Pregenerated sensors for IGBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000089289

Ensembl transcript IDs: ENST00000342206.10, ENST00000356413.5

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AGAAGAATTAGGCGAGCGCGGACAAAACCGGAAGAAGCACCTCATTaGTCCAGTAGCTTCACTGTTAACAAAGCATCAAAGGACTTCCGG	+
Preference number: 5 (lower is better) Translates to: RRIRRARTKPEEAPH*SSSFTVNKASKDFR Trigger: CCGGAAGTCCTTTGATGCTTTGTTAACAGTGAAGCTACTGGACCAATGAGGTGCTTCTTCCGGTTTTGTCCGCGCTCGCCTAATTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000342206.10 ENST00000356413.5
CDS TCA 72 bp	CGTCGCCGACACGGGGCTGAGAAGTTCTGTGGGCTCTaGAGCCCGGGTGAGGCGAGGCTGAATTCGGAGCGC	+
Preference number: 6 (lower is better) Translates to: RRRHGAEKFCGL*SPGEARLNSER Trigger: GCGCTCCGAATTCAGCCTCGCCTCACCCGGGCTTCAGAGCCCACAGAACTTCTCAGCCCCGTGTCGGCGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342206.10
CDS TCA 72 bp	AGTTCTGTGGGCTCTGAAGCCCGGGTGAGGCGAGGCTaGATTCGGAGCGCGAGGAGTGCGGACGAGCGAGTG	+
Preference number: 6 (lower is better) Translates to: SSVGSEARVRRG*IRSARSADERV Trigger: CACTCGCTCGTCCGCACTCCTCGCGCTCCGAATTCAGCCTCGCCTCACCCGGGCTTCAGAGCCCACAGAACT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342206.10
CDS GCA 72 bp	GCTGAATTCGGAGCGCGAGGAGTGCGGACGAGCGAGTaGGTTTTAGGAGCCAGTCTGGCGCGCCCCTTACCT	+
Preference number: 6 (lower is better) Translates to: AEFGARGVRTSE*VLGASLARPLP Trigger: AGGTAAGGGGCGCGCCAGACTGGCTCCTAAAACGCACTCGCTCGTCCGCACTCCTCGCGCTCCGAATTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342206.10
CDS CCA 72 bp	AGGCGAGCGCGGACAAAACCGGAAGAAGCACCTCATTaGTCCAGTAGCTTCACTGTTAACAAAGCATCAAAG	+
Preference number: 6 (lower is better) Translates to: RRARTKPEEAPH*SSSFTVNKASK Trigger: CTTTGATGCTTTGTTAACAGTGAAGCTACTGGACCAATGAGGTGCTTCTTCCGGTTTTGTCCGCGCTCGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000342206.10 ENST00000356413.5

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