Pregenerated sensors for IFNL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000182393Ensembl transcript IDs: ENST00000333625.3
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATAAAGGGGGCCCTGCTGTGGGCTaGGGCTGGATACAGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TINSALCLSQGCSFINKGGPAVG*GWIQAW Trigger: CCAGGCCTGTATCCAGCCTCAGCCCACAGCAGGGCC...CCCTTTATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR CCA 90 bp | ACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATAAAGGGGGGCGCTCCCTCACCTaGAGAAGCCTCAGGTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: TINSALCLSQGCSFINKGGRSLT*RSLRSQ Trigger: TTGGGACCTGAGGCTTCTCCAGGTGAGGGAGCGCCC...CCCTTTATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR TCA 90 bp | AGTAAAACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATCGTCCCTGGCCTTCTTaGAGCTCGCTAGCTCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: SKTINSALCLSQGCSFINRPWPS*SSLAPV Trigger: CACAGGAGCTAGCGAGCTTCAAGAAGGCCAGGGACG...ATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGTTTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR CCA 90 bp | AGTAAAACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATGTGTGGGGTGTCAGGTaGACTCAGGGTGGGTTGACG | + |
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Preference number: 4 (lower is better) Translates to: SKTINSALCLSQGCSFINVWGVR*TQGGLT Trigger: CGTCAACCCACCCTGAGTCCACCTGACACCCCACAC...ATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGTTTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR CCA 90 bp | AGTAAAACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATCCTTCCCAGTTGTGGTaGGCTTGGAAGTGGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: SKTINSALCLSQGCSFINPSQLW*AWKWGQ Trigger: CTGTCCCCACTTCCAAGCCCACCACAACTGGGAAGG...ATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGTTTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR CCA 90 bp | AGTAAAACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATAGCCCTTCCCAGTTGTaGTGGGCTTGGAAGTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: SKTINSALCLSQGCSFINSPSQL*WAWKWG Trigger: TCCCCACTTCCAAGCCCACCACAACTGGGAAGGGCT...ATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGTTTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR CCA 90 bp | ACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATAAAGGGTTGAACCTGCCAATGTaGCAGCCCTTCCCAGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: TINSALCLSQGCSFINKGLNLPM*QPFPVV Trigger: CACAACTGGGAAGGGCTGCCACATTGGCAGGTTCAA...CCCTTTATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR TCA 90 bp | AGTAAAACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATGGACTCAGGGTGGGTTaGCGTTCTCAGACACAGGTT | + |
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Preference number: 4 (lower is better) Translates to: SKTINSALCLSQGCSFINGLRVG*RSQTQV Trigger: AACCTGTGTCTGAGAACGTCAACCCACCCTGAGTCC...ATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGTTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR CCA 90 bp | AGTAAAACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATCAGGTGGACTCAGGGTaGGTTGACGTTCTCAGACAC | + |
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Preference number: 4 (lower is better) Translates to: SKTINSALCLSQGCSFINQVDSG*VDVLRH Trigger: GTGTCTGAGAACGTCAACCCACCCTGAGTCCACCTG...ATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGTTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR CCA 90 bp | ACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATAAAGGGCGCATAAATAAGGTGTaGGGTGTCAGGTGGACTCAG | + |
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Preference number: 4 (lower is better) Translates to: TINSALCLSQGCSFINKGRINKV*GVRWTQ Trigger: CTGAGTCCACCTGACACCCCACACCTTATTTATGCG...CCCTTTATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR TCA 90 bp | AGTAAAACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATGTGGTGACAGAGATTTaGACCTGCCAATGTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SKTINSALCLSQGCSFINVVTEI*TCQCGS Trigger: GCTGCCACATTGGCAGGTTCAAATCTCTGTCACCAC...ATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGTTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR GCA 90 bp | ACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATAAAGGGGGAAGACAGGAGAGCTaGAACTCCAGTTTTTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: TINSALCLSQGCSFINKGGRQES*NSSFSA Trigger: AGCTGAAAAACTGGAGTTGCAGCTCTCCTGTCTTCC...CCCTTTATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR TCA 90 bp | AGTAAAACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATGTTTTTCAGCTTGAGTaGCTCTTCCAAGGCGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: SKTINSALCLSQGCSFINVFQLE*LFQGVP Trigger: AGGGACGCCTTGGAAGAGTCACTCAAGCTGAAAAAC...ATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGTTTTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR TCA 90 bp | AGTAAAACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATTCCAGTTTTTCAGCTTaGGTGACTCTTCCAAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: SKTINSALCLSQGCSFINSSFSA*VTLPRR Trigger: ACGCCTTGGAAGAGTCACTCAAGCTGAAAAACTGGA...ATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGTTTTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR GCA 90 bp | AGTAAAACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATTGTCTCAGTCAGGGCTaGAGCTTCATAAATAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SKTINSALCLSQGCSFINCLSQG*SFINKG Trigger: CCCTTTATTTATGAAGCTGCAGCCCTGACTGAGACA...ATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGTTTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS CCA 90 bp | GGAAGGAGTAGGGCTCAGCGCATAAATAAGGTGTGGGGTGTCAGGTaGACTCAGGGTGGGTTGACGTTCTCAGACACAGGTTCCCATCGG | + |
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Preference number: 5 (lower is better) Translates to: GRSRAQRINKVWGVR*TQGGLTFSDTGSHR Trigger: CCGATGGGAACCTGTGTCTGAGAACGTCAACCCACCCTGAGTCCACCTGACACCCCACACCTTATTTATGCGCTGAGCCCTACTCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR CAA 90 bp | ACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATAAAGGGCCAGCGGACTCCTTTTaGGGGGCCTCCTGGAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: TINSALCLSQGCSFINKGPADSF*GASWSR Trigger: CCGGCTCCAGGAGGCCCCCAAAAAGGAGTCCGCTGG...CCCTTTATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR CAA 90 bp | ACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATAAAGGGGGCAGCCCTTCCCAGTaGTGGTGGGCTTGGAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: TINSALCLSQGCSFINKGGSPSQ*WWAWKW Trigger: CCACTTCCAAGCCCACCACAACTGGGAAGGGCTGCC...CCCTTTATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR CAA 90 bp | ACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATAAAGGGGCGTCCCTGGCCTTCTaGAAGCTCGCTAGCTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: TINSALCLSQGCSFINKGASLAF*KLASSC Trigger: ACAGGAGCTAGCGAGCTTCAAGAAGGCCAGGGACGC...CCCTTTATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR CAA 90 bp | ACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATAAAGGGTGGACTCAGGGTGGGTaGACGTTCTCAGACACAGGT | + |
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Preference number: 5 (lower is better) Translates to: TINSALCLSQGCSFINKGWTQGG*TFSDTG Trigger: ACCTGTGTCTGAGAACGTCAACCCACCCTGAGTCCA...CCCTTTATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR CAA 90 bp | AGTAAAACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATCCATCGGCCACATATTaGAGGTCTCGCGTGAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: SKTINSALCLSQGCSFINPSATY*RSRVRR Trigger: CCTCCTCACGCGAGACCTCAAATATGTGGCCGATGG...ATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGTTTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR CAA 90 bp | AGTAAAACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATTGTGGTGACAGAGATTaGAACCTGCCAATGTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: SKTINSALCLSQGCSFINCGDRD*NLPMWQ Trigger: CTGCCACATTGGCAGGTTCAAATCTCTGTCACCACA...ATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGTTTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS-3UTR CAA 90 bp | AGTAAAACAATAAACTCAGCCCTATGTCTCAGTCAGGGCTGCAGCTTCATAAATCTCCAGTTTTTCAGCTaGAGTGACTCTTCCAAGGCG | + |
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Preference number: 5 (lower is better) Translates to: SKTINSALCLSQGCSFINLQFFS*SDSSKA Trigger: CGCCTTGGAAGAGTCACTCAAGCTGAAAAACTGGAG...ATTTATGAAGCTGCAGCCCTGACTGAGACATAGGGCTGAGTTTATTGTTTTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS TCA 72 bp | ATAAGGTGTGGGGTGTCAGGTGGACTCAGGGTGGGTTaGCGTTCTCAGACACAGGTTCCCATCGGCCACATA | + |
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Preference number: 6 (lower is better) Translates to: IRCGVSGGLRVG*RSQTQVPIGHI Trigger: TATGTGGCCGATGGGAACCTGTGTCTGAGAACGTCAACCCACCCTGAGTCCACCTGACACCCCACACCTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS CCA 72 bp | AGGGCTCAGCGCATAAATAAGGTGTGGGGTGTCAGGTaGACTCAGGGTGGGTTGACGTTCTCAGACACAGGT | + |
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Preference number: 6 (lower is better) Translates to: RAQRINKVWGVR*TQGGLTFSDTG Trigger: ACCTGTGTCTGAGAACGTCAACCCACCCTGAGTCCACCTGACACCCCACACCTTATTTATGCGCTGAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS CAA 72 bp | AATAAGGTGTGGGGTGTCAGGTGGACTCAGGGTGGGTaGACGTTCTCAGACACAGGTTCCCATCGGCCACAT | + |
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Preference number: 6 (lower is better) Translates to: NKVWGVRWTQGG*TFSDTGSHRPH Trigger: ATGTGGCCGATGGGAACCTGTGTCTGAGAACGTCAACCCACCCTGAGTCCACCTGACACCCCACACCTTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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| CDS CAA 72 bp | AGCTTGAGTGACTCTTCCAAGGCGTCCCTGGCCTTCTaGAAGCTCGCTAGCTCCTGTGGTGACAGAGATTTG | + |
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Preference number: 6 (lower is better) Translates to: SLSDSSKASLAF*KLASSCGDRDL Trigger: CAAATCTCTGTCACCACAGGAGCTAGCGAGCTTCAAGAAGGCCAGGGACGCCTTGGAAGAGTCACTCAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333625.3 |
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