Pregenerated sensors for HSF2BP (Homo sapiens)
Ensembl gene IDs: ENSG00000160207Ensembl transcript IDs: ENST00000291560.7, ENST00000443485.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCGCTGCCGCCTCCGCTCCGTTCGCCTGAGCGTCGGCGCGCCCTCTaGCCCCTCACGCCAGAAAGCGCGGGAACGAATCCACGCCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLPPPLRSPERRRAL*PLTPESAGTNPRRG Trigger: CCCCCGGCGTGGATTCGTTCCCGCGCTTTCTGGCGTGAGGGGTCAGAGGGCGCGCCGACGCTCAGGCGAACGGAGCGGAGGCGGCAGCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS GCA 90 bp | CTACAGCCTGAATTTTGGCAACCGAAAGGCAGCGCCGGCGCCACGTaGACACGGGCTGGGCCGCTCCGCCAGCTGCCAGGGCCACTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LQPEFWQPKGSAGAT*TRAGPLRQLPGPLP Trigger: CGGCAGTGGCCCTGGCAGCTGGCGGAGCGGCCCAGCCCGTGTGCACGTGGCGCCGGCGCTGCCTTTCGGTTGCCAAAATTCAGGCTGTAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291560.7 |
||
| CDS GCA 90 bp | GACTTCCTCACTGCTGGAGACACCCCACAAGAGGGTACACGCTGCTaGTCCCATTTCTGTACAATACTCTGCCTGCTGCAGGAGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DFLTAGDTPQEGTRC*SHFCTILCLLQELL Trigger: CAGCAACTCCTGCAGCAGGCAGAGTATTGTACAGAAATGGGAGCAGCAGCGTGTACCCTCTTGTGGGGTGTCTCCAGCAGTGAGGAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS GCA 90 bp | GACGACTTCCTCACTGCTGGAGACACCCCACAAGAGGGTACACGCTaGTGCTCCCATTTCTGTACAATACTCTGCCTGCTGCAGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DDFLTAGDTPQEGTR*CSHFCTILCLLQEL Trigger: CAACTCCTGCAGCAGGCAGAGTATTGTACAGAAATGGGAGCAGCAGCGTGTACCCTCTTGTGGGGTGTCTCCAGCAGTGAGGAAGTCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS GCA 90 bp | AGGGTACACGCTGCTGCTCCCATTTCTGTACAATACTCTGCCTGCTaGAGGAGTTGCTGCTTCGCTTCATTCAACTGCTGTCGAAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RVHAAAPISVQYSAC*RSCCFASFNCCRRA Trigger: GGCTCTTCGACAGCAGTTGAATGAAGCGAAGCAGCAACTCCTGCAGCAGGCAGAGTATTGTACAGAAATGGGAGCAGCAGCGTGTACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS GCA 90 bp | CCACAAGAGGGTACACGCTGCTGCTCCCATTTCTGTACAATACTCTaGCTGCTGCAGGAGTTGCTGCTTCGCTTCATTCAACTGCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PQEGTRCCSHFCTIL*LLQELLLRFIQLLS Trigger: CGACAGCAGTTGAATGAAGCGAAGCAGCAACTCCTGCAGCAGGCAGAGTATTGTACAGAAATGGGAGCAGCAGCGTGTACCCTCTTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS GCA 90 bp | GCTGCTGCTCCCATTTCTGTACAATACTCTGCCTGCTGCAGGAGTTaGTGCTTCGCTTCATTCAACTGCTGTCGAAGAGCCAGTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AAAPISVQYSACCRS*CFASFNCCRRASFS Trigger: GGAGAAACTGGCTCTTCGACAGCAGTTGAATGAAGCGAAGCAGCAACTCCTGCAGCAGGCAGAGTATTGTACAGAAATGGGAGCAGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS GCA 90 bp | GCTGCTCCCATTTCTGTACAATACTCTGCCTGCTGCAGGAGTTGCTaGTTCGCTTCATTCAACTGCTGTCGAAGAGCCAGTTTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AAPISVQYSACCRSC*FASFNCCRRASFSF Trigger: GAAGGAGAAACTGGCTCTTCGACAGCAGTTGAATGAAGCGAAGCAGCAACTCCTGCAGCAGGCAGAGTATTGTACAGAAATGGGAGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS GCA 90 bp | AAGAGGGTACACGCTGCTGCTCCCATTTCTGTACAATACTCTGCCTaGTGCAGGAGTTGCTGCTTCGCTTCATTCAACTGCTGTCGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KRVHAAAPISVQYSA*CRSCCFASFNCCRR Trigger: TCTTCGACAGCAGTTGAATGAAGCGAAGCAGCAACTCCTGCAGCAGGCAGAGTATTGTACAGAAATGGGAGCAGCAGCGTGTACCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS GCA 90 bp | TGTCGAAGAGCCAGTTTCTCCTTCTTCTCTCTTATGTTGTCGGCCTaGACGGTTTCCAGGCGGGCTTTAAAGTGCTCACAATCCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CRRASFSFFSLMLSA*TVSRRALKCSQSIF Trigger: GAAAATGGATTGTGAGCACTTTAAAGCCCGCCTGGAAACCGTGCAGGCCGACAACATAAGAGAGAAGAAGGAGAAACTGGCTCTTCGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS GCA 90 bp | CAATACTCTGCCTGCTGCAGGAGTTGCTGCTTCGCTTCATTCAACTaGTGTCGAAGAGCCAGTTTCTCCTTCTTCTCTCTTATGTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: QYSACCRSCCFASFN*CRRASFSFFSLMLS Trigger: CGACAACATAAGAGAGAAGAAGGAGAAACTGGCTCTTCGACAGCAGTTGAATGAAGCGAAGCAGCAACTCCTGCAGCAGGCAGAGTATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS TCA 90 bp | ATAGCAGCAACATTCGTGACAATTCCAGCCAGAGCGAAAACAAACTaGCTTTCATCCGAATCCAGCTCCTGGACATCACCGTCTAACGAC | + |
|
Preference number: 5 (lower is better) Translates to: IAATFVTIPARAKTN*LSSESSSWTSPSND Trigger: GTCGTTAGACGGTGATGTCCAGGAGCTGGATTCGGATGAAAGTCAGTTTGTTTTCGCTCTGGCTGGAATTGTCACGAATGTTGCTGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS GCA 90 bp | TCCAGCACCTCCCCATTTAGTATTCTGGGTAAGAAGTCCCGTATTTaGATCACTTCAGTTGTCAGCCGTTCCAGATCCTTCTTTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: SSTSPFSILGKKSRI*ITSVVSRSRSFFLT Trigger: AGTCAGAAAGAAGGATCTGGAACGGCTGACAACTGAAGTGATGCAAATACGGGACTTCTTACCCAGAATACTAAATGGGGAGGTGCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS GCA 90 bp | TCTCTTATGTTGTCGGCCTGCACGGTTTCCAGGCGGGCTTTAAAGTaGTCACAATCCATTTTCAGCTGCTCTAATTCTTGCTCTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLMLSACTVSRRALK*SQSIFSCSNSCSFL Trigger: AAGGAAAGAGCAAGAATTAGAGCAGCTGAAAATGGATTGTGAGCACTTTAAAGCCCGCCTGGAAACCGTGCAGGCCGACAACATAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS GCA 90 bp | ACTTTGAGTTTGGTACACTGTCCTGGCTTCAAGTCTCCCAGAAGCTaGAATATGGTGTCCAAGAGCACCCGGCTTGAATTAACCAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: TLSLVHCPGFKSPRS*NMVSKSTRLELTKN Trigger: ATTCTTGGTTAATTCAAGCCGGGTGCTCTTGGACACCATATTGCAGCTTCTGGGAGACTTGAAGCCAGGACAGTGTACCAAACTCAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291560.7 |
||
| CDS CCA 90 bp | TCTTTAATTTCTGGAAGCTCTCCAGCACCTCCCCATTTAGTATTCTaGGTAAGAAGTCCCGTATTTGCATCACTTCAGTTGTCAGCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLISGSSPAPPHLVF*VRSPVFASLQLSAV Trigger: AACGGCTGACAACTGAAGTGATGCAAATACGGGACTTCTTACCCAGAATACTAAATGGGGAGGTGCTGGAGAGCTTCCAGAAATTAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS CCA 90 bp | TGCATCTGGATCACTCAAAAGCCACCACAGCAAAGGGATGAATCCTaGACTCTCGCTGATGTATTTCAAGCCTTTCAAATTGATGCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: CIWITQKPPQQRDES*TLADVFQAFQIDAY Trigger: GTAAGCATCAATTTGAAAGGCTTGAAATACATCAGCGAGAGTCCAGGATTCATCCCTTTGCTGTGGTGGCTTTTGAGTGATCCAGATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291560.7 |
||
| CDS TCA 90 bp | TCCTGGACATCACCGTCTAACGACTTCACAAAACTCTCCATTGTTTaGCCAGTGATGCTGAAAAACTTCAAAGCTTTATCTCCTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SWTSPSNDFTKLSIV*PVMLKNFKALSPPK Trigger: TTTGGGAGGAGATAAAGCTTTGAAGTTTTTCAGCATCACTGGTCAAACAATGGAGAGTTTTGTGAAGTCGTTAGACGGTGATGTCCAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000291560.7 |
||
| CDS TCA 90 bp | TCCTGGACATCACCGTCTAACGACTTCACAAAACTCTCCATTGTTTaGCCAGTGATGCTGAAAAACTTCAAAGCTTTATCCATACTTACT | + |
|
Preference number: 5 (lower is better) Translates to: SWTSPSNDFTKLSIV*PVMLKNFKALSILT Trigger: AGTAAGTATGGATAAAGCTTTGAAGTTTTTCAGCATCACTGGTCAAACAATGGAGAGTTTTGTGAAGTCGTTAGACGGTGATGTCCAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443485.1 |
||
| CDS CCA 72 bp | ACCGAAAGGCAGCGCCGGCGCCACGTGCACACGGGCTaGGCCGCTCCGCCAGCTGCCAGGGCCACTGCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: TERQRRRHVHTG*AAPPAARATAA Trigger: CGCGGCAGTGGCCCTGGCAGCTGGCGGAGCGGCCCAGCCCGTGTGCACGTGGCGCCGGCGCTGCCTTTCGGT 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291560.7 |
||
| CDS GCA 72 bp | GAATTTTGGCAACCGAAAGGCAGCGCCGGCGCCACGTaGACACGGGCTGGGCCGCTCCGCCAGCTGCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: EFWQPKGSAGAT*TRAGPLRQLPG Trigger: CCCTGGCAGCTGGCGGAGCGGCCCAGCCCGTGTGCACGTGGCGCCGGCGCTGCCTTTCGGTTGCCAAAATTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291560.7 |
||
| CDS TCA 72 bp | CCTCCGCTCCGTTCGCCTGAGCGTCGGCGCGCCCTCTaGCCCCTCACGCCAGAAAGCGCGGGAACGAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: PPLRSPERRRAL*PLTPESAGTNP Trigger: TGGATTCGTTCCCGCGCTTTCTGGCGTGAGGGGTCAGAGGGCGCGCCGACGCTCAGGCGAACGGAGCGGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS CAA 90 bp | CGGGGGTCGGGAACGGAGAGCCGCCAGGCCCAAACCTCCCAGAATTaGCGCAGTATTCTCGGCCTAGAGAGCGAGGAGTGGCCTTGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RGSGTESRQAQTSQN*RSILGLESEEWPWR Trigger: TCGCCAAGGCCACTCCTCGCTCTCTAGGCCGAGAATACTGCGCAAATTCTGGGAGGTTTGGGCCTGGCGGCTCTCCGTTCCCGACCCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS CAA 90 bp | CCAGAATTTGCGCAGTATTCTCGGCCTAGAGAGCGAGGAGTGGCCTaGGCGAGGTCCCTCTTTGGCTCTTCTGGCTTAGCCGGGGTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: PEFAQYSRPRERGVA*ARSLFGSSGLAGVL Trigger: TAAAACCCCGGCTAAGCCAGAAGAGCCAAAGAGGGACCTCGCCAAGGCCACTCCTCGCTCTCTAGGCCGAGAATACTGCGCAAATTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS GCA 72 bp | ACTGCTGGAGACACCCCACAAGAGGGTACACGCTGCTaGTCCCATTTCTGTACAATACTCTGCCTGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TAGDTPQEGTRC*SHFCTILCLLQ Trigger: CTGCAGCAGGCAGAGTATTGTACAGAAATGGGAGCAGCAGCGTGTACCCTCTTGTGGGGTGTCTCCAGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS GCA 72 bp | CTCACTGCTGGAGACACCCCACAAGAGGGTACACGCTaGTGCTCCCATTTCTGTACAATACTCTGCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LTAGDTPQEGTR*CSHFCTILCLL Trigger: CAGCAGGCAGAGTATTGTACAGAAATGGGAGCAGCAGCGTGTACCCTCTTGTGGGGTGTCTCCAGCAGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS CCA 72 bp | TTAAACTTGTTATCTCGCCGTCTACAGCCTGAATTTTaGCAACCGAAAGGCAGCGCCGGCGCCACGTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: LNLLSRRLQPEF*QPKGSAGATCT Trigger: TGTGCACGTGGCGCCGGCGCTGCCTTTCGGTTGCCAAAATTCAGGCTGTAGACGGCGAGATAACAAGTTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS GCA 72 bp | GCCAGTTTCTCCTTCTTCTCTCTTATGTTGTCGGCCTaGACGGTTTCCAGGCGGGCTTTAAAGTGCTCACAA | + |
|
Preference number: 6 (lower is better) Translates to: ASFSFFSLMLSA*TVSRRALKCSQ Trigger: TTGTGAGCACTTTAAAGCCCGCCTGGAAACCGTGCAGGCCGACAACATAAGAGAGAAGAAGGAGAAACTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS GCA 72 bp | GGTACACGCTGCTGCTCCCATTTCTGTACAATACTCTaGCTGCTGCAGGAGTTGCTGCTTCGCTTCATTCAA | + |
|
Preference number: 6 (lower is better) Translates to: GTRCCSHFCTIL*LLQELLLRFIQ Trigger: TTGAATGAAGCGAAGCAGCAACTCCTGCAGCAGGCAGAGTATTGTACAGAAATGGGAGCAGCAGCGTGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS CAA 72 bp | TGTCGAAGAGCCAGTTTCTCCTTCTTCTCTCTTATGTaGTCGGCCTGCACGGTTTCCAGGCGGGCTTTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: CRRASFSFFSLM*SACTVSRRALK Trigger: CTTTAAAGCCCGCCTGGAAACCGTGCAGGCCGACAACATAAGAGAGAAGAAGGAGAAACTGGCTCTTCGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS GCA 72 bp | TTGGTACACTGTCCTGGCTTCAAGTCTCCCAGAAGCTaGAATATGGTGTCCAAGAGCACCCGGCTTGAATTA | + |
|
Preference number: 6 (lower is better) Translates to: LVHCPGFKSPRS*NMVSKSTRLEL Trigger: TAATTCAAGCCGGGTGCTCTTGGACACCATATTGCAGCTTCTGGGAGACTTGAAGCCAGGACAGTGTACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291560.7 |
||
| CDS GCA 72 bp | ATTTCTGTACAATACTCTGCCTGCTGCAGGAGTTGCTaGTTCGCTTCATTCAACTGCTGTCGAAGAGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ISVQYSACCRSC*FASFNCCRRAS Trigger: ACTGGCTCTTCGACAGCAGTTGAATGAAGCGAAGCAGCAACTCCTGCAGCAGGCAGAGTATTGTACAGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS TCA 72 bp | CAGAAGCTGCAATATGGTGTCCAAGAGCACCCGGCTTaGATTAACCAAGAATTCACGACCACATGCTATAGC | + |
|
Preference number: 6 (lower is better) Translates to: QKLQYGVQEHPA*INQEFTTTCYS Trigger: GCTATAGCATGTGGTCGTGAATTCTTGGTTAATTCAAGCCGGGTGCTCTTGGACACCATATTGCAGCTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS CCA 72 bp | TCTGGAAGCTCTCCAGCACCTCCCCATTTAGTATTCTaGGTAAGAAGTCCCGTATTTGCATCACTTCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SGSSPAPPHLVF*VRSPVFASLQL Trigger: CAACTGAAGTGATGCAAATACGGGACTTCTTACCCAGAATACTAAATGGGGAGGTGCTGGAGAGCTTCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS GCA 72 bp | TCCCCATTTAGTATTCTGGGTAAGAAGTCCCGTATTTaGATCACTTCAGTTGTCAGCCGTTCCAGATCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SPFSILGKKSRI*ITSVVSRSRSF Trigger: GAAGGATCTGGAACGGCTGACAACTGAAGTGATGCAAATACGGGACTTCTTACCCAGAATACTAAATGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291560.7 ENST00000443485.1 |
||
| CDS CCA 72 bp | ATCACTCAAAAGCCACCACAGCAAAGGGATGAATCCTaGACTCTCGCTGATGTATTTCAAGCCTTTCAAATT | + |
|
Preference number: 6 (lower is better) Translates to: ITQKPPQQRDES*TLADVFQAFQI Trigger: AATTTGAAAGGCTTGAAATACATCAGCGAGAGTCCAGGATTCATCCCTTTGCTGTGGTGGCTTTTGAGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291560.7 |
||
| CDS CAA 90 bp | GGGATGAATCCTGGACTCTCGCTGATGTATTTCAAGCCTTTCAAATaGATGCTTACATTGTATAGGGACATCAGCATTAGCACTTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GMNPGLSLMYFKPFK*MLTLYRDISISTLS Trigger: ACTCAAAGTGCTAATGCTGATGTCCCTATACAATGTAAGCATCAATTTGAAAGGCTTGAAATACATCAGCGAGAGTCCAGGATTCATCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291560.7 |
||
| CDS CAA 90 bp | GGACTCTCGCTGATGTATTTCAAGCCTTTCAAATTGATGCTTACATaGTATAGGGACATCAGCATTAGCACTTTGAGTTTGGTACACTGT | + |
|
Preference number: 6 (lower is better) Translates to: GLSLMYFKPFKLMLT*YRDISISTLSLVHC Trigger: ACAGTGTACCAAACTCAAAGTGCTAATGCTGATGTCCCTATACAATGTAAGCATCAATTTGAAAGGCTTGAAATACATCAGCGAGAGTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291560.7 |
||
| CDS TCA 72 bp | TCACCGTCTAACGACTTCACAAAACTCTCCATTGTTTaGCCAGTGATGCTGAAAAACTTCAAAGCTTTATCC | + |
|
Preference number: 6 (lower is better) Translates to: SPSNDFTKLSIV*PVMLKNFKALS Trigger: GGATAAAGCTTTGAAGTTTTTCAGCATCACTGGTCAAACAATGGAGAGTTTTGTGAAGTCGTTAGACGGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443485.1 |
||
| CDS TCA 72 bp | TCACCGTCTAACGACTTCACAAAACTCTCCATTGTTTaGCCAGTGATGCTGAAAAACTTCAAAGCTTTATCT | + |
|
Preference number: 6 (lower is better) Translates to: SPSNDFTKLSIV*PVMLKNFKALS Trigger: AGATAAAGCTTTGAAGTTTTTCAGCATCACTGGTCAAACAATGGAGAGTTTTGTGAAGTCGTTAGACGGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000291560.7 |
||