Pregenerated sensors for HSPB6 (Homo sapiens)
Ensembl gene IDs: ENSG00000004776Ensembl transcript IDs: ENST00000004982.6, ENST00000587965.1, ENST00000592984.6
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGCGGCCCAGCCCCCTCCTACTTGGCTGCGGCTGGCGGTGGGGCCTaGGCCGACGCTGGTGCGGCCTGGATGGACAGGACGCCCTCGGGG | + |
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Preference number: 1 (lower is better) Translates to: RGPAPSYLAAAGGGA*ADAGAAWMDRTPSG Trigger: CCCCGAGGGCGTCCTGTCCATCCAGGCCGCACCAGCGTCGGCCCAGGCCCCACCGCCAGCCGCAGCCAAGTAGGAGGGGGCTGGGCCGCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| 3UTR CCA 90 bp | GACTGTCTGGTTGCAGGGGAAGGATCGGGTCTTGGGAACCAGGCCTaGATGGTCTGGAGTGGGAGGTCTGTGCAGTCCAGGACGTTTGGG | + |
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Preference number: 1 (lower is better) Translates to: DCLVAGEGSGLGNQA*MVWSGRSVQSRTFG Trigger: CCCAAACGTCCTGGACTGCACAGACCTCCCACTCCAGACCATCCAGGCCTGGTTCCCAAGACCCGATCCTTCCCCTGCAACCAGACAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR CCA 90 bp | GGGGGCAGTTGTAGACTGTCTGGTTGCAGGGGAAGGATCGGGTCTTaGGAACCAGGCCTGGATGGTCTGGAGTGGGAGGTCTGTGCAGTC | + |
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Preference number: 1 (lower is better) Translates to: GGSCRLSGCRGRIGS*EPGLDGLEWEVCAV Trigger: GACTGCACAGACCTCCCACTCCAGACCATCCAGGCCTGGTTCCCAAGACCCGATCCTTCCCCTGCAACCAGACAGTCTACAACTGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR CCA 90 bp | GAAGGAGAAGAGGAGGAGGGTGGGAGGTGGGTTGCCGAGGATATCTaGTTGAAGACTTGGGGGTCAAGACAAAGGGACTTAGGGGGATGG | + |
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Preference number: 1 (lower is better) Translates to: EGEEEEGGRWVAEDI*LKTWGSRQRDLGGW Trigger: CCATCCCCCTAAGTCCCTTTGTCTTGACCCCCAAGTCTTCAACCAGATATCCTCGGCAACCCACCTCCCACCCTCCTCCTCTTCTCCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR CCA 90 bp | TACAGTTTGGTGTTGGGTGTTCTAGTTGGCCTGGTGTCCAAGAGTTaGGGCAGTCGAAAAAGGGTTCCAGAGTCTGGTGTGGCTGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: YSLVLGVLVGLVSKS*GSRKRVPESGVAGW Trigger: CCAGCCAGCCACACCAGACTCTGGAACCCTTTTTCGACTGCCCCAACTCTTGGACACCAGGCCAACTAGAACACCCAACACCAAACTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR-3UTR TCA 90 bp | GTTGCAGGGGAAGGATCGGGTCTTGGGAACCAGGCCTGGATGGTCTGGAGTGGGGTGGGTCGGTGGGGCTaGGACTGTCGGCTGAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: VAGEGSGLGNQAWMVWSGVGRWG*DCRLRV Trigger: AACCCTCAGCCGACAGTCTCAGCCCCACCGACCCAC...CCCACTCCAGACCATCCAGGCCTGGTTCCCAAGACCCGATCCTTCCCCTGCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR-3UTR GCA 90 bp | GGACATCTGGCTGGGCGGAGTCAGATCGGCTTTAATAGAGGGAGCCTGAGGAGGCCCCTCCTACTTGGCTaGGGCTGGCGGTGGGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: GHLAGRSQIGFNRGSLRRPLLLG*GWRWGL Trigger: CAGGCCCCACCGCCAGCCGCAGCCAAGTAGGAGGGG...CCTCCTCAGGCTCCCTCTATTAAAGCCGATCTGACTCCGCCCAGCCAGATGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| 3UTR-3UTR CCA 90 bp | GGACATCTGGCTGGGCGGAGTCAGATCGGCTTTAATAGAGGGAGCCTGAGGAGGCTGGTGCGGCCTGGATaGACAGGACGCCCTCGGGGG | + |
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Preference number: 2 (lower is better) Translates to: GHLAGRSQIGFNRGSLRRLVRPG*TGRPRG Trigger: CCCCCGAGGGCGTCCTGTCCATCCAGGCCGCACCAG...CCTCCTCAGGCTCCCTCTATTAAAGCCGATCTGACTCCGCCCAGCCAGATGTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| 3UTR-3UTR CCA 90 bp | TTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCGGCTTTAATAGAGGGCTACTTGGCTGCGGCTaGCGGTGGGGCCTGGGCCGA | + |
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Preference number: 2 (lower is better) Translates to: LAHSGHLAGRSQIGFNRGLLGCG*RWGLGR Trigger: TCGGCCCAGGCCCCACCGCCAGCCGCAGCCAAGTAG...CCCTCTATTAAAGCCGATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| 3UTR-3UTR CCA 90 bp | CGGAGTCAGATCGGCTTTAATAGAGGGAGCCTGAGGAGGCTCCCGGGGTGCGGGCTCGGGACATCTGGCTaGGCGGAGTCAGATCGGCTT | + |
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Preference number: 2 (lower is better) Translates to: RSQIGFNRGSLRRLPGCGLGTSG*AESDRL Trigger: AAGCCGATCTGACTCCGCCCAGCCAGATGTCCCGAG...CCCGCACCCCGGGAGCCTCCTCAGGCTCCCTCTATTAAAGCCGATCTGACTCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000004982.6 ENST00000587965.1 |
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| 3UTR-3UTR CCA 90 bp | TTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCGGCTTTAATAGAGGGGACGCTGGTGCGGCCTaGATGGACAGGACGCCCTCG | + |
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Preference number: 2 (lower is better) Translates to: LAHSGHLAGRSQIGFNRGDAGAA*MDRTPS Trigger: CGAGGGCGTCCTGTCCATCCAGGCCGCACCAGCGTC...CCCTCTATTAAAGCCGATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| 3UTR-3UTR CCA 90 bp | GTTGCAGGGGAAGGATCGGGTCTTGGGAACCAGGCCTGGATGGTCTGGAGTGGGCTCGGGACATCTGGCTaGGCGGAGTCAGATCGGCTT | + |
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Preference number: 2 (lower is better) Translates to: VAGEGSGLGNQAWMVWSGLGTSG*AESDRL Trigger: AAGCCGATCTGACTCCGCCCAGCCAGATGTCCCGAG...CCCACTCCAGACCATCCAGGCCTGGTTCCCAAGACCCGATCCTTCCCCTGCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR-3UTR GCA 90 bp | TCCAGAGTCTGGTGTGGCTGGCTGGGGTTTCACGGCAGAAAATGGGCTGGAGGGGGAGTGGGAGGTCTGTaGAGTCCAGGACGTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SRVWCGWLGFHGRKWAGGGVGGL*SPGRLG Trigger: CCCCAAACGTCCTGGACTGCACAGACCTCCCACTCC...CCCTCCAGCCCATTTTCTGCCGTGAAACCCCAGCCAGCCACACCAGACTCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR-3UTR CCA 90 bp | GGTGTTCTAGTTGGCCTGGTGTCCAAGAGTTGGGGCAGTCGAAAAAGGGTTCCACGCACTCGGGACATCTaGCTGGGCGGAGTCAGATCG | + |
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Preference number: 2 (lower is better) Translates to: GVLVGLVSKSWGSRKRVPRTRDI*LGGVRS Trigger: CGATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCG...TGGAACCCTTTTTCGACTGCCCCAACTCTTGGACACCAGGCCAACTAGAACACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR CAA 90 bp | GTACAGTTTGGTGTTGGGTGTTCTAGTTGGCCTGGTGTCCAAGAGTaGGGGCAGTCGAAAAAGGGTTCCAGAGTCTGGTGTGGCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: VQFGVGCSSWPGVQE*GQSKKGSRVWCGWL Trigger: CAGCCAGCCACACCAGACTCTGGAACCCTTTTTCGACTGCCCCAACTCTTGGACACCAGGCCAACTAGAACACCCAACACCAAACTGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR-3UTR CCA 90 bp | TCCAGAGTCTGGTGTGGCTGGCTGGGGTTTCACGGCAGAAAATGGGCTGGAGGGGTCTACACCATAATTTaGTGTCAAAATAGGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: SRVWCGWLGFHGRKWAGGVYTII*CQNREG Trigger: CCCTTCCCTATTTTGACACCAAATTATGGTGTAGAC...CCCTCCAGCCCATTTTCTGCCGTGAAACCCCAGCCAGCCACACCAGACTCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR CCA 72 bp | GCCCCCTCCTACTTGGCTGCGGCTGGCGGTGGGGCCTaGGCCGACGCTGGTGCGGCCTGGATGGACAGGACG | + |
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Preference number: 3 (lower is better) Translates to: APSYLAAAGGGA*ADAGAAWMDRT Trigger: CGTCCTGTCCATCCAGGCCGCACCAGCGTCGGCCCAGGCCCCACCGCCAGCCGCAGCCAAGTAGGAGGGGGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| 3UTR-3UTR CAA 90 bp | GTTGCAGGGGAAGGATCGGGTCTTGGGAACCAGGCCTGGATGGTCTGGAGTGGGGTGAGAGGACAGTCCTaGGCGCACTCGGGACATCTG | + |
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Preference number: 3 (lower is better) Translates to: VAGEGSGLGNQAWMVWSGVRGQS*AHSGHL Trigger: CAGATGTCCCGAGTGCGCCAAGGACTGTCCTCTCAC...CCCACTCCAGACCATCCAGGCCTGGTTCCCAAGACCCGATCCTTCCCCTGCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR-3UTR CAA 90 bp | TCCAGAGTCTGGTGTGGCTGGCTGGGGTTTCACGGCAGAAAATGGGCTGGAGGGCTGGAAGCCGGGGAGTaGTCGGTGTGGGGTCGGAAA | + |
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Preference number: 3 (lower is better) Translates to: SRVWCGWLGFHGRKWAGGLEAGE*SVWGRK Trigger: TTTCCGACCCCACACCGACAACTCCCCGGCTTCCAG...CCCTCCAGCCCATTTTCTGCCGTGAAACCCCAGCCAGCCACACCAGACTCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR GCA 72 bp | AAATGGGCTGGAGGGGGCAGTTGTAGACTGTCTGGTTaGAGGGGAAGGATCGGGTCTTGGGAACCAGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: KWAGGGSCRLSG*RGRIGSWEPGL Trigger: CAGGCCTGGTTCCCAAGACCCGATCCTTCCCCTGCAACCAGACAGTCTACAACTGCCCCCTCCAGCCCATTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR TCA 72 bp | GTGGGGCTATATGCCAAGAAAGTGGGTCGGTGGGGCTaGGACTGTCGGCTGAGGGTTAGGGTAGTGCTGGTA | + |
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Preference number: 3 (lower is better) Translates to: VGLYAKKVGRWG*DCRLRVRVVLV Trigger: TACCAGCACTACCCTAACCCTCAGCCGACAGTCTCAGCCCCACCGACCCACTTTCTTGGCATATAGCCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR CCA 72 bp | CCTAGGACATCCGTGCAGAGTCTGGGGAGGTTGGGGTaGGAGAGTCTGTACAGTTTGGTGTTGGGTGTTCTA | + |
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Preference number: 3 (lower is better) Translates to: PRTSVQSLGRLG*ESLYSLVLGVL Trigger: TAGAACACCCAACACCAAACTGTACAGACTCTCCCACCCCAACCTCCCCAGACTCTGCACGGATGTCCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR CCA 72 bp | GAGGAGGAGGGTGGGAGGTGGGTTGCCGAGGATATCTaGTTGAAGACTTGGGGGTCAAGACAAAGGGACTTA | + |
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Preference number: 3 (lower is better) Translates to: EEEGGRWVAEDI*LKTWGSRQRDL Trigger: TAAGTCCCTTTGTCTTGACCCCCAAGTCTTCAACCAGATATCCTCGGCAACCCACCTCCCACCCTCCTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR CCA 72 bp | GTGTTGGGTGTTCTAGTTGGCCTGGTGTCCAAGAGTTaGGGCAGTCGAAAAAGGGTTCCAGAGTCTGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: VLGVLVGLVSKS*GSRKRVPESGV Trigger: CACACCAGACTCTGGAACCCTTTTTCGACTGCCCCAACTCTTGGACACCAGGCCAACTAGAACACCCAACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR CCA 72 bp | GGAGAGTCTGTACAGTTTGGTGTTGGGTGTTCTAGTTaGCCTGGTGTCCAAGAGTTGGGGCAGTCGAAAAAG | + |
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Preference number: 3 (lower is better) Translates to: GESVQFGVGCSS*PGVQELGQSKK Trigger: CTTTTTCGACTGCCCCAACTCTTGGACACCAGGCCAACTAGAACACCCAACACCAAACTGTACAGACTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR GCA 90 bp | GTGCGGCCTGGATGGACAGGACGCCCTCGGGGGACAGCGCGGACGTCACGGCAGCCCCTCCTACTTGGCTaGGGCTGGCGGTGGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: VRPGWTGRPRGTARTSRQPLLLG*GWRWGL Trigger: CAGGCCCCACCGCCAGCCGCAGCCAAGTAGGAGGGG...CTGCCGTGACGTCCGCGCTGTCCCCCGAGGGCGTCCTGTCCATCCAGGCCGCAC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| CDS-3UTR CCA 90 bp | GACAGGACGCCCTCGGGGGACAGCGCGGACGTCACGGCAGCCGGATCCACGCCAAGGGGGCGAGCGTGGTaGGGCAGAGCGCAGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: DRTPSGDSADVTAAGSTPRGRAW*GRAQPA Trigger: AGCTGGCTGCGCTCTGCCCCACCACGCTCGCCCCCT...TGGCGTGGATCCGGCTGCCGTGACGTCCGCGCTGTCCCCCGAGGGCGTCCTGTC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| CDS-3UTR CCA 90 bp | TGGTGCGGCCTGGATGGACAGGACGCCCTCGGGGGACAGCGCGGACGTCACGGCCTGGTGCGGCCTGGATaGACAGGACGCCCTCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: WCGLDGQDALGGQRGRHGLVRPG*TGRPRG Trigger: CCCCCGAGGGCGTCCTGTCCATCCAGGCCGCACCAG...GCCGTGACGTCCGCGCTGTCCCCCGAGGGCGTCCTGTCCATCCAGGCCGCACCA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| CDS-3UTR CCA 90 bp | GGGCCTGGGCCGACGCTGGTGCGGCCTGGATGGACAGGACGCCCTCGGGGGACAAGCAGCACCGAAAAGTaGCCGGGGTCCGTCGGCACC | + |
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Preference number: 4 (lower is better) Translates to: GPGPTLVRPGWTGRPRGTSSTEK*PGSVGT Trigger: GGTGCCGACGGACCCCGGCCACTTTTCGGTGCTGCT...TGTCCCCCGAGGGCGTCCTGTCCATCCAGGCCGCACCAGCGTCGGCCCAGGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| CDS-3UTR CCA 90 bp | TGGTGCGGCCTGGATGGACAGGACGCCCTCGGGGGACAGCGCGGACGTCACGGCGACGCTGGTGCGGCCTaGATGGACAGGACGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: WCGLDGQDALGGQRGRHGDAGAA*MDRTPS Trigger: CGAGGGCGTCCTGTCCATCCAGGCCGCACCAGCGTC...GCCGTGACGTCCGCGCTGTCCCCCGAGGGCGTCCTGTCCATCCAGGCCGCACCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| CDS-3UTR GCA 90 bp | GGGCCTGGGCCGACGCTGGTGCGGCCTGGATGGACAGGACGCCCTCGGGGGACACGCAGCCAAGACGGCTaGACAGGCACAGGGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: GPGPTLVRPGWTGRPRGTRSQDG*TGTGIS Trigger: GGAGATCCCTGTGCCTGTGCAGCCGTCTTGGCTGCG...TGTCCCCCGAGGGCGTCCTGTCCATCCAGGCCGCACCAGCGTCGGCCCAGGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| CDS-3UTR GCA 90 bp | GATGGACAGGACGCCCTCGGGGGACAGCGCGGACGTCACGGCAGCCGGATCCACCGCGCGACGAATCCGTaGTCATCCTGGAGGGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: DGQDALGGQRGRHGSRIHRATNP*SSWRGG Trigger: CCCTCCCCTCCAGGATGAGCACGGATTCGTCGCGCG...GTGGATCCGGCTGCCGTGACGTCCGCGCTGTCCCCCGAGGGCGTCCTGTCCATC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| CDS-3UTR TCA 90 bp | TGGACAGGACGCCCTCGGGGGACAGCGCGGACGTCACGGCAGCCGGATCCACGCGTTCGCCCACCACCTTaGCAGCAATTTCCTCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: WTGRPRGTARTSRQPDPRVRPPP*QQFPPA Trigger: CGCCGGAGGAAATTGCTGTCAAGGTGGTGGGCGAAC...GCGTGGATCCGGCTGCCGTGACGTCCGCGCTGTCCCCCGAGGGCGTCCTGTCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| CDS-3UTR CCA 90 bp | GGGCGGAGTCAGATCGGCTTTAATAGAGGGAGCCTGAGGAGGCTCCCGGGGTGCACCGGGCGCTCCTCGTaGCGCGCGTGCACCTCCACG | + |
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Preference number: 4 (lower is better) Translates to: GRSQIGFNRGSLRRLPGCTGRSS*RACTST Trigger: CGTGGAGGTGCACGCGCGCCACGAGGAGCGCCCGGT...GCACCCCGGGAGCCTCCTCAGGCTCCCTCTATTAAAGCCGATCTGACTCCGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| CDS-3UTR CCA 90 bp | AGAGGACAGTCCTTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCGGCCTACTTGGCTGCGGCTaGCGGTGGGGCCTGGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: RGQSLAHSGHLAGRSQIGLLGCG*RWGLGR Trigger: TCGGCCCAGGCCCCACCGCCAGCCGCAGCCAAGTAG...GCCGATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAAGGACTGTCCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000004982.6 ENST00000587965.1 |
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| CDS-3UTR GCA 90 bp | GGTGAGAGGACAGTCCTTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCAGCGCCACGCTGGGTaGGCGCAGGTAGTAGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GERTVLGALGTSGWAESDQRHAG*AQVVGG Trigger: GCCCCCTACTACCTGCGCGCACCCAGCGTGGCGCTG...ATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAAGGACTGTCCTCTCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000004982.6 ENST00000587965.1 |
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| CDS-3UTR GCA 90 bp | GAGAGGACAGTCCTTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCGGTCCTCGTGGCGCGCGTaGACCTCCACGTGTTCGCCC | + |
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Preference number: 4 (lower is better) Translates to: ERTVLGALGTSGWAESDRSSWRA*TSTCSP Trigger: GGGCGAACACGTGGAGGTGCACGCGCGCCACGAGGA...CCGATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAAGGACTGTCCTCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000004982.6 ENST00000587965.1 |
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| CDS-3UTR CCA 90 bp | GTTGCAGGGGAAGGATCGGGTCTTGGGAACCAGGCCTGGATGGTCTGGAGTGGGAGGGGGCGAGCGTGGTaGGGCAGAGCGCAGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: VAGEGSGLGNQAWMVWSGRGRAW*GRAQPA Trigger: AGCTGGCTGCGCTCTGCCCCACCACGCTCGCCCCCT...CCCACTCCAGACCATCCAGGCCTGGTTCCCAAGACCCGATCCTTCCCCTGCAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | GGTGAGAGGACAGTCCTTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCGGGCAGCGCCACGCTaGGTGCGCGCAGGTAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GERTVLGALGTSGWAESDRAAPR*VRAGSR Trigger: CCTACTACCTGCGCGCACCCAGCGTGGCGCTGCCCG...ATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAAGGACTGTCCTCTCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000004982.6 ENST00000587965.1 |
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| CDS-3UTR CCA 90 bp | GGTGAGAGGACAGTCCTTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCTGGTGCGGCCTGGATaGACAGGACGCCCTCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: GERTVLGALGTSGWAESDLVRPG*TGRPRG Trigger: CCCCCGAGGGCGTCCTGTCCATCCAGGCCGCACCAG...ATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAAGGACTGTCCTCTCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000004982.6 ENST00000587965.1 |
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| CDS-3UTR CCA 90 bp | GTGAGAGGACAGTCCTTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCCTACTTGGCTGCGGCTaGCGGTGGGGCCTGGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: VRGQSLAHSGHLAGRSQILLGCG*RWGLGR Trigger: TCGGCCCAGGCCCCACCGCCAGCCGCAGCCAAGTAG...GATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAAGGACTGTCCTCTCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000004982.6 ENST00000587965.1 |
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| CDS-3UTR CCA 90 bp | GGATGGACAGGACGCCCTCGGGGGACAGCGCGGACGTCACGGCAGCCGGATCCAAATCCGTGCTCATCCTaGAGGGGAGGGAGGCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: GWTGRPRGTARTSRQPDPNPCSS*RGGRLE Trigger: CTCAAGCCTCCCTCCCCTCCAGGATGAGCACGGATT...TGGATCCGGCTGCCGTGACGTCCGCGCTGTCCCCCGAGGGCGTCCTGTCCATCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| CDS-3UTR CCA 90 bp | GGTGAGAGGACAGTCCTTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCCCTCGCCGAAGCGCTaGTCAAAGAGGCGTCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: GERTVLGALGTSGWAESDPSPKR*SKRRPG Trigger: GCCCGGACGCCTCTTTGACCAGCGCTTCGGCGAGGG...ATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAAGGACTGTCCTCTCACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000004982.6 ENST00000587965.1 |
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| CDS-3UTR CCA 90 bp | AGGGTTAGGGTAGTGCTGGTAGGGTCTGGAAGCCGGGGAGTTGTCGGTGTGGGGGACGCTGGTGCGGCCTaGATGGACAGGACGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: RVRVVLVGSGSRGVVGVGDAGAA*MDRTPS Trigger: CGAGGGCGTCCTGTCCATCCAGGCCGCACCAGCGTC...CCCCACACCGACAACTCCCCGGCTTCCAGACCCTACCAGCACTACCCTAACCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR GCA 90 bp | TGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCGGCTTTAATAGAGGGACAGCGCCACGCTGGGTaGGCGCAGGTAGTAGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: WRTRDIWLGGVRSALIEGQRHAG*AQVVGG Trigger: GCCCCCTACTACCTGCGCGCACCCAGCGTGGCGCTG...TCCCTCTATTAAAGCCGATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000004982.6 ENST00000587965.1 |
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| CDS-3UTR CCA 90 bp | TGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCGGCTTTAATAGAGGGACGGGCAGCGCCACGCTaGGTGCGCGCAGGTAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: WRTRDIWLGGVRSALIEGRAAPR*VRAGSR Trigger: CCTACTACCTGCGCGCACCCAGCGTGGCGCTGCCCG...TCCCTCTATTAAAGCCGATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000004982.6 ENST00000587965.1 |
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| CDS-3UTR CCA 90 bp | CCTGGTGTCCAAGAGTTGGGGCAGTCGAAAAAGGGTTCCAGAGTCTGGTGTGGCTCCGGGCGCTCCTCGTaGCGCGCGTGCACCTCCACG | + |
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Preference number: 4 (lower is better) Translates to: PGVQELGQSKKGSRVWCGSGRSS*RACTST Trigger: CGTGGAGGTGCACGCGCGCCACGAGGAGCGCCCGGA...GCCACACCAGACTCTGGAACCCTTTTTCGACTGCCCCAACTCTTGGACACCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR GCA 90 bp | GGCAGTTGTAGACTGTCTGGTTGCAGGGGAAGGATCGGGTCTTGGGAACCAGGCCGCGCGACGAATCCGTaGTCATCCGGGCGCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GSCRLSGCRGRIGSWEPGRATNP*SSGRSS Trigger: CGAGGAGCGCCCGGATGAGCACGGATTCGTCGCGCG...GCCTGGTTCCCAAGACCCGATCCTTCCCCTGCAACCAGACAGTCTACAACTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR GCA 90 bp | CGGAGTCAGATCGGCTTTAATAGAGGGAGCCTGAGGAGGCTCCCGGGGTGCGGGGGAGTGGGAGGTCTGTaGAGTCCAGGACGTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSQIGFNRGSLRRLPGCGGVGGL*SPGRLG Trigger: CCCCAAACGTCCTGGACTGCACAGACCTCCCACTCC...CCCGCACCCCGGGAGCCTCCTCAGGCTCCCTCTATTAAAGCCGATCTGACTCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR GCA 90 bp | GGGCGGAGTCAGATCGGCTTTAATAGAGGGAGCCTGAGGAGGCTCCCGGGGTGCGGCCTAGGACATCCGTaGAGAGTCTGGGGAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRSQIGFNRGSLRRLPGCGLGHP*RVWGGW Trigger: CCAACCTCCCCAGACTCTGCACGGATGTCCTAGGCC...GCACCCCGGGAGCCTCCTCAGGCTCCCTCTATTAAAGCCGATCTGACTCCGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | GTTCCAGAGTCTGGTGTGGCTGGCTGGGGTTTCACGGCAGAAAATGGGCTGGAGAGTAGGGGGCGAGCGTaGTGGGGCAGAGCGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPESGVAGWGFTAENGLESRGRA*WGRAQP Trigger: TGGCTGCGCTCTGCCCCACCACGCTCGCCCCCTACT...CTCCAGCCCATTTTCTGCCGTGAAACCCCAGCCAGCCACACCAGACTCTGGAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | AGTCAGATCGGCTTTAATAGAGGGAGCCTGAGGAGGCTCCCGGGGTGCGGGCGCCTCGGGACATCTGGCTaGGCGGAGTCAGATCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQIGFNRGSLRRLPGCGRLGTSG*AESDRL Trigger: AAGCCGATCTGACTCCGCCCAGCCAGATGTCCCGAG...GCGCCCGCACCCCGGGAGCCTCCTCAGGCTCCCTCTATTAAAGCCGATCTGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000004982.6 ENST00000587965.1 |
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| CDS-3UTR CCA 90 bp | GGTGAGAGGACAGTCCTTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCGCACTCGGGACATCTaGCTGGGCGGAGTCAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: GERTVLGALGTSGWAESDRTRDI*LGGVRS Trigger: CGATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCG...ATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAAGGACTGTCCTCTCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000004982.6 ENST00000587965.1 |
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| CDS-3UTR CCA 90 bp | GGGCGGAGTCAGATCGGCTTTAATAGAGGGAGCCTGAGGAGGCTCCCGGGGTGCCAGGCCTGGATGGTCTaGAGTGGGAGGTCTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRSQIGFNRGSLRRLPGCQAWMV*SGRSVQ Trigger: CTGCACAGACCTCCCACTCCAGACCATCCAGGCCTG...GCACCCCGGGAGCCTCCTCAGGCTCCCTCTATTAAAGCCGATCTGACTCCGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR TCA 90 bp | AGGGTTAGGGTAGTGCTGGTAGGGTCTGGAAGCCGGGGAGTTGTCGGTGTGGGGGTTCGCCCACCACCTTaGCAGCAATTTCCTCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RVRVVLVGSGSRGVVGVGVRPPP*QQFPPA Trigger: CGCCGGAGGAAATTGCTGTCAAGGTGGTGGGCGAAC...CCCCACACCGACAACTCCCCGGCTTCCAGACCCTACCAGCACTACCCTAACCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR GCA 90 bp | GGTCTTAAGTGGGGCTATATGCCAAGAAAGTGGGTCGGTGGGGCTGAGACTGTCCCCCTCCTACTTGGCTaGGGCTGGCGGTGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLKWGYMPRKWVGGAETVPLLLG*GWRWGL Trigger: CAGGCCCCACCGCCAGCCGCAGCCAAGTAGGAGGGG...GACAGTCTCAGCCCCACCGACCCACTTTCTTGGCATATAGCCCCACTTAAGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | CTTAAGTGGGGCTATATGCCAAGAAAGTGGGTCGGTGGGGCTGAGACTGTCGGCCCCTCGCCGAAGCGCTaGTCAAAGAGGCGTCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKWGYMPRKWVGGAETVGPSPKR*SKRRPG Trigger: GCCCGGACGCCTCTTTGACCAGCGCTTCGGCGAGGG...GCCGACAGTCTCAGCCCCACCGACCCACTTTCTTGGCATATAGCCCCACTTAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000004982.6 |
||
| CDS-3UTR CCA 90 bp | GGTGAGAGGACAGTCCTTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCTCGGGACATCTGGCTaGGCGGAGTCAGATCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GERTVLGALGTSGWAESDLGTSG*AESDRL Trigger: AAGCCGATCTGACTCCGCCCAGCCAGATGTCCCGAG...ATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAAGGACTGTCCTCTCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000004982.6 ENST00000587965.1 |
||
| CDS-3UTR TCA 90 bp | TGTAGACTGTCTGGTTGCAGGGGAAGGATCGGGTCTTGGGAACCAGGCCTGGATGTGGGTCGGTGGGGCTaGGACTGTCGGCTGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CRLSGCRGRIGSWEPGLDVGRWG*DCRLRV Trigger: AACCCTCAGCCGACAGTCTCAGCCCCACCGACCCAC...ATCCAGGCCTGGTTCCCAAGACCCGATCCTTCCCCTGCAACCAGACAGTCTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000004982.6 |
||
| CDS-3UTR GCA 90 bp | GTAGTGCTGGTAGGGTCTGGAAGCCGGGGAGTTGTCGGTGTGGGGTCGGAAAGCTCCTCCGGCGAGAAGTaGTTCACGTCTAGCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: VVLVGSGSRGVVGVGSESSSGEK*FTSSST Trigger: GGTGCTGCTAGACGTGAAGCACTTCTCGCCGGAGGA...GCTTTCCGACCCCACACCGACAACTCCCCGGCTTCCAGACCCTACCAGCACTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000004982.6 |
||
| CDS-3UTR CCA 90 bp | TGTAGACTGTCTGGTTGCAGGGGAAGGATCGGGTCTTGGGAACCAGGCCTGGATAGCAGCACCGAAAAGTaGCCGGGGTCCGTCGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: CRLSGCRGRIGSWEPGLDSSTEK*PGSVGT Trigger: GGTGCCGACGGACCCCGGCCACTTTTCGGTGCTGCT...ATCCAGGCCTGGTTCCCAAGACCCGATCCTTCCCCTGCAACCAGACAGTCTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | CAGTCCTTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCGGCTTTAATGGGGAGTTGTCGGTGTaGGGTCGGAAAGCTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSLAHSGHLAGRSQIGFNGELSV*GRKAGG Trigger: CCCTCCAGCTTTCCGACCCCACACCGACAACTCCCC...ATTAAAGCCGATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAAGGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | GTGAGAGGACAGTCCTTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCAGAGTCTGGTGTGGCTaGCTGGGGTTTCACGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VRGQSLAHSGHLAGRSQIRVWCG*LGFHGR Trigger: TCTGCCGTGAAACCCCAGCCAGCCACACCAGACTCT...GATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAAGGACTGTCCTCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | GGTGAGAGGACAGTCCTTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATTTCCAGAGTCTGGTGTaGCTGGCTGGGGTTTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GERTVLGALGTSGWAESDFQSLV*LAGVSR Trigger: CCGTGAAACCCCAGCCAGCCACACCAGACTCTGGAA...ATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAAGGACTGTCCTCTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | AGTCAGATCGGCTTTAATAGAGGGAGCCTGAGGAGGCTCCCGGGGTGCGGGCGCAGGGACTTAGGGGGATaGGGTCTGGTTAGAGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQIGFNRGSLRRLPGCGRRDLGG*GLVRVG Trigger: CCCAACTCTAACCAGACCCCATCCCCCTAAGTCCCT...GCGCCCGCACCCCGGGAGCCTCCTCAGGCTCCCTCTATTAAAGCCGATCTGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR GCA 90 bp | TGTAGACTGTCTGGTTGCAGGGGAAGGATCGGGTCTTGGGAACCAGGCCTGGATCGCAGCCAAGACGGCTaGACAGGCACAGGGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CRLSGCRGRIGSWEPGLDRSQDG*TGTGIS Trigger: GGAGATCCCTGTGCCTGTGCAGCCGTCTTGGCTGCG...ATCCAGGCCTGGTTCCCAAGACCCGATCCTTCCCCTGCAACCAGACAGTCTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR GCA 90 bp | GGTGTTCTAGTTGGCCTGGTGTCCAAGAGTTGGGGCAGTCGAAAAAGGGTTCCATCCTCGTGGCGCGCGTaGACCTCCACGTGTTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GVLVGLVSKSWGSRKRVPSSWRA*TSTCSP Trigger: GGGCGAACACGTGGAGGTGCACGCGCGCCACGAGGA...TGGAACCCTTTTTCGACTGCCCCAACTCTTGGACACCAGGCCAACTAGAACACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000004982.6 |
||
| CDS-3UTR GCA 90 bp | AGTCAGATCGGCTTTAATAGAGGGAGCCTGAGGAGGCTCCCGGGGTGCGGGCGCTGTAGACTGTCTGGTTaGAGGGGAAGGATCGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQIGFNRGSLRRLPGCGRCRLSG*RGRIGS Trigger: AGACCCGATCCTTCCCCTGCAACCAGACAGTCTACA...GCGCCCGCACCCCGGGAGCCTCCTCAGGCTCCCTCTATTAAAGCCGATCTGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | TGTAGACTGTCTGGTTGCAGGGGAAGGATCGGGTCTTGGGAACCAGGCCTGGATCGCACTCGGGACATCTaGCTGGGCGGAGTCAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: CRLSGCRGRIGSWEPGLDRTRDI*LGGVRS Trigger: CGATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCG...ATCCAGGCCTGGTTCCCAAGACCCGATCCTTCCCCTGCAACCAGACAGTCTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | GTTCCAGAGTCTGGTGTGGCTGGCTGGGGTTTCACGGCAGAAAATGGGCTGGAGAGTGCTGGTAGGGTCTaGAAGCCGGGGAGTTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VPESGVAGWGFTAENGLESAGRV*KPGSCR Trigger: CCGACAACTCCCCGGCTTCCAGACCCTACCAGCACT...CTCCAGCCCATTTTCTGCCGTGAAACCCCAGCCAGCCACACCAGACTCTGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | TCCAGAGTCTGGTGTGGCTGGCTGGGGTTTCACGGCAGAAAATGGGCTGGAGGGCTGGATGGTCTGGAGTaGGAGGTCTGTGCAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRVWCGWLGFHGRKWAGGLDGLE*EVCAVQ Trigger: CTGGACTGCACAGACCTCCCACTCCAGACCATCCAG...CCCTCCAGCCCATTTTCTGCCGTGAAACCCCAGCCAGCCACACCAGACTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | GTAGTGCTGGTAGGGTCTGGAAGCCGGGGAGTTGTCGGTGTGGGGTCGGAAAGCAGAGTCTGGGGAGGTTaGGGTGGGAGAGTCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VVLVGSGSRGVVGVGSESRVWGG*GGRVCT Trigger: TGTACAGACTCTCCCACCCCAACCTCCCCAGACTCT...GCTTTCCGACCCCACACCGACAACTCCCCGGCTTCCAGACCCTACCAGCACTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | GTTCCAGAGTCTGGTGTGGCTGGCTGGGGTTTCACGGCAGAAAATGGGCTGGAGGAGGAGGGTGGGAGGTaGGTTGCCGAGGATATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPESGVAGWGFTAENGLEEEGGR*VAEDIW Trigger: CCAGATATCCTCGGCAACCCACCTCCCACCCTCCTC...CTCCAGCCCATTTTCTGCCGTGAAACCCCAGCCAGCCACACCAGACTCTGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | GTTCCAGAGTCTGGTGTGGCTGGCTGGGGTTTCACGGCAGAAAATGGGCTGGAGGGAAGGATCGGGTCTTaGGAACCAGGCCTGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: VPESGVAGWGFTAENGLEGRIGS*EPGLDG Trigger: ACCATCCAGGCCTGGTTCCCAAGACCCGATCCTTCC...CTCCAGCCCATTTTCTGCCGTGAAACCCCAGCCAGCCACACCAGACTCTGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | CAGAGTCTGGTGTGGCTGGCTGGGGTTTCACGGCAGAAAATGGGCTGGAGGGGGGTTGGGTGTTCTAGTTaGCCTGGTGTCCAAGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSLVWLAGVSRQKMGWRGVGCSS*PGVQEL Trigger: CAACTCTTGGACACCAGGCCAACTAGAACACCCAAC...CCCCCTCCAGCCCATTTTCTGCCGTGAAACCCCAGCCAGCCACACCAGACTCTG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR TCA 90 bp | CAGTCCTTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCGGCTTTAATCCGAGGATATCTGGTTaGAGACTTGGGGGTCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QSLAHSGHLAGRSQIGFNPRISG*RLGGQD Trigger: GTCTTGACCCCCAAGTCTTCAACCAGATATCCTCGG...ATTAAAGCCGATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAAGGACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR GCA 90 bp | CCTGGTGTCCAAGAGTTGGGGCAGTCGAAAAAGGGTTCCAGAGTCTGGTGTGGCGGGTGGGAGGTGGGTTaGCGAGGATATCTGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGVQELGQSKKGSRVWCGGWEVG*RGYLVE Trigger: TTCAACCAGATATCCTCGGCAACCCACCTCCCACCC...GCCACACCAGACTCTGGAACCCTTTTTCGACTGCCCCAACTCTTGGACACCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | TGTAGACTGTCTGGTTGCAGGGGAAGGATCGGGTCTTGGGAACCAGGCCTGGATAAGGGTTCCAGAGTCTaGTGTGGCTGGCTGGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CRLSGCRGRIGSWEPGLDKGSRV*CGWLGF Trigger: AAACCCCAGCCAGCCACACCAGACTCTGGAACCCTT...ATCCAGGCCTGGTTCCCAAGACCCGATCCTTCCCCTGCAACCAGACAGTCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR CAA 72 bp | TGGGAGGTGGGTTGCCGAGGATATCTGGTTGAAGACTaGGGGGTCAAGACAAAGGGACTTAGGGGGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WEVGCRGYLVED*GVKTKGLRGMG Trigger: CCCCATCCCCCTAAGTCCCTTTGTCTTGACCCCCAAGTCTTCAACCAGATATCCTCGGCAACCCACCTCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | CCTGGTGTCCAAGAGTTGGGGCAGTCGAAAAAGGGTTCCAGAGTCTGGTGTGGCTTTCACGGCAGAAAATaGGCTGGAGGGGGCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGVQELGQSKKGSRVWCGFHGRK*AGGGSC Trigger: ACAACTGCCCCCTCCAGCCCATTTTCTGCCGTGAAA...GCCACACCAGACTCTGGAACCCTTTTTCGACTGCCCCAACTCTTGGACACCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | GGACATCTGGCTGGGCGGAGTCAGATCGGCTTTAATAGAGGGAGCCTGAGGAGGCTGGTGTCCAAGAGTTaGGGCAGTCGAAAAAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GHLAGRSQIGFNRGSLRRLVSKS*GSRKRV Trigger: AACCCTTTTTCGACTGCCCCAACTCTTGGACACCAG...CCTCCTCAGGCTCCCTCTATTAAAGCCGATCTGACTCCGCCCAGCCAGATGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | CCTGGTGTCCAAGAGTTGGGGCAGTCGAAAAAGGGTTCCAGAGTCTGGTGTGGCTATATGCCAAGAAAGTaGGTCGGTGGGGCTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: PGVQELGQSKKGSRVWCGYMPRK*VGGAET Trigger: AGTCTCAGCCCCACCGACCCACTTTCTTGGCATATA...GCCACACCAGACTCTGGAACCCTTTTTCGACTGCCCCAACTCTTGGACACCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| 3UTR CAA 72 bp | GGTGTTGGGTGTTCTAGTTGGCCTGGTGTCCAAGAGTaGGGGCAGTCGAAAAAGGGTTCCAGAGTCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVGCSSWPGVQE*GQSKKGSRVWC Trigger: ACACCAGACTCTGGAACCCTTTTTCGACTGCCCCAACTCTTGGACACCAGGCCAACTAGAACACCCAACACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR GCA 90 bp | CCTGGTGTCCAAGAGTTGGGGCAGTCGAAAAAGGGTTCCAGAGTCTGGTGTGGCTTAAGTGGGGCTATATaGCAAGAAAGTGGGTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGVQELGQSKKGSRVWCGLSGAI*QESGSV Trigger: CACCGACCCACTTTCTTGGCATATAGCCCCACTTAA...GCCACACCAGACTCTGGAACCCTTTTTCGACTGCCCCAACTCTTGGACACCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | CTTAAGTGGGGCTATATGCCAAGAAAGTGGGTCGGTGGGGCTGAGACTGTCGGCGAGCGAGGGTGTCAGTaGAAGGGTCTATGTTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKWGYMPRKWVGGAETVGERGCQ*KGLCYQ Trigger: TTGATAACATAGACCCTTCCACTGACACCCTCGCTC...GCCGACAGTCTCAGCCCCACCGACCCACTTTCTTGGCATATAGCCCCACTTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | CCTGGTGTCCAAGAGTTGGGGCAGTCGAAAAAGGGTTCCAGAGTCTGGTGTGGCAGGAGGGGTCTTAAGTaGGGCTATATGCCAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGVQELGQSKKGSRVWCGRRGLK*GYMPRK Trigger: CTTTCTTGGCATATAGCCCCACTTAAGACCCCTCCT...GCCACACCAGACTCTGGAACCCTTTTTCGACTGCCCCAACTCTTGGACACCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CCA 90 bp | GGTCTTAAGTGGGGCTATATGCCAAGAAAGTGGGTCGGTGGGGCTGAGACTGTCGTTGCCGAGGATATCTaGTTGAAGACTTGGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLKWGYMPRKWVGGAETVVAEDI*LKTWGS Trigger: TGACCCCCAAGTCTTCAACCAGATATCCTCGGCAAC...GACAGTCTCAGCCCCACCGACCCACTTTCTTGGCATATAGCCCCACTTAAGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000004982.6 |
||
| CDS-3UTR CCA 90 bp | GGCAGTTGTAGACTGTCTGGTTGCAGGGGAAGGATCGGGTCTTGGGAACCAGGCAAAATAGGGAAGGGATaGAAATGTAGTACCCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GSCRLSGCRGRIGSWEPGKIGKG*KCSTRM Trigger: CATCCGGGTACTACATTTCCATCCCTTCCCTATTTT...GCCTGGTTCCCAAGACCCGATCCTTCCCCTGCAACCAGACAGTCTACAACTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000004982.6 |
||
| CDS-3UTR CCA 90 bp | GGTCTTAAGTGGGGCTATATGCCAAGAAAGTGGGTCGGTGGGGCTGAGACTGTCATCTGGTTGAAGACTTaGGGGTCAAGACAAAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GLKWGYMPRKWVGGAETVIWLKT*GSRQRD Trigger: GTCCCTTTGTCTTGACCCCCAAGTCTTCAACCAGAT...GACAGTCTCAGCCCCACCGACCCACTTTCTTGGCATATAGCCCCACTTAAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000004982.6 |
||
| CDS-3UTR CCA 90 bp | TTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCGGCTTTAATAGAGGGGTCTACACCATAATTTaGTGTCAAAATAGGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAHSGHLAGRSQIGFNRGVYTII*CQNREG Trigger: CCCTTCCCTATTTTGACACCAAATTATGGTGTAGAC...CCCTCTATTAAAGCCGATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000004982.6 |
||
| CDS-3UTR CCA 90 bp | GTCTTTGTAGAGGACTCAGAAGGAAGTAGAGGAGGGGTCTTAAGTGGGGCTATATCTGGTGTGGCTGGCTaGGGTTTCACGGCAGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VFVEDSEGSRGGVLSGAISGVAG*GFTAEN Trigger: ATTTTCTGCCGTGAAACCCCAGCCAGCCACACCAGA...TATAGCCCCACTTAAGACCCCTCCTCTACTTCCTTCTGAGTCCTCTACAAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000004982.6 |
||
| CDS CCA 90 bp | CAGAGCGCAGCCAGCTCGGCCTCCAGCAGCCCCTCGCCGAAGCGCTaGTCAAAGAGGCGTCCGGGCGCCGAAAGTCCGGGCAACGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QSAASSASSSPSPKR*SKRRPGAESPGNGA Trigger: GGCCCCGTTGCCCGGACTTTCGGCGCCCGGACGCCTCTTTGACCAGCGCTTCGGCGAGGGGCTGCTGGAGGCCGAGCTGGCTGCGCTCTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000004982.6 ENST00000587965.1 ENST00000592984.6 |
||
| CDS GCA 90 bp | CCCCGCCCCACGCCGCGGCTCACCGGGCGCTCCTCGTGGCGCGCGTaGACCTCCACGTGTTCGCCCACCACCTTGACAGCAATTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRPTPRLTGRSSWRA*TSTCSPTTLTAISS Trigger: GGAGGAAATTGCTGTCAAGGTGGTGGGCGAACACGTGGAGGTGCACGCGCGCCACGAGGAGCGCCCGGTGAGCCGCGGCGTGGGGCGGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| CDS-3UTR CAA 90 bp | TGGATGGACAGGACGCCCTCGGGGGACAGCGCGGACGTCACGGCAGCCGGATCCGTGAGAGGACAGTCCTaGGCGCACTCGGGACATCTG | + |
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Preference number: 5 (lower is better) Translates to: WMDRTPSGDSADVTAAGSVRGQS*AHSGHL Trigger: CAGATGTCCCGAGTGCGCCAAGGACTGTCCTCTCAC...GGATCCGGCTGCCGTGACGTCCGCGCTGTCCCCCGAGGGCGTCCTGTCCATCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| CDS-3UTR CAA 90 bp | GTAGTGCTGGTAGGGTCTGGAAGCCGGGGAGTTGTCGGTGTGGGGTCGGAAAGCGGGAAGGATCGGGTCTaGGGAACCAGGCCTGGATGG | + |
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Preference number: 5 (lower is better) Translates to: VVLVGSGSRGVVGVGSESGKDRV*GTRPGW Trigger: CCATCCAGGCCTGGTTCCCAAGACCCGATCCTTCCC...GCTTTCCGACCCCACACCGACAACTCCCCGGCTTCCAGACCCTACCAGCACTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CAA 90 bp | GAGGACAGTCCTTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCGGCTTGTTCGCCCACCACCTaGACAGCAATTTCCTCCGGC | + |
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Preference number: 5 (lower is better) Translates to: EDSPWRTRDIWLGGVRSACSPTT*TAISSG Trigger: GCCGGAGGAAATTGCTGTCAAGGTGGTGGGCGAACA...AGCCGATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAAGGACTGTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000004982.6 ENST00000587965.1 |
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| CDS GCA 90 bp | ACGTGTTCGCCCACCACCTTGACAGCAATTTCCTCCGGCGAGAAGTaGTTCACGTCTAGCAGCACCGAAAAGTGGCCGGGGTCCGTCGGC | + |
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Preference number: 5 (lower is better) Translates to: TCSPTTLTAISSGEK*FTSSSTEKWPGSVG Trigger: GCCGACGGACCCCGGCCACTTTTCGGTGCTGCTAGACGTGAAGCACTTCTCGCCGGAGGAAATTGCTGTCAAGGTGGTGGGCGAACACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000004982.6 ENST00000587965.1 ENST00000592984.6 |
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| CDS-3UTR CAA 90 bp | GTGAGAGGACAGTCCTTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCTGTTCGCCCACCACCTaGACAGCAATTTCCTCCGGC | + |
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Preference number: 5 (lower is better) Translates to: VRGQSLAHSGHLAGRSQICSPTT*TAISSG Trigger: GCCGGAGGAAATTGCTGTCAAGGTGGTGGGCGAACA...GATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAAGGACTGTCCTCTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000004982.6 ENST00000587965.1 |
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| CDS-3UTR CAA 90 bp | GGTGAGAGGACAGTCCTTGGCGCACTCGGGACATCTGGCTGGGCGGAGTCAGATCCTGGTGTCCAAGAGTaGGGGCAGTCGAAAAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: GERTVLGALGTSGWAESDPGVQE*GQSKKG Trigger: ACCCTTTTTCGACTGCCCCAACTCTTGGACACCAGG...ATCTGACTCCGCCCAGCCAGATGTCCCGAGTGCGCCAAGGACTGTCCTCTCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS CCA 90 bp | GCAGTGCCCCTCCTAACCGCAAGCCCAGCCTCAGATCCTTCCCATTaGTGCACGGTCTTGCCAATTACTGCTACACTCGGCAGGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: AVPLLTASPASDPSH*CTVLPITATLGRFS Trigger: GGAGAACCTGCCGAGTGTAGCAGTAATTGGCAAGACCGTGCACCAATGGGAAGGATCTGAGGCTGGGCTTGCGGTTAGGAGGGGCACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592984.6 |
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| CDS-3UTR CAA 90 bp | GGTCTTAAGTGGGGCTATATGCCAAGAAAGTGGGTCGGTGGGGCTGAGACTGTCGTGAGAGGACAGTCCTaGGCGCACTCGGGACATCTG | + |
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Preference number: 5 (lower is better) Translates to: GLKWGYMPRKWVGGAETVVRGQS*AHSGHL Trigger: CAGATGTCCCGAGTGCGCCAAGGACTGTCCTCTCAC...GACAGTCTCAGCCCCACCGACCCACTTTCTTGGCATATAGCCCCACTTAAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CAA 90 bp | AGGGTTAGGGTAGTGCTGGTAGGGTCTGGAAGCCGGGGAGTTGTCGGTGTGGGGCTGTACAGTTTGGTGTaGGGTGTTCTAGTTGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: RVRVVLVGSGSRGVVGVGLYSLV*GVLVGL Trigger: CAGGCCAACTAGAACACCCAACACCAAACTGTACAG...CCCCACACCGACAACTCCCCGGCTTCCAGACCCTACCAGCACTACCCTAACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS GCA 90 bp | CCCAGCCTCAGATCCTTCCCATTGGTGCACGGTCTTGCCAATTACTaGTACACTCGGCAGGTTCTCCAATCAAACACGCCCTGTCGGGCA | + |
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Preference number: 5 (lower is better) Translates to: PSLRSFPLVHGLANY*YTRQVLQSNTPCRA Trigger: TGCCCGACAGGGCGTGTTTGATTGGAGAACCTGCCGAGTGTAGCAGTAATTGGCAAGACCGTGCACCAATGGGAAGGATCTGAGGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592984.6 |
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| CDS GCA 90 bp | GTGCCCCTCCTAACCGCAAGCCCAGCCTCAGATCCTTCCCATTGGTaGACGGTCTTGCCAATTACTGCTACACTCGGCAGGTTCTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: VPLLTASPASDPSHW*TVLPITATLGRFSN Trigger: ATTGGAGAACCTGCCGAGTGTAGCAGTAATTGGCAAGACCGTGCACCAATGGGAAGGATCTGAGGCTGGGCTTGCGGTTAGGAGGGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592984.6 |
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| CDS-3UTR CAA 90 bp | AGGGTTAGGGTAGTGCTGGTAGGGTCTGGAAGCCGGGGAGTTGTCGGTGTGGGGTATCTGGTTGAAGACTaGGGGGTCAAGACAAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: RVRVVLVGSGSRGVVGVGYLVED*GVKTKG Trigger: TCCCTTTGTCTTGACCCCCAAGTCTTCAACCAGATA...CCCCACACCGACAACTCCCCGGCTTCCAGACCCTACCAGCACTACCCTAACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CAA 90 bp | GGTGTCAGTGGAAGGGTCTATGTTATCAAGGCAGTGTCCAGGATGGAGGTCAGGAGAGCGGGTGCTCAGTaGGGTCTTGAAGGAGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: GVSGRVYVIKAVSRMEVRRAGAQ*GLEGEE Trigger: CTCTTCTCCTTCAAGACCCAACTGAGCACCCGCTCT...CCTGACCTCCATCCTGGACACTGCCTTGATAACATAGACCCTTCCACTGACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS-3UTR CAA 90 bp | TGTAGACTGTCTGGTTGCAGGGGAAGGATCGGGTCTTGGGAACCAGGCCTGGATGAGAGTCTGTACAGTTaGGTGTTGGGTGTTCTAGTT | + |
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Preference number: 5 (lower is better) Translates to: CRLSGCRGRIGSWEPGLDESLYS*VLGVLV Trigger: AACTAGAACACCCAACACCAAACTGTACAGACTCTC...ATCCAGGCCTGGTTCCCAAGACCCGATCCTTCCCCTGCAACCAGACAGTCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000004982.6 |
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| CDS CCA 72 bp | CCCCGCCCCACGCCGCGGCTCACCGGGCGCTCCTCGTaGCGCGCGTGCACCTCCACGTGTTCGCCCACCACC | + |
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Preference number: 6 (lower is better) Translates to: PRPTPRLTGRSS*RACTSTCSPTT Trigger: GGTGGTGGGCGAACACGTGGAGGTGCACGCGCGCCACGAGGAGCGCCCGGTGAGCCGCGGCGTGGGGCGGGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| CDS GCA 72 bp | CGTCGGCACCTGGGCGACGGGCAGCGCCACGCTGGGTaGGCGCAGGTAGTAGGGGGCGAGCGTGGTGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RRHLGDGQRHAG*AQVVGGERGGA Trigger: TGCCCCACCACGCTCGCCCCCTACTACCTGCGCGCACCCAGCGTGGCGCTGCCCGTCGCCCAGGTGCCGACG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000004982.6 ENST00000587965.1 ENST00000592984.6 |
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| CDS CCA 72 bp | GGTCCGTCGGCACCTGGGCGACGGGCAGCGCCACGCTaGGTGCGCGCAGGTAGTAGGGGGCGAGCGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GPSAPGRRAAPR*VRAGSRGRAWW Trigger: CCACCACGCTCGCCCCCTACTACCTGCGCGCACCCAGCGTGGCGCTGCCCGTCGCCCAGGTGCCGACGGACC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000004982.6 ENST00000587965.1 ENST00000592984.6 |
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| CDS CCA 72 bp | CGCTGGGTGCGCGCAGGTAGTAGGGGGCGAGCGTGGTaGGGCAGAGCGCAGCCAGCTCGGCCTCCAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RWVRAGSRGRAW*GRAQPARPPAA Trigger: GGCTGCTGGAGGCCGAGCTGGCTGCGCTCTGCCCCACCACGCTCGCCCCCTACTACCTGCGCGCACCCAGCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000004982.6 ENST00000587965.1 ENST00000592984.6 |
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| CDS CCA 72 bp | CCACGCTGGGTGCGCGCAGGTAGTAGGGGGCGAGCGTaGTGGGGCAGAGCGCAGCCAGCTCGGCCTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PRWVRAGSRGRA*WGRAQPARPPA Trigger: TGCTGGAGGCCGAGCTGGCTGCGCTCTGCCCCACCACGCTCGCCCCCTACTACCTGCGCGCACCCAGCGTGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000004982.6 ENST00000587965.1 ENST00000592984.6 |
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| CDS GCA 72 bp | ACGCCGCGGCTCACCGGGCGCTCCTCGTGGCGCGCGTaGACCTCCACGTGTTCGCCCACCACCTTGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: TPRLTGRSSWRA*TSTCSPTTLTA Trigger: TGCTGTCAAGGTGGTGGGCGAACACGTGGAGGTGCACGCGCGCCACGAGGAGCGCCCGGTGAGCCGCGGCGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587965.1 |
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| CDS CCA 72 bp | GGCGAGAAGTGCTTCACGTCTAGCAGCACCGAAAAGTaGCCGGGGTCCGTCGGCACCTGGGCGACGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GEKCFTSSSTEK*PGSVGTWATGS Trigger: GCTGCCCGTCGCCCAGGTGCCGACGGACCCCGGCCACTTTTCGGTGCTGCTAGACGTGAAGCACTTCTCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000004982.6 ENST00000587965.1 ENST00000592984.6 |
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| CDS GCA 72 bp | AATCCGTGCTCATCCGGGCGCTCCTCGTGGCGCGCGTaGACCTCCACGTGTTCGCCCACCACCTTGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: NPCSSGRSSWRA*TSTCSPTTLTA Trigger: TGCTGTCAAGGTGGTGGGCGAACACGTGGAGGTGCACGCGCGCCACGAGGAGCGCCCGGATGAGCACGGATT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000004982.6 ENST00000592984.6 |
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| CDS GCA 72 bp | CCCACCACCTTGACAGCAATTTCCTCCGGCGAGAAGTaGTTCACGTCTAGCAGCACCGAAAAGTGGCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: PTTLTAISSGEK*FTSSSTEKWPG Trigger: CCCCGGCCACTTTTCGGTGCTGCTAGACGTGAAGCACTTCTCGCCGGAGGAAATTGCTGTCAAGGTGGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000004982.6 ENST00000587965.1 ENST00000592984.6 |
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| CDS CAA 90 bp | TGCAGTGCCCCTCCTAACCGCAAGCCCAGCCTCAGATCCTTCCCATaGGTGCACGGTCTTGCCAATTACTGCTACACTCGGCAGGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: CSAPPNRKPSLRSFP*VHGLANYCYTRQVL Trigger: GAGAACCTGCCGAGTGTAGCAGTAATTGGCAAGACCGTGCACCAATGGGAAGGATCTGAGGCTGGGCTTGCGGTTAGGAGGGGCACTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592984.6 |
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| CDS GCA 72 bp | CTAACCGCAAGCCCAGCCTCAGATCCTTCCCATTGGTaGACGGTCTTGCCAATTACTGCTACACTCGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LTASPASDPSHW*TVLPITATLGR Trigger: CCTGCCGAGTGTAGCAGTAATTGGCAAGACCGTGCACCAATGGGAAGGATCTGAGGCTGGGCTTGCGGTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592984.6 |
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| CDS CCA 72 bp | CTCCTAACCGCAAGCCCAGCCTCAGATCCTTCCCATTaGTGCACGGTCTTGCCAATTACTGCTACACTCGGC | + |
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Preference number: 6 (lower is better) Translates to: LLTASPASDPSH*CTVLPITATLG Trigger: GCCGAGTGTAGCAGTAATTGGCAAGACCGTGCACCAATGGGAAGGATCTGAGGCTGGGCTTGCGGTTAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592984.6 |
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| CDS CAA 72 bp | CCTCCTAACCGCAAGCCCAGCCTCAGATCCTTCCCATaGGTGCACGGTCTTGCCAATTACTGCTACACTCGG | + |
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Preference number: 6 (lower is better) Translates to: PPNRKPSLRSFP*VHGLANYCYTR Trigger: CCGAGTGTAGCAGTAATTGGCAAGACCGTGCACCAATGGGAAGGATCTGAGGCTGGGCTTGCGGTTAGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592984.6 |
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| CDS GCA 72 bp | GCCCAGCCTCAGATCCTTCCCATTGGTGCACGGTCTTaGCAATTACTGCTACACTCGGCAGGTTCTCCAATC | + |
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Preference number: 6 (lower is better) Translates to: AQPQILPIGARS*QLLLHSAGSPI Trigger: GATTGGAGAACCTGCCGAGTGTAGCAGTAATTGGCAAGACCGTGCACCAATGGGAAGGATCTGAGGCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592984.6 |
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| CDS CAA 90 bp | CTAACCGCAAGCCCAGCCTCAGATCCTTCCCATTGGTGCACGGTCTaGCCAATTACTGCTACACTCGGCAGGTTCTCCAATCAAACACGC | + |
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Preference number: 6 (lower is better) Translates to: LTASPASDPSHWCTV*PITATLGRFSNQTR Trigger: GCGTGTTTGATTGGAGAACCTGCCGAGTGTAGCAGTAATTGGCAAGACCGTGCACCAATGGGAAGGATCTGAGGCTGGGCTTGCGGTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592984.6 |
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| CDS CAA 72 bp | AGCCCAGCCTCAGATCCTTCCCATTGGTGCACGGTCTaGCCAATTACTGCTACACTCGGCAGGTTCTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: SPASDPSHWCTV*PITATLGRFSN Trigger: ATTGGAGAACCTGCCGAGTGTAGCAGTAATTGGCAAGACCGTGCACCAATGGGAAGGATCTGAGGCTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592984.6 |
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| CDS GCA 72 bp | AGATCCTTCCCATTGGTGCACGGTCTTGCCAATTACTaGTACACTCGGCAGGTTCTCCAATCAAACACGCCC | + |
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Preference number: 6 (lower is better) Translates to: RSFPLVHGLANY*YTRQVLQSNTP Trigger: GGGCGTGTTTGATTGGAGAACCTGCCGAGTGTAGCAGTAATTGGCAAGACCGTGCACCAATGGGAAGGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592984.6 |
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