RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IBTK (Homo sapiens)

Ensembl gene IDs: ENSG00000005700

Ensembl transcript IDs: ENST00000306270.12, ENST00000369751.2, ENST00000503400.5, ENST00000503631.5, ENST00000505222.5, ENST00000508381.1, ENST00000510291.5, ENST00000610980.4, ENST00000634402.1, ENST00000634585.1, ENST00000634695.1, ENST00000634741.1, ENST00000635314.1, ENST00000635384.1, ENST00000635425.1, ENST00000635454.2

Found 326 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTAAATATCTCCCCTTGTGGTAACACAGACTGTAGCTCCATCACTTaGAGCAACCAAAGACAGAGCAATGTCTTTATGGTGAAGGGCAGA +
Preference number: 1 (lower is better)
Translates to: VNISPCGNTDCSSIT*SNQRQSNVFMVKGR
Trigger: TCTGCCCTTCACCATAAAGACATTGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAGGGGAGATATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR GCA 90 bp GTGCAGGGAAGAGTCTATTGCCAACTTGAAATGTCACATCATGAATaGTGTCCATTTCATCTGCTTCCCTCAACAGTTTGCCAAACTCTT +
Preference number: 1 (lower is better)
Translates to: VQGRVYCQLEMSHHE*CPFHLLPSTVCQTL
Trigger: AAGAGTTTGGCAAACTGTTGAGGGAAGCAGATGAAATGGACAGCATTCATGATGTGACATTTCAAGTTGGCAATAGACTCTTCCCTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR GCA 90 bp AAAGTTGCATCCACTTGGATCTGTGCTGACACTAACAGCTCTATGTaGAAAGGTAAGTTTCTCAAGTCGAATTCTTTCATACACACTATT +
Preference number: 1 (lower is better)
Translates to: KVASTWICADTNSSM*KGKFLKSNSFIHTI
Trigger: AATAGTGTGTATGAAAGAATTCGACTTGAGAAACTTACCTTTGCACATAGAGCTGTTAGTGTCAGCACAGATCCAAGTGGATGCAACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR GCA 90 bp CAGAATGCACTGCCAAAATATATTTATGTGCAGGGAAGAGTCTATTaGCAACTTGAAATGTCACATCATGAATGCTGTCCATTTCATCTG +
Preference number: 1 (lower is better)
Translates to: QNALPKYIYVQGRVY*QLEMSHHECCPFHL
Trigger: CAGATGAAATGGACAGCATTCATGATGTGACATTTCAAGTTGGCAATAGACTCTTCCCTGCACATAAATATATTTTGGCAGTGCATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR CCA 90 bp TCCATCTTCTACTTCCAAATAGCTAATATCTGGTCCATCTTGATATaGTGTAATGACTCTTCTATCCATTGCTGGAATCATTTTCCGGTA +
Preference number: 1 (lower is better)
Translates to: SIFYFQIANIWSILI*CNDSSIHCWNHFPV
Trigger: TACCGGAAAATGATTCCAGCAATGGATAGAAGAGTCATTACACCATATCAAGATGGACCAGATATTAGCTATTTGGAAGTAGAAGATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR TCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCAGTCCATAGGACTGTATaGAACCTGCCTGCTGCAACG +
Preference number: 2 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAVHRTV*NLPAAT
Trigger: CGTTGCAGCAGGCAGGTTTCATACAGTCCTATGGAC...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR TCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCACTGCTGCAACGCCAATaGTTGTCCTTCCTTTCAGAT +
Preference number: 2 (lower is better)
Translates to: LVVTQTVAPSLAATKDRALLQRQ*LSFLSD
Trigger: ATCTGAAAGGAAGGACAATCATTGGCGTTGCAGCAG...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR TCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGGTCCATAGGACTGTATaGAACCTGCCTGCTGCAACG +
Preference number: 2 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLVHRTV*NLPAAT
Trigger: CGTTGCAGCAGGCAGGTTTCATACAGTCCTATGGAC...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR GCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCATGTATGAAACCTGCCTaGTGCAACGCCAATGATTGT +
Preference number: 2 (lower is better)
Translates to: LVVTQTVAPSLAATKDRACMKPA*CNANDC
Trigger: ACAATCATTGGCGTTGCAGCAGGCAGGTTTCATACA...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTAATGAAGACCTGACGTaGATAGGCCCATCGACACTG +
Preference number: 2 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSNEDLT*IGPSTL
Trigger: CAGTGTCGATGGGCCTATCCACGTCAGGTCTTCATT...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR TCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCAGTTAATACAACAGTATaGTCCTTAGCAGCTGCCACT +
Preference number: 2 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAVNTTV*SLAAAT
Trigger: AGTGGCAGCTGCTAAGGATCATACTGTTGTATTAAC...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR TCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTCTGCTGCAACGCCAATaGTTGTCCTTCCTTTCAGAT +
Preference number: 2 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSLLQRQ*LSFLSD
Trigger: ATCTGAAAGGAAGGACAATCATTGGCGTTGCAGCAG...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR TCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTCAGAGAACTGTTGACTaGTCTCCAGCAAAACACCCT +
Preference number: 2 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSQRTVD*SPAKHP
Trigger: AGGGTGTTTTGCTGGAGATCAGTCAACAGTTCTCTG...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR GCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTTGTAGCTCCATCACTTaGAGCAACCAAAGACAGAGC +
Preference number: 2 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSCSSIT*SNQRQS
Trigger: GCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACA...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR GCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGCAGGATTGCAAAGTTaGATCCACTTGGATCTGTGC +
Preference number: 2 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSAGLQS*IHLDLC
Trigger: GCACAGATCCAAGTGGATGCAACTTTGCAATCCTGC...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR GCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGGCAGGATTGCAAAGTTaGATCCACTTGGATCTGTGC +
Preference number: 2 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLAGLQS*IHLDLC
Trigger: GCACAGATCCAAGTGGATGCAACTTTGCAATCCTGC...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCACACACTTTTCTCCATTaGGATCTAGCAAACAACCCA +
Preference number: 2 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAHTFLH*DLANNP
Trigger: TGGGTTGTTTGCTAGATCCCAATGGAGAAAAGTGTG...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR GCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCATGAAACCTGCCTGCTaGAACGCCAATGATTGTCCT +
Preference number: 2 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPMKPAC*NANDCP
Trigger: AGGACAATCATTGGCGTTGCAGCAGGCAGGTTTCAT...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR GCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCTGTAGCTCCATCACTTaGAGCAACCAAAGACAGAGC +
Preference number: 2 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPCSSIT*SNQRQS
Trigger: GCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACA...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR TCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGCTTGTTTTAGGATCTaGCTGCAGGATTGCAAAGTT +
Preference number: 2 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSACFRI*LQDCKV
Trigger: AACTTTGCAATCCTGCAGTCAGATCCTAAAACAAGC...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGCACACTTTTCTCCATTaGGATCTAGCAAACAACCCA +
Preference number: 2 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLHTFLH*DLANNP
Trigger: TGGGTTGTTTGCTAGATCCCAATGGAGAAAAGTGTG...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTAAAGTTGCATCCACTTaGATCTGTGCTGACACTAAC +
Preference number: 2 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSKVAST*ICADTN
Trigger: GTTAGTGTCAGCACAGATCCAAGTGGATGCAACTTT...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGAAAGTTGCATCCACTTaGATCTGTGCTGACACTAAC +
Preference number: 2 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLKVAST*ICADTN
Trigger: GTTAGTGTCAGCACAGATCCAAGTGGATGCAACTTT...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAACCAGAGCTGCACAACTaGAAGCCTCAATCCATGAGC +
Preference number: 2 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQPELHN*KPQSMS
Trigger: GCTCATGGATTGAGGCTTCCAGTTGTGCAGCTCTGG...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR GCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGGAAATATGGCATTTGTaGAGGTCAAGCTTTGAAGAG +
Preference number: 2 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLEIWHL*RSSFEE
Trigger: CTCTTCAAAGCTTGACCTGCACAAATGCCATATTTC...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR GCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGTTTTAGGATCTGACTaGAGGATTGCAAAGTTGCAT +
Preference number: 2 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSVLGSD*RIAKLH
Trigger: ATGCAACTTTGCAATCCTGCAGTCAGATCCTAAAAC...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCTTGCCTGTATCTGTCTaGGTACATTACAACTGGAAG +
Preference number: 2 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPLPVSV*VHYNWK
Trigger: CTTCCAGTTGTAATGTACCCAGACAGATACAGGCAA...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR TCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAACGGGTTATGAGAAGTTaGTCAGCCACCACAAGAACA +
Preference number: 2 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQRVMRS*SATTRT
Trigger: TGTTCTTGTGGTGGCTGATCAACTTCTCATAACCCG...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR TCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAACTTTCAACCGGGTTATaGGAAGTTGATCAGCCACCA +
Preference number: 2 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQLSTGL*EVDQPP
Trigger: TGGTGGCTGATCAACTTCTCATAACCCGGTTGAAAG...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR GCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAATGAAACCTGCCTGCTaGAACGCCAATGATTGTCCT +
Preference number: 2 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQMKPAC*NANDCP
Trigger: AGGACAATCATTGGCGTTGCAGCAGGCAGGTTTCAT...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGCTGCTCAATGCAAAATaGAGAATATGTGGTCCAAAT +
Preference number: 2 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLLLNAK*RICGPN
Trigger: ATTTGGACCACATATTCTCCATTTTGCATTGAGCAG...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR TCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAACCTTGTATTCCATATaGCCCCCAGACACAAGAACT +
Preference number: 2 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQTLYSI*PPDTRT
Trigger: AGTTCTTGTGTCTGGGGGTCATATGGAATACAAGGT...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR TCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAGCTTCAGAGAACTGTTaGCTGATCTCCAGCAAAACA +
Preference number: 2 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQASENC*LISSKT
Trigger: TGTTTTGCTGGAGATCAGTCAACAGTTCTCTGAAGC...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR GCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAATGTATGAAACCTGCCTaGTGCAACGCCAATGATTGT +
Preference number: 2 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQCMKPA*CNANDC
Trigger: ACAATCATTGGCGTTGCAGCAGGCAGGTTTCATACA...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAATCTACCACAAAGAGATaGCACCCTGCAGAATCTTCA +
Preference number: 2 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQSTTKR*HPAESS
Trigger: TGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGA...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR TCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAGCTTGTTTTAGGATCTaGCTGCAGGATTGCAAAGTT +
Preference number: 2 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQACFRI*LQDCKV
Trigger: AACTTTGCAATCCTGCAGTCAGATCCTAAAACAAGC...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR TCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAATCAAACATGTCAGGATaGACCTTCTCTACCACAAAG +
Preference number: 2 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQSNMSG*TFSTTK
Trigger: CTTTGTGGTAGAGAAGGTTCATCCTGACATGTTTGA...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGAAATATGGCATTTGTaGAGGTCAAGCTTTGAAGAG +
Preference number: 2 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIEIWHL*RSSFEE
Trigger: CTCTTCAAAGCTTGACCTGCACAAATGCCATATTTC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
3UTR-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCATTATAGCAGTGAATTaGTTATGTGTCTCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIIIAVN*LCVSQA
Trigger: AGCCTGGGAGACACATAAGCAATTCACTGCTATAAT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
3UTR-3UTR CCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAATTGCCTGTATCTGTCTaGGTACATTACAACTGGAAG +
Preference number: 2 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQLPVSV*VHYNWK
Trigger: CTTCCAGTTGTAATGTACCCAGACAGATACAGGCAA...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAAGCAACAAGAATGGTaGCACAACTATTACACCAAA +
Preference number: 2 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIKQQEW*HNYYTK
Trigger: TTTGGTGTAATAGTTGTGTCACCATTCTTGTTGCTT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
3UTR-3UTR GCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAGAAATATGGCATTTGTaGAGGTCAAGCTTTGAAGAG +
Preference number: 2 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQEIWHL*RSSFEE
Trigger: CTCTTCAAAGCTTGACCTGCACAAATGCCATATTTC...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTACTCTACTGCTCAATaGAAAATGGAGAATATGTGG +
Preference number: 2 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIYSTAQ*KMENMW
Trigger: CCACATATTCTCCATTTTGCATTGAGCAGTAGAGTA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
3UTR-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCTGCTCAATGCAAAATaGAGAATATGTGGTCCAAAT +
Preference number: 2 (lower is better)
Translates to: LLGRVKPDILSQFPSFYILLNAK*RICGPN
Trigger: ATTTGGACCACATATTCTCCATTTTGCATTGAGCAG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
3UTR-3UTR TCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAAAGCAACAAGAATGGTaGCACAACTATTACACCAAA +
Preference number: 2 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQKQQEW*HNYYTK
Trigger: TTTGGTGTAATAGTTGTGTCACCATTCTTGTTGCTT...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR TCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAACTTGGTTTGAAGCCATaGGTTAAAAAGTCACAAGTA +
Preference number: 2 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQLGLKP*VKKSQV
Trigger: TACTTGTGACTTTTTAACTCATGGCTTCAAACCAAG...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCCAAACACAAAATTCTaGCCATTAATGAATCAGAAG +
Preference number: 2 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIPNTKF*PLMNQK
Trigger: CTTCTGATTCATTAATGGCCAGAATTTTGTGTTTGG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
3UTR-3UTR CCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAATATATCAGAATGTATTaGCATTTCCAGAGCTGCACA +
Preference number: 2 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQYIRMY*HFQSCT
Trigger: TGTGCAGCTCTGGAAATGCCAATACATTCTGATATA...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR CAA 90 bp GATATCTCCATCTTCTACTTCCAAATAGCTAATATCTGGTCCATCTaGATATGGTGTAATGACTCTTCTATCCATTGCTGGAATCATTTT +
Preference number: 2 (lower is better)
Translates to: DISIFYFQIANIWSI*IWCNDSSIHCWNHF
Trigger: AAAATGATTCCAGCAATGGATAGAAGAGTCATTACACCATATCAAGATGGACCAGATATTAGCTATTTGGAAGTAGAAGATGGAGATATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAATCAAATGCAGACTTCTaGTTATCATCTTCATGGAAA +
Preference number: 2 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQSNADF*LSSSWK
Trigger: TTTCCATGAAGATGATAACCAGAAGTCTGCATTTGA...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR GCA 72 bp TCCCCTTGTGGTAACACAGACTGTAGCTCCATCACTTaGAGCAACCAAAGACAGAGCAATGTCTTTATGGTG +
Preference number: 3 (lower is better)
Translates to: SPCGNTDCSSIT*SNQRQSNVFMV
Trigger: CACCATAAAGACATTGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CAA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGGATCTGACTGCAGGATaGCAAAGTTGCATCCACTTG +
Preference number: 3 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLDLTAG*QSCIHL
Trigger: CAAGTGGATGCAACTTTGCAATCCTGCAGTCAGATC...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR GCA 72 bp AGTAAGAAATCCCGGAATGACTTGGATGAAACTGAATaGAGAGAAGATGCCCATGCATTCACTGGTTTGGGG +
Preference number: 3 (lower is better)
Translates to: SKKSRNDLDETE*REDAHAFTGLG
Trigger: CCCCAAACCAGTGAATGCATGGGCATCTTCTCTGCATTCAGTTTCATCCAAGTCATTCCGGGATTTCTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CAA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTACACACTTTTCTCCATaGGGATCTAGCAAACAACCC +
Preference number: 3 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSTHFSP*GSSKQP
Trigger: GGGTTGTTTGCTAGATCCCAATGGAGAAAAGTGTGT...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CAA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTTGCTTCAGAGAACTGTaGACTGATCTCCAGCAAAAC +
Preference number: 3 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSCFREL*TDLQQN
Trigger: GTTTTGCTGGAGATCAGTCAACAGTTCTCTGAAGCA...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR TCA 72 bp CACAGCTGGAATTTCATAAAGGCTTGTTTTAGGATCTaGCTGCAGGATTGCAAAGTTGCATCCACTTGGATC +
Preference number: 3 (lower is better)
Translates to: HSWNFIKACFRI*LQDCKVASTWI
Trigger: GATCCAAGTGGATGCAACTTTGCAATCCTGCAGTCAGATCCTAAAACAAGCCTTTATGAAATTCCAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CAA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGAGTCTATTGCCAACTaGAAATGTCACATCATGAAT +
Preference number: 3 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSESIAN*KCHIMN
Trigger: ATTCATGATGTGACATTTCAAGTTGGCAATAGACTC...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAATTATAGCAGTGAATaGCTTATGTGTCTCCCAGGC +
Preference number: 3 (lower is better)
Translates to: LLGRVKPDILSQFPSFYINYSSE*LMCLPG
Trigger: GCCTGGGAGACACATAAGCAATTCACTGCTATAATT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
3UTR-3UTR CAA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAATGCTTCAGAGAACTGTaGACTGATCTCCAGCAAAAC +
Preference number: 3 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQCFREL*TDLQQN
Trigger: GTTTTGCTGGAGATCAGTCAACAGTTCTCTGAAGCA...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR GCA 72 bp TCCACTTGGATCTGTGCTGACACTAACAGCTCTATGTaGAAAGGTAAGTTTCTCAAGTCGAATTCTTTCATA +
Preference number: 3 (lower is better)
Translates to: STWICADTNSSM*KGKFLKSNSFI
Trigger: TATGAAAGAATTCGACTTGAGAAACTTACCTTTGCACATAGAGCTGTTAGTGTCAGCACAGATCCAAGTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR TCA 72 bp TTAATGCTACTTCACAAATCTCTTTCAACCGGGTTATaGGAAGTTGATCAGCCACCACAAGAACACTACAAA +
Preference number: 3 (lower is better)
Translates to: LMLLHKSLSTGL*EVDQPPQEHYK
Trigger: TTTGTAGTGTTCTTGTGGTGGCTGATCAACTTCTCATAACCCGGTTGAAAGAGATTTGTGAAGTAGCATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR GCA 72 bp CTGCCAAAATATATTTATGTGCAGGGAAGAGTCTATTaGCAACTTGAAATGTCACATCATGAATGCTGTCCA +
Preference number: 3 (lower is better)
Translates to: LPKYIYVQGRVY*QLEMSHHECCP
Trigger: TGGACAGCATTCATGATGTGACATTTCAAGTTGGCAATAGACTCTTCCCTGCACATAAATATATTTTGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CAA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAATTACAAGATTTAGGTTaGCTCTTCTGCCTCTCACTA +
Preference number: 3 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQLQDLG*LFCLSL
Trigger: TAGTGAGAGGCAGAAGAGCAAACCTAAATCTTGTAA...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CAA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAATATATCAGAATGTATaGGCATTTCCAGAGCTGCAC +
Preference number: 3 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQIYQNV*AFPELH
Trigger: GTGCAGCTCTGGAAATGCCAATACATTCTGATATAT...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR-3UTR CAA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAGTTTTGCACTATACATaGCTGCAAATTCCAGTAGCA +
Preference number: 3 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQVLHYT*LQIPVA
Trigger: TGCTACTGGAATTTGCAGCAATGTATAGTGCAAAAC...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR CCA 72 bp TACTTCCAAATAGCTAATATCTGGTCCATCTTGATATaGTGTAATGACTCTTCTATCCATTGCTGGAATCAT +
Preference number: 3 (lower is better)
Translates to: YFQIANIWSILI*CNDSSIHCWNH
Trigger: ATGATTCCAGCAATGGATAGAAGAGTCATTACACCATATCAAGATGGACCAGATATTAGCTATTTGGAAGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGATGAAACTGCGCCGGTaGATTCCGCAGGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLMKLRR*IPQGPH
Trigger: ATGTGGACCCTGCGGAATCCACCGGCGCAGTTTCAT...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCAAATATGGTTGCCTTCTaGTCCTGGGGTACCATGGGT +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRANMVAF*SWGTMG
Trigger: ACCCATGGTACCCCAGGACCAGAAGGCAACCATATT...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCAGCAGTCAGGCATGGGTaGACTCATCCTAACTGTTTT +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAAVRHG*THPNCF
Trigger: AAAACAGTTAGGATGAGTTCACCCATGCCTGACTGC...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCCAGGGATCGACACTTTaGTGTGCAGTCAGGCATGGG +
Preference number: 4 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPQGSTL*CAVRHG
Trigger: CCCATGCCTGACTGCACATCAAAGTGTCGATCCCTG...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCACGGGTTATGAGAAGTTaGTCAGCCACCACAAGAACA +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRARVMRS*SATTRT
Trigger: TGTTCTTGTGGTGGCTGATCAACTTCTCATAACCCG...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCAGCTTCCTTCAGAGTCTaGTGTCAACAGTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAASFRV*CQQFWK
Trigger: CTTCCAGAACTGTTGACATCAGACTCTGAAGGAAGC...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCAATGAAACCTGCCTGCTaGAACGCCAATGATTGTCCT +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAMKPAC*NANDCP
Trigger: AGGACAATCATTGGCGTTGCAGCAGGCAGGTTTCAT...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGCAGAGAAGATGCCCATaGATTCACTGGTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLQRRCP*IHWFGG
Trigger: GCCCCCAAACCAGTGAATGCATGGGCATCTTCTCTG...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCGTCCATAGGACTGTATaGAACCTGCCTGCTGCAACG +
Preference number: 4 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPVHRTV*NLPAAT
Trigger: CGTTGCAGCAGGCAGGTTTCATACAGTCCTATGGAC...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCAACCTTGTATTCCATATaGCCCCCAGACACAAGAACT +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRATLYSI*PPDTRT
Trigger: AGTTCTTGTGTCTGGGGGTCATATGGAATACAAGGT...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCAACCTCCAGAACTATCTaGACGTTTACGTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRATSRTI*TFTWLL
Trigger: AAGAAGCCACGTAAACGTTCAGATAGTTCTGGAGGT...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCAAGGACATCCAAAGCATaGTTCAGGGATCGACACTTT +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRARTSKA*FRDRHF
Trigger: AAAGTGTCGATCCCTGAAGCATGCTTTGGATGTCCT...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGAATGAAGACCTGACGTaGATAGGCCCATCGACACTG +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLNEDLT*IGPSTL
Trigger: CAGTGTCGATGGGCCTATCCACGTCAGGTCTTCATT...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCATCTACCACAAAGAGATaGCACCCTGCAGAATCTTCA +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRASTTKR*HPAESS
Trigger: TGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGA...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCCCAGAGCTGCACAACTaGAAGCCTCAATCCATGAGC +
Preference number: 4 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPPELHN*KPQSMS
Trigger: GCTCATGGATTGAGGCTTCCAGTTGTGCAGCTCTGG...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGAATATGGTTGCCTTCTaGTCCTGGGGTACCATGGGT +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLNMVAF*SWGTMG
Trigger: ACCCATGGTACCCCAGGACCAGAAGGCAACCATATT...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCAAAGATAGCCAGGGATTaGGACTGTCTAGAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAKIARD*DCLEVV
Trigger: TACCACTTCTAGACAGTCCCAATCCCTGGCTATCTT...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGGCAGTCAGGCATGGGTaGACTCATCCTAACTGTTTT +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLAVRHG*THPNCF
Trigger: AAAACAGTTAGGATGAGTTCACCCATGCCTGACTGC...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCAGGGATCGACACTTTaGTGTGCAGTCAGGCATGGG +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIQGSTL*CAVRHG
Trigger: CCCATGCCTGACTGCACATCAAAGTGTCGATCCCTG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCACTATTCTGGCTTCCATaGCCCAGGGTAAAATTTGTA +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRALFWLP*PRVKFV
Trigger: TACAAATTTTACCCTGGGTCATGGAAGCCAGAATAG...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTAAAGCACCACCTGCTTaGTATAAATCCCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSKAPPA*YKSHSW
Trigger: CCAGGAGTGGGATTTATATCAAGCAGGTGGTGCTTT...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCAACTTGGGAACAATTATaGCCATTCAGTCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRATWEQL*PFSPST
Trigger: TGTGGAAGGACTGAATGGTCATAATTGTTCCCAAGT...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGCAGAGAACTGTTGACTaGTCTCCAGCAAAACACCCT +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLQRTVD*SPAKHP
Trigger: AGGGTGTTTTGCTGGAGATCAGTCAACAGTTCTCTG...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCAGCTTGTTTTAGGATCTaGCTGCAGGATTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAACFRI*LQDCKV
Trigger: AACTTTGCAATCCTGCAGTCAGATCCTAAAACAAGC...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCATCAAACATGTCAGGATaGACCTTCTCTACCACAAAG +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRASNMSG*TFSTTK
Trigger: CTTTGTGGTAGAGAAGGTTCATCCTGACATGTTTGA...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGGGAAGCCTCAATCCATaGGCTACTCAGCATACTATG +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLGSLNP*ATQHTM
Trigger: CATAGTATGCTGAGTAGCTCATGGATTGAGGCTTCC...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGGAAGCCTCAATCCATaGGCTACTCAGCATACTATG +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSGSLNP*ATQHTM
Trigger: CATAGTATGCTGAGTAGCTCATGGATTGAGGCTTCC...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTCGGGTTATGAGAAGTTaGTCAGCCACCACAAGAACA +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSRVMRS*SATTRT
Trigger: TGTTCTTGTGGTGGCTGATCAACTTCTCATAACCCG...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTCTTTCAACCGGGTTATaGGAAGTTGATCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSLSTGL*EVDQPP
Trigger: TGGTGGCTGATCAACTTCTCATAACCCGGTTGAAAG...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGCTTCCTTCAGAGTCTaGTGTCAACAGTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSASFRV*CQQFWK
Trigger: CTTCCAGAACTGTTGACATCAGACTCTGAAGGAAGC...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAGTTCGGCAGGCGGCTaGAATACAGCCGCTACTACA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYISSAGG*NTAATT
Trigger: TGTAGTAGCGGCTGTATTGCAGCCGCCTGCCGAACT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCAAATGCTTCTGTGCAATaGTGTCCATCCAGACTCTTT +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRANASVQ*CPSRLF
Trigger: AAAGAGTCTGGATGGACAGCATTGCACAGAAGCATT...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTATGAAACCTGCCTGCTaGAACGCCAATGATTGTCCT +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSMKPAC*NANDCP
Trigger: AGGACAATCATTGGCGTTGCAGCAGGCAGGTTTCAT...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGTGTAGCTCCATCACTTaGAGCAACCAAAGACAGAGC +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLCSSIT*SNQRQS
Trigger: GCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACA...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTTGGCATTTCCAGAGCTaGACAACTGGAAGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSWHFQS*TTGSLN
Trigger: ATTGAGGCTTCCAGTTGTGCAGCTCTGGAAATGCCA...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCATGAAACTGCGCCGGTaGATTCCGCAGGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIMKLRR*IPQGPH
Trigger: ATGTGGACCCTGCGGAATCCACCGGCGCAGTTTCAT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
3UTR CAA 72 bp AGGCTTGTTTTAGGATCTGACTGCAGGATTGCAAAGTaGCATCCACTTGGATCTGTGCTGACACTAACAGCT +
Preference number: 4 (lower is better)
Translates to: RLVLGSDCRIAK*HPLGSVLTLTA
Trigger: AGCTGTTAGTGTCAGCACAGATCCAAGTGGATGCAACTTTGCAATCCTGCAGTCAGATCCTAAAACAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGGACAGAAACACGGAGTaGAATTTACAAAGCACCACC +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLDRNTE*NLQSTT
Trigger: GGTGGTGCTTTGTAAATTTCACTCCGTGTTTCTGTC...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGTCCATAGGACTGTATaGAACCTGCCTGCTGCAACG +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIVHRTV*NLPAAT
Trigger: CGTTGCAGCAGGCAGGTTTCATACAGTCCTATGGAC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTACCTTGTATTCCATATaGCCCCCAGACACAAGAACT +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSTLYSI*PPDTRT
Trigger: AGTTCTTGTGTCTGGGGGTCATATGGAATACAAGGT...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGCTTCAGAGAACTGTTaGCTGATCTCCAGCAAAACA +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSASENC*LISSKT
Trigger: TGTTTTGCTGGAGATCAGTCAACAGTTCTCTGAAGC...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCCTTTCAACCGGGTTATaGGAAGTTGATCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPLSTGL*EVDQPP
Trigger: TGGTGGCTGATCAACTTCTCATAACCCGGTTGAAAG...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTACCTCCAGAACTATCTaGACGTTTACGTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSTSRTI*TFTWLL
Trigger: AAGAAGCCACGTAAACGTTCAGATAGTTCTGGAGGT...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCACGCCTCAATCTTATCTaGATGAAATCCTGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRARLNLI*MKSCCE
Trigger: TTCACAACAGGATTTCATTCAGATAAGATTGAGGCG...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTAGGACATCCAAAGCATaGTTCAGGGATCGACACTTT +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSRTSKA*FRDRHF
Trigger: AAAGTGTCGATCCCTGAAGCATGCTTTGGATGTCCT...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTTGTATGAAACCTGCCTaGTGCAACGCCAATGATTGT +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSCMKPA*CNANDC
Trigger: ACAATCATTGGCGTTGCAGCAGGCAGGTTTCATACA...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCAGAGAAGATGCCCATaGATTCACTGGTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIQRRCP*IHWFGG
Trigger: GCCCCCAAACCAGTGAATGCATGGGCATCTTCTCTG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCACAAACTCTTCAGGGTTaGCAAATGCCTCATAGAAAA +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAQTLQG*QMPHRK
Trigger: TTTTCTATGAGGCATTTGGCAACCCTGAAGAGTTTG...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCAGAAATATGGCATTTGTaGAGGTCAAGCTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAEIWHL*RSSFEE
Trigger: CTCTTCAAAGCTTGACCTGCACAAATGCCATATTTC...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAATGAAACTGCGCCGGTaGATTCCGCAGGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQMKLRR*IPQGPH
Trigger: ATGTGGACCCTGCGGAATCCACCGGCGCAGTTTCAT...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGTCTACCACAAAGAGATaGCACCCTGCAGAATCTTCA +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLSTTKR*HPAESS
Trigger: TGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGA...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCCAGAGCTGCACAACTaGAAGCCTCAATCCATGAGC +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIPELHN*KPQSMS
Trigger: GCTCATGGATTGAGGCTTCCAGTTGTGCAGCTCTGG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGAAGATAGCCAGGGATTaGGACTGTCTAGAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLKIARD*DCLEVV
Trigger: TACCACTTCTAGACAGTCCCAATCCCTGGCTATCTT...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTCTATTCTGGCTTCCATaGCCCAGGGTAAAATTTGTA +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSLFWLP*PRVKFV
Trigger: TACAAATTTTACCCTGGGTCATGGAAGCCAGAATAG...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCTCCACCAACTCTGGATaGTGTTTGCTATTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPSTNSG*CLLFWL
Trigger: AAGCCAGAATAGCAAACATCATCCAGAGTTGGTGGA...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTACTTGGGAACAATTATaGCCATTCAGTCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSTWEQL*PFSPST
Trigger: TGTGGAAGGACTGAATGGTCATAATTGTTCCCAAGT...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGGTTAATACAACAGTATaGTCCTTAGCAGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLVNTTV*SLAAAT
Trigger: AGTGGCAGCTGCTAAGGATCATACTGTTGTATTAAC...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGTTAATACAACAGTATaGTCCTTAGCAGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSVNTTV*SLAAAT
Trigger: AGTGGCAGCTGCTAAGGATCATACTGTTGTATTAAC...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCATTAAATATCCATAATTaGAAGGGTGACCAGTCGCTA +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRALNIHN*KGDQSL
Trigger: TAGCGACTGGTCACCCTTGCAATTATGGATATTTAA...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTAATGCTTCTGTGCAATaGTGTCCATCCAGACTCTTT +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSNASVQ*CPSRLF
Trigger: AAAGAGTCTGGATGGACAGCATTGCACAGAAGCATT...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGATGATCCTTAGCAGCTaGCACTTGGGAACAATTATG +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLMILSS*HLGTIM
Trigger: CATAATTGTTCCCAAGTGGCAGCTGCTAAGGATCAT...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGAAAGAGATGGCACCCTaGAGAATCTTCATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLKEMAP*RIFIFL
Trigger: CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTT...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAACAGAGAAGATGCCCATaGATTCACTGGTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQQRRCP*IHWFGG
Trigger: GCCCCCAAACCAGTGAATGCATGGGCATCTTCTCTG...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTTTGGATGAAACTGAATaGAGAGAAGATGCCCATGCA +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSLDETE*REDAHA
Trigger: TGCATGGGCATCTTCTCTGCATTCAGTTTCATCCAA...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTCAGATCCACCAACTCTaGATGATGTTTGCTATTCTG +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSQIHQL*MMFAIL
Trigger: CAGAATAGCAAACATCATCCAGAGTTGGTGGATCTG...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTTATAAATCCCACTCCTaGAGAACAGATCCACCAACT +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSYKSHS*RTDPPT
Trigger: AGTTGGTGGATCTGTTCTCCAGGAGTGGGATTTATA...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTTTGCCTGTATCTGTCTaGGTACATTACAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSLPVSV*VHYNWK
Trigger: CTTCCAGTTGTAATGTACCCAGACAGATACAGGCAA...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAATGAAGACCTGACGTaGATAGGCCCATCGACACTG +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYINEDLT*IGPSTL
Trigger: CAGTGTCGATGGGCCTATCCACGTCAGGTCTTCATT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCATGGTCCATCTTGATATaGTGTAATGACTCTTCTATC +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAWSILI*CNDSSI
Trigger: GATAGAAGAGTCATTACACCATATCAAGATGGACCA...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAATATGGTTGCCTTCTaGTCCTGGGGTACCATGGGT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYINMVAF*SWGTMG
Trigger: ACCCATGGTACCCCAGGACCAGAAGGCAACCATATT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCACTGCTCAATGCAAAATaGAGAATATGTGGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRALLNAK*RICGPN
Trigger: ATTTGGACCACATATTCTCCATTTTGCATTGAGCAG...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGCAGTCAGGCATGGGTaGACTCATCCTAACTGTTTT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIAVRHG*THPNCF
Trigger: AAAACAGTTAGGATGAGTTCACCCATGCCTGACTGC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGTACAAGATCCAAAGCTaGCAAGCCTTCTTTATCTTG +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLYKIQS*QAFFIL
Trigger: CAAGATAAAGAAGGCTTGTCAGCTTTGGATCTTGTA...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAAAGCACCACCTGCTTaGTATAAATCCCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIKAPPA*YKSHSW
Trigger: CCAGGAGTGGGATTTATATCAAGCAGGTGGTGCTTT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCTGCTGCAACGCCAATaGTTGTCCTTCCTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYILLQRQ*LSFLSD
Trigger: ATCTGAAAGGAAGGACAATCATTGGCGTTGCAGCAG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCAGAGAACTGTTGACTaGTCTCCAGCAAAACACCCT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIQRTVD*SPAKHP
Trigger: AGGGTGTTTTGCTGGAGATCAGTCAACAGTTCTCTG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGGAAGCCTCAATCCATaGGCTACTCAGCATACTATG +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIGSLNP*ATQHTM
Trigger: CATAGTATGCTGAGTAGCTCATGGATTGAGGCTTCC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCGGGTTATGAGAAGTTaGTCAGCCACCACAAGAACA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIRVMRS*SATTRT
Trigger: TGTTCTTGTGGTGGCTGATCAACTTCTCATAACCCG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCTTTCAACCGGGTTATaGGAAGTTGATCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYILSTGL*EVDQPP
Trigger: TGGTGGCTGATCAACTTCTCATAACCCGGTTGAAAG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGCTTCCTTCAGAGTCTaGTGTCAACAGTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIASFRV*CQQFWK
Trigger: CTTCCAGAACTGTTGACATCAGACTCTGAAGGAAGC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCATCGACACTTTGATGTaGAGTCAGGCATGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIIDTLM*SQAWVN
Trigger: GTTCACCCATGCCTGACTGCACATCAAAGTGTCGAT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCATGAAACCTGCCTGCTaGAACGCCAATGATTGTCCT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIMKPAC*NANDCP
Trigger: AGGACAATCATTGGCGTTGCAGCAGGCAGGTTTCAT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTGTAGCTCCATCACTTaGAGCAACCAAAGACAGAGC +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYICSSIT*SNQRQS
Trigger: GCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGCAGGATTGCAAAGTTaGATCCACTTGGATCTGTGC +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIAGLQS*IHLDLC
Trigger: GCACAGATCCAAGTGGATGCAACTTTGCAATCCTGC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGCAGGGAAGAGTCTATTaGCAACTTGAAATGTCACAT +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLQGRVY*QLEMSH
Trigger: ATGTGACATTTCAAGTTGGCAATAGACTCTTCCCTG...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTCAGGGAAGAGTCTATTaGCAACTTGAAATGTCACAT +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSQGRVY*QLEMSH
Trigger: ATGTGACATTTCAAGTTGGCAATAGACTCTTCCCTG...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTGGCATTTCCAGAGCTaGACAACTGGAAGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIWHFQS*TTGSLN
Trigger: ATTGAGGCTTCCAGTTGTGCAGCTCTGGAAATGCCA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCACAGTTTCAACTGTTTTaGACTATACATTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAQFQLF*TIHCCK
Trigger: TTTGCAGCAATGTATAGTGCAAAACAGTTGAAACTG...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGAAATATGGCATTTGTaGAGGTCAAGCTTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSEIWHL*RSSFEE
Trigger: CTCTTCAAAGCTTGACCTGCACAAATGCCATATTTC...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCTATAAATCCCACTCCTaGAGAACAGATCCACCAACT +
Preference number: 4 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPYKSHS*RTDPPT
Trigger: AGTTGGTGGATCTGTTCTCCAGGAGTGGGATTTATA...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCATCTTCTATCCATTGCTaGAATCATTTTCCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: LVVTQTVAPSLAATKDRASSIHC*NHFPVK
Trigger: TTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCAATCCCGGAATGACTTaGATGAAACTGAATGCAGAG +
Preference number: 4 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPNPGMT*MKLNAE
Trigger: CTCTGCATTCAGTTTCATCCAAGTCATTCCGGGATT...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCAGATCCACTCCTTTCTaGATAAGCCAATCTAACACT +
Preference number: 4 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPRSTPF*ISQSNT
Trigger: AGTGTTAGATTGGCTTATTCAGAAAGGAGTGGATCT...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCTACAAGATCCAAAGCTaGCAAGCCTTCTTTATCTTG +
Preference number: 4 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPYKIQS*QAFFIL
Trigger: CAAGATAAAGAAGGCTTGTCAGCTTTGGATCTTGTA...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTCCACCAACTCTGGATaGTGTTTGCTATTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYISTNSG*CLLFWL
Trigger: AAGCCAGAATAGCAAACATCATCCAGAGTTGGTGGA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAAAAGCACCACCTGCTTaGTATAAATCCCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQKAPPA*YKSHSW
Trigger: CCAGGAGTGGGATTTATATCAAGCAGGTGGTGCTTT...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGACAGAAACACGGAGTaGAATTTACAAAGCACCACC +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIDRNTE*NLQSTT
Trigger: GGTGGTGCTTTGTAAATTTCACTCCGTGTTTCTGTC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAACTGCTGCAACGCCAATaGTTGTCCTTCCTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQLLQRQ*LSFLSD
Trigger: ATCTGAAAGGAAGGACAATCATTGGCGTTGCAGCAG...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCACCTTGTATTCCATATaGCCCCCAGACACAAGAACT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYITLYSI*PPDTRT
Trigger: AGTTCTTGTGTCTGGGGGTCATATGGAATACAAGGT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAACAGAGAACTGTTGACTaGTCTCCAGCAAAACACCCT +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQQRTVD*SPAKHP
Trigger: AGGGTGTTTTGCTGGAGATCAGTCAACAGTTCTCTG...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGCTTCAGAGAACTGTTaGCTGATCTCCAGCAAAACA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIASENC*LISSKT
Trigger: TGTTTTGCTGGAGATCAGTCAACAGTTCTCTGAAGC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGCTTGGTTTGAAGCCATaGGTTAAAAAGTCACAAGTA +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLLGLKP*VKKSQV
Trigger: TACTTGTGACTTTTTAACTCATGGCTTCAAACCAAG...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTATATCTGGTCCATCTTaGTATGGTGTAATGACTCTT +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSISGPS*YGVMTL
Trigger: AAGAGTCATTACACCATATCAAGATGGACCAGATAT...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCACCTCCAGAACTATCTaGACGTTTACGTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYITSRTI*TFTWLL
Trigger: AAGAAGCCACGTAAACGTTCAGATAGTTCTGGAGGT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTAATGAAATCCTGTTGTaGAATCAGGGGACTGTAAAT +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSNEILL*NQGTVN
Trigger: ATTTACAGTCCCCTGATTTCACAACAGGATTTCATT...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCCGCCTCAATCTTATCTaGATGAAATCCTGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPRLNLI*MKSCCE
Trigger: TTCACAACAGGATTTCATTCAGATAAGATTGAGGCG...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGAAGCAACAAGAATGGTaGCACAACTATTACACCAAA +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLKQQEW*HNYYTK
Trigger: TTTGGTGTAATAGTTGTGTCACCATTCTTGTTGCTT...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGTTAAATATCCATAATTaGAAGGGTGACCAGTCGCTA +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLLNIHN*KGDQSL
Trigger: TAGCGACTGGTCACCCTTGCAATTATGGATATTTAA...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAGGACATCCAAAGCATaGTTCAGGGATCGACACTTT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIRTSKA*FRDRHF
Trigger: AAAGTGTCGATCCCTGAAGCATGCTTTGGATGTCCT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTGTATGAAACCTGCCTaGTGCAACGCCAATGATTGT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYICMKPA*CNANDC
Trigger: ACAATCATTGGCGTTGCAGCAGGCAGGTTTCATACA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCGTTTTAGGATCTGACTaGAGGATTGCAAAGTTGCAT +
Preference number: 4 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPVLGSD*RIAKLH
Trigger: ATGCAACTTTGCAATCCTGCAGTCAGATCCTAAAAC...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCGACTCTTCTATCCATTaGTGGAATCATTTTCCGGTA +
Preference number: 4 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPDSSIH*WNHFPV
Trigger: TACCGGAAAATGATTCCAGCAATGGATAGAAGAGTC...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCCAAACTCTTCAGGGTTaGCAAATGCCTCATAGAAAA +
Preference number: 4 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPQTLQG*QMPHRK
Trigger: TTTTCTATGAGGCATTTGGCAACCCTGAAGAGTTTG...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTTACTCTACTGCTCAATaGAAAATGGAGAATATGTGG +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSYSTAQ*KMENMW
Trigger: CCACATATTCTCCATTTTGCATTGAGCAGTAGAGTA...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTCTACCACAAAGAGATaGCACCCTGCAGAATCTTCA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYISTTKR*HPAESS
Trigger: TGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306270.12
ENST00000635454.2
CDS-3UTR CCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTTATATCAGAATGTATTaGCATTTCCAGAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSYIRMY*HFQSCT
Trigger: TGTGCAGCTCTGGAAATGCCAATACATTCTGATATA...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTTGGTCCATCTTGATATaGTGTAATGACTCTTCTATC +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSWSILI*CNDSSI
Trigger: GATAGAAGAGTCATTACACCATATCAAGATGGACCA...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAAGATAGCCAGGGATTaGGACTGTCTAGAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIKIARD*DCLEVV
Trigger: TACCACTTCTAGACAGTCCCAATCCCTGGCTATCTT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTCCAATAAATCTTGTATaGCATGCTCCTCAATCTGAA +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSPINLV*HAPQSE
Trigger: TTCAGATTGAGGAGCATGCCATACAAGATTTATTGG...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCTATTCTGGCTTCCATaGCCCAGGGTAAAATTTGTA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYILFWLP*PRVKFV
Trigger: TACAAATTTTACCCTGGGTCATGGAAGCCAGAATAG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAATCCACCAACTCTGGATaGTGTTTGCTATTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQSTNSG*CLLFWL
Trigger: AAGCCAGAATAGCAAACATCATCCAGAGTTGGTGGA...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCACTTGGGAACAATTATaGCCATTCAGTCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYITWEQL*PFSPST
Trigger: TGTGGAAGGACTGAATGGTCATAATTGTTCCCAAGT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGTTAATACAACAGTATaGTCCTTAGCAGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIVNTTV*SLAAAT
Trigger: AGTGGCAGCTGCTAAGGATCATACTGTTGTATTAAC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGCTTGTTTTAGGATCTaGCTGCAGGATTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIACFRI*LQDCKV
Trigger: AACTTTGCAATCCTGCAGTCAGATCCTAAAACAAGC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306270.12
ENST00000635454.2
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTCAAACATGTCAGGATaGACCTTCTCTACCACAAAG +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYISNMSG*TFSTTK
Trigger: CTTTGTGGTAGAGAAGGTTCATCCTGACATGTTTGA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306270.12
ENST00000635454.2
CDS-3UTR TCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCAAGCAACAAGAATGGTaGCACAACTATTACACCAAA +
Preference number: 4 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPKQQEW*HNYYTK
Trigger: TTTGGTGTAATAGTTGTGTCACCATTCTTGTTGCTT...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCCTTGTTTTAGGATCTaGCTGCAGGATTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIPCFRI*LQDCKV
Trigger: AACTTTGCAATCCTGCAGTCAGATCCTAAAACAAGG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000610980.4
ENST00000635314.1
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAATGCTTCTGTGCAATaGTGTCCATCCAGACTCTTT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYINASVQ*CPSRLF
Trigger: AAAGAGTCTGGATGGACAGCATTGCACAGAAGCATT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCATGATCCTTAGCAGCTaGCACTTGGGAACAATTATG +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIMILSS*HLGTIM
Trigger: CATAATTGTTCCCAAGTGGCAGCTGCTAAGGATCAT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAAAGAGATGGCACCCTaGAGAATCTTCATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIKEMAP*RIFIFL
Trigger: CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306270.12
ENST00000635454.2
CDS-3UTR GCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTCAGTTTCAACTGTTTTaGACTATACATTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSQFQLF*TIHCCK
Trigger: TTTGCAGCAATGTATAGTGCAAAACAGTTGAAACTG...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTTGGATGAAACTGAATaGAGAGAAGATGCCCATGCA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYILDETE*REDAHA
Trigger: TGCATGGGCATCTTCTCTGCATTCAGTTTCATCCAA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCATCTGCTTACATGTCTaGTGCTTTTGGGCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIICLHV*CFWAEL
Trigger: TAACTCTGCCCAAAAGCAGCAGACATGTAAGCAGAT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAGAAAGGCCTTAATCTaGTTTTCGCTCCCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIRKALI*FSLPFV
Trigger: AACAAAGGGGAGCGAAAACCAGATTAAGGCCTTTCT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGGAATACTACATGAGTTaGTCTATCCTTCATTACAAG +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLEYYMS*SILHYK
Trigger: CTTGTAATGAAGGATAGACCAACTCATGTAGTATTC...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCAGATCCACCAACTCTaGATGATGTTTGCTATTCTG +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIQIHQL*MMFAIL
Trigger: CAGAATAGCAAACATCATCCAGAGTTGGTGGATCTG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTATAAATCCCACTCCTaGAGAACAGATCCACCAACT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIYKSHS*RTDPPT
Trigger: AGTTGGTGGATCTGTTCTCCAGGAGTGGGATTTATA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTTGCCTGTATCTGTCTaGGTACATTACAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYILPVSV*VHYNWK
Trigger: CTTCCAGTTGTAATGTACCCAGACAGATACAGGCAA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCACACTTTTCTCCATTaGGATCTAGCAAACAACCCA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIHTFLH*DLANNP
Trigger: TGGGTTGTTTGCTAGATCCCAATGGAGAAAAGTGTG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAAAGTTGCATCCACTTaGATCTGTGCTGACACTAAC +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIKVAST*ICADTN
Trigger: GTTAGTGTCAGCACAGATCCAAGTGGATGCAACTTT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGTCAAATGCAGACTTCTaGTTATCATCTTCATGGAAA +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLSNADF*LSSSWK
Trigger: TTTCCATGAAGATGATAACCAGAAGTCTGCATTTGA...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCTATATCAGAATGTATTaGCATTTCCAGAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPYIRMY*HFQSCT
Trigger: TGTGCAGCTCTGGAAATGCCAATACATTCTGATATA...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTCAAATAGCTAATATCTaGTCCATCTTGATATGGTGT +
Preference number: 4 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSQIANI*SILIWC
Trigger: ACACCATATCAAGATGGACCAGATATTAGCTATTTG...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAATCCCGGAATGACTTaGATGAAACTGAATGCAGAG +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYINPGMT*MKLNAE
Trigger: CTCTGCATTCAGTTTCATCCAAGTCATTCCGGGATT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CCA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGGCATCTGACAATTTTTaGTGCCTGAGAATTTTCAAT +
Preference number: 4 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLASDNF*CLRIFN
Trigger: ATTGAAAATTCTCAGGCACCAAAAATTGTCAGATGC...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCCCAATAAATCTTGTATaGCATGCTCCTCAATCTGAA +
Preference number: 4 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPPINLV*HAPQSE
Trigger: TTCAGATTGAGGAGCATGCCATACAAGATTTATTGG...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAGATCCACTCCTTTCTaGATAAGCCAATCTAACACT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIRSTPF*ISQSNT
Trigger: AGTGTTAGATTGGCTTATTCAGAAAGGAGTGGATCT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTACAAGATCCAAAGCTaGCAAGCCTTCTTTATCTTG +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIYKIQS*QAFFIL
Trigger: CAAGATAAAGAAGGCTTGTCAGCTTTGGATCTTGTA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCGCCTCAATCTTATCTaGATGAAATCCTGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIRLNLI*MKSCCE
Trigger: TTCACAACAGGATTTCATTCAGATAAGATTGAGGCG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGTTTTAGGATCTGACTaGAGGATTGCAAAGTTGCAT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIVLGSD*RIAKLH
Trigger: ATGCAACTTTGCAATCCTGCAGTCAGATCCTAAAAC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCAGGGAAGAGTCTATTaGCAACTTGAAATGTCACAT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIQGRVY*QLEMSH
Trigger: ATGTGACATTTCAAGTTGGCAATAGACTCTTCCCTG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306270.12
ENST00000635454.2
CDS-3UTR GCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAAAAGAGATGGCACCCTaGAGAATCTTCATCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQKEMAP*RIFIFL
Trigger: CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTT...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGACTCTTCTATCCATTaGTGGAATCATTTTCCGGTA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIDSSIH*WNHFPV
Trigger: TACCGGAAAATGATTCCAGCAATGGATAGAAGAGTC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAATTGGATGAAACTGAATaGAGAGAAGATGCCCATGCA +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQLDETE*REDAHA
Trigger: TGCATGGGCATCTTCTCTGCATTCAGTTTCATCCAA...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCAAACTCTTCAGGGTTaGCAAATGCCTCATAGAAAA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIQTLQG*QMPHRK
Trigger: TTTTCTATGAGGCATTTGGCAACCCTGAAGAGTTTG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAAGAAAGGCCTTAATCTaGTTTTCGCTCCCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQRKALI*FSLPFV
Trigger: AACAAAGGGGAGCGAAAACCAGATTAAGGCCTTTCT...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAACAGATCCACCAACTCTaGATGATGTTTGCTATTCTG +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQQIHQL*MMFAIL
Trigger: CAGAATAGCAAACATCATCCAGAGTTGGTGGATCTG...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAACACACTTTTCTCCATTaGGATCTAGCAAACAACCCA +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQHTFLH*DLANNP
Trigger: TGGGTTGTTTGCTAGATCCCAATGGAGAAAAGTGTG...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAAAAGTTGCATCCACTTaGATCTGTGCTGACACTAAC +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQKVAST*ICADTN
Trigger: GTTAGTGTCAGCACAGATCCAAGTGGATGCAACTTT...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCGCATCTGACAATTTTTaGTGCCTGAGAATTTTCAAT +
Preference number: 4 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPASDNF*CLRIFN
Trigger: ATTGAAAATTCTCAGGCACCAAAAATTGTCAGATGC...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCCCAAACACAAAATTCTaGCCATTAATGAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPPNTKF*PLMNQK
Trigger: CTTCTGATTCATTAATGGCCAGAATTTTGTGTTTGG...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAAGATCCACTCCTTTCTaGATAAGCCAATCTAACACT +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQRSTPF*ISQSNT
Trigger: AGTGTTAGATTGGCTTATTCAGAAAGGAGTGGATCT...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCTTGGTTTGAAGCCATaGGTTAAAAAGTCACAAGTA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYILGLKP*VKKSQV
Trigger: TACTTGTGACTTTTTAACTCATGGCTTCAAACCAAG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306270.12
ENST00000635454.2
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCATATCTGGTCCATCTTaGTATGGTGTAATGACTCTT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIISGPS*YGVMTL
Trigger: AAGAGTCATTACACCATATCAAGATGGACCAGATAT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR TCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAATGAAATCCTGTTGTaGAATCAGGGGACTGTAAAT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYINEILL*NQGTVN
Trigger: ATTTACAGTCCCCTGATTTCACAACAGGATTTCATT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTTAAATATCCATAATTaGAAGGGTGACCAGTCGCTA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYILNIHN*KGDQSL
Trigger: TAGCGACTGGTCACCCTTGCAATTATGGATATTTAA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAGTTTTAGGATCTGACTaGAGGATTGCAAAGTTGCAT +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQVLGSD*RIAKLH
Trigger: ATGCAACTTTGCAATCCTGCAGTCAGATCCTAAAAC...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTATATCAGAATGTATTaGCATTTCCAGAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIYIRMY*HFQSCT
Trigger: TGTGCAGCTCTGGAAATGCCAATACATTCTGATATA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTGGTCCATCTTGATATaGTGTAATGACTCTTCTATC +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIWSILI*CNDSSI
Trigger: GATAGAAGAGTCATTACACCATATCAAGATGGACCA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCCAATAAATCTTGTATaGCATGCTCCTCAATCTGAA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIPINLV*HAPQSE
Trigger: TTCAGATTGAGGAGCATGCCATACAAGATTTATTGG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
3UTR CAA 72 bp ATCTTCTACTTCCAAATAGCTAATATCTGGTCCATCTaGATATGGTGTAATGACTCTTCTATCCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: IFYFQIANIWSI*IWCNDSSIHCW
Trigger: CCAGCAATGGATAGAAGAGTCATTACACCATATCAAGATGGACCAGATATTAGCTATTTGGAAGTAGAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAATATCTGGTCCATCTTaGTATGGTGTAATGACTCTT +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQISGPS*YGVMTL
Trigger: AAGAGTCATTACACCATATCAAGATGGACCAGATAT...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR TCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAAATGAAATCCTGTTGTaGAATCAGGGGACTGTAAAT +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQNEILL*NQGTVN
Trigger: ATTTACAGTCCCCTGATTTCACAACAGGATTTCATT...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAACATCCTTGATAGTTaGAGCATTGTAACAATGACT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYINILDS*SIVTMT
Trigger: AGTCATTGTTACAATGCTGCAACTATCAAGGATGTT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCAGTTTCAACTGTTTTaGACTATACATTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIQFQLF*TIHCCK
Trigger: TTTGCAGCAATGTATAGTGCAAAACAGTTGAAACTG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTCTGACAATTTTTGGTaGCTGAGAATTTTCAATTCC +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYISDNFW*LRIFNS
Trigger: GGAATTGAAAATTCTCAGGCACCAAAAATTGTCAGA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAATACTCTACTGCTCAATaGAAAATGGAGAATATGTGG +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQYSTAQ*KMENMW
Trigger: CCACATATTCTCCATTTTGCATTGAGCAGTAGAGTA...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGAATACTACATGAGTTaGTCTATCCTTCATTACAAG +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIEYYMS*SILHYK
Trigger: CTTGTAATGAAGGATAGACCAACTCATGTAGTATTC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTCAAATGCAGACTTCTaGTTATCATCTTCATGGAAA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYISNADF*LSSSWK
Trigger: TTTCCATGAAGATGATAACCAGAAGTCTGCATTTGA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306270.12
ENST00000635454.2
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTCTTCTATCCATTGCTaGAATCATTTTCCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYISSIHC*NHFPVK
Trigger: TTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCAAATAGCTAATATCTaGTCCATCTTGATATGGTGT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIQIANI*SILIWC
Trigger: ACACCATATCAAGATGGACCAGATATTAGCTATTTG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CCA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGCATCTGACAATTTTTaGTGCCTGAGAATTTTCAAT +
Preference number: 4 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIASDNF*CLRIFN
Trigger: ATTGAAAATTCTCAGGCACCAAAAATTGTCAGATGC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR GCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAAACATCCTTGATAGTTaGAGCATTGTAACAATGACT +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQNILDS*SIVTMT
Trigger: AGTCATTGTTACAATGCTGCAACTATCAAGGATGTT...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR GCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAATCTGACAATTTTTGGTaGCTGAGAATTTTCAATTCC +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQSDNFW*LRIFNS
Trigger: GGAATTGAAAATTCTCAGGCACCAAAAATTGTCAGA...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAATCTTCTATCCATTGCTaGAATCATTTTCCGGTAAAA +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQSSIHC*NHFPVK
Trigger: TTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAACAAATAGCTAATATCTaGTCCATCTTGATATGGTGT +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQQIANI*SILIWC
Trigger: ACACCATATCAAGATGGACCAGATATTAGCTATTTG...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CCA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAACCAAACACAAAATTCTaGCCATTAATGAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQPNTKF*PLMNQK
Trigger: CTTCTGATTCATTAATGGCCAGAATTTTGTGTTTGG...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
3UTR CAA 72 bp AGATTTAGGTTTGCTCTTCTGCCTCTCACTAACTGTTaGAGCTTGATTACTTTTGTAAACTTCAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: RFRFALLPLTNC*SLITFVNFKCR
Trigger: TCTGCATTTGAAGTTTACAAAAGTAATCAAGCTCAAACAGTTAGTGAGAGGCAGAAGAGCAAACCTAAATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS GCA 90 bp TGGTTTTCGCTCCCCTTTGTTACCACAGAAAGGACATCCAAAGCATaGTTCAGGGATCGACACTTTGATGTGCAGTCAGGCATGGGTGAA +
Preference number: 5 (lower is better)
Translates to: WFSLPFVTTERTSKA*FRDRHFDVQSGMGE
Trigger: TTCACCCATGCCTGACTGCACATCAAAGTGTCGATCCCTGAAGCATGCTTTGGATGTCCTTTCTGTGGTAACAAAGGGGAGCGAAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000306270.12
ENST00000369751.2
ENST00000503400.5
ENST00000503631.5
ENST00000505222.5
ENST00000510291.5
ENST00000610980.4
ENST00000634402.1
ENST00000634585.1
ENST00000634695.1
ENST00000634741.1
ENST00000635314.1
ENST00000635384.1
ENST00000635454.2
CDS-3UTR CAA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCACCGGGTTATGAGAAGTaGATCAGCCACCACAAGAAC +
Preference number: 5 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAPGYEK*ISHHKN
Trigger: GTTCTTGTGGTGGCTGATCAACTTCTCATAACCCGG...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTTCAGGGATCGACACTTaGATGTGCAGTCAGGCATGG +
Preference number: 5 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSSGIDT*MCSQAW
Trigger: CCATGCCTGACTGCACATCAAAGTGTCGATCCCTGA...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCAGTCCATCCAGACTCTTaGTCTTTCACCAACAGATCC +
Preference number: 5 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAVHPDS*SFTNRS
Trigger: GGATCTGTTGGTGAAAGACAAAGAGTCTGGATGGAC...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCTCAGGGATCGACACTTaGATGTGCAGTCAGGCATGG +
Preference number: 5 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPSGIDT*MCSQAW
Trigger: CCATGCCTGACTGCACATCAAAGTGTCGATCCCTGA...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGGAAGATAGCCAGGGATaGGGACTGTCTAGAAGTGGT +
Preference number: 5 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLEDSQG*GLSRSG
Trigger: ACCACTTCTAGACAGTCCCAATCCCTGGCTATCTTC...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGTCCATCCAGACTCTTaGTCTTTCACCAACAGATCC +
Preference number: 5 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSVHPDS*SFTNRS
Trigger: GGATCTGTTGGTGAAAGACAAAGAGTCTGGATGGAC...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGTGCAGGATTGCAAAGTaGCATCCACTTGGATCTGTG +
Preference number: 5 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLCRIAK*HPLGSV
Trigger: CACAGATCCAAGTGGATGCAACTTTGCAATCCTGCA...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGATCTGACTGCAGGATaGCAAAGTTGCATCCACTTG +
Preference number: 5 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSDLTAG*QSCIHL
Trigger: CAAGTGGATGCAACTTTGCAATCCTGCAGTCAGATC...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS CCA 90 bp ATAAGCCAATCTAACACTCCTTTCTTTCCACAGGAGGAAACAAGGTaGAGGGCATTCCTGCCAAAAACATCCTTGATAGTTGCAGCATTG +
Preference number: 5 (lower is better)
Translates to: ISQSNTPFFPQEETR*RAFLPKTSLIVAAL
Trigger: CAATGCTGCAACTATCAAGGATGTTTTTGGCAGGAATGCCCTCCACCTTGTTTCCTCCTGTGGAAAGAAAGGAGTGTTAGATTGGCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000306270.12
ENST00000369751.2
ENST00000503400.5
ENST00000503631.5
ENST00000505222.5
ENST00000510291.5
ENST00000610980.4
ENST00000634402.1
ENST00000634585.1
ENST00000634695.1
ENST00000634741.1
ENST00000635314.1
ENST00000635384.1
ENST00000635454.2
CDS CCA 90 bp CTGCTTGATATAAATCCCACTCCTGGAGAACAGATCCACCAACTCTaGATGATGTTTGCTATTCTGGCTTCCATGACCCAGGGTAAAATT +
Preference number: 5 (lower is better)
Translates to: LLDINPTPGEQIHQL*MMFAILASMTQGKI
Trigger: AATTTTACCCTGGGTCATGGAAGCCAGAATAGCAAACATCATCCAGAGTTGGTGGATCTGTTCTCCAGGAGTGGGATTTATATCAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000306270.12
ENST00000369751.2
ENST00000503400.5
ENST00000503631.5
ENST00000505222.5
ENST00000510291.5
ENST00000610980.4
ENST00000634402.1
ENST00000634585.1
ENST00000634695.1
ENST00000634741.1
ENST00000635314.1
ENST00000635384.1
ENST00000635454.2
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTCAGGGATCGACACTTaGATGTGCAGTCAGGCATGG +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYISGIDT*MCSQAW
Trigger: CCATGCCTGACTGCACATCAAAGTGTCGATCCCTGA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CAA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGCTTAGCAGCTGCCACTaGGGAACAATTATGACCATT +
Preference number: 5 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLLSSCH*GTIMTI
Trigger: AATGGTCATAATTGTTCCCAAGTGGCAGCTGCTAAG...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCACCATTAACATACGGTTaGACTTTCGCCTCAATCTTA +
Preference number: 5 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAPLTYG*TFASIL
Trigger: TAAGATTGAGGCGAAAGTCAAACCGTATGTTAATGG...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCACAAGCCTTCTTTATCTaGAATATACAGACTAACACC +
Preference number: 5 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAQAFFI*NIQTNT
Trigger: GGTGTTAGTCTGTATATTCAAGATAAAGAAGGCTTG...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCAGAGTCTATTGCCAACTaGAAATGTCACATCATGAAT +
Preference number: 5 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAESIAN*KCHIMN
Trigger: ATTCATGATGTGACATTTCAAGTTGGCAATAGACTC...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCACCTCTCACTAACTGTTaGAGCTTGATTACTTTTGTA +
Preference number: 5 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAPLTNC*SLITFV
Trigger: TACAAAAGTAATCAAGCTCAAACAGTTAGTGAGAGG...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCATTTCTTTGCAACAGTTaGCAACATTCTTACAGGATC +
Preference number: 5 (lower is better)
Translates to: LVVTQTVAPSLAATKDRAFLCNS*QHSYRI
Trigger: GATCCTGTAAGAATGTTGCAAACTGTTGCAAAGAAA...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCCGGGTTATGAGAAGTaGATCAGCCACCACAAGAAC +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIPGYEK*ISHHKN
Trigger: GTTCTTGTGGTGGCTGATCAACTTCTCATAACCCGG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CAA 90 bp CTTGTGGTAACACAGACTGTAGCTCCATCACTTGCAGCAACCAAAGACAGAGCAACAGTTTCAACTGTTTaGCACTATACATTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: LVVTQTVAPSLAATKDRATVSTV*HYTLLQ
Trigger: TTGCAGCAATGTATAGTGCAAAACAGTTGAAACTGT...TGCTCTGTCTTTGGTTGCTGCAAGTGATGGAGCTACAGTCTGTGTTACCACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTAAACATCAAGAGACCTaGCTTCAAGTAAAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSKHQET*LQVKLP
Trigger: TGGCAGCTTTACTTGAAGCAAGGTCTCTTGATGTTT...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGAAACATCAAGAGACCTaGCTTCAAGTAAAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLKHQET*LQVKLP
Trigger: TGGCAGCTTTACTTGAAGCAAGGTCTCTTGATGTTT...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTAAATCCCGGAATGACTaGGATGAAACTGAATGCAGA +
Preference number: 5 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSKSRND*DETECR
Trigger: TCTGCATTCAGTTTCATCCAAGTCATTCCGGGATTT...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGAAGATAGCCAGGGATaGGGACTGTCTAGAAGTGGT +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIEDSQG*GLSRSG
Trigger: ACCACTTCTAGACAGTCCCAATCCCTGGCTATCTTC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGGTTTTCGCTCCCCTTaGTTACCACAGAAAGGACAT +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIGFRSP*LPQKGH
Trigger: ATGTCCTTTCTGTGGTAACAAAGGGGAGCGAAAACC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGTCCATCCAGACTCTTaGTCTTTCACCAACAGATCC +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIVHPDS*SFTNRS
Trigger: GGATCTGTTGGTGAAAGACAAAGAGTCTGGATGGAC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTGCAGGATTGCAAAGTaGCATCCACTTGGATCTGTG +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYICRIAK*HPLGSV
Trigger: CACAGATCCAAGTGGATGCAACTTTGCAATCCTGCA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGATCTGACTGCAGGATaGCAAAGTTGCATCCACTTG +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIDLTAG*QSCIHL
Trigger: CAAGTGGATGCAACTTTGCAATCCTGCAGTCAGATC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CAA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAACCGGGTTATGAGAAGTaGATCAGCCACCACAAGAAC +
Preference number: 5 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQPGYEK*ISHHKN
Trigger: GTTCTTGTGGTGGCTGATCAACTTCTCATAACCCGG...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGGTTTTGCACTATACATaGCTGCAAATTCCAGTAGCA +
Preference number: 5 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLVLHYT*LQIPVA
Trigger: TGCTACTGGAATTTGCAGCAATGTATAGTGCAAAAC...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAGAAGATAGCCAGGGATaGGGACTGTCTAGAAGTGGT +
Preference number: 5 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQEDSQG*GLSRSG
Trigger: ACCACTTCTAGACAGTCCCAATCCCTGGCTATCTTC...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCACATGTCTGCTGCTTTaGGGCAGAGTTAAACCTGAC +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYITCLLL*GRVKPD
Trigger: GTCAGGTTTAACTCTGCCCAAAAGCAGCAGACATGT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CAA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAGGTTTTCGCTCCCCTTaGTTACCACAGAAAGGACAT +
Preference number: 5 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQGFRSP*LPQKGH
Trigger: ATGTCCTTTCTGTGGTAACAAAGGGGAGCGAAAACC...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCTTAGCAGCTGCCACTaGGGAACAATTATGACCATT +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYILSSCH*GTIMTI
Trigger: AATGGTCATAATTGTTCCCAAGTGGCAGCTGCTAAG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCACACACTTTTCTCCATaGGGATCTAGCAAACAACCC +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYITHFSP*GSSKQP
Trigger: GGGTTGTTTGCTAGATCCCAATGGAGAAAAGTGTGT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTGCTTCAGAGAACTGTaGACTGATCTCCAGCAAAAC +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYICFREL*TDLQQN
Trigger: GTTTTGCTGGAGATCAGTCAACAGTTCTCTGAAGCA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CAA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAATGCAGGATTGCAAAGTaGCATCCACTTGGATCTGTG +
Preference number: 5 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQCRIAK*HPLGSV
Trigger: CACAGATCCAAGTGGATGCAACTTTGCAATCCTGCA...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAGATCTGACTGCAGGATaGCAAAGTTGCATCCACTTG +
Preference number: 5 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQDLTAG*QSCIHL
Trigger: CAAGTGGATGCAACTTTGCAATCCTGCAGTCAGATC...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp ACCCCCATTTTCTTTCAAATGTTCAGGATCAACCTTGTATTCCATATGACCCCCTTACAAGATTTAGGTTaGCTCTTCTGCCTCTCACTA +
Preference number: 5 (lower is better)
Translates to: TPIFFQMFRINLVFHMTPLQDLG*LFCLSL
Trigger: TAGTGAGAGGCAGAAGAGCAAACCTAAATCTTGTAA...GGGGGTCATATGGAATACAAGGTTGATCCTGAACATTTGAAAGAAAATGGGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGTTTCTTTGCAACAGTTaGCAACATTCTTACAGGATC +
Preference number: 5 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLFLCNS*QHSYRI
Trigger: GATCCTGTAAGAATGTTGCAAACTGTTGCAAAGAAA...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp GATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTAATATCTGGTCCATCTaGATATGGTGTAATGACTCT +
Preference number: 5 (lower is better)
Translates to: DEPSLPQRDGTLQNLHLSNIWSI*IWCNDS
Trigger: AGAGTCATTACACCATATCAAGATGGACCAGATATT...AGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp ATGAACCTTCTCTACCACAAAGAGATGGCACCCTGCAGAATCTTCATCTTTCTGAATATCTGGTCCATCTaGATATGGTGTAATGACTCT +
Preference number: 5 (lower is better)
Translates to: MNLLYHKEMAPCRIFIFLNIWSI*IWCNDS
Trigger: AGAGTCATTACACCATATCAAGATGGACCAGATATT...CAGAAAGATGAAGATTCTGCAGGGTGCCATCTCTTTGTGGTAGAGAAGGTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAACTTAGCAGCTGCCACTaGGGAACAATTATGACCATT +
Preference number: 5 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQLSSCH*GTIMTI
Trigger: AATGGTCATAATTGTTCCCAAGTGGCAGCTGCTAAG...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAACACACTTTTCTCCATaGGGATCTAGCAAACAACCC +
Preference number: 5 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQTHFSP*GSSKQP
Trigger: GGGTTGTTTGCTAGATCCCAATGGAGAAAAGTGTGT...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAAACATCAAGAGACCTaGCTTCAAGTAAAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIKHQET*LQVKLP
Trigger: TGGCAGCTTTACTTGAAGCAAGGTCTCTTGATGTTT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAAATCCCGGAATGACTaGGATGAAACTGAATGCAGA +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIKSRND*DETECR
Trigger: TCTGCATTCAGTTTCATCCAAGTCATTCCGGGATTT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS GCA 90 bp GCTACATATGAGCCCTCCAACATATCACAAATTTCAAAAAGAACTTaGATCACAAGCCTTAACTCTTTGGCTTTTGTAGCCAATAGTCCA +
Preference number: 5 (lower is better)
Translates to: ATYEPSNISQISKRT*ITSLNSLAFVANSP
Trigger: TGGACTATTGGCTACAAAAGCCAAAGAGTTAAGGCTTGTGATGCAAGTTCTTTTTGAAATTTGTGATATGTTGGAGGGCTCATATGTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369751.2
ENST00000505222.5
ENST00000634402.1
ENST00000634741.1
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTTACAAGATTTAGGTTaGCTCTTCTGCCTCTCACTA +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYILQDLG*LFCLSL
Trigger: TAGTGAGAGGCAGAAGAGCAAACCTAAATCTTGTAA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306270.12
ENST00000635454.2
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCATATATCAGAATGTATaGGCATTTCCAGAGCTGCAC +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIIYQNV*AFPELH
Trigger: GTGCAGCTCTGGAAATGCCAATACATTCTGATATAT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGTTTTGCACTATACATaGCTGCAAATTCCAGTAGCA +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIVLHYT*LQIPVA
Trigger: TGCTACTGGAATTTGCAGCAATGTATAGTGCAAAAC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCCATTAACATACGGTTaGACTTTCGCCTCAATCTTA +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIPLTYG*TFASIL
Trigger: TAAGATTGAGGCGAAAGTCAAACCGTATGTTAATGG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CAA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAAAATCCCGGAATGACTaGGATGAAACTGAATGCAGA +
Preference number: 5 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQKSRND*DETECR
Trigger: TCTGCATTCAGTTTCATCCAAGTCATTCCGGGATTT...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCAAGCCTTCTTTATCTaGAATATACAGACTAACACC +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIQAFFI*NIQTNT
Trigger: GGTGTTAGTCTGTATATTCAAGATAAAGAAGGCTTG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGAGTCTATTGCCAACTaGAAATGTCACATCATGAAT +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIESIAN*KCHIMN
Trigger: ATTCATGATGTGACATTTCAAGTTGGCAATAGACTC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306270.12
ENST00000635454.2
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCCCTCTCACTAACTGTTaGAGCTTGATTACTTTTGTA +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIPLTNC*SLITFV
Trigger: TACAAAAGTAATCAAGCTCAAACAGTTAGTGAGAGG...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306270.12
ENST00000635454.2
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCTTTCTTTGCAACAGTTaGCAACATTCTTACAGGATC +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIFLCNS*QHSYRI
Trigger: GATCCTGTAAGAATGTTGCAAACTGTTGCAAAGAAA...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306270.12
ENST00000635454.2
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCACAGTTTCAACTGTTTaGCACTATACATTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYITVSTV*HYTLLQ
Trigger: TTGCAGCAATGTATAGTGCAAAACAGTTGAAACTGT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCAATATCTGGTCCATCTaGATATGGTGTAATGACTCT +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYINIWSI*IWCNDS
Trigger: AGAGTCATTACACCATATCAAGATGGACCAGATATT...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS-3UTR CAA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAACCATTAACATACGGTTaGACTTTCGCCTCAATCTTA +
Preference number: 5 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQPLTYG*TFASIL
Trigger: TAAGATTGAGGCGAAAGTCAAACCGTATGTTAATGG...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS-3UTR CAA 90 bp CTTTTGGGCAGAGTTAAACCTGACATATTGAGTCAGTTTCCGTCATTTTACATCGTTAAACCTGACATATaGAGTCAGTTTCCGTCATTT +
Preference number: 5 (lower is better)
Translates to: LLGRVKPDILSQFPSFYIVKPDI*SQFPSF
Trigger: AAATGACGGAAACTGACTCAATATGTCAGGTTTAAC...GATGTAAAATGACGGAAACTGACTCAATATGTCAGGTTTAACTCTGCCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306270.12
ENST00000610980.4
ENST00000635314.1
ENST00000635454.2
CDS TCA 90 bp CTATCCTTCATTACAAGATCCAAAGCTGACAAGCCTTCTTTATCTTaGATATACAGACTAACACCATGCTTCAATAGAGACCAAACACAA +
Preference number: 5 (lower is better)
Translates to: LSFITRSKADKPSLS*IYRLTPCFNRDQTQ
Trigger: TTGTGTTTGGTCTCTATTGAAGCATGGTGTTAGTCTGTATATTCAAGATAAAGAAGGCTTGTCAGCTTTGGATCTTGTAATGAAGGATAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000306270.12
ENST00000369751.2
ENST00000503400.5
ENST00000503631.5
ENST00000505222.5
ENST00000510291.5
ENST00000610980.4
ENST00000634402.1
ENST00000634585.1
ENST00000634695.1
ENST00000634741.1
ENST00000635314.1
ENST00000635384.1
ENST00000635454.2
CDS TCA 90 bp GAATACTACATGAGTTGGTCTATCCTTCATTACAAGATCCAAAGCTaGCAAGCCTTCTTTATCTTGAATATACAGACTAACACCATGCTT +
Preference number: 5 (lower is better)
Translates to: EYYMSWSILHYKIQS*QAFFILNIQTNTML
Trigger: AAGCATGGTGTTAGTCTGTATATTCAAGATAAAGAAGGCTTGTCAGCTTTGGATCTTGTAATGAAGGATAGACCAACTCATGTAGTATTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000306270.12
ENST00000369751.2
ENST00000503400.5
ENST00000503631.5
ENST00000505222.5
ENST00000510291.5
ENST00000610980.4
ENST00000634402.1
ENST00000634585.1
ENST00000634695.1
ENST00000634741.1
ENST00000635314.1
ENST00000635384.1
ENST00000635454.2
CDS-3UTR CAA 90 bp TCTTCTATCCATTGCTGGAATCATTTTCCGGTAAAACTCAGAAAGATCCTTCAAACAGTTTCAACTGTTTaGCACTATACATTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: SSIHCWNHFPVKLRKILQTVSTV*HYTLLQ
Trigger: TTGCAGCAATGTATAGTGCAAAACAGTTGAAACTGT...TTGAAGGATCTTTCTGAGTTTTACCGGAAAATGATTCCAGCAATGGATAGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503400.5
ENST00000634585.1
CDS GCA 72 bp GCCAGTCCCCAGACCCGGGTCAGTTCGGCAGGCGGCTaGAATACAGCCGCTACTACAGGAATCGGGAACGGG +
Preference number: 6 (lower is better)
Translates to: ASPQTRVSSAGG*NTAATTGIGNG
Trigger: CCCGTTCCCGATTCCTGTAGTAGCGGCTGTATTGCAGCCGCCTGCCGAACTGACCCGGGTCTGGGGACTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306270.12
ENST00000369751.2
ENST00000610980.4
ENST00000634402.1
ENST00000635314.1
ENST00000635454.2
CDS GCA 72 bp CTCCCCTTTGTTACCACAGAAAGGACATCCAAAGCATaGTTCAGGGATCGACACTTTGATGTGCAGTCAGGC +
Preference number: 6 (lower is better)
Translates to: LPFVTTERTSKA*FRDRHFDVQSG
Trigger: GCCTGACTGCACATCAAAGTGTCGATCCCTGAAGCATGCTTTGGATGTCCTTTCTGTGGTAACAAAGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000306270.12
ENST00000369751.2
ENST00000503400.5
ENST00000503631.5
ENST00000505222.5
ENST00000510291.5
ENST00000610980.4
ENST00000634402.1
ENST00000634585.1
ENST00000634695.1
ENST00000634741.1
ENST00000635314.1
ENST00000635384.1
ENST00000635454.2
CDS CCA 72 bp ATAAATCCCACTCCTGGAGAACAGATCCACCAACTCTaGATGATGTTTGCTATTCTGGCTTCCATGACCCAG +
Preference number: 6 (lower is better)
Translates to: INPTPGEQIHQL*MMFAILASMTQ
Trigger: CTGGGTCATGGAAGCCAGAATAGCAAACATCATCCAGAGTTGGTGGATCTGTTCTCCAGGAGTGGGATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000306270.12
ENST00000369751.2
ENST00000503400.5
ENST00000503631.5
ENST00000505222.5
ENST00000510291.5
ENST00000610980.4
ENST00000634402.1
ENST00000634585.1
ENST00000634695.1
ENST00000634741.1
ENST00000635314.1
ENST00000635384.1
ENST00000635454.2
CDS CAA 90 bp ACTCCATCTAACCTTGTTTTAGGATCTGACTGCAGGATTGCAAAGTaGCATCCACTTGGATCTGTGCTGACACTAACAGCTCTATGTGCA +
Preference number: 6 (lower is better)
Translates to: TPSNLVLGSDCRIAK*HPLGSVLTLTALCA
Trigger: TGCACATAGAGCTGTTAGTGTCAGCACAGATCCAAGTGGATGCAACTTTGCAATCCTGCAGTCAGATCCTAAAACAAGGTTAGATGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000503631.5
ENST00000505222.5
ENST00000610980.4
ENST00000634695.1
ENST00000634741.1
ENST00000635314.1
CDS CAA 72 bp AACCTTGTTTTAGGATCTGACTGCAGGATTGCAAAGTaGCATCCACTTGGATCTGTGCTGACACTAACAGCT +
Preference number: 6 (lower is better)
Translates to: NLVLGSDCRIAK*HPLGSVLTLTA
Trigger: AGCTGTTAGTGTCAGCACAGATCCAAGTGGATGCAACTTTGCAATCCTGCAGTCAGATCCTAAAACAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000503631.5
ENST00000505222.5
ENST00000610980.4
ENST00000634695.1
ENST00000634741.1
ENST00000635314.1
CDS GCA 72 bp AATCTGACTCCATCTAACCTTGTTTTAGGATCTGACTaGAGGATTGCAAAGTTGCATCCACTTGGATCTGTG +
Preference number: 6 (lower is better)
Translates to: NLTPSNLVLGSD*RIAKLHPLGSV
Trigger: CACAGATCCAAGTGGATGCAACTTTGCAATCCTGCAGTCAGATCCTAAAACAAGGTTAGATGGAGTCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000503631.5
ENST00000505222.5
ENST00000610980.4
ENST00000634695.1
ENST00000634741.1
ENST00000635314.1
CDS CAA 90 bp CTGCACTCAGCCTTAATGTTTTCAATGCTAAGCAGCAACTTAGCTTaGGAGGCCCATAACTTATCAATTAACCTTACTTGGGACTGTCTA +
Preference number: 6 (lower is better)
Translates to: LHSALMFSMLSSNLA*EAHNLSINLTWDCL
Trigger: TAGACAGTCCCAAGTAAGGTTAATTGATAAGTTATGGGCCTCCAAAGCTAAGTTGCTGCTTAGCATTGAAAACATTAAGGCTGAGTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508381.1
ENST00000635425.1
CDS CAA 72 bp GCCTTAATGTTTTCAATGCTAAGCAGCAACTTAGCTTaGGAGGCCCATAACTTATCAATTAACCTTACTTGG +
Preference number: 6 (lower is better)
Translates to: ALMFSMLSSNLA*EAHNLSINLTW
Trigger: CCAAGTAAGGTTAATTGATAAGTTATGGGCCTCCAAAGCTAAGTTGCTGCTTAGCATTGAAAACATTAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508381.1
ENST00000635425.1
CDS TCA 72 bp ATGAGTTGGTCTATCCTTCATTACAAGATCCAAAGCTaGCAAGCCTTCTTTATCTTGAATATACAGACTAAC +
Preference number: 6 (lower is better)
Translates to: MSWSILHYKIQS*QAFFILNIQTN
Trigger: GTTAGTCTGTATATTCAAGATAAAGAAGGCTTGTCAGCTTTGGATCTTGTAATGAAGGATAGACCAACTCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000306270.12
ENST00000369751.2
ENST00000503400.5
ENST00000503631.5
ENST00000505222.5
ENST00000510291.5
ENST00000610980.4
ENST00000634402.1
ENST00000634585.1
ENST00000634695.1
ENST00000634741.1
ENST00000635314.1
ENST00000635384.1
ENST00000635454.2