Pregenerated sensors for HSF2 (Homo sapiens)
Ensembl gene IDs: ENSG00000025156Ensembl transcript IDs: ENST00000368455.9, ENST00000452194.5
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGGCTCACTCCATCCCATCCCACCCCCGATCTTTCTATATATATaGAGCTGGAACCCTATCAGACAGCGAGCATTCACGTACACTTTG | + |
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Preference number: 1 (lower is better) Translates to: WGSLHPIPPPIFLYI*SWNPIRQRAFTYTL Trigger: CAAAGTGTACGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGGGGGTGGGATGGGATGGAGTGAGCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| 3UTR CCA 90 bp | TCACTCCATCCCATCCCACCCCCGATCTTTCTATATATATGGAGCTaGAACCCTATCAGACAGCGAGCATTCACGTACACTTTGTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: SLHPIPPPIFLYIWS*NPIRQRAFTYTLSF Trigger: GAAAGACAAAGTGTACGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGGGGGTGGGATGGGATGGAGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| 3UTR-3UTR TCA 90 bp | CTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGTACACTTTGCAGCTGAGTAACACCTaGAAGCTCTGCAAGAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LYIWSWNPIRQRAFTYTLQLSNT*KLCKSV Trigger: CACACTCTTGCAGAGCTTTCAGGTGTTACTCAGCTG...CAAAGTGTACGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| 3UTR-3UTR TCA 90 bp | GATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGTACAGCTGAGTAACACCTaGAAGCTCTGCAAGAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: DLSIYMELEPYQTASIHVQLSNT*KLCKSV Trigger: CACACTCTTGCAGAGCTTTCAGGTGTTACTCAGCTG...TACGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| 3UTR-3UTR GCA 90 bp | CTAACTGGATGGGGCTCACTCCATCCCATCCCACCCCCGATCTTTCTATATATAAATGTGCATTACATCTaGGTAACTATGCAGCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: LTGWGSLHPIPPPIFLYINVHYI*VTMQLS Trigger: ACTCAGCTGCATAGTTACGCAGATGTAATGCACATT...TATATATAGAAAGATCGGGGGTGGGATGGGATGGAGTGAGCCCCATCCAGTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| 3UTR-3UTR GCA 90 bp | TCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGTACAAATGTGCATTACATCTaGGTAACTATGCAGCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: SFYIYGAGTLSDSEHSRTNVHYI*VTMQLS Trigger: ACTCAGCTGCATAGTTACGCAGATGTAATGCACATT...TGTACGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| 3UTR TCA 72 bp | CATTACATCTGCGTAACTATGCAGCTGAGTAACACCTaGAAGCTCTGCAAGAGTGTGTGGTTAGTGAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: HYICVTMQLSNT*KLCKSVWLVRK Trigger: TTTTCTCACTAACCACACACTCTTGCAGAGCTTTCAGGTGTTACTCAGCTGCATAGTTACGCAGATGTAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR TCA 90 bp | CTAACTGGATGGGGCTCACTCCATCCCATCCCACCCCCGATCTTTCTATATATACAGCTGAGTAACACCTaGAAGCTCTGCAAGAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: LTGWGSLHPIPPPIFLYIQLSNT*KLCKSV Trigger: CACACTCTTGCAGAGCTTTCAGGTGTTACTCAGCTG...TATATATAGAAAGATCGGGGGTGGGATGGGATGGAGTGAGCCCCATCCAGTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | CTAACTGGATGGGGCTCACTCCATCCCATCCCACCCCCGATCTTTCTATATATAACTAGTCCAACTAACTaGATGGGGCTCACTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: LTGWGSLHPIPPPIFLYITSPTN*MGLTPS Trigger: GGATGGAGTGAGCCCCATCCAGTTAGTTGGACTAGT...TATATATAGAAAGATCGGGGGTGGGATGGGATGGAGTGAGCCCCATCCAGTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR GCA 90 bp | CCCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGGCACGTTCGAACTCTaGTTCATTGTTAACGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: PDLSIYMELEPYQTASIHGTFEL*FIVNAA Trigger: CGCCGCGTTAACAATGAAGCAGAGTTCGAACGTGCC...GTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR GCA 90 bp | CTAACTGGATGGGGCTCACTCCATCCCATCCCACCCCCGATCTTTCTATATATAGTTCTGGGTCTAGGCTaGTATCCAGAAGCTCATCAA | + |
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Preference number: 4 (lower is better) Translates to: LTGWGSLHPIPPPIFLYIVLGLG*YPEAHQ Trigger: TTGATGAGCTTCTGGATAGCAGCCTAGACCCAGAAC...TATATATAGAAAGATCGGGGGTGGGATGGGATGGAGTGAGCCCCATCCAGTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | CCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGGTCCAACTAACTGGATaGGGCTCACTCCATCCCATC | + |
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Preference number: 4 (lower is better) Translates to: PIFLYIWSWNPIRQRAFTVQLTG*GSLHPI Trigger: GATGGGATGGAGTGAGCCCCATCCAGTTAGTTGGAC...CGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | CTAACTGGATGGGGCTCACTCCATCCCATCCCACCCCCGATCTTTCTATATATAGGAAAGGCGGTATACTaGATAAGCTGCTTATCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LTGWGSLHPIPPPIFLYIGKAVY*ISCLSG Trigger: ACCAGATAAGCAGCTTATCCAGTATACCGCCTTTCC...TATATATAGAAAGATCGGGGGTGGGATGGGATGGAGTGAGCCCCATCCAGTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | CCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGACTAGTCCAACTAACTaGATGGGGCTCACTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: PIFLYIWSWNPIRQRAFTTSPTN*MGLTPS Trigger: GGATGGAGTGAGCCCCATCCAGTTAGTTGGACTAGT...CGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR GCA 90 bp | TCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGTACAGGCACGTTCGAACTCTaGTTCATTGTTAACGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: SFYIYGAGTLSDSEHSRTGTFEL*FIVNAA Trigger: CGCCGCGTTAACAATGAAGCAGAGTTCGAACGTGCC...TGTACGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR GCA 90 bp | CCCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGTTCTGGGTCTAGGCTaGTATCCAGAAGCTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: PDLSIYMELEPYQTASIHVLGLG*YPEAHQ Trigger: TTGATGAGCTTCTGGATAGCAGCCTAGACCCAGAAC...GTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | CCCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACAAACTTTGGCCATTCTaGCTCCAGGTGATGAACTCG | + |
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Preference number: 4 (lower is better) Translates to: PDLSIYMELEPYQTASIHKLWPF*LQVMNS Trigger: CGAGTTCATCACCTGGAGCCAGAATGGCCAAAGTTT...GTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | CCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGGTCTTCCTGATAGCATaGCCTGGAAGTCCTCTAAAC | + |
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Preference number: 4 (lower is better) Translates to: PIFLYIWSWNPIRQRAFTVFLIA*PGSPLN Trigger: GTTTAGAGGACTTCCAGGCCATGCTATCAGGAAGAC...CGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | CCCCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGAACAAGCTTACTTTaGGTTGGTTCTGGGTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: PRSFYIYGAGTLSDSEHSRTSLL*VGSGSR Trigger: CCTAGACCCAGAACCAACCCAAAGTAAGCTTGTTCG...TGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | TCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGTACAGTCCAACTAACTGGATaGGGCTCACTCCATCCCATC | + |
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Preference number: 4 (lower is better) Translates to: SFYIYGAGTLSDSEHSRTVQLTG*GSLHPI Trigger: GATGGGATGGAGTGAGCCCCATCCAGTTAGTTGGAC...TGTACGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | CCCCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCAACAATATCAGGGTACTaGCTACAGTTGGAGGGATCA | + |
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Preference number: 4 (lower is better) Translates to: PRSFYIYGAGTLSDSEHSTISGY*LQLEGS Trigger: TGATCCCTCCAACTGTAGCCAGTACCCTGATATTGT...TGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | GATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGTAGTCTTCCTGATAGCATaGCCTGGAAGTCCTCTAAAC | + |
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Preference number: 4 (lower is better) Translates to: DLSIYMELEPYQTASIHVVFLIA*PGSPLN Trigger: GTTTAGAGGACTTCCAGGCCATGCTATCAGGAAGAC...TACGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | TCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGTACATTCAGCTTCAGTCAATaGCTCCAGGCGAACAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: SFYIYGAGTLSDSEHSRTFSFSQ*LQANKL Trigger: AAGCTTGTTCGCCTGGAGCCATTGACTGAAGCTGAA...TGTACGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | GATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGTATTCAGCTTCAGTCAATaGCTCCAGGCGAACAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: DLSIYMELEPYQTASIHVFSFSQ*LQANKL Trigger: AAGCTTGTTCGCCTGGAGCCATTGACTGAAGCTGAA...TACGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | CTAACTGGATGGGGCTCACTCCATCCCATCCCACCCCCGATCTTTCTATATATAGTAAAGTCCACTTCCTaGGGATTTAGCTATCTAAAA | + |
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Preference number: 4 (lower is better) Translates to: LTGWGSLHPIPPPIFLYIVKSTS*GFSYLK Trigger: TTTTAGATAGCTAAATCCCCAGGAAGTGGACTTTAC...TATATATAGAAAGATCGGGGGTGGGATGGGATGGAGTGAGCCCCATCCAGTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | CCCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACCTATATATATGGAGCTaGAACCCTATCAGACAGCGA | + |
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Preference number: 4 (lower is better) Translates to: PDLSIYMELEPYQTASIHLYIWS*NPIRQR Trigger: TCGCTGTCTGATAGGGTTCCAGCTCCATATATATAG...GTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR GCA 90 bp | CCCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACTCTGTGGGATTCATCTaGACAGAACTAGTGAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: PDLSIYMELEPYQTASIHSVGFI*TELVKR Trigger: TCTTTTCACTAGTTCTGTGCAGATGAATCCCACAGA...GTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368455.9 |
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| CDS-3UTR GCA 90 bp | CTAACTGGATGGGGCTCACTCCATCCCATCCCACCCCCGATCTTTCTATATATAGTATACTGGATAAGCTaGTTATCTGGTTTGGATTTA | + |
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Preference number: 4 (lower is better) Translates to: LTGWGSLHPIPPPIFLYIVYWIS*LSGLDL Trigger: TAAATCCAAACCAGATAAGCAGCTTATCCAGTATAC...TATATATAGAAAGATCGGGGGTGGGATGGGATGGAGTGAGCCCCATCCAGTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | GATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGTAGGAAAGGCGGTATACTaGATAAGCTGCTTATCTGGT | + |
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Preference number: 4 (lower is better) Translates to: DLSIYMELEPYQTASIHVGKAVY*ISCLSG Trigger: ACCAGATAAGCAGCTTATCCAGTATACCGCCTTTCC...TACGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | CCCCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCAGTAAAGTCCACTTCCTaGGGATTTAGCTATCTAAAA | + |
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Preference number: 4 (lower is better) Translates to: PRSFYIYGAGTLSDSEHSVKSTS*GFSYLK Trigger: TTTTAGATAGCTAAATCCCCAGGAAGTGGACTTTAC...TGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR GCA 90 bp | CCCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGTATACTGGATAAGCTaGTTATCTGGTTTGGATTTA | + |
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Preference number: 4 (lower is better) Translates to: PDLSIYMELEPYQTASIHVYWIS*LSGLDL Trigger: TAAATCCAAACCAGATAAGCAGCTTATCCAGTATAC...GTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR GCA 90 bp | GATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGTAAATGTGCATTACATCTaGGTAACTATGCAGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: DLSIYMELEPYQTASIHVNVHYI*VTMQLS Trigger: ACTCAGCTGCATAGTTACGCAGATGTAATGCACATT...TACGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | CTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGTACACTTTGAACAGGTTCTTCTTTTaGGCTCCATTAGTGTTTAGA | + |
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Preference number: 4 (lower is better) Translates to: LYIWSWNPIRQRAFTYTLNRFFF*APLVFR Trigger: TCTAAACACTAATGGAGCCCAAAAGAAGAACCTGTT...CAAAGTGTACGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | CCCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACTTCAGTCCTACTGTGTaGAACTTTATGATGATGATT | + |
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Preference number: 4 (lower is better) Translates to: PDLSIYMELEPYQTASIHFSPTV*NFMMMI Trigger: AATCATCATCATAAAGTTCCACACAGTAGGACTGAA...GTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | CCCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACATCTTTCTATATATATaGAGCTGGAACCCTATCAGA | + |
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Preference number: 4 (lower is better) Translates to: PDLSIYMELEPYQTASIHIFLYI*SWNPIR Trigger: TCTGATAGGGTTCCAGCTCCATATATATAGAAAGAT...GTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | ATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGTACTTCAGTCCTACTGTGTaGAACTTTATGATGATGATT | + |
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Preference number: 4 (lower is better) Translates to: IFLYIWSWNPIRQRAFTYFSPTV*NFMMMI Trigger: AATCATCATCATAAAGTTCCACACAGTAGGACTGAA...GTACGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CCA 90 bp | GATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGTAATCTTTCTATATATATaGAGCTGGAACCCTATCAGA | + |
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Preference number: 4 (lower is better) Translates to: DLSIYMELEPYQTASIHVIFLYI*SWNPIR Trigger: TCTGATAGGGTTCCAGCTCCATATATATAGAAAGAT...TACGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS CCA 90 bp | CTAGCTTCAGCTTCAGTCAATGGCTCCAGGCGAACAAGCTTACTTTaGGTTGGTTCTGGGTCTAGGCTGCTATCCAGAAGCTCATCAACT | + |
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Preference number: 5 (lower is better) Translates to: LASASVNGSRRTSLL*VGSGSRLLSRSSST Trigger: AGTTGATGAGCTTCTGGATAGCAGCCTAGACCCAGAACCAACCCAAAGTAAGCTTGTTCGCCTGGAGCCATTGACTGAAGCTGAAGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS GCA 90 bp | GCTCCAGGCGAACAAGCTTACTTTGGGTTGGTTCTGGGTCTAGGCTaGTATCCAGAAGCTCATCAACTTCTATGGGTTTATCTACAGAGG | + |
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Preference number: 5 (lower is better) Translates to: APGEQAYFGLVLGLG*YPEAHQLLWVYLQR Trigger: CCTCTGTAGATAAACCCATAGAAGTTGATGAGCTTCTGGATAGCAGCCTAGACCCAGAACCAACCCAAAGTAAGCTTGTTCGCCTGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CAA 90 bp | CCCCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCATCGAACTCTGCTTCATaGTTAACGCGGCGCAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: PRSFYIYGAGTLSDSEHSSNSAS*LTRRRD Trigger: ATCCCTGCGCCGCGTTAACAATGAAGCAGAGTTCGA...TGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CAA 90 bp | CCCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACTCGAACTCTGCTTCATaGTTAACGCGGCGCAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: PDLSIYMELEPYQTASIHSNSAS*LTRRRD Trigger: ATCCCTGCGCCGCGTTAACAATGAAGCAGAGTTCGA...GTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CAA 90 bp | CTAACTGGATGGGGCTCACTCCATCCCATCCCACCCCCGATCTTTCTATATATAGGGTACTGGCTACAGTaGGAGGGATCAGATATAACA | + |
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Preference number: 5 (lower is better) Translates to: LTGWGSLHPIPPPIFLYIGYWLQ*EGSDIT Trigger: TGTTATATCTGATCCCTCCAACTGTAGCCAGTACCC...TATATATAGAAAGATCGGGGGTGGGATGGGATGGAGTGAGCCCCATCCAGTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CAA 90 bp | CCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGCAAGCTTACTTTGGGTaGGTTCTGGGTCTAGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: PIFLYIWSWNPIRQRAFTQAYFG*VLGLGC Trigger: GCAGCCTAGACCCAGAACCAACCCAAAGTAAGCTTG...CGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CAA 90 bp | CCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGGGGTACTGGCTACAGTaGGAGGGATCAGATATAACA | + |
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Preference number: 5 (lower is better) Translates to: PIFLYIWSWNPIRQRAFTGYWLQ*EGSDIT Trigger: TGTTATATCTGATCCCTCCAACTGTAGCCAGTACCC...CGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CAA 90 bp | CCCCGATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCAGCATTCACGTACACTTaGTCTTTCCTGTTGAACATG | + |
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Preference number: 5 (lower is better) Translates to: PRSFYIYGAGTLSDSEHSAFTYT*SFLLNM Trigger: CATGTTCAACAGGAAAGACAAAGTGTACGTGAATGC...TGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGATCGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS-3UTR CAA 90 bp | ATCTTTCTATATATATGGAGCTGGAACCCTATCAGACAGCGAGCATTCACGTACGCATTCACGTACACTTaGTCTTTCCTGTTGAACATG | + |
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Preference number: 5 (lower is better) Translates to: IFLYIWSWNPIRQRAFTYAFTYT*SFLLNM Trigger: CATGTTCAACAGGAAAGACAAAGTGTACGTGAATGC...GTACGTGAATGCTCGCTGTCTGATAGGGTTCCAGCTCCATATATATAGAAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS CCA 72 bp | GCTTCAGTCAATGGCTCCAGGCGAACAAGCTTACTTTaGGTTGGTTCTGGGTCTAGGCTGCTATCCAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: ASVNGSRRTSLL*VGSGSRLLSRS Trigger: GCTTCTGGATAGCAGCCTAGACCCAGAACCAACCCAAAGTAAGCTTGTTCGCCTGGAGCCATTGACTGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS CAA 72 bp | CAGTCAATGGCTCCAGGCGAACAAGCTTACTTTGGGTaGGTTCTGGGTCTAGGCTGCTATCCAGAAGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: QSMAPGEQAYFG*VLGLGCYPEAH Trigger: ATGAGCTTCTGGATAGCAGCCTAGACCCAGAACCAACCCAAAGTAAGCTTGTTCGCCTGGAGCCATTGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS CAA 90 bp | CTTCAGCTTCAGTCAATGGCTCCAGGCGAACAAGCTTACTTTGGGTaGGTTCTGGGTCTAGGCTGCTATCCAGAAGCTCATCAACTTCTA | + |
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Preference number: 6 (lower is better) Translates to: LQLQSMAPGEQAYFG*VLGLGCYPEAHQLL Trigger: TAGAAGTTGATGAGCTTCTGGATAGCAGCCTAGACCCAGAACCAACCCAAAGTAAGCTTGTTCGCCTGGAGCCATTGACTGAAGCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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| CDS GCA 72 bp | GAACAAGCTTACTTTGGGTTGGTTCTGGGTCTAGGCTaGTATCCAGAAGCTCATCAACTTCTATGGGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: EQAYFGLVLGLG*YPEAHQLLWVY Trigger: ATAAACCCATAGAAGTTGATGAGCTTCTGGATAGCAGCCTAGACCCAGAACCAACCCAAAGTAAGCTTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368455.9 ENST00000452194.5 |
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