Pregenerated sensors for HSPA2 (Homo sapiens)
Ensembl gene IDs: ENSG00000126803Ensembl transcript IDs: ENST00000247207.6, ENST00000247207.7, ENST00000394709.2, ENST00000554883.1
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATAGCAAGCTACCGGAGGTCAGGCCGTAGGATCAAAAACTACCAATaGTCATTTTCTGATACTTTAGAAACTAATCTCTTAAGTGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: IASYRRSGRRIKNYQ*SFSDTLETNLLSEV Trigger: GACCTCACTTAAGAGATTAGTTTCTAAAGTATCAGAAAATGACCATTGGTAGTTTTTGATCCTACGGCCTGACCTCCGGTAGCTTGCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| 3UTR GCA 90 bp | GGAACTTTTATAATTAAACTAAGTTGTTGCACCTCTCCTTTCATTTaGATATACCAAAGACTTCCAACAATAGATCTCGTACTTGGCACA | + |
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Preference number: 1 (lower is better) Translates to: GTFIIKLSCCTSPFI*IYQRLPTIDLVLGT Trigger: TGTGCCAAGTACGAGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAACTTAGTTTAATTATAAAAGTTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247207.6 ENST00000394709.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAGCAAGAGGAGCATGCCTCACAACACAACCTTTATAAACTACATTCAGTTAAGTTCCAGACCAGCCTaGCAAACATGGAGAAACCCC | + |
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Preference number: 2 (lower is better) Translates to: KSKRSMPHNTTFINYIQLSSRPA*QTWRNP Trigger: GGGGTTTCTCCATGTTTGTCAGGCTGGTCTGGAACT...TAACTGAATGTAGTTTATAAAGGTTGTGTTGTGAGGCATGCTCCTCTTGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| 3UTR-3UTR TCA 90 bp | CTAACATCTGCTAAGGAGTTCCCAGGAGTTATCAGGTTACAAGTTTCAACTGACCCTGGAATATTCAGGTaGATTTTCATTTGGACACTT | + |
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Preference number: 2 (lower is better) Translates to: LTSAKEFPGVIRLQVSTDPGIFR*IFIWTL Trigger: AAGTGTCCAAATGAAAATTCACCTGAATATTCCAGG...GTCAGTTGAAACTTGTAACCTGATAACTCCTGGGAACTCCTTAGCAGATGTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| 3UTR-3UTR GCA 90 bp | CGTTTGACAGGTGTCTATATTTGTTCCCTCAAAACAGGGACAACTATGTTAATCAGTCACTTGAAAGCTTaGCTGCTGTCTCTTGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: RLTGVYICSLKTGTTMLISHLKA*LLSLVS Trigger: TGAAACAAGAGACAGCAGGCAAGCTTTCAAGTGACT...GATTAACATAGTTGTCCCTGTTTTGAGGGAACAAATATAGACACCTGTCAAACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCAAATAGATCTCGTACTTaGCACAAGGACATTTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: TVSKLLQNRCANLRFLISNRSRT*HKDISK Trigger: CTTTGAAATGTCCTTGTGCCAAGTACGAGATCTATT...TGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247207.6 ENST00000394709.2 |
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| 3UTR-3UTR CCA 90 bp | CATCCTAACATCAAGTACTTTTTCCACTGTTATTTGACTATGGCTGATCTAACAGGCAGCACCCTCATCTaGGAATTAAACAAGATTGGT | + |
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Preference number: 2 (lower is better) Translates to: HPNIKYFFHCYLTMADLTGSTLI*ELNKIG Trigger: ACCAATCTTGTTTAATTCCCAGATGAGGGTGCTGCC...TGTTAGATCAGCCATAGTCAAATAACAGTGGAAAAAGTACTTGATGTTAGGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| 3UTR-3UTR GCA 90 bp | TTTACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCACCTCTCCTTTCATTTaGATATACCAAAGACTTCCA | + |
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Preference number: 2 (lower is better) Translates to: FTVSKLLQNRCANLRFLITSPFI*IYQRLP Trigger: TGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGT...GATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247207.6 ENST00000394709.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCAATTAAACTAAGTTGTTaGACCTCTCCTTTCATTTGC | + |
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Preference number: 2 (lower is better) Translates to: TVSKLLQNRCANLRFLISIKLSC*TSPFIC Trigger: GCAAATGAAAGGAGAGGTGCAACAACTTAGTTTAAT...TGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247207.6 ENST00000394709.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCAAACAAAAGCAAACACGCAAAATaGATTAAAGAGAAACCTCGA | + |
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Preference number: 2 (lower is better) Translates to: SKLLQNRCANLRFLISNKSKHAK*IKEKPR Trigger: TCGAGGTTTCTCTTTAATGCATTTTGCGTGTTTGCT...TTTGTTTGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000247207.6 ENST00000394709.2 |
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| 3UTR-3UTR GCA 90 bp | TATTTTACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCCGAACTAATCAAAAATaGTCAAGTCAGCAAACACGC | + |
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Preference number: 2 (lower is better) Translates to: YFTVSKLLQNRCANLRFLRTNQK*SSQQTR Trigger: GCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCG...GAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGTAAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247207.6 ENST00000394709.2 |
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| 3UTR-3UTR CCA 90 bp | CGTTTGACAGGTGTCTATATTTGTTCCCTCAAAACAGGGACAACTATGTTAATCGAATGGCTACTTTGGTaGCTTTATCTTGGTAATATG | + |
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Preference number: 2 (lower is better) Translates to: RLTGVYICSLKTGTTMLIEWLLW*LYLGNM Trigger: CATATTACCAAGATAAAGCCACCAAAGTAGCCATTC...GATTAACATAGTTGTCCCTGTTTTGAGGGAACAAATATAGACACCTGTCAAACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| 3UTR-3UTR GCA 90 bp | TATTTTACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCACCTCTCCTTTCATTTaGATATACCAAAGACTTCCA | + |
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Preference number: 2 (lower is better) Translates to: YFTVSKLLQNRCANLRFLTSPFI*IYQRLP Trigger: TGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGT...GAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGTAAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247207.6 ENST00000394709.2 |
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| 3UTR-3UTR GCA 90 bp | TTTACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCATTAAACTAAGTTGTTaGACCTCTCCTTTCATTTGC | + |
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Preference number: 2 (lower is better) Translates to: FTVSKLLQNRCANLRFLIIKLSC*TSPFIC Trigger: GCAAATGAAAGGAGAGGTGCAACAACTTAGTTTAAT...GATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGTAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000247207.6 ENST00000394709.2 |
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| 3UTR CAA 90 bp | ACAAGTTTGACTAAATTTATACTCACTATTAAGTCACTTGAAAGCTaGCCTGCTGTCTCTTGTTTCAGGCTCCTGTATGTCACAAAATTA | + |
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Preference number: 2 (lower is better) Translates to: TSLTKFILTIKSLES*PAVSCFRLLYVTKL Trigger: TAATTTTGTGACATACAGGAGCCTGAAACAAGAGACAGCAGGCAAGCTTTCAAGTGACTTAATAGTGAGTATAAATTTAGTCAAACTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| 3UTR TCA 72 bp | GGAGTTCCCAGGAGTTATCAGGTTACAAGTTTCAACTaGCCCCTGGAAAGTGAATGGCTACTTTGGTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: GVPRSYQVTSFN*PLESEWLLWWL Trigger: AAGCCACCAAAGTAGCCATTCACTTTCCAGGGGTCAGTTGAAACTTGTAACCTGATAACTCCTGGGAACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| 3UTR-3UTR CAA 90 bp | CTAACATCTGCTAAGGAGTTCCCAGGAGTTATCAGGTTACAAGTTTCAACTGACTCTTCTCCCCTTAAGTaGTTGGAATTCAAGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: LTSAKEFPGVIRLQVSTDSSPLK*LEFKAA Trigger: TGCTGCCTTGAATTCCAACAACTTAAGGGGAGAAGA...GTCAGTTGAAACTTGTAACCTGATAACTCCTGGGAACTCCTTAGCAGATGTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| 3UTR-3UTR CAA 90 bp | CTAACATCTGCTAAGGAGTTCCCAGGAGTTATCAGGTTACAAGTTTCAACTGACGATTTAAGGCAAGTATaGCAAAAACGTTATGATCCC | + |
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Preference number: 3 (lower is better) Translates to: LTSAKEFPGVIRLQVSTDDLRQV*QKRYDP Trigger: GGGATCATAACGTTTTTGCAATACTTGCCTTAAATC...GTCAGTTGAAACTTGTAACCTGATAACTCCTGGGAACTCCTTAGCAGATGTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| 3UTR GCA 72 bp | CTAAATTTATACTCACTATTAAGTCACTTGAAAGCTTaGCTGCTGTCTCTTGTTTCAGGCTCCTGTATGTCA | + |
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Preference number: 3 (lower is better) Translates to: LNLYSLLSHLKA*LLSLVSGSCMS Trigger: TGACATACAGGAGCCTGAAACAAGAGACAGCAGGCAAGCTTTCAAGTGACTTAATAGTGAGTATAAATTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| 3UTR GCA 72 bp | CATAACTATTGTCTTATGAGCAGCATGAAGCAAACCTaGATCATGTGGAAAGATATCAAAACGTCTATGTGC | + |
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Preference number: 3 (lower is better) Translates to: HNYCLMSSMKQT*IMWKDIKTSMC Trigger: GCACATAGACGTTTTGATATCTTTCCACATGATGCAGGTTTGCTTCATGCTGCTCATAAGACAATAGTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| 3UTR-3UTR CAA 90 bp | CGTTTGACAGGTGTCTATATTTGTTCCCTCAAAACAGGGACAACTATGTTAATCGGACTCCATTATATTTaGAAGTTAGAGCAAGGAATG | + |
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Preference number: 3 (lower is better) Translates to: RLTGVYICSLKTGTTMLIGLHYI*KLEQGM Trigger: CATTCCTTGCTCTAACTTCAAAATATAATGGAGTCC...GATTAACATAGTTGTCCCTGTTTTGAGGGAACAAATATAGACACCTGTCAAACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| 3UTR GCA 72 bp | ATATTTTACTGTTTCCAAGCTTCTACAGAACAGGTGTaGAAACTTAAGGTTTCTCATCTCAAACAAATCTCC | + |
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Preference number: 3 (lower is better) Translates to: IFYCFQASTEQV*KLKVSHLKQIS Trigger: GGAGATTTGTTTGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGTAAAATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247207.6 ENST00000394709.2 |
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| 3UTR TCA 72 bp | CATAGTAGTTTGTCACATATTTATGCCTGTAGTCCATaGAACACCCTTAAATGCTCATTGCTGAAAAATTTC | + |
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Preference number: 3 (lower is better) Translates to: HSSLSHIYACSP*NTLKCSLLKNF Trigger: GAAATTTTTCAGCAATGAGCATTTAAGGGTGTTTCATGGACTACAGGCATAAATATGTGACAAACTACTATG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CCA 90 bp | ACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCATCCTCACCGCCCAGGTaGGTGTCGCCGGCCGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: TVSKLLQNRCANLRFLISSSPPR*VSPAVD Trigger: GTCCACGGCCGGCGACACCCACCTGGGCGGTGAGGA...TGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CCA 90 bp | CTAACATCTGCTAAGGAGTTCCCAGGAGTTATCAGGTTACAAGTTTCAACTGACGGGTTCATGGCCACCTaGTTCTTGGCGGCGTCGCCG | + |
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Preference number: 4 (lower is better) Translates to: LTSAKEFPGVIRLQVSTDGFMAT*FLAASP Trigger: CGGCGACGCCGCCAAGAACCAGGTGGCCATGAACCC...GTCAGTTGAAACTTGTAACCTGATAACTCCTGGGAACTCCTTAGCAGATGTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR GCA 90 bp | TTTACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTGGACGAGCTCAGGGTaGGCTTGGCGCGCTCGCAAG | + |
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Preference number: 4 (lower is better) Translates to: FTVSKLLQNRCANLRFLIWTSSG*AWRARK Trigger: CTTGCGAGCGCGCCAAGCGCACCCTGAGCTCGTCCA...GATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CCA 90 bp | CAAATCTCCATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAAAACGATGCTCGCCTGCGTaGACGAGCTCAGGGTGCGCT | + |
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Preference number: 4 (lower is better) Translates to: QISMHELIKNAQVSKHAKRCSPA*TSSGCA Trigger: AGCGCACCCTGAGCTCGTCCACGCAGGCGAGCATCG...TTTTGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCATGGAGATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR TCA 90 bp | TTGTTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAATAGATCTAGGCCGGGACCGTTATaGCCGCGCTGTGCACCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LLHLSFHLHIPKTSNNRSRPGPL*PRCAPC Trigger: GCAAGGTGCACAGCGCGGTCATAACGGTCCCGGCCT...AGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR TCA 90 bp | GCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCAAACAAATCTCCCGCCCAGGTCAAAGATaGGCACGTTCTTCTCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: ASTEQVCKLKVSHLKQISRPGQR*ARSSRR Trigger: GCGGCGAGAAGAACGTGCTCATCTTTGACCTGGGCG...GGAGATTTGTTTGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR GCA 90 bp | TCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCAAACAAAGCGAGTCGATCTCGATaGTCGCCTGCGTGGACGAGC | + |
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Preference number: 4 (lower is better) Translates to: SKLLQNRCANLRFLISNKASRSR*SPAWTS Trigger: GCTCGTCCACGCAGGCGAGCATCGAGATCGACTCGC...TTTGTTTGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CCA 90 bp | TCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCAAACAAACCACTTCTTCGATGGTaGGTCCCCCGGAGGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SKLLQNRCANLRFLISNKPLLRW*VPRRLL Trigger: CAGGAGCCTCCGGGGGACCCACCATCGAAGAAGTGG...TTTGTTTGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR TCA 90 bp | AAACTAAGTTGTTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAGAAAGAGGTCGGCATTaGGCTCCTCGAAGCGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: KLSCCTSPFICIYQRLPTERGRH*APRSGR Trigger: GCGCCCGCTTCGAGGAGCTCAATGCCGACCTCTTTC...TGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAACTTAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR TCA 90 bp | CAAATCTCCATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAAAACCAGGAGGCGGAGGTTaGAGTGAGCCGAGATCAAGC | + |
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Preference number: 4 (lower is better) Translates to: QISMHELIKNAQVSKHAKPGGGG*SEPRSS Trigger: GCTTGATCTCGGCTCACTTCAACCTCCGCCTCCTGG...TTTTGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCATGGAGATTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR GCA 90 bp | ACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCACCAGGTGGCTCACCATaGGGTTGTCGAAGTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: TVSKLLQNRCANLRFLISPGGSP*GCRSPH Trigger: GTGAGGACTTCGACAACCGCATGGTGAGCCACCTGG...TGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CCA 90 bp | TTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAATAGATCTCGTAAGGTAACCTCGATTTaGGGGACCCCGCGAGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: LHLSFHLHIPKTSNNRSRKVTSI*GTPRGA Trigger: TGCGCCTCGCGGGGTCCCCCAAATCGAGGTTACCTT...ACGAGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR GCA 90 bp | AATTTATACTCACTATTAAGTCACTTGAAAGCTTGCCTGCTGTCTCTTGTTTCACGCCAGCTGTCTCGATaGCCAGCGACAACGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: NLYSLLSHLKACLLSLVSRQLSR*PATTGS Trigger: TGACCCCGTTGTCGCTGGGCATCGAGACAGCTGGCG...TGAAACAAGAGACAGCAGGCAAGCTTTCAAGTGACTTAATAGTGAGTATAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CCA 90 bp | ACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCACGAAGATGGTGTTGGTaGGGTTCATGGCCACCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TVSKLLQNRCANLRFLISRRWCW*GSWPPG Trigger: ACCAGGTGGCCATGAACCCCACCAACACCATCTTCG...TGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CCA 90 bp | TTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAATAGATCTCGTACCAGCACGATCTCCTaGATCTGGCCCTTGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LHLSFHLHIPKTSNNRSRTSTIS*IWPLSS Trigger: GCTGGACAAGGGCCAGATCCAGGAGATCGTGCTGGT...ACGAGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CCA 90 bp | TATTTTACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCAGTCCACTTCTTCGATaGTGGGTCCCCCGGAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: YFTVSKLLQNRCANLRFLSPLLR*WVPRRL Trigger: GAGCCTCCGGGGGACCCACCATCGAAGAAGTGGACT...GAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGTAAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| 3UTR CAA 72 bp | GTGGGTGAAGTTTACCCAGATTCTTCTCCCCTTAAGTaGTTGGAATTCAAGGCAGCACCCTCATCTGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: VGEVYPDSSPLK*LEFKAAPSSGN Trigger: ATTCCCAGATGAGGGTGCTGCCTTGAATTCCAACAACTTAAGGGGAGAAGAATCTGGGTAAACTTCACCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR TCA 90 bp | AAAAGCAAGAGGAGCATGCCTCACAACACAACCTTTATAAACTACATTCAGTTACACGGGCAGACATCCTaGACTTCCATATGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: KSKRSMPHNTTFINYIQLHGQTS*TSIWLG Trigger: CCCCAGCCATATGGAAGTTCAGGATGTCTGCCCGTG...TAACTGAATGTAGTTTATAAAGGTTGTGTTGTGAGGCATGCTCCTCTTGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR GCA 90 bp | CATCCTAACATCAAGTACTTTTTCCACTGTTATTTGACTATGGCTGATCTAACAATCTCGATGCTCGCCTaGGTGGACGAGCTCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: HPNIKYFFHCYLTMADLTISMLA*VDELRV Trigger: CACCCTGAGCTCGTCCACGCAGGCGAGCATCGAGAT...TGTTAGATCAGCCATAGTCAAATAACAGTGGAAAAAGTACTTGATGTTAGGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR GCA 90 bp | TTGTTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAATAGATCTTCGCCCTCGTATACCTaGACCAGTACGCTGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LLHLSFHLHIPKTSNNRSSPSYT*TSTLLW Trigger: CCAGAGCAGCGTACTGGTGCAGGTATACGAGGGCGA...AGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR GCA 90 bp | ATTAAACTAAGTTGTTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCATACCGCTCCGCCTCCTaGACCATCCGGTCAATGTCG | + |
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Preference number: 4 (lower is better) Translates to: IKLSCCTSPFICIYQRLPYRSAS*TIRSMS Trigger: CGACATTGACCGGATGGTGCAGGAGGCGGAGCGGTA...TGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAACTTAGTTTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CCA 90 bp | TTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAATAGATCTCGTCGTCGAAGATGGTGTTaGTGGGGTTCATGGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: LHLSFHLHIPKTSNNRSRRRRWC*WGSWPP Trigger: AGGTGGCCATGAACCCCACCAACACCATCTTCGACG...ACGAGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CCA 90 bp | ACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCAGTCCAATCAGCCTCTTaGCGTCGAAGATGGTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: TVSKLLQNRCANLRFLISVQSAS*RRRWCW Trigger: CCAACACCATCTTCGACGCCAAGAGGCTGATTGGAC...TGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CCA 90 bp | CTAACATCTGCTAAGGAGTTCCCAGGAGTTATCAGGTTACAAGTTTCAACTGACGGAGGATATCTCCTCTaGGAAGAAGGTCTTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTSAKEFPGVIRLQVSTDGGYLL*EEGLGL Trigger: GAGACCAAGACCTTCTTCCCAGAGGAGATATCCTCC...GTCAGTTGAAACTTGTAACCTGATAACTCCTGGGAACTCCTTAGCAGATGTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR CCA 90 bp | ATTAAACTAAGTTGTTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAAACTCCTCCGCCAGGTaGCTCACCATGCGGTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: IKLSCCTSPFICIYQRLPNSSAR*LTMRLS Trigger: CGACAACCGCATGGTGAGCCACCTGGCGGAGGAGTT...TGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAACTTAGTTTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR CCA 90 bp | CGTTTGACAGGTGTCTATATTTGTTCCCTCAAAACAGGGACAACTATGTTAATCGTTCCTCTTGATGAGTaGGGTCATGACACCGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLTGVYICSLKTGTTMLIVPLDE*GHDTAS Trigger: GCTGGCGGTGTCATGACCCCACTCATCAAGAGGAAC...GATTAACATAGTTGTCCCTGTTTTGAGGGAACAAATATAGACACCTGTCAAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR CCA 90 bp | TTTACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCGCAGGTTATTGTCCTTaGTCATGGCCCGTTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FTVSKLLQNRCANLRFLIAGYCP*SWPVRP Trigger: AGGGCGAACGGGCCATGACCAAGGACAATAACCTGC...GATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR CCA 90 bp | CATCCTAACATCAAGTACTTTTTCCACTGTTATTTGACTATGGCTGATCTAACAACTCCAGGGCGTTTTTaGCCGCGACTCGGTCGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: HPNIKYFFHCYLTMADLTTPGRF*PRLGRD Trigger: ATCGCGACCGAGTCGCGGCCAAAAACGCCCTGGAGT...TGTTAGATCAGCCATAGTCAAATAACAGTGGAAAAAGTACTTGATGTTAGGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR TCA 90 bp | CAAATCTCCATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAAAATTCGGTCGAGCCAGTTaGTCACCTCCTGACACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QISMHELIKNAQVSKHAKFGRAS*SPPDTC Trigger: ACAAGTGTCAGGAGGTGATCAACTGGCTCGACCGAA...TTTTGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCATGGAGATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR TCA 90 bp | TTTACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCCTGACCCCTGGAAAGTaGATGGCTACTTTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FTVSKLLQNRCANLRFLILTPGK*MATLVA Trigger: AGCCACCAAAGTAGCCATTCACTTTCCAGGGGTCAG...GATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR GCA 90 bp | ATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAAAATGCATTAAACCTGCACCAGTACGCTaGTCTGGTTGTCCGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: MHELIKNAQVSKHAKCIKPAPVR*SGCPSR Trigger: CCTACTCGGACAACCAGAGCAGCGTACTGGTGCAGG...TTTAATGCATTTTGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR GCA 90 bp | CGTTTGACAGGTGTCTATATTTGTTCCCTCAAAACAGGGACAACTATGTTAATCCGGTCAGGTCGAACTTaGCCAGCAGGTTATTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLTGVYICSLKTGTTMLIRSGRT*PAGYCP Trigger: AGGACAATAACCTGCTGGGCAAGTTCGACCTGACCG...GATTAACATAGTTGTCCCTGTTTTGAGGGAACAAATATAGACACCTGTCAAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCAAACAAAACTCTACTTGCACTTTaGGCTTGCCTCCCTCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKLLQNRCANLRFLISNKTLLAL*ACLPRS Trigger: TGAGCGAGGGAGGCAAGCCCAAAGTGCAAGTAGAGT...TTTGTTTGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR TCA 90 bp | CTAACATCTGCTAAGGAGTTCCCAGGAGTTATCAGGTTACAAGTTTCAACTGACGTTACAAGTTTCAACTaGCCCCTGGAAAGTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LTSAKEFPGVIRLQVSTDVTSFN*PLESEW Trigger: CCATTCACTTTCCAGGGGTCAGTTGAAACTTGTAAC...GTCAGTTGAAACTTGTAACCTGATAACTCCTGGGAACTCCTTAGCAGATGTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR TCA 90 bp | TATTTTACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCAGTTCCAGACCAGCCTaGCAAACATGGAGAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: YFTVSKLLQNRCANLRFLSSRPA*QTWRNP Trigger: GGGGTTTCTCCATGTTTGTCAGGCTGGTCTGGAACT...GAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGTAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGCAAGAGGAGCATGCCTCACAACACAACCTTTATAAACTACATTCAGTTACCCTTGTACTCTACTTaGACTTTGGGCTTGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KSKRSMPHNTTFINYIQLPLYST*TLGLPP Trigger: GGGAGGCAAGCCCAAAGTGCAAGTAGAGTACAAGGG...TAACTGAATGTAGTTTATAAAGGTTGTGTTGTGAGGCATGCTCCTCTTGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR GCA 90 bp | ATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAAAATGCATTAAACCGAGATCAAGCCATTaGACTCCAGCCTGGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: MHELIKNAQVSKHAKCIKPRSSH*TPAWAT Trigger: TGTTGCCCAGGCTGGAGTGCAATGGCTTGATCTCGG...TTTAATGCATTTTGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCAAACAAATATCCGACTGCACTGTaGCATCCTCGAATTTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKLLQNRCANLRFLISNKYPTAL*HPRISV Trigger: GACGGAAATTCGAGGATGCCACAGTGCAGTCGGATA...TTTGTTTGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR TCA 90 bp | AAACTAAGTTGTTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAGTCCTGCACATTCTCTaGTTTGTCGCCGATGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KLSCCTSPFICIYQRLPTVLHIL*FVADED Trigger: ATCCTCATCGGCGACAAATCAGAGAATGTGCAGGAC...TGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAACTTAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR TCA 90 bp | AAACTAAGTTGTTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACACAGTTGATCACCTCCTaGCACTTGTCGAGGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KLSCCTSPFICIYQRLPTQLITS*HLSRIL Trigger: CAAGATCCTCGACAAGTGTCAGGAGGTGATCAACTG...TGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAACTTAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR GCA 90 bp | CAAATCTCCATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAAAAGGTCAATGTCGTCCTTaGTCAGACGACCTTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QISMHELIKNAQVSKHAKGQCRP*SDDLCH Trigger: ATGACAAAGGTCGTCTGAGCAAGGACGACATTGACC...TTTTGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCATGGAGATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR CCA 90 bp | AAGACTTCCAACAATAGATCTCGTACTTGGCACAAGGACATTTCAAAGAAACAATCTTTCTCTGCCATCTaGTTTCGGTCGAGCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KTSNNRSRTWHKDISKKQSFSAI*FRSSQL Trigger: CAACTGGCTCGACCGAAACCAGATGGCAGAGAAAGA...TTGTTTCTTTGAAATGTCCTTGTGCCAAGTACGAGATCTATTGTTGGAAGTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR TCA 90 bp | TTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAATAGATCTCGTCAAAGAGGTTTACGCTaGCTTGAGTGCAAGCTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHLSFHLHIPKTSNNRSRQRGLR*LECKLS Trigger: ACTAAGCTTGCACTCAAGTCAGCGTAAACCTCTTTG...ACGAGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR GCA 90 bp | TTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAATAGATCTCGTATCTTGTTTTTGTCCTaGTCGCTAATCTTGCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHLSFHLHIPKTSNNRSRILFLS*SLILPL Trigger: GAGGGGCAAGATTAGCGAGCAGGACAAAAACAAGAT...ACGAGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR GCA 90 bp | CGTTTGACAGGTGTCTATATTTGTTCCCTCAAAACAGGGACAACTATGTTAATCATACTCATCTTTCTCTaGCATCTGGTTTCGGTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLTGVYICSLKTGTTMLIILIFL*HLVSVE Trigger: CTCGACCGAAACCAGATGGCAGAGAAAGATGAGTAT...GATTAACATAGTTGTCCCTGTTTTGAGGGAACAAATATAGACACCTGTCAAACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR CCA 90 bp | AAGACTTCCAACAATAGATCTCGTACTTGGCACAAGGACATTTCAAAGAAACAACTCCCCTTAAGTTGTTaGAATTCAAGGCAGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTSNNRSRTWHKDISKKQLPLSC*NSRQHP Trigger: AGGGTGCTGCCTTGAATTCCAACAACTTAAGGGGAG...TTGTTTCTTTGAAATGTCCTTGTGCCAAGTACGAGATCTATTGTTGGAAGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR CCA 90 bp | AAACAAATCTCCATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCACCCCTGGAAAGTGAATaGCTACTTTGGTGGCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KQISMHELIKNAQVSKHAPLESE*LLWWLY Trigger: ATAAAGCCACCAAAGTAGCCATTCACTTTCCAGGGG...TGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCATGGAGATTTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR TCA 90 bp | CATCCTAACATCAAGTACTTTTTCCACTGTTATTTGACTATGGCTGATCTAACACTTCCACCGTCTGCTTaGTGTTGTAGGTATAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: HPNIKYFFHCYLTMADLTLPPSA*CCRYRT Trigger: AGTCCTATACCTACAACATCAAGCAGACGGTGGAAG...TGTTAGATCAGCCATAGTCAAATAACAGTGGAAAAAGTACTTGATGTTAGGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR TCA 90 bp | TTTACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTATGCCTGTAGTCCATaGAACACCCTTAAATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FTVSKLLQNRCANLRFLIYACSP*NTLKCS Trigger: TGAGCATTTAAGGGTGTTTCATGGACTACAGGCATA...GATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR GCA 90 bp | AAACTAAGTTGTTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACATGTTTCATATCCGACTaGACTGTGGCATCCTCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KLSCCTSPFICIYQRLPTCFISD*TVASSN Trigger: ATTCGAGGATGCCACAGTGCAGTCGGATATGAAACA...TGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAACTTAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| 3UTR CAA 72 bp | CCCCATCCTAACATCAAGTACTTTTTCCACTGTTATTaGACTATGGCTGATCTAACATCTGCTAAGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PHPNIKYFFHCY*TMADLTSAKEF Trigger: GAACTCCTTAGCAGATGTTAGATCAGCCATAGTCAAATAACAGTGGAAAAAGTACTTGATGTTAGGATGGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR TCA 90 bp | AAGACTTCCAACAATAGATCTCGTACTTGGCACAAGGACATTTCAAAGAAACAAATTAATCTCTCTGAATaGCACAGATGGGTCCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: KTSNNRSRTWHKDISKKQINLSE*HRWVHY Trigger: GTAGTGGACCCATCTGTGTCATTCAGAGAGATTAAT...TTGTTTCTTTGAAATGTCCTTGTGCCAAGTACGAGATCTATTGTTGGAAGTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR GCA 90 bp | TTTACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCCTTTCGAGCTCTTTCTaGTTGTGTTCATACTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: FTVSKLLQNRCANLRFLILSSSF*LCSYSS Trigger: AGATGAGTATGAACACAAGCAGAAAGAGCTCGAAAG...GATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR GCA 90 bp | GCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCAAACAAATCTCCAGCAAACACGCAAAATaGATTAAAGAGAAACCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ASTEQVCKLKVSHLKQISSKHAK*IKEKPR Trigger: TCGAGGTTTCTCTTTAATGCATTTTGCGTGTTTGCT...GGAGATTTGTTTGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR GCA 90 bp | AAGACTTCCAACAATAGATCTCGTACTTGGCACAAGGACATTTCAAAGAAACAAAGTCACTTGAAAGCTTaGCTGCTGTCTCTTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTSNNRSRTWHKDISKKQSHLKA*LLSLVS Trigger: TGAAACAAGAGACAGCAGGCAAGCTTTCAAGTGACT...TTGTTTCTTTGAAATGTCCTTGTGCCAAGTACGAGATCTATTGTTGGAAGTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR GCA 90 bp | CAAATCTCCATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAAAAAGCATGAAGCAAACCTaGATCATGTGGAAAGATATC | + |
|
Preference number: 4 (lower is better) Translates to: QISMHELIKNAQVSKHAKSMKQT*IMWKDI Trigger: GATATCTTTCCACATGATGCAGGTTTGCTTCATGCT...TTTTGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCATGGAGATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR GCA 90 bp | AAGACTTCCAACAATAGATCTCGTACTTGGCACAAGGACATTTCAAAGAAACAAAAAGCAAGAGGAGCATaGCTCACAACACAACCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KTSNNRSRTWHKDISKKQKARGA*LTTQPL Trigger: TAAAGGTTGTGTTGTGAGGCATGCTCCTCTTGCTTT...TTGTTTCTTTGAAATGTCCTTGTGCCAAGTACGAGATCTATTGTTGGAAGTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR CCA 90 bp | AATTTATACTCACTATTAAGTCACTTGAAAGCTTGCCTGCTGTCTCTTGTTTCAGGCAGCACCCTCATCTaGGAATTAAACAAGATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NLYSLLSHLKACLLSLVSGSTLI*ELNKIG Trigger: ACCAATCTTGTTTAATTCCCAGATGAGGGTGCTGCC...TGAAACAAGAGACAGCAGGCAAGCTTTCAAGTGACTTAATAGTGAGTATAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| 3UTR CAA 72 bp | ACTAAATTTATACTCACTATTAAGTCACTTGAAAGCTaGCCTGCTGTCTCTTGTTTCAGGCTCCTGTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKFILTIKSLES*PAVSCFRLLYV Trigger: GACATACAGGAGCCTGAAACAAGAGACAGCAGGCAAGCTTTCAAGTGACTTAATAGTGAGTATAAATTTAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR GCA 90 bp | TTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAATAGATCTCGTACCTCTCCTTTCATTTaGATATACCAAAGACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHLSFHLHIPKTSNNRSRTSPFI*IYQRLP Trigger: TGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGT...ACGAGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGCAAGAGGAGCATGCCTCACAACACAACCTTTATAAACTACATTCAGTTACGAACTAATCAAAAATaGTCAAGTCAGCAAACACGC | + |
|
Preference number: 4 (lower is better) Translates to: KSKRSMPHNTTFINYIQLRTNQK*SSQQTR Trigger: GCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCG...TAACTGAATGTAGTTTATAAAGGTTGTGTTGTGAGGCATGCTCCTCTTGCTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCAGGATCACCAAAGGGTTaGAATATTCTTATCTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: TVSKLLQNRCANLRFLISGSPKG*NILIYN Trigger: GTTATAGATAAGAATATTGCAACCCTTTGGTGATCC...TGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCAAACAAAGAATGGCTACTTTGGTaGCTTTATCTTGGTAATATG | + |
|
Preference number: 4 (lower is better) Translates to: SKLLQNRCANLRFLISNKEWLLW*LYLGNM Trigger: CATATTACCAAGATAAAGCCACCAAAGTAGCCATTC...TTTGTTTGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR CCA 90 bp | ATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAAAATGCATTAAAGTTTCAACTGACCCCTaGAAAGTGAATGGCTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: MHELIKNAQVSKHAKCIKVSTDP*KVNGYF Trigger: AAAGTAGCCATTCACTTTCCAGGGGTCAGTTGAAAC...TTTAATGCATTTTGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR TCA 90 bp | TTGTTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAATAGATCTCCTGGAATATTCAGGTaGATTTTCATTTGGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: LLHLSFHLHIPKTSNNRSPGIFR*IFIWTL Trigger: AAGTGTCCAAATGAAAATTCACCTGAATATTCCAGG...AGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR TCA 90 bp | AAACTAAGTTGTTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACATCCTATTGGTTTTACTaGATTTCTCTCAAGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLSCCTSPFICIYQRLPTSYWFY*ISLKFS Trigger: GGAGAACTTGAGAGAAATTCAGTAAAACCAATAGGA...TGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAACTTAGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR GCA 90 bp | TGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAATAGATCTCGTAATTAAACTAAGTTGTTaGACCTCTCCTTTCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CTSPFICIYQRLPTIDLVIKLSC*TSPFIC Trigger: GCAAATGAAAGGAGAGGTGCAACAACTTAGTTTAAT...TACGAGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR CCA 90 bp | TATTTTACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCAATAGATCTCGTACTTaGCACAAGGACATTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YFTVSKLLQNRCANLRFLNRSRT*HKDISK Trigger: CTTTGAAATGTCCTTGTGCCAAGTACGAGATCTATT...GAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGTAAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS-3UTR CCA 90 bp | AAACTAAGTTGTTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAAGTGAATGGCTACTTTaGTGGCTTTATCTTGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: KLSCCTSPFICIYQRLPTSEWLL*WLYLGN Trigger: ATTACCAAGATAAAGCCACCAAAGTAGCCATTCACT...TGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAACTTAGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR GCA 90 bp | ATTAAACTAAGTTGTTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCATCTACAGAACAGGTGTaGAAACTTAAGGTTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IKLSCCTSPFICIYQRLPSTEQV*KLKVSH Trigger: ATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGA...TGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAACTTAGTTTAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| 3UTR CAA 72 bp | TCCTTTGGCAATTATAAGACAACTTCTGCCCAGCTTTaGTTAAAGGCTCATTTTACATTTAACCCCAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: SFGNYKTTSAQL*LKAHFTFNPRI Trigger: TATTCTGGGGTTAAATGTAAAATGAGCCTTTAACAAAAGCTGGGCAGAAGTTGTCTTATAATTGCCAAAGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CCA 90 bp | ATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAAAATGCATTAAAATCTCAAATTGGATATaGAGGAAAATGGACAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: MHELIKNAQVSKHAKCIKISNWI*RKMDKL Trigger: CAACTTGTCCATTTTCCTCCATATCCAATTTGAGAT...TTTAATGCATTTTGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS CCA 90 bp | GCCGATAGCCGGGCCACGGGCAGACATCCTGAACTTCCATATGGCTaGGGAGGCCTCACAATCACGGCAGAAGGCGAAAGGCACATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ADSRATGRHPELPYG*GGLTITAEGERHMA Trigger: CGCCATGTGCCTTTCGCCTTCTGCCGTGATTGTGAGGCCTCCCCAGCCATATGGAAGTTCAGGATGTCTGCCCGTGGCCCGGCTATCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | CAAATCTCCATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAAAACGCCTCACGGCGCGCTaGTTGGGCCCAATGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QISMHELIKNAQVSKHAKRLTAR*LGPMSF Trigger: GAAGGACATTGGGCCCAACAAGCGCGCCGTGAGGCG...TTTTGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCATGGAGATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | CAAATCTCCATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAAAAGACTCCAGGGCGTTTTaGGCCGCGACTCGGTCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: QISMHELIKNAQVSKHAKDSRAF*AATRSR Trigger: TCGCGACCGAGTCGCGGCCAAAAACGCCCTGGAGTC...TTTTGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCATGGAGATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | CGTTTGACAGGTGTCTATATTTGTTCCCTCAAAACAGGGACAACTATGTTAATCTGGCTCACCATGCGGTaGTCGAAGTCCTCACCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLTGVYICSLKTGTTMLIWLTMR*SKSSPP Trigger: GGGCGGTGAGGACTTCGACAACCGCATGGTGAGCCA...GATTAACATAGTTGTCCCTGTTTTGAGGGAACAAATATAGACACCTGTCAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | TTTACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCCGAAAGAGGTCGGCATaGAGCTCCTCGAAGCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FTVSKLLQNRCANLRFLIRKRSA*SSSKRA Trigger: CGCCCGCTTCGAGGAGCTCAATGCCGACCTCTTTCG...GATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | TTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAATAGATCTCGTGCGTCGAAGATGGTGTaGGTGGGGTTCATGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LHLSFHLHIPKTSNNRSRASKMV*VGFMAT Trigger: GGTGGCCATGAACCCCACCAACACCATCTTCGACGC...ACGAGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | CATCCTAACATCAAGTACTTTTTCCACTGTTATTTGACTATGGCTGATCTAACAGAAGGTAACCTCGATTaGGGGGACCCCGCGAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: HPNIKYFFHCYLTMADLTEGNLD*GDPARR Trigger: GCGCCTCGCGGGGTCCCCCAAATCGAGGTTACCTTC...TGTTAGATCAGCCATAGTCAAATAACAGTGGAAAAAGTACTTGATGTTAGGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | GCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCAAACAAATCTCCCGTCCAATCAGCCTCTaGGCGTCGAAGATGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASTEQVCKLKVSHLKQISRPISL*ASKMVL Trigger: CAACACCATCTTCGACGCCAAGAGGCTGATTGGACG...GGAGATTTGTTTGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | AAACAAATCTCCATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAATGATGCGCAGCACATaGAGCCCCGTGATGGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KQISMHELIKNAQVSKHAMMRST*SPVMVP Trigger: AGGCACCATCACGGGGCTCAATGTGCTGCGCATCAT...TGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCATGGAGATTTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | TTGTTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAATAGATCTGCCGAGATCAAGCCATaGCACTCCAGCCTGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLHLSFHLHIPKTSNNRSAEIKP*HSSLGN Trigger: GTTGCCCAGGCTGGAGTGCAATGGCTTGATCTCGGC...AGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | CGTTTGACAGGTGTCTATATTTGTTCCCTCAAAACAGGGACAACTATGTTAATCTACTCTACTTGCACTTaGGGCTTGCCTCCCTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RLTGVYICSLKTGTTMLIYSTCT*GLPPSL Trigger: GAGCGAGGGAGGCAAGCCCAAAGTGCAAGTAGAGTA...GATTAACATAGTTGTCCCTGTTTTGAGGGAACAAATATAGACACCTGTCAAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | ATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAAAATGCATTAAACTCACGGCGCGCTTGTaGGGCCCAATGTCCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: MHELIKNAQVSKHAKCIKLTARL*GPMSFL Trigger: CAAGAAGGACATTGGGCCCAACAAGCGCGCCGTGAG...TTTAATGCATTTTGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | ATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAAAATGCATTAAATTCTTGTGCTTGCGCTaGAACTCCTCCGCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: MHELIKNAQVSKHAKCIKFLCLR*NSSARW Trigger: CCACCTGGCGGAGGAGTTCAAGCGCAAGCACAAGAA...TTTAATGCATTTTGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | CAAATCTCCATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAAAATGCACATTCTCTGATTaGTCGCCGATGAGGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QISMHELIKNAQVSKHAKCTFSD*SPMRMA Trigger: GGCCATCCTCATCGGCGACAAATCAGAGAATGTGCA...TTTTGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCATGGAGATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | CATCCTAACATCAAGTACTTTTTCCACTGTTATTTGACTATGGCTGATCTAACATCCTTACCGGTGCTCTaGTCGGCGGCGGTAACGTTA | + |
|
Preference number: 5 (lower is better) Translates to: HPNIKYFFHCYLTMADLTSLPVL*SAAVTL Trigger: TAACGTTACCGCCGCCGACAAGAGCACCGGTAAGGA...TGTTAGATCAGCCATAGTCAAATAACAGTGGAAAAAGTACTTGATGTTAGGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | AATTTATACTCACTATTAAGTCACTTGAAAGCTTGCCTGCTGTCTCTTGTTTCACCCCTTGTACTCTACTaGCACTTTGGGCTTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NLYSLLSHLKACLLSLVSPLVLY*HFGLAS Trigger: GGAGGCAAGCCCAAAGTGCAAGTAGAGTACAAGGGG...TGAAACAAGAGACAGCAGGCAAGCTTTCAAGTGACTTAATAGTGAGTATAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | CAAATCTCCATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAAAAGTCTTGGTCTCCCCCTaGTACTCTACTTGCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QISMHELIKNAQVSKHAKVLVSP*YSTCTL Trigger: CAAAGTGCAAGTAGAGTACAAGGGGGAGACCAAGAC...TTTTGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCATGGAGATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | AAGACTTCCAACAATAGATCTCGTACTTGGCACAAGGACATTTCAAAGAAACAACGGTCAATGTCGTCCTaGCTCAGACGACCTTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KTSNNRSRTWHKDISKKQRSMSS*LRRPLS Trigger: TGACAAAGGTCGTCTGAGCAAGGACGACATTGACCG...TTGTTTCTTTGAAATGTCCTTGTGCCAAGTACGAGATCTATTGTTGGAAGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | TTGTTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAATAGATCTTCCTGCTCGCTAATCTaGCCCCTCAGTTTCTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLHLSFHLHIPKTSNNRSSCSLI*PLSFSS Trigger: AGACGAGAAACTGAGGGGCAAGATTAGCGAGCAGGA...AGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | TGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAATAGATCTCGTACTTGCCTGCTGTCTCTaGTTTCAGGCTCCTGTATGT | + |
|
Preference number: 5 (lower is better) Translates to: CTSPFICIYQRLPTIDLVLACCL*FQAPVC Trigger: ACATACAGGAGCCTGAAACAAGAGACAGCAGGCAAG...TACGAGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | TATTTTACTGTTTCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCGTGGTGTTCCTCTaGATGAGTGGGGTCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: YFTVSKLLQNRCANLRFLIVVFL*MSGVMT Trigger: TGTCATGACCCCACTCATCAAGAGGAACACCACGAT...GAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGAAACAGTAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | CGTTTGACAGGTGTCTATATTTGTTCCCTCAAAACAGGGACAACTATGTTAATCCACTTGTCGAGGATCTaGTTTTTGTCCTGCTCGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RLTGVYICSLKTGTTMLIHLSRI*FLSCSL Trigger: TAGCGAGCAGGACAAAAACAAGATCCTCGACAAGTG...GATTAACATAGTTGTCCCTGTTTTGAGGGAACAAATATAGACACCTGTCAAACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | ATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAAAATGCATTAAAGCCGCCAGGACCACCTaGGTAAAGTTTGCTGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: MHELIKNAQVSKHAKCIKAARTT*VKFADD Trigger: ATCATCAGCAAACTTTACCAAGGTGGTCCTGGCGGC...TTTAATGCATTTTGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | AAGACTTCCAACAATAGATCTCGTACTTGGCACAAGGACATTTCAAAGAAACAATCTCCCCTTAAGTTGTaGGAATTCAAGGCAGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: KTSNNRSRTWHKDISKKQSPLKL*EFKAAP Trigger: GGGTGCTGCCTTGAATTCCAACAACTTAAGGGGAGA...TTGTTTCTTTGAAATGTCCTTGTGCCAAGTACGAGATCTATTGTTGGAAGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | GCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCAAACAAATCTCCTCTTCTCCCCTTAAGTaGTTGGAATTCAAGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASTEQVCKLKVSHLKQISSSPLK*LEFKAA Trigger: TGCTGCCTTGAATTCCAACAACTTAAGGGGAGAAGA...GGAGATTTGTTTGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | CTAACATCTGCTAAGGAGTTCCCAGGAGTTATCAGGTTACAAGTTTCAACTGACTCACTATTAAGTCACTaGAAAGCTTGCCTGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LTSAKEFPGVIRLQVSTDSLLSH*KACLLS Trigger: AGACAGCAGGCAAGCTTTCAAGTGACTTAATAGTGA...GTCAGTTGAAACTTGTAACCTGATAACTCCTGGGAACTCCTTAGCAGATGTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | ATTAAACTAAGTTGTTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAGAGGTTTACGCTGACTaGAGTGCAAGCTTAGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IKLSCCTSPFICIYQRLPEVYAD*SASLVH Trigger: GTGGACTAAGCTTGCACTCAAGTCAGCGTAAACCTC...TGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAACTTAGTTTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | CAAATCTCCATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAAAAGACAGGTGTCTATATTaGTTCCCTCAAAACAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QISMHELIKNAQVSKHAKDRCLY*FPQNRD Trigger: GTCCCTGTTTTGAGGGAACAAATATAGACACCTGTC...TTTTGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCATGGAGATTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | AAACTAAGTTGTTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACATCGAGGATCTTGTTTTaGTCCTGCTCGCTAATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KLSCCTSPFICIYQRLPTSRILF*SCSLIL Trigger: CAAGATTAGCGAGCAGGACAAAAACAAGATCCTCGA...TGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAACTTAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | CAAATCTCCATGCACGAACTAATCAAAAATGCTCAAGTCAGCAAACACGCAAAATCGAGCTCTTTCTGCTaGTGTTCATACTCATCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QISMHELIKNAQVSKHAKSSSFC*CSYSSF Trigger: GAAAGATGAGTATGAACACAAGCAGAAAGAGCTCGA...TTTTGCGTGTTTGCTGACTTGAGCATTTTTGATTAGTTCGTGCATGGAGATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | TTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAATAGATCTCGTCACCTCTCCTTTCATTaGCATATACCAAAGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHLSFHLHIPKTSNNRSRHLSFH*HIPKTS Trigger: GGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTG...ACGAGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | AAACTAAGTTGTTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAAAGTCACTTGAAAGCTaGCCTGCTGTCTCTTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLSCCTSPFICIYQRLPTKSLES*PAVSCF Trigger: GAAACAAGAGACAGCAGGCAAGCTTTCAAGTGACTT...TGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAACTTAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | TGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAATAGATCTCGTAGAAGCAATTTCACTGTaGGCTATTTATCTTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CTSPFICIYQRLPTIDLVEAISL*AIYLPP Trigger: GGGAGGAAGATAAATAGCCAACAGTGAAATTGCTTC...TACGAGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | GCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCAAACAAATCTCCACCCTTAAATGCTCATaGCTGAAAAATTTCCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: ASTEQVCKLKVSHLKQISTLKCS*LKNFHQ Trigger: TTGGTGGAAATTTTTCAGCAATGAGCATTTAAGGGT...GGAGATTTGTTTGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | TGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAATAGATCTCGTAGATTTAAGGCAAGTATaGCAAAAACGTTATGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: CTSPFICIYQRLPTIDLVDLRQV*QKRYDP Trigger: GGGATCATAACGTTTTTGCAATACTTGCCTTAAATC...TACGAGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | TTGTTGCACCTCTCCTTTCATTTGCATATACCAAAGACTTCCAACAATAGATCTCTTAAGAGTCAACTCTaGTATGAAAGGGTCATTACC | + |
|
Preference number: 5 (lower is better) Translates to: LLHLSFHLHIPKTSNNRSLKSQL*YERVIT Trigger: GGTAATGACCCTTTCATACAAGAGTTGACTCTTAAG...AGATCTATTGTTGGAAGTCTTTGGTATATGCAAATGAAAGGAGAGGTGCAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | TCCAAGCTTCTACAGAACAGGTGTGCAAACTTAAGGTTTCTCATCTCAAACAAATTTGGTGGCTTTATCTaGGTAATATGCAAATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SKLLQNRCANLRFLISNKFGGFI*VICKSW Trigger: CCAAGATTTGCATATTACCAAGATAAAGCCACCAAA...TTTGTTTGAGATGAGAAACCTTAAGTTTGCACACCTGTTCTGTAGAAGCTTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS-3UTR CAA 90 bp | AAGACTTCCAACAATAGATCTCGTACTTGGCACAAGGACATTTCAAAGAAACAAGGACTCCATTATATTTaGAAGTTAGAGCAAGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: KTSNNRSRTWHKDISKKQGLHYI*KLEQGM Trigger: CATTCCTTGCTCTAACTTCAAAATATAATGGAGTCC...TTGTTTCTTTGAAATGTCCTTGTGCCAAGTACGAGATCTATTGTTGGAAGTCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
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| CDS TCA 72 bp | GATGCCGATAGCCGGGCCACGGGCAGACATCCTGACTaGAAGGCGAGCGACGTTAGGACGGGAAAACCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: DADSRATGRHPD*KASDVRTGKPG Trigger: CCCTGGTTTTCCCGTCCTAACGTCGCTCGCCTTTCAGTCAGGATGTCTGCCCGTGGCCCGGCTATCGGCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247207.7 ENST00000554883.1 |
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| CDS CCA 72 bp | CGGGCCACGGGCAGACATCCTGAACTTCCATATGGCTaGGGAGGCCTCACAATCACGGCAGAAGGCGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RATGRHPELPYG*GGLTITAEGER Trigger: CCTTTCGCCTTCTGCCGTGATTGTGAGGCCTCCCCAGCCATATGGAAGTTCAGGATGTCTGCCCGTGGCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394709.2 |
||
| CDS TCA 72 bp | AAGGCGAGCGACGTTAGGACGGGAAAACCAGGGAGATaGACTCCGCGGAGTCAACTAACGGCCACCTCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: KASDVRTGKPGR*TPRSQLTATSN Trigger: GTTCGAGGTGGCCGTTAGTTGACTCCGCGGAGTTCATCTCCCTGGTTTTCCCGTCCTAACGTCGCTCGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000247207.7 ENST00000554883.1 |
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| CDS CAA 72 bp | TTGTCGAGGATCTTGTTTTTGTCCTGCTCGCTAATCTaGCCCCTCAGTTTCTCGTCTTCCACCGTCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSRILFLSCSLI*PLSFSSSTVCL Trigger: CAAGCAGACGGTGGAAGACGAGAAACTGAGGGGCAAGATTAGCGAGCAGGACAAAAACAAGATCCTCGACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000247207.7 ENST00000394709.2 |
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