Pregenerated sensors for IATPR (Homo sapiens)

Ensembl gene IDs: ENSG00000233387

Ensembl transcript IDs: ENST00000414308.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AAACACGGCTTCTGGTCAAAGTTCATGACTGCTTCATCACCACTTTaGTATTTGCAAAGGGGCTTCATGATCATTTTCAGTCCTGAGTCA	+
Preference number: 5 (lower is better) Translates to: KHGFWSKFMTASSPL*YLQRGFMIIFSPES Trigger: TGACTCAGGACTGAAAATGATCATGAAGCCCCTTTGCAAATATCAAAGTGGTGATGAAGCAGTCATGAACTTTGACCAGAAGCCGTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414308.1
CDS CCA 72 bp	GGCTGCAGTCCTAATGATGAACAGGAGCGATTAAAGTaGCAATCCCACAAAACACGGCTTCTGGTCAAAGTT	+
Preference number: 6 (lower is better) Translates to: GCSPNDEQERLK*QSHKTRLLVKV Trigger: AACTTTGACCAGAAGCCGTGTTTTGTGGGATTGCCACTTTAATCGCTCCTGTTCATCATTAGGACTGCAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414308.1
CDS TCA 72 bp	TTCTGGTCAAAGTTCATGACTGCTTCATCACCACTTTaGTATTTGCAAAGGGGCTTCATGATCATTTTCAGT	+
Preference number: 6 (lower is better) Translates to: FWSKFMTASSPL*YLQRGFMIIFS Trigger: ACTGAAAATGATCATGAAGCCCCTTTGCAAATATCAAAGTGGTGATGAAGCAGTCATGAACTTTGACCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414308.1

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