RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HSPB8 (Homo sapiens)

Ensembl gene IDs: ENSG00000152137

Ensembl transcript IDs: ENST00000281938.7, ENST00000541798.1, ENST00000542496.1, ENST00000674542.1, ENST00000674715.1, ENST00000674763.1, ENST00000675110.1, ENST00000675211.1, ENST00000675573.1, ENST00000675900.1, ENST00000676071.1

Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GATCCACCTCTGCAGGAAGCCTCACAGGGCACCGAGCAGATGAGATaGTGCAATCTATGTGCTCCCCCTTCTGGGACCCTATTACAGGTC +
Preference number: 1 (lower is better)
Translates to: DPPLQEASQGTEQMR*CNLCAPPSGTLLQV
Trigger: GACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAGATTGCATCATCTCATCTGCTCGGTGCCCTGTGAGGCTTCCTGCAGAGGTGGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
3UTR TCA 90 bp GCTGTCCTGGGGAAGCTCGTTGTTGAAACTGCTCTCTCCAAATGTTaGGTAAGGAGGGACCTGGGGAGCTTCGATGATCAGCAGACCCTC +
Preference number: 1 (lower is better)
Translates to: AVLGKLVVETALSKC*VRRDLGSFDDQQTL
Trigger: GAGGGTCTGCTGATCATCGAAGCTCCCCAGGTCCCTCCTTACTCAACATTTGGAGAGAGCAGTTTCAACAACGAGCTTCCCCAGGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674542.1
ENST00000675110.1
ENST00000675211.1
3UTR GCA 90 bp TGGAAGCACAGTGGGGTTAGCTACTGGGTTTCATTAACCAAACCATaGGGCATGGTTTGGGAGCCATGGGAATCGGGAGCCCAGAGTAGG +
Preference number: 1 (lower is better)
Translates to: WKHSGVSYWVSLTKP*GMVWEPWESGAQSR
Trigger: CCTACTCTGGGCTCCCGATTCCCATGGCTCCCAAACCATGCCGCATGGTTTGGTTAATGAAACCCAGTAGCTAACCCCACTGTGCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR CCA 90 bp GGGGTTAGCTACTGGGTTTCATTAACCAAACCATGCGGCATGGTTTaGGAGCCATGGGAATCGGGAGCCCAGAGTAGGAACCTGGGTGAT +
Preference number: 1 (lower is better)
Translates to: GVSYWVSLTKPCGMV*EPWESGAQSRNLGD
Trigger: ATCACCCAGGTTCCTACTCTGGGCTCCCGATTCCCATGGCTCCCAAACCATGCCGCATGGTTTGGTTAATGAAACCCAGTAGCTAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR CCA 90 bp TATCCTGGAATCAGAGAAGCCCTAGGGTTGGGGACAAAACAAGGATaGGCCAGTACTGGCATCTCAGGTACAGGTGACTTCCTGGCTGTC +
Preference number: 1 (lower is better)
Translates to: YPGIREALGLGTKQG*ASTGISGTGDFLAV
Trigger: GACAGCCAGGAAGTCACCTGTACCTGAGATGCCAGTACTGGCCCATCCTTGTTTTGTCCCCAACCCTAGGGCTTCTCTGATTCCAGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674542.1
3UTR GCA 90 bp GGAAGCCTCACAGGGCACCGAGCAGATGAGATGATGCAATCTATGTaGTCCCCCTTCTGGGACCCTATTACAGGTCTGCTGGGATATTTT +
Preference number: 1 (lower is better)
Translates to: GSLTGHRADEMMQSM*SPFWDPITGLLGYF
Trigger: AAAATATCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAGATTGCATCATCTCATCTGCTCGGTGCCCTGTGAGGCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
3UTR CCA 90 bp ACCCATTTTAGGCCAGGCATGTGGAAGCACAGTGGGGTTAGCTACTaGGTTTCATTAACCAAACCATGCGGCATGGTTTGGGAGCCATGG +
Preference number: 1 (lower is better)
Translates to: THFRPGMWKHSGVSY*VSLTKPCGMVWEPW
Trigger: CCATGGCTCCCAAACCATGCCGCATGGTTTGGTTAATGAAACCCAGTAGCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAAATGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR CCA 90 bp GGGCACCGAGCAGATGAGATGATGCAATCTATGTGCTCCCCCTTCTaGGACCCTATTACAGGTCTGCTGGGATATTTTCTCCTCGTTAGG +
Preference number: 1 (lower is better)
Translates to: GHRADEMMQSMCSPF*DPITGLLGYFLLVR
Trigger: CCTAACGAGGAGAAAATATCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAGATTGCATCATCTCATCTGCTCGGTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675211.1
3UTR CCA 90 bp AACAAGGATGGGCCAGTACTGGCATCTCAGGTACAGGTGACTTCCTaGCTGTCCTGGGGAAGCTCGTTGTTGAAACTGCTCTCTCCAAAT +
Preference number: 1 (lower is better)
Translates to: NKDGPVLASQVQVTS*LSWGSSLLKLLSPN
Trigger: ATTTGGAGAGAGCAGTTTCAACAACGAGCTTCCCCAGGACAGCCAGGAAGTCACCTGTACCTGAGATGCCAGTACTGGCCCATCCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674542.1
3UTR GCA 90 bp CTCCCAGCGTCCTTAGGGAGTGCTAATGTGGAAACTTTGAGAACGTaGTGGACACATCTGGGCAGAGGGCAGAAGGCACTGTTTGTTTTT +
Preference number: 1 (lower is better)
Translates to: LPASLGSANVETLRT*WTHLGRGQKALFVF
Trigger: AAAAACAAACAGTGCCTTCTGCCCTCTGCCCAGATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAGCACTCCCTAAGGACGCTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR CCA 90 bp CCAGCGTCCTTAGGGAGTGCTAATGTGGAAACTTTGAGAACGTGCTaGACACATCTGGGCAGAGGGCAGAAGGCACTGTTTGTTTTTATG +
Preference number: 1 (lower is better)
Translates to: PASLGSANVETLRTC*THLGRGQKALFVFM
Trigger: CATAAAAACAAACAGTGCCTTCTGCCCTCTGCCCAGATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAGCACTCCCTAAGGACGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR CCA 90 bp GCTATCCTGTGGAGAAATCTACCACTACACTATCCAGGGAATCTGTaGTCAGTCCTCACCCCCGCACCCTCTAACATTTTACTTGCACTA +
Preference number: 1 (lower is better)
Translates to: AILWRNLPLHYPGNL*SVLTPAPSNILLAL
Trigger: TAGTGCAAGTAAAATGTTAGAGGGTGCGGGGGTGAGGACTGACCACAGATTCCCTGGATAGTGTAGTGGTAGATTTCTCCACAGGATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR CCA 90 bp TACACAATACCACTAGCCTATCTGTCAGGCTATCTGGCCTTTGCTTaGTTCCTGATGGAGCTGTCTGGAGACAGCTCCCTCTGTAAAAAT +
Preference number: 1 (lower is better)
Translates to: YTIPLAYLSGYLAFA*FLMELSGDSSLCKN
Trigger: ATTTTTACAGAGGGAGCTGTCTCCAGACAGCTCCATCAGGAACCAAGCAAAGGCCAGATAGCCTGACAGATAGGCTAGTGGTATTGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR TCA 90 bp TCCTTAGGGAGTGCTAATGTGGAAACTTTGAGAACGTGCTGGACACATCTGGGCCCTGGGGAGCTTCGATaGTCAGCAGACCCTCTGGGG +
Preference number: 2 (lower is better)
Translates to: SLGSANVETLRTCWTHLGPGELR*SADPLG
Trigger: CCCCAGAGGGTCTGCTGATCATCGAAGCTCCCCAGG...GCCCAGATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAGCACTCCCTAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674542.1
3UTR-3UTR CCA 90 bp CACGTCCCGCCCATATACACAATACCACTAGCCTATCTGTCAGGCTATCTGGCCATGGTTTGGGAGCCATaGGAATCGGGAGCCCAGAGT +
Preference number: 2 (lower is better)
Translates to: HVPPIYTIPLAYLSGYLAMVWEP*ESGAQS
Trigger: ACTCTGGGCTCCCGATTCCCATGGCTCCCAAACCAT...GGCCAGATAGCCTGACAGATAGGCTAGTGGTATTGTGTATATGGGCGGGACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR TCA 90 bp GGTGACTTCCTGGCTGTCCTGGGGAAGCTCGTTGTTGAAACTGCTCTCTCCAAAACCCTCTGGGGAAAGTaGGGCAAATACTGTCACAGG +
Preference number: 2 (lower is better)
Translates to: GDFLAVLGKLVVETALSKTLWGK*GKYCHR
Trigger: CCTGTGACAGTATTTGCCTCACTTTCCCCAGAGGGT...TTTGGAGAGAGCAGTTTCAACAACGAGCTTCCCCAGGACAGCCAGGAAGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
3UTR-3UTR TCA 90 bp CGTGCTGGACACATCTGGGCAGAGGGCAGAAGGCACTGTTTGTTTTTATGTGGTGGTCAGATCATAAACTaGCAGGCTCCCAGCGTCCTT +
Preference number: 2 (lower is better)
Translates to: RAGHIWAEGRRHCLFLCGGQIIN*QAPSVL
Trigger: AAGGACGCTGGGAGCCTGTCAGTTTATGATCTGACC...ACCACATAAAAACAAACAGTGCCTTCTGCCCTCTGCCCAGATGTGTCCAGCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR TCA 90 bp GCCCATATACACAATACCACTAGCCTATCTGTCAGGCTATCTGGCCTTTGCTTGCATCTCAGGTACAGGTaGCTTCCTGGCTGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: AHIHNTTSLSVRLSGLCLHLRYR*LPGCPG
Trigger: CCCAGGACAGCCAGGAAGTCACCTGTACCTGAGATG...CAAGCAAAGGCCAGATAGCCTGACAGATAGGCTAGTGGTATTGTGTATATGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674542.1
3UTR-3UTR CCA 90 bp CACACACGTCCCGCCCATATACACAATACCACTAGCCTATCTGTCAGGCTATCTTATCCAGGGAATCTGTaGTCAGTCCTCACCCCCGCA +
Preference number: 2 (lower is better)
Translates to: HTRPAHIHNTTSLSVRLSYPGNL*SVLTPA
Trigger: TGCGGGGGTGAGGACTGACCACAGATTCCCTGGATA...AGATAGCCTGACAGATAGGCTAGTGGTATTGTGTATATGGGCGGGACGTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR CCA 90 bp GCGTCCTTAGGGAGTGCTAATGTGGAAACTTTGAGAACGTGCTGGACACATCTGATGGTTTGGGAGCCATaGGAATCGGGAGCCCAGAGT +
Preference number: 2 (lower is better)
Translates to: ASLGSANVETLRTCWTHLMVWEP*ESGAQS
Trigger: ACTCTGGGCTCCCGATTCCCATGGCTCCCAAACCAT...CAGATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAGCACTCCCTAAGGACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR CCA 90 bp ACCCATTTTAGGCCAGGCATGTGGAAGCACAGTGGGGTTAGCTACTGGGTTTCATTTAGGCCAGGCATGTaGAAGCACAGTGGGGTTAGC +
Preference number: 2 (lower is better)
Translates to: THFRPGMWKHSGVSYWVSFRPGM*KHSGVS
Trigger: GCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAA...TGAAACCCAGTAGCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAAATGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR GCA 90 bp GTCAGGCTATCTGGCCTTTGCTTGGTTCCTGATGGAGCTGTCTGGAGACAGCTCCAACCAAGCATGATTTaGCAATTGCGCTATCCTGTG +
Preference number: 2 (lower is better)
Translates to: VRLSGLCLVPDGAVWRQLQPSMI*QLRYPV
Trigger: CACAGGATAGCGCAATTGGCAAATCATGCTTGGTTG...GAGCTGTCTCCAGACAGCTCCATCAGGAACCAAGCAAAGGCCAGATAGCCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR CCA 90 bp TACACAATACCACTAGCCTATCTGTCAGGCTATCTGGCCTTTGCTTGGTTCCTGTATCCAGGGAATCTGTaGTCAGTCCTCACCCCCGCA +
Preference number: 2 (lower is better)
Translates to: YTIPLAYLSGYLAFAWFLYPGNL*SVLTPA
Trigger: TGCGGGGGTGAGGACTGACCACAGATTCCCTGGATA...CAGGAACCAAGCAAAGGCCAGATAGCCTGACAGATAGGCTAGTGGTATTGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR CCA 90 bp CGTGCTGGACACATCTGGGCAGAGGGCAGAAGGCACTGTTTGTTTTTATGTGGTGGGACAAAACAAGGATaGGCCAGTACTGGCATCTCA +
Preference number: 2 (lower is better)
Translates to: RAGHIWAEGRRHCLFLCGGTKQG*ASTGIS
Trigger: TGAGATGCCAGTACTGGCCCATCCTTGTTTTGTCCC...ACCACATAAAAACAAACAGTGCCTTCTGCCCTCTGCCCAGATGTGTCCAGCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674542.1
3UTR-3UTR TCA 90 bp TCCTTAGGGAGTGCTAATGTGGAAACTTTGAGAACGTGCTGGACACATCTGGGCGGGGAAGCTCGTTGTTaGAACTGCTCTCTCCAAATG +
Preference number: 2 (lower is better)
Translates to: SLGSANVETLRTCWTHLGGEARC*NCSLQM
Trigger: CATTTGGAGAGAGCAGTTTCAACAACGAGCTTCCCC...GCCCAGATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAGCACTCCCTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674542.1
3UTR-3UTR GCA 90 bp CACACACGTCCCGCCCATATACACAATACCACTAGCCTATCTGTCAGGCTATCTAGGCTATCTGGCCTTTaGTTGGTTCCTGATGGAGCT +
Preference number: 2 (lower is better)
Translates to: HTRPAHIHNTTSLSVRLSRLSGL*LVPDGA
Trigger: AGCTCCATCAGGAACCAAGCAAAGGCCAGATAGCCT...AGATAGCCTGACAGATAGGCTAGTGGTATTGTGTATATGGGCGGGACGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR CCA 90 bp TACACAATACCACTAGCCTATCTGTCAGGCTATCTGGCCTTTGCTTGGTTCCTGACTTTGAGAACGTGCTaGACACATCTGGGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: YTIPLAYLSGYLAFAWFLTLRTC*THLGRG
Trigger: CCCTCTGCCCAGATGTGTCCAGCACGTTCTCAAAGT...CAGGAACCAAGCAAAGGCCAGATAGCCTGACAGATAGGCTAGTGGTATTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR GCA 90 bp GTGACTTCCTGGCTGTCCTGGGGAAGCTCGTTGTTGAAACTGCTCTCTCCAAATACCCTATTACAGGTCTaGTGGGATATTTTCTCCTCG +
Preference number: 2 (lower is better)
Translates to: VTSWLSWGSSLLKLLSPNTLLQV*WDIFSS
Trigger: CGAGGAGAAAATATCCCAGCAGACCTGTAATAGGGT...ATTTGGAGAGAGCAGTTTCAACAACGAGCTTCCCCAGGACAGCCAGGAAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
3UTR CAA 90 bp AGTTCAGCTAAAGTAATGTATCCTGGAATCAGAGAAGCCCTAGGGTaGGGGACAAAACAAGGATGGGCCAGTACTGGCATCTCAGGTACA +
Preference number: 2 (lower is better)
Translates to: SSAKVMYPGIREALG*GTKQGWASTGISGT
Trigger: TGTACCTGAGATGCCAGTACTGGCCCATCCTTGTTTTGTCCCCAACCCTAGGGCTTCTCTGATTCCAGGATACATTACTTTAGCTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674542.1
3UTR-3UTR GCA 90 bp CTGATGGAGCTGTCTGGAGACAGCTCCCTCTGTAAAAATCCCGACTTAAACACATCATTAACCAAACCATaGGGCATGGTTTGGGAGCCA +
Preference number: 2 (lower is better)
Translates to: LMELSGDSSLCKNPDLNTSLTKP*GMVWEP
Trigger: TGGCTCCCAAACCATGCCGCATGGTTTGGTTAATGA...TGTGTTTAAGTCGGGATTTTTACAGAGGGAGCTGTCTCCAGACAGCTCCATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR CCA 90 bp ACCCATTTTAGGCCAGGCATGTGGAAGCACAGTGGGGTTAGCTACTGGGTTTCAAATTGCGCTATCCTGTaGAGAAATCTACCACTACAC +
Preference number: 2 (lower is better)
Translates to: THFRPGMWKHSGVSYWVSNCAIL*RNLPLH
Trigger: GTGTAGTGGTAGATTTCTCCACAGGATAGCGCAATT...TGAAACCCAGTAGCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAAATGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR CCA 90 bp TCTGCAGGAAGCCTCACAGGGCACCGAGCAGATGAGATGATGCAATCTATGTGCCTATTACAGGTCTGCTaGGATATTTTCTCCTCGTTA +
Preference number: 2 (lower is better)
Translates to: SAGSLTGHRADEMMQSMCLLQVC*DIFSSL
Trigger: TAACGAGGAGAAAATATCCCAGCAGACCTGTAATAG...GCACATAGATTGCATCATCTCATCTGCTCGGTGCCCTGTGAGGCTTCCTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675211.1
3UTR-3UTR CCA 90 bp TTTAGGCCAGGCATGTGGAAGCACAGTGGGGTTAGCTACTGGGTTTCATTAACCAGTGGGGTTAGCTACTaGGTTTCATTAACCAAACCA +
Preference number: 2 (lower is better)
Translates to: FRPGMWKHSGVSYWVSLTSGVSY*VSLTKP
Trigger: TGGTTTGGTTAATGAAACCCAGTAGCTAACCCCACT...GGTTAATGAAACCCAGTAGCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR CCA 90 bp GCCCATATACACAATACCACTAGCCTATCTGTCAGGCTATCTGGCCTTTGCTTGAATTGCGCTATCCTGTaGAGAAATCTACCACTACAC +
Preference number: 2 (lower is better)
Translates to: AHIHNTTSLSVRLSGLCLNCAIL*RNLPLH
Trigger: GTGTAGTGGTAGATTTCTCCACAGGATAGCGCAATT...CAAGCAAAGGCCAGATAGCCTGACAGATAGGCTAGTGGTATTGTGTATATGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR GCA 90 bp ACCCCTAAACAACAGCATAACTCAAATAATAATGACACACACGTCCCGCCCATATCATTAACCAAACCATaGGGCATGGTTTGGGAGCCA +
Preference number: 2 (lower is better)
Translates to: TPKQQHNSNNNDTHVPPISLTKP*GMVWEP
Trigger: TGGCTCCCAAACCATGCCGCATGGTTTGGTTAATGA...TATGGGCGGGACGTGTGTGTCATTATTATTTGAGTTATGCTGTTGTTTAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR CCA 90 bp CACACACGTCCCGCCCATATACACAATACCACTAGCCTATCTGTCAGGCTATCTGCAAAACTAGTATTTTaGCCTAACACAACCAAGCAT +
Preference number: 2 (lower is better)
Translates to: HTRPAHIHNTTSLSVRLSAKLVF*PNTTKH
Trigger: ATGCTTGGTTGTGTTAGGCCAAAATACTAGTTTTGC...AGATAGCCTGACAGATAGGCTAGTGGTATTGTGTATATGGGCGGGACGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR GCA 90 bp CACACACGTCCCGCCCATATACACAATACCACTAGCCTATCTGTCAGGCTATCTCCCTTTTATGTGTTTTaGAACTATAGAATGTGCAAC +
Preference number: 2 (lower is better)
Translates to: HTRPAHIHNTTSLSVRLSPFYVF*NYRMCN
Trigger: GTTGCACATTCTATAGTTGCAAAACACATAAAAGGG...AGATAGCCTGACAGATAGGCTAGTGGTATTGTGTATATGGGCGGGACGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR TCA 90 bp AACAACAGCATAACTCAAATAATAATGACACACACGTCCCGCCCATATACACAACTAATGTGGAAACTTTaGGAACGTGCTGGACACATC +
Preference number: 2 (lower is better)
Translates to: NNSITQIIMTHTSRPYTQLMWKL*ERAGHI
Trigger: GATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAG...TTGTGTATATGGGCGGGACGTGTGTGTCATTATTATTTGAGTTATGCTGTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR CAA 90 bp AAGAAAGCAAAACTAGTATTTTGGCCTAACACAACCAAGCATGATTaGCCAATTGCGCTATCCTGTGGAGAAATCTACCACTACACTATC +
Preference number: 2 (lower is better)
Translates to: KKAKLVFWPNTTKHD*PIALSCGEIYHYTI
Trigger: GATAGTGTAGTGGTAGATTTCTCCACAGGATAGCGCAATTGGCAAATCATGCTTGGTTGTGTTAGGCCAAAATACTAGTTTTGCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR GCA 90 bp AGCATAACTCAAATAATAATGACACACACGTCCCGCCCATATACACAATACCACCCCTTTTATGTGTTTTaGAACTATAGAATGTGCAAC +
Preference number: 2 (lower is better)
Translates to: SITQIIMTHTSRPYTQYHPFYVF*NYRMCN
Trigger: GTTGCACATTCTATAGTTGCAAAACACATAAAAGGG...GTGGTATTGTGTATATGGGCGGGACGTGTGTGTCATTATTATTTGAGTTATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR CAA 90 bp GTTTGGGAGCCATGGGAATCGGGAGCCCAGAGTAGGAACCTGGGTGATGGGGGAACCATGCGGCATGGTTaGGGAGCCATGGGAATCGGG +
Preference number: 3 (lower is better)
Translates to: VWEPWESGAQSRNLGDGGTMRHG*GAMGIG
Trigger: CCCGATTCCCATGGCTCCCAAACCATGCCGCATGGT...TCCCCCATCACCCAGGTTCCTACTCTGGGCTCCCGATTCCCATGGCTCCCAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR TCA 72 bp CTGCAGGAAGCCTCACAGGGCACCGAGCAGATGAGATaGTGCAATCTATGTGCTCCCCCTTCTGGGACCCTA +
Preference number: 3 (lower is better)
Translates to: LQEASQGTEQMR*CNLCAPPSGTL
Trigger: TAGGGTCCCAGAAGGGGGAGCACATAGATTGCATCATCTCATCTGCTCGGTGCCCTGTGAGGCTTCCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
3UTR TCA 72 bp CACCTCTGCAGGAAGCCTCACAGGGCACCGAGCAGATaGGATGATGCAATCTATGTGCTCCCCCTTCTGGGA +
Preference number: 3 (lower is better)
Translates to: HLCRKPHRAPSR*DDAIYVLPLLG
Trigger: TCCCAGAAGGGGGAGCACATAGATTGCATCATCTCATCTGCTCGGTGCCCTGTGAGGCTTCCTGCAGAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
3UTR CCA 72 bp GGGCCAGTACTGGCATCTCAGGTACAGGTGACTTCCTaGCTGTCCTGGGGAAGCTCGTTGTTGAAACTGCTC +
Preference number: 3 (lower is better)
Translates to: GPVLASQVQVTS*LSWGSSLLKLL
Trigger: GAGCAGTTTCAACAACGAGCTTCCCCAGGACAGCCAGGAAGTCACCTGTACCTGAGATGCCAGTACTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674542.1
3UTR CCA 72 bp CCACTAGCCTATCTGTCAGGCTATCTGGCCTTTGCTTaGTTCCTGATGGAGCTGTCTGGAGACAGCTCCCTC +
Preference number: 3 (lower is better)
Translates to: PLAYLSGYLAFA*FLMELSGDSSL
Trigger: GAGGGAGCTGTCTCCAGACAGCTCCATCAGGAACCAAGCAAAGGCCAGATAGCCTGACAGATAGGCTAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR GCA 72 bp AGTGGGGTTAGCTACTGGGTTTCATTAACCAAACCATaGGGCATGGTTTGGGAGCCATGGGAATCGGGAGCC +
Preference number: 3 (lower is better)
Translates to: SGVSYWVSLTKP*GMVWEPWESGA
Trigger: GGCTCCCGATTCCCATGGCTCCCAAACCATGCCGCATGGTTTGGTTAATGAAACCCAGTAGCTAACCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR GCA 72 bp ACAGGGCACCGAGCAGATGAGATGATGCAATCTATGTaGTCCCCCTTCTGGGACCCTATTACAGGTCTGCTG +
Preference number: 3 (lower is better)
Translates to: TGHRADEMMQSM*SPFWDPITGLL
Trigger: CAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAGATTGCATCATCTCATCTGCTCGGTGCCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
3UTR GCA 72 bp TCCTTAGGGAGTGCTAATGTGGAAACTTTGAGAACGTaGTGGACACATCTGGGCAGAGGGCAGAAGGCACTG +
Preference number: 3 (lower is better)
Translates to: SLGSANVETLRT*WTHLGRGQKAL
Trigger: CAGTGCCTTCTGCCCTCTGCCCAGATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAGCACTCCCTAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR CCA 72 bp TACTGGGTTTCATTAACCAAACCATGCGGCATGGTTTaGGAGCCATGGGAATCGGGAGCCCAGAGTAGGAAC +
Preference number: 3 (lower is better)
Translates to: YWVSLTKPCGMV*EPWESGAQSRN
Trigger: GTTCCTACTCTGGGCTCCCGATTCCCATGGCTCCCAAACCATGCCGCATGGTTTGGTTAATGAAACCCAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR CCA 72 bp AGGCCAGGCATGTGGAAGCACAGTGGGGTTAGCTACTaGGTTTCATTAACCAAACCATGCGGCATGGTTTGG +
Preference number: 3 (lower is better)
Translates to: RPGMWKHSGVSY*VSLTKPCGMVW
Trigger: CCAAACCATGCCGCATGGTTTGGTTAATGAAACCCAGTAGCTAACCCCACTGTGCTTCCACATGCCTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR CCA 72 bp CTGGCATCTCAGGTACAGGTGACTTCCTGGCTGTCCTaGGGAAGCTCGTTGTTGAAACTGCTCTCTCCAAAT +
Preference number: 3 (lower is better)
Translates to: LASQVQVTSWLS*GSSLLKLLSPN
Trigger: ATTTGGAGAGAGCAGTTTCAACAACGAGCTTCCCCAGGACAGCCAGGAAGTCACCTGTACCTGAGATGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674542.1
3UTR CCA 72 bp ATCAGAGAAGCCCTAGGGTTGGGGACAAAACAAGGATaGGCCAGTACTGGCATCTCAGGTACAGGTGACTTC +
Preference number: 3 (lower is better)
Translates to: IREALGLGTKQG*ASTGISGTGDF
Trigger: GAAGTCACCTGTACCTGAGATGCCAGTACTGGCCCATCCTTGTTTTGTCCCCAACCCTAGGGCTTCTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674542.1
3UTR-3UTR CAA 90 bp GTCAGGCTATCTGGCCTTTGCTTGGTTCCTGATGGAGCTGTCTGGAGACAGCTCGCTAATGTGGAAACTTaGAGAACGTGCTGGACACAT +
Preference number: 3 (lower is better)
Translates to: VRLSGLCLVPDGAVWRQLANVET*RTCWTH
Trigger: ATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAGC...GAGCTGTCTCCAGACAGCTCCATCAGGAACCAAGCAAAGGCCAGATAGCCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR CAA 90 bp CACACACGTCCCGCCCATATACACAATACCACTAGCCTATCTGTCAGGCTATCTTGCTCTCTCCAAATGTaGAGTAAGGAGGGACCTGGG +
Preference number: 3 (lower is better)
Translates to: HTRPAHIHNTTSLSVRLSCSLQM*SKEGPG
Trigger: CCCAGGTCCCTCCTTACTCAACATTTGGAGAGAGCA...AGATAGCCTGACAGATAGGCTAGTGGTATTGTGTATATGGGCGGGACGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674542.1
3UTR TCA 72 bp CCTATCTGTCAGGCTATCTGGCCTTTGCTTGGTTCCTaGTGGAGCTGTCTGGAGACAGCTCCCTCTGTAAAA +
Preference number: 3 (lower is better)
Translates to: PICQAIWPLLGS*WSCLETAPSVK
Trigger: TTTTACAGAGGGAGCTGTCTCCAGACAGCTCCATCAGGAACCAAGCAAAGGCCAGATAGCCTGACAGATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR TCA 72 bp CAAATGTTGAGTAAGGAGGGACCTGGGGAGCTTCGATaGTCAGCAGACCCTCTGGGGAAAGTGAGGCAAATA +
Preference number: 3 (lower is better)
Translates to: QMLSKEGPGELR*SADPLGKVRQI
Trigger: TATTTGCCTCACTTTCCCCAGAGGGTCTGCTGATCATCGAAGCTCCCCAGGTCCCTCCTTACTCAACATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674542.1
ENST00000675110.1
ENST00000675211.1
3UTR TCA 72 bp GGGAAGCTCGTTGTTGAAACTGCTCTCTCCAAATGTTaGGTAAGGAGGGACCTGGGGAGCTTCGATGATCAG +
Preference number: 3 (lower is better)
Translates to: GKLVVETALSKC*VRRDLGSFDDQ
Trigger: CTGATCATCGAAGCTCCCCAGGTCCCTCCTTACTCAACATTTGGAGAGAGCAGTTTCAACAACGAGCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674542.1
ENST00000675110.1
ENST00000675211.1
3UTR GCA 72 bp AATACCACTAGCCTATCTGTCAGGCTATCTGGCCTTTaGTTGGTTCCTGATGGAGCTGTCTGGAGACAGCTC +
Preference number: 3 (lower is better)
Translates to: NTTSLSVRLSGL*LVPDGAVWRQL
Trigger: GAGCTGTCTCCAGACAGCTCCATCAGGAACCAAGCAAAGGCCAGATAGCCTGACAGATAGGCTAGTGGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR CAA 90 bp ACCCCTAAACAACAGCATAACTCAAATAATAATGACACACACGTCCCGCCCATAACCATGCGGCATGGTTaGGGAGCCATGGGAATCGGG +
Preference number: 3 (lower is better)
Translates to: TPKQQHNSNNNDTHVPPITMRHG*GAMGIG
Trigger: CCCGATTCCCATGGCTCCCAAACCATGCCGCATGGT...TATGGGCGGGACGTGTGTGTCATTATTATTTGAGTTATGCTGTTGTTTAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR CCA 72 bp TGGAGAAATCTACCACTACACTATCCAGGGAATCTGTaGTCAGTCCTCACCCCCGCACCCTCTAACATTTTA +
Preference number: 3 (lower is better)
Translates to: WRNLPLHYPGNL*SVLTPAPSNIL
Trigger: TAAAATGTTAGAGGGTGCGGGGGTGAGGACTGACCACAGATTCCCTGGATAGTGTAGTGGTAGATTTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR CCA 72 bp GCAGATGAGATGATGCAATCTATGTGCTCCCCCTTCTaGGACCCTATTACAGGTCTGCTGGGATATTTTCTC +
Preference number: 3 (lower is better)
Translates to: ADEMMQSMCSPF*DPITGLLGYFL
Trigger: GAGAAAATATCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAGATTGCATCATCTCATCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
3UTR-3UTR CAA 90 bp TTTTGGCCTAACACAACCAAGCATGATTTGCCAATTGCGCTATCCTGTGGAGAAAGAGAAGCCCTAGGGTaGGGGACAAAACAAGGATGG +
Preference number: 3 (lower is better)
Translates to: FWPNTTKHDLPIALSCGEREALG*GTKQGW
Trigger: CCATCCTTGTTTTGTCCCCAACCCTAGGGCTTCTCT...TTCTCCACAGGATAGCGCAATTGGCAAATCATGCTTGGTTGTGTTAGGCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR-3UTR CAA 90 bp CCCCTAAACAACAGCATAACTCAAATAATAATGACACACACGTCCCGCCCATATACAACCAAGCATGATTaGCCAATTGCGCTATCCTGT +
Preference number: 3 (lower is better)
Translates to: PLNNSITQIIMTHTSRPYTTKHD*PIALSC
Trigger: ACAGGATAGCGCAATTGGCAAATCATGCTTGGTTGT...ATATGGGCGGGACGTGTGTGTCATTATTATTTGAGTTATGCTGTTGTTTAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp GGAGGGACCTGGGGAGCTTCGATGATCAGCAGACCCTCTGGGGAAAGTGAGGCACCAGGCTGCCCAGGCTaGCAGCCAGAACCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GGTWGASMISRPSGESEAPGCPG*QPEPLR
Trigger: CCTCAGCGGTTCTGGCTGCCAGCCTGGGCAGCCTGG...TGCCTCACTTTCCCCAGAGGGTCTGCTGATCATCGAAGCTCCCCAGGTCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674542.1
CDS-3UTR GCA 90 bp GGGACCTGGGGAGCTTCGATGATCAGCAGACCCTCTGGGGAAAGTGAGGCAAATGGTCCCCGTCCGCACTaGCTCACGACAGACCGGCAA +
Preference number: 4 (lower is better)
Translates to: GTWGASMISRPSGESEANGPRPH*LTTDRQ
Trigger: TTGCCGGTCTGTCGTGAGGCAGTGCGGACGGGGACC...ATTTGCCTCACTTTCCCCAGAGGGTCTGCTGATCATCGAAGCTCCCCAGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674542.1
CDS-3UTR GCA 90 bp CACGTCCCGCCCATATACACAATACCACTAGCCTATCTGTCAGGCTATCTGGCCGGCCCCGGGGCACCATaGCCGACCTTAGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: HVPPIYTIPLAYLSGYLAGPGAP*PTLGCL
Trigger: CAGGCACCCTAAGGTCGGGCATGGTGCCCCGGGGCC...GGCCAGATAGCCTGACAGATAGGCTAGTGGTATTGTGTATATGGGCGGGACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp TCTGTCAGGCTATCTGGCCTTTGCTTGGTTCCTGATGGAGCTGTCTGGAGACAGGGCCCCGGGGCACCATaGCCGACCTTAGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SVRLSGLCLVPDGAVWRQGPGAP*PTLGCL
Trigger: CAGGCACCCTAAGGTCGGGCATGGTGCCCCGGGGCC...CTGTCTCCAGACAGCTCCATCAGGAACCAAGCAAAGGCCAGATAGCCTGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR TCA 90 bp AACAAGGATGGGCCAGTACTGGCATCTCAGGTACAGGTGACTTCCTGGCTGTCCCCTGGGGAGCTTCGATaGTCAGCAGACCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: NKDGPVLASQVQVTSWLSPGELR*SADPLG
Trigger: CCCCAGAGGGTCTGCTGATCATCGAAGCTCCCCAGG...GGACAGCCAGGAAGTCACCTGTACCTGAGATGCCAGTACTGGCCCATCCTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674542.1
CDS-3UTR TCA 90 bp ACAGGTGACTTCCTGGCTGTCCTGGGGAAGCTCGTTGTTGAAACTGCTCTCTCCCCTGGGGAGCTTCGATaGTCAGCAGACCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: TGDFLAVLGKLVVETALSPGELR*SADPLG
Trigger: CCCCAGAGGGTCTGCTGATCATCGAAGCTCCCCAGG...GGAGAGAGCAGTTTCAACAACGAGCTTCCCCAGGACAGCCAGGAAGTCACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000674542.1
ENST00000675110.1
ENST00000675211.1
CDS-3UTR TCA 90 bp ACAGGGCACCGAGCAGATGAGATGATGCAATCTATGTGCTCCCCCTTCTGGGACCCTGGGGAGCTTCGATaGTCAGCAGACCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: TGHRADEMMQSMCSPFWDPGELR*SADPLG
Trigger: CCCCAGAGGGTCTGCTGATCATCGAAGCTCCCCAGG...GTCCCAGAAGGGGGAGCACATAGATTGCATCATCTCATCTGCTCGGTGCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR TCA 90 bp AAACCATGCGGCATGGTTTGGGAGCCATGGGAATCGGGAGCCCAGAGTAGGAACCATCTCAGGTACAGGTaGCTTCCTGGCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KPCGMVWEPWESGAQSRNHLRYR*LPGCPG
Trigger: CCCAGGACAGCCAGGAAGTCACCTGTACCTGAGATG...GTTCCTACTCTGGGCTCCCGATTCCCATGGCTCCCAAACCATGCCGCATGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp ACCCATTTTAGGCCAGGCATGTGGAAGCACAGTGGGGTTAGCTACTGGGTTTCATGCCCGACCTTAGGGTaGCTGGCCAGGCGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: THFRPGMWKHSGVSYWVSCPTLG*LARRRR
Trigger: TCTCCTCCGCCTGGCCAGGCACCCTAAGGTCGGGCA...TGAAACCCAGTAGCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAAATGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp GGTTTCATTAACCAAACCATGCGGCATGGTTTGGGAGCCATGGGAATCGGGAGCTTGTGTCCCCTCGACTaGGGTCCCAGCCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GFINQTMRHGLGAMGIGSLCPLD*GPSPQR
Trigger: CCTTTGGGGGCTGGGACCCCAGTCGAGGGGACACAA...GCTCCCGATTCCCATGGCTCCCAAACCATGCCGCATGGTTTGGTTAATGAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp GTCAGGCTATCTGGCCTTTGCTTGGTTCCTGATGGAGCTGTCTGGAGACAGCTCCGTGCTGGACACATCTaGGCAGAGGGCAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: VRLSGLCLVPDGAVWRQLRAGHI*AEGRRH
Trigger: GTGCCTTCTGCCCTCTGCCCAGATGTGTCCAGCACG...GAGCTGTCTCCAGACAGCTCCATCAGGAACCAAGCAAAGGCCAGATAGCCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp GGAGGGACCTGGGGAGCTTCGATGATCAGCAGACCCTCTGGGGAAAGTGAGGCAATGTGCTCCCCCTTCTaGGACCCTATTACAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GGTWGASMISRPSGESEAMCSPF*DPITGL
Trigger: CAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACAT...TGCCTCACTTTCCCCAGAGGGTCTGCTGATCATCGAAGCTCCCCAGGTCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR TCA 90 bp CACACACGTCCCGCCCATATACACAATACCACTAGCCTATCTGTCAGGCTATCTGGCAGCCAGAACCGCTaGGGTCTAGAGCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: HTRPAHIHNTTSLSVRLSGSQNR*GLERSQ
Trigger: CTGGCTCCGCTCTAGACCTCAGCGGTTCTGGCTGCC...AGATAGCCTGACAGATAGGCTAGTGGTATTGTGTATATGGGCGGGACGTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR TCA 90 bp GTCAGGCTATCTGGCCTTTGCTTGGTTCCTGATGGAGCTGTCTGGAGACAGCTCCATCTCAGGTACAGGTaGCTTCCTGGCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VRLSGLCLVPDGAVWRQLHLRYR*LPGCPG
Trigger: CCCAGGACAGCCAGGAAGTCACCTGTACCTGAGATG...GAGCTGTCTCCAGACAGCTCCATCAGGAACCAAGCAAAGGCCAGATAGCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp CACACACGTCCCGCCCATATACACAATACCACTAGCCTATCTGTCAGGCTATCTGGTCCCCGTCCGCACTaGCTCACGACAGACCGGCAA +
Preference number: 4 (lower is better)
Translates to: HTRPAHIHNTTSLSVRLSGPRPH*LTTDRQ
Trigger: TTGCCGGTCTGTCGTGAGGCAGTGCGGACGGGGACC...AGATAGCCTGACAGATAGGCTAGTGGTATTGTGTATATGGGCGGGACGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp GTTTGGGAGCCATGGGAATCGGGAGCCCAGAGTAGGAACCTGGGTGATGGGGGAAGAGACAGAACCACCTaGCCAAGGTCACACAACAAG +
Preference number: 4 (lower is better)
Translates to: VWEPWESGAQSRNLGDGGRDRTT*PRSHNK
Trigger: CTTGTTGTGTGACCTTGGGCAGGTGGTTCTGTCTCT...TCCCCCATCACCCAGGTTCCTACTCTGGGCTCCCGATTCCCATGGCTCCCAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp TTTTGGCCTAACACAACCAAGCATGATTTGCCAATTGCGCTATCCTGTGGAGAAACCTGGCGGTGGCAGTaGGGCCCCGGGGCACCATGC +
Preference number: 4 (lower is better)
Translates to: FWPNTTKHDLPIALSCGETWRWQ*GPGAPC
Trigger: GCATGGTGCCCCGGGGCCCCACTGCCACCGCCAGGT...TTCTCCACAGGATAGCGCAATTGGCAAATCATGCTTGGTTGTGTTAGGCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp GTCAGGCTATCTGGCCTTTGCTTGGTTCCTGATGGAGCTGTCTGGAGACAGCTCCCATGCGGCATGGTTTaGGAGCCATGGGAATCGGGA +
Preference number: 4 (lower is better)
Translates to: VRLSGLCLVPDGAVWRQLPCGMV*EPWESG
Trigger: TCCCGATTCCCATGGCTCCCAAACCATGCCGCATGG...GAGCTGTCTCCAGACAGCTCCATCAGGAACCAAGCAAAGGCCAGATAGCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR TCA 90 bp CGTGCTGGACACATCTGGGCAGAGGGCAGAAGGCACTGTTTGTTTTTATGTGGTCAGGAGAAGGGCATCTaGCCGTCAGCCATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: RAGHIWAEGRRHCLFLCGQEKGI*PSAMVA
Trigger: AGCCACCATGGCTGACGGTCAGATGCCCTTCTCCTG...ACCACATAAAAACAAACAGTGCCTTCTGCCCTCTGCCCAGATGTGTCCAGCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR TCA 90 bp ACAGGGCACCGAGCAGATGAGATGATGCAATCTATGTGCTCCCCCTTCTGGGACGCTCTCTCCAAATGTTaGGTAAGGAGGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: TGHRADEMMQSMCSPFWDALSKC*VRRDLG
Trigger: CCCCAGGTCCCTCCTTACTCAACATTTGGAGAGAGC...GTCCCAGAAGGGGGAGCACATAGATTGCATCATCTCATCTGCTCGGTGCCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR TCA 90 bp AAACCATGCGGCATGGTTTGGGAGCCATGGGAATCGGGAGCCCAGAGTAGGAACCCTTTGCTTGGTTCCTaGTGGAGCTGTCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: KPCGMVWEPWESGAQSRNPLLGS*WSCLET
Trigger: TGTCTCCAGACAGCTCCATCAGGAACCAAGCAAAGG...GTTCCTACTCTGGGCTCCCGATTCCCATGGCTCCCAAACCATGCCGCATGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp CCAAACCATGCGGCATGGTTTGGGAGCCATGGGAATCGGGAGCCCAGAGTAGGAAGAGACAGAACCACCTaGCCAAGGTCACACAACAAG +
Preference number: 4 (lower is better)
Translates to: PNHAAWFGSHGNREPRVGRDRTT*PRSHNK
Trigger: CTTGTTGTGTGACCTTGGGCAGGTGGTTCTGTCTCT...TCCTACTCTGGGCTCCCGATTCCCATGGCTCCCAAACCATGCCGCATGGTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp GGTTTCATTAACCAAACCATGCGGCATGGTTTGGGAGCCATGGGAATCGGGAGCTCTGACCGTCAGCCATaGTGGCTGCTCAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GFINQTMRHGLGAMGIGSSDRQP*WLLSSE
Trigger: CTCTGAGCTGAGCAGCCACCATGGCTGACGGTCAGA...GCTCCCGATTCCCATGGCTCCCAAACCATGCCGCATGGTTTGGTTAATGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR TCA 90 bp GGTTTCATTAACCAAACCATGCGGCATGGTTTGGGAGCCATGGGAATCGGGAGCGCTCTCTCCAAATGTTaGGTAAGGAGGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: GFINQTMRHGLGAMGIGSALSKC*VRRDLG
Trigger: CCCCAGGTCCCTCCTTACTCAACATTTGGAGAGAGC...GCTCCCGATTCCCATGGCTCCCAAACCATGCCGCATGGTTTGGTTAATGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR TCA 90 bp GATGATGCAATCTATGTGCTCCCCCTTCTGGGACCCTATTACAGGTCTGCTGGGGCTCTCTCCAAATGTTaGGTAAGGAGGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: DDAIYVLPLLGPYYRSAGALSKC*VRRDLG
Trigger: CCCCAGGTCCCTCCTTACTCAACATTTGGAGAGAGC...CCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAGATTGCATCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR TCA 90 bp AAACCATGCGGCATGGTTTGGGAGCCATGGGAATCGGGAGCCCAGAGTAGGAACGGGGAAGCTCGTTGTTaGAACTGCTCTCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: KPCGMVWEPWESGAQSRNGEARC*NCSLQM
Trigger: CATTTGGAGAGAGCAGTTTCAACAACGAGCTTCCCC...GTTCCTACTCTGGGCTCCCGATTCCCATGGCTCCCAAACCATGCCGCATGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp CTATGTGCTCCCCCTTCTGGGACCCTATTACAGGTCTGCTGGGATATTTTCTCCCACAGGATCCACCTCTaGAGGAAGCCTCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: LCAPPSGTLLQVCWDIFSHRIHL*RKPHRA
Trigger: TGCCCTGTGAGGCTTCCTGCAGAGGTGGATCCTGTG...GGAGAAAATATCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR GCA 90 bp ATGATGCAATCTATGTGCTCCCCCTTCTGGGACCCTATTACAGGTCTGCTGGGACACAGGATCCACCTCTaGAGGAAGCCTCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: MMQSMCSPFWDPITGLLGHRIHL*RKPHRA
Trigger: TGCCCTGTGAGGCTTCCTGCAGAGGTGGATCCTGTG...TCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAGATTGCATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR GCA 90 bp ACAGGTGACTTCCTGGCTGTCCTGGGGAAGCTCGTTGTTGAAACTGCTCTCTCCGAGGGTTCAATTCCCTaGCCCAAGGAGGTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: TGDFLAVLGKLVVETALSEGSIP*PKEVLD
Trigger: ATCCAACACCTCCTTGGGGCAGGGAATTGAACCCTC...GGAGAGAGCAGTTTCAACAACGAGCTTCCCCAGGACAGCCAGGAAGTCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675211.1
CDS-3UTR CCA 90 bp CTGATGGAGCTGTCTGGAGACAGCTCCCTCTGTAAAAATCCCGACTTAAACACATTGTGTCCCCTCGACTaGGGTCCCAGCCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LMELSGDSSLCKNPDLNTLCPLD*GPSPQR
Trigger: CCTTTGGGGGCTGGGACCCCAGTCGAGGGGACACAA...TGTGTTTAAGTCGGGATTTTTACAGAGGGAGCTGTCTCCAGACAGCTCCATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp CCCATTTTAGGCCAGGCATGTGGAAGCACAGTGGGGTTAGCTACTGGGTTTCATTCTGACCGTCAGCCATaGTGGCTGCTCAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PILGQACGSTVGLATGFHSDRQP*WLLSSE
Trigger: CTCTGAGCTGAGCAGCCACCATGGCTGACGGTCAGA...ATGAAACCCAGTAGCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp GGTTTCATTAACCAAACCATGCGGCATGGTTTGGGAGCCATGGGAATCGGGAGCGGCTGTCAAGTCGTCTaGGAAGGGGTCCATGCCAAA +
Preference number: 4 (lower is better)
Translates to: GFINQTMRHGLGAMGIGSGCQVV*EGVHAK
Trigger: TTTGGCATGGACCCCTTCCCAGACGACTTGACAGCC...GCTCCCGATTCCCATGGCTCCCAAACCATGCCGCATGGTTTGGTTAATGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp AAACCATGCGGCATGGTTTGGGAGCCATGGGAATCGGGAGCCCAGAGTAGGAACACTTCCTGGCTGTCCTaGGGAAGCTCGTTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: KPCGMVWEPWESGAQSRNTSWLS*GSSLLK
Trigger: TTTCAACAACGAGCTTCCCCAGGACAGCCAGGAAGT...GTTCCTACTCTGGGCTCCCGATTCCCATGGCTCCCAAACCATGCCGCATGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp GGGACCTGGGGAGCTTCGATGATCAGCAGACCCTCTGGGGAAAGTGAGGCAAATACTTCCTGGCTGTCCTaGGGAAGCTCGTTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: GTWGASMISRPSGESEANTSWLS*GSSLLK
Trigger: TTTCAACAACGAGCTTCCCCAGGACAGCCAGGAAGT...ATTTGCCTCACTTTCCCCAGAGGGTCTGCTGATCATCGAAGCTCCCCAGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674542.1
ENST00000675110.1
ENST00000675211.1
CDS-3UTR CCA 90 bp GGAAGCCTCACAGGGCACCGAGCAGATGAGATGATGCAATCTATGTGCTCCCCCACTTCCTGGCTGTCCTaGGGAAGCTCGTTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: GSLTGHRADEMMQSMCSPTSWLS*GSSLLK
Trigger: TTTCAACAACGAGCTTCCCCAGGACAGCCAGGAAGT...GGGGGAGCACATAGATTGCATCATCTCATCTGCTCGGTGCCCTGTGAGGCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR CCA 90 bp CACGTCCCGCCCATATACACAATACCACTAGCCTATCTGTCAGGCTATCTGGCCTATCCAGGGAATCTGTaGTCAGTCCTCACCCCCGCA +
Preference number: 4 (lower is better)
Translates to: HVPPIYTIPLAYLSGYLAYPGNL*SVLTPA
Trigger: TGCGGGGGTGAGGACTGACCACAGATTCCCTGGATA...GGCCAGATAGCCTGACAGATAGGCTAGTGGTATTGTGTATATGGGCGGGACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR CAA 72 bp ACCACTAGCCTATCTGTCAGGCTATCTGGCCTTTGCTaGGTTCCTGATGGAGCTGTCTGGAGACAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: TTSLSVRLSGLC*VPDGAVWRQLP
Trigger: AGGGAGCTGTCTCCAGACAGCTCCATCAGGAACCAAGCAAAGGCCAGATAGCCTGACAGATAGGCTAGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR TCA 90 bp CCCATTTTAGGCCAGGCATGTGGAAGCACAGTGGGGTTAGCTACTGGGTTTCATGCTCTCTCCAAATGTTaGGTAAGGAGGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: PILGQACGSTVGLATGFHALSKC*VRRDLG
Trigger: CCCCAGGTCCCTCCTTACTCAACATTTGGAGAGAGC...ATGAAACCCAGTAGCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR TCA 90 bp AGCCTCACAGGGCACCGAGCAGATGAGATGATGCAATCTATGTGCTCCCCCTTCGGGGAAGCTCGTTGTTaGAACTGCTCTCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: SLTGHRADEMMQSMCSPFGEARC*NCSLQM
Trigger: CATTTGGAGAGAGCAGTTTCAACAACGAGCTTCCCC...GAAGGGGGAGCACATAGATTGCATCATCTCATCTGCTCGGTGCCCTGTGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR GCA 90 bp AACGTGCTGGACACATCTGGGCAGAGGGCAGAAGGCACTGTTTGTTTTTATGTGCACAGGATCCACCTCTaGAGGAAGCCAGACACCTCC +
Preference number: 4 (lower is better)
Translates to: NVLDTSGQRAEGTVCFYVHRIHL*RKPDTS
Trigger: GGAGGTGTCTGGCTTCCTGCAGAGGTGGATCCTGTG...CACATAAAAACAAACAGTGCCTTCTGCCCTCTGCCCAGATGTGTCCAGCACGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674542.1
CDS-3UTR CCA 90 bp CCCCTAAACAACAGCATAACTCAAATAATAATGACACACACGTCCCGCCCATATCCAGGCTGCCCAGGCTaGCAGCCAGAACCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PLNNSITQIIMTHTSRPYPGCPG*QPEPLR
Trigger: CCTCAGCGGTTCTGGCTGCCAGCCTGGGCAGCCTGG...ATATGGGCGGGACGTGTGTGTCATTATTATTTGAGTTATGCTGTTGTTTAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp TGGGTTTCATTAACCAAACCATGCGGCATGGTTTGGGAGCCATGGGAATCGGGAATGGTTTGGGAGCCATaGGAATCGGGAGCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: WVSLTKPCGMVWEPWESGMVWEP*ESGAQS
Trigger: ACTCTGGGCTCCCGATTCCCATGGCTCCCAAACCAT...TCCCGATTCCCATGGCTCCCAAACCATGCCGCATGGTTTGGTTAATGAAACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp CGTGCTGGACACATCTGGGCAGAGGGCAGAAGGCACTGTTTGTTTTTATGTGGTATGGTTTGGGAGCCATaGGAATCGGGAGCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: RAGHIWAEGRRHCLFLCGMVWEP*ESGAQS
Trigger: ACTCTGGGCTCCCGATTCCCATGGCTCCCAAACCAT...ACCACATAAAAACAAACAGTGCCTTCTGCCCTCTGCCCAGATGTGTCCAGCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp CACGTCCCGCCCATATACACAATACCACTAGCCTATCTGTCAGGCTATCTGGCCCCAAACCATGCGGCATaGTTTGGGAGCCATGGGAAT +
Preference number: 4 (lower is better)
Translates to: HVPPIYTIPLAYLSGYLAPNHAA*FGSHGN
Trigger: ATTCCCATGGCTCCCAAACCATGCCGCATGGTTTGG...GGCCAGATAGCCTGACAGATAGGCTAGTGGTATTGTGTATATGGGCGGGACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp ACCTGGGGAGCTTCGATGATCAGCAGACCCTCTGGGGAAAGTGAGGCAAATACTATGTGCTCCCCCTTCTaGGACCCTATTACAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TWGASMISRPSGESEANTMCSPF*DPITGL
Trigger: CAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACAT...AGTATTTGCCTCACTTTCCCCAGAGGGTCTGCTGATCATCGAAGCTCCCCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR TCA 90 bp GCTAAAGTAATGTATCCTGGAATCAGAGAAGCCCTAGGGTTGGGGACAAAACAACCTGGGGAGCTTCGATaGTCAGCAGACCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: AKVMYPGIREALGLGTKQPGELR*SADPLG
Trigger: CCCCAGAGGGTCTGCTGATCATCGAAGCTCCCCAGG...TTGTTTTGTCCCCAACCCTAGGGCTTCTCTGATTCCAGGATACATTACTTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp TGGGTTTCATTAACCAAACCATGCGGCATGGTTTGGGAGCCATGGGAATCGGGAGTCAGCCATGGTGGCTaGTCAGCTCAGAGAGAAACA +
Preference number: 4 (lower is better)
Translates to: WVSLTKPCGMVWEPWESGVSHGG*SAQRET
Trigger: TGTTTCTCTCTGAGCTGAGCAGCCACCATGGCTGAC...TCCCGATTCCCATGGCTCCCAAACCATGCCGCATGGTTTGGTTAATGAAACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp ACAGGTGACTTCCTGGCTGTCCTGGGGAAGCTCGTTGTTGAAACTGCTCTCTCCTCATTAACCAAACCATaGGGCATGGTTTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: TGDFLAVLGKLVVETALSSLTKP*GMVWEP
Trigger: TGGCTCCCAAACCATGCCGCATGGTTTGGTTAATGA...GGAGAGAGCAGTTTCAACAACGAGCTTCCCCAGGACAGCCAGGAAGTCACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674542.1
CDS-3UTR GCA 90 bp TCTGTCAGGCTATCTGGCCTTTGCTTGGTTCCTGATGGAGCTGTCTGGAGACAGAGGCTATCTGGCCTTTaGTTGGTTCCTGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: SVRLSGLCLVPDGAVWRQRLSGL*LVPDGA
Trigger: AGCTCCATCAGGAACCAAGCAAAGGCCAGATAGCCT...CTGTCTCCAGACAGCTCCATCAGGAACCAAGCAAAGGCCAGATAGCCTGACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp CGTGCTGGACACATCTGGGCAGAGGGCAGAAGGCACTGTTTGTTTTTATGTGGTGGTCACACAACAAGGTaGTGTGGCTGGGCTAGCTTA +
Preference number: 4 (lower is better)
Translates to: RAGHIWAEGRRHCLFLCGGHTTR*CGWASL
Trigger: TAAGCTAGCCCAGCCACACCACCTTGTTGTGTGACC...ACCACATAAAAACAAACAGTGCCTTCTGCCCTCTGCCCAGATGTGTCCAGCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp TTATTTACCCCTAAACAACAGCATAACTCAAATAATAATGACACACACGTCCCGACCTGGCGGTGGCAGTaGGGCCCCGGGGCACCATGC +
Preference number: 4 (lower is better)
Translates to: LFTPKQQHNSNNNDTHVPTWRWQ*GPGAPC
Trigger: GCATGGTGCCCCGGGGCCCCACTGCCACCGCCAGGT...CGGGACGTGTGTGTCATTATTATTTGAGTTATGCTGTTGTTTAGGGGTAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281938.7
CDS-3UTR TCA 90 bp TTTGGCCTAACACAACCAAGCATGATTTGCCAATTGCGCTATCCTGTGGAGAAACAGGAGAAGGGCATCTaGCCGTCAGCCATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: FGLTQPSMICQLRYPVEKQEKGI*PSAMVA
Trigger: AGCCACCATGGCTGACGGTCAGATGCCCTTCTCCTG...TTTCTCCACAGGATAGCGCAATTGGCAAATCATGCTTGGTTGTGTTAGGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR TCA 90 bp GCCTTTGCTTGGTTCCTGATGGAGCTGTCTGGAGACAGCTCCCTCTGTAAAAATACCCTCTGGGGAAAGTaGGGCAAATACTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: AFAWFLMELSGDSSLCKNTLWGK*GKYCHR
Trigger: CCTGTGACAGTATTTGCCTCACTTTCCCCAGAGGGT...ATTTTTACAGAGGGAGCTGTCTCCAGACAGCTCCATCAGGAACCAAGCAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR TCA 90 bp ATGATGCAATCTATGTGCTCCCCCTTCTGGGACCCTATTACAGGTCTGCTGGGAGGGGAAGCTCGTTGTTaGAACTGCTCTCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: MMQSMCSPFWDPITGLLGGEARC*NCSLQM
Trigger: CATTTGGAGAGAGCAGTTTCAACAACGAGCTTCCCC...TCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAGATTGCATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR TCA 90 bp ACAGGTGACTTCCTGGCTGTCCTGGGGAAGCTCGTTGTTGAAACTGCTCTCTCCCTAATGTGGAAACTTTaGGAACGTGCTGGACACATC +
Preference number: 4 (lower is better)
Translates to: TGDFLAVLGKLVVETALSLMWKL*ERAGHI
Trigger: GATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAG...GGAGAGAGCAGTTTCAACAACGAGCTTCCCCAGGACAGCCAGGAAGTCACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674542.1
CDS-3UTR GCA 90 bp AACGTGCTGGACACATCTGGGCAGAGGGCAGAAGGCACTGTTTGTTTTTATGTGGTCAGCCATGGTGGCTaGTCAGCTCAGAGAGAAACA +
Preference number: 4 (lower is better)
Translates to: NVLDTSGQRAEGTVCFYVVSHGG*SAQRET
Trigger: TGTTTCTCTCTGAGCTGAGCAGCCACCATGGCTGAC...CACATAAAAACAAACAGTGCCTTCTGCCCTCTGCCCAGATGTGTCCAGCACGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp AGCCTCACAGGGCACCGAGCAGATGAGATGATGCAATCTATGTGCTCCCCCTTCACCCTATTACAGGTCTaGTGGGATATTTTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SLTGHRADEMMQSMCSPFTLLQV*WDIFSS
Trigger: CGAGGAGAAAATATCCCAGCAGACCTGTAATAGGGT...GAAGGGGGAGCACATAGATTGCATCATCTCATCTGCTCGGTGCCCTGTGAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR GCA 90 bp GTGACTTCCTGGCTGTCCTGGGGAAGCTCGTTGTTGAAACTGCTCTCTCCAAATATGATGCAATCTATGTaGTCCCCCTTCTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: VTSWLSWGSSLLKLLSPNMMQSM*SPFWDP
Trigger: AGGGTCCCAGAAGGGGGAGCACATAGATTGCATCAT...ATTTGGAGAGAGCAGTTTCAACAACGAGCTTCCCCAGGACAGCCAGGAAGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR CCA 90 bp CTATGTGCTCCCCCTTCTGGGACCCTATTACAGGTCTGCTGGGATATTTTCTCCACTTCCTGGCTGTCCTaGGGAAGCTCGTTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: LCAPPSGTLLQVCWDIFSTSWLS*GSSLLK
Trigger: TTTCAACAACGAGCTTCCCCAGGACAGCCAGGAAGT...GGAGAAAATATCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR CCA 90 bp AATGTATCCTGGAATCAGAGAAGCCCTAGGGTTGGGGACAAAACAAGGATGGGCCCAAACCATGCGGCATaGTTTGGGAGCCATGGGAAT +
Preference number: 4 (lower is better)
Translates to: NVSWNQRSPRVGDKTRMGPNHAA*FGSHGN
Trigger: ATTCCCATGGCTCCCAAACCATGCCGCATGGTTTGG...GCCCATCCTTGTTTTGTCCCCAACCCTAGGGCTTCTCTGATTCCAGGATACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp TCCTTAGGGAGTGCTAATGTGGAAACTTTGAGAACGTGCTGGACACATCTGGGCTTTAGGCCAGGCATGTaGAAGCACAGTGGGGTTAGC +
Preference number: 4 (lower is better)
Translates to: SLGSANVETLRTCWTHLGFRPGM*KHSGVS
Trigger: GCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAA...GCCCAGATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAGCACTCCCTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp TTTGGCCTAACACAACCAAGCATGATTTGCCAATTGCGCTATCCTGTGGAGAAACGTGCTGGACACATCTaGGCAGAGGGCAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: FGLTQPSMICQLRYPVEKRAGHI*AEGRRH
Trigger: GTGCCTTCTGCCCTCTGCCCAGATGTGTCCAGCACG...TTTCTCCACAGGATAGCGCAATTGGCAAATCATGCTTGGTTGTGTTAGGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp GCGTCCTTAGGGAGTGCTAATGTGGAAACTTTGAGAACGTGCTGGACACATCTGACTTTGAGAACGTGCTaGACACATCTGGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: ASLGSANVETLRTCWTHLTLRTC*THLGRG
Trigger: CCCTCTGCCCAGATGTGTCCAGCACGTTCTCAAAGT...CAGATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAGCACTCCCTAAGGACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR TCA 90 bp AACAACAGCATAACTCAAATAATAATGACACACACGTCCCGCCCATATACACAAGGCAGCCAGAACCGCTaGGGTCTAGAGCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: NNSITQIIMTHTSRPYTQGSQNR*GLERSQ
Trigger: CTGGCTCCGCTCTAGACCTCAGCGGTTCTGGCTGCC...TTGTGTATATGGGCGGGACGTGTGTGTCATTATTATTTGAGTTATGCTGTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp GGTTTCATTAACCAAACCATGCGGCATGGTTTGGGAGCCATGGGAATCGGGAGCTCTGGCTTGAAGCTGTaGACATTCACACACACTTTC +
Preference number: 4 (lower is better)
Translates to: GFINQTMRHGLGAMGIGSSGLKL*TFTHTF
Trigger: GAAAGTGTGTGTGAATGTGCACAGCTTCAAGCCAGA...GCTCCCGATTCCCATGGCTCCCAAACCATGCCGCATGGTTTGGTTAATGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp GGTTTCATTAACCAAACCATGCGGCATGGTTTGGGAGCCATGGGAATCGGGAGCGTTTCTCTTCATGTTTaGCAGACACCTCCACGTATC +
Preference number: 4 (lower is better)
Translates to: GFINQTMRHGLGAMGIGSVSLHV*QTPPRI
Trigger: GATACGTGGAGGTGTCTGGCAAACATGAAGAGAAAC...GCTCCCGATTCCCATGGCTCCCAAACCATGCCGCATGGTTTGGTTAATGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281938.7
CDS-3UTR GCA 90 bp AATCAGAGAAGCCCTAGGGTTGGGGACAAAACAAGGATGGGCCAGTACTGGCATGAAACTTTGAGAACGTaGTGGACACATCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: NQRSPRVGDKTRMGQYWHETLRT*WTHLGR
Trigger: TCTGCCCAGATGTGTCCAGCACGTTCTCAAAGTTTC...ATGCCAGTACTGGCCCATCCTTGTTTTGTCCCCAACCCTAGGGCTTCTCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp GCAATCTATGTGCTCCCCCTTCTGGGACCCTATTACAGGTCTGCTGGGATATTTATGATGCAATCTATGTaGTCCCCCTTCTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: AIYVLPLLGPYYRSAGIFMMQSM*SPFWDP
Trigger: AGGGTCCCAGAAGGGGGAGCACATAGATTGCATCAT...AAATATCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAGATTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR CCA 90 bp ACCCATTTTAGGCCAGGCATGTGGAAGCACAGTGGGGTTAGCTACTGGGTTTCACACCATCAACTCCTCTaGCTTGAAGCTGTGCACATT +
Preference number: 4 (lower is better)
Translates to: THFRPGMWKHSGVSYWVSHHQLL*LEAVHI
Trigger: AATGTGCACAGCTTCAAGCCAGAGGAGTTGATGGTG...TGAAACCCAGTAGCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAAATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp TCCTTAGGGAGTGCTAATGTGGAAACTTTGAGAACGTGCTGGACACATCTGGGCGGGACAAAACAAGGATaGGCCAGTACTGGCATCTCA +
Preference number: 4 (lower is better)
Translates to: SLGSANVETLRTCWTHLGGTKQG*ASTGIS
Trigger: TGAGATGCCAGTACTGGCCCATCCTTGTTTTGTCCC...GCCCAGATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAGCACTCCCTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp CTGATGGAGCTGTCTGGAGACAGCTCCCTCTGTAAAAATCCCGACTTAAACACATTTAGGCCAGGCATGTaGAAGCACAGTGGGGTTAGC +
Preference number: 4 (lower is better)
Translates to: LMELSGDSSLCKNPDLNTFRPGM*KHSGVS
Trigger: GCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAA...TGTGTTTAAGTCGGGATTTTTACAGAGGGAGCTGTCTCCAGACAGCTCCATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp CCCATTTTAGGCCAGGCATGTGGAAGCACAGTGGGGTTAGCTACTGGGTTTCATTATCTGGCCTTTGCTTaGTTCCTGATGGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PILGQACGSTVGLATGFHYLAFA*FLMELS
Trigger: AGACAGCTCCATCAGGAACCAAGCAAAGGCCAGATA...ATGAAACCCAGTAGCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp GGTGACTTCCTGGCTGTCCTGGGGAAGCTCGTTGTTGAAACTGCTCTCTCCAAAAAAATGCTGCTTTTCTaGAGGGAGAAGCAGAACCAA +
Preference number: 4 (lower is better)
Translates to: GDFLAVLGKLVVETALSKKMLLF*REKQNQ
Trigger: TTGGTTCTGCTTCTCCCTGCAGAAAAGCAGCATTTT...TTTGGAGAGAGCAGTTTCAACAACGAGCTTCCCCAGGACAGCCAGGAAGTCACC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000674542.1
CDS-3UTR GCA 90 bp TTATTTACCCCTAAACAACAGCATAACTCAAATAATAATGACACACACGTCCCGTGCCCGACCTTAGGGTaGCTGGCCAGGCGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LFTPKQQHNSNNNDTHVPCPTLG*LARRRR
Trigger: TCTCCTCCGCCTGGCCAGGCACCCTAAGGTCGGGCA...CGGGACGTGTGTGTCATTATTATTTGAGTTATGCTGTTGTTTAGGGGTAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281938.7
CDS-3UTR GCA 90 bp CGTGCTGGACACATCTGGGCAGAGGGCAGAAGGCACTGTTTGTTTTTATGTGGTCAACCAAGCATGATTTaGCAATTGCGCTATCCTGTG +
Preference number: 4 (lower is better)
Translates to: RAGHIWAEGRRHCLFLCGQPSMI*QLRYPV
Trigger: CACAGGATAGCGCAATTGGCAAATCATGCTTGGTTG...ACCACATAAAAACAAACAGTGCCTTCTGCCCTCTGCCCAGATGTGTCCAGCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp AACGTGCTGGACACATCTGGGCAGAGGGCAGAAGGCACTGTTTGTTTTTATGTGCACCATCAACTCCTCTaGCTTGAAGCTGTGCACATT +
Preference number: 4 (lower is better)
Translates to: NVLDTSGQRAEGTVCFYVHHQLL*LEAVHI
Trigger: AATGTGCACAGCTTCAAGCCAGAGGAGTTGATGGTG...CACATAAAAACAAACAGTGCCTTCTGCCCTCTGCCCAGATGTGTCCAGCACGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp TTTAGGCCAGGCATGTGGAAGCACAGTGGGGTTAGCTACTGGGTTTCATTAACCTATCTGGCCTTTGCTTaGTTCCTGATGGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: FRPGMWKHSGVSYWVSLTYLAFA*FLMELS
Trigger: AGACAGCTCCATCAGGAACCAAGCAAAGGCCAGATA...GGTTAATGAAACCCAGTAGCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp ACAGGTGACTTCCTGGCTGTCCTGGGGAAGCTCGTTGTTGAAACTGCTCTCTCCCTATTACAGGTCTGCTaGGATATTTTCTCCTCGTTA +
Preference number: 4 (lower is better)
Translates to: TGDFLAVLGKLVVETALSLLQVC*DIFSSL
Trigger: TAACGAGGAGAAAATATCCCAGCAGACCTGTAATAG...GGAGAGAGCAGTTTCAACAACGAGCTTCCCCAGGACAGCCAGGAAGTCACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
3UTR CAA 72 bp AAAGTAATGTATCCTGGAATCAGAGAAGCCCTAGGGTaGGGGACAAAACAAGGATGGGCCAGTACTGGCATC +
Preference number: 4 (lower is better)
Translates to: KVMYPGIREALG*GTKQGWASTGI
Trigger: GATGCCAGTACTGGCCCATCCTTGTTTTGTCCCCAACCCTAGGGCTTCTCTGATTCCAGGATACATTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR TCA 90 bp TCCTTAGGGAGTGCTAATGTGGAAACTTTGAGAACGTGCTGGACACATCTGGGCCTAATGTGGAAACTTTaGGAACGTGCTGGACACATC +
Preference number: 4 (lower is better)
Translates to: SLGSANVETLRTCWTHLGLMWKL*ERAGHI
Trigger: GATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAG...GCCCAGATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAGCACTCCCTAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR TCA 90 bp CATATACACAATACCACTAGCCTATCTGTCAGGCTATCTGGCCTTTGCTTGGTTCCTTTGCTTGGTTCCTaGTGGAGCTGTCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: HIHNTTSLSVRLSGLCLVPLLGS*WSCLET
Trigger: TGTCTCCAGACAGCTCCATCAGGAACCAAGCAAAGG...AACCAAGCAAAGGCCAGATAGCCTGACAGATAGGCTAGTGGTATTGTGTATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp CCCATTTTAGGCCAGGCATGTGGAAGCACAGTGGGGTTAGCTACTGGGTTTCATAAAATGCTGCTTTTCTaGAGGGAGAAGCAGAACCAA +
Preference number: 4 (lower is better)
Translates to: PILGQACGSTVGLATGFHKMLLF*REKQNQ
Trigger: TTGGTTCTGCTTCTCCCTGCAGAAAAGCAGCATTTT...ATGAAACCCAGTAGCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp AATGTATCCTGGAATCAGAGAAGCCCTAGGGTTGGGGACAAAACAAGGATGGGCCAACCAAGCATGATTTaGCAATTGCGCTATCCTGTG +
Preference number: 4 (lower is better)
Translates to: NVSWNQRSPRVGDKTRMGQPSMI*QLRYPV
Trigger: CACAGGATAGCGCAATTGGCAAATCATGCTTGGTTG...GCCCATCCTTGTTTTGTCCCCAACCCTAGGGCTTCTCTGATTCCAGGATACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp TACACAATACCACTAGCCTATCTGTCAGGCTATCTGGCCTTTGCTTGGTTCCTGTCATTAACCAAACCATaGGGCATGGTTTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: YTIPLAYLSGYLAFAWFLSLTKP*GMVWEP
Trigger: TGGCTCCCAAACCATGCCGCATGGTTTGGTTAATGA...CAGGAACCAAGCAAAGGCCAGATAGCCTGACAGATAGGCTAGTGGTATTGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp GCAATCTATGTGCTCCCCCTTCTGGGACCCTATTACAGGTCTGCTGGGATATTTACCCTATTACAGGTCTaGTGGGATATTTTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: AIYVLPLLGPYYRSAGIFTLLQV*WDIFSS
Trigger: CGAGGAGAAAATATCCCAGCAGACCTGTAATAGGGT...AAATATCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAGATTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR CCA 90 bp CCCCTAAACAACAGCATAACTCAAATAATAATGACACACACGTCCCGCCCATATGGCTGTCAAGTCGTCTaGGAAGGGGTCCATGCCAAA +
Preference number: 4 (lower is better)
Translates to: PLNNSITQIIMTHTSRPYGCQVV*EGVHAK
Trigger: TTTGGCATGGACCCCTTCCCAGACGACTTGACAGCC...ATATGGGCGGGACGTGTGTGTCATTATTATTTGAGTTATGCTGTTGTTTAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp TGGGTTTCATTAACCAAACCATGCGGCATGGTTTGGGAGCCATGGGAATCGGGAACCTCTGCAGGAAGCTaGATTTTCTTTGTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: WVSLTKPCGMVWEPWESGTSAGS*IFFVKF
Trigger: GAACTTCACAAAGAAAATCCAGCTTCCTGCAGAGGT...TCCCGATTCCCATGGCTCCCAAACCATGCCGCATGGTTTGGTTAATGAAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281938.7
CDS-3UTR CCA 90 bp CCCATTTTAGGCCAGGCATGTGGAAGCACAGTGGGGTTAGCTACTGGGTTTCATAATTGCGCTATCCTGTaGAGAAATCTACCACTACAC +
Preference number: 4 (lower is better)
Translates to: PILGQACGSTVGLATGFHNCAIL*RNLPLH
Trigger: GTGTAGTGGTAGATTTCTCCACAGGATAGCGCAATT...ATGAAACCCAGTAGCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp AATCAGAGAAGCCCTAGGGTTGGGGACAAAACAAGGATGGGCCAGTACTGGCATAGTGGGGTTAGCTACTaGGTTTCATTAACCAAACCA +
Preference number: 4 (lower is better)
Translates to: NQRSPRVGDKTRMGQYWHSGVSY*VSLTKP
Trigger: TGGTTTGGTTAATGAAACCCAGTAGCTAACCCCACT...ATGCCAGTACTGGCCCATCCTTGTTTTGTCCCCAACCCTAGGGCTTCTCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp TGTGCTCCCCCTTCTGGGACCCTATTACAGGTCTGCTGGGATATTTTCTCCTCGCTATTACAGGTCTGCTaGGATATTTTCTCCTCGTTA +
Preference number: 4 (lower is better)
Translates to: CAPPSGTLLQVCWDIFSSLLQVC*DIFSSL
Trigger: TAACGAGGAGAAAATATCCCAGCAGACCTGTAATAG...CGAGGAGAAAATATCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR TCA 90 bp TTTGGCCTAACACAACCAAGCATGATTTGCCAATTGCGCTATCCTGTGGAGAAAGGGGAAGCTCGTTGTTaGAACTGCTCTCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: FGLTQPSMICQLRYPVEKGEARC*NCSLQM
Trigger: CATTTGGAGAGAGCAGTTTCAACAACGAGCTTCCCC...TTTCTCCACAGGATAGCGCAATTGGCAAATCATGCTTGGTTGTGTTAGGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp GCTAAAGTAATGTATCCTGGAATCAGAGAAGCCCTAGGGTTGGGGACAAAACAAAGGCTATCTGGCCTTTaGTTGGTTCCTGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: AKVMYPGIREALGLGTKQRLSGL*LVPDGA
Trigger: AGCTCCATCAGGAACCAAGCAAAGGCCAGATAGCCT...TTGTTTTGTCCCCAACCCTAGGGCTTCTCTGATTCCAGGATACATTACTTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp TTTGGCCTAACACAACCAAGCATGATTTGCCAATTGCGCTATCCTGTGGAGAAAGGGACAAAACAAGGATaGGCCAGTACTGGCATCTCA +
Preference number: 4 (lower is better)
Translates to: FGLTQPSMICQLRYPVEKGTKQG*ASTGIS
Trigger: TGAGATGCCAGTACTGGCCCATCCTTGTTTTGTCCC...TTTCTCCACAGGATAGCGCAATTGGCAAATCATGCTTGGTTGTGTTAGGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp GCGTCCTTAGGGAGTGCTAATGTGGAAACTTTGAGAACGTGCTGGACACATCTGAATTGCGCTATCCTGTaGAGAAATCTACCACTACAC +
Preference number: 4 (lower is better)
Translates to: ASLGSANVETLRTCWTHLNCAIL*RNLPLH
Trigger: GTGTAGTGGTAGATTTCTCCACAGGATAGCGCAATT...CAGATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAGCACTCCCTAAGGACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp AACAACAGCATAACTCAAATAATAATGACACACACGTCCCGCCCATATACACAACCATGCGGCATGGTTTaGGAGCCATGGGAATCGGGA +
Preference number: 4 (lower is better)
Translates to: NNSITQIIMTHTSRPYTQPCGMV*EPWESG
Trigger: TCCCGATTCCCATGGCTCCCAAACCATGCCGCATGG...TTGTGTATATGGGCGGGACGTGTGTGTCATTATTATTTGAGTTATGCTGTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp AATGTATCCTGGAATCAGAGAAGCCCTAGGGTTGGGGACAAAACAAGGATGGGCAGTGGGGTTAGCTACTaGGTTTCATTAACCAAACCA +
Preference number: 4 (lower is better)
Translates to: NVSWNQRSPRVGDKTRMGSGVSY*VSLTKP
Trigger: TGGTTTGGTTAATGAAACCCAGTAGCTAACCCCACT...GCCCATCCTTGTTTTGTCCCCAACCCTAGGGCTTCTCTGATTCCAGGATACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp GCTAAAGTAATGTATCCTGGAATCAGAGAAGCCCTAGGGTTGGGGACAAAACAAGAAACTTTGAGAACGTaGTGGACACATCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: AKVMYPGIREALGLGTKQETLRT*WTHLGR
Trigger: TCTGCCCAGATGTGTCCAGCACGTTCTCAAAGTTTC...TTGTTTTGTCCCCAACCCTAGGGCTTCTCTGATTCCAGGATACATTACTTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp CGTGCTGGACACATCTGGGCAGAGGGCAGAAGGCACTGTTTGTTTTTATGTGGTGCAAAACTAGTATTTTaGCCTAACACAACCAAGCAT +
Preference number: 4 (lower is better)
Translates to: RAGHIWAEGRRHCLFLCGAKLVF*PNTTKH
Trigger: ATGCTTGGTTGTGTTAGGCCAAAATACTAGTTTTGC...ACCACATAAAAACAAACAGTGCCTTCTGCCCTCTGCCCAGATGTGTCCAGCACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR TCA 90 bp AACAACAGCATAACTCAAATAATAATGACACACACGTCCCGCCCATATACACAAGGTCAGATCATAAACTaGCAGGCTCCCAGCGTCCTT +
Preference number: 4 (lower is better)
Translates to: NNSITQIIMTHTSRPYTQGQIIN*QAPSVL
Trigger: AAGGACGCTGGGAGCCTGTCAGTTTATGATCTGACC...TTGTGTATATGGGCGGGACGTGTGTGTCATTATTATTTGAGTTATGCTGTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp TTTTGGCCTAACACAACCAAGCATGATTTGCCAATTGCGCTATCCTGTGGAGAATCTGGCTTGAAGCTGTaGACATTCACACACACTTTC +
Preference number: 4 (lower is better)
Translates to: FWPNTTKHDLPIALSCGESGLKL*TFTHTF
Trigger: GAAAGTGTGTGTGAATGTGCACAGCTTCAAGCCAGA...TTCTCCACAGGATAGCGCAATTGGCAAATCATGCTTGGTTGTGTTAGGCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CCA 90 bp TTATTTACCCCTAAACAACAGCATAACTCAAATAATAATGACACACACGTCCCGTATCCAGGGAATCTGTaGTCAGTCCTCACCCCCGCA +
Preference number: 4 (lower is better)
Translates to: LFTPKQQHNSNNNDTHVPYPGNL*SVLTPA
Trigger: TGCGGGGGTGAGGACTGACCACAGATTCCCTGGATA...CGGGACGTGTGTGTCATTATTATTTGAGTTATGCTGTTGTTTAGGGGTAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281938.7
CDS-3UTR CCA 90 bp TTTAGGCCAGGCATGTGGAAGCACAGTGGGGTTAGCTACTGGGTTTCATTAACCGCAAAACTAGTATTTTaGCCTAACACAACCAAGCAT +
Preference number: 4 (lower is better)
Translates to: FRPGMWKHSGVSYWVSLTAKLVF*PNTTKH
Trigger: ATGCTTGGTTGTGTTAGGCCAAAATACTAGTTTTGC...GGTTAATGAAACCCAGTAGCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR TCA 90 bp TTATTTACCCCTAAACAACAGCATAACTCAAATAATAATGACACACACGTCCCGGGTCAGATCATAAACTaGCAGGCTCCCAGCGTCCTT +
Preference number: 4 (lower is better)
Translates to: LFTPKQQHNSNNNDTHVPGQIIN*QAPSVL
Trigger: AAGGACGCTGGGAGCCTGTCAGTTTATGATCTGACC...CGGGACGTGTGTGTCATTATTATTTGAGTTATGCTGTTGTTTAGGGGTAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281938.7
CDS-3UTR GCA 90 bp AGCATAACTCAAATAATAATGACACACACGTCCCGCCCATATACACAATACCACAGCTTCCGAAAATGCTaGTTTTCTGCAGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SITQIIMTHTSRPYTQYHSFRKC*FSAGRS
Trigger: GCTTCTCCCTGCAGAAAAGCAGCATTTTCGGAAGCT...GTGGTATTGTGTATATGGGCGGGACGTGTGTGTCATTATTATTTGAGTTATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR CAA 72 bp TATTTTGGCCTAACACAACCAAGCATGATTTGCCAATaGCGCTATCCTGTGGAGAAATCTACCACTACACTA +
Preference number: 4 (lower is better)
Translates to: YFGLTQPSMICQ*RYPVEKSTTTL
Trigger: TAGTGTAGTGGTAGATTTCTCCACAGGATAGCGCAATTGGCAAATCATGCTTGGTTGTGTTAGGCCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
3UTR CAA 72 bp AAACTAGTATTTTGGCCTAACACAACCAAGCATGATTaGCCAATTGCGCTATCCTGTGGAGAAATCTACCAC +
Preference number: 4 (lower is better)
Translates to: KLVFWPNTTKHD*PIALSCGEIYH
Trigger: GTGGTAGATTTCTCCACAGGATAGCGCAATTGGCAAATCATGCTTGGTTGTGTTAGGCCAAAATACTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR GCA 90 bp TTATTTACCCCTAAACAACAGCATAACTCAAATAATAATGACACACACGTCCCGCACAGGATCCACCTCTaGAGGAAGCTGGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: LFTPKQQHNSNNNDTHVPHRIHL*RKLDFL
Trigger: AAGAAAATCCAGCTTCCTGCAGAGGTGGATCCTGTG...CGGGACGTGTGTGTCATTATTATTTGAGTTATGCTGTTGTTTAGGGGTAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281938.7
CDS-3UTR GCA 90 bp GCTAAAGTAATGTATCCTGGAATCAGAGAAGCCCTAGGGTTGGGGACAAAACAACCCTTTTATGTGTTTTaGAACTATAGAATGTGCAAC +
Preference number: 4 (lower is better)
Translates to: AKVMYPGIREALGLGTKQPFYVF*NYRMCN
Trigger: GTTGCACATTCTATAGTTGCAAAACACATAAAAGGG...TTGTTTTGTCCCCAACCCTAGGGCTTCTCTGATTCCAGGATACATTACTTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS GCA 90 bp CTCACGACAGACCGGCAAGCCACCGTCCTCCCAGGCTTCCCAGGCTaGCCAGGCTGGCAGCCAGAACCGCTGAGGTCTAGAGCGGAGCCA +
Preference number: 5 (lower is better)
Translates to: LTTDRQATVLPGFPG*PGWQPEPLRSRAEP
Trigger: TGGCTCCGCTCTAGACCTCAGCGGTTCTGGCTGCCAGCCTGGGCAGCCTGGGAAGCCTGGGAGGACGGTGGCTTGCCGGTCTGTCGTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS CCA 90 bp AGAGGAGAGGGGAGAGTCCCGGAAGGGGTCTCGGCGCAGGCGGCTTaGGTAGTGGCAGGAGAAGGGCATCTGACCGTCAGCCATGGTGGC +
Preference number: 5 (lower is better)
Translates to: RGEGRVPEGVSAQAA*VVAGEGHLTVSHGG
Trigger: GCCACCATGGCTGACGGTCAGATGCCCTTCTCCTGCCACTACCCAAGCCGCCTGCGCCGAGACCCCTTCCGGGACTCTCCCCTCTCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS GCA 90 bp CCCAGTCGGGCCAAGAGGCTGTCAAGTCGTCTGGGAAGGGGTCCATaGCAAAGCCATCATCCAGCAGGCGAGAGGAGAGGGGAGAGTCCC +
Preference number: 5 (lower is better)
Translates to: PSRAKRLSSRLGRGP*QSHHPAGERRGESP
Trigger: GGGACTCTCCCCTCTCCTCTCGCCTGCTGGATGATGGCTTTGGCATGGACCCCTTCCCAGACGACTTGACAGCCTCTTGGCCCGACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CAA 90 bp GTTTGGGAGCCATGGGAATCGGGAGCCCAGAGTAGGAACCTGGGTGATGGGGGACACTGCCAGGGACGGTaGTGTCCCCTCGACTGGGGT +
Preference number: 5 (lower is better)
Translates to: VWEPWESGAQSRNLGDGGHCQGR*CPLDWG
Trigger: ACCCCAGTCGAGGGGACACAACCGTCCCTGGCAGTG...TCCCCCATCACCCAGGTTCCTACTCTGGGCTCCCGATTCCCATGGCTCCCAAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS CCA 90 bp GAGACGAGGCAGAGCCCAGTCGGGCCAAGAGGCTGTCAAGTCGTCTaGGAAGGGGTCCATGCCAAAGCCATCATCCAGCAGGCGAGAGGA +
Preference number: 5 (lower is better)
Translates to: ETRQSPVGPRGCQVV*EGVHAKAIIQQARG
Trigger: TCCTCTCGCCTGCTGGATGATGGCTTTGGCATGGACCCCTTCCCAGACGACTTGACAGCCTCTTGGCCCGACTGGGCTCTGCCTCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CAA 90 bp CACGTCCCGCCCATATACACAATACCACTAGCCTATCTGTCAGGCTATCTGGCCCACTGCCAGGGACGGTaGTGTCCCCTCGACTGGGGT +
Preference number: 5 (lower is better)
Translates to: HVPPIYTIPLAYLSGYLAHCQGR*CPLDWG
Trigger: ACCCCAGTCGAGGGGACACAACCGTCCCTGGCAGTG...GGCCAGATAGCCTGACAGATAGGCTAGTGGTATTGTGTATATGGGCGGGACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CAA 90 bp AACGTGCTGGACACATCTGGGCAGAGGGCAGAAGGCACTGTTTGTTTTTATGTGCTCGGCGCAGGCGGCTaGGGTAGTGGCAGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: NVLDTSGQRAEGTVCFYVLGAGG*GSGRRR
Trigger: CCTTCTCCTGCCACTACCCAAGCCGCCTGCGCCGAG...CACATAAAAACAAACAGTGCCTTCTGCCCTCTGCCCAGATGTGTCCAGCACGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CAA 90 bp TCCTTAGGGAGTGCTAATGTGGAAACTTTGAGAACGTGCTGGACACATCTGGGCCTCGGCGCAGGCGGCTaGGGTAGTGGCAGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: SLGSANVETLRTCWTHLGLGAGG*GSGRRR
Trigger: CCTTCTCCTGCCACTACCCAAGCCGCCTGCGCCGAG...GCCCAGATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAGCACTCCCTAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS TCA 90 bp AGGGACCTGGGGAGCTTCGATGATCAGCAGACCCTCTGGGGAAAGTaGGGCAAATACTGTCACAGGATCCACAGAGGGTCTCCTAGAGGG +
Preference number: 5 (lower is better)
Translates to: RDLGSFDDQQTLWGK*GKYCHRIHRGSPRG
Trigger: CCCTCTAGGAGACCCTCTGTGGATCCTGTGACAGTATTTGCCTCACTTTCCCCAGAGGGTCTGCTGATCATCGAAGCTCCCCAGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675900.1
CDS TCA 90 bp AGTGTGGCGTGTCAGCATCTATGTTCCTTGGGCATCCTTCAGGACTaGGGCTTGGGTTCAAATCCTGGCCCTGGACCTGCCTTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: SVACQHLCSLGILQD*GLGSNPGPGPALLC
Trigger: ACACAGCAAGGCAGGTCCAGGGCCAGGATTTGAACCCAAGCCTCAGTCCTGAAGGATGCCCAAGGAACATAGATGCTGACACGCCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542496.1
CDS-3UTR CAA 90 bp CGTGCTGGACACATCTGGGCAGAGGGCAGAAGGCACTGTTTGTTTTTATGTGGTACCATGCGGCATGGTTaGGGAGCCATGGGAATCGGG +
Preference number: 5 (lower is better)
Translates to: RAGHIWAEGRRHCLFLCGTMRHG*GAMGIG
Trigger: CCCGATTCCCATGGCTCCCAAACCATGCCGCATGGT...ACCACATAAAAACAAACAGTGCCTTCTGCCCTCTGCCCAGATGTGTCCAGCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS CCA 90 bp TTCCTAACTCTGAGCCCAGACGTCGTTCTCCCTTTGTTTCCAACATaGAAACTGAGGCTTGGTGATGGATCCAGGGTCGCCCAGCAGGTC +
Preference number: 5 (lower is better)
Translates to: FLTLSPDVVLPLFPT*KLRLGDGSRVAQQV
Trigger: GACCTGCTGGGCGACCCTGGATCCATCACCAAGCCTCAGTTTCCATGTTGGAAACAAAGGGAGAACGACGTCTGGGCTCAGAGTTAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674715.1
CDS-3UTR CAA 90 bp CAGGTGACTTCCTGGCTGTCCTGGGGAAGCTCGTTGTTGAAACTGCTCTCTCCATCCTGGGGAAGCTCGTaGTTGAAACTGCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: QVTSWLSWGSSLLKLLSPSWGSS*LKLLSP
Trigger: TGGAGAGAGCAGTTTCAACAACGAGCTTCCCCAGGA...TGGAGAGAGCAGTTTCAACAACGAGCTTCCCCAGGACAGCCAGGAAGTCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674542.1
ENST00000675110.1
ENST00000675211.1
CDS-3UTR CAA 90 bp GTCAGGCTATCTGGCCTTTGCTTGGTTCCTGATGGAGCTGTCTGGAGACAGCTCAGAGAAGCCCTAGGGTaGGGGACAAAACAAGGATGG +
Preference number: 5 (lower is better)
Translates to: VRLSGLCLVPDGAVWRQLREALG*GTKQGW
Trigger: CCATCCTTGTTTTGTCCCCAACCCTAGGGCTTCTCT...GAGCTGTCTCCAGACAGCTCCATCAGGAACCAAGCAAAGGCCAGATAGCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS GCA 90 bp TATCCATCTTTGGTCTTCACCATCAACTCCTCTGGCTTGAAGCTGTaGACATTCACACACACTTTCCAGGGCTCCCCAGGGAAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: YPSLVFTINSSGLKL*TFTHTFQGSPGKGG
Trigger: CCCACCCTTCCCTGGGGAGCCCTGGAAAGTGTGTGTGAATGTGCACAGCTTCAAGCCAGAGGAGTTGATGGTGAAGACCAAAGATGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CAA 90 bp TGTGCTCCCCCTTCTGGGACCCTATTACAGGTCTGCTGGGATATTTTCTCCTCGTGCTCTCTCCAAATGTaGAGTAAGGAGGGACCTGGG +
Preference number: 5 (lower is better)
Translates to: CAPPSGTLLQVCWDIFSSCSLQM*SKEGPG
Trigger: CCCAGGTCCCTCCTTACTCAACATTTGGAGAGAGCA...CGAGGAGAAAATATCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR CAA 90 bp TGTGCTCCCCCTTCTGGGACCCTATTACAGGTCTGCTGGGATATTTTCTCCTCGTCCTGGGGAAGCTCGTaGTTGAAACTGCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: CAPPSGTLLQVCWDIFSSSWGSS*LKLLSP
Trigger: TGGAGAGAGCAGTTTCAACAACGAGCTTCCCCAGGA...CGAGGAGAAAATATCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR CAA 90 bp ACCTGGGGAGCTTCGATGATCAGCAGACCCTCTGGGGAAAGTGAGGCAAATACTAGAGAAGCCCTAGGGTaGGGGACAAAACAAGGATGG +
Preference number: 5 (lower is better)
Translates to: TWGASMISRPSGESEANTREALG*GTKQGW
Trigger: CCATCCTTGTTTTGTCCCCAACCCTAGGGCTTCTCT...AGTATTTGCCTCACTTTCCCCAGAGGGTCTGCTGATCATCGAAGCTCCCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000674542.1
CDS-3UTR CAA 90 bp ACCCATTTTAGGCCAGGCATGTGGAAGCACAGTGGGGTTAGCTACTGGGTTTCATGCTCTCTCCAAATGTaGAGTAAGGAGGGACCTGGG +
Preference number: 5 (lower is better)
Translates to: THFRPGMWKHSGVSYWVSCSLQM*SKEGPG
Trigger: CCCAGGTCCCTCCTTACTCAACATTTGGAGAGAGCA...TGAAACCCAGTAGCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAAATGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CAA 90 bp ATGATGCAATCTATGTGCTCCCCCTTCTGGGACCCTATTACAGGTCTGCTGGGATGCTCTCTCCAAATGTaGAGTAAGGAGGGACCTGGG +
Preference number: 5 (lower is better)
Translates to: MMQSMCSPFWDPITGLLGCSLQM*SKEGPG
Trigger: CCCAGGTCCCTCCTTACTCAACATTTGGAGAGAGCA...TCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAGATTGCATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS GCA 90 bp GGAAGCCTCACAGGGCACCGAGCAGATGAGATGATGCAATCTATGTaGTCCCCCTTCTGGGACCCTATTACAGGTCTGTGGATTTTCTTT +
Preference number: 5 (lower is better)
Translates to: GSLTGHRADEMMQSM*SPFWDPITGLWIFF
Trigger: AAAGAAAATCCACAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAGATTGCATCATCTCATCTGCTCGGTGCCCTGTGAGGCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674763.1
CDS CCA 90 bp TGCAATCTATGTGCTCCCCCTTCTGGGACCCTATTACAGGTCTGCTaGGATATTTTCTCCTCGTTAGGTGTGAGGGTTCAATTCCCTGCC +
Preference number: 5 (lower is better)
Translates to: CNLCAPPSGTLLQVC*DIFSSLGVRVQFPA
Trigger: GGCAGGGAATTGAACCCTCACACCTAACGAGGAGAAAATATCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAGATTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675211.1
CDS-3UTR CAA 90 bp TCCTTAGGGAGTGCTAATGTGGAAACTTTGAGAACGTGCTGGACACATCTGGGCTGCTCTCTCCAAATGTaGAGTAAGGAGGGACCTGGG +
Preference number: 5 (lower is better)
Translates to: SLGSANVETLRTCWTHLGCSLQM*SKEGPG
Trigger: CCCAGGTCCCTCCTTACTCAACATTTGGAGAGAGCA...GCCCAGATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAGCACTCCCTAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CAA 90 bp AATGTATCCTGGAATCAGAGAAGCCCTAGGGTTGGGGACAAAACAAGGATGGGCTCCTGGGGAAGCTCGTaGTTGAAACTGCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: NVSWNQRSPRVGDKTRMGSWGSS*LKLLSP
Trigger: TGGAGAGAGCAGTTTCAACAACGAGCTTCCCCAGGA...GCCCATCCTTGTTTTGTCCCCAACCCTAGGGCTTCTCTGATTCCAGGATACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CAA 90 bp CTATGTGCTCCCCCTTCTGGGACCCTATTACAGGTCTGCTGGGATATTTTCTCCTGGGGAAGCTCGTTGTaGAAACTGCTCTCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: LCAPPSGTLLQVCWDIFSWGSSL*KLLSPN
Trigger: ATTTGGAGAGAGCAGTTTCAACAACGAGCTTCCCCA...GGAGAAAATATCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR CAA 90 bp ACCTGGGGAGCTTCGATGATCAGCAGACCCTCTGGGGAAAGTGAGGCAAATACTGCTAATGTGGAAACTTaGAGAACGTGCTGGACACAT +
Preference number: 5 (lower is better)
Translates to: TWGASMISRPSGESEANTANVET*RTCWTH
Trigger: ATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAGC...AGTATTTGCCTCACTTTCCCCAGAGGGTCTGCTGATCATCGAAGCTCCCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674542.1
CDS TCA 90 bp AGCTTTGAATCAGCTCTCTCTGAGTCTAGGCCAAGTTCTAGGTCCTaGTGCCTCTCTGCTCTTGAATTTCTGTCTGTTCCAGCTCCCGAT +
Preference number: 5 (lower is better)
Translates to: SFESALSESRPSSRS*CLSALEFLSVPAPD
Trigger: ATCGGGAGCTGGAACAGACAGAAATTCAAGAGCAGAGAGGCATCAGGACCTAGAACTTGGCCTAGACTCAGAGAGAGCTGATTCAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674715.1
CDS CCA 90 bp TGCAATCTATGTGCTCCCCCTTCTGGGACCCTATTACAGGTCTGCTaGGATATTTTCTCCTCGTTAGGTGTGAGGGTTCAATTCCTGGAT +
Preference number: 5 (lower is better)
Translates to: CNLCAPPSGTLLQVC*DIFSSLGVRVQFLD
Trigger: ATCCAGGAATTGAACCCTCACACCTAACGAGGAGAAAATATCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAGATTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675110.1
CDS-3UTR CAA 90 bp CCCATTTTAGGCCAGGCATGTGGAAGCACAGTGGGGTTAGCTACTGGGTTTCATACAACCAAGCATGATTaGCCAATTGCGCTATCCTGT +
Preference number: 5 (lower is better)
Translates to: PILGQACGSTVGLATGFHTTKHD*PIALSC
Trigger: ACAGGATAGCGCAATTGGCAAATCATGCTTGGTTGT...ATGAAACCCAGTAGCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS CCA 90 bp GGGCACCGAGCAGATGAGATGATGCAATCTATGTGCTCCCCCTTCTaGGACCCTATTACAGGTCTGTGGATTTTCTTTGTGAAGTTCTTA +
Preference number: 5 (lower is better)
Translates to: GHRADEMMQSMCSPF*DPITGLWIFFVKFL
Trigger: TAAGAACTTCACAAAGAAAATCCACAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAGATTGCATCATCTCATCTGCTCGGTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674763.1
CDS-3UTR CAA 90 bp CAATCTATGTGCTCCCCCTTCTGGGACCCTATTACAGGTCTGCTGGGATATTTTTGGGGAAGCTCGTTGTaGAAACTGCTCTCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: QSMCSPFWDPITGLLGYFWGSSL*KLLSPN
Trigger: ATTTGGAGAGAGCAGTTTCAACAACGAGCTTCCCCA...AAAATATCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS-3UTR CAA 90 bp TTTAGGCCAGGCATGTGGAAGCACAGTGGGGTTAGCTACTGGGTTTCATTAACCACAACCAAGCATGATTaGCCAATTGCGCTATCCTGT +
Preference number: 5 (lower is better)
Translates to: FRPGMWKHSGVSYWVSLTTTKHD*PIALSC
Trigger: ACAGGATAGCGCAATTGGCAAATCATGCTTGGTTGT...GGTTAATGAAACCCAGTAGCTAACCCCACTGTGCTTCCACATGCCTGGCCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CAA 90 bp AACAACAGCATAACTCAAATAATAATGACACACACGTCCCGCCCATATACACAAACCATGCGGCATGGTTaGGGAGCCATGGGAATCGGG +
Preference number: 5 (lower is better)
Translates to: NNSITQIIMTHTSRPYTQTMRHG*GAMGIG
Trigger: CCCGATTCCCATGGCTCCCAAACCATGCCGCATGGT...TTGTGTATATGGGCGGGACGTGTGTGTCATTATTATTTGAGTTATGCTGTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CAA 90 bp GCCTTTGCTTGGTTCCTGATGGAGCTGTCTGGAGACAGCTCCCTCTGTAAAAATGCTAATGTGGAAACTTaGAGAACGTGCTGGACACAT +
Preference number: 5 (lower is better)
Translates to: AFAWFLMELSGDSSLCKNANVET*RTCWTH
Trigger: ATGTGTCCAGCACGTTCTCAAAGTTTCCACATTAGC...ATTTTTACAGAGGGAGCTGTCTCCAGACAGCTCCATCAGGAACCAAGCAAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CAA 90 bp TTTTGGCCTAACACAACCAAGCATGATTTGCCAATTGCGCTATCCTGTGGAGAACTATCTGGCCTTTGCTaGGTTCCTGATGGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: FWPNTTKHDLPIALSCGELSGLC*VPDGAV
Trigger: GACAGCTCCATCAGGAACCAAGCAAAGGCCAGATAG...TTCTCCACAGGATAGCGCAATTGGCAAATCATGCTTGGTTGTGTTAGGCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CAA 90 bp ACCCCTAAACAACAGCATAACTCAAATAATAATGACACACACGTCCCGCCCATATCCTGGGGAAGCTCGTaGTTGAAACTGCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: TPKQQHNSNNNDTHVPPISWGSS*LKLLSP
Trigger: TGGAGAGAGCAGTTTCAACAACGAGCTTCCCCAGGA...TATGGGCGGGACGTGTGTGTCATTATTATTTGAGTTATGCTGTTGTTTAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CAA 90 bp CATATACACAATACCACTAGCCTATCTGTCAGGCTATCTGGCCTTTGCTTGGTTTGGGGAAGCTCGTTGTaGAAACTGCTCTCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: HIHNTTSLSVRLSGLCLVWGSSL*KLLSPN
Trigger: ATTTGGAGAGAGCAGTTTCAACAACGAGCTTCCCCA...AACCAAGCAAAGGCCAGATAGCCTGACAGATAGGCTAGTGGTATTGTGTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS-3UTR CAA 90 bp ACCCCTAAACAACAGCATAACTCAAATAATAATGACACACACGTCCCGCCCATATGGGGAAGCTCGTTGTaGAAACTGCTCTCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: TPKQQHNSNNNDTHVPPIWGSSL*KLLSPN
Trigger: ATTTGGAGAGAGCAGTTTCAACAACGAGCTTCCCCA...TATGGGCGGGACGTGTGTGTCATTATTATTTGAGTTATGCTGTTGTTTAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS GCA 90 bp ACCTTCTCACCTGCTGCCTGTTTACTTGTTCCCTCATCACGTGTTTaGTTAAGCTTAGATCCAGTTGTATTATGTTCCTGGATTTTCTTT +
Preference number: 5 (lower is better)
Translates to: TFSPAACLLVPSSRV*LSLDPVVLCSWIFF
Trigger: AAAGAAAATCCAGGAACATAATACAACTGGATCTAAGCTTAAGCAAACACGTGATGAGGGAACAAGTAAACAGGCAGCAGGTGAGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675573.1
CDS-3UTR CAA 90 bp CCCCTAAACAACAGCATAACTCAAATAATAATGACACACACGTCCCGCCCATATAACAATGCCACCTTCTaGCTGTTTCTCTTCATGTTT +
Preference number: 5 (lower is better)
Translates to: PLNNSITQIIMTHTSRPYNNATF*LFLFMF
Trigger: AAACATGAAGAGAAACAGCAAGAAGGTGGCATTGTT...ATATGGGCGGGACGTGTGTGTCATTATTATTTGAGTTATGCTGTTGTTTAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281938.7
CDS GCA 90 bp GTAACGATTTTGTCTGCCTGTTTACTTGTTCCCTCATCACGTGTTTaGTTAAGCTTAGATCCAGTTGTATTATGTTCCTGGATTTTCTTT +
Preference number: 5 (lower is better)
Translates to: VTILSACLLVPSSRV*LSLDPVVLCSWIFF
Trigger: AAAGAAAATCCAGGAACATAATACAACTGGATCTAAGCTTAAGCAAACACGTGATGAGGGAACAAGTAAACAGGCAGACAAAATCGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541798.1
CDS CAA 72 bp GGGGAGAGTCCCGGAAGGGGTCTCGGCGCAGGCGGCTaGGGTAGTGGCAGGAGAAGGGCATCTGACCGTCAG +
Preference number: 6 (lower is better)
Translates to: GESPGRGLGAGG*GSGRRRASDRQ
Trigger: CTGACGGTCAGATGCCCTTCTCCTGCCACTACCCAAGCCGCCTGCGCCGAGACCCCTTCCGGGACTCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS CAA 90 bp GAGAGGAGAGGGGAGAGTCCCGGAAGGGGTCTCGGCGCAGGCGGCTaGGGTAGTGGCAGGAGAAGGGCATCTGACCGTCAGCCATGGTGG +
Preference number: 6 (lower is better)
Translates to: ERRGESPGRGLGAGG*GSGRRRASDRQPWW
Trigger: CCACCATGGCTGACGGTCAGATGCCCTTCTCCTGCCACTACCCAAGCCGCCTGCGCCGAGACCCCTTCCGGGACTCTCCCCTCTCCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS GCA 72 bp AGATCCAGCAGAATCCCAGAGGGTCCCCGTCCGCACTaGCTCACGACAGACCGGCAAGCCACCGTCCTCCCA +
Preference number: 6 (lower is better)
Translates to: RSSRIPEGPRPH*LTTDRQATVLP
Trigger: TGGGAGGACGGTGGCTTGCCGGTCTGTCGTGAGGCAGTGCGGACGGGGACCCTCTGGGATTCTGCTGGATCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS CCA 72 bp CAGAGCCCAGTCGGGCCAAGAGGCTGTCAAGTCGTCTaGGAAGGGGTCCATGCCAAAGCCATCATCCAGCAG +
Preference number: 6 (lower is better)
Translates to: QSPVGPRGCQVV*EGVHAKAIIQQ
Trigger: CTGCTGGATGATGGCTTTGGCATGGACCCCTTCCCAGACGACTTGACAGCCTCTTGGCCCGACTGGGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS CAA 72 bp AACCCTGGGTCTGACATCCCAGACTGGATGGCAGGCTaGAAGCGGGGTCACATGCTGAGGGCGACTCTGCCA +
Preference number: 6 (lower is better)
Translates to: NPGSDIPDWMAG*KRGHMLRATLP
Trigger: TGGCAGAGTCGCCCTCAGCATGTGACCCCGCTTCAAGCCTGCCATCCAGTCTGGGATGTCAGACCCAGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674715.1
CDS CCA 72 bp GGTAGTGGCAGGAGAAGGGCATCTGACCGTCAGCCATaGTGGCTGCTCAGCTCAGAGAGAAACAGAGGCTCA +
Preference number: 6 (lower is better)
Translates to: GSGRRRASDRQP*WLLSSERNRGS
Trigger: TGAGCCTCTGTTTCTCTCTGAGCTGAGCAGCCACCATGGCTGACGGTCAGATGCCCTTCTCCTGCCACTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS CCA 72 bp CTGAGCCCAGACGTCGTTCTCCCTTTGTTTCCAACATaGAAACTGAGGCTTGGTGATGGATCCAGGGTCGCC +
Preference number: 6 (lower is better)
Translates to: LSPDVVLPLFPT*KLRLGDGSRVA
Trigger: GGCGACCCTGGATCCATCACCAAGCCTCAGTTTCCATGTTGGAAACAAAGGGAGAACGACGTCTGGGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674715.1
CDS TCA 72 bp GGGAGCTTCGATGATCAGCAGACCCTCTGGGGAAAGTaGGGCAAATACTGTCACAGGATCCACAGAGGGTCT +
Preference number: 6 (lower is better)
Translates to: GSFDDQQTLWGK*GKYCHRIHRGS
Trigger: AGACCCTCTGTGGATCCTGTGACAGTATTTGCCTCACTTTCCCCAGAGGGTCTGCTGATCATCGAAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675900.1
CDS GCA 72 bp TTGGTCTTCACCATCAACTCCTCTGGCTTGAAGCTGTaGACATTCACACACACTTTCCAGGGCTCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: LVFTINSSGLKL*TFTHTFQGSPG
Trigger: CCCTGGGGAGCCCTGGAAAGTGTGTGTGAATGTGCACAGCTTCAAGCCAGAGGAGTTGATGGTGAAGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS GCA 72 bp ACAGGGCACCGAGCAGATGAGATGATGCAATCTATGTaGTCCCCCTTCTGGGACCCTATTACAGGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: TGHRADEMMQSM*SPFWDPITGLW
Trigger: CCACAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAGATTGCATCATCTCATCTGCTCGGTGCCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674763.1
CDS CCA 72 bp CCACCTGCCCAAGGTCACACAACAAGGTGGTGTGGCTaGGCTAGCTTATTCTTCAGCTTCCGAAAATGCTGC +
Preference number: 6 (lower is better)
Translates to: PPAQGHTTRWCG*ASLFFSFRKCC
Trigger: GCAGCATTTTCGGAAGCTGAAGAATAAGCTAGCCCAGCCACACCACCTTGTTGTGTGACCTTGGGCAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS GCA 72 bp GGCTGGGCTAGCTTATTCTTCAGCTTCCGAAAATGCTaGTTTTCTGCAGGGAGAAGCAGAACCAACCACTGC +
Preference number: 6 (lower is better)
Translates to: GWASLFFSFRKC*FSAGRSRTNHC
Trigger: GCAGTGGTTGGTTCTGCTTCTCCCTGCAGAAAAGCAGCATTTTCGGAAGCTGAAGAATAAGCTAGCCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000674542.1
CDS GCA 72 bp CTATGTGCTCCCCCTTCTGGGACCCTATTACAGGTCTaGTGGGATATTTTCTCCTCGTTAGGTGTGAGGGTT +
Preference number: 6 (lower is better)
Translates to: LCAPPSGTLLQV*WDIFSSLGVRV
Trigger: AACCCTCACACCTAACGAGGAGAAAATATCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS CCA 72 bp TGTGCTCCCCCTTCTGGGACCCTATTACAGGTCTGCTaGGATATTTTCTCCTCGTTAGGTGTGAGGGTTCAA +
Preference number: 6 (lower is better)
Translates to: CAPPSGTLLQVC*DIFSSLGVRVQ
Trigger: TTGAACCCTCACACCTAACGAGGAGAAAATATCCCAGCAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675110.1
ENST00000675211.1
CDS CCA 72 bp GGAAGAAAAGTGTGGCGTGTCAGCATCTATGTTCCTTaGGCATCCTTCAGGACTGAGGCTTGGGTTCAAATC +
Preference number: 6 (lower is better)
Translates to: GRKVWRVSIYVP*ASFRTEAWVQI
Trigger: GATTTGAACCCAAGCCTCAGTCCTGAAGGATGCCCAAGGAACATAGATGCTGACACGCCACACTTTTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542496.1
CDS CAA 72 bp GCTTTCCTAACTCTGAGCCCAGACGTCGTTCTCCCTTaGTTTCCAACATGGAAACTGAGGCTTGGTGATGGA +
Preference number: 6 (lower is better)
Translates to: AFLTLSPDVVLP*FPTWKLRLGDG
Trigger: TCCATCACCAAGCCTCAGTTTCCATGTTGGAAACAAAGGGAGAACGACGTCTGGGCTCAGAGTTAGGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674715.1
CDS CCA 72 bp CACGTATCCATCTTTGGTCTTCACCATCAACTCCTCTaGCTTGAAGCTGTGCACATTCACACACACTTTCCA +
Preference number: 6 (lower is better)
Translates to: HVSIFGLHHQLL*LEAVHIHTHFP
Trigger: TGGAAAGTGTGTGTGAATGTGCACAGCTTCAAGCCAGAGGAGTTGATGGTGAAGACCAAAGATGGATACGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281938.7
ENST00000541798.1
ENST00000674542.1
CDS CCA 72 bp GCAGATGAGATGATGCAATCTATGTGCTCCCCCTTCTaGGACCCTATTACAGGTCTGTGGATTTTCTTTGTG +
Preference number: 6 (lower is better)
Translates to: ADEMMQSMCSPF*DPITGLWIFFV
Trigger: CACAAAGAAAATCCACAGACCTGTAATAGGGTCCCAGAAGGGGGAGCACATAGATTGCATCATCTCATCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674763.1
CDS CAA 72 bp TTGCCTGTGACCTGGAAAACCCCTCCCTGCTTCAAGTaGTCCTGCATTTCTAGATCGAACCAATGTACTTCT +
Preference number: 6 (lower is better)
Translates to: LPVTWKTPPCFK*SCISRSNQCTS
Trigger: AGAAGTACATTGGTTCGATCTAGAAATGCAGGACAACTTGAAGCAGGGAGGGGTTTTCCAGGTCACAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676071.1
CDS GCA 72 bp CCTGCTGCCTGTTTACTTGTTCCCTCATCACGTGTTTaGTTAAGCTTAGATCCAGTTGTATTATGTTCCTGG +
Preference number: 6 (lower is better)
Translates to: PAACLLVPSSRV*LSLDPVVLCSW
Trigger: CCAGGAACATAATACAACTGGATCTAAGCTTAAGCAAACACGTGATGAGGGAACAAGTAAACAGGCAGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675573.1
CDS GCA 72 bp TTCTTTGTGAAGTTCTTAGAAACAATGCCACCTTCTTaGTGTTTCTCTTCATGTTTGCCAGACACCTCCACG +
Preference number: 6 (lower is better)
Translates to: FFVKFLETMPPS*CFSSCLPDTST
Trigger: CGTGGAGGTGTCTGGCAAACATGAAGAGAAACAGCAAGAAGGTGGCATTGTTTCTAAGAACTTCACAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281938.7
ENST00000541798.1
CDS GCA 72 bp TTGTCTGCCTGTTTACTTGTTCCCTCATCACGTGTTTaGTTAAGCTTAGATCCAGTTGTATTATGTTCCTGG +
Preference number: 6 (lower is better)
Translates to: LSACLLVPSSRV*LSLDPVVLCSW
Trigger: CCAGGAACATAATACAACTGGATCTAAGCTTAAGCAAACACGTGATGAGGGAACAAGTAAACAGGCAGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541798.1