RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IFI44L (Homo sapiens)

Ensembl gene IDs: ENSG00000137959

Ensembl transcript IDs: ENST00000370751.10, ENST00000450498.1, ENST00000459784.6, ENST00000462041.1, ENST00000474002.1, ENST00000476521.5, ENST00000476876.6, ENST00000486882.5, ENST00000494910.2, ENST00000679651.1, ENST00000679848.1, ENST00000679998.1, ENST00000680110.1, ENST00000680295.1, ENST00000681501.1, ENST00000681613.1

Found 396 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATCTCAAATaGAGGGCTGTAACGCTCTCTCAATTGCACCAGTTTCCTCAAGAG +
Preference number: 1 (lower is better)
Translates to: VQAGPNVRIKATYLK*RAVTLSQLHQFPQE
Trigger: CTCTTGAGGAAACTGGTGCAATTGAGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476521.5
ENST00000681501.1
3UTR CCA 90 bp GTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTaGCCTTTGAACTTGAGATATGACTGTTCCAAGGACAGAAGGCAA +
Preference number: 1 (lower is better)
Translates to: VVCSRTYLSPPLLRF*PLNLRYDCSKDRRQ
Trigger: TTGCCTTCTGTCCTTGGAACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR TCA 90 bp GTGTTGAGGAAGGAAGTGGGATTGTGGGAGGGTACAGCTGAACATTaGCTGTACTTCTATATCCATGATCTCACTGGCCCATTTTCTCCA +
Preference number: 1 (lower is better)
Translates to: VLRKEVGLWEGTAEH*LYFYIHDLTGPFSP
Trigger: TGGAGAAAATGGGCCAGTGAGATCATGGATATAGAAGTACAGTCAATGTTCAGCTGTACCCTCCCACAATCCCACTTCCTTCCTCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR GCA 90 bp TCATTGTTTCTCTCTCTTGATCTCTCCTTCACTCCTTCTCTTCCTTaGAGGATCTCCAACTCCTTCATAAGGGCACTCTGTGTTACCCCT +
Preference number: 1 (lower is better)
Translates to: SLFLSLDLSFTPSLP*RISNSFIRALCVTP
Trigger: AGGGGTAACACAGAGTGCCCTTATGAAGGAGTTGGAGATCCTGCAAGGAAGAGAAGGAGTGAAGGAGAGATCAAGAGAGAGAAACAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR CCA 90 bp ATGTCACAGAAACTGAATTGTAAATGGTACGGAAATATGGAGGGGTaGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTTT +
Preference number: 1 (lower is better)
Translates to: MSQKLNCKWYGNMEG*FAVGPILAHRFSGF
Trigger: AAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCATTTACAATTCAGTTTCTGTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR CCA 90 bp GTGCCCTCAATTTTTGCAATTTTGCCTACACTGCACTTCCTGTCCTaGAGCCTGAAACAGTCTGAGTCTATTTGTTTGAATTGTGTTGAG +
Preference number: 1 (lower is better)
Translates to: VPSIFAILPTLHFLS*SLKQSESICLNCVE
Trigger: CTCAACACAATTCAAACAAATAGACTCAGACTGTTTCAGGCTCCAGGACAGGAAGTGCAGTGTAGGCAAAATTGCAAAAATTGAGGGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR TCA 90 bp TGCAGAGAGGATGAGAATATCCTTCATGGGGTCCAGTTCCAAATCTaGAGCATAATTTCCAACCATCAAAATATTGGAAATAGGAATGCC +
Preference number: 1 (lower is better)
Translates to: CREDENILHGVQFQI*SIISNHQNIGNRNA
Trigger: GGCATTCCTATTTCCAATATTTTGATGGTTGGAAATTATGCTTCAGATTTGGAACTGGACCCCATGAAGGATATTCTCATCCTCTCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476521.5
3UTR CCA 90 bp TTCCTCCAGTGGTTTAAAAAGATGTCACAGAAACTGAATTGTAAATaGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTA +
Preference number: 1 (lower is better)
Translates to: FLQWFKKMSQKLNCK*YGNMEGWFAVGPIL
Trigger: TAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCATTTACAATTCAGTTTCTGTGACATCTTTTTAAACCACTGGAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR GCA 90 bp TATAAATTGCTCTCTGTATCAAATTCCAGGAAAATGAAGATAATGTaGAAGGCAGCTAGTCGGGAACAAAATGACTTTAAACAATTGCCC +
Preference number: 1 (lower is better)
Translates to: YKLLSVSNSRKMKIM*KAASREQNDFKQLP
Trigger: GGGCAATTGTTTAAAGTCATTTTGTTCCCGACTAGCTGCCTTGCACATTATCTTCATTTTCCTGGAATTTGATACAGAGAGCAATTTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR TCA 90 bp TGCAAGGGTGTACAATTGGTATGCAAGTTTTTATCCTCCTTACATTaGTGGCAAAAATCAGATCTATTTAATCTACTGTCCTCCACAAAT +
Preference number: 1 (lower is better)
Translates to: CKGVQLVCKFLSSLH*WQKSDLFNLLSSTN
Trigger: ATTTGTGGAGGACAGTAGATTAAATAGATCTGATTTTTGCCATCAATGTAAGGAGGATAAAAACTTGCATACCAATTGTACACCCTTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR-3UTR TCA 90 bp CTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACGCTGTCAATAGAGATTaGCTCTCATTGCGGCACACC +
Preference number: 2 (lower is better)
Translates to: LSLRHTSTGWAKCQNQGNAVNRD*LSLRHT
Trigger: GGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGC...GTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR TCA 90 bp AGCAGGCTGTCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGGCTGTCAATAGAGATTaGCTCTCATTGCGGCACACC +
Preference number: 2 (lower is better)
Translates to: SRLSIEIDSHCGTPVQAGAVNRD*LSLRHT
Trigger: GGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGC...CCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR TCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTGCTGTCAATAGAGATTaGCTCTCATTGCGGCACACC +
Preference number: 2 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGAVNRD*LSLRHT
Trigger: GGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGC...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR TCA 90 bp TACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCGCTGTCAATAGAGATTaGCTCTCATTGCGGCACACC +
Preference number: 2 (lower is better)
Translates to: YGNMEGWFAVGPILAHRFAVNRD*LSLRHT
Trigger: GGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGC...GAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR GCA 90 bp ATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGGAGATTGACTCTCATTaGGGCACACCAGTACAGGCT +
Preference number: 2 (lower is better)
Translates to: MVRKYGGVVCSRTYLSPPEIDSH*GTPVQA
Trigger: AGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC...CGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CCA 90 bp GCCCGCAGCATCTGCCTCAGTGCAGAGAGGATGAGAATATCCTTCATGGGGTCCATGCCTAGCATTTTATaGACATTCATGACCCGGCTT +
Preference number: 2 (lower is better)
Translates to: ARSICLSAERMRISFMGSMPSIL*TFMTRL
Trigger: AAGCCGGGTCATGAATGTCCATAAAATGCTAGGCAT...GGACCCCATGAAGGATATTCTCATCCTCTCTGCACTGAGGCAGATGCTGCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476521.5
3UTR-3UTR TCA 90 bp TCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTAGCTGTCAATAGAGATTaGCTCTCATTGCGGCACACC +
Preference number: 2 (lower is better)
Translates to: SLRHTSTGWAKCQNQGNLAVNRD*LSLRHT
Trigger: GGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGC...TAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR TCA 90 bp AGCAGGCTGTCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGTTCATGACCCGGCTTTaGGAAGTCATAGATCTACTC +
Preference number: 2 (lower is better)
Translates to: SRLSIEIDSHCGTPVQAGFMTRL*EVIDLL
Trigger: GAGTAGATCTATGACTTCTCAAAGCCGGGTCATGAA...CCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476521.5
3UTR-3UTR GCA 90 bp TCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTAGAGATTGACTCTCATTaGGGCACACCAGTACAGGCT +
Preference number: 2 (lower is better)
Translates to: SLRHTSTGWAKCQNQGNLEIDSH*GTPVQA
Trigger: AGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC...TAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR GCA 90 bp TCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCGAGATTGACTCTCATTaGGGCACACCAGTACAGGCT +
Preference number: 2 (lower is better)
Translates to: SIEIDSHCGTPVQAGPNVEIDSH*GTPVQA
Trigger: AGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC...GACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTCACACCAGTACAGGCTaGGCCAAATGTCAGAATCAA +
Preference number: 2 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGHTSTG*AKCQNQ
Trigger: TTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTG...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CCA 90 bp ACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAAGGAAATATGGAGGGGTaGTTTGCAGTAGGACCTATC +
Preference number: 2 (lower is better)
Translates to: TLIAAHQYRLGQMSESRQGNMEG*FAVGPI
Trigger: GATAGGTCCTACTGCAAACCACCCCTCCATATTTCC...TTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CCA 90 bp GGCTTTTGGTTGCAGGATTCCATGACGACTTTGATCAGCCTTGCCATCTTGTGGATCATCCTGAGTAACTaGGACTACAGGCACGTGCCA +
Preference number: 2 (lower is better)
Translates to: GFWLQDSMTTLISLAILWIILSN*DYRHVP
Trigger: TGGCACGTGCCTGTAGTCCCAGTTACTCAGGATGAT...CCACAAGATGGCAAGGCTGATCAAAGTCGTCATGGAATCCTGCAACCAAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR-3UTR GCA 90 bp GTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATCTCAAATGCAGGGCTGAGATTGACTCTCATTaGGGCACACCAGTACAGGCT +
Preference number: 2 (lower is better)
Translates to: VQAGPNVRIKATYLKCRAEIDSH*GTPVQA
Trigger: AGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC...AGCCCTGCATTTGAGATAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476521.5
ENST00000681501.1
3UTR-3UTR GCA 90 bp ATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGATATGGAGGGGTGGTTTaGAGTAGGACCTATCTTAGC +
Preference number: 2 (lower is better)
Translates to: IEIDSHCGTPVQAGPNVRYGGVV*SRTYLS
Trigger: GCTAAGATAGGTCCTACTGCAAACCACCCCTCCATA...TCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CCA 90 bp TCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCCACACCAGTACAGGCTaGGCCAAATGTCAGAATCAA +
Preference number: 2 (lower is better)
Translates to: SIEIDSHCGTPVQAGPNVHTSTG*AKCQNQ
Trigger: TTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTG...GACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CCA 90 bp AGCAGGCTGTCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCGCTTCTCAGGTTTTaGCCTTTGAACTTGAGATAT +
Preference number: 2 (lower is better)
Translates to: SRLSIEIDSHCGTPVQAGPLLRF*PLNLRY
Trigger: ATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGG...CCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR GCA 90 bp ACTCCTTCTCTTCCTTGCAGGATCTCCAACTCCTTCATAAGGGCACTCTGTGTTTATGGAGGGGTGGTTTaGAGTAGGACCTATCTTAGC +
Preference number: 2 (lower is better)
Translates to: TPSLPCRISNSFIRALCVYGGVV*SRTYLS
Trigger: GCTAAGATAGGTCCTACTGCAAACCACCCCTCCATA...AACACAGAGTGCCCTTATGAAGGAGTTGGAGATCCTGCAAGGAAGAGAAGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR-3UTR CCA 90 bp ACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACCGCTTCTCAGGTTTTaGCCTTTGAACTTGAGATAT +
Preference number: 2 (lower is better)
Translates to: TLIAAHQYRLGQMSESRQPLLRF*PLNLRY
Trigger: ATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGG...TTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTCCGCTTCTCAGGTTTTaGCCTTTGAACTTGAGATAT +
Preference number: 2 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGPLLRF*PLNLRY
Trigger: ATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGG...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR CAA 90 bp TGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTaGAACTTGAGATATGACTGTTCCAAGGACAGAAGGCAAAACGAA +
Preference number: 2 (lower is better)
Translates to: CSRTYLSPPLLRFWP*NLRYDCSKDRRQNE
Trigger: TTCGTTTTGCCTTCTGTCCTTGGAACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CCA 90 bp AGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCACCGCTTCTCAGGTTTTaGCCTTTGAACTTGAGATAT +
Preference number: 2 (lower is better)
Translates to: RLTLIAAHQYRLGQMSESPLLRF*PLNLRY
Trigger: ATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGG...TGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR GCA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTTATGGAGGGGTGGTTTaGAGTAGGACCTATCTTAGC +
Preference number: 2 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCYGGVV*SRTYLS
Trigger: GCTAAGATAGGTCCTACTGCAAACCACCCCTCCATA...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR GCA 90 bp ATGGTGAACCTTCAATCACCTTCAGTCTCCCAACCAACAATGGTCATGGCTTGTGAGCACAACTTCACCTaGAGCCTTGCTTTAGGAAAT +
Preference number: 2 (lower is better)
Translates to: MVNLQSPSVSQPTMVMACEHNFT*SLALGN
Trigger: ATTTCCTAAAGCAAGGCTGCAGGTGAAGTTGTGCTC...ACAAGCCATGACCATTGTTGGTTGGGAGACTGAAGGTGATTGAAGGTTCACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR-3UTR CCA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTCACACCAGTACAGGCTaGGCCAAATGTCAGAATCAA +
Preference number: 2 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCHTSTG*AKCQNQ
Trigger: TTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTG...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR CAA 90 bp ATGCAACAACCTAACGTGCCCATTCACACCACAGAGGCTCTAGCATaGACATTTCAACTGTCTCCACAACATCACTCTCACTTTAAGATG +
Preference number: 2 (lower is better)
Translates to: MQQPNVPIHTTEALA*TFQLSPQHHSHFKM
Trigger: CATCTTAAAGTGAGAGTGATGTTGTGGAGACAGTTGAAATGTCAATGCTAGAGCCTCTGTGGTGTGAATGGGCACGTTAGGTTGTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR-3UTR TCA 90 bp AAATGTCAGAATCAAGGCAACTTATCTCAAATGCAGGGCTGTAACGCTCTCTCATCAGTGCAGAGAGGATaGGAATATCCTTCATGGGGT +
Preference number: 2 (lower is better)
Translates to: KCQNQGNLSQMQGCNALSSVQRG*EYPSWG
Trigger: ACCCCATGAAGGATATTCTCATCCTCTCTGCACTGA...TGAGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGCCTTGATTCTGACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476521.5
3UTR-3UTR GCA 90 bp GGCTTTTGGTTGCAGGATTCCATGACGACTTTGATCAGCCTTGCCATCTTGTGGCTGAGCTGTACATCTTaGTTAACCGTAAAGAATGTA +
Preference number: 2 (lower is better)
Translates to: GFWLQDSMTTLISLAILWLSCTS*LTVKNV
Trigger: TACATTCTTTACGGTTAAGCAAGATGTACAGCTCAG...CCACAAGATGGCAAGGCTGATCAAAGTCGTCATGGAATCCTGCAACCAAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR-3UTR CCA 90 bp AAATGTCAGAATCAAGGCAACTTATCTCAAATGCAGGGCTGTAACGCTCTCTCACACACCAGTACAGGCTaGGCCAAATGTCAGAATCAA +
Preference number: 2 (lower is better)
Translates to: KCQNQGNLSQMQGCNALSHTSTG*AKCQNQ
Trigger: TTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTG...TGAGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGCCTTGATTCTGACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476521.5
ENST00000681501.1
3UTR-3UTR CCA 90 bp TGTAAATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCCGCTTCTCAGGTTTTaGCCTTTGAACTTGAGATAT +
Preference number: 2 (lower is better)
Translates to: CKWYGNMEGWFAVGPILAPLLRF*PLNLRY
Trigger: ATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGG...GGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCATTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CCA 90 bp ATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAAAACTGAATTGTAAATaGTACGGAAATATGGAGGGG +
Preference number: 2 (lower is better)
Translates to: IEIDSHCGTPVQAGPNVRKLNCK*YGNMEG
Trigger: CCCCTCCATATTTCCGTACCATTTACAATTCAGTTT...TCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CCA 90 bp TTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATCTAAACTGAATTGTAAATaGTACGGAAATATGGAGGGG +
Preference number: 2 (lower is better)
Translates to: LRHTSTGWAKCQNQGNLSKLNCK*YGNMEG
Trigger: CCCCTCCATATTTCCGTACCATTTACAATTCAGTTT...AGATAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681501.1
3UTR-3UTR TCA 90 bp TACTTATGTCTCTCTGGGCCTGCATACCTCATAGAACTCAAACTGCTCTATTTTGAGGTAGATGGTGGGTaGGTTTGCACAAAGCTACAA +
Preference number: 2 (lower is better)
Translates to: YLCLSGPAYLIELKLLYFEVDGG*VCTKLQ
Trigger: TTGTAGCTTTGTGCAAACTCACCCACCATCTACCTC...AAAATAGAGCAGTTTGAGTTCTATGAGGTATGCAGGCCCAGAGAGACATAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR-3UTR GCA 90 bp AAGATGTCACAGAAACTGAATTGTAAATGGTACGGAAATATGGAGGGGTGGTTTGAGATTGACTCTCATTaGGGCACACCAGTACAGGCT +
Preference number: 2 (lower is better)
Translates to: KMSQKLNCKWYGNMEGWFEIDSH*GTPVQA
Trigger: AGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC...AAACCACCCCTCCATATTTCCGTACCATTTACAATTCAGTTTCTGTGACATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CCA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTCCGCTTCTCAGGTTTTaGCCTTTGAACTTGAGATAT +
Preference number: 2 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCPLLRF*PLNLRY
Trigger: ATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGG...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CCA 90 bp TACACATTACCCAGCACAGTAACCCCTCTTGGTATTGTTGACCTAAAAGGAAGATTTTTGCAGTGGAGATaGGGTTTCATCATGTTGCCC +
Preference number: 2 (lower is better)
Translates to: YTLPSTVTPLGIVDLKGRFLQWR*GFIMLP
Trigger: GGGCAACATGATGAAACCCCATCTCCACTGCAAAAA...TCTTCCTTTTAGGTCAACAATACCAAGAGGGGTTACTGTGCTGGGTAATGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR-3UTR CCA 90 bp AAGATGTCACAGAAACTGAATTGTAAATGGTACGGAAATATGGAGGGGTGGTTTCACACCAGTACAGGCTaGGCCAAATGTCAGAATCAA +
Preference number: 2 (lower is better)
Translates to: KMSQKLNCKWYGNMEGWFHTSTG*AKCQNQ
Trigger: TTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTG...AAACCACCCCTCCATATTTCCGTACCATTTACAATTCAGTTTCTGTGACATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR GCA 90 bp ACGCTGTTTCTCAAAGAACTCACAATCTGTTTAAGAAGCAGATGTCTATACAATTATGGAGGGGTGGTTTaGAGTAGGACCTATCTTAGC +
Preference number: 2 (lower is better)
Translates to: TLFLKELTICLRSRCLYNYGGVV*SRTYLS
Trigger: GCTAAGATAGGTCCTACTGCAAACCACCCCTCCATA...ATTGTATAGACATCTGCTTCTTAAACAGATTGTGAGTTCTTTGAGAAACAGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CAA 90 bp GCAATTTTGCCTACACTGCACTTCCTGTCCTGGAGCCTGAAACAGTCTGAGTCTTCCCATGGCTTTTGGTaGCAGGATTCCATGACGACT +
Preference number: 3 (lower is better)
Translates to: AILPTLHFLSWSLKQSESSHGFW*QDSMTT
Trigger: AGTCGTCATGGAATCCTGCAACCAAAAGCCATGGGA...AGACTCAGACTGTTTCAGGCTCCAGGACAGGAAGTGCAGTGTAGGCAAAATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR TCA 72 bp CAAAAGCAAAATCTGAAGCAGGCTGTCAATAGAGATTaGCTCTCATTGCGGCACACCAGTACAGGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: QKQNLKQAVNRD*LSLRHTSTGWA
Trigger: GGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGCCTGCTTCAGATTTTGCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR CCA 72 bp ACAATTGCCCCCAGCTATGGTTGTGGAGGGGCAGTGTaGCACACAGGAAGCAAGACTAAAGGAACATACTTA +
Preference number: 3 (lower is better)
Translates to: TIAPSYGCGGAV*HTGSKTKGTYL
Trigger: TAAGTATGTTCCTTTAGTCTTGCTTCCTGTGTGCCACACTGCCCCTCCACAACCATAGCTGGGGGCAATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR-3UTR CAA 90 bp TACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCACCGCTTCTCAGGTTTaGGCCTTTGAACTTGAGATA +
Preference number: 3 (lower is better)
Translates to: YGNMEGWFAVGPILAHRFTASQV*AFELEI
Trigger: TATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGT...GAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CAA 90 bp GGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAACCGCTTCTCAGGTTTaGGCCTTTGAACTTGAGATA +
Preference number: 3 (lower is better)
Translates to: GNMEGWFAVGPILAHRFSTASQV*AFELEI
Trigger: TATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGT...TGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CAA 90 bp GCAATTTTGCCTACACTGCACTTCCTGTCCTGGAGCCTGAAACAGTCTGAGTCTCTCCTGAACATTCACTaGAGCACAACTTCACCTGCA +
Preference number: 3 (lower is better)
Translates to: AILPTLHFLSWSLKQSESLLNIH*STTSPA
Trigger: TGCAGGTGAAGTTGTGCTCAAGTGAATGTTCAGGAG...AGACTCAGACTGTTTCAGGCTCCAGGACAGGAAGTGCAGTGTAGGCAAAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR-3UTR CAA 90 bp GCAATTTTGCCTACACTGCACTTCCTGTCCTGGAGCCTGAAACAGTCTGAGTCTGATGTTTCCCCCTTTTaGAGGCCTCCTCACCAATAT +
Preference number: 3 (lower is better)
Translates to: AILPTLHFLSWSLKQSESDVSPF*RPPHQY
Trigger: ATATTGGTGAGGAGGCCTCAAAAAGGGGGAAACATC...AGACTCAGACTGTTTCAGGCTCCAGGACAGGAAGTGCAGTGTAGGCAAAATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR-3UTR CAA 90 bp GGCTTTTGGTTGCAGGATTCCATGACGACTTTGATCAGCCTTGCCATCTTGTGGACCGCTTCTCAGGTTTaGGCCTTTGAACTTGAGATA +
Preference number: 3 (lower is better)
Translates to: GFWLQDSMTTLISLAILWTASQV*AFELEI
Trigger: TATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGT...CCACAAGATGGCAAGGCTGATCAAAGTCGTCATGGAATCCTGCAACCAAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR-3UTR CAA 90 bp GGCTTTTGGTTGCAGGATTCCATGACGACTTTGATCAGCCTTGCCATCTTGTGGACAGAGGCTCTAGCATaGACATTTCAACTGTCTCCA +
Preference number: 3 (lower is better)
Translates to: GFWLQDSMTTLISLAILWTEALA*TFQLSP
Trigger: TGGAGACAGTTGAAATGTCAATGCTAGAGCCTCTGT...CCACAAGATGGCAAGGCTGATCAAAGTCGTCATGGAATCCTGCAACCAAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR-3UTR CAA 90 bp GGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCATTTTGGCCTTTGAACTaGAGATATGACTGTTCCAAG +
Preference number: 3 (lower is better)
Translates to: GNMEGWFAVGPILAHRFSFWPLN*RYDCSK
Trigger: CTTGGAACAGTCATATCTCAAGTTCAAAGGCCAAAA...TGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CAA 90 bp ATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGTTTTGGCCTTTGAACTaGAGATATGACTGTTCCAAG +
Preference number: 3 (lower is better)
Translates to: MVRKYGGVVCSRTYLSPPFWPLN*RYDCSK
Trigger: CTTGGAACAGTCATATCTCAAGTTCAAAGGCCAAAA...CGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR TCA 72 bp AAGGAAGTGGGATTGTGGGAGGGTACAGCTGAACATTaGCTGTACTTCTATATCCATGATCTCACTGGCCCA +
Preference number: 3 (lower is better)
Translates to: KEVGLWEGTAEH*LYFYIHDLTGP
Trigger: TGGGCCAGTGAGATCATGGATATAGAAGTACAGTCAATGTTCAGCTGTACCCTCCCACAATCCCACTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR CCA 72 bp AGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTaGCCTTTGAACTTGAGATATGACTGTTCCAAGGAC +
Preference number: 3 (lower is better)
Translates to: SRTYLSPPLLRF*PLNLRYDCSKD
Trigger: GTCCTTGGAACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CAA 90 bp AGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCATTTTGGCCTTTGAACTaGAGATATGACTGTTCCAAG +
Preference number: 3 (lower is better)
Translates to: RLTLIAAHQYRLGQMSESFWPLN*RYDCSK
Trigger: CTTGGAACAGTCATATCTCAAGTTCAAAGGCCAAAA...TGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CAA 90 bp ACTCCTTCTCTTCCTTGCAGGATCTCCAACTCCTTCATAAGGGCACTCTGTGTTATCATGCCCTACTTTTaGGACCTGTTGCTTCTACAT +
Preference number: 3 (lower is better)
Translates to: TPSLPCRISNSFIRALCVIMPYF*DLLLLH
Trigger: ATGTAGAAGCAACAGGTCCAAAAAGTAGGGCATGAT...AACACAGAGTGCCCTTATGAAGGAGTTGGAGATCCTGCAAGGAAGAGAAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR-3UTR CAA 90 bp AGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCACCAACCATCAAAATATaGGAAATAGGAATGCCTAGC +
Preference number: 3 (lower is better)
Translates to: RLTLIAAHQYRLGQMSESPTIKI*EIGMPS
Trigger: GCTAGGCATTCCTATTTCCAATATTTTGATGGTTGG...TGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476521.5
3UTR GCA 72 bp GGGCCAAATGTCAGAATCAAGGCAACTTATCTCAAATaGAGGGCTGTAACGCTCTCTCAATTGCACCAGTTT +
Preference number: 3 (lower is better)
Translates to: GPNVRIKATYLK*RAVTLSQLHQF
Trigger: AAACTGGTGCAATTGAGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGCCTTGATTCTGACATTTGGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476521.5
ENST00000681501.1
3UTR CCA 72 bp AAACTGAATTGTAAATGGTACGGAAATATGGAGGGGTaGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTC +
Preference number: 3 (lower is better)
Translates to: KLNCKWYGNMEG*FAVGPILAHRF
Trigger: GAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCATTTACAATTCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR-3UTR CAA 90 bp TCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATACTTCTTTGTGAACTaGCTTCACTTTTGCCAACAT +
Preference number: 3 (lower is better)
Translates to: SLRHTSTGWAKCQNQGNLYFFVN*LHFCQH
Trigger: ATGTTGGCAAAAGTGAAGCAAGTTCACAAAGAAGTA...TAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476521.5
3UTR GCA 72 bp AACAAATCAGCAGCTCCAGACCTTCAGCACCTTACCTaGCTTTCTCTTAAAAATCCTAAACTTAGACTCAGC +
Preference number: 3 (lower is better)
Translates to: NKSAAPDLQHLT*LSLKNPKLRLS
Trigger: GCTGAGTCTAAGTTTAGGATTTTTAAGAGAAAGGCAGGTAAGGTGCTGAAGGTCTGGAGCTGCTGATTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR-3UTR CAA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTTTTTGGCCTTTGAACTaGAGATATGACTGTTCCAAG +
Preference number: 3 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCFWPLN*RYDCSK
Trigger: CTTGGAACAGTCATATCTCAAGTTCAAAGGCCAAAA...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR TCA 72 bp CAGCCTTGCCATCTTGTGGGTACCTTAGCATTAGATTaGGTTATGTTGCTAGGAGATGATTATTCATCAGCT +
Preference number: 3 (lower is better)
Translates to: QPCHLVGTLALD*VMLLGDDYSSA
Trigger: AGCTGATGAATAATCATCTCCTAGCAACATAACTCAATCTAATGCTAAGGTACCCACAAGATGGCAAGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR CCA 72 bp AACATCAAGTTTCTATCTAAAAAGTTTTCCAGATCTTaGAATCCCATGGGTCTGCTGACACCAGTCAGTCTG +
Preference number: 3 (lower is better)
Translates to: NIKFLSKKFSRS*NPMGLLTPVSL
Trigger: CAGACTGACTGGTGTCAGCAGACCCATGGGATTCCAAGATCTGGAAAACTTTTTAGATAGAAACTTGATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR CCA 72 bp ATTTGGGCCAAGCATGAGGGTTACAACCCAACTGTATaGAGACAAGTTGTCCTGAACAATACACATTCTTAT +
Preference number: 3 (lower is better)
Translates to: IWAKHEGYNPTV*RQVVLNNTHSY
Trigger: ATAAGAATGTGTATTGTTCAGGACAACTTGTCTCCATACAGTTGGGTTGTAACCCTCATGCTTGGCCCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR-3UTR CAA 90 bp TACACATTACCCAGCACAGTAACCCCTCTTGGTATTGTTGACCTAAAAGGAAGACTGTTGCTTCTACATTaGTATGGTAACTGTGAAACC +
Preference number: 3 (lower is better)
Translates to: YTLPSTVTPLGIVDLKGRLLLLH*YGNCET
Trigger: GGTTTCACAGTTACCATACAAATGTAGAAGCAACAG...TCTTCCTTTTAGGTCAACAATACCAAGAGGGGTTACTGTGCTGGGTAATGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR TCA 72 bp TTCAACTGTCTCCACAACATCACTCTCACTTTAAGATaGTATTCTCCCAGCCAACACACATATAGGTCATCT +
Preference number: 3 (lower is better)
Translates to: FNCLHNITLTLR*YSPSQHTYRSS
Trigger: AGATGACCTATATGTGTGTTGGCTGGGAGAATATCATCTTAAAGTGAGAGTGATGTTGTGGAGACAGTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR CCA 72 bp ATTTTTGCAATTTTGCCTACACTGCACTTCCTGTCCTaGAGCCTGAAACAGTCTGAGTCTATTTGTTTGAAT +
Preference number: 3 (lower is better)
Translates to: IFAILPTLHFLS*SLKQSESICLN
Trigger: ATTCAAACAAATAGACTCAGACTGTTTCAGGCTCCAGGACAGGAAGTGCAGTGTAGGCAAAATTGCAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR-3UTR CAA 90 bp ACGCTGTTTCTCAAAGAACTCACAATCTGTTTAAGAAGCAGATGTCTATACAATACCGCTTCTCAGGTTTaGGCCTTTGAACTTGAGATA +
Preference number: 3 (lower is better)
Translates to: TLFLKELTICLRSRCLYNTASQV*AFELEI
Trigger: TATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGT...ATTGTATAGACATCTGCTTCTTAAACAGATTGTGAGTTCTTTGAGAAACAGCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR CCA 72 bp CCAACATCAGAGAAAGATTTTGCAAGGGTGTACAATTaGTATGCAAGTTTTTATCCTCCTTACATTGATGGC +
Preference number: 3 (lower is better)
Translates to: PTSEKDFARVYN*YASFYPPYIDG
Trigger: GCCATCAATGTAAGGAGGATAAAAACTTGCATACCAATTGTACACCCTTGCAAAATCTTTCTCTGATGTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR TCA 72 bp AGGGTTACAACCCAACTGTATGGAGACAAGTTGTCCTaGACAATACACATTCTTATTAGCAACAGTTATAAG +
Preference number: 3 (lower is better)
Translates to: RVTTQLYGDKLS*TIHILISNSYK
Trigger: CTTATAACTGTTGCTAATAAGAATGTGTATTGTTCAGGACAACTTGTCTCCATACAGTTGGGTTGTAACCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR GCA 72 bp CAATACCTGCTGTTTTGGTATATTGGTGTGTTACTGTaGAATAAGAACAACTCTGGTGAGCCTAAAATAACT +
Preference number: 3 (lower is better)
Translates to: QYLLFWYIGVLL*NKNNSGEPKIT
Trigger: AGTTATTTTAGGCTCACCAGAGTTGTTCTTATTGCACAGTAACACACCAATATACCAAAACAGCAGGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR-3UTR CAA 90 bp ACGCTGTTTCTCAAAGAACTCACAATCTGTTTAAGAAGCAGATGTCTATACAATTTTTGGCCTTTGAACTaGAGATATGACTGTTCCAAG +
Preference number: 3 (lower is better)
Translates to: TLFLKELTICLRSRCLYNFWPLN*RYDCSK
Trigger: CTTGGAACAGTCATATCTCAAGTTCAAAGGCCAAAA...ATTGTATAGACATCTGCTTCTTAAACAGATTGTGAGTTCTTTGAGAAACAGCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
3UTR TCA 72 bp GAGGCAGTTCCTAAGTTATTTACCACGAATTTACATTaGAACAGCATAAGCTATCAATTGGCTATAAATTGC +
Preference number: 3 (lower is better)
Translates to: EAVPKLFTTNLH*NSISYQLAINC
Trigger: GCAATTTATAGCCAATTGATAGCTTATGCTGTTTCAATGTAAATTCGTGGTAAATAACTTAGGAACTGCCTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp AGCAGGCTGTCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGGCTCGGTTATGCTGGTaGTATCAGACCCCACTACGG +
Preference number: 4 (lower is better)
Translates to: SRLSIEIDSHCGTPVQAGARLCW*YQTPLR
Trigger: CCGTAGTGGGGTCTGATATCACCAGCATAACCGAGC...CCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
CDS-3UTR TCA 90 bp ACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAAGCTCGGTTATGCTGGTaGTATCAGACCCCACTACGG +
Preference number: 4 (lower is better)
Translates to: TLIAAHQYRLGQMSESRQARLCW*YQTPLR
Trigger: CCGTAGTGGGGTCTGATATCACCAGCATAACCGAGC...TTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
CDS-3UTR TCA 90 bp GAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCGCTCGGTTATGCTGGTaGTATCAGACCCCACTACGG +
Preference number: 4 (lower is better)
Translates to: EIDSHCGTPVQAGPNVRIARLCW*YQTPLR
Trigger: CCGTAGTGGGGTCTGATATCACCAGCATAACCGAGC...GATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
CDS-3UTR TCA 90 bp TTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGGCTCGGTTATGCTGGTaGTATCAGACCCCACTACGG +
Preference number: 4 (lower is better)
Translates to: LTLIAAHQYRLGQMSESRARLCW*YQTPLR
Trigger: CCGTAGTGGGGTCTGATATCACCAGCATAACCGAGC...CCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
CDS-3UTR GCA 90 bp AGCAGGCTGTCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGGGGGAATGTCATCCATaGACAGTCCTGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SRLSIEIDSHCGTPVQAGGECHP*TVLLLL
Trigger: CAGAAGGAGCAGGACTGTGCATGGATGACATTCCCC...CCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGCCTGCT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp ATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGGGGGAATGTCATCCATaGACAGTCCTGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: MVRKYGGVVCSRTYLSPPGECHP*TVLLLL
Trigger: CAGAAGGAGCAGGACTGTGCATGGATGACATTCCCC...CGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp TTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGGGGGAATGTCATCCATaGACAGTCCTGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LTLIAAHQYRLGQMSESRGECHP*TVLLLL
Trigger: CAGAAGGAGCAGGACTGTGCATGGATGACATTCCCC...CCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTGGGGAATGTCATCCATaGACAGTCCTGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGGECHP*TVLLLL
Trigger: CAGAAGGAGCAGGACTGTGCATGGATGACATTCCCC...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp CTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACGAGATTGACTCTCATTaGGGCACACCAGTACAGGCT +
Preference number: 4 (lower is better)
Translates to: LSLRHTSTGWAKCQNQGNEIDSH*GTPVQA
Trigger: AGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC...GTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp TGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTGCAACAACCTAACGTaGCCATTCACACCACAGAGG +
Preference number: 4 (lower is better)
Translates to: WYGNMEGWFAVGPILAHRCNNLT*PFTPQR
Trigger: CCTCTGTGGTGTGAATGGGCACGTTAGGTTGTTGCA...GCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp AGCAGGCTGTCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCTCACTCTTTCTCCCTaGCTAGAGTACAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: SRLSIEIDSHCGTPVQAGLTLSP*LEYSGT
Trigger: TGTGCCACTGTACTCTAGCCAGGGAGAAAGAGTGAG...CCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370751.10
ENST00000679848.1
CDS-3UTR CCA 90 bp CTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACGTGGTTACCAGAGGTTaGGAAAGTCAGAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LSLRHTSTGWAKCQNQGNVVTRG*ESQRKE
Trigger: CTCCTTCCTCTGACTTTCCCAACCTCTGGTAACCAC...GTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679848.1
CDS-3UTR TCA 90 bp TGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTCAGTGCAGAGAGGATaGGAATATCCTTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: WYGNMEGWFAVGPILAHRSVQRG*EYPSWG
Trigger: ACCCCATGAAGGATATTCTCATCCTCTCTGCACTGA...GCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp GAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCGCTGTCAATAGAGATTaGCTCTCATTGCGGCACACC +
Preference number: 4 (lower is better)
Translates to: EIDSHCGTPVQAGPNVRIAVNRD*LSLRHT
Trigger: GGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGC...GATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp GGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGCTGTCAATAGAGATTaGCTCTCATTGCGGCACACC +
Preference number: 4 (lower is better)
Translates to: GNMEGWFAVGPILAHRFSAVNRD*LSLRHT
Trigger: GGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGC...TGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp ATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGGCTGTCAATAGAGATTaGCTCTCATTGCGGCACACC +
Preference number: 4 (lower is better)
Translates to: MVRKYGGVVCSRTYLSPPAVNRD*LSLRHT
Trigger: GGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGC...CGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp ACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAAGCTGTCAATAGAGATTaGCTCTCATTGCGGCACACC +
Preference number: 4 (lower is better)
Translates to: TLIAAHQYRLGQMSESRQAVNRD*LSLRHT
Trigger: GGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGC...TTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp TTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGGCTGTCAATAGAGATTaGCTCTCATTGCGGCACACC +
Preference number: 4 (lower is better)
Translates to: LTLIAAHQYRLGQMSESRAVNRD*LSLRHT
Trigger: GGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGC...CCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp TCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCGGGGAATGTCATCCATaGACAGTCCTGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SIEIDSHCGTPVQAGPNVGECHP*TVLLLL
Trigger: CAGAAGGAGCAGGACTGTGCATGGATGACATTCCCC...GACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp TTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGGAGATTGACTCTCATTaGGGCACACCAGTACAGGCT +
Preference number: 4 (lower is better)
Translates to: LTLIAAHQYRLGQMSESREIDSH*GTPVQA
Trigger: AGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC...CCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp TACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCGAGATTGACTCTCATTaGGGCACACCAGTACAGGCT +
Preference number: 4 (lower is better)
Translates to: YGNMEGWFAVGPILAHRFEIDSH*GTPVQA
Trigger: AGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC...GAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp CTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTATGGAGGGGTGGTTTaGAGTAGGACCTATCTTAGC +
Preference number: 4 (lower is better)
Translates to: LSLRHTSTGWAKCQNQGNYGGVV*SRTYLS
Trigger: GCTAAGATAGGTCCTACTGCAAACCACCCCTCCATA...GTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp TCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTAATCGTGGAGCTGGATaGTGTTCAAAGCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SHCGTPVQAGPNVRIKATNRGAG*CSKPSL
Trigger: CAGGCTTGGCTTTGAACAGCATCCAGCTCCACGATT...AGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679998.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp AGCAGGCTGTCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCTTTCCAGACCCAACTaGACCCACCAAAAGAATACG +
Preference number: 4 (lower is better)
Translates to: SRLSIEIDSHCGTPVQAGLSRPN*THQKNT
Trigger: CGTATTCTTTTGGTGGGTCCAGTTGGGTCTGGAAAG...CCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
CDS-3UTR CCA 90 bp TGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCCACACCAGTACAGGCTaGGCCAAATGTCAGAATCAA +
Preference number: 4 (lower is better)
Translates to: WYGNMEGWFAVGPILAHRHTSTG*AKCQNQ
Trigger: TTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTG...GCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp AGCAGGCTGTCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCACACCAGTACAGGCTaGGCCAAATGTCAGAATCAA +
Preference number: 4 (lower is better)
Translates to: SRLSIEIDSHCGTPVQAGHTSTG*AKCQNQ
Trigger: TTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTG...CCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp AGCAGGCTGTCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGGGAAATATGGAGGGGTaGTTTGCAGTAGGACCTATC +
Preference number: 4 (lower is better)
Translates to: SRLSIEIDSHCGTPVQAGGNMEG*FAVGPI
Trigger: GATAGGTCCTACTGCAAACCACCCCTCCATATTTCC...CCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp TGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCATTAACTGTTCTGTCTaGTTTATCGAGCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: WYGNMEGWFAVGPILAHRINCSV*FIEQPR
Trigger: CCGTGGCTGCTCGATAAATCAGACAGAACAGTTAAT...GCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679998.1
ENST00000680110.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp TTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGAGGGCCTATAGTCTCTaGTGTCTGCTAGAAGCCTAT +
Preference number: 4 (lower is better)
Translates to: LTLIAAHQYRLGQMSESRRAYSL*CLLEAY
Trigger: ATAGGCTTCTAGCAGACATCAGAGACTATAGGCCCT...CCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
CDS-3UTR TCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTAGGGCCTATAGTCTCTaGTGTCTGCTAGAAGCCTAT +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGRAYSL*CLLEAY
Trigger: ATAGGCTTCTAGCAGACATCAGAGACTATAGGCCCT...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
CDS-3UTR TCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTCAGTGCAGAGAGGATaGGAATATCCTTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGSVQRG*EYPSWG
Trigger: ACCCCATGAAGGATATTCTCATCCTCTCTGCACTGA...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTGAGGTAGATGGTGGGTaGGTTTGCACAAAGCTACAA +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGEVDGG*VCTKLQ
Trigger: TTGTAGCTTTGTGCAAACTCACCCACCATCTACCTC...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp ACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAATCCTGTCCTGGAGCCTaGAACAGTCTGAGTCTATTT +
Preference number: 4 (lower is better)
Translates to: TLIAAHQYRLGQMSESRQSCPGA*NSLSLF
Trigger: AAATAGACTCAGACTGTTTCAGGCTCCAGGACAGGA...TTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR GCA 90 bp TCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTCAGCATCTGCCTCAGTaGAGAGAGGATGAGAATATC +
Preference number: 4 (lower is better)
Translates to: SHCGTPVQAGPNVRIKATQHLPQ*REDENI
Trigger: GATATTCTCATCCTCTCTGCACTGAGGCAGATGCTG...AGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp TTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAGCATCTGCCTCAGTaGAGAGAGGATGAGAATATC +
Preference number: 4 (lower is better)
Translates to: LTLIAAHQYRLGQMSESRQHLPQ*REDENI
Trigger: GATATTCTCATCCTCTCTGCACTGAGGCAGATGCTG...CCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp CATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATGAGATTGACTCTCATTaGGGCACACCAGTACAGGCT +
Preference number: 4 (lower is better)
Translates to: HCGTPVQAGPNVRIKATYEIDSH*GTPVQA
Trigger: AGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC...ATAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp GAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCTATGGAGGGGTGGTTTaGAGTAGGACCTATCTTAGC +
Preference number: 4 (lower is better)
Translates to: EIDSHCGTPVQAGPNVRIYGGVV*SRTYLS
Trigger: GCTAAGATAGGTCCTACTGCAAACCACCCCTCCATA...GATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTATGGAGGGGTGGTTTaGAGTAGGACCTATCTTAGC +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGYGGVV*SRTYLS
Trigger: GCTAAGATAGGTCCTACTGCAAACCACCCCTCCATA...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp ACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAATATGGAGGGGTGGTTTaGAGTAGGACCTATCTTAGC +
Preference number: 4 (lower is better)
Translates to: TLIAAHQYRLGQMSESRQYGGVV*SRTYLS
Trigger: GCTAAGATAGGTCCTACTGCAAACCACCCCTCCATA...TTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp TCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTAAATCGTGGAGCTGGATaGTGTTCAAAGCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SLRHTSTGWAKCQNQGNLNRGAG*CSKPSL
Trigger: CAGGCTTGGCTTTGAACAGCATCCAGCTCCACGATT...TAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679998.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp ACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACGAGCAGCCACGGTTTaGAGACAGAAAGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: TLIAAHQYRLGQMSESRQRAATV*RQKVLK
Trigger: CTTAAGAACTTTCTGTCTCCAAACCGTGGCTGCTCG...TTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679998.1
ENST00000680110.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp GAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCCACACCAGTACAGGCTaGGCCAAATGTCAGAATCAA +
Preference number: 4 (lower is better)
Translates to: EIDSHCGTPVQAGPNVRIHTSTG*AKCQNQ
Trigger: TTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTG...GATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp ACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACACACCAGTACAGGCTaGGCCAAATGTCAGAATCAA +
Preference number: 4 (lower is better)
Translates to: TLIAAHQYRLGQMSESRQHTSTG*AKCQNQ
Trigger: TTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTG...TTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTGGAAATATGGAGGGGTaGTTTGCAGTAGGACCTATC +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGGNMEG*FAVGPI
Trigger: GATAGGTCCTACTGCAAACCACCCCTCCATATTTCC...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp TCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTGGAAATATGGAGGGGTaGTTTGCAGTAGGACCTATC +
Preference number: 4 (lower is better)
Translates to: SHCGTPVQAGPNVRIKATGNMEG*FAVGPI
Trigger: GATAGGTCCTACTGCAAACCACCCCTCCATATTTCC...AGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp ATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCATCCTGAGTAACTaGGACTACAGGCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: IEIDSHCGTPVQAGPNVRIILSN*DYRHVP
Trigger: TGGCACGTGCCTGTAGTCCCAGTTACTCAGGATGAT...TCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370751.10
ENST00000679848.1
CDS-3UTR CCA 90 bp TGTAAATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCTGTGGAGGGGCAGTGTaGCACACAGGAAGCAAGACT +
Preference number: 4 (lower is better)
Translates to: CKWYGNMEGWFAVGPILACGGAV*HTGSKT
Trigger: AGTCTTGCTTCCTGTGTGCCACACTGCCCCTCCACA...GGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCATTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp CTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACAATTCCCATGGCTTTTaGTTGCAGGATTCCATGACG +
Preference number: 4 (lower is better)
Translates to: LSLRHTSTGWAKCQNQGNNSHGF*LQDSMT
Trigger: CGTCATGGAATCCTGCAACCAAAAGCCATGGGAATT...GTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp ACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAAAAGGAAGTGGGATTGTaGGAGGGTACAGCTGAACAT +
Preference number: 4 (lower is better)
Translates to: TLIAAHQYRLGQMSESRQKEVGL*EGTAEH
Trigger: ATGTTCAGCTGTACCCTCCCACAATCCCACTTCCTT...TTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp TGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCATAGAATCGTGGAGCTaGATGCTGTTCAAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: WYGNMEGWFAVGPILAHRIESWS*MLFKAK
Trigger: CTTGGCTTTGAACAGCATCCAGCTCCACGATTCTAT...GCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679998.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTGTGGTTACCAGAGGTTaGGAAAGTCTGTTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGVVTRG*ESLFLG
Trigger: CCCTAGAAACAGACTTTCCCAACCTCTGGTAACCAC...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459784.6
CDS-3UTR TCA 90 bp GAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCATTAACTGTTCTGTCTaGTTTATCGAGCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: EIDSHCGTPVQAGPNVRIINCSV*FIEQPR
Trigger: CCGTGGCTGCTCGATAAATCAGACAGAACAGTTAAT...GATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679998.1
ENST00000680110.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTATTAACTGTTCTGTCTaGTTTATCGAGCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGINCSV*FIEQPR
Trigger: CCGTGGCTGCTCGATAAATCAGACAGAACAGTTAAT...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679998.1
ENST00000680110.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp TTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGAGCAGCTTGCGCAGATaGTTTTCATCATTCCATGTC +
Preference number: 4 (lower is better)
Translates to: LTLIAAHQYRLGQMSESRSSLRR*FSSFHV
Trigger: GACATGGAATGATGAAAATCATCTGCGCAAGCTGCT...CCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp GGCTTTTGGTTGCAGGATTCCATGACGACTTTGATCAGCCTTGCCATCTTGTGGGTTATAGTACATCCCTaGCGGCTGCATCTTTCAACC +
Preference number: 4 (lower is better)
Translates to: GFWLQDSMTTLISLAILWVIVHP*RLHLST
Trigger: GGTTGAAAGATGCAGCCGTCAGGGATGTACTATAAC...CCACAAGATGGCAAGGCTGATCAAAGTCGTCATGGAATCCTGCAACCAAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp TGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGGGCCTATAGTCTCTaGTGTCTGCTAGAAGCCTAT +
Preference number: 4 (lower is better)
Translates to: CSRTYLSPPLLRFWPLNLRAYSL*CLLEAY
Trigger: ATAGGCTTCTAGCAGACATCAGAGACTATAGGCCCT...CAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
CDS-3UTR TCA 90 bp CTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACCCAGTCACATGGCCATaGAAAATAGACTTGACTGAA +
Preference number: 4 (lower is better)
Translates to: LSLRHTSTGWAKCQNQGNPVTWP*KIDLTE
Trigger: TTCAGTCAAGTCTATTTTTCATGGCCATGTGACTGG...GTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
CDS-3UTR TCA 90 bp TACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTTCATGACCCGGCTTTaGGAAGTCATAGATCTACTC +
Preference number: 4 (lower is better)
Translates to: YGNMEGWFAVGPILAHRFFMTRL*EVIDLL
Trigger: GAGTAGATCTATGACTTCTCAAAGCCGGGTCATGAA...GAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR TCA 90 bp TTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGTTCATGACCCGGCTTTaGGAAGTCATAGATCTACTC +
Preference number: 4 (lower is better)
Translates to: LTLIAAHQYRLGQMSESRFMTRL*EVIDLL
Trigger: GAGTAGATCTATGACTTCTCAAAGCCGGGTCATGAA...CCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR TCA 90 bp TGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGTCAGTGCAGAGAGGATaGGAATATCCTTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: CSRTYLSPPLLRFWPLNLSVQRG*EYPSWG
Trigger: ACCCCATGAAGGATATTCTCATCCTCTCTGCACTGA...CAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp ATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGATCAGTGCAGAGAGGATaGGAATATCCTTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: IEIDSHCGTPVQAGPNVRSVQRG*EYPSWG
Trigger: ACCCCATGAAGGATATTCTCATCCTCTCTGCACTGA...TCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp TCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATCAGTGCAGAGAGGATaGGAATATCCTTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: SLRHTSTGWAKCQNQGNLSVQRG*EYPSWG
Trigger: ACCCCATGAAGGATATTCTCATCCTCTCTGCACTGA...TAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTATGTTTCCCCCTTTTTaGGGCCTCCTCACCAATATT +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGMFPPF*GLLTNI
Trigger: AATATTGGTGAGGAGGCCTCAAAAAGGGGGAAACAT...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp CATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATGTGGGAGGGTACAGCTaGACATTGACTGTACTTCTA +
Preference number: 4 (lower is better)
Translates to: HCGTPVQAGPNVRIKATYVGGYS*TLTVLL
Trigger: TAGAAGTACAGTCAATGTTCAGCTGTACCCTCCCAC...ATAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR GCA 90 bp TCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTACAGCATCTGCCTCAGTaGAGAGAGGATGAGAATATC +
Preference number: 4 (lower is better)
Translates to: SLRHTSTGWAKCQNQGNLQHLPQ*REDENI
Trigger: GATATTCTCATCCTCTCTGCACTGAGGCAGATGCTG...TAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp AGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCACAGCATCTGCCTCAGTaGAGAGAGGATGAGAATATC +
Preference number: 4 (lower is better)
Translates to: RLTLIAAHQYRLGQMSESQHLPQ*REDENI
Trigger: GATATTCTCATCCTCTCTGCACTGAGGCAGATGCTG...TGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp TTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGGCAACTTATCTCAAATaGAGGGCTGTAACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LTLIAAHQYRLGQMSESRATYLK*RAVTLS
Trigger: AGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGC...CCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTGCAACTTATCTCAAATaGAGGGCTGTAACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGATYLK*RAVTLS
Trigger: AGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGC...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp ACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAAAATGGCAAGTATGCTTaGTCATTACCAGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: TLIAAHQYRLGQMSESRQNGKYA*SLPGTV
Trigger: CACAGTGCCTGGTAATGAGCAAGCATACTTGCCATT...TTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp TCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTAATGGCAAGTATGCTTaGTCATTACCAGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: SHCGTPVQAGPNVRIKATNGKYA*SLPGTV
Trigger: CACAGTGCCTGGTAATGAGCAAGCATACTTGCCATT...AGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTAATGGCAAGTATGCTTaGTCATTACCAGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGNGKYA*SLPGTV
Trigger: CACAGTGCCTGGTAATGAGCAAGCATACTTGCCATT...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp GGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAAATGGCAAGTATGCTTaGTCATTACCAGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: GNMEGWFAVGPILAHRFSNGKYA*SLPGTV
Trigger: CACAGTGCCTGGTAATGAGCAAGCATACTTGCCATT...TGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp GGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGAGCACAACTTCACCTaGAGCCTTGCTTTAGGAAAT +
Preference number: 4 (lower is better)
Translates to: GNMEGWFAVGPILAHRFSEHNFT*SLALGN
Trigger: ATTTCCTAAAGCAAGGCTGCAGGTGAAGTTGTGCTC...TGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR GCA 90 bp GGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGACTTTGATCAGCCTTaGCATCTTGTGGGTACCTTA +
Preference number: 4 (lower is better)
Translates to: GNMEGWFAVGPILAHRFSDFDQP*HLVGTL
Trigger: TAAGGTACCCACAAGATGGCAAGGCTGATCAAAGTC...TGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp TGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGCGAGCAGCCACGGTTTaGAGACAGAAAGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: CSRTYLSPPLLRFWPLNLRAATV*RQKVLK
Trigger: CTTAAGAACTTTCTGTCTCCAAACCGTGGCTGCTCG...CAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679998.1
ENST00000680110.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp TCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCCGAGCAGCCACGGTTTaGAGACAGAAAGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: SIEIDSHCGTPVQAGPNVRAATV*RQKVLK
Trigger: CTTAAGAACTTTCTGTCTCCAAACCGTGGCTGCTCG...GACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679998.1
ENST00000680110.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp GCAATTTTGCCTACACTGCACTTCCTGTCCTGGAGCCTGAAACAGTCTGAGTCTCTTTCCAGACCCAACTaGACCCACCAAAAGAATACG +
Preference number: 4 (lower is better)
Translates to: AILPTLHFLSWSLKQSESLSRPN*THQKNT
Trigger: CGTATTCTTTTGGTGGGTCCAGTTGGGTCTGGAAAG...AGACTCAGACTGTTTCAGGCTCCAGGACAGGAAGTGCAGTGTAGGCAAAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp TCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCCTTTCCAGACCCAACTaGACCCACCAAAAGAATACG +
Preference number: 4 (lower is better)
Translates to: SIEIDSHCGTPVQAGPNVLSRPN*THQKNT
Trigger: CGTATTCTTTTGGTGGGTCCAGTTGGGTCTGGAAAG...GACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
CDS-3UTR CCA 90 bp ATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGACTTTCCAGACCCAACTaGACCCACCAAAAGAATACG +
Preference number: 4 (lower is better)
Translates to: IEIDSHCGTPVQAGPNVRLSRPN*THQKNT
Trigger: CGTATTCTTTTGGTGGGTCCAGTTGGGTCTGGAAAG...TCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
CDS-3UTR CCA 90 bp TGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCCAACCTTTTAAGATGTaGGGAATGTCATCCATGCAC +
Preference number: 4 (lower is better)
Translates to: WYGNMEGWFAVGPILAHRQPFKM*GMSSMH
Trigger: GTGCATGGATGACATTCCCCACATCTTAAAAGGTTG...GCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp CTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACCAACCTTTTAAGATGTaGGGAATGTCATCCATGCAC +
Preference number: 4 (lower is better)
Translates to: LSLRHTSTGWAKCQNQGNQPFKM*GMSSMH
Trigger: GTGCATGGATGACATTCCCCACATCTTAAAAGGTTG...GTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp TGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGCACACCAGTACAGGCTaGGCCAAATGTCAGAATCAA +
Preference number: 4 (lower is better)
Translates to: CSRTYLSPPLLRFWPLNLHTSTG*AKCQNQ
Trigger: TTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTG...CAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp ATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGACACACCAGTACAGGCTaGGCCAAATGTCAGAATCAA +
Preference number: 4 (lower is better)
Translates to: IEIDSHCGTPVQAGPNVRHTSTG*AKCQNQ
Trigger: TTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTG...TCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp TGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGGGAAATATGGAGGGGTaGTTTGCAGTAGGACCTATC +
Preference number: 4 (lower is better)
Translates to: CSRTYLSPPLLRFWPLNLGNMEG*FAVGPI
Trigger: GATAGGTCCTACTGCAAACCACCCCTCCATATTTCC...CAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp ATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAGGAAATATGGAGGGGTaGTTTGCAGTAGGACCTATC +
Preference number: 4 (lower is better)
Translates to: IEIDSHCGTPVQAGPNVRGNMEG*FAVGPI
Trigger: GATAGGTCCTACTGCAAACCACCCCTCCATATTTCC...TCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp TCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCGGAAATATGGAGGGGTaGTTTGCAGTAGGACCTATC +
Preference number: 4 (lower is better)
Translates to: SIEIDSHCGTPVQAGPNVGNMEG*FAVGPI
Trigger: GATAGGTCCTACTGCAAACCACCCCTCCATATTTCC...GACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTTTGCAGTGGAGATaGGGTTTCATCATGTTGCCC +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGFLQWR*GFIMLP
Trigger: GGGCAACATGATGAAACCCCATCTCCACTGCAAAAA...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000680110.1
CDS-3UTR CCA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTAATTGCCCCCAGCTATaGTTGTGGAGGGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCNCPQL*LWRGSV
Trigger: CACACTGCCCCTCCACAACCATAGCTGGGGGCAATT...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370751.10
3UTR CAA 72 bp CCTAACGTGCCCATTCACACCACAGAGGCTCTAGCATaGACATTTCAACTGTCTCCACAACATCACTCTCAC +
Preference number: 4 (lower is better)
Translates to: PNVPIHTTEALA*TFQLSPQHHSH
Trigger: GTGAGAGTGATGTTGTGGAGACAGTTGAAATGTCAATGCTAGAGCCTCTGTGGTGTGAATGGGCACGTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp TCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCATTAACTGTTCTGTCTaGTTTATCGAGCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: SIEIDSHCGTPVQAGPNVINCSV*FIEQPR
Trigger: CCGTGGCTGCTCGATAAATCAGACAGAACAGTTAAT...GACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679998.1
ENST00000680110.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp ATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCCAGTCACATGGCCATaGAAAATAGACTTGACTGAA +
Preference number: 4 (lower is better)
Translates to: MVRKYGGVVCSRTYLSPPPVTWP*KIDLTE
Trigger: TTCAGTCAAGTCTATTTTTCATGGCCATGTGACTGG...CGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
CDS-3UTR TCA 90 bp TCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATTCATGACCCGGCTTTaGGAAGTCATAGATCTACTC +
Preference number: 4 (lower is better)
Translates to: SLRHTSTGWAKCQNQGNLFMTRL*EVIDLL
Trigger: GAGTAGATCTATGACTTCTCAAAGCCGGGTCATGAA...TAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR TCA 90 bp TCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCTTCATGACCCGGCTTTaGGAAGTCATAGATCTACTC +
Preference number: 4 (lower is better)
Translates to: SIEIDSHCGTPVQAGPNVFMTRL*EVIDLL
Trigger: GAGTAGATCTATGACTTCTCAAAGCCGGGTCATGAA...GACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR TCA 90 bp TGTAAATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCGCTGTCAATAGAGATTaGCTCTCATTGCGGCACACC +
Preference number: 4 (lower is better)
Translates to: CKWYGNMEGWFAVGPILAAVNRD*LSLRHT
Trigger: GGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGC...GGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCATTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp GAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCACTCTCACTTTAAGATaGTATTCTCCCAGCCAACAC +
Preference number: 4 (lower is better)
Translates to: EIDSHCGTPVQAGPNVRITLTLR*YSPSQH
Trigger: GTGTTGGCTGGGAGAATATCATCTTAAAGTGAGAGT...GATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR GCA 90 bp GTCAGAATCAAGGCAACTTATCTCAAATGCAGGGCTGTAACGCTCTCTCAATTGGGGGAATGTCATCCATaGACAGTCCTGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VRIKATYLKCRAVTLSQLGECHP*TVLLLL
Trigger: CAGAAGGAGCAGGACTGTGCATGGATGACATTCCCC...CAATTGAGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGCCTTGATTCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476521.5
ENST00000681501.1
CDS-3UTR GCA 90 bp TGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGGCAACTTATCTCAAATaGAGGGCTGTAACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: CSRTYLSPPLLRFWPLNLATYLK*RAVTLS
Trigger: AGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGC...CAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp TCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTAGCAACTTATCTCAAATaGAGGGCTGTAACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SLRHTSTGWAKCQNQGNLATYLK*RAVTLS
Trigger: AGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGC...TAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp AGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATCAATTTTGCCTACACTaGACTTCCTGTCCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: RTYLSPPLLRFWPLNLRYQFCLH*TSCPGA
Trigger: GGCTCCAGGACAGGAAGTGCAGTGTAGGCAAAATTG...ATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp CAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATCTCAAATGCAGGGCTGTACGAGCAGCCACGGTTTaGAGACAGAAAGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: QAGPNVRIKATYLKCRAVRAATV*RQKVLK
Trigger: CTTAAGAACTTTCTGTCTCCAAACCGTGGCTGCTCG...TACAGCCCTGCATTTGAGATAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476521.5
ENST00000681501.1
CDS-3UTR CCA 90 bp ATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCAACCTTTTAAGATGTaGGGAATGTCATCCATGCAC +
Preference number: 4 (lower is better)
Translates to: MVRKYGGVVCSRTYLSPPQPFKM*GMSSMH
Trigger: GTGCATGGATGACATTCCCCACATCTTAAAAGGTTG...CGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTCCTGTCCTTCAGAGATaGAGAGGTGATAAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGPVLQR*RGDKSR
Trigger: TCTACTTTTATCACCTCTCCATCTCTGAAGGACAGG...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp GAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCCCTGTCCTTCAGAGATaGAGAGGTGATAAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: EIDSHCGTPVQAGPNVRIPVLQR*RGDKSR
Trigger: TCTACTTTTATCACCTCTCCATCTCTGAAGGACAGG...GATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp GGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCACCTGTCCTTCAGAGATaGAGAGGTGATAAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: GNMEGWFAVGPILAHRFSPVLQR*RGDKSR
Trigger: TCTACTTTTATCACCTCTCCATCTCTGAAGGACAGG...TGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTATGCCTAGCATTTTATaGACATTCATGACCCGGCTT +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGMPSIL*TFMTRL
Trigger: AAGCCGGGTCATGAATGTCCATAAAATGCTAGGCAT...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR CCA 90 bp TTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGATGCCTAGCATTTTATaGACATTCATGACCCGGCTT +
Preference number: 4 (lower is better)
Translates to: LTLIAAHQYRLGQMSESRMPSIL*TFMTRL
Trigger: AAGCCGGGTCATGAATGTCCATAAAATGCTAGGCAT...CCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR CCA 90 bp GCTGGGCCAAATGTCAGAATCAAGGCAACTTATCTCAAATGCAGGGCTGTAACGCACACCAGTACAGGCTaGGCCAAATGTCAGAATCAA +
Preference number: 4 (lower is better)
Translates to: AGPNVRIKATYLKCRAVTHTSTG*AKCQNQ
Trigger: TTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTG...CGTTACAGCCCTGCATTTGAGATAAGTTGCCTTGATTCTGACATTTGGCCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476521.5
ENST00000681501.1
CDS-3UTR CCA 90 bp TCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTCCGCTTCTCAGGTTTTaGCCTTTGAACTTGAGATAT +
Preference number: 4 (lower is better)
Translates to: SHCGTPVQAGPNVRIKATPLLRF*PLNLRY
Trigger: ATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGG...AGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp TTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCCGCTTCTCAGGTTTTaGCCTTTGAACTTGAGATAT +
Preference number: 4 (lower is better)
Translates to: LTLIAAHQYRLGQMSESRPLLRF*PLNLRY
Trigger: ATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGG...CCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp CATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATTTTTTGCAGTGGAGATaGGGTTTCATCATGTTGCCC +
Preference number: 4 (lower is better)
Translates to: HCGTPVQAGPNVRIKATYFLQWR*GFIMLP
Trigger: GGGCAACATGATGAAACCCCATCTCCACTGCAAAAA...ATAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000680110.1
CDS-3UTR CCA 90 bp TCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATCTCCCAACCAACAATaGTCATGGCTTGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLRHTSTGWAKCQNQGNLSPNQQ*SWLVFS
Trigger: GGAGAAAACAAGCCATGACCATTGTTGGTTGGGAGA...TAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTCTGTCCTCCACAAATTaGTCCATAGACTCATCAGAT +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGLSSTN*SIDSSD
Trigger: ATCTGATGAGTCTATGGACCAATTTGTGGAGGACAG...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp AGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAATAGAATCGTGGAGCTaGATGCTGTTCAAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RLTLIAAHQYRLGQMSESIESWS*MLFKAK
Trigger: CTTGGCTTTGAACAGCATCCAGCTCCACGATTCTAT...TGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679998.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp CTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTCTTAAGAGATCTGTaGCTTCAGAGACTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LSLRHTSTGWAKCQNQGNFLRDL*LQRLFS
Trigger: GGAAAAGAGTCTCTGAAGCCACAGATCTCTTAAGAA...GTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679998.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp AGCAGGCTGTCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGAGATCAGGCTTAAATTaGGGATTAACTGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SRLSIEIDSHCGTPVQAGRSGLN*GLTVLS
Trigger: AGACAGAACAGTTAATCCTCAATTTAAGCCTGATCT...CCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679998.1
ENST00000680110.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp CTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACAGATCAGGCTTAAATTaGGGATTAACTGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LSLRHTSTGWAKCQNQGNRSGLN*GLTVLS
Trigger: AGACAGAACAGTTAATCCTCAATTTAAGCCTGATCT...GTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679998.1
ENST00000680110.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp TGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGCCAGTCACATGGCCATaGAAAATAGACTTGACTGAA +
Preference number: 4 (lower is better)
Translates to: CSRTYLSPPLLRFWPLNLPVTWP*KIDLTE
Trigger: TTCAGTCAAGTCTATTTTTCATGGCCATGTGACTGG...CAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
CDS-3UTR TCA 90 bp CTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTACGGGAATTAAACTaGTATCTGTCTGGCATACAA +
Preference number: 4 (lower is better)
Translates to: LSLRHTSTGWAKCQNQGNLRELN*YLSGIQ
Trigger: TTGTATGCCAGACAGATATCAGTTTAATTCCCGTAA...GTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp ACTCCTTCTCTTCCTTGCAGGATCTCCAACTCCTTCATAAGGGCACTCTGTGTTTTCATGACCCGGCTTTaGGAAGTCATAGATCTACTC +
Preference number: 4 (lower is better)
Translates to: TPSLPCRISNSFIRALCVFMTRL*EVIDLL
Trigger: GAGTAGATCTATGACTTCTCAAAGCCGGGTCATGAA...AACACAGAGTGCCCTTATGAAGGAGTTGGAGATCCTGCAAGGAAGAGAAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp GTCAGAATCAAGGCAACTTATCTCAAATGCAGGGCTGTAACGCTCTCTCAATTGGCTGTCAATAGAGATTaGCTCTCATTGCGGCACACC +
Preference number: 4 (lower is better)
Translates to: VRIKATYLKCRAVTLSQLAVNRD*LSLRHT
Trigger: GGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGC...CAATTGAGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGCCTTGATTCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476521.5
ENST00000681501.1
CDS-3UTR TCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTGGATGTTGGGTCAAATaGAATGTTCCTCATTGTTTC +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGGCWVK*NVPHCF
Trigger: GAAACAATGAGGAACATTTCATTTGACCCAACATCC...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp GGCTTTTGGTTGCAGGATTCCATGACGACTTTGATCAGCCTTGCCATCTTGTGGATTAGGAATGGGATTTaGGGGCTTCCAAATTCCCAT +
Preference number: 4 (lower is better)
Translates to: GFWLQDSMTTLISLAILWIRNGI*GLPNSH
Trigger: ATGGGAATTTGGAAGCCCTCAAATCCCATTCCTAAT...CCACAAGATGGCAAGGCTGATCAAAGTCGTCATGGAATCCTGCAACCAAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp TTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGGAGCCTGAAACAGTCTaGGTCTATTTGTTTGAATTG +
Preference number: 4 (lower is better)
Translates to: LTLIAAHQYRLGQMSESREPETV*VYLFEL
Trigger: CAATTCAAACAAATAGACTCAGACTGTTTCAGGCTC...CCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp AGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCATTCCAAATCCGGCTTTaGGAAGTCATAGATCTACTC +
Preference number: 4 (lower is better)
Translates to: RLTLIAAHQYRLGQMSESFQIRL*EVIDLL
Trigger: GAGTAGATCTATGACTTCTCAAAGCCGGATTTGGAA...TGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681501.1
CDS-3UTR GCA 90 bp AGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCATACATCCCTGACGGCTaGATCTTTCAACCATATCTT +
Preference number: 4 (lower is better)
Translates to: RLTLIAAHQYRLGQMSESYIPDG*IFQPYL
Trigger: AAGATATGGTTGAAAGATGCAGCCGTCAGGGATGTA...TGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR GCA 90 bp TGTAAATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCAGCATCTGCCTCAGTaGAGAGAGGATGAGAATATC +
Preference number: 4 (lower is better)
Translates to: CKWYGNMEGWFAVGPILAQHLPQ*REDENI
Trigger: GATATTCTCATCCTCTCTGCACTGAGGCAGATGCTG...GGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCATTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTGAGATTGACTCTCATTaGGGCACACCAGTACAGGCT +
Preference number: 4 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCEIDSH*GTPVQA
Trigger: AGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp TGTAAATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCTATGGAGGGGTGGTTTaGAGTAGGACCTATCTTAGC +
Preference number: 4 (lower is better)
Translates to: CKWYGNMEGWFAVGPILAYGGVV*SRTYLS
Trigger: GCTAAGATAGGTCCTACTGCAAACCACCCCTCCATA...GGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCATTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp TGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCATTGGTGTGTTACTGTaGAATAAGAACAACTCTGGT +
Preference number: 4 (lower is better)
Translates to: WYGNMEGWFAVGPILAHRIGVLL*NKNNSG
Trigger: ACCAGAGTTGTTCTTATTGCACAGTAACACACCAAT...GCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR GCA 90 bp TGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCAAACTCTTTCTCTACTaGAATACCTGCTGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: WYGNMEGWFAVGPILAHRKLFLY*NTCCFG
Trigger: ACCAAAACAGCAGGTATTGCAGTAGAGAAAGAGTTT...GCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR GCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTGTGCCCTCAATTTTTaGAATTTTGCCTACACTGCA +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGCALNF*NFAYTA
Trigger: TGCAGTGTAGGCAAAATTGCAAAAATTGAGGGCACA...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp TCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTACCTGTCCTTCAGAGATaGAGAGGTGATAAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: SLRHTSTGWAKCQNQGNLPVLQR*RGDKSR
Trigger: TCTACTTTTATCACCTCTCCATCTCTGAAGGACAGG...TAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp AGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCACCTGTCCTTCAGAGATaGAGAGGTGATAAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: RLTLIAAHQYRLGQMSESPVLQR*RGDKSR
Trigger: TCTACTTTTATCACCTCTCCATCTCTGAAGGACAGG...TGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp ATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGACCTGTCCTTCAGAGATaGAGAGGTGATAAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: IEIDSHCGTPVQAGPNVRPVLQR*RGDKSR
Trigger: TCTACTTTTATCACCTCTCCATCTCTGAAGGACAGG...TCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp CATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATCCTGTCCTTCAGAGATaGAGAGGTGATAAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: HCGTPVQAGPNVRIKATYPVLQR*RGDKSR
Trigger: TCTACTTTTATCACCTCTCCATCTCTGAAGGACAGG...ATAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp TGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGATGCCTAGCATTTTATaGACATTCATGACCCGGCTT +
Preference number: 4 (lower is better)
Translates to: CSRTYLSPPLLRFWPLNLMPSIL*TFMTRL
Trigger: AAGCCGGGTCATGAATGTCCATAAAATGCTAGGCAT...CAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR CCA 90 bp CATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATATGCCTAGCATTTTATaGACATTCATGACCCGGCTT +
Preference number: 4 (lower is better)
Translates to: HCGTPVQAGPNVRIKATYMPSIL*TFMTRL
Trigger: AAGCCGGGTCATGAATGTCCATAAAATGCTAGGCAT...ATAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR CCA 90 bp AGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAATGCCTAGCATTTTATaGACATTCATGACCCGGCTT +
Preference number: 4 (lower is better)
Translates to: RLTLIAAHQYRLGQMSESMPSIL*TFMTRL
Trigger: AAGCCGGGTCATGAATGTCCATAAAATGCTAGGCAT...TGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR CCA 90 bp TCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTACCGCTTCTCAGGTTTTaGCCTTTGAACTTGAGATAT +
Preference number: 4 (lower is better)
Translates to: SLRHTSTGWAKCQNQGNLPLLRF*PLNLRY
Trigger: ATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGG...TAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp ATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGACCGCTTCTCAGGTTTTaGCCTTTGAACTTGAGATAT +
Preference number: 4 (lower is better)
Translates to: IEIDSHCGTPVQAGPNVRPLLRF*PLNLRY
Trigger: ATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGG...TCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp CACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATCTCAAATGGGAAATATGGAGGGGTaGTTTGCAGTAGGACCTATC +
Preference number: 4 (lower is better)
Translates to: HTSTGWAKCQNQGNLSQMGNMEG*FAVGPI
Trigger: GATAGGTCCTACTGCAAACCACCCCTCCATATTTCC...CATTTGAGATAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681501.1
CDS-3UTR CCA 90 bp TGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCAAACTGAATTGTAAATaGTACGGAAATATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: WYGNMEGWFAVGPILAHRKLNCK*YGNMEG
Trigger: CCCCTCCATATTTCCGTACCATTTACAATTCAGTTT...GCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp AGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAATACTTATGTCTCTCTaGGCCTGCATACCTCATAGA +
Preference number: 4 (lower is better)
Translates to: RLTLIAAHQYRLGQMSESILMSL*ACIPHR
Trigger: TCTATGAGGTATGCAGGCCCAGAGAGACATAAGTAT...TGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp GCAATTTTGCCTACACTGCACTTCCTGTCCTGGAGCCTGAAACAGTCTGAGTCTAGTAGAGAGTTTATTTaGGCCAAGCATGAGGGTTAC +
Preference number: 4 (lower is better)
Translates to: AILPTLHFLSWSLKQSESSREFI*AKHEGY
Trigger: GTAACCCTCATGCTTGGCCCAAATAAACTCTCTACT...AGACTCAGACTGTTTCAGGCTCCAGGACAGGAAGTGCAGTGTAGGCAAAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp TGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCGCAAGGGTGTACAATTaGTATGCAAGTTTTTATCCT +
Preference number: 4 (lower is better)
Translates to: WYGNMEGWFAVGPILAHRARVYN*YASFYP
Trigger: AGGATAAAAACTTGCATACCAATTGTACACCCTTGC...GCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp TACACATTACCCAGCACAGTAACCCCTCTTGGTATTGTTGACCTAAAAGGAAGACTGCACTTCCTGTCCTaGAGCCTGAAACAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: YTLPSTVTPLGIVDLKGRLHFLS*SLKQSE
Trigger: CTCAGACTGTTTCAGGCTCCAGGACAGGAAGTGCAG...TCTTCCTTTTAGGTCAACAATACCAAGAGGGGTTACTGTGCTGGGTAATGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp TCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCCAAGCCTGTCTGCACTaGAACAAACAGATGATGATT +
Preference number: 4 (lower is better)
Translates to: SIEIDSHCGTPVQAGPNVQACLH*NKQMMI
Trigger: AATCATCATCTGTTTGTTCCAGTGCAGACAGGCTTG...GACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679998.1
CDS-3UTR TCA 90 bp GAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAGATCAGGCTTAAATTaGGGATTAACTGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: EIDSHCGTPVQAGPNVRIRSGLN*GLTVLS
Trigger: AGACAGAACAGTTAATCCTCAATTTAAGCCTGATCT...GATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679998.1
ENST00000680110.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp GGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAAGATCAGGCTTAAATTaGGGATTAACTGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GNMEGWFAVGPILAHRFSRSGLN*GLTVLS
Trigger: AGACAGAACAGTTAATCCTCAATTTAAGCCTGATCT...TGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679998.1
ENST00000680110.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp TCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTTACGGGAATTAAACTaGTATCTGTCTGGCATACAA +
Preference number: 4 (lower is better)
Translates to: SHCGTPVQAGPNVRIKATLRELN*YLSGIQ
Trigger: TTGTATGCCAGACAGATATCAGTTTAATTCCCGTAA...AGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp GGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCATTACGGGAATTAAACTaGTATCTGTCTGGCATACAA +
Preference number: 4 (lower is better)
Translates to: GNMEGWFAVGPILAHRFSLRELN*YLSGIQ
Trigger: TTGTATGCCAGACAGATATCAGTTTAATTCCCGTAA...TGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTTACGGGAATTAAACTaGTATCTGTCTGGCATACAA +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGLRELN*YLSGIQ
Trigger: TTGTATGCCAGACAGATATCAGTTTAATTCCCGTAA...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp TTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGTTACGGGAATTAAACTaGTATCTGTCTGGCATACAA +
Preference number: 4 (lower is better)
Translates to: LTLIAAHQYRLGQMSESRLRELN*YLSGIQ
Trigger: TTGTATGCCAGACAGATATCAGTTTAATTCCCGTAA...CCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp AGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATTTCATGACCCGGCTTTaGGAAGTCATAGATCTACTC +
Preference number: 4 (lower is better)
Translates to: RTYLSPPLLRFWPLNLRYFMTRL*EVIDLL
Trigger: GAGTAGATCTATGACTTCTCAAAGCCGGGTCATGAA...ATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR TCA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTCTCAATCAATCATCCTaGGTAACTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCLNQSS*VTGTTG
Trigger: GCCTGTAGTCCCAGTTACTCAGGATGATTGATTGAG...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370751.10
ENST00000679848.1
CDS-3UTR TCA 90 bp TTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGGACACATGGCTAGGATaGTTTGGAATTCAATTAATG +
Preference number: 4 (lower is better)
Translates to: LTLIAAHQYRLGQMSESRDTWLG*FGIQLM
Trigger: CATTAATTGAATTCCAAATCATCCTAGCCATGTGTC...CCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp CCTTTAAGCCAATTCCCTGTAGCTACTTACAGCATGACTGTTAGCTCCTTTCCTCACCAAAGGGTTGGGTaGATTATGGCCCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: PLSQFPVATYSMTVSSFPHQRVG*IMAQKL
Trigger: CAACTTTTGGGCCATAATTCACCCAACCCTTTGGTG...AGGAAAGGAGCTAACAGTCATGCTGTAAGTAGCTACAGGGAATTGGCTTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp CATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATGGTACAGCTGAACATTaGCTGTACTTCTATATCCAT +
Preference number: 4 (lower is better)
Translates to: HCGTPVQAGPNVRIKATYGTAEH*LYFYIH
Trigger: ATGGATATAGAAGTACAGTCAATGTTCAGCTGTACC...ATAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp GGCTTTTGGTTGCAGGATTCCATGACGACTTTGATCAGCCTTGCCATCTTGTGGTTGTTTGAATTGTGTTaGGGAAGGAAGTGGGATTGT +
Preference number: 4 (lower is better)
Translates to: GFWLQDSMTTLISLAILWLFELC*GRKWDC
Trigger: ACAATCCCACTTCCTTCCTCAACACAATTCAAACAA...CCACAAGATGGCAAGGCTGATCAAAGTCGTCATGGAATCCTGCAACCAAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp AATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTCTGAGTCTATTTGTTTaGATTGTGTTGAGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: NMEGWFAVGPILAHRFSGLSLFV*IVLRKE
Trigger: TTCCTTCCTCAACACAATTCAAACAAATAGACTCAG...ACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR GCA 90 bp ACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAAAGAAGCCTATTTCTGTaGTCTCTGGCTTTAATTATC +
Preference number: 4 (lower is better)
Translates to: TLIAAHQYRLGQMSESRQRSLFL*SLALII
Trigger: GATAATTAAAGCCAGAGAGCACAGAAATAGGCTTCT...TTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
CDS-3UTR GCA 90 bp TGTAAATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCGCAACTTATCTCAAATaGAGGGCTGTAACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: CKWYGNMEGWFAVGPILAATYLK*RAVTLS
Trigger: AGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGC...GGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCATTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp TACACATTACCCAGCACAGTAACCCCTCTTGGTATTGTTGACCTAAAAGGAAGAGAGATTGACTCTCATTaGGGCACACCAGTACAGGCT +
Preference number: 4 (lower is better)
Translates to: YTLPSTVTPLGIVDLKGREIDSH*GTPVQA
Trigger: AGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC...TCTTCCTTTTAGGTCAACAATACCAAGAGGGGTTACTGTGCTGGGTAATGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR GCA 90 bp TGTAAATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCAATGGCAAGTATGCTTaGTCATTACCAGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: CKWYGNMEGWFAVGPILANGKYA*SLPGTV
Trigger: CACAGTGCCTGGTAATGAGCAAGCATACTTGCCATT...GGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCATTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp TACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCACTTTCTTACTGATTTaGCCCAGTAACCTAAATGGA +
Preference number: 4 (lower is better)
Translates to: YGNMEGWFAVGPILAHRFTFLLI*PSNLNG
Trigger: TCCATTTAGGTTACTGGGGCAAATCAGTAAGAAAGT...GAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR GCA 90 bp ATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGACTTCAGCACCTTACCTaGCTTTCTCTTAAAAATCCT +
Preference number: 4 (lower is better)
Translates to: IEIDSHCGTPVQAGPNVRLQHLT*LSLKNP
Trigger: AGGATTTTTAAGAGAAAGGCAGGTAAGGTGCTGAAG...TCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR GCA 90 bp ATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAAAAATGAAGATAATGTaGAAGGCAGCTAGTCGGGAA +
Preference number: 4 (lower is better)
Translates to: IEIDSHCGTPVQAGPNVRKMKIM*KAASRE
Trigger: TTCCCGACTAGCTGCCTTGCACATTATCTTCATTTT...TCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp GGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAAAACTGAATTGTAAATaGTACGGAAATATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GNMEGWFAVGPILAHRFSKLNCK*YGNMEG
Trigger: CCCCTCCATATTTCCGTACCATTTACAATTCAGTTT...TGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp TACACATTACCCAGCACAGTAACCCCTCTTGGTATTGTTGACCTAAAAGGAAGAATCATCCTGAGTAACTaGGACTACAGGCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: YTLPSTVTPLGIVDLKGRIILSN*DYRHVP
Trigger: TGGCACGTGCCTGTAGTCCCAGTTACTCAGGATGAT...TCTTCCTTTTAGGTCAACAATACCAAGAGGGGTTACTGTGCTGGGTAATGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp ATGGTGAACCTTCAATCACCTTCAGTCTCCCAACCAACAATGGTCATGGCTTGTGCTTCCAAATTCCCATaGCTTTTGGTTGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: MVNLQSPSVSQPTMVMACASKFP*LLVAGF
Trigger: GAATCCTGCAACCAAAAGCCATGGGAATTTGGAAGC...ACAAGCCATGACCATTGTTGGTTGGGAGACTGAAGGTGATTGAAGGTTCACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp TGTAAATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCATAGAATCGTGGAGCTaGATGCTGTTCAAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: CKWYGNMEGWFAVGPILAIESWS*MLFKAK
Trigger: CTTGGCTTTGAACAGCATCCAGCTCCACGATTCTAT...GGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCATTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679998.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp TCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATTCTTAAGAGATCTGTaGCTTCAGAGACTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SLRHTSTGWAKCQNQGNLFLRDL*LQRLFS
Trigger: GGAAAAGAGTCTCTGAAGCCACAGATCTCTTAAGAA...TAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679998.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTATTAACTGTTCTGTCTaGTTTATCGAGCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCINCSV*FIEQPR
Trigger: CCGTGGCTGCTCGATAAATCAGACAGAACAGTTAAT...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679998.1
ENST00000680110.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp TCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGATCAGGCTTAAATTaGGGATTAACTGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SIEIDSHCGTPVQAGPNVRSGLN*GLTVLS
Trigger: AGACAGAACAGTTAATCCTCAATTTAAGCCTGATCT...GACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679998.1
ENST00000680110.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp TCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCTTCTCTATATTTTATTaGGGTAGATGGTGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: SIEIDSHCGTPVQAGPNVFSIFY*GRWWVS
Trigger: ACTCACCCACCATCTACCTCAATAAAATATAGAGAA...GACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp TCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCGGAGACAAGTTGTCCTaGACAATACACATTCTTATT +
Preference number: 4 (lower is better)
Translates to: SIEIDSHCGTPVQAGPNVGDKLS*TIHILI
Trigger: AATAAGAATGTGTATTGTTCAGGACAACTTGTCTCC...GACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp CAGAATCAAGGCAACTTATCTCAAATGCAGGGCTGTAACGCTCTCTCAATTGCACCACACAGTGAATCCTaGTATCTGTCTGGCATACAA +
Preference number: 4 (lower is better)
Translates to: QNQGNLSQMQGCNALSIAPHSES*YLSGIQ
Trigger: TTGTATGCCAGACAGATATCAGGATTCACTGTGTGG...TGCAATTGAGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGCCTTGATTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476521.5
CDS-3UTR GCA 90 bp AAGATGTCACAGAAACTGAATTGTAAATGGTACGGAAATATGGAGGGGTGGTTTGGGGAATGTCATCCATaGACAGTCCTGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KMSQKLNCKWYGNMEGWFGECHP*TVLLLL
Trigger: CAGAAGGAGCAGGACTGTGCATGGATGACATTCCCC...AAACCACCCCTCCATATTTCCGTACCATTTACAATTCAGTTTCTGTGACATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTGCAACTTATCTCAAATaGAGGGCTGTAACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCATYLK*RAVTLS
Trigger: AGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGC...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR GCA 90 bp GTCAGAATCAAGGCAACTTATCTCAAATGCAGGGCTGTAACGCTCTCTCAATTGGCAACTTATCTCAAATaGAGGGCTGTAACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VRIKATYLKCRAVTLSQLATYLK*RAVTLS
Trigger: AGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGC...CAATTGAGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGCCTTGATTCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476521.5
ENST00000681501.1
CDS-3UTR GCA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTAATGGCAAGTATGCTTaGTCATTACCAGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCNGKYA*SLPGTV
Trigger: CACAGTGCCTGGTAATGAGCAAGCATACTTGCCATT...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp TGTAAATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCAACCTTTTAAGATGTaGGGAATGTCATCCATGCAC +
Preference number: 4 (lower is better)
Translates to: CKWYGNMEGWFAVGPILAQPFKM*GMSSMH
Trigger: GTGCATGGATGACATTCCCCACATCTTAAAAGGTTG...GGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCATTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp ATGGTGAACCTTCAATCACCTTCAGTCTCCCAACCAACAATGGTCATGGCTTGTCCGCTTCTCAGGTTTTaGCCTTTGAACTTGAGATAT +
Preference number: 4 (lower is better)
Translates to: MVNLQSPSVSQPTMVMACPLLRF*PLNLRY
Trigger: ATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGG...ACAAGCCATGACCATTGTTGGTTGGGAGACTGAAGGTGATTGAAGGTTCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp CATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATAAACTGAATTGTAAATaGTACGGAAATATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HCGTPVQAGPNVRIKATYKLNCK*YGNMEG
Trigger: CCCCTCCATATTTCCGTACCATTTACAATTCAGTTT...ATAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp TGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAAACTGAATTGTAAATaGTACGGAAATATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CSRTYLSPPLLRFWPLNLKLNCK*YGNMEG
Trigger: CCCCTCCATATTTCCGTACCATTTACAATTCAGTTT...CAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp CATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATCAATACCTGCTGTTTTaGTATATTGGTGTGTTACTG +
Preference number: 4 (lower is better)
Translates to: HCGTPVQAGPNVRIKATYQYLLF*YIGVLL
Trigger: CAGTAACACACCAATATACCAAAACAGCAGGTATTG...ATAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp TACTTATGTCTCTCTGGGCCTGCATACCTCATAGAACTCAAACTGCTCTATTTTAGGGCCTATAGTCTCTaGTGTCTGCTAGAAGCCTAT +
Preference number: 4 (lower is better)
Translates to: YLCLSGPAYLIELKLLYFRAYSL*CLLEAY
Trigger: ATAGGCTTCTAGCAGACATCAGAGACTATAGGCCCT...AAAATAGAGCAGTTTGAGTTCTATGAGGTATGCAGGCCCAGAGAGACATAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp CCTTTAAGCCAATTCCCTGTAGCTACTTACAGCATGACTGTTAGCTCCTTTCCTCCAGTCACATGGCCATaGAAAATAGACTTGACTGAA +
Preference number: 4 (lower is better)
Translates to: PLSQFPVATYSMTVSSFPPVTWP*KIDLTE
Trigger: TTCAGTCAAGTCTATTTTTCATGGCCATGTGACTGG...AGGAAAGGAGCTAACAGTCATGCTGTAAGTAGCTACAGGGAATTGGCTTAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp AGATGGTGGGTGAGTTTGCACAAAGCTACAAATTTCTGTCAGAAACAGTCACTTCTCAATCAATCATCCTaGGTAACTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: RWWVSLHKATNFCQKQSLLNQSS*VTGTTG
Trigger: GCCTGTAGTCCCAGTTACTCAGGATGATTGATTGAG...AAGTGACTGTTTCTGACAGAAATTTGTAGCTTTGTGCAAACTCACCCACCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR GCA 90 bp ATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAAAACGACACACCAGTTaGTCATCAATAATTTTTGGT +
Preference number: 4 (lower is better)
Translates to: IEIDSHCGTPVQAGPNVRKRHTS*SSIIFG
Trigger: ACCAAAAATTATTGATGAGCAACTGGTGTGTCGTTT...TCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTCAACCTTTTAAGATGTaGGGAATGTCATCCATGCAC +
Preference number: 4 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCQPFKM*GMSSMH
Trigger: GTGCATGGATGACATTCCCCACATCTTAAAAGGTTG...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp CAGAATCAAGGCAACTTATCTCAAATGCAGGGCTGTAACGCTCTCTCAATTGCACAACCTTTTAAGATGTaGGGAATGTCATCCATGCAC +
Preference number: 4 (lower is better)
Translates to: QNQGNLSQMQGCNALSIAQPFKM*GMSSMH
Trigger: GTGCATGGATGACATTCCCCACATCTTAAAAGGTTG...TGCAATTGAGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGCCTTGATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476521.5
ENST00000681501.1
CDS-3UTR CCA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTCCTGTCCTTCAGAGATaGAGAGGTGATAAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCPVLQR*RGDKSR
Trigger: TCTACTTTTATCACCTCTCCATCTCTGAAGGACAGG...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTATGCCTAGCATTTTATaGACATTCATGACCCGGCTT +
Preference number: 4 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCMPSIL*TFMTRL
Trigger: AAGCCGGGTCATGAATGTCCATAAAATGCTAGGCAT...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR CCA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTTCTCCCTGGATTACATaGAGAAAATCATGCCCTACT +
Preference number: 4 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCSPWIT*RKSCPT
Trigger: AGTAGGGCATGATTTTCTCCATGTAATCCAGGGAGA...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp AGATGGTGGGTGAGTTTGCACAAAGCTACAAATTTCTGTCAGAAACAGTCACTTGCTCCACCAAAGGGTTaGGTGAATTATGGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: RWWVSLHKATNFCQKQSLAPPKG*VNYGPK
Trigger: TTTTGGGCCATAATTCACCCAACCCTTTGGTGGAGC...AAGTGACTGTTTCTGACAGAAATTTGTAGCTTTGTGCAAACTCACCCACCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp TGTAAATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCAGATCAGGCTTAAATTaGGGATTAACTGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: CKWYGNMEGWFAVGPILARSGLN*GLTVLS
Trigger: AGACAGAACAGTTAATCCTCAATTTAAGCCTGATCT...GGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCATTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679998.1
ENST00000680110.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp TCATGGGGTCCAGTTCCAAATCTGAAGCATAATTTCCAACCATCAAAATATTGGAGGGCCTATAGTCTCTaGTGTCTGCTAGAAGCCTAT +
Preference number: 4 (lower is better)
Translates to: SWGPVPNLKHNFQPSKYWRAYSL*CLLEAY
Trigger: ATAGGCTTCTAGCAGACATCAGAGACTATAGGCCCT...CCAATATTTTGATGGTTGGAAATTATGCTTCAGATTTGGAACTGGACCCCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476521.5
CDS-3UTR TCA 90 bp TCATGGGGTCCAGTTCCAAATCTGAAGCATAATTTCCAACCATCAAAATATTGGTCAGTGCAGAGAGGATaGGAATATCCTTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: SWGPVPNLKHNFQPSKYWSVQRG*EYPSWG
Trigger: ACCCCATGAAGGATATTCTCATCCTCTCTGCACTGA...CCAATATTTTGATGGTTGGAAATTATGCTTCAGATTTGGAACTGGACCCCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476521.5
CDS-3UTR TCA 90 bp AAGATGTCACAGAAACTGAATTGTAAATGGTACGGAAATATGGAGGGGTGGTTTTCAGTGCAGAGAGGATaGGAATATCCTTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: KMSQKLNCKWYGNMEGWFSVQRG*EYPSWG
Trigger: ACCCCATGAAGGATATTCTCATCCTCTCTGCACTGA...AAACCACCCCTCCATATTTCCGTACCATTTACAATTCAGTTTCTGTGACATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp AGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATACCTTAGCATTAGATTaGGTTATGTTGCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RTYLSPPLLRFWPLNLRYTLALD*VMLLGD
Trigger: ATCTCCTAGCAACATAACTCAATCTAATGCTAAGGT...ATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR GCA 90 bp TACTTATGTCTCTCTGGGCCTGCATACCTCATAGAACTCAAACTGCTCTATTTTGCAACTTATCTCAAATaGAGGGCTGTAACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: YLCLSGPAYLIELKLLYFATYLK*RAVTLS
Trigger: AGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGC...AAAATAGAGCAGTTTGAGTTCTATGAGGTATGCAGGCCCAGAGAGACATAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp AAGATGTCACAGAAACTGAATTGTAAATGGTACGGAAATATGGAGGGGTGGTTTCGAGCAGCCACGGTTTaGAGACAGAAAGTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: KMSQKLNCKWYGNMEGWFRAATV*RQKVLK
Trigger: CTTAAGAACTTTCTGTCTCCAAACCGTGGCTGCTCG...AAACCACCCCTCCATATTTCCGTACCATTTACAATTCAGTTTCTGTGACATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679998.1
ENST00000680110.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp AAGATGTCACAGAAACTGAATTGTAAATGGTACGGAAATATGGAGGGGTGGTTTCTTTCCAGACCCAACTaGACCCACCAAAAGAATACG +
Preference number: 4 (lower is better)
Translates to: KMSQKLNCKWYGNMEGWFLSRPN*THQKNT
Trigger: CGTATTCTTTTGGTGGGTCCAGTTGGGTCTGGAAAG...AAACCACCCCTCCATATTTCCGTACCATTTACAATTCAGTTTCTGTGACATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
CDS-3UTR CCA 90 bp TGTAAATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCAAACTGAATTGTAAATaGTACGGAAATATGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CKWYGNMEGWFAVGPILAKLNCK*YGNMEG
Trigger: CCCCTCCATATTTCCGTACCATTTACAATTCAGTTT...GGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCATTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp TACTTATGTCTCTCTGGGCCTGCATACCTCATAGAACTCAAACTGCTCTATTTTTTTTTGCAGTGGAGATaGGGTTTCATCATGTTGCCC +
Preference number: 4 (lower is better)
Translates to: YLCLSGPAYLIELKLLYFFLQWR*GFIMLP
Trigger: GGGCAACATGATGAAACCCCATCTCCACTGCAAAAA...AAAATAGAGCAGTTTGAGTTCTATGAGGTATGCAGGCCCAGAGAGACATAAGTA
42% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTAGATCAGGCTTAAATTaGGGATTAACTGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCRSGLN*GLTVLS
Trigger: AGACAGAACAGTTAATCCTCAATTTAAGCCTGATCT...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679998.1
ENST00000680110.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp CCTTTAAGCCAATTCCCTGTAGCTACTTACAGCATGACTGTTAGCTCCTTTCCTTTACGGGAATTAAACTaGTATCTGTCTGGCATACAA +
Preference number: 4 (lower is better)
Translates to: PLSQFPVATYSMTVSSFPLRELN*YLSGIQ
Trigger: TTGTATGCCAGACAGATATCAGTTTAATTCCCGTAA...AGGAAAGGAGCTAACAGTCATGCTGTAAGTAGCTACAGGGAATTGGCTTAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR TCA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTTTACGGGAATTAAACTaGTATCTGTCTGGCATACAA +
Preference number: 4 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCLRELN*YLSGIQ
Trigger: TTGTATGCCAGACAGATATCAGTTTAATTCCCGTAA...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR TCA 90 bp AGATGGTGGGTGAGTTTGCACAAAGCTACAAATTTCTGTCAGAAACAGTCACTTGTACTTCTATATCCATaGTCTCACTGGCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: RWWVSLHKATNFCQKQSLVLLYP*SHWPIF
Trigger: GAAAATGGGCCAGTGAGATCATGGATATAGAAGTAC...AAGTGACTGTTTCTGACAGAAATTTGTAGCTTTGTGCAAACTCACCCACCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR GCA 90 bp TTCAGCACCTTACCTGCCTTTCTCTTAAAAATCCTAAACTTAGACTCAGCAGGGCATTTCCAAGCAGCTTaGGCAGATGATTTTCATCAT +
Preference number: 4 (lower is better)
Translates to: FSTLPAFLLKILNLDSAGHFQAA*ADDFHH
Trigger: ATGATGAAAATCATCTGCGCAAGCTGCTTGGAAATG...CCCTGCTGAGTCTAAGTTTAGGATTTTTAAGAGAAAGGCAGGTAAGGTGCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR GCA 90 bp TACACATTACCCAGCACAGTAACCCCTCTTGGTATTGTTGACCTAAAAGGAAGACTTCACCTGCAGCCTTaGTTTAGGAAATATTCCATA +
Preference number: 4 (lower is better)
Translates to: YTLPSTVTPLGIVDLKGRLHLQP*FRKYSI
Trigger: TATGGAATATTTCCTAAAGCAAGGCTGCAGGTGAAG...TCTTCCTTTTAGGTCAACAATACCAAGAGGGGTTACTGTGCTGGGTAATGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR GCA 90 bp ACGCTGTTTCTCAAAGAACTCACAATCTGTTTAAGAAGCAGATGTCTATACAATAATCGTGGAGCTGGATaGTGTTCAAAGCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: TLFLKELTICLRSRCLYNNRGAG*CSKPSL
Trigger: CAGGCTTGGCTTTGAACAGCATCCAGCTCCACGATT...ATTGTATAGACATCTGCTTCTTAAACAGATTGTGAGTTCTTTGAGAAACAGCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679998.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp TACTTATGTCTCTCTGGGCCTGCATACCTCATAGAACTCAAACTGCTCTATTTTCAACCTTTTAAGATGTaGGGAATGTCATCCATGCAC +
Preference number: 4 (lower is better)
Translates to: YLCLSGPAYLIELKLLYFQPFKM*GMSSMH
Trigger: GTGCATGGATGACATTCCCCACATCTTAAAAGGTTG...AAAATAGAGCAGTTTGAGTTCTATGAGGTATGCAGGCCCAGAGAGACATAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp AAATGTCAGAATCAAGGCAACTTATCTCAAATGCAGGGCTGTAACGCTCTCTCATTCTTAAGAGATCTGTaGCTTCAGAGACTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: KCQNQGNLSQMQGCNALSFLRDL*LQRLFS
Trigger: GGAAAAGAGTCTCTGAAGCCACAGATCTCTTAAGAA...TGAGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGCCTTGATTCTGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681501.1
CDS-3UTR TCA 90 bp AAGATGTCACAGAAACTGAATTGTAAATGGTACGGAAATATGGAGGGGTGGTTTCCAGTCACATGGCCATaGAAAATAGACTTGACTGAA +
Preference number: 4 (lower is better)
Translates to: KMSQKLNCKWYGNMEGWFPVTWP*KIDLTE
Trigger: TTCAGTCAAGTCTATTTTTCATGGCCATGTGACTGG...AAACCACCCCTCCATATTTCCGTACCATTTACAATTCAGTTTCTGTGACATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
CDS-3UTR GCA 90 bp TTCAGCACCTTACCTGCCTTTCTCTTAAAAATCCTAAACTTAGACTCAGCAGGGAGAAGCCTATTTCTGTaGTCTCTGGCTTTAATTATC +
Preference number: 4 (lower is better)
Translates to: FSTLPAFLLKILNLDSAGRSLFL*SLALII
Trigger: GATAATTAAAGCCAGAGAGCACAGAAATAGGCTTCT...CCCTGCTGAGTCTAAGTTTAGGATTTTTAAGAGAAAGGCAGGTAAGGTGCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR GCA 90 bp ACGCTGTTTCTCAAAGAACTCACAATCTGTTTAAGAAGCAGATGTCTATACAATCAGCATCTGCCTCAGTaGAGAGAGGATGAGAATATC +
Preference number: 4 (lower is better)
Translates to: TLFLKELTICLRSRCLYNQHLPQ*REDENI
Trigger: GATATTCTCATCCTCTCTGCACTGAGGCAGATGCTG...ATTGTATAGACATCTGCTTCTTAAACAGATTGTGAGTTCTTTGAGAAACAGCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp AAGATGTCACAGAAACTGAATTGTAAATGGTACGGAAATATGGAGGGGTGGTTTCAACCTTTTAAGATGTaGGGAATGTCATCCATGCAC +
Preference number: 4 (lower is better)
Translates to: KMSQKLNCKWYGNMEGWFQPFKM*GMSSMH
Trigger: GTGCATGGATGACATTCCCCACATCTTAAAAGGTTG...AAACCACCCCTCCATATTTCCGTACCATTTACAATTCAGTTTCTGTGACATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp AAGATGTCACAGAAACTGAATTGTAAATGGTACGGAAATATGGAGGGGTGGTTTATGCCTAGCATTTTATaGACATTCATGACCCGGCTT +
Preference number: 4 (lower is better)
Translates to: KMSQKLNCKWYGNMEGWFMPSIL*TFMTRL
Trigger: AAGCCGGGTCATGAATGTCCATAAAATGCTAGGCAT...AAACCACCCCTCCATATTTCCGTACCATTTACAATTCAGTTTCTGTGACATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR TCA 90 bp ACGCTGTTTCTCAAAGAACTCACAATCTGTTTAAGAAGCAGATGTCTATACAATTTCATGACCCGGCTTTaGGAAGTCATAGATCTACTC +
Preference number: 4 (lower is better)
Translates to: TLFLKELTICLRSRCLYNFMTRL*EVIDLL
Trigger: GAGTAGATCTATGACTTCTCAAAGCCGGGTCATGAA...ATTGTATAGACATCTGCTTCTTAAACAGATTGTGAGTTCTTTGAGAAACAGCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR GCA 90 bp CTGTGCAATAAGAACAACTCTGGTGAGCCTAAAATAACTTTTTCTGGTTGCCTCCTGAGCTGTACATCTTaGTTAACCGTAAAGAATGTA +
Preference number: 4 (lower is better)
Translates to: LCNKNNSGEPKITFSGCLLSCTS*LTVKNV
Trigger: TACATTCTTTACGGTTAAGCAAGATGTACAGCTCAG...GAGGCAACCAGAAAAAGTTATTTTAGGCTCACCAGAGTTGTTCTTATTGCACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CCA 90 bp CATATGCTATACCACAGTTTAATACTTCTTTGTGAACTTGCTTCACTTTTGCCAATGCCTAGCATTTTATaGACATTCATGACCCGGCTT +
Preference number: 4 (lower is better)
Translates to: HMLYHSLILLCELASLLPMPSIL*TFMTRL
Trigger: AAGCCGGGTCATGAATGTCCATAAAATGCTAGGCAT...TGGCAAAAGTGAAGCAAGTTCACAAAGAAGTATTAAACTGTGGTATAGCATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476521.5
CDS-3UTR CCA 90 bp ACGCTGTTTCTCAAAGAACTCACAATCTGTTTAAGAAGCAGATGTCTATACAATCCGCTTCTCAGGTTTTaGCCTTTGAACTTGAGATAT +
Preference number: 4 (lower is better)
Translates to: TLFLKELTICLRSRCLYNPLLRF*PLNLRY
Trigger: ATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGG...ATTGTATAGACATCTGCTTCTTAAACAGATTGTGAGTTCTTTGAGAAACAGCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CCA 90 bp ACGCTGTTTCTCAAAGAACTCACAATCTGTTTAAGAAGCAGATGTCTATACAATAACCAACAATGGTCATaGCTTGTTTTCTCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: TLFLKELTICLRSRCLYNNQQWS*LVFSLD
Trigger: ATCCAGGGAGAAAACAAGCCATGACCATTGTTGGTT...ATTGTATAGACATCTGCTTCTTAAACAGATTGTGAGTTCTTTGAGAAACAGCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR GCA 90 bp TCTCTACTGCAATACCTGCTGTTTTGGTATATTGGTGTGTTACTGTGCAATAAGGGTGTACAATTGGTATaGAAGTTTTTATCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: SLLQYLLFWYIGVLLCNKGVQLV*KFLSSL
Trigger: TAAGGAGGATAAAAACTTGCATACCAATTGTACACC...CTTATTGCACAGTAACACACCAATATACCAAAACAGCAGGTATTGCAGTAGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp TGTAAATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCTGCCCCCAGCTATGGTaGTGGAGGGGCAGTGTGGCA +
Preference number: 5 (lower is better)
Translates to: CKWYGNMEGWFAVGPILACPQLW*WRGSVA
Trigger: TGCCACACTGCCCCTCCACAACCATAGCTGGGGGCA...GGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCATTTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp TGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCGGTGGTTACCAGAGGTaGGGAAAGTCAGAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: WYGNMEGWFAVGPILAHRGGYQR*GKSEEG
Trigger: TCCTTCCTCTGACTTTCCCAACCTCTGGTAACCACC...GCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679848.1
CDS-3UTR CAA 90 bp AGCAGGCTGTCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGGTAACGCTCTCTCAATaGCACCAGTTTCCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: SRLSIEIDSHCGTPVQAGVTLSQ*HQFPQE
Trigger: CTCTTGAGGAAACTGGTGCAATTGAGAGAGCGTTAC...CCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp TGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCCTCCTGAACATTCACTaGAGCACAACTTCACCTGCA +
Preference number: 5 (lower is better)
Translates to: WYGNMEGWFAVGPILAHRLLNIH*STTSPA
Trigger: TGCAGGTGAAGTTGTGCTCAAGTGAATGTTCAGGAG...GCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp GGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCATCCCATGGCTTTTGGTaGCAGGATTCCATGACGACT +
Preference number: 5 (lower is better)
Translates to: GNMEGWFAVGPILAHRFSSHGFW*QDSMTT
Trigger: AGTCGTCATGGAATCCTGCAACCAAAAGCCATGGGA...TGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp TCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTGTAACGCTCTCTCAATaGCACCAGTTTCCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: SHCGTPVQAGPNVRIKATVTLSQ*HQFPQE
Trigger: CTCTTGAGGAAACTGGTGCAATTGAGAGAGCGTTAC...AGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp TGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCACCGCTTCTCAGGTTTaGGCCTTTGAACTTGAGATA +
Preference number: 5 (lower is better)
Translates to: WYGNMEGWFAVGPILAHRTASQV*AFELEI
Trigger: TATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGT...GCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp TACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTGGGGTTTCATCATGTaGCCCAGGCTAGTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: YGNMEGWFAVGPILAHRFWGFIM*PRLVFL
Trigger: AAGGAAAACTAGCCTGGGCAACATGATGAAACCCCA...GAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000680110.1
CDS-3UTR CAA 90 bp CTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACATTATGGCCCAAAAGTaGGTGAGGATGATGGTGAAC +
Preference number: 5 (lower is better)
Translates to: LSLRHTSTGWAKCQNQGNIMAQK*VRMMVN
Trigger: GTTCACCATCATCCTCACCAACTTTTGGGCCATAAT...GTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp ATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGGATGTTTCCCCCTTTTaGAGGCCTCCTCACCAATAT +
Preference number: 5 (lower is better)
Translates to: MVRKYGGVVCSRTYLSPPDVSPF*RPPHQY
Trigger: ATATTGGTGAGGAGGCCTCAAAAAGGGGGAAACATC...CGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp CTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACATTCATGACCCGGCTTaGAGAAGTCATAGATCTACT +
Preference number: 5 (lower is better)
Translates to: LSLRHTSTGWAKCQNQGNIHDPA*RSHRST
Trigger: AGTAGATCTATGACTTCTCAAAGCCGGGTCATGAAT...GTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR CAA 90 bp TGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCATTCATGACCCGGCTTaGAGAAGTCATAGATCTACT +
Preference number: 5 (lower is better)
Translates to: WYGNMEGWFAVGPILAHRIHDPA*RSHRST
Trigger: AGTAGATCTATGACTTCTCAAAGCCGGGTCATGAAT...GCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR CAA 90 bp TCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCGTAACGCTCTCTCAATaGCACCAGTTTCCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: SIEIDSHCGTPVQAGPNVVTLSQ*HQFPQE
Trigger: CTCTTGAGGAAACTGGTGCAATTGAGAGAGCGTTAC...GACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp CATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATGTAACGCTCTCTCAATaGCACCAGTTTCCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: HCGTPVQAGPNVRIKATYVTLSQ*HQFPQE
Trigger: CTCTTGAGGAAACTGGTGCAATTGAGAGAGCGTTAC...ATAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp TTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGACCGCTTCTCAGGTTTaGGCCTTTGAACTTGAGATA +
Preference number: 5 (lower is better)
Translates to: LTLIAAHQYRLGQMSESRTASQV*AFELEI
Trigger: TATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGT...CCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp GAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCACCGCTTCTCAGGTTTaGGCCTTTGAACTTGAGATA +
Preference number: 5 (lower is better)
Translates to: EIDSHCGTPVQAGPNVRITASQV*AFELEI
Trigger: TATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGT...GATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp TCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTACCGCTTCTCAGGTTTaGGCCTTTGAACTTGAGATA +
Preference number: 5 (lower is better)
Translates to: SHCGTPVQAGPNVRIKATTASQV*AFELEI
Trigger: TATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGT...AGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp TCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATGGGGTTTCATCATGTaGCCCAGGCTAGTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: SLRHTSTGWAKCQNQGNLWGFIM*PRLVFL
Trigger: AAGGAAAACTAGCCTGGGCAACATGATGAAACCCCA...TAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000680110.1
CDS-3UTR CAA 90 bp GGCTTTTGGTTGCAGGATTCCATGACGACTTTGATCAGCCTTGCCATCTTGTGGGATTCCATGACGACTTaGATCAGCCTTGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: GFWLQDSMTTLISLAILWDSMTT*ISLAIL
Trigger: CAAGATGGCAAGGCTGATCAAAGTCGTCATGGAATC...CCACAAGATGGCAAGGCTGATCAAAGTCGTCATGGAATCCTGCAACCAAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp GAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCATTCATGACCCGGCTTaGAGAAGTCATAGATCTACT +
Preference number: 5 (lower is better)
Translates to: EIDSHCGTPVQAGPNVRIIHDPA*RSHRST
Trigger: AGTAGATCTATGACTTCTCAAAGCCGGGTCATGAAT...GATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR CAA 90 bp TCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTATTCATGACCCGGCTTaGAGAAGTCATAGATCTACT +
Preference number: 5 (lower is better)
Translates to: SHCGTPVQAGPNVRIKATIHDPA*RSHRST
Trigger: AGTAGATCTATGACTTCTCAAAGCCGGGTCATGAAT...AGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR CAA 90 bp AGCAGGCTGTCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAACCATCAAAATATaGGAAATAGGAATGCCTAGC +
Preference number: 5 (lower is better)
Translates to: SRLSIEIDSHCGTPVQAGPTIKI*EIGMPS
Trigger: GCTAGGCATTCCTATTTCCAATATTTTGATGGTTGG...CCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR CAA 90 bp AGCAGGCTGTCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGTTTTGGCCTTTGAACTaGAGATATGACTGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: SRLSIEIDSHCGTPVQAGFWPLN*RYDCSK
Trigger: CTTGGAACAGTCATATCTCAAGTTCAAAGGCCAAAA...CCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGACAGCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp TCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCACCGCTTCTCAGGTTTaGGCCTTTGAACTTGAGATA +
Preference number: 5 (lower is better)
Translates to: SIEIDSHCGTPVQAGPNVTASQV*AFELEI
Trigger: TATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGT...GACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp AGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAACCGCTTCTCAGGTTTaGGCCTTTGAACTTGAGATA +
Preference number: 5 (lower is better)
Translates to: RLTLIAAHQYRLGQMSESTASQV*AFELEI
Trigger: TATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGT...TGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp ATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAACCGCTTCTCAGGTTTaGGCCTTTGAACTTGAGATA +
Preference number: 5 (lower is better)
Translates to: IEIDSHCGTPVQAGPNVRTASQV*AFELEI
Trigger: TATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGT...TCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp TACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCAACAATGGTCATGGCTaGTTTTCTCCCTGGATTACA +
Preference number: 5 (lower is better)
Translates to: YGNMEGWFAVGPILAHRFNNGHG*FSPWIT
Trigger: TGTAATCCAGGGAGAAAACAAGCCATGACCATTGTT...GAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp TCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCACAGAGGCTCTAGCATaGACATTTCAACTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: SIEIDSHCGTPVQAGPNVTEALA*TFQLSP
Trigger: TGGAGACAGTTGAAATGTCAATGCTAGAGCCTCTGT...GACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp TTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGAGATGGTGGGTGAGTTaGCACAAAGCTACAAATTTC +
Preference number: 5 (lower is better)
Translates to: LTLIAAHQYRLGQMSESRRWWVS*HKATNF
Trigger: GAAATTTGTAGCTTTGTGCAAACTCACCCACCATCT...CCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp GCAATTTTGCCTACACTGCACTTCCTGTCCTGGAGCCTGAAACAGTCTGAGTCTACTGTCCTCCACAAATaGGTCCATAGACTCATCAGA +
Preference number: 5 (lower is better)
Translates to: AILPTLHFLSWSLKQSESTVLHK*VHRLIR
Trigger: TCTGATGAGTCTATGGACCAATTTGTGGAGGACAGT...AGACTCAGACTGTTTCAGGCTCCAGGACAGGAAGTGCAGTGTAGGCAAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp CTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTCAATTTTTGCAATTTaGCCTACACTGCACTTCCTG +
Preference number: 5 (lower is better)
Translates to: LSLRHTSTGWAKCQNQGNSIFAI*PTLHFL
Trigger: CAGGAAGTGCAGTGTAGGCAAAATTGCAAAAATTGA...GTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS GCA 90 bp TTTGAAATAAGACATGGAGTTTTCTTGCATAACCCAGGGCTGAGCTaGTCAGTTAGGAGTCAGAGTTGGCAACATGAGAGGAAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: FEIRHGVFLHNPGLS*SVRSQSWQHERKRR
Trigger: CCTCCTCTTCCTCTCATGTTGCCAACTCTGACTCCTAACTGAGCAGCTCAGCCCTGGGTTATGCAAGAAAACTCCATGTCTTATTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476876.6
ENST00000486882.5
CDS-3UTR CAA 90 bp TGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGATTCATGACCCGGCTTaGAGAAGTCATAGATCTACT +
Preference number: 5 (lower is better)
Translates to: CSRTYLSPPLLRFWPLNLIHDPA*RSHRST
Trigger: AGTAGATCTATGACTTCTCAAAGCCGGGTCATGAAT...CAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR CAA 90 bp GGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCTTCTCACCAACCATCAAAATATaGGAAATAGGAATGCCTAGC +
Preference number: 5 (lower is better)
Translates to: GNMEGWFAVGPILAHRFSPTIKI*EIGMPS
Trigger: GCTAGGCATTCCTATTTCCAATATTTTGATGGTTGG...TGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR CAA 90 bp ATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCCACCGCCAACCATCAAAATATaGGAAATAGGAATGCCTAGC +
Preference number: 5 (lower is better)
Translates to: MVRKYGGVVCSRTYLSPPPTIKI*EIGMPS
Trigger: GCTAGGCATTCCTATTTCCAATATTTTGATGGTTGG...CGGTGGGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR CAA 90 bp AGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGTAACGCTCTCTCAATaGCACCAGTTTCCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: RTYLSPPLLRFWPLNLRYVTLSQ*HQFPQE
Trigger: CTCTTGAGGAAACTGGTGCAATTGAGAGAGCGTTAC...ATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp GAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCTTTTGGCCTTTGAACTaGAGATATGACTGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: EIDSHCGTPVQAGPNVRIFWPLN*RYDCSK
Trigger: CTTGGAACAGTCATATCTCAAGTTCAAAGGCCAAAA...GATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp TGTAAATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCTGGGGTTTCATCATGTaGCCCAGGCTAGTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: CKWYGNMEGWFAVGPILAWGFIM*PRLVFL
Trigger: AAGGAAAACTAGCCTGGGCAACATGATGAAACCCCA...GGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCATTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000680110.1
CDS-3UTR CAA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTGGTGGTTACCAGAGGTaGGGAAAGTCTGTTTCTAGG +
Preference number: 5 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCGGYQR*GKSVSR
Trigger: CCTAGAAACAGACTTTCCCAACCTCTGGTAACCACC...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459784.6
CDS CCA 90 bp GTTGATTTCATGGAGGCAGAGAGTAGCATGGTGGTTACCAGAGGTTaGGAAAGTCAGAGGAAGGAGATGATGAAAAGAGGTTGGTTAATG +
Preference number: 5 (lower is better)
Translates to: VDFMEAESSMVVTRG*ESQRKEMMKRGWLM
Trigger: CATTAACCAACCTCTTTTCATCATCTCCTTCCTCTGACTTTCCCAACCTCTGGTAACCACCATGCTACTCTCTGCCTCCATGAAATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679848.1
CDS-3UTR CAA 90 bp GCTGGGCCAAATGTCAGAATCAAGGCAACTTATCTCAAATGCAGGGCTGTAACGATTCATGACCCGGCTTaGAGAAGTCATAGATCTACT +
Preference number: 5 (lower is better)
Translates to: AGPNVRIKATYLKCRAVTIHDPA*RSHRST
Trigger: AGTAGATCTATGACTTCTCAAAGCCGGGTCATGAAT...CGTTACAGCCCTGCATTTGAGATAAGTTGCCTTGATTCTGACATTTGGCCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476521.5
CDS-3UTR CAA 90 bp CATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATCCAACCATCAAAATATaGGAAATAGGAATGCCTAGC +
Preference number: 5 (lower is better)
Translates to: HCGTPVQAGPNVRIKATYPTIKI*EIGMPS
Trigger: GCTAGGCATTCCTATTTCCAATATTTTGATGGTTGG...ATAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR CAA 90 bp TCAATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCCCAACCATCAAAATATaGGAAATAGGAATGCCTAGC +
Preference number: 5 (lower is better)
Translates to: SIEIDSHCGTPVQAGPNVPTIKI*EIGMPS
Trigger: GCTAGGCATTCCTATTTCCAATATTTTGATGGTTGG...GACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR CAA 90 bp ATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGATTTTGGCCTTTGAACTaGAGATATGACTGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: IEIDSHCGTPVQAGPNVRFWPLN*RYDCSK
Trigger: CTTGGAACAGTCATATCTCAAGTTCAAAGGCCAAAA...TCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp TCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATTTTGGCCTTTGAACTaGAGATATGACTGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: SLRHTSTGWAKCQNQGNLFWPLN*RYDCSK
Trigger: CTTGGAACAGTCATATCTCAAGTTCAAAGGCCAAAA...TAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp ATAGAGATTGACTCTCATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGACATCAGAGAAAGATTTaGCAAGGGTGTACAATTGGT +
Preference number: 5 (lower is better)
Translates to: IEIDSHCGTPVQAGPNVRHQRKI*QGCTIG
Trigger: ACCAATTGTACACCCTTGCAAAATCTTTCTCTGATG...TCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATGAGAGTCAATCTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS TCA 90 bp AAGTGGGAGCTAAGCTATGAGTACACAAAGGCATACAGACTGATATaGTGGACTTTAGAGACTCAGAAAGGAGAGGATGGAAGAGGAGCT +
Preference number: 5 (lower is better)
Translates to: KWELSYEYTKAYRLI*WTLETQKGEDGRGA
Trigger: AGCTCCTCTTCCATCCTCTCCTTTCTGAGTCTCTAAAGTCCATCATATCAGTCTGTATGCCTTTGTGTACTCATAGCTTAGCTCCCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486882.5
CDS GCA 90 bp GTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATCTCAAATaGAGGGCTGTAACGCTCTCTCAATTGCACCTGAAAATGAAACAA +
Preference number: 5 (lower is better)
Translates to: VQAGPNVRIKATYLK*RAVTLSQLHLKMKQ
Trigger: TTGTTTCATTTTCAGGTGCAATTGAGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494910.2
CDS-3UTR CAA 90 bp CATTGCGGCACACCAGTACAGGCTGGGCCAAATGTCAGAATCAAGGCAACTTATTACTTCTTTGTGAACTaGCTTCACTTTTGCCAACAT +
Preference number: 5 (lower is better)
Translates to: HCGTPVQAGPNVRIKATYYFFVN*LHFCQH
Trigger: ATGTTGGCAAAAGTGAAGCAAGTTCACAAAGAAGTA...ATAAGTTGCCTTGATTCTGACATTTGGCCCAGCCTGTACTGGTGTGCCGCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000476521.5
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp AGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATATTCATGACCCGGCTTaGAGAAGTCATAGATCTACT +
Preference number: 5 (lower is better)
Translates to: RTYLSPPLLRFWPLNLRYIHDPA*RSHRST
Trigger: AGTAGATCTATGACTTCTCAAAGCCGGGTCATGAAT...ATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR CAA 90 bp ATGGTGAACCTTCAATCACCTTCAGTCTCCCAACCAACAATGGTCATGGCTTGTATCATGCCCTACTTTTaGGACCTGTTGCTTCTACAT +
Preference number: 5 (lower is better)
Translates to: MVNLQSPSVSQPTMVMACIMPYF*DLLLLH
Trigger: ATGTAGAAGCAACAGGTCCAAAAAGTAGGGCATGAT...ACAAGCCATGACCATTGTTGGTTGGGAGACTGAAGGTGATTGAAGGTTCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp GCAATTTTGCCTACACTGCACTTCCTGTCCTGGAGCCTGAAACAGTCTGAGTCTCCAGAGAATAAGAAGTaGTGGTATCATTTTGCCAAT +
Preference number: 5 (lower is better)
Translates to: AILPTLHFLSWSLKQSESPENKK*WYHFAN
Trigger: ATTGGCAAAATGATACCACAACTTCTTATTCTCTGG...AGACTCAGACTGTTTCAGGCTCCAGGACAGGAAGTGCAGTGTAGGCAAAATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp TGCAGTAGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAAGAATTTAGTGTCTTaGACTGAGCTGTACATCTTG +
Preference number: 5 (lower is better)
Translates to: CSRTYLSPPLLRFWPLNLKNLVS*TELYIL
Trigger: CAAGATGTACAGCTCAGTCAAAGACACTAAATTCTT...CAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCTACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTAAATTCCCATGGCTTTaGGTTGCAGGATTCCATGAC +
Preference number: 5 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCKFPWL*VAGFHD
Trigger: GTCATGGAATCCTGCAACCAAAAGCCATGGGAATTT...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp TGTAAATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCGTTCCAAATCCGGCTTaGAGAAGTCATAGATCTACT +
Preference number: 5 (lower is better)
Translates to: CKWYGNMEGWFAVGPILAVPNPA*RSHRST
Trigger: AGTAGATCTATGACTTCTCAAAGCCGGATTTGGAAC...GGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCATTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681501.1
CDS GCA 90 bp ATCTCTCTCTCTCCACATCCCCATCTCCTTTGTCATCTCTATCTCTaGACATATATTTCTCAACTTGCTTTGCTCAAAGCAGCCTATACG +
Preference number: 5 (lower is better)
Translates to: ISLSPHPHLLCHLYL*TYISQLALLKAAYT
Trigger: CGTATAGGCTGCTTTGAGCAAAGCAAGTTGAGAAATATATGTGCAGAGATAGAGATGACAAAGGAGATGGGGATGTGGAGAGAGAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476876.6
ENST00000486882.5
CDS-3UTR CAA 90 bp TGTAAATGGTACGGAAATATGGAGGGGTGGTTTGCAGTAGGACCTATCTTAGCCTTTTGGCCTTTGAACTaGAGATATGACTGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: CKWYGNMEGWFAVGPILAFWPLN*RYDCSK
Trigger: CTTGGAACAGTCATATCTCAAGTTCAAAGGCCAAAA...GGCTAAGATAGGTCCTACTGCAAACCACCCCTCCATATTTCCGTACCATTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp AGGACCTATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATACTGAGCTGTACATCTaGCTTAACCGTAAAGAATGT +
Preference number: 5 (lower is better)
Translates to: RTYLSPPLLRFWPLNLRYTELYI*LNRKEC
Trigger: ACATTCTTTACGGTTAAGCAAGATGTACAGCTCAGT...ATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATAGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp TATCTTAGCCCACCGCTTCTCAGGTTTTGGCCTTTGAACTTGAGATATGACTGTAATGACTTTAAACAATaGCCCCCAGCTATGGTTGTG +
Preference number: 5 (lower is better)
Translates to: YLSPPLLRFWPLNLRYDCNDFKQ*PPAMVV
Trigger: CACAACCATAGCTGGGGGCAATTGTTTAAAGTCATT...ACAGTCATATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGTGGGCTAAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS GCA 90 bp CAGAGTTGGCAACATGAGAGGAAGAGGAGGAAAAATTATCCTCTCTaGACATTAACTTGCTCTGGAAGCTCTCACATAATTACACCTAGA +
Preference number: 5 (lower is better)
Translates to: QSWQHERKRRKNYPL*TLTCSGSSHIITPR
Trigger: TCTAGGTGTAATTATGTGAGAGCTTCCAGAGCAAGTTAATGTGCAGAGAGGATAATTTTTCCTCCTCTTCCTCTCATGTTGCCAACTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476876.6
ENST00000486882.5
CDS-3UTR CAA 90 bp AAGATGTCACAGAAACTGAATTGTAAATGGTACGGAAATATGGAGGGGTGGTTTTGGGGTTTCATCATGTaGCCCAGGCTAGTTTTCCTT +
Preference number: 5 (lower is better)
Translates to: KMSQKLNCKWYGNMEGWFWGFIM*PRLVFL
Trigger: AAGGAAAACTAGCCTGGGCAACATGATGAAACCCCA...AAACCACCCCTCCATATTTCCGTACCATTTACAATTCAGTTTCTGTGACATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000680110.1
CDS-3UTR CAA 90 bp CCTTTAAGCCAATTCCCTGTAGCTACTTACAGCATGACTGTTAGCTCCTTTCCTTGCAAGGGTGTACAATaGGTATGCAAGTTTTTATCC +
Preference number: 5 (lower is better)
Translates to: PLSQFPVATYSMTVSSFPCKGVQ*VCKFLS
Trigger: GGATAAAAACTTGCATACCAATTGTACACCCTTGCA...AGGAAAGGAGCTAACAGTCATGCTGTAAGTAGCTACAGGGAATTGGCTTAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS GCA 90 bp CATGAGAGGAAGAGGAGGAAAAATTATCCTCTCTGCACATTAACTTaGTCTGGAAGCTCTCACATAATTACACCTAGAAGTTCTAAGGGT +
Preference number: 5 (lower is better)
Translates to: HERKRRKNYPLCTLT*SGSSHIITPRSSKG
Trigger: ACCCTTAGAACTTCTAGGTGTAATTATGTGAGAGCTTCCAGAGCAAGTTAATGTGCAGAGAGGATAATTTTTCCTCCTCTTCCTCTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476876.6
ENST00000486882.5
CDS-3UTR CAA 90 bp TTCAGCACCTTACCTGCCTTTCTCTTAAAAATCCTAAACTTAGACTCAGCAGGGCATTCCATGTCAATCTaGTTGTCACTTCCATTGTTC +
Preference number: 5 (lower is better)
Translates to: FSTLPAFLLKILNLDSAGHSMSI*LSLPLF
Trigger: GAACAATGGAAGTGACAACAAGATTGACATGGAATG...CCCTGCTGAGTCTAAGTTTAGGATTTTTAAGAGAAAGGCAGGTAAGGTGCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp AAGATGTCACAGAAACTGAATTGTAAATGGTACGGAAATATGGAGGGGTGGTTTACCGCTTCTCAGGTTTaGGCCTTTGAACTTGAGATA +
Preference number: 5 (lower is better)
Translates to: KMSQKLNCKWYGNMEGWFTASQV*AFELEI
Trigger: TATCTCAAGTTCAAAGGCCAAAACCTGAGAAGCGGT...AAACCACCCCTCCATATTTCCGTACCATTTACAATTCAGTTTCTGTGACATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681501.1
ENST00000681613.1
CDS-3UTR CAA 90 bp AACCTCACTGCAATCATCCACTTTAGTAAGCAAGGCCACATATGCTATACCACATACTTCTTTGTGAACTaGCTTCACTTTTGCCAACAT +
Preference number: 5 (lower is better)
Translates to: NLTAIIHFSKQGHICYTTYFFVN*LHFCQH
Trigger: ATGTTGGCAAAAGTGAAGCAAGTTCACAAAGAAGTA...TGTGGTATAGCATATGTGGCCTTGCTTACTAAAGTGGATGATTGCAGTGAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476521.5
CDS-3UTR CAA 90 bp CATATGCTATACCACAGTTTAATACTTCTTTGTGAACTTGCTTCACTTTTGCCAGTAACGCTCTCTCAATaGCACCAGTTTCCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: HMLYHSLILLCELASLLPVTLSQ*HQFPQE
Trigger: CTCTTGAGGAAACTGGTGCAATTGAGAGAGCGTTAC...TGGCAAAAGTGAAGCAAGTTCACAAAGAAGTATTAAACTGTGGTATAGCATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476521.5
CDS TCA 90 bp TCTCACATAATTACACCTAGAAGTTCTAAGGGTCATATAAGGGTCTaGTCTTTGGGTCATATGTCAAAACAGAGCAGCTCTGATGATAAG +
Preference number: 5 (lower is better)
Translates to: SHIITPRSSKGHIRV*SLGHMSKQSSSDDK
Trigger: CTTATCATCAGAGCTGCTCTGTTTTGACATATGACCCAAAGATCAGACCCTTATATGACCCTTAGAACTTCTAGGTGTAATTATGTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476876.6
ENST00000486882.5
CDS-3UTR CAA 90 bp TACTTATGTCTCTCTGGGCCTGCATACCTCATAGAACTCAAACTGCTCTATTTTTACTTCTTTGTGAACTaGCTTCACTTTTGCCAACAT +
Preference number: 5 (lower is better)
Translates to: YLCLSGPAYLIELKLLYFYFFVN*LHFCQH
Trigger: ATGTTGGCAAAAGTGAAGCAAGTTCACAAAGAAGTA...AAAATAGAGCAGTTTGAGTTCTATGAGGTATGCAGGCCCAGAGAGACATAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp TCTCTACTGCAATACCTGCTGTTTTGGTATATTGGTGTGTTACTGTGCAATAAGCTGTTGCTTCTACATTaGTATGGTAACTGTGAAACC +
Preference number: 5 (lower is better)
Translates to: SLLQYLLFWYIGVLLCNKLLLLH*YGNCET
Trigger: GGTTTCACAGTTACCATACAAATGTAGAAGCAACAG...CTTATTGCACAGTAACACACCAATATACCAAAACAGCAGGTATTGCAGTAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp AGATGGTGGGTGAGTTTGCACAAAGCTACAAATTTCTGTCAGAAACAGTCACTTTACTTTTTGGACCTGTaGCTTCTACATTTGTATGGT +
Preference number: 5 (lower is better)
Translates to: RWWVSLHKATNFCQKQSLYFLDL*LLHLYG
Trigger: ACCATACAAATGTAGAAGCAACAGGTCCAAAAAGTA...AAGTGACTGTTTCTGACAGAAATTTGTAGCTTTGTGCAAACTCACCCACCATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp AAGATGTCACAGAAACTGAATTGTAAATGGTACGGAAATATGGAGGGGTGGTTTTCCATGTCAATCTTGTaGTCACTTCCATTGTTCTAT +
Preference number: 5 (lower is better)
Translates to: KMSQKLNCKWYGNMEGWFSMSIL*SLPLFY
Trigger: ATAGAACAATGGAAGTGACAACAAGATTGACATGGA...AAACCACCCCTCCATATTTCCGTACCATTTACAATTCAGTTTCTGTGACATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp ACGCTGTTTCTCAAAGAACTCACAATCTGTTTAAGAAGCAGATGTCTATACAATATTCATGACCCGGCTTaGAGAAGTCATAGATCTACT +
Preference number: 5 (lower is better)
Translates to: TLFLKELTICLRSRCLYNIHDPA*RSHRST
Trigger: AGTAGATCTATGACTTCTCAAAGCCGGGTCATGAAT...ATTGTATAGACATCTGCTTCTTAAACAGATTGTGAGTTCTTTGAGAAACAGCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370751.10
ENST00000459784.6
ENST00000679848.1
ENST00000679998.1
ENST00000680110.1
ENST00000680295.1
ENST00000681613.1
CDS-3UTR CAA 90 bp TCTCTACTGCAATACCTGCTGTTTTGGTATATTGGTGTGTTACTGTGCAATAAGTACCTTAGCATTAGATaGAGTTATGTTGCTAGGAGA +
Preference number: 5 (lower is better)
Translates to: SLLQYLLFWYIGVLLCNKYLSIR*SYVARR
Trigger: TCTCCTAGCAACATAACTCAATCTAATGCTAAGGTA...CTTATTGCACAGTAACACACCAATATACCAAAACAGCAGGTATTGCAGTAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370751.10
CDS-3UTR CAA 90 bp CATATGCTATACCACAGTTTAATACTTCTTTGTGAACTTGCTTCACTTTTGCCATTTTGGCCTTTGAACTaGAGATATGACTGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: HMLYHSLILLCELASLLPFWPLN*RYDCSK
Trigger: CTTGGAACAGTCATATCTCAAGTTCAAAGGCCAAAA...TGGCAAAAGTGAAGCAAGTTCACAAAGAAGTATTAAACTGTGGTATAGCATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476521.5
CDS GCA 90 bp TATCAAAGAGTATGGCATGAATCTAACTGTTCCTTTCACTTTCCTTaGTCTTGTAGATCAATTATTACCTACCGAACACAAGGATTAGAA +
Preference number: 5 (lower is better)
Translates to: YQRVWHESNCSFHFP*SCRSIITYRTQGLE
Trigger: TTCTAATCCTTGTGTTCGGTAGGTAATAATTGATCTACAAGAGCAAGGAAAGTGAAAGGAACAGTTAGATTCATGCCATACTCTTTGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476876.6
ENST00000486882.5
CDS GCA 72 bp AGACATGGAGTTTTCTTGCATAACCCAGGGCTGAGCTaGTCAGTTAGGAGTCAGAGTTGGCAACATGAGAGG +
Preference number: 6 (lower is better)
Translates to: RHGVFLHNPGLS*SVRSQSWQHER
Trigger: CCTCTCATGTTGCCAACTCTGACTCCTAACTGAGCAGCTCAGCCCTGGGTTATGCAAGAAAACTCCATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476876.6
ENST00000486882.5
CDS CCA 72 bp ATGGAGGCAGAGAGTAGCATGGTGGTTACCAGAGGTTaGGAAAGTCAGAGGAAGGAGATGATGAAAAGAGGT +
Preference number: 6 (lower is better)
Translates to: MEAESSMVVTRG*ESQRKEMMKRG
Trigger: ACCTCTTTTCATCATCTCCTTCCTCTGACTTTCCCAACCTCTGGTAACCACCATGCTACTCTCTGCCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679848.1
CDS GCA 72 bp GGGCCAAATGTCAGAATCAAGGCAACTTATCTCAAATaGAGGGCTGTAACGCTCTCTCAATTGCACCTGAAA +
Preference number: 6 (lower is better)
Translates to: GPNVRIKATYLK*RAVTLSQLHLK
Trigger: TTTCAGGTGCAATTGAGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGCCTTGATTCTGACATTTGGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494910.2
CDS TCA 72 bp AGACCCAACTGGACCCACCAAAAGAATACGAATTTCTaGAACCAAGTCTGCATAGGGCCTATAGTCTCTGAT +
Preference number: 6 (lower is better)
Translates to: RPNWTHQKNTNF*NQVCIGPIVSD
Trigger: ATCAGAGACTATAGGCCCTATGCAGACTTGGTTTCAGAAATTCGTATTCTTTTGGTGGGTCCAGTTGGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000370751.10
ENST00000450498.1
ENST00000459784.6
ENST00000462041.1
ENST00000474002.1
ENST00000476521.5
ENST00000476876.6
ENST00000486882.5
ENST00000679848.1
ENST00000679998.1
CDS CAA 90 bp TTAAATGTGGCCAAGTCTACTTTTGAAATAAGACATGGAGTTTTCTaGCATAACCCAGGGCTGAGCTGCTCAGTTAGGAGTCAGAGTTGG +
Preference number: 6 (lower is better)
Translates to: LNVAKSTFEIRHGVF*HNPGLSCSVRSQSW
Trigger: CCAACTCTGACTCCTAACTGAGCAGCTCAGCCCTGGGTTATGCAAGAAAACTCCATGTCTTATTTCAAAAGTAGACTTGGCCACATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476876.6
ENST00000486882.5
CDS CAA 72 bp AAAAATCATACTTTGGAGTGCAATAAGGAGAGCACCTaGGAAACCTTTCCCTTAGGCTACAGTTTGGGATTC +
Preference number: 6 (lower is better)
Translates to: KNHTLECNKEST*ETFPLGYSLGF
Trigger: GAATCCCAAACTGTAGCCTAAGGGAAAGGTTTCCAAGGTGCTCTCCTTATTGCACTCCAAAGTATGATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486882.5
CDS TCA 72 bp ATTACACCTAGAAGTTCTAAGGGTCATATAAGGGTCTaGTCTTTGGGTCATATGTCAAAACAGAGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: ITPRSSKGHIRV*SLGHMSKQSSS
Trigger: AGAGCTGCTCTGTTTTGACATATGACCCAAAGATCAGACCCTTATATGACCCTTAGAACTTCTAGGTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476876.6
ENST00000486882.5
CDS CCA 72 bp AGAGAAAACCAAAAACCATATGCTCTCACTTATAAGTaGGAGCTAAGCTATGAGTACACAAAGGCATACAGA +
Preference number: 6 (lower is better)
Translates to: RENQKPYALTYK*ELSYEYTKAYR
Trigger: TCTGTATGCCTTTGTGTACTCATAGCTTAGCTCCCACTTATAAGTGAGAGCATATGGTTTTTGGTTTTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486882.5
CDS CAA 72 bp CATCTCTATCTCTGCACATATATTTCTCAACTTGCTTaGCTCAAAGCAGCCTATACGTTCTGGATAAAAACC +
Preference number: 6 (lower is better)
Translates to: HLYLCTYISQLA*LKAAYTFWIKT
Trigger: GGTTTTTATCCAGAACGTATAGGCTGCTTTGAGCAAAGCAAGTTGAGAAATATATGTGCAGAGATAGAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476876.6
ENST00000486882.5
CDS CAA 90 bp ATCAAGGCAACTTATCTCAAATGCAGGGCTGTAACGCTCTCTCAATaGCACCTGAAAATGAAACAAACAAGAGTGGAAATGAAACATATA +
Preference number: 6 (lower is better)
Translates to: IKATYLKCRAVTLSQ*HLKMKQTRVEMKHI
Trigger: TATATGTTTCATTTCCACTCTTGTTTGTTTCATTTTCAGGTGCAATTGAGAGAGCGTTACAGCCCTGCATTTGAGATAAGTTGCCTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494910.2
CDS CCA 72 bp TTGGAGAAGTTAATAAAGAGAGATAAGCTAGGCATTTaGGAGCACATTTCTGACGTGTATCTGTCAAATTCA +
Preference number: 6 (lower is better)
Translates to: LEKLIKRDKLGI*EHISDVYLSNS
Trigger: TGAATTTGACAGATACACGTCAGAAATGTGCTCCCAAATGCCTAGCTTATCTCTCTTTATTAACTTCTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486882.5
CDS CAA 72 bp ATTATGAACTCCTGGAGGATAAGGATTGTGCTGTTATaGACTTATGTGTTTTCAGTAACTGGCTTAGAGTTT +
Preference number: 6 (lower is better)
Translates to: IMNSWRIRIVLL*TYVFSVTGLEF
Trigger: AAACTCTAAGCCAGTTACTGAAAACACATAAGTCAATAACAGCACAATCCTTATCCTCCAGGAGTTCATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494910.2
ENST00000679651.1
CDS CAA 72 bp ACAAGGCAGTTAAGACATATAGCTATTGGCAAAGATTaGGAGAAGTTAATAAAGAGAGATAAGCTAGGCATT +
Preference number: 6 (lower is better)
Translates to: TRQLRHIAIGKD*EKLIKRDKLGI
Trigger: AATGCCTAGCTTATCTCTCTTTATTAACTTCTCCAAATCTTTGCCAATAGCTATATGTCTTAACTGCCTTGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486882.5