTGCTGAGCTGCCTCCCAAAGTGAGCGTCTTCG...CCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp ATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCGATCCACGCGGCAGGTaGACATGCTCTGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: MQHLTPLTRLVCMHTQSGDPRGR*TCSGRA
Trigger: GGCTCGGCCAGAGCATGTTCACCTGCCGCGTGGATC...GCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp GATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGTGGACTTGCGGGGGTTaGCGAAGAAGCCGTCGCGGG +
Preference number: 4 (lower is better)
Translates to: DATSHPVDTVSLHAHTERWTCGG*RRSRRG
Trigger: CCCGCGACGGCTTCTTCGGCAACCCCCGCAAGTCCA...CCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp ACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCCAGCTGCTCCCGGGCTaGTGGCAGCAAGTAGACATC +
Preference number: 4 (lower is better)
Translates to: TSHPVDTVSLHAHTERPAQLLPG*WQQVDI
Trigger: GATGTCTACTTGCTGCCACCAGCCCGGGAGCAGCTG...GGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp ATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCGAATCTGCCGGGGACTaGAACCCGTGGCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: MQHLTPLTRLVCMHTQSGESAGD*NPWPGR
Trigger: TCTGCCAGGCCACGGGTTTCAGTCCCCGGCAGATTC...GCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp GCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCACGCAGCCAGGACACCTaGATCTGCCGGGGACTGAAA +
Preference number: 4 (lower is better)
Translates to: ATSHPVDTVSLHAHTERPRSQDT*ICRGLK
Trigger: TTTCAGTCCCCGGCAGATTCAGGTGTCCTGGCTGCG...TGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp ATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCAAGGTCAGGCCCCTGTaGTCCACGCGGCAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: MQHLTPLTRLVCMHTQSGKVRPL*STRQVN
Trigger: GTTCACCTGCCGCGTGGATCACAGGGGCCTGACCTT...GCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp ATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCGCAGCACCTGTGAGGTaGCTGCGTACTTGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: MQHLTPLTRLVCMHTQSGAAPVR*LRTCPL
Trigger: GAGGGGGCAAGTACGCAGCCACCTCACAGGTGCTGC...GCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGAAGCCGTCGCGGGGTaGGACGAAGACGCTCACTTT +
Preference number: 4 (lower is better)
Translates to: ATSHPVDTVSLHAHTERPEAVAG*DEDAHF
Trigger: AAAGTGAGCGTCTTCGTCCCACCCCGCGACGGCTTC...TGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCATGGGCCCAGACTCTTTaGCCTCAGCCTGCACCTGGT +
Preference number: 4 (lower is better)
Translates to: ATSHPVDTVSLHAHTERPWAQTL*PQPAPG
Trigger: ACCAGGTGCAGGCTGAGGCCAAAGAGTCTGGGCCCA...TGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp AGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGAGAAACACGTGCCGGCTCTCGGAGATGTTaGTGTGGGTTTTCACAGCTT +
Preference number: 4 (lower is better)
Translates to: SLCESTQLEAGRGRETRAGSRRC*CGFSQL
Trigger: AAGCTGTGAAAACCCACACCAACATCTCCGAGAGCC...GGCACGTGTTTCTCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp GATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCTTGGGCCGGGAGATaGTCTGCTTCAGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: DATSHPVDTVSLHAHTERPWAGR*SASVAR
Trigger: CCTCGCCACTGAAGCAGACCATCTCCCGGCCCAAGG...CCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp AAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGCAGGGCCACCCCCTTaGGCCGGGAGATGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: KMQHLTPLTRLVCMHTQSAGPPP*AGRWSA
Trigger: AGCAGACCATCTCCCGGCCCAAGGGGGTGGCCCTGC...GCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCACAGGCATTGGGGCGCTaGTCACATACTTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: ATSHPVDTVSLHAHTERPQALGR*SHTSPG
Trigger: CCCCGGAGAAGTATGTGACCAGCGCCCCAATGCCTG...TGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp ACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCCTGGGGCTCAGGCATTaGGGCGCTGGTCACATACTT +
Preference number: 4 (lower is better)
Translates to: TSHPVDTVSLHAHTERPALGLRH*GAGHIL
Trigger: AAGTATGTGACCAGCGCCCCAATGCCTGAGCCCCAG...GGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp CACAACTGGAGGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCTTGAGTTCCTCTCTCTaGTCTCCGATGTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: HNWRPGGEEKHVPTGHAGLSSSL*SPMFFC
Trigger: ACAGAAGAACATCGGAGACCAGAGAGAGGAACTCAA...GCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCCTCCAGTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp ACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCAGCCCCGGGTGCTGCTaGTGTCAGAGTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: TSHPVDTVSLHAHTERPASPGCC*CQSCSC
Trigger: ACAAGAACAACTCTGACATCAGCAGCACCCGGGGCT...GGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp AAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCCCGTGGCCTGGCAGATaGGCTTGGACTTGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: KMQHLTPLTRLVCMHTQSPWPGR*AWTCGG
Trigger: ACCCCCGCAAGTCCAAGCTCATCTGCCAGGCCACGG...GCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp GCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAATGGAGGACGCATTCTaGTGGAAGGTCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: ATSHPVDTVSLHAHTERPMEDAF*WKVRPL
Trigger: CAGGGGCCTGACCTTCCAGCAGAATGCGTCCTCCAT...TGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GGTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGATTTCTTTGTTGCCGTTaGGGTGCTGGACTTTGCACA +
Preference number: 4 (lower is better)
Translates to: GREGSLCESTQLEAGRGRFLCCR*GAGLCT
Trigger: TGTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAA...TCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp ACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCTCACCTTGTAGGTCGTaGGCCCAGACTCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: TSHPVDTVSLHAHTERPASPCRS*AQTLWP
Trigger: AGGCCAAAGAGTCTGGGCCCACGACCTACAAGGTGA...GGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp ATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCGATGCTGGCAAAGGATaGGGGGATGGCGAAGACCCG +
Preference number: 4 (lower is better)
Translates to: MQHLTPLTRLVCMHTQSGDAGKG*GDGEDP
Trigger: CGGGTCTTCGCCATCCCCCCATCCTTTGCCAGCATC...GCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp ATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCGAGGGCAGGTCTGTGTaGGTCACGGTGCACGTGAAC +
Preference number: 4 (lower is better)
Translates to: MQHLTPLTRLVCMHTQSGEGRSV*VTVHVN
Trigger: GTTCACGTGCACCGTGACCCACACAGACCTGCCCTC...GCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp ATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCTGCTCCCGGGCTaGTGGCAGCAAGTAGACATC +
Preference number: 4 (lower is better)
Translates to: MQHLTPLTRLVCMHTQSGQLLPG*WQQVDI
Trigger: GATGTCTACTTGCTGCCACCAGCCCGGGAGCAGCTG...GCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp CACAACTGGAGGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCCGATGTTCTTCTGTTaGGATCATTTCACCTTGAAC +
Preference number: 4 (lower is better)
Translates to: HNWRPGGEEKHVPTGHAGPMFFC*DHFTLN
Trigger: GTTCAAGGTGAAATGATCCCAACAGAAGAACATCGG...GCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCCTCCAGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp ATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCAGGTGGTCAGGTCTGTaGCCAGGCAGGTCAACTTGG +
Preference number: 4 (lower is better)
Translates to: MQHLTPLTRLVCMHTQSGRWSGL*PGRSTW
Trigger: CCAAGTTGACCTGCCTGGTCACAGACCTGACCACCT...GCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp AAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGGAAGGAAGTCCTGTaGGAGGCAGCCAACGGCCAC +
Preference number: 4 (lower is better)
Translates to: KMQHLTPLTRLVCMHTQSGKEVL*EAANGH
Trigger: GTGGCCGTTGGCTGCCTCGCACAGGACTTCCTTCCC...GCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp GCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCATGTTCGTCTGTGCCCTaGATGACGTCCTTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: ATSHPVDTVSLHAHTERPCSSVP*MTSLEG
Trigger: GCCTTCCAAGGACGTCATGCAGGGCACAGACGAACA...TGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp ATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCATGGAGGACGCATTCTaGTGGAAGGTCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: MQHLTPLTRLVCMHTQSGMEDAF*WKVRPL
Trigger: CAGGGGCCTGACCTTCCAGCAGAATGCGTCCTCCAT...GCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp ATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCTGGGGCTCAGGCATTaGGGCGCTGGTCACATACTT +
Preference number: 4 (lower is better)
Translates to: MQHLTPLTRLVCMHTQSGLGLRH*GAGHIL
Trigger: AAGTATGTGACCAGCGCCCCAATGCCTGAGCCCCAG...GCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp TTTTATAAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACAGCCGCCCCGAGCCTGTaGGCAGGCCAGCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: FYKMQHLTPLTRLVCMHTAAPSL*AGQQGQ
Trigger: CTGACCCTGCTGGCCTGCCCACAGGCTCGGGGCGGC...TGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTTATAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp ATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCTGGGGTGCTGGACTTTaGACACCACGTGTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: MQHLTPLTRLVCMHTQSGWGAGL*TPRVRL
Trigger: CAGACGAACACGTGGTGTGCAAAGTCCAGCACCCCA...GCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp TATTTATTTCAGGGCAACAAGCGTATACACAGCAAAGCAGTGTGGGGTAGAGCCGGCCGGGAGATGGTCTaGTTCAGTGGCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: YLFQGNKRIHSKAVWGRAGREMV*FSGEGR
Trigger: CCTGCCCTCGCCACTGAAGCAGACCATCTCCCGGCC...GGCTCTACCCCACACTGCTTTGCTGTGTATACGCTTGTTGCCCTGAAATAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR GCA 90 bp ACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCTTGACACGGTTAGTTTaGATGCACACACAGAGCGGC +
Preference number: 4 (lower is better)
Translates to: TSHPVDTVSLHAHTERPALTRLV*MHTQSG
Trigger: GCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAA...GGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCTGAAACCCGTGGCCTaGCAGATGAGCTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: DATSHPVDTVSLHAHTERLKPVA*QMSLDL
Trigger: CAAGTCCAAGCTCATCTGCCAGGCCACGGGTTTCAG...CCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGGATCGGGGACACACATaGAGGACGCATTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: DATSHPVDTVSLHAHTERDRGHT*RTHSAG
Trigger: TCCAGCAGAATGCGTCCTCCATGTGTGTCCCCGATC...CCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp AAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGAGGGCAGGTCTGTGTaGGTCACGGTGCACGTGAAC +
Preference number: 4 (lower is better)
Translates to: KMQHLTPLTRLVCMHTQSEGRSV*VTVHVN
Trigger: GTTCACGTGCACCGTGACCCACACAGACCTGCCCTC...GCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp AAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCCAGGCATTGGGGCGCTaGTCACATACTTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: KMQHLTPLTRLVCMHTQSQALGR*SHTSPG
Trigger: CCCCGGAGAAGTATGTGACCAGCGCCCCAATGCCTG...GCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GCATATTTATTTCAGGGCAACAAGCGTATACACAGCAAAGCAGTGTGGGGTAGAGGCGAAGTACCGGCCTaGGGCCTGGGGCTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: AYLFQGNKRIHSKAVWGRGEVPA*GLGLRH
Trigger: ATGCCTGAGCCCCAGGCCCCAGGCCGGTACTTCGCC...TCTACCCCACACTGCTTTGCTGTGTATACGCTTGTTGCCCTGAAATAAATATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR GCA 90 bp CATATTTATTTCAGGGCAACAAGCGTATACACAGCAAAGCAGTGTGGGGTAGAGTGGACTTGCGGGGGTTaGCGAAGAAGCCGTCGCGGG +
Preference number: 4 (lower is better)
Translates to: HIYFRATSVYTAKQCGVEWTCGG*RRSRRG
Trigger: CCCGCGACGGCTTCTTCGGCAACCCCCGCAAGTCCA...CTCTACCCCACACTGCTTTGCTGTGTATACGCTTGTTGCCCTGAAATAAATATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp ATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCGAAGACGCTCACTTTaGGAGGCAGCTCAGCAATCA +
Preference number: 4 (lower is better)
Translates to: MQHLTPLTRLVCMHTQSGRRRSL*EAAQQS
Trigger: TGATTGCTGAGCTGCCTCCCAAAGTGAGCGTCTTCG...GCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGGCTCTCGGAGATGTTaGTGTGGGTTTTCACAGCTT +
Preference number: 4 (lower is better)
Translates to: ATSHPVDTVSLHAHTERPGSRRC*CGFSQL
Trigger: AAGCTGTGAAAACCCACACCAACATCTCCGAGAGCC...TGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAACACGTTGTACAGGGTaGGTTTACCGGTGGACTTGT +
Preference number: 4 (lower is better)
Translates to: ATSHPVDTVSLHAHTERPTRCTG*VYRWTC
Trigger: ACAAGTCCACCGGTAAACCCACCCTGTACAACGTGT...TGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp AAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGCCAGTCGCTCTCTTTaGTGGTCAGTGTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: KMQHLTPLTRLVCMHTQSASRSL*WSVCWS
Trigger: TGACCAGCACACTGACCATCAAAGAGAGCGACTGGC...GCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp AAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCTTGTTGCCGTTGGGGTaGTGGACTTTGCACACCACG +
Preference number: 4 (lower is better)
Translates to: KMQHLTPLTRLVCMHTQSLLPLG*WTLHTT
Trigger: CGTGGTGTGCAAAGTCCAGCACCCCAACGGCAACAA...GCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp ATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCTTGACACGGTTAGTTTaGATGCACACACAGAGCGGC +
Preference number: 4 (lower is better)
Translates to: MQHLTPLTRLVCMHTQSGLTRLV*MHTQSG
Trigger: GCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAA...GCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp CATATTTATTTCAGGGCAACAAGCGTATACACAGCAAAGCAGTGTGGGGTAGAGAAGCCAGCCAGCCCCTaGCGGTCGAGAAGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: HIYFRATSVYTAKQCGVEKPASP*RSRRKP
Trigger: AGGCTTCCTTCTCGACCGGCAGGGGCTGGCTGGCTT...CTCTACCCCACACTGCTTTGCTGTGTATACGCTTGTTGCCCTGAAATAAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp AAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCTTGCCGTTGGGGTGCTaGACTTTGCACACCACGTGT +
Preference number: 4 (lower is better)
Translates to: KMQHLTPLTRLVCMHTQSLPLGC*TLHTTC
Trigger: ACACGTGGTGTGCAAAGTCCAGCACCCCAACGGCAA...GCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp TTTTATAAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACAGCCTCAGCCTGCACCTaGTCCGTGGTGACGCCAGAC +
Preference number: 4 (lower is better)
Translates to: FYKMQHLTPLTRLVCMHTASACT*SVVTPD
Trigger: GTCTGGCGTCACCACGGACCAGGTGCAGGCTGAGGC...TGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTTATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp GATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGGGCTCTCGGAGATGTTaGTGTGGGTTTTCACAGCTT +
Preference number: 4 (lower is better)
Translates to: DATSHPVDTVSLHAHTERGSRRC*CGFSQL
Trigger: AAGCTGTGAAAACCCACACCAACATCTCCGAGAGCC...CCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp CATATTTATTTCAGGGCAACAAGCGTATACACAGCAAAGCAGTGTGGGGTAGAGCCTTGGGCCGGGAGATaGTCTGCTTCAGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: HIYFRATSVYTAKQCGVEPWAGR*SASVAR
Trigger: CCTCGCCACTGAAGCAGACCATCTCCCGGCCCAAGG...CTCTACCCCACACTGCTTTGCTGTGTATACGCTTGTTGCCCTGAAATAAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp TTTTATAAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACAAGGCAGCAGCACCTGTaGGGTGGCTGCGTACTTGCC +
Preference number: 4 (lower is better)
Translates to: FYKMQHLTPLTRLVCMHTRQQHL*GGCVLA
Trigger: GGCAAGTACGCAGCCACCTCACAGGTGCTGCTGCCT...TGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTTATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp ATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCTTTCTTTGTTGCCGTTaGGGTGCTGGACTTTGCACA +
Preference number: 4 (lower is better)
Translates to: MQHLTPLTRLVCMHTQSGFLCCR*GAGLCT
Trigger: TGTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAA...GCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp ATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCTCAGCAATCACTaGAAGAGGCACGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: MQHLTPLTRLVCMHTQSGQLSNH*KRHVLF
Trigger: GAAAAGAACGTGCCTCTTCCAGTGATTGCTGAGCTG...GCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp TTTTATAAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACTGCTCCCGGGCTGGTaGCAGCAAGTAGACATCGGG +
Preference number: 4 (lower is better)
Translates to: FYKMQHLTPLTRLVCMHTLLPGW*QQVDIG
Trigger: CCCGATGTCTACTTGCTGCCACCAGCCCGGGAGCAG...TGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTTATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp TTTTATAAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACAAGCCAACGGCCACGCTaGTCGTATCCGACGGGGAAT +
Preference number: 4 (lower is better)
Translates to: FYKMQHLTPLTRLVCMHTSQRPR*SYPTGN
Trigger: ATTCCCCGTCGGATACGAGCAGCGTGGCCGTTGGCT...TGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTTATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR GCA 90 bp TTTTATAAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACATCTTTGGCCTCAGCCTaGACCTGGTCCGTGGTGACG +
Preference number: 4 (lower is better)
Translates to: FYKMQHLTPLTRLVCMHTSLASA*TWSVVT
Trigger: CGTCACCACGGACCAGGTGCAGGCTGAGGCCAAAGA...TGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTTATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp TATTTATTTCAGGGCAACAAGCGTATACACAGCAAAGCAGTGTGGGGTAGAGCCTCACCTTGTAGGTCGTaGGCCCAGACTCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: YLFQGNKRIHSKAVWGRASPCRS*AQTLWP
Trigger: AGGCCAAAGAGTCTGGGCCCACGACCTACAAGGTGA...GGCTCTACCCCACACTGCTTTGCTGTGTATACGCTTGTTGCCCTGAAATAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp GCATATTTATTTCAGGGCAACAAGCGTATACACAGCAAAGCAGTGTGGGGTAGATGGCGAAGACCCGGATaGCTGTGTCTTGATCGGGGA +
Preference number: 4 (lower is better)
Translates to: AYLFQGNKRIHSKAVWGRWRRPG*LCLDRG
Trigger: TCCCCGATCAAGACACAGCCATCCGGGTCTTCGCCA...TCTACCCCACACTGCTTTGCTGTGTATACGCTTGTTGCCCTGAAATAAATATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CCA 90 bp GCATATTTATTTCAGGGCAACAAGCGTATACACAGCAAAGCAGTGTGGGGTAGACTGGGGCTCAGGCATTaGGGCGCTGGTCACATACTT +
Preference number: 4 (lower is better)
Translates to: AYLFQGNKRIHSKAVWGRLGLRH*GAGHIL
Trigger: AAGTATGTGACCAGCGCCCCAATGCCTGAGCCCCAG...TCTACCCCACACTGCTTTGCTGTGTATACGCTTGTTGCCCTGAAATAAATATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR TCA 90 bp TTTTATAAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACAAGGTGGTCAGGTCTGTaGCCAGGCAGGTCAACTTGG +
Preference number: 4 (lower is better)
Translates to: FYKMQHLTPLTRLVCMHTRWSGL*PGRSTW
Trigger: CCAAGTTGACCTGCCTGGTCACAGACCTGACCACCT...TGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTTATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp TTTTATAAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGGTGAACATGCTCTaGCCGAGCCAGTCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: FYKMQHLTPLTRLVCMHTQVNML*PSQSLS
Trigger: AGAGAGCGACTGGCTCGGCCAGAGCATGTTCACCTG...TGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTTATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CCA 90 bp TTTTATAAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACAACAGCTTCGCCATTCTaGCGGGTCCAGGAGATGGTC +
Preference number: 4 (lower is better)
Translates to: FYKMQHLTPLTRLVCMHTTASPF*RVQEMV
Trigger: GACCATCTCCTGGACCCGCCAGAATGGCGAAGCTGT...TGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTTATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR TCA 90 bp TTTTATAAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACAAGCCCCGGGTGCTGCTaGTGTCAGAGTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: FYKMQHLTPLTRLVCMHTSPGCC*CQSCSC
Trigger: ACAAGAACAACTCTGACATCAGCAGCACCCGGGGCT...TGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTTATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp TGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGGTGCAGGGCCACCCCCTaGGGCCGGGAGATGGTCTGC +
Preference number: 5 (lower is better)
Translates to: CMHTQSGQPPRACGQASRCRATP*GREMVC
Trigger: GCAGACCATCTCCCGGCCCAAGGGGGTGGCCCTGCA...CCTGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp GGAGGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCTGCAGGGCCACCCCCTaGGGCCGGGAGATGGTCTGC +
Preference number: 5 (lower is better)
Translates to: GGRAGKRNTCQQATQARTCRATP*GREMVC
Trigger: GCAGACCATCTCCCGGCCCAAGGGGGTGGCCCTGCA...GGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS CCA 90 bp CGTGATGGTGGCCGACTCCCGCAGGTTCAGCTGCTCCCGGGCTGGTaGCAGCAAGTAGACATCGGGCCTGTGCAGGGCCACCCCCTTGGG +
Preference number: 5 (lower is better)
Translates to: RDGGRLPQVQLLPGW*QQVDIGPVQGHPLG
Trigger: CCCAAGGGGGTGGCCCTGCACAGGCCCGATGTCTACTTGCTGCCACCAGCCCGGGAGCAGCTGAACCTGCGGGAGTCGGCCACCATCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS-3UTR CAA 90 bp TTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGTTGGACTTGCGGGGGTaGCCGAAGAAGCCGTCGCGG +
Preference number: 5 (lower is better)
Translates to: LHAHTERPAAPSLWAGQQLDLRG*PKKPSR
Trigger: CCGCGACGGCTTCTTCGGCAACCCCCGCAAGTCCAA...CTGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp GGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCATCCCCCTCGGTGGACTaGTCCACGGTCCTCTCGGTG +
Preference number: 5 (lower is better)
Translates to: GRAGKRNTCQQATQARTPSPSVD*STVLSV
Trigger: CACCGAGAGGACCGTGGACAAGTCCACCGAGGGGGA...TGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS TCA 90 bp TCGTGGGCCCAGACTCTTTGGCCTCAGCCTGCACCTGGTCCGTGGTaGCGCCAGACCCCACCTGCTTCCCCTCGCGCAGCCAGGACACCT +
Preference number: 5 (lower is better)
Translates to: SWAQTLWPQPAPGPW*RQTPPASPRAARTP
Trigger: AGGTGTCCTGGCTGCGCGAGGGGAAGCAGGTGGGGTCTGGCGTCACCACGGACCAGGTGCAGGCTGAGGCCAAAGAGTCTGGGCCCACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS TCA 90 bp ACTGCACGAAGACGTCCGCGGGAGAGAAGCCCGTCACCAGGCACGTaGTGGTGGCCGACTCCCGCAGGTTCAGCTGCTCCCGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: TARRRPRERSPSPGT*WWPTPAGSAAPGLV
Trigger: CACCAGCCCGGGAGCAGCTGAACCTGCGGGAGTCGGCCACCATCACGTGCCTGGTGACGGGCTTCTCTCCCGCGGACGTCTTCGTGCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CCA 90 bp GCACGTGATGGTGGCCGACTCCCGCAGGTTCAGCTGCTCCCGGGCTaGTGGCAGCAAGTAGACATCGGGCCTGTGCAGGGCCACCCCCTT +
Preference number: 5 (lower is better)
Translates to: ARDGGRLPQVQLLPG*WQQVDIGPVQGHPL
Trigger: AAGGGGGTGGCCCTGCACAGGCCCGATGTCTACTTGCTGCCACCAGCCCGGGAGCAGCTGAACCTGCGGGAGTCGGCCACCATCACGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS-3UTR CAA 90 bp AGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGGTGGGCCCAGACTCTTaGGCCTCAGCCTGCACCTGG +
Preference number: 5 (lower is better)
Translates to: SLHAHTERPAAPSLWAGQVGPDS*ASACTW
Trigger: CCAGGTGCAGGCTGAGGCCAAAGAGTCTGGGCCCAC...CTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp TTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCCTCTCGGTGACCCTGTaGGGCAGGGCCTCATGGGCC +
Preference number: 5 (lower is better)
Translates to: LVCMHTQSGQPPRACGQALSVTL*GRASWA
Trigger: GGCCCATGAGGCCCTGCCCAACAGGGTCACCGAGAG...GGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS CCA 90 bp CCTGTGCAGGGCCACCCCCTTGGGCCGGGAGATGGTCTGCTTCAGTaGCGAGGGCAGGTCTGTGTGGGTCACGGTGCACGTGAACCTCTC +
Preference number: 5 (lower is better)
Translates to: PVQGHPLGPGDGLLQ*RGQVCVGHGAREPL
Trigger: GAGAGGTTCACGTGCACCGTGACCCACACAGACCTGCCCTCGCCACTGAAGCAGACCATCTCCCGGCCCAAGGGGGTGGCCCTGCACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS-3UTR CAA 90 bp CCTGCCGGTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGCCTGGCAGATGAGCTaGGACTTGCGGGGGTTGCCG +
Preference number: 5 (lower is better)
Translates to: PAGREGSLCESTQLEAGRAWQMS*DLRGLP
Trigger: CGGCAACCCCCGCAAGTCCAAGCTCATCTGCCAGGC...CCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGACCGGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CAA 90 bp GGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGAGGTGGGCCCAGACTCTTaGGCCTCAGCCTGCACCTGG +
Preference number: 5 (lower is better)
Translates to: GKRNTCQQATQARTPDPEVGPDS*ASACTW
Trigger: CCAGGTGCAGGCTGAGGCCAAAGAGTCTGGGCCCAC...CTCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CAA 90 bp AGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCCTGGGGCTCAGGCATaGGGGCGCTGGTCACATACT +
Preference number: 5 (lower is better)
Translates to: SLHAHTERPAAPSLWAGQPGAQA*GRWSHT
Trigger: AGTATGTGACCAGCGCCCCAATGCCTGAGCCCCAGG...CTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp ACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCTCTCGGTGACCCTGTaGGGCAGGGCCTCATGGGCC +
Preference number: 5 (lower is better)
Translates to: TRLVCMHTQSGQPPRACGLSVTL*GRASWA
Trigger: GGCCCATGAGGCCCTGCCCAACAGGGTCACCGAGAG...CCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp GACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGTTGGACTTGCGGGGGTaGCCGAAGAAGCCGTCGCGG +
Preference number: 5 (lower is better)
Translates to: DTVSLHAHTERPAAPSLWLDLRG*PKKPSR
Trigger: CCGCGACGGCTTCTTCGGCAACCCCCGCAAGTCCAA...CCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp CCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCGCCTGGCAGATGAGCTaGGACTTGCGGGGGTTGCCG +
Preference number: 5 (lower is better)
Translates to: PVDTVSLHAHTERPAAPSAWQMS*DLRGLP
Trigger: CGGCAACCCCCGCAAGTCCAAGCTCATCTGCCAGGC...GCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp ACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGGCCTGGCAGATGAGCTaGGACTTGCGGGGGTTGCCG +
Preference number: 5 (lower is better)
Translates to: TRLVCMHTQSGQPPRACGAWQMS*DLRGLP
Trigger: CGGCAACCCCCGCAAGTCCAAGCTCATCTGCCAGGC...CCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp CCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCGTGGGCCCAGACTCTTaGGCCTCAGCCTGCACCTGG +
Preference number: 5 (lower is better)
Translates to: PVDTVSLHAHTERPAAPSVGPDS*ASACTW
Trigger: CCAGGTGCAGGCTGAGGCCAAAGAGTCTGGGCCCAC...GCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp CCCACCTCGTGGCCTGCAAGCCAGCCAGCCCCTGCCGGTCGAGAAGGAAGCCTGCCGGATGGCTGTGTCTaGATCGGGGACACACATGGA +
Preference number: 5 (lower is better)
Translates to: PTSWPASQPAPAGREGSLPDGCV*IGDTHG
Trigger: TCCATGTGTGTCCCCGATCAAGACACAGCCATCCGG...CAGGCTTCCTTCTCGACCGGCAGGGGCTGGCTGGCTTGCAGGCCACGAGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CAA 90 bp TTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCCCTGGGGCTCAGGCATaGGGGCGCTGGTCACATACT +
Preference number: 5 (lower is better)
Translates to: LVCMHTQSGQPPRACGQAPGAQA*GRWSHT
Trigger: AGTATGTGACCAGCGCCCCAATGCCTGAGCCCCAGG...GGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp GGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGAGCCTGGGGCTCAGGCATaGGGGCGCTGGTCACATACT +
Preference number: 5 (lower is better)
Translates to: GKRNTCQQATQARTPDPEPGAQA*GRWSHT
Trigger: AGTATGTGACCAGCGCCCCAATGCCTGAGCCCCAGG...CTCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CAA 90 bp TGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGGATGACCAGGGACACGTaGTACAGGGTGGGTTTACCG +
Preference number: 5 (lower is better)
Translates to: CMHTQSGQPPRACGQASRMTRDT*YRVGLP
Trigger: CGGTAAACCCACCCTGTACAACGTGTCCCTGGTCAT...CCTGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS GCA 90 bp GTCACATACTTCTCCGGGGACAAGGGCTGCCCCCTCTGCATCCACTaGACGAAGACGTCCGCGGGAGAGAAGCCCGTCACCAGGCACGTG +
Preference number: 5 (lower is better)
Translates to: VTYFSGDKGCPLCIH*TKTSAGEKPVTRHV
Trigger: CACGTGCCTGGTGACGGGCTTCTCTCCCGCGGACGTCTTCGTGCAGTGGATGCAGAGGGGGCAGCCCTTGTCCCCGGAGAAGTATGTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS-3UTR CAA 90 bp CGTGGCCTGCAAGCCAGCCAGCCCCTGCCGGTCGAGAAGGAAGCCTGTGTGAGACCCTGCATGACGTCCTaGGAAGGCAGCAGCACCTGT +
Preference number: 5 (lower is better)
Translates to: RGLQASQPLPVEKEACVRPCMTS*EGSSTC
Trigger: ACAGGTGCTGCTGCCTTCCAAGGACGTCATGCAGGG...TCTCACACAGGCTTCCTTCTCGACCGGCAGGGGCTGGCTGGCTTGCAGGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CAA 90 bp CCCACCTCGTGGCCTGCAAGCCAGCCAGCCCCTGCCGGTCGAGAAGGAAGCCTGGGCACGTTCTTTTCTTaGTTGCCGTTGGGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: PTSWPASQPAPAGREGSLGTFFS*LPLGCW
Trigger: CCAGCACCCCAACGGCAACAAAGAAAAGAACGTGCC...CAGGCTTCCTTCTCGACCGGCAGGGGCTGGCTGGCTTGCAGGCCACGAGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CAA 90 bp AGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGAGAAACACGTGCCTTGGACTTGCGGGGGTaGCCGAAGAAGCCGTCGCGG +
Preference number: 5 (lower is better)
Translates to: SLCESTQLEAGRGRETRALDLRG*PKKPSR
Trigger: CCGCGACGGCTTCTTCGGCAACCCCCGCAAGTCCAA...GGCACGTGTTTCTCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CAA 90 bp TTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCACAGATGAGCTTGGACTaGCGGGGGTTGCCGAAGAAG +
Preference number: 5 (lower is better)
Translates to: FACTHRAASRPEPVGRPAQMSLD*RGLPKK
Trigger: CTTCTTCGGCAACCCCCGCAAGTCCAAGCTCATCTG...TGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp TGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGGGTCAACTTGGTGGACTaGGTGAGGAAGATGCTGGCA +
Preference number: 5 (lower is better)
Translates to: CMHTQSGQPPRACGQASRVNLVD*VRKMLA
Trigger: TGCCAGCATCTTCCTCACCAAGTCCACCAAGTTGAC...CCTGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS TCA 90 bp GGGACACACATGGAGGACGCATTCTGCTGGAAGGTCAGGCCCCTGTaGTCCACGCGGCAGGTGAACATGCTCTGGCCGAGCCAGTCGCTC +
Preference number: 5 (lower is better)
Translates to: GTHMEDAFCWKVRPL*STRQVNMLWPSQSL
Trigger: GAGCGACTGGCTCGGCCAGAGCATGTTCACCTGCCGCGTGGATCACAGGGGCCTGACCTTCCAGCAGAATGCGTCCTCCATGTGTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CCA 90 bp TTCCTCTTCGGACACGGTCAGGATGCTGTGGGCGAAGTACCGGCCTaGGGCCTGGGGCTCAGGCATTGGGGCGCTGGTCACATACTTCTC +
Preference number: 5 (lower is better)
Translates to: FLFGHGQDAVGEVPA*GLGLRHWGAGHILL
Trigger: GAGAAGTATGTGACCAGCGCCCCAATGCCTGAGCCCCAGGCCCCAGGCCGGTACTTCGCCCACAGCATCCTGACCGTGTCCGAAGAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS-3UTR CAA 90 bp TTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCATTGGGGTGCTGGACTTaGCACACCACGTGTTCGTCT +
Preference number: 5 (lower is better)
Translates to: FACTHRAASRPEPVGRPALGCWT*HTTCSS
Trigger: AGACGAACACGTGGTGTGCAAAGTCCAGCACCCCAA...TGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp CCACCTCGTGGCCTGCAAGCCAGCCAGCCCCTGCCGGTCGAGAAGGAAGCCTGTTTGGGGTGCTGGACTTaGCACACCACGTGTTCGTCT +
Preference number: 5 (lower is better)
Translates to: PPRGLQASQPLPVEKEACLGCWT*HTTCSS
Trigger: AGACGAACACGTGGTGTGCAAAGTCCAGCACCCCAA...ACAGGCTTCCTTCTCGACCGGCAGGGGCTGGCTGGCTTGCAGGCCACGAGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CAA 90 bp GAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGAGGCCAGATGAGCTTGGACTaGCGGGGGTTGCCGAAGAAG +
Preference number: 5 (lower is better)
Translates to: EEKHVPTGHAGQDPRPGGQMSLD*RGLPKK
Trigger: CTTCTTCGGCAACCCCCGCAAGTCCAAGCTCATCTG...GCCTCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CAA 90 bp ACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCTGCAGGGCCACCCCCTaGGGCCGGGAGATGGTCTGC +
Preference number: 5 (lower is better)
Translates to: TSHPVDTVSLHAHTERPACRATP*GREMVC
Trigger: GCAGACCATCTCCCGGCCCAAGGGGGTGGCCCTGCA...GGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp TTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAATGACCAGGGACACGTaGTACAGGGTGGGTTTACCG +
Preference number: 5 (lower is better)
Translates to: FACTHRAASRPEPVGRPAMTRDT*YRVGLP
Trigger: CGGTAAACCCACCCTGTACAACGTGTCCCTGGTCAT...TGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS GCA 90 bp CCGTTGGGGTGCTGGACTTTGCACACCACGTGTTCGTCTGTGCCCTaGATGACGTCCTTGGAAGGCAGCAGCACCTGTGAGGTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: PLGCWTLHTTCSSVP*MTSLEGSSTCEVAA
Trigger: CGCAGCCACCTCACAGGTGCTGCTGCCTTCCAAGGACGTCATGCAGGGCACAGACGAACACGTGGTGTGCAAAGTCCAGCACCCCAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CCA 90 bp GATGAGCTTGGACTTGCGGGGGTTGCCGAAGAAGCCGTCGCGGGGTaGGACGAAGACGCTCACTTTGGGAGGCAGCTCAGCAATCACTGG +
Preference number: 5 (lower is better)
Translates to: DELGLAGVAEEAVAG*DEDAHFGRQLSNHW
Trigger: CCAGTGATTGCTGAGCTGCCTCCCAAAGTGAGCGTCTTCGTCCCACCCCGCGACGGCTTCTTCGGCAACCCCCGCAAGTCCAAGCTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS-3UTR CAA 90 bp TTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCTTGGGGTGCTGGACTTaGCACACCACGTGTTCGTCT +
Preference number: 5 (lower is better)
Translates to: LVCMHTQSGQPPRACGQALGCWT*HTTCSS
Trigger: AGACGAACACGTGGTGTGCAAAGTCCAGCACCCCAA...GGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp GGAGGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCTTTTCTTTGTTGCCGTaGGGGTGCTGGACTTTGCAC +
Preference number: 5 (lower is better)
Translates to: GGRAGKRNTCQQATQARTFSLLP*GCWTLH
Trigger: GTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAAA...GGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CAA 90 bp GTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCGGCACGTTCTTTTCTTaGTTGCCGTTGGGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: VSLHAHTERPAAPSLWAGGTFFS*LPLGCW
Trigger: CCAGCACCCCAACGGCAACAAAGAAAAGAACGTGCC...GCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp GAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGAGGCACCAGGCAGGTCAACTaGGTGGACTTGGTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: EEKHVPTGHAGQDPRPGGTRQVN*VDLVRK
Trigger: CTTCCTCACCAAGTCCACCAAGTTGACCTGCCTGGT...GCCTCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CAA 90 bp CGGGCGGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACTGGCTCTCGGAGATGTaGGTGTGGGTTTTCACAGCT +
Preference number: 5 (lower is better)
Translates to: RAGKRNTCQQATQARTPDWLSEM*VWVFTA
Trigger: AGCTGTGAAAACCCACACCAACATCTCCGAGAGCCA...GTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCCGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS TCA 90 bp TCTGCTTCAGTGGCGAGGGCAGGTCTGTGTGGGTCACGGTGCACGTaGACCTCTCCCCGGAATTCCAGTCATCCTCGCAGATGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: SASVARAGLCGSRCT*TSPRNSSHPRRCWP
Trigger: AGGCCAGCATCTGCGAGGATGACTGGAATTCCGGGGAGAGGTTCACGTGCACCGTGACCCACACAGACCTGCCCTCGCCACTGAAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS GCA 90 bp TGGAGTCGGGAAGGAAGTCCTGTGCGAGGCAGCCAACGGCCACGCTaGTCGTATCCGACGGGGAATTCTCACAGGAGACGAGGGGGAAAA +
Preference number: 5 (lower is better)
Translates to: WSREGSPVRGSQRPR*SYPTGNSHRRRGGK
Trigger: TTTTCCCCCTCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTGGCCGTTGGCTGCCTCGCACAGGACTTCCTTCCCGACTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS-3UTR CAA 90 bp GACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGACGAAGACGCTCACTTaGGGAGGCAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: DTVSLHAHTERPAAPSLWTKTLT*GGSSAI
Trigger: GATTGCTGAGCTGCCTCCCAAAGTGAGCGTCTTCGT...CCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp GTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGCAGATGAGCTTGGACTaGCGGGGGTTGCCGAAGAAG +
Preference number: 5 (lower is better)
Translates to: VDTVSLHAHTERPAAPSLQMSLD*RGLPKK
Trigger: CTTCTTCGGCAACCCCCGCAAGTCCAAGCTCATCTG...CAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp ACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGAGCCAGTCGCTCTCTTaGATGGTCAGTGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: TRLVCMHTQSGQPPRACGSQSLS*MVSVLV
Trigger: GACCAGCACACTGACCATCAAAGAGAGCGACTGGCT...CCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp GAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGAGGCGTCAACTTGGTGGACTaGGTGAGGAAGATGCTGGCA +
Preference number: 5 (lower is better)
Translates to: EEKHVPTGHAGQDPRPGGVNLVD*VRKMLA
Trigger: TGCCAGCATCTTCCTCACCAAGTCCACCAAGTTGAC...GCCTCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CAA 90 bp ACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGACCAGGCAGGTCAACTaGGTGGACTTGGTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: TRLVCMHTQSGQPPRACGTRQVN*VDLVRK
Trigger: CTTCCTCACCAAGTCCACCAAGTTGACCTGCCTGGT...CCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp GTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCTGGCTCTCGGAGATGTaGGTGTGGGTTTTCACAGCT +
Preference number: 5 (lower is better)
Translates to: VSLHAHTERPAAPSLWAGWLSEM*VWVFTA
Trigger: AGCTGTGAAAACCCACACCAACATCTCCGAGAGCCA...GCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp GTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCGTTGACACGGTTAGTTaGCATGCACACACAGAGCGG +
Preference number: 5 (lower is better)
Translates to: VSLHAHTERPAAPSLWAGVDTVS*HAHTER
Trigger: CCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAAC...GCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS TCA 90 bp TGGGGTGCTGGACTTTGCACACCACGTGTTCGTCTGTGCCCTGCATaGCGTCCTTGGAAGGCAGCAGCACCTGTGAGGTGGCTGCGTACT +
Preference number: 5 (lower is better)
Translates to: WGAGLCTPRVRLCPA*RPWKAAAPVRWLRT
Trigger: AGTACGCAGCCACCTCACAGGTGCTGCTGCCTTCCAAGGACGTCATGCAGGGCACAGACGAACACGTGGTGTGCAAAGTCCAGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS-3UTR CAA 90 bp TTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCACGTTCTTTTCTTTGTaGCCGTTGGGGTGCTGGACT +
Preference number: 5 (lower is better)
Translates to: LVCMHTQSGQPPRACGQATFFSL*PLGCWT
Trigger: AGTCCAGCACCCCAACGGCAACAAAGAAAAGAACGT...GGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp GTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGGGCACGTTCTTTTCTTaGTTGCCGTTGGGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: VDTVSLHAHTERPAAPSLGTFFS*LPLGCW
Trigger: CCAGCACCCCAACGGCAACAAAGAAAAGAACGTGCC...CAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp GTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGAGAAACACGTGCCAACAGGCACGAAGACGCTCACTTaGGGAGGCAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: VRAHNWRPGGEEKHVPTGTKTLT*GGSSAI
Trigger: GATTGCTGAGCTGCCTCCCAAAGTGAGCGTCTTCGT...GCCTGTTGGCACGTGTTTCTCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CAA 90 bp GTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGAGAGCCAGTCGCTCTCTTaGATGGTCAGTGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: VEKEACVRAHNWRPGGEESQSLS*MVSVLV
Trigger: GACCAGCACACTGACCATCAAAGAGAGCGACTGGCT...CTCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS CCA 90 bp GCAGGTCAACTTGGTGGACTTGGTGAGGAAGATGCTGGCAAAGGATaGGGGGATGGCGAAGACCCGGATGGCTGTGTCTTGATCGGGGAC +
Preference number: 5 (lower is better)
Translates to: AGQLGGLGEEDAGKG*GDGEDPDGCVLIGD
Trigger: GTCCCCGATCAAGACACAGCCATCCGGGTCTTCGCCATCCCCCCATCCTTTGCCAGCATCTTCCTCACCAAGTCCACCAAGTTGACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS-3UTR CAA 90 bp TTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCACTGCTGATGTCAGAGTaGTTCTTGTATTTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: FACTHRAASRPEPVGRPALLMSE*FLYFQE
Trigger: CTCCTGGAAATACAAGAACAACTCTGACATCAGCAG...TGCTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp ACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGTTTTCTTTGTTGCCGTaGGGGTGCTGGACTTTGCAC +
Preference number: 5 (lower is better)
Translates to: TRLVCMHTQSGQPPRACGFSLLP*GCWTLH
Trigger: GTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAAA...CCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp ACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGGTTTACCGGTGGACTaGTCCACGGTCCTCTCGGTG +
Preference number: 5 (lower is better)
Translates to: TSHPVDTVSLHAHTERPAGLPVD*STVLSV
Trigger: CACCGAGAGGACCGTGGACAAGTCCACCGGTAAACC...GGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp CACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGCAACATCTCACCCCGTaGACACGGTTAGTTTGCATG +
Preference number: 5 (lower is better)
Translates to: HPVDTVSLHAHTERPAAPQHLTP*TRLVCM
Trigger: CATGCAAACTAACCGTGTCAACGGGGTGAGATGTTG...CGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp CCCACCTCGTGGCCTGCAAGCCAGCCAGCCCCTGCCGGTCGAGAAGGAAGCCTGTCCGATGTTCTTCTGTaGGGATCATTTCACCTTGAA +
Preference number: 5 (lower is better)
Translates to: PTSWPASQPAPAGREGSLSDVLL*GSFHLE
Trigger: TTCAAGGTGAAATGATCCCAACAGAAGAACATCGGA...CAGGCTTCCTTCTCGACCGGCAGGGGCTGGCTGGCTTGCAGGCCACGAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS CCA 90 bp GGTTGCCGAAGAAGCCGTCGCGGGGTGGGACGAAGACGCTCACTTTaGGAGGCAGCTCAGCAATCACTGGAAGAGGCACGTTCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: GCRRSRRGVGRRRSL*EAAQQSLEEARSFL
Trigger: AAGAAAAGAACGTGCCTCTTCCAGTGATTGCTGAGCTGCCTCCCAAAGTGAGCGTCTTCGTCCCACCCCGCGACGGCTTCTTCGGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS-3UTR CAA 90 bp GTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGACGTTCTTTTCTTTGTaGCCGTTGGGGTGCTGGACT +
Preference number: 5 (lower is better)
Translates to: VDTVSLHAHTERPAAPSLTFFSL*PLGCWT
Trigger: AGTCCAGCACCCCAACGGCAACAAAGAAAAGAACGT...CAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp ACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCCCGGATGGCTGTGTCTaGATCGGGGACACACATGGA +
Preference number: 5 (lower is better)
Translates to: TSHPVDTVSLHAHTERPAPDGCV*IGDTHG
Trigger: TCCATGTGTGTCCCCGATCAAGACACAGCCATCCGG...GGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp AGTTTGCATGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGATGTCAGAGTTGTTCTaGTATTTCCAGGAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: SLHAHTERPAAPSLWAGQMSELF*YFQEKV
Trigger: CACTTTCTCCTGGAAATACAAGAACAACTCTGACAT...CTGGCCTGCCCACAGGCTCGGGGCGGCTGGCCGCTCTGTGTGTGCATGCAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp GATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCCTGCATGACGTCCTaGGAAGGCAGCAGCACCTGT +
Preference number: 5 (lower is better)
Translates to: DATSHPVDTVSLHAHTERPCMTS*EGSSTC
Trigger: ACAGGTGCTGCTGCCTTCCAAGGACGTCATGCAGGG...CCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp ACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCACGAAGACGCTCACTTaGGGAGGCAGCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: TSHPVDTVSLHAHTERPATKTLT*GGSSAI
Trigger: GATTGCTGAGCTGCCTCCCAAAGTGAGCGTCTTCGT...GGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp GGTCGAGAAGGAAGCCTGTGTGAGAGCACACAACTGGAGGCCGGGCGGGGAAGATGGGATCATTTCACCTaGAACAAGGTGACGGTGGTA +
Preference number: 5 (lower is better)
Translates to: GREGSLCESTQLEAGRGRWDHFT*NKVTVV
Trigger: TACCACCGTCACCTTGTTCAAGGTGAAATGATCCCA...TCTTCCCCGCCCGGCCTCCAGTTGTGTGCTCTCACACAGGCTTCCTTCTCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS CCA 90 bp CAGGACCCCAGACCCGGAGGCAGCGCCCCTTTGAGTTCCTCTCTCTaGTCTCCGATGTTCTTCTGTTGGGATCATTTCACCTTGAACAAG +
Preference number: 5 (lower is better)
Translates to: QDPRPGGSAPLSSSL*SPMFFCWDHFTLNK
Trigger: CTTGTTCAAGGTGAAATGATCCCAACAGAAGAACATCGGAGACCAGAGAGAGGAACTCAAAGGGGCGCTGCCTCCGGGTCTGGGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CAA 90 bp GGGGAAGAGAAACACGTGCCAACAGGCCACGCAGGCCAGGACCCCAGACCCGGAATGTCAGAGTTGTTCTaGTATTTCCAGGAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: GEEKHVPTGHAGQDPRPGMSELF*YFQEKV
Trigger: CACTTTCTCCTGGAAATACAAGAACAACTCTGACAT...TCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGTTGGCACGTGTTTCTCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CAA 90 bp GCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAACCAGGCAGGTCAACTaGGTGGACTTGGTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: ATSHPVDTVSLHAHTERPTRQVN*VDLVRK
Trigger: CTTCCTCACCAAGTCCACCAAGTTGACCTGCCTGGT...TGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp ACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCCAGCCTGGCTCTCGGAGATGTaGGTGTGGGTTTTCACAGCT +
Preference number: 5 (lower is better)
Translates to: TSHPVDTVSLHAHTERPAWLSEM*VWVFTA
Trigger: AGCTGTGAAAACCCACACCAACATCTCCGAGAGCCA...GGCTGGCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS GCA 90 bp GCAATCACTGGAAGAGGCACGTTCTTTTCTTTGTTGCCGTTGGGGTaGTGGACTTTGCACACCACGTGTTCGTCTGTGCCCTGCATGACG +
Preference number: 5 (lower is better)
Translates to: AITGRGTFFSLLPLG*WTLHTTCSSVPCMT
Trigger: CGTCATGCAGGGCACAGACGAACACGTGGTGTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAAAGAACGTGCCTCTTCCAGTGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS GCA 90 bp GAGGCAGCTCAGCAATCACTGGAAGAGGCACGTTCTTTTCTTTGTTaGCGTTGGGGTGCTGGACTTTGCACACCACGTGTTCGTCTGTGC +
Preference number: 5 (lower is better)
Translates to: EAAQQSLEEARSFLC*RWGAGLCTPRVRLC
Trigger: GCACAGACGAACACGTGGTGTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAAAGAACGTGCCTCTTCCAGTGATTGCTGAGCTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CCA 90 bp ATCACTGGAAGAGGCACGTTCTTTTCTTTGTTGCCGTTGGGGTGCTaGACTTTGCACACCACGTGTTCGTCTGTGCCCTGCATGACGTCC +
Preference number: 5 (lower is better)
Translates to: ITGRGTFFSLLPLGC*TLHTTCSSVPCMTS
Trigger: GGACGTCATGCAGGGCACAGACGAACACGTGGTGTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAAAGAACGTGCCTCTTCCAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CCA 90 bp GCTCAGCAATCACTGGAAGAGGCACGTTCTTTTCTTTGTTGCCGTTaGGGTGCTGGACTTTGCACACCACGTGTTCGTCTGTGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: AQQSLEEARSFLCCR*GAGLCTPRVRLCPA
Trigger: TGCAGGGCACAGACGAACACGTGGTGTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAAAGAACGTGCCTCTTCCAGTGATTGCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS-3UTR CAA 90 bp AAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCCCCTGCATGACGTCCTaGGAAGGCAGCAGCACCTGT +
Preference number: 5 (lower is better)
Translates to: KMQHLTPLTRLVCMHTQSPCMTS*EGSSTC
Trigger: ACAGGTGCTGCTGCCTTCCAAGGACGTCATGCAGGG...GCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp ATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGCAGCCAGTCGCTCTCTTaGATGGTCAGTGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: MQHLTPLTRLVCMHTQSGSQSLS*MVSVLV
Trigger: GACCAGCACACTGACCATCAAAGAGAGCGACTGGCT...GCCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp CATATTTATTTCAGGGCAACAAGCGTATACACAGCAAAGCAGTGTGGGGTAGAGCTCTCGGTGACCCTGTaGGGCAGGGCCTCATGGGCC +
Preference number: 5 (lower is better)
Translates to: HIYFRATSVYTAKQCGVELSVTL*GRASWA
Trigger: GGCCCATGAGGCCCTGCCCAACAGGGTCACCGAGAG...CTCTACCCCACACTGCTTTGCTGTGTATACGCTTGTTGCCCTGAAATAAATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS-3UTR CAA 90 bp AAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGTCAACTTGGTGGACTaGGTGAGGAAGATGCTGGCA +
Preference number: 5 (lower is better)
Translates to: KMQHLTPLTRLVCMHTQSVNLVD*VRKMLA
Trigger: TGCCAGCATCTTCCTCACCAAGTCCACCAAGTTGAC...GCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp AAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGTTGACACGGTTAGTTaGCATGCACACACAGAGCGG +
Preference number: 5 (lower is better)
Translates to: KMQHLTPLTRLVCMHTQSVDTVS*HAHTER
Trigger: CCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAAC...GCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp AAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCTTTTCTTTGTTGCCGTaGGGGTGCTGGACTTTGCAC +
Preference number: 5 (lower is better)
Translates to: KMQHLTPLTRLVCMHTQSFSLLP*GCWTLH
Trigger: GTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAAA...GCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp TTTTATAAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACAGGTTTACCGGTGGACTaGTCCACGGTCCTCTCGGTG +
Preference number: 5 (lower is better)
Translates to: FYKMQHLTPLTRLVCMHTGLPVD*STVLSV
Trigger: CACCGAGAGGACCGTGGACAAGTCCACCGGTAAACC...TGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTTATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp AAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCCAACATCTCACCCCGTaGACACGGTTAGTTTGCATG +
Preference number: 5 (lower is better)
Translates to: KMQHLTPLTRLVCMHTQSQHLTP*TRLVCM
Trigger: CATGCAAACTAACCGTGTCAACGGGGTGAGATGTTG...GCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp TTTTATAAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACCGGATGGCTGTGTCTaGATCGGGGACACACATGGA +
Preference number: 5 (lower is better)
Translates to: FYKMQHLTPLTRLVCMHTPDGCV*IGDTHG
Trigger: TCCATGTGTGTCCCCGATCAAGACACAGCCATCCGG...TGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTTATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp GATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCGGATGTCAGAGTTGTTCTaGTATTTCCAGGAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: DATSHPVDTVSLHAHTERMSELF*YFQEKV
Trigger: CACTTTCTCCTGGAAATACAAGAACAACTCTGACAT...CCGCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp AAGATGCAACATCTCACCCCGTTGACACGGTTAGTTTGCATGCACACACAGAGCCTGCTGATGTCAGAGTaGTTCTTGTATTTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: KMQHLTPLTRLVCMHTQSLLMSE*FLYFQE
Trigger: CTCCTGGAAATACAAGAACAACTCTGACATCAGCAG...GCTCTGTGTGTGCATGCAAACTAACCGTGTCAACGGGGTGAGATGTTGCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS-3UTR CAA 90 bp GCATATTTATTTCAGGGCAACAAGCGTATACACAGCAAAGCAGTGTGGGGTAGAACGTTCTTTTCTTTGTaGCCGTTGGGGTGCTGGACT +
Preference number: 5 (lower is better)
Translates to: AYLFQGNKRIHSKAVWGRTFFSL*PLGCWT
Trigger: AGTCCAGCACCCCAACGGCAACAAAGAAAAGAACGT...TCTACCCCACACTGCTTTGCTGTGTATACGCTTGTTGCCCTGAAATAAATATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS TCA 72 bp CCTCCCCCTCGGTGGACTTGTCCACGGTCCTCTCGGTaGCCCTGTTGGGCAGGGCCTCATGGGCCACCACGC +
Preference number: 6 (lower is better)
Translates to: PPPRWTCPRSSR*PCWAGPHGPPR
Trigger: GCGTGGTGGCCCATGAGGCCCTGCCCAACAGGGTCACCGAGAGGACCGTGGACAAGTCCACCGAGGGGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS CCA 72 bp GGTGGCCGACTCCCGCAGGTTCAGCTGCTCCCGGGCTaGTGGCAGCAAGTAGACATCGGGCCTGTGCAGGGC +
Preference number: 6 (lower is better)
Translates to: GGRLPQVQLLPG*WQQVDIGPVQG
Trigger: GCCCTGCACAGGCCCGATGTCTACTTGCTGCCACCAGCCCGGGAGCAGCTGAACCTGCGGGAGTCGGCCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CCA 72 bp GGACACGGTCAGGATGCTGTGGGCGAAGTACCGGCCTaGGGCCTGGGGCTCAGGCATTGGGGCGCTGGTCAC +
Preference number: 6 (lower is better)
Translates to: GHGQDAVGEVPA*GLGLRHWGAGH
Trigger: GTGACCAGCGCCCCAATGCCTGAGCCCCAGGCCCCAGGCCGGTACTTCGCCCACAGCATCCTGACCGTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS TCA 72 bp CAGACTCTTTGGCCTCAGCCTGCACCTGGTCCGTGGTaGCGCCAGACCCCACCTGCTTCCCCTCGCGCAGCC +
Preference number: 6 (lower is better)
Translates to: QTLWPQPAPGPW*RQTPPASPRAA
Trigger: GGCTGCGCGAGGGGAAGCAGGTGGGGTCTGGCGTCACCACGGACCAGGTGCAGGCTGAGGCCAAAGAGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS TCA 72 bp AGACGTCCGCGGGAGAGAAGCCCGTCACCAGGCACGTaGTGGTGGCCGACTCCCGCAGGTTCAGCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: RRPRERSPSPGT*WWPTPAGSAAP
Trigger: GGGAGCAGCTGAACCTGCGGGAGTCGGCCACCATCACGTGCCTGGTGACGGGCTTCTCTCCCGCGGACGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS GCA 72 bp CTGTGCAGGGCCACCCCCTTGGGCCGGGAGATGGTCTaGTTCAGTGGCGAGGGCAGGTCTGTGTGGGTCACG +
Preference number: 6 (lower is better)
Translates to: LCRATPLGREMV*FSGEGRSVWVT
Trigger: CGTGACCCACACAGACCTGCCCTCGCCACTGAAGCAGACCATCTCCCGGCCCAAGGGGGTGGCCCTGCACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CCA 72 bp GTCGTGGGCCCAGACTCTTTGGCCTCAGCCTGCACCTaGTCCGTGGTGACGCCAGACCCCACCTGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: VVGPDSLASACT*SVVTPDPTCFP
Trigger: GGGGAAGCAGGTGGGGTCTGGCGTCACCACGGACCAGGTGCAGGCTGAGGCCAAAGAGTCTGGGCCCACGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CCA 72 bp GGCCACCCCCTTGGGCCGGGAGATGGTCTGCTTCAGTaGCGAGGGCAGGTCTGTGTGGGTCACGGTGCACGT +
Preference number: 6 (lower is better)
Translates to: GHPLGPGDGLLQ*RGQVCVGHGAR
Trigger: ACGTGCACCGTGACCCACACAGACCTGCCCTCGCCACTGAAGCAGACCATCTCCCGGCCCAAGGGGGTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CAA 72 bp CCCGTGGCCTGGCAGATGAGCTTGGACTTGCGGGGGTaGCCGAAGAAGCCGTCGCGGGGTGGGACGAAGACG +
Preference number: 6 (lower is better)
Translates to: PVAWQMSLDLRG*PKKPSRGGTKT
Trigger: CGTCTTCGTCCCACCCCGCGACGGCTTCTTCGGCAACCCCCGCAAGTCCAAGCTCATCTGCCAGGCCACGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS GCA 72 bp TTCTCCGGGGACAAGGGCTGCCCCCTCTGCATCCACTaGACGAAGACGTCCGCGGGAGAGAAGCCCGTCACC +
Preference number: 6 (lower is better)
Translates to: FSGDKGCPLCIH*TKTSAGEKPVT
Trigger: GGTGACGGGCTTCTCTCCCGCGGACGTCTTCGTGCAGTGGATGCAGAGGGGGCAGCCCTTGTCCCCGGAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CCA 72 bp GGACTTGCGGGGGTTGCCGAAGAAGCCGTCGCGGGGTaGGACGAAGACGCTCACTTTGGGAGGCAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: GLAGVAEEAVAG*DEDAHFGRQLS
Trigger: GCTGAGCTGCCTCCCAAAGTGAGCGTCTTCGTCCCACCCCGCGACGGCTTCTTCGGCAACCCCCGCAAGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CAA 72 bp GGACTGAAACCCGTGGCCTGGCAGATGAGCTTGGACTaGCGGGGGTTGCCGAAGAAGCCGTCGCGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: GLKPVAWQMSLD*RGLPKKPSRGG
Trigger: CCCACCCCGCGACGGCTTCTTCGGCAACCCCCGCAAGTCCAAGCTCATCTGCCAGGCCACGGGTTTCAGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CAA 72 bp TGCCGGGGACTGAAACCCGTGGCCTGGCAGATGAGCTaGGACTTGCGGGGGTTGCCGAAGAAGCCGTCGCGG +
Preference number: 6 (lower is better)
Translates to: CRGLKPVAWQMS*DLRGLPKKPSR
Trigger: CCGCGACGGCTTCTTCGGCAACCCCCGCAAGTCCAAGCTCATCTGCCAGGCCACGGGTTTCAGTCCCCGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS TCA 72 bp TGGGTTTACCGGTGGACTTGTCCACGGTCCTCTCGGTaGCCCTGTTGGGCAGGGCCTCATGGGCCACCACGC +
Preference number: 6 (lower is better)
Translates to: WVYRWTCPRSSR*PCWAGPHGPPR
Trigger: GCGTGGTGGCCCATGAGGCCCTGCCCAACAGGGTCACCGAGAGGACCGTGGACAAGTCCACCGGTAAACCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS CCA 72 bp GTCAGGATGCTGTGGGCGAAGTACCGGCCTGGGGCCTaGGGCTCAGGCATTGGGGCGCTGGTCACATACTTC +
Preference number: 6 (lower is better)
Translates to: VRMLWAKYRPGA*GSGIGALVTYF
Trigger: GAAGTATGTGACCAGCGCCCCAATGCCTGAGCCCCAGGCCCCAGGCCGGTACTTCGCCCACAGCATCCTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CCA 72 bp GTGTTCCATTCCTCTTCGGACACGGTCAGGATGCTGTaGGCGAAGTACCGGCCTGGGGCCTGGGGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: VFHSSSDTVRML*AKYRPGAWGSG
Trigger: GCCTGAGCCCCAGGCCCCAGGCCGGTACTTCGCCCACAGCATCCTGACCGTGTCCGAAGAGGAATGGAACAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CAA 90 bp GGACTGAAACCCGTGGCCTGGCAGATGAGCTTGGACTTGCGGGGGTaGCCGAAGAAGCCGTCGCGGGGTGGGACGAAGACGCTCACTTTG +
Preference number: 6 (lower is better)
Translates to: GLKPVAWQMSLDLRG*PKKPSRGGTKTLTL
Trigger: CAAAGTGAGCGTCTTCGTCCCACCCCGCGACGGCTTCTTCGGCAACCCCCGCAAGTCCAAGCTCATCTGCCAGGCCACGGGTTTCAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CAA 90 bp ATGACGTCCTTGGAAGGCAGCAGCACCTGTGAGGTGGCTGCGTACTaGCCCCCTCTCAGGACTGATGGGAAGCCCCGGGTGCTGCTGATG +
Preference number: 6 (lower is better)
Translates to: MTSLEGSSTCEVAAY*PPLRTDGKPRVLLM
Trigger: CATCAGCAGCACCCGGGGCTTCCCATCAGTCCTGAGAGGGGGCAAGTACGCAGCCACCTCACAGGTGCTGCTGCCTTCCAAGGACGTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS TCA 72 bp ATGGAGGACGCATTCTGCTGGAAGGTCAGGCCCCTGTaGTCCACGCGGCAGGTGAACATGCTCTGGCCGAGC +
Preference number: 6 (lower is better)
Translates to: MEDAFCWKVRPL*STRQVNMLWPS
Trigger: GCTCGGCCAGAGCATGTTCACCTGCCGCGTGGATCACAGGGGCCTGACCTTCCAGCAGAATGCGTCCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CAA 90 bp GACATGACCAGGGACACGTTGTACAGGGTGGGTTTACCGGTGGACTaGTCCACGGTCCTCTCGGTGACCCTGTTGGGCAGGGCCTCATGG +
Preference number: 6 (lower is better)
Translates to: DMTRDTLYRVGLPVD*STVLSVTLLGRASW
Trigger: CCATGAGGCCCTGCCCAACAGGGTCACCGAGAGGACCGTGGACAAGTCCACCGGTAAACCCACCCTGTACAACGTGTCCCTGGTCATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS CAA 90 bp ACAGGCCACGCAGGCCAGGACCCCAGACCCGGAGGCAGCGCCCCTTaGAGTTCCTCTCTCTGGTCTCCGATGTTCTTCTGTTGGGATCAT +
Preference number: 6 (lower is better)
Translates to: TGHAGQDPRPGGSAP*SSSLWSPMFFCWDH
Trigger: ATGATCCCAACAGAAGAACATCGGAGACCAGAGAGAGGAACTCAAAGGGGCGCTGCCTCCGGGTCTGGGGTCCTGGCCTGCGTGGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637539.2
CDS GCA 72 bp GAAGGAAGTCCTGTGCGAGGCAGCCAACGGCCACGCTaGTCGTATCCGACGGGGAATTCTCACAGGAGACGA +
Preference number: 6 (lower is better)
Translates to: EGSPVRGSQRPR*SYPTGNSHRRR
Trigger: TCGTCTCCTGTGAGAATTCCCCGTCGGATACGAGCAGCGTGGCCGTTGGCTGCCTCGCACAGGACTTCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CAA 72 bp CACACCACGTGTTCGTCTGTGCCCTGCATGACGTCCTaGGAAGGCAGCAGCACCTGTGAGGTGGCTGCGTAC +
Preference number: 6 (lower is better)
Translates to: HTTCSSVPCMTS*EGSSTCEVAAY
Trigger: GTACGCAGCCACCTCACAGGTGCTGCTGCCTTCCAAGGACGTCATGCAGGGCACAGACGAACACGTGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CAA 72 bp AGGGACACGTTGTACAGGGTGGGTTTACCGGTGGACTaGTCCACGGTCCTCTCGGTGACCCTGTTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: RDTLYRVGLPVD*STVLSVTLLGR
Trigger: CCTGCCCAACAGGGTCACCGAGAGGACCGTGGACAAGTCCACCGGTAAACCCACCCTGTACAACGTGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS CAA 90 bp TGGACTTTGCACACCACGTGTTCGTCTGTGCCCTGCATGACGTCCTaGGAAGGCAGCAGCACCTGTGAGGTGGCTGCGTACTTGCCCCCT +
Preference number: 6 (lower is better)
Translates to: WTLHTTCSSVPCMTS*EGSSTCEVAAYLPP
Trigger: AGGGGGCAAGTACGCAGCCACCTCACAGGTGCTGCTGCCTTCCAAGGACGTCATGCAGGGCACAGACGAACACGTGGTGTGCAAAGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS TCA 72 bp GGACTTTGCACACCACGTGTTCGTCTGTGCCCTGCATaGCGTCCTTGGAAGGCAGCAGCACCTGTGAGGTGG +
Preference number: 6 (lower is better)
Translates to: GLCTPRVRLCPA*RPWKAAAPVRW
Trigger: CCACCTCACAGGTGCTGCTGCCTTCCAAGGACGTCATGCAGGGCACAGACGAACACGTGGTGTGCAAAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CAA 72 bp CAGGTGCCAGCTGTGTCGGACATGACCAGGGACACGTaGTACAGGGTGGGTTTACCGGTGGACTTGTCCACG +
Preference number: 6 (lower is better)
Translates to: QVPAVSDMTRDT*YRVGLPVDLST
Trigger: CGTGGACAAGTCCACCGGTAAACCCACCCTGTACAACGTGTCCCTGGTCATGTCCGACACAGCTGGCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000390559.6
ENST00000626472.2
CDS CAA 90 bp GGGTTGCCGAAGAAGCCGTCGCGGGGTGGGACGAAGACGCTCACTTaGGGAGGCAGCTCAGCAATCACTGGAAGAGGCACGTTCTTTTCT +
Preference number: 6 (lower is better)
Translates to: GLPKKPSRGGTKTLT*GGSSAITGRGTFFS
Trigger: AGAAAAGAACGTGCCTCTTCCAGTGATTGCTGAGCTGCCTCCCAAAGTGAGCGTCTTCGTCCCACCCCGCGACGGCTTCTTCGGCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS GCA 72 bp TGCTGGACTTTGCACACCACGTGTTCGTCTGTGCCCTaGATGACGTCCTTGGAAGGCAGCAGCACCTGTGAG +
Preference number: 6 (lower is better)
Translates to: CWTLHTTCSSVP*MTSLEGSSTCE
Trigger: CTCACAGGTGCTGCTGCCTTCCAAGGACGTCATGCAGGGCACAGACGAACACGTGGTGTGCAAAGTCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CCA 72 bp CTTGGTGGACTTGGTGAGGAAGATGCTGGCAAAGGATaGGGGGATGGCGAAGACCCGGATGGCTGTGTCTTG +
Preference number: 6 (lower is better)
Translates to: LGGLGEEDAGKG*GDGEDPDGCVL
Trigger: CAAGACACAGCCATCCGGGTCTTCGCCATCCCCCCATCCTTTGCCAGCATCTTCCTCACCAAGTCCACCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CCA 72 bp AGAGGCACGTTCTTTTCTTTGTTGCCGTTGGGGTGCTaGACTTTGCACACCACGTGTTCGTCTGTGCCCTGC +
Preference number: 6 (lower is better)
Translates to: RGTFFSLLPLGC*TLHTTCSSVPC
Trigger: GCAGGGCACAGACGAACACGTGGTGTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAAAGAACGTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CAA 90 bp GGAAGAGGCACGTTCTTTTCTTTGTTGCCGTTGGGGTGCTGGACTTaGCACACCACGTGTTCGTCTGTGCCCTGCATGACGTCCTTGGAA +
Preference number: 6 (lower is better)
Translates to: GRGTFFSLLPLGCWT*HTTCSSVPCMTSLE
Trigger: TTCCAAGGACGTCATGCAGGGCACAGACGAACACGTGGTGTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAAAGAACGTGCCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CAA 90 bp AGCTCAGCAATCACTGGAAGAGGCACGTTCTTTTCTTTGTTGCCGTaGGGGTGCTGGACTTTGCACACCACGTGTTCGTCTGTGCCCTGC +
Preference number: 6 (lower is better)
Translates to: SSAITGRGTFFSLLP*GCWTLHTTCSSVPC
Trigger: GCAGGGCACAGACGAACACGTGGTGTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAAAGAACGTGCCTCTTCCAGTGATTGCTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CAA 90 bp GGAGGCAGCTCAGCAATCACTGGAAGAGGCACGTTCTTTTCTTTGTaGCCGTTGGGGTGCTGGACTTTGCACACCACGTGTTCGTCTGTG +
Preference number: 6 (lower is better)
Translates to: GGSSAITGRGTFFSL*PLGCWTLHTTCSSV
Trigger: CACAGACGAACACGTGGTGTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAAAGAACGTGCCTCTTCCAGTGATTGCTGAGCTGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS TCA 72 bp CCCCTCTCAGGACTGATGGGAAGCCCCGGGTGCTGCTaGTGTCAGAGTTGTTCTTGTATTTCCAGGAGAAAG +
Preference number: 6 (lower is better)
Translates to: PLSGLMGSPGCC*CQSCSCISRRK
Trigger: CTTTCTCCTGGAAATACAAGAACAACTCTGACATCAGCAGCACCCGGGGCTTCCCATCAGTCCTGAGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CAA 72 bp ACGTTCTTTTCTTTGTTGCCGTTGGGGTGCTGGACTTaGCACACCACGTGTTCGTCTGTGCCCTGCATGACG +
Preference number: 6 (lower is better)
Translates to: TFFSLLPLGCWT*HTTCSSVPCMT
Trigger: CGTCATGCAGGGCACAGACGAACACGTGGTGTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAAAGAACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CAA 90 bp CCTCTCAGGACTGATGGGAAGCCCCGGGTGCTGCTGATGTCAGAGTaGTTCTTGTATTTCCAGGAGAAAGTGATGGAGTCGGGAAGGAAG +
Preference number: 6 (lower is better)
Translates to: PLRTDGKPRVLLMSE*FLYFQEKVMESGRK
Trigger: CTTCCTTCCCGACTCCATCACTTTCTCCTGGAAATACAAGAACAACTCTGACATCAGCAGCACCCGGGGCTTCCCATCAGTCCTGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CCA 72 bp TCACTGGAAGAGGCACGTTCTTTTCTTTGTTGCCGTTaGGGTGCTGGACTTTGCACACCACGTGTTCGTCTG +
Preference number: 6 (lower is better)
Translates to: SLEEARSFLCCR*GAGLCTPRVRL
Trigger: CAGACGAACACGTGGTGTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAAAGAACGTGCCTCTTCCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CAA 72 bp AGCTCAGCAATCACTGGAAGAGGCACGTTCTTTTCTTaGTTGCCGTTGGGGTGCTGGACTTTGCACACCACG +
Preference number: 6 (lower is better)
Translates to: SSAITGRGTFFS*LPLGCWTLHTT
Trigger: CGTGGTGTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAAAGAACGTGCCTCTTCCAGTGATTGCTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CAA 72 bp ATCACTGGAAGAGGCACGTTCTTTTCTTTGTTGCCGTaGGGGTGCTGGACTTTGCACACCACGTGTTCGTCT +
Preference number: 6 (lower is better)
Translates to: ITGRGTFFSLLP*GCWTLHTTCSS
Trigger: AGACGAACACGTGGTGTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAAAGAACGTGCCTCTTCCAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2
CDS CAA 72 bp TCAGCAATCACTGGAAGAGGCACGTTCTTTTCTTTGTaGCCGTTGGGGTGCTGGACTTTGCACACCACGTGT +
Preference number: 6 (lower is better)
Translates to: SAITGRGTFFSL*PLGCWTLHTTC
Trigger: ACACGTGGTGTGCAAAGTCCAGCACCCCAACGGCAACAAAGAAAAGAACGTGCCTCTTCCAGTGATTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000390559.6
ENST00000626472.2
ENST00000637539.2