Pregenerated sensors for IBA57-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000203684Ensembl transcript IDs: ENST00000366713.1, ENST00000496552.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ATGTCAACAGGGTGCATGGGCCCCAGGAGGCCAGCAAGGCAGGGATaGCTTGGACCAGGGCAGTCAGACTCTAGGGCTGAAGGCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: MSTGCMGPRRPARQG*LGPGQSDSRAEGCW Trigger: CCAGCAGCCTTCAGCCCTAGAGTCTGACTGCCCTGGTCCAAGCCATCCCTGCCTTGCTGGCCTCCTGGGGCCCATGCACCCTGTTGACAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366713.1 ENST00000496552.1 |
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| CDS GCA 90 bp | TGGTGCTTTGAGTGGAGGGCAGTGGAGAGGGGAATGTCAACAGGGTaGATGGGCCCCAGGAGGCCAGCAAGGCAGGGATGGCTTGGACCA | + |
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Preference number: 5 (lower is better) Translates to: WCFEWRAVERGMSTG*MGPRRPARQGWLGP Trigger: TGGTCCAAGCCATCCCTGCCTTGCTGGCCTCCTGGGGCCCATGCACCCTGTTGACATTCCCCTCTCCACTGCCCTCCACTCAAAGCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000366713.1 ENST00000496552.1 |
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| CDS CCA 90 bp | GGGGTTGTGGGCTGGATGGTGCCTGTCCTTATCCGTGGAGACACTTaGGGATGGAGCCTCCTGCCACCTGCAGCTGAAGTCCCAATGGTC | + |
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Preference number: 5 (lower is better) Translates to: GVVGWMVPVLIRGDT*GWSLLPPAAEVPMV Trigger: GACCATTGGGACTTCAGCTGCAGGTGGCAGGAGGCTCCATCCCCAAGTGTCTCCACGGATAAGGACAGGCACCATCCAGCCCACAACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496552.1 |
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| CDS CCA 90 bp | GTGGGCTGGATGGTGCCTGTCCTTATCCGTGGAGACACTTGGGGATaGAGCCTCCTGCCACCTGCAGCTGAAGTCCCAATGGTCCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: VGWMVPVLIRGDTWG*SLLPPAAEVPMVQQ Trigger: TTGCTGGACCATTGGGACTTCAGCTGCAGGTGGCAGGAGGCTCCATCCCCAAGTGTCTCCACGGATAAGGACAGGCACCATCCAGCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496552.1 |
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| CDS GCA 90 bp | CAGGGATGGCTTGGACCAGGGCAGTCAGACTCTAGGGCTGAAGGCTaGTGGGGCCACCTTGTAGATGTGTCACCTACTACCAGGGAAAGT | + |
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Preference number: 5 (lower is better) Translates to: QGWLGPGQSDSRAEG*WGHLVDVSPTTRES Trigger: ACTTTCCCTGGTAGTAGGTGACACATCTACAAGGTGGCCCCAGCAGCCTTCAGCCCTAGAGTCTGACTGCCCTGGTCCAAGCCATCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366713.1 ENST00000496552.1 |
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| CDS CCA 90 bp | CTGCTGGGGCCACCTTGTAGATGTGTCACCTACTACCAGGGAAAGTaGCCACTGTACAGGGCTGCTCAGCAGGGGGTATGGGACATCACT | + |
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Preference number: 5 (lower is better) Translates to: LLGPPCRCVTYYQGK*PLYRAAQQGVWDIT Trigger: AGTGATGTCCCATACCCCCTGCTGAGCAGCCCTGTACAGTGGCCACTTTCCCTGGTAGTAGGTGACACATCTACAAGGTGGCCCCAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000366713.1 ENST00000496552.1 |
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| CDS CCA 90 bp | TACCAGGGAAAGTGGCCACTGTACAGGGCTGCTCAGCAGGGGGTATaGGACATCACTCCTCGAGAAAGCACGGTGGGGTGGATATGTCAT | + |
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Preference number: 5 (lower is better) Translates to: YQGKWPLYRAAQQGV*DITPRESTVGWICH Trigger: ATGACATATCCACCCCACCGTGCTTTCTCGAGGAGTGATGTCCCATACCCCCTGCTGAGCAGCCCTGTACAGTGGCCACTTTCCCTGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000366713.1 ENST00000496552.1 |
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| CDS CCA 90 bp | ACTCCTCGAGAAAGCACGGTGGGGTGGATATGTCATAGCAGTGTGTaGTTCCTGCCTAAATTGTCCTCTGTGAGTTCAGCGAGGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: TPRESTVGWICHSSV*FLPKLSSVSSARVE Trigger: CTCCACCCTCGCTGAACTCACAGAGGACAATTTAGGCAGGAACCACACACTGCTATGACATATCCACCCCACCGTGCTTTCTCGAGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366713.1 |
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| CDS CCA 90 bp | CAGCAGGGGGTATGGGACATCACTCCTCGAGAAAGCACGGTGGGGTaGATATGTCATAGCAGTGTGTGGTTCCTGCCTAAATTGTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: QQGVWDITPRESTVG*ICHSSVWFLPKLSS Trigger: AGAGGACAATTTAGGCAGGAACCACACACTGCTATGACATATCCACCCCACCGTGCTTTCTCGAGGAGTGATGTCCCATACCCCCTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000366713.1 ENST00000496552.1 |
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| CDS CCA 90 bp | CTGCTCAGCAGGGGGTATGGGACATCACTCCTCGAGAAAGCACGGTaGGGTGGATATGTCATAGCAGTGTGTGGTTCCTGCCTAAATTGT | + |
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Preference number: 5 (lower is better) Translates to: LLSRGYGTSLLEKAR*GGYVIAVCGSCLNC Trigger: ACAATTTAGGCAGGAACCACACACTGCTATGACATATCCACCCCACCGTGCTTTCTCGAGGAGTGATGTCCCATACCCCCTGCTGAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000366713.1 ENST00000496552.1 |
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| CDS TCA 90 bp | ACTCTGCACCATAAGGACACATTGAGTAAGTCTTCTTTGGTGCTTTaGGTGGAGGGCAGTGGAGAGGGGAATGTCAACAGGGTGCATGGG | + |
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Preference number: 5 (lower is better) Translates to: TLHHKDTLSKSSLVL*VEGSGEGNVNRVHG Trigger: CCCATGCACCCTGTTGACATTCCCCTCTCCACTGCCCTCCACTCAAAGCACCAAAGAAGACTTACTCAATGTGTCCTTATGGTGCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366713.1 ENST00000496552.1 |
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| CDS CCA 72 bp | AGGGGTTGTGGGCTGGATGGTGCCTGTCCTTATCCGTaGAGACACTTGGGGATGGAGCCTCCTGCCACCTGC | + |
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Preference number: 6 (lower is better) Translates to: RGCGLDGACPYP*RHLGMEPPATC Trigger: GCAGGTGGCAGGAGGCTCCATCCCCAAGTGTCTCCACGGATAAGGACAGGCACCATCCAGCCCACAACCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496552.1 |
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| CDS CCA 72 bp | AAGTGGCCACTGTACAGGGCTGCTCAGCAGGGGGTATaGGACATCACTCCTCGAGAAAGCACGGTGGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: KWPLYRAAQQGV*DITPRESTVGW Trigger: CCACCCCACCGTGCTTTCTCGAGGAGTGATGTCCCATACCCCCTGCTGAGCAGCCCTGTACAGTGGCCACTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000366713.1 ENST00000496552.1 |
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| CDS CCA 72 bp | GGCTGGATGGTGCCTGTCCTTATCCGTGGAGACACTTaGGGATGGAGCCTCCTGCCACCTGCAGCTGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: GWMVPVLIRGDT*GWSLLPPAAEV Trigger: GACTTCAGCTGCAGGTGGCAGGAGGCTCCATCCCCAAGTGTCTCCACGGATAAGGACAGGCACCATCCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496552.1 |
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| CDS CCA 72 bp | GGACCAGGGCAGTCAGACTCTAGGGCTGAAGGCTGCTaGGGCCACCTTGTAGATGTGTCACCTACTACCAGG | + |
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Preference number: 6 (lower is better) Translates to: GPGQSDSRAEGC*GHLVDVSPTTR Trigger: CCTGGTAGTAGGTGACACATCTACAAGGTGGCCCCAGCAGCCTTCAGCCCTAGAGTCTGACTGCCCTGGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000366713.1 ENST00000496552.1 |
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| CDS GCA 72 bp | CTTGGACCAGGGCAGTCAGACTCTAGGGCTGAAGGCTaGTGGGGCCACCTTGTAGATGTGTCACCTACTACC | + |
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Preference number: 6 (lower is better) Translates to: LGPGQSDSRAEG*WGHLVDVSPTT Trigger: GGTAGTAGGTGACACATCTACAAGGTGGCCCCAGCAGCCTTCAGCCCTAGAGTCTGACTGCCCTGGTCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000366713.1 ENST00000496552.1 |
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| CDS GCA 72 bp | TCCTTATCCGTGGAGACACTTGGGGATGGAGCCTCCTaGCACCTGCAGCTGAAGTCCCAATGGTCCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: SLSVETLGDGAS*HLQLKSQWSSK Trigger: TTTGCTGGACCATTGGGACTTCAGCTGCAGGTGGCAGGAGGCTCCATCCCCAAGTGTCTCCACGGATAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496552.1 |
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| CDS CCA 72 bp | CCACCTTGTAGATGTGTCACCTACTACCAGGGAAAGTaGCCACTGTACAGGGCTGCTCAGCAGGGGGTATGG | + |
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Preference number: 6 (lower is better) Translates to: PPCRCVTYYQGK*PLYRAAQQGVW Trigger: CCATACCCCCTGCTGAGCAGCCCTGTACAGTGGCCACTTTCCCTGGTAGTAGGTGACACATCTACAAGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000366713.1 ENST00000496552.1 |
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| CDS CCA 72 bp | CATCATGTCACACTGATTAGGGGTGCGGAGGGGTTGTaGGCTGGATGGTGCCTGTCCTTATCCGTGGAGACA | + |
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Preference number: 6 (lower is better) Translates to: HHVTLIRGAEGL*AGWCLSLSVET Trigger: TGTCTCCACGGATAAGGACAGGCACCATCCAGCCCACAACCCCTCCGCACCCCTAATCAGTGTGACATGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496552.1 |
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| CDS CAA 72 bp | TCTCATCATGTCACACTGATTAGGGGTGCGGAGGGGTaGTGGGCTGGATGGTGCCTGTCCTTATCCGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SHHVTLIRGAEG*WAGWCLSLSVE Trigger: CTCCACGGATAAGGACAGGCACCATCCAGCCCACAACCCCTCCGCACCCCTAATCAGTGTGACATGATGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496552.1 |
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| CDS CAA 90 bp | GTGATTGTGTCTCATCATGTCACACTGATTAGGGGTGCGGAGGGGTaGTGGGCTGGATGGTGCCTGTCCTTATCCGTGGAGACACTTGGG | + |
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Preference number: 6 (lower is better) Translates to: VIVSHHVTLIRGAEG*WAGWCLSLSVETLG Trigger: CCCAAGTGTCTCCACGGATAAGGACAGGCACCATCCAGCCCACAACCCCTCCGCACCCCTAATCAGTGTGACATGATGAGACACAATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496552.1 |
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| CDS CCA 72 bp | AGGGGGTATGGGACATCACTCCTCGAGAAAGCACGGTaGGGTGGATATGTCATAGCAGTGTGTGGTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: RGYGTSLLEKAR*GGYVIAVCGSC Trigger: GCAGGAACCACACACTGCTATGACATATCCACCCCACCGTGCTTTCTCGAGGAGTGATGTCCCATACCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000366713.1 ENST00000496552.1 |
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| CDS CAA 72 bp | TGGATATGTCATAGCAGTGTGTGGTTCCTGCCTAAATaGTCCTCTGTGAGTTCAGCGAGGGTGGAGCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: WICHSSVWFLPK*SSVSSARVEPA Trigger: CGCAGGCTCCACCCTCGCTGAACTCACAGAGGACAATTTAGGCAGGAACCACACACTGCTATGACATATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366713.1 |
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| CDS CCA 72 bp | GAAAGCACGGTGGGGTGGATATGTCATAGCAGTGTGTaGTTCCTGCCTAAATTGTCCTCTGTGAGTTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: ESTVGWICHSSV*FLPKLSSVSSA Trigger: CGCTGAACTCACAGAGGACAATTTAGGCAGGAACCACACACTGCTATGACATATCCACCCCACCGTGCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366713.1 |
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| CDS CCA 72 bp | GAAAGCACGGTGGGGTGGATATGTCATAGCAGTGTGTaGTTCCTGCCTAAATTGTCCTCTGTGAGTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: ESTVGWICHSSV*FLPKLSSVSSA Trigger: TGCTGAACTCACAGAGGACAATTTAGGCAGGAACCACACACTGCTATGACATATCCACCCCACCGTGCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496552.1 |
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