Pregenerated sensors for ICOSLG (Homo sapiens)
Ensembl gene IDs: ENSG00000160223Ensembl transcript IDs: ENST00000407780.7, ENST00000643466.1
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGTGGGTGTGCAGGGCAGGGTCTCTGAGGGGAGACCTCAGACTGTaGACTTGCGGGTGGACGCTTCTCTCTGTCGGGGCCTCCCGTGTC | + |
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Preference number: 1 (lower is better) Translates to: RWVCRAGSLRGDLRL*TCGWTLLSVGASRV Trigger: GACACGGGAGGCCCCGACAGAGAGAAGCGTCCACCCGCAAGTCCACAGTCTGAGGTCTCCCCTCAGAGACCCTGCCCTGCACACCCACCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407780.7 |
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| 3UTR CCA 90 bp | GCGCGCAACTCCAGTAAACACATAGCGCGTGCTCCTCCCAAGGGCTaGCAGCCACTGCACATGTGGACAGCCCACCCCAAGGGAAGAATC | + |
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Preference number: 1 (lower is better) Translates to: ARNSSKHIARAPPKG*QPLHMWTAHPKGRI Trigger: GATTCTTCCCTTGGGGTGGGCTGTCCACATGTGCAGTGGCTGCCAGCCCTTGGGAGGAGCACGCGCTATGTGTTTACTGGAGTTGCGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR GCA 90 bp | ACCCCAAGTCGAAGGTCAAACCACACACCTGTCCTTCAAGTCACCTaGTTGGCCCCCTTCCAAGCGTCCTTTCCTTCCTTTCATTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: TPSRRSNHTPVLQVT*LAPFQASFPSFHSC Trigger: GCAGGAATGAAAGGAAGGAAAGGACGCTTGGAAGGGGGCCAAGCAGGTGACTTGAAGGACAGGTGTGTGGTTTGACCTTCGACTTGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR GCA 90 bp | CTTGGGAGGCTGAGGCAGAATTGCTTGAGTTCGGGAGGCAGATGTTaGAATGAGCAGAGATTGCACTCCAGCCTAGGTGACAGAGCGATA | + |
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Preference number: 1 (lower is better) Translates to: LGRLRQNCLSSGGRC*NEQRLHSSLGDRAI Trigger: TATCGCTCTGTCACCTAGGCTGGAGTGCAATCTCTGCTCATTGCAACATCTGCCTCCCGAACTCAAGCAATTCTGCCTCAGCCTCCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407780.7 |
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| 3UTR CCA 90 bp | CAAGTCGAAGGTCAAACCACACACCTGTCCTTCAAGTCACCTGCTTaGCCCCCTTCCAAGCGTCCTTTCCTTCCTTTCATTCCTGCTCTA | + |
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Preference number: 1 (lower is better) Translates to: QVEGQTTHLSFKSPA*PPSKRPFLPFIPAL Trigger: TAGAGCAGGAATGAAAGGAAGGAAAGGACGCTTGGAAGGGGGCCAAGCAGGTGACTTGAAGGACAGGTGTGTGGTTTGACCTTCGACTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR GCA 90 bp | AATAAATGTCACTCCTGCTCTAAAACTTGTCTCGGTCTCTTCTTCTaGCTTCTGCCCCTTGGTCGAATTCTTTCTTCTGAGGAGGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: NKCHSCSKTCLGLFF*LLPLGRILSSEEVR Trigger: TCTCACCTCCTCAGAAGAAAGAATTCGACCAAGGGGCAGAAGGCAGAAGAAGAGACCGAGACAAGTTTTAGAGCAGGAGTGACATTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR CAA 90 bp | GGTGTGCAGGGCAGGGTCTCTGAGGGGAGACCTCAGACTGTGGACTaGCGGGTGGACGCTTCTCTCTGTCGGGGCCTCCCGTGTCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: GVQGRVSEGRPQTVD*RVDASLCRGLPCPE Trigger: TTCTGGACACGGGAGGCCCCGACAGAGAGAAGCGTCCACCCGCAAGTCCACAGTCTGAGGTCTCCCCTCAGAGACCCTGCCCTGCACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407780.7 |
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| 3UTR CAA 90 bp | CCAAGTCGAAGGTCAAACCACACACCTGTCCTTCAAGTCACCTGCTaGGCCCCCTTCCAAGCGTCCTTTCCTTCCTTTCATTCCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: PSRRSNHTPVLQVTC*APFQASFPSFHSCS Trigger: AGAGCAGGAATGAAAGGAAGGAAAGGACGCTTGGAAGGGGGCCAAGCAGGTGACTTGAAGGACAGGTGTGTGGTTTGACCTTCGACTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR-3UTR TCA 90 bp | GTCGAAGGTCAAACCACACACCTGTCCTTCAAGTCACCTGCTTGGCCCCCTTCCTCGAATTCTTTCTTCTaGGGAGGTGAGAATTGCGGC | + |
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Preference number: 2 (lower is better) Translates to: VEGQTTHLSFKSPAWPPSSNSFF*GGENCG Trigger: GCCGCAATTCTCACCTCCTCAGAAGAAAGAATTCGA...GGAAGGGGGCCAAGCAGGTGACTTGAAGGACAGGTGTGTGGTTTGACCTTCGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR-3UTR CCA 90 bp | TGGTCACAGCCAACGCCAGGGAAAGGCAGCCTCCCAACAGACAGAAAAATCCTTAATTCTGGAGATGCCTaGTTCGTCCCAGGATCTGGC | + |
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Preference number: 2 (lower is better) Translates to: WSQPTPGKGSLPTDRKILNSGDA*FVPGSG Trigger: GCCAGATCCTGGGACGAACCAGGCATCTCCAGAATT...AAGGATTTTTCTGTCTGTTGGGAGGCTGCCTTTCCCTGGCGTTGGCTGTGACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR-3UTR TCA 90 bp | AATAATTGGTCACAGCCAACGCCAGGGAAAGGCAGCCTCCCAACAGACAGAAAATTTCTTCTGAGGAGGTaGGAATTGCGGCTGCCGCAG | + |
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Preference number: 2 (lower is better) Translates to: NNWSQPTPGKGSLPTDRKFLLRR*ELRLPQ Trigger: CTGCGGCAGCCGCAATTCTCACCTCCTCAGAAGAAA...TTTTCTGTCTGTTGGGAGGCTGCCTTTCCCTGGCGTTGGCTGTGACCAATTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR-3UTR GCA 90 bp | GTCGAAGGTCAAACCACACACCTGTCCTTCAAGTCACCTGCTTGGCCCCCTTCCTCTTCTTCTGCCTTCTaGCCCTTGGTCGAATTCTTT | + |
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Preference number: 2 (lower is better) Translates to: VEGQTTHLSFKSPAWPPSSSSAF*PLVEFF Trigger: AAAGAATTCGACCAAGGGGCAGAAGGCAGAAGAAGA...GGAAGGGGGCCAAGCAGGTGACTTGAAGGACAGGTGTGTGGTTTGACCTTCGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR-3UTR TCA 90 bp | AATAAATGTCACTCCTGCTCTAAAACTTGTCTCGGTCTCTTCTTCTGCCTTCTGCACAAACACATCTGGTaGAGGGGCTGCGCCATCGCG | + |
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Preference number: 2 (lower is better) Translates to: NKCHSCSKTCLGLFFCLLHKHIW*RGCAIA Trigger: CGCGATGGCGCAGCCCCTTCACCAGATGTGTTTGTG...CAGAAGGCAGAAGAAGAGACCGAGACAAGTTTTAGAGCAGGAGTGACATTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR-3UTR CCA 90 bp | GTCGCCCCCAGATTAGAAATCAATCACAGTCAATCTTGCAGTGAGTCTTTAGCCCTGGGGAAGGAATTCTaGAGATGCCTGGTTCGTCCC | + |
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Preference number: 2 (lower is better) Translates to: VAPRLEINHSQSCSESLALGKEF*RCLVRP Trigger: GGGACGAACCAGGCATCTCCAGAATTCCTTCCCCAG...GGCTAAAGACTCACTGCAAGATTGACTGTGATTGATTTCTAATCTGGGGGCGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR-3UTR GCA 90 bp | AGTGTTGGTCGGGTGGCTGTTAACTGTCTCTCTAAAATAATAATTGGTCACAGCCTCGGTCTCTTCTTCTaGCTTCTGCCCCTTGGTCGA | + |
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Preference number: 2 (lower is better) Translates to: SVGRVAVNCLSKIIIGHSLGLFF*LLPLGR Trigger: TCGACCAAGGGGCAGAAGGCAGAAGAAGAGACCGAG...GCTGTGACCAATTATTATTTTAGAGAGACAGTTAACAGCCACCCGACCAACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR TCA 72 bp | GGGGCCTCCCGTGTCCAGAAGATGTTGAACAGCATCTaGGGCTTCCACCCGCTGAAGCCGAGGAACAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: GASRVQKMLNSI*GFHPLKPRNSP Trigger: GGGGCTGTTCCTCGGCTTCAGCGGGTGGAAGCCTCAGATGCTGTTCAACATCTTCTGGACACGGGAGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000407780.7 |
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| 3UTR CCA 72 bp | CGTGCTCCTCCCAAGGGCTGGCAGCCACTGCACATGTaGACAGCCCACCCCAAGGGAAGAATCAGGGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: RAPPKGWQPLHM*TAHPKGRIRGE Trigger: TTCTCCCCTGATTCTTCCCTTGGGGTGGGCTGTCCACATGTGCAGTGGCTGCCAGCCCTTGGGAGGAGCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR TCA 72 bp | CCTGGATCCAGCGCCTCACTTTACAGGAGGGGAAACTaGGGCACAAGCATGTGCTACCTGGCTCGGGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: PGSSASLYRRGN*GTSMCYLARGP Trigger: TGGCCCCCGAGCCAGGTAGCACATGCTTGTGCCTCAGTTTCCCCTCCTGTAAAGTGAGGCGCTGGATCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000407780.7 |
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| 3UTR CCA 72 bp | GGCCTCAAAGTAACCCGCCTGCTGGGGAAGGAATTCTaGAGATGCCTGGTTCGTCCCAGGATCTGGCCCCCA | + |
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Preference number: 3 (lower is better) Translates to: GLKVTRLLGKEF*RCLVRPRIWPP Trigger: TGGGGGCCAGATCCTGGGACGAACCAGGCATCTCCAGAATTCCTTCCCCAGCAGGCGGGTTACTTTGAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR CCA 72 bp | TCCAGTAAACACATAGCGCGTGCTCCTCCCAAGGGCTaGCAGCCACTGCACATGTGGACAGCCCACCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: SSKHIARAPPKG*QPLHMWTAHPK Trigger: CTTGGGGTGGGCTGTCCACATGTGCAGTGGCTGCCAGCCCTTGGGAGGAGCACGCGCTATGTGTTTACTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR CCA 72 bp | ACTCTTCAATTTGTAGAGGGACGTGTAGAGGGGGTCTaGAATGCAGGCGAGGCAGGGGCCAGGAGGTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: TLQFVEGRVEGV*NAGEAGARRCQ Trigger: CTGGCACCTCCTGGCCCCTGCCTCGCCTGCATTCCAGACCCCCTCTACACGTCCCTCTACAAATTGAAGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR CCA 72 bp | GGAGCGTCCAAGCTGCAGAGCCCAGTAGACAGAACCTaGATCCAGCGCCTCACTTTACAGGAGGGGAAACTG | + |
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Preference number: 3 (lower is better) Translates to: GASKLQSPVDRT*IQRLTLQEGKL Trigger: CAGTTTCCCCTCCTGTAAAGTGAGGCGCTGGATCCAGGTTCTGTCTACTGGGCTCTGCAGCTTGGACGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000407780.7 |
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| 3UTR GCA 72 bp | GGTGAGAATTGCGGCTGCCGCAGACCTGTACGGATTTaGCACCGATCACAGGTTTTGGTGCCGTGTCACTTG | + |
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Preference number: 3 (lower is better) Translates to: GENCGCRRPVRI*HRSQVLVPCHL Trigger: CAAGTGACACGGCACCAAAACCTGTGATCGGTGGCAAATCCGTACAGGTCTGCGGCAGCCGCAATTCTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR TCA 72 bp | CTTCTGCCTTCTGCCCCTTGGTCGAATTCTTTCTTCTaGGGAGGTGAGAATTGCGGCTGCCGCAGACCTGTA | + |
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Preference number: 3 (lower is better) Translates to: LLPSAPWSNSFF*GGENCGCRRPV Trigger: TACAGGTCTGCGGCAGCCGCAATTCTCACCTCCTCAGAAGAAAGAATTCGACCAAGGGGCAGAAGGCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR GCA 72 bp | CGAAGGTCAAACCACACACCTGTCCTTCAAGTCACCTaGTTGGCCCCCTTCCAAGCGTCCTTTCCTTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: RRSNHTPVLQVT*LAPFQASFPSF Trigger: AAAGGAAGGAAAGGACGCTTGGAAGGGGGCCAAGCAGGTGACTTGAAGGACAGGTGTGTGGTTTGACCTTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR GCA 72 bp | CTGAGGCAGAATTGCTTGAGTTCGGGAGGCAGATGTTaGAATGAGCAGAGATTGCACTCCAGCCTAGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: LRQNCLSSGGRC*NEQRLHSSLGD Trigger: GTCACCTAGGCTGGAGTGCAATCTCTGCTCATTGCAACATCTGCCTCCCGAACTCAAGCAATTCTGCCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407780.7 |
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| 3UTR GCA 72 bp | GTCGCCCCCAGATTAGAAATCAATCACAGTCAATCTTaGAGTGAGTCTTTAGCCAGGAGTAAGCTCTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: VAPRLEINHSQS*SESLARSKLWP Trigger: AGGCCAGAGCTTACTCCTGGCTAAAGACTCACTGCAAGATTGACTGTGATTGATTTCTAATCTGGGGGCGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR GCA 72 bp | CACTCCTGCTCTAAAACTTGTCTCGGTCTCTTCTTCTaGCTTCTGCCCCTTGGTCGAATTCTTTCTTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: HSCSKTCLGLFF*LLPLGRILSSE Trigger: CTCAGAAGAAAGAATTCGACCAAGGGGCAGAAGGCAGAAGAAGAGACCGAGACAAGTTTTAGAGCAGGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR GCA 72 bp | ATTCCTGCTCTAAAGCTTTTTAATAAATGTCACTCCTaGTCTAAAACTTGTCTCGGTCTCTTCTTCTGCCTT | + |
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Preference number: 3 (lower is better) Translates to: IPALKLFNKCHS*SKTCLGLFFCL Trigger: AAGGCAGAAGAAGAGACCGAGACAAGTTTTAGAGCAGGAGTGACATTTATTAAAAAGCTTTAGAGCAGGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR GCA 90 bp | GGGCTGGCAGCCACTGCACATGTGGACAGCCCACCCCAAGGGAAGAATCAGGGGAGGGCTGGCAGCCACTaGACATGTGGACAGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: GLAATAHVDSPPQGKNQGRAGSH*TCGQPT Trigger: GGTGGGCTGTCCACATGTGCAGTGGCTGCCAGCCCT...CCCCTGATTCTTCCCTTGGGGTGGGCTGTCCACATGTGCAGTGGCTGCCAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR CCA 90 bp | CTCCTCCCAAGGGCTGGCAGCCACTGCACATGTGGACAGCCCACCCCAAGGGAAGCTCCTCCCAAGGGCTaGCAGCCACTGCACATGTGG | + |
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Preference number: 4 (lower is better) Translates to: LLPRAGSHCTCGQPTPREAPPKG*QPLHMW Trigger: CCACATGTGCAGTGGCTGCCAGCCCTTGGGAGGAGC...TTCCCTTGGGGTGGGCTGTCCACATGTGCAGTGGCTGCCAGCCCTTGGGAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR TCA 90 bp | CGGCTGCCGCAGACCTGTACGGATTTGCCACCGATCACAGGTTTTGGTGCCGTGGCAGCTGGTCAGACATaGGCAGGGCAGGAGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: RLPQTCTDLPPITGFGAVAAGQT*AGQERA Trigger: GGCCCTCTCCTGCCCTGCTCATGTCTGACCAGCTGC...CACGGCACCAAAACCTGTGATCGGTGGCAAATCCGTACAGGTCTGCGGCAGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR CCA 90 bp | CTCCTCCCAAGGGCTGGCAGCCACTGCACATGTGGACAGCCCACCCCAAGGGAACAGCCACTGCACATGTaGACAGCCCACCCCAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: LLPRAGSHCTCGQPTPREQPLHM*TAHPKG Trigger: TCCCTTGGGGTGGGCTGTCCACATGTGCAGTGGCTG...TTCCCTTGGGGTGGGCTGTCCACATGTGCAGTGGCTGCCAGCCCTTGGGAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR TCA 90 bp | AACCCGCCTGCTGGGGAAGGAATTCTGGAGATGCCTGGTTCGTCCCAGGATCTGTTTCTTCTGAGGAGGTaGGAATTGCGGCTGCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: NPPAGEGILEMPGSSQDLFLLRR*ELRLPQ Trigger: CTGCGGCAGCCGCAATTCTCACCTCCTCAGAAGAAA...CAGATCCTGGGACGAACCAGGCATCTCCAGAATTCCTTCCCCAGCAGGCGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR CCA 90 bp | GGCTGCCGCAGACCTGTACGGATTTGCCACCGATCACAGGTTTTGGTGCCGTGTCTGGGGAAGGAATTCTaGAGATGCCTGGTTCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: GCRRPVRICHRSQVLVPCLGKEF*RCLVRP Trigger: GGGACGAACCAGGCATCTCCAGAATTCCTTCCCCAG...ACACGGCACCAAAACCTGTGATCGGTGGCAAATCCGTACAGGTCTGCGGCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR CCA 90 bp | AAGGGAAGAATCAGGGGAGAAGGCAGGCCAGACCCCGGAAGCGTGCCAACATATGTTCGTCCCAGGATCTaGCCCCCAAAGCTTCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: KGRIRGEGRPDPGSVPTYVRPRI*PPKLLG Trigger: TCCTAGAAGCTTTGGGGGCCAGATCCTGGGACGAAC...ATATGTTGGCACGCTTCCGGGGTCTGGCCTGCCTTCTCCCCTGATTCTTCCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR CCA 90 bp | ATTGCGGCTGCCGCAGACCTGTACGGATTTGCCACCGATCACAGGTTTTGGTGCTTCAAGTCACCTGCTTaGCCCCCTTCCAAGCGTCCT | + |
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Preference number: 4 (lower is better) Translates to: IAAAADLYGFATDHRFWCFKSPA*PPSKRP Trigger: AGGACGCTTGGAAGGGGGCCAAGCAGGTGACTTGAA...GCACCAAAACCTGTGATCGGTGGCAAATCCGTACAGGTCTGCGGCAGCCGCAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR TCA 90 bp | ATTGCGGCTGCCGCAGACCTGTACGGATTTGCCACCGATCACAGGTTTTGGTGCCATGTCTTGAGACAGTaGGCTCTGTCTCCGGACTCA | + |
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Preference number: 4 (lower is better) Translates to: IAAAADLYGFATDHRFWCHVLRQ*ALSPDS Trigger: TGAGTCCGGAGACAGAGCTCACTGTCTCAAGACATG...GCACCAAAACCTGTGATCGGTGGCAAATCCGTACAGGTCTGCGGCAGCCGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR GCA 90 bp | AAAACCCCAAGTCGAAGGTCAAACCACACACCTGTCCTTCAAGTCACCTGCTTGGCAGGGGCCAGGAGGTaGCAGGTGACCTGCTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: KTPSRRSNHTPVLQVTCLAGARR*QVTCSD Trigger: ATCAGAGCAGGTCACCTGGCACCTCCTGGCCCCTGC...CAAGCAGGTGACTTGAAGGACAGGTGTGTGGTTTGACCTTCGACTTGGGGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR CCA 90 bp | GTCGAAGGTCAAACCACACACCTGTCCTTCAAGTCACCTGCTTGGCCCCCTTCCAATTCTGGAGATGCCTaGTTCGTCCCAGGATCTGGC | + |
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Preference number: 4 (lower is better) Translates to: VEGQTTHLSFKSPAWPPSNSGDA*FVPGSG Trigger: GCCAGATCCTGGGACGAACCAGGCATCTCCAGAATT...GGAAGGGGGCCAAGCAGGTGACTTGAAGGACAGGTGTGTGGTTTGACCTTCGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR CCA 90 bp | GTCGAAGGTCAAACCACACACCTGTCCTTCAAGTCACCTGCTTGGCCCCCTTCCGTTACAGTAGGCAGCTaGTCAGACATGAGCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: VEGQTTHLSFKSPAWPPSVTVGS*SDMSRA Trigger: TGCCCTGCTCATGTCTGACCAGCTGCCTACTGTAAC...GGAAGGGGGCCAAGCAGGTGACTTGAAGGACAGGTGTGTGGTTTGACCTTCGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR GCA 90 bp | GGTCAAACCACACACCTGTCCTTCAAGTCACCTGCTTGGCCCCCTTCCAAGCGTAGTAGGCTCACAGCTTaGTCCCAGGCTGGATTTCAA | + |
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Preference number: 4 (lower is better) Translates to: GQTTHLSFKSPAWPPSKRSRLTA*SQAGFQ Trigger: TTGAAATCCAGCCTGGGAGCAAGCTGTGAGCCTACT...ACGCTTGGAAGGGGGCCAAGCAGGTGACTTGAAGGACAGGTGTGTGGTTTGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR TCA 90 bp | AAGGTCAAACCACACACCTGTCCTTCAAGTCACCTGCTTGGCCCCCTTCCAAGCCTCAAAGCCATGTCTTaGGACAGTGAGCTCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: KVKPHTCPSSHLLGPLPSLKAMS*DSELCL Trigger: GAGACAGAGCTCACTGTCTCAAGACATGGCTTTGAG...GCTTGGAAGGGGGCCAAGCAGGTGACTTGAAGGACAGGTGTGTGGTTTGACCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR GCA 90 bp | GGCTGCCGCAGACCTGTACGGATTTGCCACCGATCACAGGTTTTGGTGCCGTGTTCTTCTTCTGCCTTCTaGCCCTTGGTCGAATTCTTT | + |
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Preference number: 4 (lower is better) Translates to: GCRRPVRICHRSQVLVPCSSSAF*PLVEFF Trigger: AAAGAATTCGACCAAGGGGCAGAAGGCAGAAGAAGA...ACACGGCACCAAAACCTGTGATCGGTGGCAAATCCGTACAGGTCTGCGGCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR CCA 90 bp | GGTCAAACCACACACCTGTCCTTCAAGTCACCTGCTTGGCCCCCTTCCAAGCGTCAGGCATTGGGTGAGTaGGCTCAAGCATGTGTATTA | + |
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Preference number: 4 (lower is better) Translates to: GQTTHLSFKSPAWPPSKRQALGE*AQACVL Trigger: TAATACACATGCTTGAGCCCACTCACCCAATGCCTG...ACGCTTGGAAGGGGGCCAAGCAGGTGACTTGAAGGACAGGTGTGTGGTTTGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| 3UTR CAA 72 bp | AGGTCAAACCACACACCTGTCCTTCAAGTCACCTGCTaGGCCCCCTTCCAAGCGTCCTTTCCTTCCTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: RSNHTPVLQVTC*APFQASFPSFH Trigger: ATGAAAGGAAGGAAAGGACGCTTGGAAGGGGGCCAAGCAGGTGACTTGAAGGACAGGTGTGTGGTTTGACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR TCA 90 bp | CAGGCGACCATCAGTGTTGGTCGGGTGGCTGTTAACTGTCTCTCTAAAATAATACACAAACACATCTGGTaGAGGGGCTGCGCCATCGCG | + |
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Preference number: 4 (lower is better) Translates to: QATISVGRVAVNCLSKIIHKHIW*RGCAIA Trigger: CGCGATGGCGCAGCCCCTTCACCAGATGTGTTTGTG...TATTATTTTAGAGAGACAGTTAACAGCCACCCGACCAACACTGATGGTCGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR TCA 90 bp | GTCGCCCCCAGATTAGAAATCAATCACAGTCAATCTTGCAGTGAGTCTTTAGCCCCAGGAGGTGCCAGGTaGCCTGCTCTGATGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VAPRLEINHSQSCSESLAPGGAR*PALMAS Trigger: AGAAGCCATCAGAGCAGGTCACCTGGCACCTCCTGG...GGCTAAAGACTCACTGCAAGATTGACTGTGATTGATTTCTAATCTGGGGGCGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR GCA 90 bp | AGTGTTGGTCGGGTGGCTGTTAACTGTCTCTCTAAAATAATAATTGGTCACAGCCCAGATAAACAAATGTaGACAGGGCCCGGGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SVGRVAVNCLSKIIIGHSPDKQM*TGPGSC Trigger: GCAGCTCCCGGGCCCTGTGCACATTTGTTTATCTGG...GCTGTGACCAATTATTATTTTAGAGAGACAGTTAACAGCCACCCGACCAACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR GCA 90 bp | AATAAATGTCACTCCTGCTCTAAAACTTGTCTCGGTCTCTTCTTCTGCCTTCTGCTCGGTCTCTTCTTCTaGCTTCTGCCCCTTGGTCGA | + |
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Preference number: 4 (lower is better) Translates to: NKCHSCSKTCLGLFFCLLLGLFF*LLPLGR Trigger: TCGACCAAGGGGCAGAAGGCAGAAGAAGAGACCGAG...CAGAAGGCAGAAGAAGAGACCGAGACAAGTTTTAGAGCAGGAGTGACATTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR TCA 90 bp | CAGGCGACCATCAGTGTTGGTCGGGTGGCTGTTAACTGTCTCTCTAAAATAATATCGAATTCTTTCTTCTaGGGAGGTGAGAATTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: QATISVGRVAVNCLSKIISNSFF*GGENCG Trigger: GCCGCAATTCTCACCTCCTCAGAAGAAAGAATTCGA...TATTATTTTAGAGAGACAGTTAACAGCCACCCGACCAACACTGATGGTCGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR TCA 90 bp | AGTCAATCTTGCAGTGAGTCTTTAGCCAGGAGTAAGCTCTGGCCTCAAAGTAACTCTGATGGCTTCTCTTaGGTTATTGTTCCATCTGTT | + |
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Preference number: 4 (lower is better) Translates to: SQSCSESLARSKLWPQSNSDGFS*VIVPSV Trigger: AACAGATGGAACAATAACTCAAGAGAAGCCATCAGA...GTTACTTTGAGGCCAGAGCTTACTCCTGGCTAAAGACTCACTGCAAGATTGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR GCA 90 bp | CAGGCGACCATCAGTGTTGGTCGGGTGGCTGTTAACTGTCTCTCTAAAATAATAAATAAATGTCACTCCTaGTCTAAAACTTGTCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: QATISVGRVAVNCLSKIINKCHS*SKTCLG Trigger: ACCGAGACAAGTTTTAGAGCAGGAGTGACATTTATT...TATTATTTTAGAGAGACAGTTAACAGCCACCCGACCAACACTGATGGTCGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS CCA 90 bp | GTAAGCTCTGGCCTCAAAGTAACCCGCCTGCTGGGGAAGGAATTCTaGAGATGCCTGGTTCGTCCCAGGATCTGGCCCCCAAAGCTTCTA | + |
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Preference number: 5 (lower is better) Translates to: VSSGLKVTRLLGKEF*RCLVRPRIWPPKLL Trigger: TAGAAGCTTTGGGGGCCAGATCCTGGGACGAACCAGGCATCTCCAGAATTCCTTCCCCAGCAGGCGGGTTACTTTGAGGCCAGAGCTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS GCA 90 bp | GCTCCCAGGCTGGATTTCAAGATGAAAGGAAGCACATCTGTAGTTTaGTCAAAGCCATGTCTTGAGACAGTGAGCTCTGTCTCCGGACTC | + |
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Preference number: 5 (lower is better) Translates to: APRLDFKMKGSTSVV*SKPCLETVSSVSGL Trigger: GAGTCCGGAGACAGAGCTCACTGTCTCAAGACATGGCTTTGAGCAAACTACAGATGTGCTTCCTTTCATCTTGAAATCCAGCCTGGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS-3UTR CAA 90 bp | CAGGCGACCATCAGTGTTGGTCGGGTGGCTGTTAACTGTCTCTCTAAAATAATAATAAGACCTCAGGCATaGGGTGAGTGGGCTCAAGCA | + |
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Preference number: 5 (lower is better) Translates to: QATISVGRVAVNCLSKIIIRPQA*GEWAQA Trigger: TGCTTGAGCCCACTCACCCAATGCCTGAGGTCTTAT...TATTATTTTAGAGAGACAGTTAACAGCCACCCGACCAACACTGATGGTCGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS CCA 72 bp | GATAAACAAATGTGCACAGGGCCCGGGAGCTGCAGGTaGGAGAGGGAAGGCAGTAGGCTCACAGCTTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: DKQMCTGPGSCR*EREGSRLTACS Trigger: GGAGCAAGCTGTGAGCCTACTGCCTTCCCTCTCCCACCTGCAGCTCCCGGGCCCTGTGCACATTTGTTTATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS GCA 72 bp | CATCCAGATAAACAAATGTGCACAGGGCCCGGGAGCTaGAGGTGGGAGAGGGAAGGCAGTAGGCTCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: HPDKQMCTGPGS*RWEREGSRLTA Trigger: AGCTGTGAGCCTACTGCCTTCCCTCTCCCACCTGCAGCTCCCGGGCCCTGTGCACATTTGTTTATCTGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS GCA 72 bp | TGGTGTGCACTCAGCAAGCATCCAGATAAACAAATGTaGACAGGGCCCGGGAGCTGCAGGTGGGAGAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: WCALSKHPDKQM*TGPGSCRWERE Trigger: TTCCCTCTCCCACCTGCAGCTCCCGGGCCCTGTGCACATTTGTTTATCTGGATGCTTGCTGAGTGCACACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS GCA 72 bp | TGCAGGTGGGAGAGGGAAGGCAGTAGGCTCACAGCTTaGTCCCAGGCTGGATTTCAAGATGAAAGGAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: CRWEREGSRLTA*SQAGFQDERKH Trigger: GTGCTTCCTTTCATCTTGAAATCCAGCCTGGGAGCAAGCTGTGAGCCTACTGCCTTCCCTCTCCCACCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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| CDS GCA 72 bp | CTGGATTTCAAGATGAAAGGAAGCACATCTGTAGTTTaGTCAAAGCCATGTCTTGAGACAGTGAGCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: LDFKMKGSTSVV*SKPCLETVSSV Trigger: GACAGAGCTCACTGTCTCAAGACATGGCTTTGAGCAAACTACAGATGTGCTTCCTTTCATCTTGAAATCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643466.1 |
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