Pregenerated sensors for IAPP (Homo sapiens)
Ensembl gene IDs: ENSG00000121351Ensembl transcript IDs: ENST00000240652.8, ENST00000535428.1, ENST00000537593.1, ENST00000539393.5, ENST00000542023.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ACTACCGCTACCACTTACCACCACCAACGAAAGCCTCTACAATTTGGTAACCTATTTAAGCGATTCTCCTaGCTTAGCCTCCTGAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: TTATTYHHQRKPLQFGNLFKRFS*LSLLSS Trigger: GCTACTCAGGAGGCTAAGGCAGGAGAATCGCTTAAA...TAGGTTACCAAATTGTAGAGGCTTTCGTTGGTGGTGGTAAGTGGTAGCGGTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| 3UTR CAA 90 bp | GGCTCTCTCTTTAAAACCTCTACTGCATTCCTCTTGCCATATGTATaGGATCCCACGTTGGTAGATGAGAGAATGGCACCAAAGTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: GSLFKTSTAFLLPYV*DPTLVDERMAPKLL Trigger: CAACAACTTTGGTGCCATTCTCTCATCTACCAACGTGGGATCCAATACATATGGCAAGAGGAATGCAGTAGAGGTTTTAAAGAGAGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542023.1 |
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| 3UTR-3UTR TCA 90 bp | ACTACCGCTACCACTTACCACCACCAACGAAAGCCTCTACAATTTGGTAACCTATTAAACCTGTGCCACTaGGATATAGGTCCCAAAATG | + |
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Preference number: 2 (lower is better) Translates to: TTATTYHHQRKPLQFGNLLNLCH*DIGPKM Trigger: CATTTTGGGACCTATATCTCAGTGGCACAGGTTTAA...TAGGTTACCAAATTGTAGAGGCTTTCGTTGGTGGTGGTAAGTGGTAGCGGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| 3UTR-3UTR TCA 90 bp | GCCACCGCGCCTGGTCCAATTACTGATTTTCTCATGTCAAGAATAACTTCATTATCCCACGTTGGTAGATaGGAGAATGGCACCAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: ATAPGPITDFLMSRITSLSHVGR*ENGTKV Trigger: AACTTTGGTGCCATTCTCTCATCTACCAACGTGGGA...TAATGAAGTTATTCTTGACATGAGAAAATCAGTAATTGGACCAGGCGCGGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542023.1 |
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| 3UTR-3UTR TCA 90 bp | GGCAGTTTATCTGAATTAATGCTACTTCCAAAGCTACCTAACTCAAAGTCAGGGATGACTGAGGTTTGCTaGAAGCCACTTAAACAAAAT | + |
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Preference number: 2 (lower is better) Translates to: GSLSELMLLPKLPNSKSGMTEVC*KPLKQN Trigger: ATTTTGTTTAAGTGGCTTTCAGCAAACCTCAGTCAT...CCCTGACTTTGAGTTAGGTAGCTTTGGAAGTAGCATTAATTCAGATAAACTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| 3UTR-3UTR TCA 90 bp | CAAAGTCAGGGAAAAGCAGATATTCATAAGAATCTGACTCAAAGCAAAGCATTTGCTGCTAACACACAATaGAACCCTCATGGATACAAA | + |
|
Preference number: 2 (lower is better) Translates to: QSQGKADIHKNLTQSKAFAANTQ*NPHGYK Trigger: TTTGTATCCATGAGGGTTTCATTGTGTGTTAGCAGC...AAATGCTTTGCTTTGAGTCAGATTCTTATGAATATCTGCTTTTCCCTGACTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| 3UTR-3UTR GCA 90 bp | CAAAGTCAGGGAAAAGCAGATATTCATAAGAATCTGACTCAAAGCAAAGCATTTCTACTGCATTCCTCTTaGCATATGTATTGGATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: QSQGKADIHKNLTQSKAFLLHSS*HMYWIP Trigger: TGGGATCCAATACATATGGCAAGAGGAATGCAGTAG...AAATGCTTTGCTTTGAGTCAGATTCTTATGAATATCTGCTTTTCCCTGACTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542023.1 |
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| 3UTR-3UTR TCA 90 bp | AGCATTCTGTCATTTCAGAAATATACTGCAAAAAGGAATTGCTTAACAGGGGTAGCCTGGTCCAATTACTaGTTTTCTCATGTCAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: SILSFQKYTAKRNCLTGVAWSNY*FSHVKN Trigger: ATTCTTGACATGAGAAAATCAGTAATTGGACCAGGC...TACCCCTGTTAAGCAATTCCTTTTTGCAGTATATTTCTGAAATGACAGAATGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| 3UTR-3UTR CAA 90 bp | AATAGAAGCTCACTGCTGCTAACACACAATGAAACCCTCATGGATACAAAGCAGTCTACTGCATTCCTCTaGCCATATGTATTGGATCCC | + |
|
Preference number: 3 (lower is better) Translates to: NRSSLLLTHNETLMDTKQSTAFL*PYVLDP Trigger: GGGATCCAATACATATGGCAAGAGGAATGCAGTAGA...CTGCTTTGTATCCATGAGGGTTTCATTGTGTGTTAGCAGCAGTGAGCTTCTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542023.1 |
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| 3UTR-3UTR CAA 90 bp | ACTACCGCTACCACTTACCACCACCAACGAAAGCCTCTACAATTTGGTAACCTATTAATAGAACACAAGTaGTTTCGCAATACCCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: TTATTYHHQRKPLQFGNLLIEHK*FRNTLH Trigger: ATGCAGGGTATTGCGAAACAACTTGTGTTCTATTAA...TAGGTTACCAAATTGTAGAGGCTTTCGTTGGTGGTGGTAAGTGGTAGCGGTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| 3UTR-3UTR CAA 90 bp | AAACAATCTTTTGAGAAGGTATATGTCCTAGCAACAAACATCAGACACACAGACCTCTTGCCATATGTATaGGATCCCACGTTGGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: KQSFEKVYVLATNIRHTDLLPYV*DPTLVD Trigger: ATCTACCAACGTGGGATCCAATACATATGGCAAGAG...GTCTGTGTGTCTGATGTTTGTTGCTAGGACATATACCTTCTCAAAAGATTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542023.1 |
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| CDS-3UTR TCA 90 bp | ACTACCGCTACCACTTACCACCACCAACGAAAGCCTCTACAATTTGGTAACCTACTGGTCTCGAACTCCTaGCCTTGTGATCTGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TTATTYHHQRKPLQFGNLLVSNS*PCDLPA Trigger: GGCAGGCAGATCACAAGGTCAGGAGTTCGAGACCAG...TAGGTTACCAAATTGTAGAGGCTTTCGTTGGTGGTGGTAAGTGGTAGCGGTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR TCA 90 bp | GGCAGTTTATCTGAATTAATGCTACTTCCAAAGCTACCTAACTCAAAGTCAGGGCTGGTCTCGAACTCCTaGCCTTGTGATCTGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GSLSELMLLPKLPNSKSGLVSNS*PCDLPA Trigger: GGCAGGCAGATCACAAGGTCAGGAGTTCGAGACCAG...CCCTGACTTTGAGTTAGGTAGCTTTGGAAGTAGCATTAATTCAGATAAACTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR GCA 90 bp | AGAGCCACCGCGCCTGGTCCAATTACTGATTTTCTCATGTCAAGAATAACTTCAAAATTTGCCAGGCGCTaGGTTGCACATGTGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RATAPGPITDFLMSRITSKFARR*VAHVAV Trigger: CACTGCCACATGTGCAACGCAGCGCCTGGCAAATTT...TGAAGTTATTCTTGACATGAGAAAATCAGTAATTGGACCAGGCGCGGTGGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR CCA 90 bp | AAAACCTCTACTGCATTCCTCTTGCCATATGTATTGGATCCCACGTTGGTAGATGCTGCGTTGCACATGTaGCAGTGTTGCATTTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KTSTAFLLPYVLDPTLVDAALHM*QCCISA Trigger: AGCGGAAATGCAACACTGCCACATGTGCAACGCAGC...ATCTACCAACGTGGGATCCAATACATATGGCAAGAGGAATGCAGTAGAGGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542023.1 |
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| CDS-3UTR CCA 90 bp | GGCAGTTTATCTGAATTAATGCTACTTCCAAAGCTACCTAACTCAAAGTCAGGGGCTGCGTTGCACATGTaGCAGTGTTGCATTTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSLSELMLLPKLPNSKSGAALHM*QCCISA Trigger: AGCGGAAATGCAACACTGCCACATGTGCAACGCAGC...CCCTGACTTTGAGTTAGGTAGCTTTGGAAGTAGCATTAATTCAGATAAACTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| 3UTR CAA 72 bp | ACTGCATTCCTCTTGCCATATGTATTGGATCCCACGTaGGTAGATGAGAGAATGGCACCAAAGTTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAFLLPYVLDPT*VDERMAPKLLL Trigger: CAGCAACAACTTTGGTGCCATTCTCTCATCTACCAACGTGGGATCCAATACATATGGCAAGAGGAATGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542023.1 |
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| CDS-3UTR CCA 90 bp | GGCAGTTTATCTGAATTAATGCTACTTCCAAAGCTACCTAACTCAAAGTCAGGGTCCCGCTTCATGTTCTaGCTTTGCCCCTCTAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSLSELMLLPKLPNSKSGSRFMF*LCPSKF Trigger: GAACTTAGAGGGGCAAAGCCAGAACATGAAGCGGGA...CCCTGACTTTGAGTTAGGTAGCTTTGGAAGTAGCATTAATTCAGATAAACTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542023.1 |
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| 3UTR CAA 72 bp | AGTGGCTCTCTCTTTAAAACCTCTACTGCATTCCTCTaGCCATATGTATTGGATCCCACGTTGGTAGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGSLFKTSTAFL*PYVLDPTLVDE Trigger: CTCATCTACCAACGTGGGATCCAATACATATGGCAAGAGGAATGCAGTAGAGGTTTTAAAGAGAGAGCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542023.1 |
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| CDS-3UTR TCA 90 bp | TTGCCATATGTATTGGATCCCACGTTGGTAGATGAGAGAATGGCACCAAAGTTGCAACAGAGAGCACAATaGGAAATACTTGCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPYVLDPTLVDERMAPKLQQRAQ*EILAAS Trigger: TGAAGCTGCAAGTATTTCTCATTGTGCTCTCTGTTG...CAACTTTGGTGCCATTCTCTCATCTACCAACGTGGGATCCAATACATATGGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542023.1 |
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| CDS-3UTR TCA 90 bp | AATAGAAGCTCACTGCTGCTAACACACAATGAAACCCTCATGGATACAAAGCAGCCCTGCATAAGAATATaGCTGAGGTTTGCTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NRSSLLLTHNETLMDTKQPCIRI*LRFAES Trigger: GCTTTCAGCAAACCTCAGTCATATTCTTATGCAGGG...CTGCTTTGTATCCATGAGGGTTTCATTGTGTGTTAGCAGCAGTGAGCTTCTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR GCA 90 bp | ACTACCGCTACCACTTACCACCACCAACGAAAGCCTCTACAATTTGGTAACCTAACAATGAGAAATACTTaGAGCTTCAGGATGCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TTATTYHHQRKPLQFGNLTMRNT*SFRMPI Trigger: AATGGGCATCCTGAAGCTGCAAGTATTTCTCATTGT...TAGGTTACCAAATTGTAGAGGCTTTCGTTGGTGGTGGTAAGTGGTAGCGGTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR GCA 90 bp | AAAACCTCTACTGCATTCCTCTTGCCATATGTATTGGATCCCACGTTGGTAGATTTCATGTTCTGGCTTTaGCCCTCTAAGTTCCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: KTSTAFLLPYVLDPTLVDFMFWL*PSKFQE Trigger: CTCTTGGAACTTAGAGGGGCAAAGCCAGAACATGAA...ATCTACCAACGTGGGATCCAATACATATGGCAAGAGGAATGCAGTAGAGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542023.1 |
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| CDS-3UTR CCA 90 bp | AAACAATCTTTTGAGAAGGTATATGTCCTAGCAACAAACATCAGACACACAGACGCTGCGTTGCACATGTaGCAGTGTTGCATTTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: KQSFEKVYVLATNIRHTDAALHM*QCCISA Trigger: AGCGGAAATGCAACACTGCCACATGTGCAACGCAGC...GTCTGTGTGTCTGATGTTTGTTGCTAGGACATATACCTTCTCAAAAGATTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000240652.8 ENST00000535428.1 ENST00000542023.1 |
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| 3UTR CAA 72 bp | TTTAAAACCTCTACTGCATTCCTCTTGCCATATGTATaGGATCCCACGTTGGTAGATGAGAGAATGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FKTSTAFLLPYV*DPTLVDERMAP Trigger: TGGTGCCATTCTCTCATCTACCAACGTGGGATCCAATACATATGGCAAGAGGAATGCAGTAGAGGTTTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542023.1 |
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| CDS-3UTR TCA 90 bp | AAAACCTCTACTGCATTCCTCTTGCCATATGTATTGGATCCCACGTTGGTAGATGCTGCTAACACACAATaGAACCCTCATGGATACAAA | + |
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Preference number: 4 (lower is better) Translates to: KTSTAFLLPYVLDPTLVDAANTQ*NPHGYK Trigger: TTTGTATCCATGAGGGTTTCATTGTGTGTTAGCAGC...ATCTACCAACGTGGGATCCAATACATATGGCAAGAGGAATGCAGTAGAGGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542023.1 |
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| CDS-3UTR GCA 90 bp | TATAGAGTTACATTGTCCTCTAAAGGGGCAAGTAATTCAGTGGCTCTCTCTTTACACATGTGGCAGTGTTaGATTTCCGCTTTTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: YRVTLSSKGASNSVALSLHMWQC*ISAFPP Trigger: AGGTGGAAAAGCGGAAATGCAACACTGCCACATGTG...TAAAGAGAGAGCCACTGAATTACTTGCCCCTTTAGAGGACAATGTAACTCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542023.1 |
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| CDS-3UTR GCA 90 bp | CCATATATTCACACTGGAGATGAAAAGGGCACTGTTAAATTATACAGGAAATCAAAATTTGCCAGGCGCTaGGTTGCACATGTGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: PYIHTGDEKGTVKLYRKSKFARR*VAHVAV Trigger: CACTGCCACATGTGCAACGCAGCGCCTGGCAAATTT...TGATTTCCTGTATAATTTAACAGTGCCCTTTTCATCTCCAGTGTGAATATATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000240652.8 ENST00000535428.1 ENST00000542023.1 |
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| CDS-3UTR GCA 90 bp | AATAGAAGCTCACTGCTGCTAACACACAATGAAACCCTCATGGATACAAAGCAGCTACTGCATTCCTCTTaGCATATGTATTGGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: NRSSLLLTHNETLMDTKQLLHSS*HMYWIP Trigger: TGGGATCCAATACATATGGCAAGAGGAATGCAGTAG...CTGCTTTGTATCCATGAGGGTTTCATTGTGTGTTAGCAGCAGTGAGCTTCTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR TCA 90 bp | GGCAGTTTATCTGAATTAATGCTACTTCCAAAGCTACCTAACTCAAAGTCAGGGCAACAGAGAGCACAATaGGAAATACTTGCAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GSLSELMLLPKLPNSKSGQQRAQ*EILAAS Trigger: TGAAGCTGCAAGTATTTCTCATTGTGCTCTCTGTTG...CCCTGACTTTGAGTTAGGTAGCTTTGGAAGTAGCATTAATTCAGATAAACTGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR TCA 90 bp | AAACAATCTTTTGAGAAGGTATATGTCCTAGCAACAAACATCAGACACACAGACTCCCACGTTGGTAGATaGGAGAATGGCACCAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: KQSFEKVYVLATNIRHTDSHVGR*ENGTKV Trigger: AACTTTGGTGCCATTCTCTCATCTACCAACGTGGGA...GTCTGTGTGTCTGATGTTTGTTGCTAGGACATATACCTTCTCAAAAGATTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000240652.8 ENST00000535428.1 ENST00000542023.1 |
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| CDS-3UTR GCA 90 bp | GGCAGTTTATCTGAATTAATGCTACTTCCAAAGCTACCTAACTCAAAGTCAGGGCTACTGCATTCCTCTTaGCATATGTATTGGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: GSLSELMLLPKLPNSKSGLLHSS*HMYWIP Trigger: TGGGATCCAATACATATGGCAAGAGGAATGCAGTAG...CCCTGACTTTGAGTTAGGTAGCTTTGGAAGTAGCATTAATTCAGATAAACTGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR CCA 90 bp | CAATCTTTTGAGAAGGTATATGTCCTAGCAACAAACATCAGACACACAGACCATGGTGTAGCTTTCAGATaGTTCAATGCAACAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: QSFEKVYVLATNIRHTDHGVAFR*FNATES Trigger: GCTCTCTGTTGCATTGAACCATCTGAAAGCTACACC...ATGGTCTGTGTGTCTGATGTTTGTTGCTAGGACATATACCTTCTCAAAAGATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR TCA 90 bp | GGCAGTTTATCTGAATTAATGCTACTTCCAAAGCTACCTAACTCAAAGTCAGGGGCCTGGTCCAATTACTaGTTTTCTCATGTCAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: GSLSELMLLPKLPNSKSGAWSNY*FSHVKN Trigger: ATTCTTGACATGAGAAAATCAGTAATTGGACCAGGC...CCCTGACTTTGAGTTAGGTAGCTTTGGAAGTAGCATTAATTCAGATAAACTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR TCA 90 bp | CAATCTTTTGAGAAGGTATATGTCCTAGCAACAAACATCAGACACACAGACCATGCTGCTAACACACAATaGAACCCTCATGGATACAAA | + |
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Preference number: 4 (lower is better) Translates to: QSFEKVYVLATNIRHTDHAANTQ*NPHGYK Trigger: TTTGTATCCATGAGGGTTTCATTGTGTGTTAGCAGC...ATGGTCTGTGTGTCTGATGTTTGTTGCTAGGACATATACCTTCTCAAAAGATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR GCA 90 bp | AGAGCCACCGCGCCTGGTCCAATTACTGATTTTCTCATGTCAAGAATAACTTCACTTCAGGATGCCCATTaGTTCTCAAATTTTCTTTTA | + |
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Preference number: 4 (lower is better) Translates to: RATAPGPITDFLMSRITSLQDAH*FSNFLL Trigger: TAAAAGAAAATTTGAGAAGCAATGGGCATCCTGAAG...TGAAGTTATTCTTGACATGAGAAAATCAGTAATTGGACCAGGCGCGGTGGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR GCA 90 bp | CAATCTTTTGAGAAGGTATATGTCCTAGCAACAAACATCAGACACACAGACCATCTTGCAGCTTCAGGATaGCCATTGCTTCTCAAATTT | + |
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Preference number: 4 (lower is better) Translates to: QSFEKVYVLATNIRHTDHLAASG*PLLLKF Trigger: AAATTTGAGAAGCAATGGGCATCCTGAAGCTGCAAG...ATGGTCTGTGTGTCTGATGTTTGTTGCTAGGACATATACCTTCTCAAAAGATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR GCA 90 bp | AGCATTCTGTCATTTCAGAAATATACTGCAAAAAGGAATTGCTTAACAGGGGTACACATGTGGCAGTGTTaGATTTCCGCTTTTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: SILSFQKYTAKRNCLTGVHMWQC*ISAFPP Trigger: AGGTGGAAAAGCGGAAATGCAACACTGCCACATGTG...TACCCCTGTTAAGCAATTCCTTTTTGCAGTATATTTCTGAAATGACAGAATGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR GCA 90 bp | CCATATATTCACACTGGAGATGAAAAGGGCACTGTTAAATTATACAGGAAATCACACATGTGGCAGTGTTaGATTTCCGCTTTTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: PYIHTGDEKGTVKLYRKSHMWQC*ISAFPP Trigger: AGGTGGAAAAGCGGAAATGCAACACTGCCACATGTG...TGATTTCCTGTATAATTTAACAGTGCCCTTTTCATCTCCAGTGTGAATATATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000240652.8 ENST00000535428.1 ENST00000542023.1 |
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| CDS-3UTR GCA 90 bp | AGCATTCTGTCATTTCAGAAATATACTGCAAAAAGGAATTGCTTAACAGGGGTATTTAAGCGATTCTCCTaGCTTAGCCTCCTGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SILSFQKYTAKRNCLTGVFKRFS*LSLLSS Trigger: GCTACTCAGGAGGCTAAGGCAGGAGAATCGCTTAAA...TACCCCTGTTAAGCAATTCCTTTTTGCAGTATATTTCTGAAATGACAGAATGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR GCA 90 bp | CCATATATTCACACTGGAGATGAAAAGGGCACTGTTAAATTATACAGGAAATCATTTAAGCGATTCTCCTaGCTTAGCCTCCTGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: PYIHTGDEKGTVKLYRKSFKRFS*LSLLSS Trigger: GCTACTCAGGAGGCTAAGGCAGGAGAATCGCTTAAA...TGATTTCCTGTATAATTTAACAGTGCCCTTTTCATCTCCAGTGTGAATATATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR GCA 90 bp | AGAGCCACCGCGCCTGGTCCAATTACTGATTTTCTCATGTCAAGAATAACTTCAATAAATATATTTCCCTaGCTCTATACACTCACTACC | + |
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Preference number: 4 (lower is better) Translates to: RATAPGPITDFLMSRITSINIFP*LYTLTT Trigger: GGTAGTGAGTGTATAGAGGCAGGGAAATATATTTAT...TGAAGTTATTCTTGACATGAGAAAATCAGTAATTGGACCAGGCGCGGTGGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR TCA 90 bp | CAAAGTCAGGGAAAAGCAGATATTCATAAGAATCTGACTCAAAGCAAAGCATTTCCCTGCATAAGAATATaGCTGAGGTTTGCTGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: QSQGKADIHKNLTQSKAFPCIRI*LRFAES Trigger: GCTTTCAGCAAACCTCAGTCATATTCTTATGCAGGG...AAATGCTTTGCTTTGAGTCAGATTCTTATGAATATCTGCTTTTCCCTGACTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR GCA 90 bp | AAACAATCTTTTGAGAAGGTATATGTCCTAGCAACAAACATCAGACACACAGACCTACTGCATTCCTCTTaGCATATGTATTGGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: KQSFEKVYVLATNIRHTDLLHSS*HMYWIP Trigger: TGGGATCCAATACATATGGCAAGAGGAATGCAGTAG...GTCTGTGTGTCTGATGTTTGTTGCTAGGACATATACCTTCTCAAAAGATTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000240652.8 ENST00000535428.1 ENST00000542023.1 |
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| CDS-3UTR CCA 90 bp | AGCATTCTGTCATTTCAGAAATATACTGCAAAAAGGAATTGCTTAACAGGGGTAGGTGTAGCTTTCAGATaGTTCAATGCAACAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SILSFQKYTAKRNCLTGVGVAFR*FNATES Trigger: GCTCTCTGTTGCATTGAACCATCTGAAAGCTACACC...TACCCCTGTTAAGCAATTCCTTTTTGCAGTATATTTCTGAAATGACAGAATGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR TCA 90 bp | CCATATATTCACACTGGAGATGAAAAGGGCACTGTTAAATTATACAGGAAATCATTAAACCTGTGCCACTaGGATATAGGTCCCAAAATG | + |
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Preference number: 4 (lower is better) Translates to: PYIHTGDEKGTVKLYRKSLNLCH*DIGPKM Trigger: CATTTTGGGACCTATATCTCAGTGGCACAGGTTTAA...TGATTTCCTGTATAATTTAACAGTGCCCTTTTCATCTCCAGTGTGAATATATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR GCA 90 bp | GGCAGTTTATCTGAATTAATGCTACTTCCAAAGCTACCTAACTCAAAGTCAGGGATAAATATATTTCCCTaGCTCTATACACTCACTACC | + |
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Preference number: 4 (lower is better) Translates to: GSLSELMLLPKLPNSKSGINIFP*LYTLTT Trigger: GGTAGTGAGTGTATAGAGGCAGGGAAATATATTTAT...CCCTGACTTTGAGTTAGGTAGCTTTGGAAGTAGCATTAATTCAGATAAACTGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR GCA 90 bp | CAATCTTTTGAGAAGGTATATGTCCTAGCAACAAACATCAGACACACAGACCATCTTCAGGATGCCCATTaGTTCTCAAATTTTCTTTTA | + |
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Preference number: 4 (lower is better) Translates to: QSFEKVYVLATNIRHTDHLQDAH*FSNFLL Trigger: TAAAAGAAAATTTGAGAAGCAATGGGCATCCTGAAG...ATGGTCTGTGTGTCTGATGTTTGTTGCTAGGACATATACCTTCTCAAAAGATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR GCA 90 bp | AGCATTCTGTCATTTCAGAAATATACTGCAAAAAGGAATTGCTTAACAGGGGTAACAATGAGAAATACTTaGAGCTTCAGGATGCCCATT | + |
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Preference number: 4 (lower is better) Translates to: SILSFQKYTAKRNCLTGVTMRNT*SFRMPI Trigger: AATGGGCATCCTGAAGCTGCAAGTATTTCTCATTGT...TACCCCTGTTAAGCAATTCCTTTTTGCAGTATATTTCTGAAATGACAGAATGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR TCA 90 bp | CAAAGTCAGGGAAAAGCAGATATTCATAAGAATCTGACTCAAAGCAAAGCATTTATGACTGAGGTTTGCTaGAAGCCACTTAAACAAAAT | + |
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Preference number: 4 (lower is better) Translates to: QSQGKADIHKNLTQSKAFMTEVC*KPLKQN Trigger: ATTTTGTTTAAGTGGCTTTCAGCAAACCTCAGTCAT...AAATGCTTTGCTTTGAGTCAGATTCTTATGAATATCTGCTTTTCCCTGACTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR CAA 90 bp | AAAACCTCTACTGCATTCCTCTTGCCATATGTATTGGATCCCACGTTGGTAGATGCACATGTGGCAGTGTaGCATTTCCGCTTTTCCACC | + |
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Preference number: 5 (lower is better) Translates to: KTSTAFLLPYVLDPTLVDAHVAV*HFRFST Trigger: GGTGGAAAAGCGGAAATGCAACACTGCCACATGTGC...ATCTACCAACGTGGGATCCAATACATATGGCAAGAGGAATGCAGTAGAGGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542023.1 |
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| CDS-3UTR CAA 90 bp | ACTACCGCTACCACTTACCACCACCAACGAAAGCCTCTACAATTTGGTAACCTACTCTTGCCATATGTATaGGATCCCACGTTGGTAGAT | + |
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Preference number: 5 (lower is better) Translates to: TTATTYHHQRKPLQFGNLLLPYV*DPTLVD Trigger: ATCTACCAACGTGGGATCCAATACATATGGCAAGAG...TAGGTTACCAAATTGTAGAGGCTTTCGTTGGTGGTGGTAAGTGGTAGCGGTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR CAA 90 bp | ACTACCGCTACCACTTACCACCACCAACGAAAGCCTCTACAATTTGGTAACCTAGCTTCAGGATGCCCATaGCTTCTCAAATTTTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: TTATTYHHQRKPLQFGNLASGCP*LLKFSF Trigger: AAAAGAAAATTTGAGAAGCAATGGGCATCCTGAAGC...TAGGTTACCAAATTGTAGAGGCTTTCGTTGGTGGTGGTAAGTGGTAGCGGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR CAA 90 bp | GCCACCGCGCCTGGTCCAATTACTGATTTTCTCATGTCAAGAATAACTTCATTACACAATGAGAAATACTaGCAGCTTCAGGATGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: ATAPGPITDFLMSRITSLHNEKY*QLQDAH Trigger: ATGGGCATCCTGAAGCTGCAAGTATTTCTCATTGTG...TAATGAAGTTATTCTTGACATGAGAAAATCAGTAATTGGACCAGGCGCGGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR CAA 90 bp | AAACAATCTTTTGAGAAGGTATATGTCCTAGCAACAAACATCAGACACACAGACGCACATGTGGCAGTGTaGCATTTCCGCTTTTCCACC | + |
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Preference number: 5 (lower is better) Translates to: KQSFEKVYVLATNIRHTDAHVAV*HFRFST Trigger: GGTGGAAAAGCGGAAATGCAACACTGCCACATGTGC...GTCTGTGTGTCTGATGTTTGTTGCTAGGACATATACCTTCTCAAAAGATTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000240652.8 ENST00000535428.1 ENST00000542023.1 |
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| CDS-3UTR CAA 90 bp | GCCACCGCGCCTGGTCCAATTACTGATTTTCTCATGTCAAGAATAACTTCATTATCTACTGCATTCCTCTaGCCATATGTATTGGATCCC | + |
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Preference number: 5 (lower is better) Translates to: ATAPGPITDFLMSRITSLSTAFL*PYVLDP Trigger: GGGATCCAATACATATGGCAAGAGGAATGCAGTAGA...TAATGAAGTTATTCTTGACATGAGAAAATCAGTAATTGGACCAGGCGCGGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR CAA 90 bp | AGAGCCACCGCGCCTGGTCCAATTACTGATTTTCTCATGTCAAGAATAACTTCAGCTTCAGGATGCCCATaGCTTCTCAAATTTTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: RATAPGPITDFLMSRITSASGCP*LLKFSF Trigger: AAAAGAAAATTTGAGAAGCAATGGGCATCCTGAAGC...TGAAGTTATTCTTGACATGAGAAAATCAGTAATTGGACCAGGCGCGGTGGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR CAA 90 bp | CCATATATTCACACTGGAGATGAAAAGGGCACTGTTAAATTATACAGGAAATCAGCACATGTGGCAGTGTaGCATTTCCGCTTTTCCACC | + |
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Preference number: 5 (lower is better) Translates to: PYIHTGDEKGTVKLYRKSAHVAV*HFRFST Trigger: GGTGGAAAAGCGGAAATGCAACACTGCCACATGTGC...TGATTTCCTGTATAATTTAACAGTGCCCTTTTCATCTCCAGTGTGAATATATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000240652.8 ENST00000535428.1 ENST00000542023.1 |
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| CDS-3UTR CAA 90 bp | CAATCTTTTGAGAAGGTATATGTCCTAGCAACAAACATCAGACACACAGACCATGTATTGGATCCCACGTaGGTAGATGAGAGAATGGCA | + |
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Preference number: 5 (lower is better) Translates to: QSFEKVYVLATNIRHTDHVLDPT*VDERMA Trigger: TGCCATTCTCTCATCTACCAACGTGGGATCCAATAC...ATGGTCTGTGTGTCTGATGTTTGTTGCTAGGACATATACCTTCTCAAAAGATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000240652.8 ENST00000535428.1 ENST00000542023.1 |
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| CDS-3UTR CAA 90 bp | TTGCCATATGTATTGGATCCCACGTTGGTAGATGAGAGAATGGCACCAAAGTTGAACTATAGAGTTACATaGTCCTCTAAAGGGGCAAGT | + |
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Preference number: 5 (lower is better) Translates to: LPYVLDPTLVDERMAPKLNYRVT*SSKGAS Trigger: ACTTGCCCCTTTAGAGGACAATGTAACTCTATAGTT...CAACTTTGGTGCCATTCTCTCATCTACCAACGTGGGATCCAATACATATGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542023.1 |
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| CDS GCA 90 bp | GCTTTCAGATGGTTCAATGCAACAGAGAGCACAATGAGAAATACTTaGAGCTTCAGGATGCCCATTGCTTCTCAAATTTTCTGGAAATGT | + |
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Preference number: 5 (lower is better) Translates to: AFRWFNATESTMRNT*SFRMPIASQIFWKC Trigger: ACATTTCCAGAAAATTTGAGAAGCAATGGGCATCCTGAAGCTGCAAGTATTTCTCATTGTGCTCTCTGTTGCATTGAACCATCTGAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539393.5 |
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| CDS-3UTR CAA 90 bp | AAACAATCTTTTGAGAAGGTATATGTCCTAGCAACAAACATCAGACACACAGACGTATTGGATCCCACGTaGGTAGATGAGAGAATGGCA | + |
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Preference number: 5 (lower is better) Translates to: KQSFEKVYVLATNIRHTDVLDPT*VDERMA Trigger: TGCCATTCTCTCATCTACCAACGTGGGATCCAATAC...GTCTGTGTGTCTGATGTTTGTTGCTAGGACATATACCTTCTCAAAAGATTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000240652.8 ENST00000535428.1 ENST00000542023.1 |
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| CDS-3UTR CAA 90 bp | CAATCTTTTGAGAAGGTATATGTCCTAGCAACAAACATCAGACACACAGACCATTCTACTGCATTCCTCTaGCCATATGTATTGGATCCC | + |
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Preference number: 5 (lower is better) Translates to: QSFEKVYVLATNIRHTDHSTAFL*PYVLDP Trigger: GGGATCCAATACATATGGCAAGAGGAATGCAGTAGA...ATGGTCTGTGTGTCTGATGTTTGTTGCTAGGACATATACCTTCTCAAAAGATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000240652.8 ENST00000535428.1 ENST00000542023.1 |
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| CDS-3UTR CAA 90 bp | GCCACCGCGCCTGGTCCAATTACTGATTTTCTCATGTCAAGAATAACTTCATTAGAAAAGAGTCCAAGCTaGTATCCACTGGAATATTTA | + |
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Preference number: 5 (lower is better) Translates to: ATAPGPITDFLMSRITSLEKSPS*YPLEYL Trigger: TAAATATTCCAGTGGATACAAGCTTGGACTCTTTTC...TAATGAAGTTATTCTTGACATGAGAAAATCAGTAATTGGACCAGGCGCGGTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000240652.8 |
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| CDS-3UTR CAA 90 bp | AGCATTCTGTCATTTCAGAAATATACTGCAAAAAGGAATTGCTTAACAGGGGTAGTATTGGATCCCACGTaGGTAGATGAGAGAATGGCA | + |
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Preference number: 5 (lower is better) Translates to: SILSFQKYTAKRNCLTGVVLDPT*VDERMA Trigger: TGCCATTCTCTCATCTACCAACGTGGGATCCAATAC...TACCCCTGTTAAGCAATTCCTTTTTGCAGTATATTTCTGAAATGACAGAATGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR CAA 90 bp | CCATATATTCACACTGGAGATGAAAAGGGCACTGTTAAATTATACAGGAAATCACACAATGAGAAATACTaGCAGCTTCAGGATGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: PYIHTGDEKGTVKLYRKSHNEKY*QLQDAH Trigger: ATGGGCATCCTGAAGCTGCAAGTATTTCTCATTGTG...TGATTTCCTGTATAATTTAACAGTGCCCTTTTCATCTCCAGTGTGAATATATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR CAA 90 bp | AGCATTCTGTCATTTCAGAAATATACTGCAAAAAGGAATTGCTTAACAGGGGTACTCTTGCCATATGTATaGGATCCCACGTTGGTAGAT | + |
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Preference number: 5 (lower is better) Translates to: SILSFQKYTAKRNCLTGVLLPYV*DPTLVD Trigger: ATCTACCAACGTGGGATCCAATACATATGGCAAGAG...TACCCCTGTTAAGCAATTCCTTTTTGCAGTATATTTCTGAAATGACAGAATGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR CAA 90 bp | CCATATATTCACACTGGAGATGAAAAGGGCACTGTTAAATTATACAGGAAATCATCTACTGCATTCCTCTaGCCATATGTATTGGATCCC | + |
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Preference number: 5 (lower is better) Translates to: PYIHTGDEKGTVKLYRKSSTAFL*PYVLDP Trigger: GGGATCCAATACATATGGCAAGAGGAATGCAGTAGA...TGATTTCCTGTATAATTTAACAGTGCCCTTTTCATCTCCAGTGTGAATATATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000240652.8 ENST00000535428.1 ENST00000542023.1 |
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| CDS-3UTR CAA 90 bp | AAACAATCTTTTGAGAAGGTATATGTCCTAGCAACAAACATCAGACACACAGACAACTATAGAGTTACATaGTCCTCTAAAGGGGCAAGT | + |
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Preference number: 5 (lower is better) Translates to: KQSFEKVYVLATNIRHTDNYRVT*SSKGAS Trigger: ACTTGCCCCTTTAGAGGACAATGTAACTCTATAGTT...GTCTGTGTGTCTGATGTTTGTTGCTAGGACATATACCTTCTCAAAAGATTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000240652.8 ENST00000535428.1 ENST00000542023.1 |
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| CDS-3UTR CAA 90 bp | CAAAGTCAGGGAAAAGCAGATATTCATAAGAATCTGACTCAAAGCAAAGCATTTAACTATAGAGTTACATaGTCCTCTAAAGGGGCAAGT | + |
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Preference number: 5 (lower is better) Translates to: QSQGKADIHKNLTQSKAFNYRVT*SSKGAS Trigger: ACTTGCCCCTTTAGAGGACAATGTAACTCTATAGTT...AAATGCTTTGCTTTGAGTCAGATTCTTATGAATATCTGCTTTTCCCTGACTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS-3UTR CAA 90 bp | AAACAATCTTTTGAGAAGGTATATGTCCTAGCAACAAACATCAGACACACAGACTTAATAGAACACAAGTaGTTTCGCAATACCCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: KQSFEKVYVLATNIRHTDLIEHK*FRNTLH Trigger: ATGCAGGGTATTGCGAAACAACTTGTGTTCTATTAA...GTCTGTGTGTCTGATGTTTGTTGCTAGGACATATACCTTCTCAAAAGATTGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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| CDS GCA 72 bp | AATTTGCCAGGCGCTGCGTTGCACATGTGGCAGTGTTaGATTTCCGCTTTTCCACCTGATGACTTTCAATGG | + |
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Preference number: 6 (lower is better) Translates to: NLPGAALHMWQC*ISAFPPDDFQW Trigger: CCATTGAAAGTCATCAGGTGGAAAAGCGGAAATGCAACACTGCCACATGTGCAACGCAGCGCCTGGCAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000240652.8 ENST00000537593.1 ENST00000539393.5 |
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| CDS GCA 72 bp | AATTTGCCAGGCGCTGCGTTGCACATGTGGCAGTGTTaGATTTCCGCTTTTCCACCTGATGATTTTCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: NLPGAALHMWQC*ISAFPPDDFLE Trigger: TTCAAGAAAATCATCAGGTGGAAAAGCGGAAATGCAACACTGCCACATGTGCAACGCAGCGCCTGGCAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535428.1 |
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| CDS TCA 72 bp | CCTCTTGCCATATGTATTGGATCCCACGTTGGTAGATaGGAGAATGGCACCAAAGTTGTTGCTGGAATGAAC | + |
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Preference number: 6 (lower is better) Translates to: PLAICIGSHVGR*ENGTKVVAGMN Trigger: GTTCATTCCAGCAACAACTTTGGTGCCATTCTCTCATCTACCAACGTGGGATCCAATACATATGGCAAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000240652.8 ENST00000535428.1 ENST00000537593.1 ENST00000539393.5 ENST00000542023.1 |
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| CDS CAA 90 bp | AGCTTTCAGATGGTTCAATGCAACAGAGAGCACAATGAGAAATACTaGCAGCTTCAGGATGCCCATTGCTTCTCAAATTTTCTGGAAATG | + |
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Preference number: 6 (lower is better) Translates to: SFQMVQCNREHNEKY*QLQDAHCFSNFLEM Trigger: CATTTCCAGAAAATTTGAGAAGCAATGGGCATCCTGAAGCTGCAAGTATTTCTCATTGTGCTCTCTGTTGCATTGAACCATCTGAAAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539393.5 |
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| CDS CAA 90 bp | AGCTTTCAGATGGTTCAATGCAACAGAGAGCACAATGAGAAATACTaGCAGCTTCAGGATGCCCATTGCTTCTCAAATTTTCTGCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SFQMVQCNREHNEKY*QLQDAHCFSNFLQR Trigger: TCTTTGCAGAAAATTTGAGAAGCAATGGGCATCCTGAAGCTGCAAGTATTTCTCATTGTGCTCTCTGTTGCATTGAACCATCTGAAAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537593.1 |
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| CDS CCA 72 bp | ATCCATTCCTGTCTTTCAATGGGTGTAGCTTTCAGATaGTTCAATGCAACAGAGAGCACAATGAGAAATACT | + |
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Preference number: 6 (lower is better) Translates to: IHSCLSMGVAFR*FNATESTMRNT Trigger: AGTATTTCTCATTGTGCTCTCTGTTGCATTGAACCATCTGAAAGCTACACCCATTGAAAGACAGGAATGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542023.1 |
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| CDS CAA 90 bp | AGCTTTCAGATGGTTCAATGCAACAGAGAGCACAATGAGAAATACTaGCAGCTTCAGGATGCCCATTGCTTCTCAAATTTTCTTTTAATG | + |
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Preference number: 6 (lower is better) Translates to: SFQMVQCNREHNEKY*QLQDAHCFSNFLLM Trigger: CATTAAAAGAAAATTTGAGAAGCAATGGGCATCCTGAAGCTGCAAGTATTTCTCATTGTGCTCTCTGTTGCATTGAACCATCTGAAAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000240652.8 ENST00000542023.1 |
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