RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HSD3B7 (Homo sapiens)

Ensembl gene IDs: ENSG00000099377

Ensembl transcript IDs: ENST00000262520.10, ENST00000297679.10, ENST00000562932.5, ENST00000574447.1

Found 230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTaGATGTGCTGTATCTGGGCCTCCAGGCCCCAGCCCCACCGTCAC +
Preference number: 1 (lower is better)
Translates to: AAVPSRPGCEGSGPG*MCCIWASRPQPHRH
Trigger: GTGACGGTGGGGCTGGGGCCTGGAGGCCCAGATACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262520.10
3UTR TCA 90 bp GTGCGTAGAGCACCAGTGGCCGCAGCAGCCACTGCAGCAGGGCATTaGGGGCAGCCAGGAACACCAGCAGCCAGTAGGGCAGCAATGGGC +
Preference number: 1 (lower is better)
Translates to: VRRAPVAAAATAAGH*GQPGTPAASRAAMG
Trigger: GCCCATTGCTGCCCTACTGGCTGCTGGTGTTCCTGGCTGCCCTCAATGCCCTGCTGCAGTGGCTGCTGCGGCCACTGGTGCTCTACGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
3UTR GCA 90 bp GAAGGTGGTGTTGGCCACGGCCAGCGTGTAGGGGTTCAGCAGGGGTaGGTAGAGCACCAGTGGCCGCAGCAGCCACTGCAGCAGGGCATT +
Preference number: 1 (lower is better)
Translates to: EGGVGHGQRVGVQQG*VEHQWPQQPLQQGI
Trigger: AATGCCCTGCTGCAGTGGCTGCTGCGGCCACTGGTGCTCTACGCACCCCTGCTGAACCCCTACACGCTGGCCGTGGCCAACACCACCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262520.10
3UTR CCA 90 bp GGAGGAACCAGAGCCGCCTCTGCACTCTGCACCGAGGGTCGCGTGTaGCTGTCAGGAGAGCAGCGTAAGCCTGTGGAGCCTCTGCTCGCT +
Preference number: 1 (lower is better)
Translates to: GGTRAASALCTEGRV*LSGEQRKPVEPLLA
Trigger: AGCGAGCAGAGGCTCCACAGGCTTACGCTGCTCTCCTGACAGCCACACGCGACCCTCGGTGCAGAGTGCAGAGGCGGCTCTGGTTCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
3UTR GCA 90 bp GCTCTACGACAAGGACAGCCATTCTGGCCCCAGAGCCCTGCCTCCTaGTCTGGAATGCAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCT +
Preference number: 1 (lower is better)
Translates to: ALRQGQPFWPQSPAS*SGMQLSLPVQGVRA
Trigger: AGCCCTCACACCCTGGACGGGAAGGGACAGCTGCATTCCAGAGCAGGAGGCAGGGCTCTGGGGCCAGAATGGCTGTCCTTGTCGTAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
3UTR CCA 90 bp GCAGGCCACCAGGGCACCAGACACTCACCAAGCGGCCATCAGGACTaGGATGAGAGGACAGAGGAAGGACACTCTGTCCCCAAACCCTCC +
Preference number: 1 (lower is better)
Translates to: AGHQGTRHSPSGHQD*DERTEEGHSVPKPS
Trigger: GGAGGGTTTGGGGACAGAGTGTCCTTCCTCTGTCCTCTCATCCCAGTCCTGATGGCCGCTTGGTGAGTGTCTGGTGCCCTGGTGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
3UTR CCA 90 bp TGTGGAGCCTCTGCTCGCTTCCTGCTCAGAAAGCCAGAAGAGAGCTaGGGCAGGCCACCAGGGCACCAGACACTCACCAAGCGGCCATCA +
Preference number: 1 (lower is better)
Translates to: CGASARFLLRKPEES*GRPPGHQTLTKRPS
Trigger: TGATGGCCGCTTGGTGAGTGTCTGGTGCCCTGGTGGCCTGCCCCAGCTCTCTTCTGGCTTTCTGAGCAGGAAGCGAGCAGAGGCTCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
3UTR CCA 90 bp ACACTCTGTCCCCAAACCCTCCCGTGTCCTGACGGCCCTAGAACTTaGAGGTGTCAGGACACAACACAGACTCAAGGCTCCTGGATTGAA +
Preference number: 1 (lower is better)
Translates to: TLCPQTLPCPDGPRT*RCQDTTQTQGSWIE
Trigger: TTCAATCCAGGAGCCTTGAGTCTGTGTTGTGTCCTGACACCTCCAAGTTCTAGGGCCGTCAGGACACGGGAGGGTTTGGGGACAGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
3UTR-3UTR CCA 90 bp AGCCTGTGGAGCCTCTGCTCGCTTCCTGCTCAGAAAGCCAGAAGAGAGCTGGGGCCAGTAGGGCAGCAATaGGCGGGCGCCCACCAGCCG +
Preference number: 2 (lower is better)
Translates to: SLWSLCSLPAQKARRELGPVGQQ*AGAHQP
Trigger: CGGCTGGTGGGCGCCCGCCCATTGCTGCCCTACTGG...CCCCAGCTCTCTTCTGGCTTTCTGAGCAGGAAGCGAGCAGAGGCTCCACAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
3UTR-3UTR GCA 90 bp GTGGAGCCTCTGCTCGCTTCCTGCTCAGAAAGCCAGAAGAGAGCTGGGGCAGGCCAGAGCCCTGCCTCCTaGTCTGGAATGCAGCTGTCC +
Preference number: 2 (lower is better)
Translates to: VEPLLASCSESQKRAGAGQSPAS*SGMQLS
Trigger: GGACAGCTGCATTCCAGAGCAGGAGGCAGGGCTCTG...GCCTGCCCCAGCTCTCTTCTGGCTTTCTGAGCAGGAAGCGAGCAGAGGCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
3UTR-3UTR CCA 90 bp AGCCTGTGGAGCCTCTGCTCGCTTCCTGCTCAGAAAGCCAGAAGAGAGCTGGGGTGCGTAGAGCACCAGTaGCCGCAGCAGCCACTGCAG +
Preference number: 2 (lower is better)
Translates to: SLWSLCSLPAQKARRELGCVEHQ*PQQPLQ
Trigger: CTGCAGTGGCTGCTGCGGCCACTGGTGCTCTACGCA...CCCCAGCTCTCTTCTGGCTTTCTGAGCAGGAAGCGAGCAGAGGCTCCACAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
3UTR-3UTR CCA 90 bp CACCAGGGCACCAGACACTCACCAAGCGGCCATCAGGACTGGGATGAGAGGACACAAGGACAGCCATTCTaGCCCCAGAGCCCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: HQGTRHSPSGHQDWDERTQGQPF*PQSPAS
Trigger: GGAGGCAGGGCTCTGGGGCCAGAATGGCTGTCCTTG...TGTCCTCTCATCCCAGTCCTGATGGCCGCTTGGTGAGTGTCTGGTGCCCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
3UTR-3UTR TCA 90 bp CACCAGGGCACCAGACACTCACCAAGCGGCCATCAGGACTGGGATGAGAGGACAGTAGCTCCTGTAGGGTaGTCCATCGTAGCAGAAGTA +
Preference number: 2 (lower is better)
Translates to: HQGTRHSPSGHQDWDERTVAPVG*SIVAEV
Trigger: TACTTCTGCTACGATGGATCACCCTACAGGAGCTAC...TGTCCTCTCATCCCAGTCCTGATGGCCGCTTGGTGAGTGTCTGGTGCCCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262520.10
3UTR-3UTR CCA 90 bp GCCACCAGGGCACCAGACACTCACCAAGCGGCCATCAGGACTGGGATGAGAGGAAAGAAAAAGAAAATGTaGAGGGCTCTACGACAAGGA +
Preference number: 2 (lower is better)
Translates to: ATRAPDTHQAAIRTGMRGKKKKM*RALRQG
Trigger: TCCTTGTCGTAGAGCCCTCCACATTTTCTTTTTCTT...TCCTCTCATCCCAGTCCTGATGGCCGCTTGGTGAGTGTCTGGTGCCCTGGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
3UTR-3UTR CCA 90 bp CAGAGGGGAATTCTAAGACAGACAGTTGAAGGTGAGGCCTTTGAAAAACAATGGGGCTCGGGACCTGGGTaGATGTGCTGTATCTGGGCC +
Preference number: 2 (lower is better)
Translates to: QRGILRQTVEGEAFEKQWGSGPG*MCCIWA
Trigger: GGCCCAGATACAGCACATCCACCCAGGTCCCGAGCC...CCATTGTTTTTCAAAGGCCTCACCTTCAACTGTCTGTCTTAGAATTCCCCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
3UTR-3UTR CCA 90 bp CAGAGGGGAATTCTAAGACAGACAGTTGAAGGTGAGGCCTTTGAAAAACAATGGCAAGGACAGCCATTCTaGCCCCAGAGCCCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: QRGILRQTVEGEAFEKQWQGQPF*PQSPAS
Trigger: GGAGGCAGGGCTCTGGGGCCAGAATGGCTGTCCTTG...CCATTGTTTTTCAAAGGCCTCACCTTCAACTGTCTGTCTTAGAATTCCCCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
3UTR-3UTR CCA 90 bp CACCAGGGCACCAGACACTCACCAAGCGGCCATCAGGACTGGGATGAGAGGACAAAGAAAAAGAAAATGTaGAGGGCTCTACGACAAGGA +
Preference number: 2 (lower is better)
Translates to: HQGTRHSPSGHQDWDERTKKKKM*RALRQG
Trigger: TCCTTGTCGTAGAGCCCTCCACATTTTCTTTTTCTT...TGTCCTCTCATCCCAGTCCTGATGGCCGCTTGGTGAGTGTCTGGTGCCCTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
3UTR-3UTR TCA 90 bp GGTGTCAGGACACAACACAGACTCAAGGCTCCTGGATTGAAAATGTGGAGGGCTCCAGGAACTCCATGTTaGAATCCTCGTAGCTCCTGT +
Preference number: 2 (lower is better)
Translates to: GVRTQHRLKAPGLKMWRAPGTPC*NPRSSC
Trigger: ACAGGAGCTACGAGGATTTCAACATGGAGTTCCTGG...AGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGTTGTGTCCTGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
3UTR-3UTR GCA 90 bp AGGGGAATTCTAAGACAGACAGTTGAAGGTGAGGCCTTTGAAAAACAATGGGAACAGAGCCCTGCCTCCTaGTCTGGAATGCAGCTGTCC +
Preference number: 2 (lower is better)
Translates to: RGILRQTVEGEAFEKQWEQSPAS*SGMQLS
Trigger: GGACAGCTGCATTCCAGAGCAGGAGGCAGGGCTCTG...TTCCCATTGTTTTTCAAAGGCCTCACCTTCAACTGTCTGTCTTAGAATTCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
3UTR TCA 72 bp CCAGCCGCAGTCCGCAGGGGCCCAGGAACTCCATGTTaGAATCCTCGTAGCTCCTGTAGGGTGATCCATCGT +
Preference number: 3 (lower is better)
Translates to: PAAVRRGPGTPC*NPRSSCRVIHR
Trigger: ACGATGGATCACCCTACAGGAGCTACGAGGATTTCAACATGGAGTTCCTGGGCCCCTGCGGACTGCGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
3UTR TCA 72 bp GTGTCAGGACACAACACAGACTCAAGGCTCCTGGATTaGAAATGTGGAGGGCTTGGGCCAGGCGCGGTGGCT +
Preference number: 3 (lower is better)
Translates to: VSGHNTDSRLLD*KCGGLGPGAVA
Trigger: AGCCACCGCGCCTGGCCCAAGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGTTGTGTCCTGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp TCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTATCTGGGCCGCCGCCCATCAGGGTTaGCCGCTGCTCCAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: SRPGCEGSGPGWMCCIWAAAHQG*PLLQLP
Trigger: CGGGAGCTGGAGCAGCGGGCAACCCTGATGGGCGGC...GGCCCAGATACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp CAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGCCGCTATCCCAGGGTaGCCAGACTGGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: QLSLPVQGVRARDLGGCAAAIPG*PDWPGG
Trigger: CCCTCCAGGCCAGTCTGGGCACCCTGGGATAGCGGC...AGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp TCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTATCTGGGCCCTGCTGGAGGTGCCCTaGAGCGGTGACGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SRPGCEGSGPGWMCCIWALLEVP*SGDEAG
Trigger: GCCAGCCTCGTCACCGCTCCAGGGCACCTCCAGCAG...GGCCCAGATACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR CCA 90 bp GCTCGGGACCTGGGTGGATGTGCTGTATCTGGGCCTCCAGGCCCCAGCCCCACCTCACGTCCCCCTGGATaGCAGTCACCCTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: ARDLGGCAVSGPPGPSPTSRPPG*QSPSQA
Trigger: GGCCTGTGAGGGTGACTGCCATCCAGGGGGACGTGA...GGTGGGGCTGGGGCCTGGAGGCCCAGATACAGCACATCCACCCAGGTCCCGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp TCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTATCTGGGCCGCTGCTGCCACCTCATaGGCCTGGGTCACGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SRPGCEGSGPGWMCCIWAAAATS*AWVTSP
Trigger: GGGGGACGTGACCCAGGCCCATGAGGTGGCAGCAGC...GGCCCAGATACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp CGCAGCAGCCACTGCAGCAGGGCATTGAGGGCAGCCAGGAACACCAGCAGCCAGCAGCCCCACCGTCACTaGGCTGAACCCGTAGCGGCC +
Preference number: 4 (lower is better)
Translates to: RSSHCSRALRAARNTSSQQPHRH*AEPVAA
Trigger: GGCCGCTACGGGTTCAGCCCAGTGACGGTGGGGCTG...CTGGCTGCTGGTGTTCCTGGCTGCCCTCAATGCCCTGCTGCAGTGGCTGCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR TCA 90 bp ATGCAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCCCAGCCGTGTGGATaGCCACATGGGCTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: MQLSLPVQGVRARDLGGCAQPCG*PHGLRP
Trigger: TGGCCGGAGCCCATGTGGTCATCCACACGGCTGGGC...ACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR TCA 90 bp GCTCGGGACCTGGGTGGATGTGCTGTATCTGGGCCTCCAGGCCCCAGCCCCACCACTGCAGCAGGGCATTaGGGGCAGCCAGGAACACCA +
Preference number: 4 (lower is better)
Translates to: ARDLGGCAVSGPPGPSPTTAAGH*GQPGTP
Trigger: TGGTGTTCCTGGCTGCCCTCAATGCCCTGCTGCAGT...GGTGGGGCTGGGGCCTGGAGGCCCAGATACAGCACATCCACCCAGGTCCCGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp ATGCAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGAGAGAGGGGCGGGCTaGAGCCGCTATCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: MQLSLPVQGVRARDLGGCERGAG*SRYPRV
Trigger: CACCCTGGGATAGCGGCTGCAGCCCGCCCCTCTCTC...ACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR GCA 90 bp GCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTTCCGGCCACAGCTGCTaGCACCTCATGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: AVPSRPGCEGSGPGWMCCSGHSC*HLMGLG
Trigger: ACCCAGGCCCATGAGGTGGCAGCAGCTGTGGCCGGA...ACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AACCAGAGCCGCCTCTGCACTCTGCACCGAGGGTCGCGTGTGGCTGTCAGGAGATCTTTCGTCCAGGGCTaGCCGGCCCGCACACCGTCC +
Preference number: 4 (lower is better)
Translates to: NQSRLCTLHRGSRVAVRRSFVQG*PARTPS
Trigger: GGACGGTGTGCGGGCCGGCCAGCCCTGGACGAAAGA...TCTCCTGACAGCCACACGCGACCCTCGGTGCAGAGTGCAGAGGCGGCTCTGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp GCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTGCCACCTCATGGGCCTaGGTCACGTCCCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: AVPSRPGCEGSGPGWMCCATSWA*VTSPWM
Trigger: CATCCAGGGGGACGTGACCCAGGCCCATGAGGTGGC...ACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp GCTCGGGACCTGGGTGGATGTGCTGTATCTGGGCCTCCAGGCCCCAGCCCCACCGTGTGGATGACCACATaGGCTCCGGCCACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ARDLGGCAVSGPPGPSPTVWMTT*APATAA
Trigger: AGCAGCTGTGGCCGGAGCCCATGTGGTCATCCACAC...GGTGGGGCTGGGGCCTGGAGGCCCAGATACAGCACATCCACCCAGGTCCCGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp GCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTCCACAGAGGCCGGGATaGCCCGGAAGAGCCAACCTC +
Preference number: 4 (lower is better)
Translates to: AVPSRPGCEGSGPGWMCCPQRPG*PGRANL
Trigger: GAGGTTGGCTCTTCCGGGCCATCCCGGCCTCTGTGG...ACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297679.10
CDS-3UTR TCA 90 bp GCTCGGGACCTGGGTGGATGTGCTGTATCTGGGCCTCCAGGCCCCAGCCCCACCGGGTACCCTGCACGTTaGCCTCATGGATGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: ARDLGGCAVSGPPGPSPTGYPAR*PHGWSW
Trigger: CCAAGACCATCCATGAGGTCAACGTGCAGGGTACCC...GGTGGGGCTGGGGCCTGGAGGCCCAGATACAGCACATCCACCCAGGTCCCGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp GTGGAGCCTCTGCTCGCTTCCTGCTCAGAAAGCCAGAAGAGAGCTGGGGCAGGCGCCGCTATCCCAGGGTaGCCAGACTGGCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: VEPLLASCSESQKRAGAGAAIPG*PDWPGG
Trigger: CCCTCCAGGCCAGTCTGGGCACCCTGGGATAGCGGC...GCCTGCCCCAGCTCTCTTCTGGCTTTCTGAGCAGGAAGCGAGCAGAGGCTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp GTGGAGCCTCTGCTCGCTTCCTGCTCAGAAAGCCAGAAGAGAGCTGGGGCAGGCAGCCGGGGCTCCCGCTaGAGCAGCATTCGCACCACG +
Preference number: 4 (lower is better)
Translates to: VEPLLASCSESQKRAGAGSRGSR*SSIRTT
Trigger: CGTGGTGCGAATGCTGCTGCAGCGGGAGCCCCGGCT...GCCTGCCCCAGCTCTCTTCTGGCTTTCTGAGCAGGAAGCGAGCAGAGGCTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp GCTGAACCCGTAGCGGCCTGTACCCAGAGAATGGTACGGGTCCGGCTATCCTCCCTCCAGCTCCCGGGCTaGCAGCACGTGCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: AEPVAACTQRMVRVRLSSLQLPG*QHVHPG
Trigger: GCCTGGATGCACGTGCTGGCAGCCCGGGAGCTGGAG...GGAGGATAGCCGGACCCGTACCATTCTCTGGGTACAGGCCGCTACGGGTTCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR GCA 90 bp GTGGAGCCTCTGCTCGCTTCCTGCTCAGAAAGCCAGAAGAGAGCTGGGGCAGGCATCAGGGTTGCCCGCTaGTCCAGCTCCCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VEPLLASCSESQKRAGAGIRVAR*SSSRAA
Trigger: GGCAGCCCGGGAGCTGGAGCAGCGGGCAACCCTGAT...GCCTGCCCCAGCTCTCTTCTGGCTTTCTGAGCAGGAAGCGAGCAGAGGCTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp CAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTAACCAGAGCCGCCTCTaGACTCTGCACCGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: QLSLPVQGVRARDLGGCANQSRL*TLHRGS
Trigger: CGACCCTCGGTGCAGAGTGCAGAGGCGGCTCTGGTT...AGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp CAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTATCTGGGCCTCCAGGCAACCAGAGCCGCCTCTaGACTCTGCACCGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: QGVRARDLGGCAVSGPPGNQSRL*TLHRGS
Trigger: CGACCCTCGGTGCAGAGTGCAGAGGCGGCTCTGGTT...GCCTGGAGGCCCAGATACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp ATGCAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGGCTCATCCAGGGGCTaGCTGCCACCTGCTGCAACC +
Preference number: 4 (lower is better)
Translates to: MQLSLPVQGVRARDLGGCGSSRG*LPPAAT
Trigger: GGTTGCAGCAGGTGGCAGCCAGCCCCTGGATGAGCC...ACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR CCA 90 bp AATGCAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGGCCACCTCATGGGCCTaGGTCACGTCCCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: NAAVPSRPGCEGSGPGWMATSWA*VTSPWM
Trigger: CATCCAGGGGGACGTGACCCAGGCCCATGAGGTGGC...CATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTGCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp CAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGGCTCGGGACCTGGGTaGATGTGCTGTATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QLSLPVQGVRARDLGGCAGSGPG*MCCIWA
Trigger: GGCCCAGATACAGCACATCCACCCAGGTCCCGAGCC...AGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp TCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTATCTGGGCCGGCTCGGGACCTGGGTaGATGTGCTGTATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SRPGCEGSGPGWMCCIWAGSGPG*MCCIWA
Trigger: GGCCCAGATACAGCACATCCACCCAGGTCCCGAGCC...GGCCCAGATACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AATGCAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGCCCCAGGCCCAGGGCTaGCGATGTGCTGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: NAAVPSRPGCEGSGPGWMPQAQG*RCAGKE
Trigger: TTCCTTCCCAGCACATCGCCAGCCCTGGGCCTGGGG...CATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTGCATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR TCA 90 bp ACACAGACTCAAGGCTCCTGGATTGAAAATGTGGAGGGCTTGGGCCAGGCGCGGGGTGCCCTGGAGCGGTaGCGAGGCTGGCGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: TQTQGSWIENVEGLGQARGALER*RGWRLR
Trigger: CCGCAAACGCCAGCCTCGTCACCGCTCCAGGGCACC...CCGCGCCTGGCCCAAGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR TCA 90 bp GTCCCCAAACCCTCCCGTGTCCTGACGGCCCTAGAACTTGGAGGTGTCAGGACAGCCCAGCCGTGTGGATaGCCACATGGGCTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: VPKPSRVLTALELGGVRTAQPCG*PHGLRP
Trigger: TGGCCGGAGCCCATGTGGTCATCCACACGGCTGGGC...TGTCCTGACACCTCCAAGTTCTAGGGCCGTCAGGACACGGGAGGGTTTGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp TCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTATCTGGGCCTGTTACTGCTGGAGGTaGCCTGGAGCGGTGACGAGG +
Preference number: 4 (lower is better)
Translates to: SRPGCEGSGPGWMCCIWACYCWR*PGAVTR
Trigger: CCTCGTCACCGCTCCAGGGCACCTCCAGCAGTAACA...GGCCCAGATACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR GCA 90 bp TCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTATCTGGGCCGGGCTGGCTGCCACCTaGTGCAACCACCTGTTACTG +
Preference number: 4 (lower is better)
Translates to: SRPGCEGSGPGWMCCIWAGLAAT*CNHLLL
Trigger: CAGTAACAGGTGGTTGCAGCAGGTGGCAGCCAGCCC...GGCCCAGATACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR GCA 90 bp CACCAGGGCACCAGACACTCACCAAGCGGCCATCAGGACTGGGATGAGAGGACAATCAGGGTTGCCCGCTaGTCCAGCTCCCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HQGTRHSPSGHQDWDERTIRVAR*SSSRAA
Trigger: GGCAGCCCGGGAGCTGGAGCAGCGGGCAACCCTGAT...TGTCCTCTCATCCCAGTCCTGATGGCCGCTTGGTGAGTGTCTGGTGCCCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp GTACCCAGAGAATGGTACGGGTCCGGCTATCCTCCCACGAGAACAGGGGCTCATGCCGCCCATCAGGGTTaGCCGCTGCTCCAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: VPREWYGSGYPPTRTGAHAAHQG*PLLQLP
Trigger: CGGGAGCTGGAGCAGCGGGCAACCCTGATGGGCGGC...ATGAGCCCCTGTTCTCGTGGGAGGATAGCCGGACCCGTACCATTCTCTGGGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR GCA 90 bp CAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTATCTGGGCCTCCAGGCCAGAGCCCTGCCTCCTaGTCTGGAATGCAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: QGVRARDLGGCAVSGPPGQSPAS*SGMQLS
Trigger: GGACAGCTGCATTCCAGAGCAGGAGGCAGGGCTCTG...GCCTGGAGGCCCAGATACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp AGCCTGTGGAGCCTCTGCTCGCTTCCTGCTCAGAAAGCCAGAAGAGAGCTGGGGGCCGCCTCTGCACTCTaGACCGAGGGTCGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: SLWSLCSLPAQKARRELGAASAL*TEGRVW
Trigger: CCACACGCGACCCTCGGTGCAGAGTGCAGAGGCGGC...CCCCAGCTCTCTTCTGGCTTTCTGAGCAGGAAGCGAGCAGAGGCTCCACAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp AATGCAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGCGGGCTGCCAGCACGTaGATCCAGGCAACATTGCCC +
Preference number: 4 (lower is better)
Translates to: NAAVPSRPGCEGSGPGWMRAAST*IQATLP
Trigger: GGGCAATGTTGCCTGGATGCACGTGCTGGCAGCCCG...CATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTGCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297679.10
CDS-3UTR CCA 90 bp AACCAGAGCCGCCTCTGCACTCTGCACCGAGGGTCGCGTGTGGCTGTCAGGAGAGTGCCCAGACTGGCCTaGAGGGGCCCTCTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: NQSRLCTLHRGSRVAVRRVPRLA*RGPLLS
Trigger: CGAAAGAAGAGGGCCCCTCCAGGCCAGTCTGGGCAC...TCTCCTGACAGCCACACGCGACCCTCGGTGCAGAGTGCAGAGGCGGCTCTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AATGCAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGGTGCCCAGACTGGCCTaGAGGGGCCCTCTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: NAAVPSRPGCEGSGPGWMVPRLA*RGPLLS
Trigger: CGAAAGAAGAGGGCCCCTCCAGGCCAGTCTGGGCAC...CATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTGCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp GCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTACCACCTGTTACTGCTaGAGGTGCCCTGGAGCGGTG +
Preference number: 4 (lower is better)
Translates to: AVPSRPGCEGSGPGWMCCTTCYC*RCPGAV
Trigger: CACCGCTCCAGGGCACCTCCAGCAGTAACAGGTGGT...ACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR CCA 90 bp GCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTCAGGGACCCAGGTGTTaGTCAAAGACCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AVPSRPGCEGSGPGWMCCQGPRC*SKTRSS
Trigger: GGAGCTGCGGGTCTTTGACCAACACCTGGGTCCCTG...ACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp GCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTTGGGTCACGTCCCCCTaGATGGCAGTCACCCTCACA +
Preference number: 4 (lower is better)
Translates to: AVPSRPGCEGSGPGWMCCWVTSP*MAVTLT
Trigger: TGTGAGGGTGACTGCCATCCAGGGGGACGTGACCCA...ACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp CAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTTTGCCTTCCTCCCGTTaGCCTCCAGGACCAGCCACT +
Preference number: 4 (lower is better)
Translates to: QLSLPVQGVRARDLGGCALPSSR*PPGPAT
Trigger: AGTGGCTGGTCCTGGAGGCCAACGGGAGGAAGGCAA...AGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR CCA 90 bp CAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTATCTGGGCCTCCAGGCAAAATGTGGAGGGCTTaGGCCAGGCGCGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: QGVRARDLGGCAVSGPPGKMWRA*ARRGGS
Trigger: TGAGCCACCGCGCCTGGCCCAAGCCCTCCACATTTT...GCCTGGAGGCCCAGATACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR TCA 90 bp GCCACCAGGGCACCAGACACTCACCAAGCGGCCATCAGGACTGGGATGAGAGGAGCCGTCTGCCCCTGCTaGTGGCTGAGTTACGGAGAG +
Preference number: 4 (lower is better)
Translates to: ATRAPDTHQAAIRTGMRGAVCPC*WLSYGE
Trigger: CTCTCCGTAACTCAGCCATCAGCAGGGGCAGACGGC...TCCTCTCATCCCAGTCCTGATGGCCGCTTGGTGAGTGTCTGGTGCCCTGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR TCA 90 bp AATGCAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGAGCCACAGCCCCCTGTaGCCAGGTACACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: NAAVPSRPGCEGSGPGWMSHSPL*PGTPAS
Trigger: AGAAGCTGGTGTACCTGGTCACAGGGGGCTGTGGCT...CATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTGCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR TCA 90 bp AATGCAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGACTGCAGCAGGGCATTaGGGGCAGCCAGGAACACCA +
Preference number: 4 (lower is better)
Translates to: NAAVPSRPGCEGSGPGWMTAAGH*GQPGTP
Trigger: TGGTGTTCCTGGCTGCCCTCAATGCCCTGCTGCAGT...CATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTGCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR TCA 90 bp CACCAGGGCACCAGACACTCACCAAGCGGCCATCAGGACTGGGATGAGAGGACACCACCGTCACTGGGCTaGACCCGTAGCGGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: HQGTRHSPSGHQDWDERTPPSLG*TRSGLY
Trigger: GTACAGGCCGCTACGGGTTCAGCCCAGTGACGGTGG...TGTCCTCTCATCCCAGTCCTGATGGCCGCTTGGTGAGTGTCTGGTGCCCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp GTGGAGCCTCTGCTCGCTTCCTGCTCAGAAAGCCAGAAGAGAGCTGGGGCAGGCAGCAACCAGGCCACCTaGCGTCTGCCCCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: VEPLLASCSESQKRAGAGSNQAT*RLPLLM
Trigger: CATCAGCAGGGGCAGACGGCAGGTGGCCTGGTTGCT...GCCTGCCCCAGCTCTCTTCTGGCTTTCTGAGCAGGAAGCGAGCAGAGGCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR GCA 90 bp TCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTATCTGGGCCAGCATTCGCACCACGTaGTCTCCCAGGAAGCCACAG +
Preference number: 4 (lower is better)
Translates to: SRPGCEGSGPGWMCCIWASIRTT*SPRKPQ
Trigger: CTGTGGCTTCCTGGGAGAGCACGTGGTGCGAATGCT...GGCCCAGATACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp GCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTGGGGTGCCTGTGCACTaGTTCGTATGGGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: AVPSRPGCEGSGPGWMCCGVPVH*FVWGVF
Trigger: GAAGACACCCCATACGAAGCAGTGCACAGGCACCCC...ACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp GTACCCAGAGAATGGTACGGGTCCGGCTATCCTCCCACGAGAACAGGGGCTCATGCCGCCTCTGCACTCTaGACCGAGGGTCGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: VPREWYGSGYPPTRTGAHAASAL*TEGRVW
Trigger: CCACACGCGACCCTCGGTGCAGAGTGCAGAGGCGGC...ATGAGCCCCTGTTCTCGTGGGAGGATAGCCGGACCCGTACCATTCTCTGGGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR CCA 90 bp GTACCCAGAGAATGGTACGGGTCCGGCTATCCTCCCACGAGAACAGGGGCTCATCCAGGGTGCCCAGACTaGCCTGGAGGGGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VPREWYGSGYPPTRTGAHPGCPD*PGGALF
Trigger: GAAGAGGGCCCCTCCAGGCCAGTCTGGGCACCCTGG...ATGAGCCCCTGTTCTCGTGGGAGGATAGCCGGACCCGTACCATTCTCTGGGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR CCA 90 bp AACCAGAGCCGCCTCTGCACTCTGCACCGAGGGTCGCGTGTGGCTGTCAGGAGATCGGCCATGCCTGGCTaGGGAAGAGACCTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: NQSRLCTLHRGSRVAVRRSAMPG*GRDLGS
Trigger: TGAGCCAAGGTCTCTTCCCCAGCCAGGCATGGCCGA...TCTCCTGACAGCCACACGCGACCCTCGGTGCAGAGTGCAGAGGCGGCTCTGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR CCA 90 bp AACCAGAGCCGCCTCTGCACTCTGCACCGAGGGTCGCGTGTGGCTGTCAGGAGAAGGTACACCAGCTTCTaGGCCTGTGCAGAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: NQSRLCTLHRGSRVAVRRRYTSF*ACAESA
Trigger: GGCCGACTCTGCACAGGCCCAGAAGCTGGTGTACCT...TCTCCTGACAGCCACACGCGACCCTCGGTGCAGAGTGCAGAGGCGGCTCTGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp GCGGTGGCTCACACTTGTAGTTCCAGCGTTTTGGGAGGCCCACGTGGGAAGATCGCTGCTGCCACCTCATaGGCCTGGGTCACGTCCCCC +
Preference number: 4 (lower is better)
Translates to: AVAHTCSSSVLGGPRGKIAAATS*AWVTSP
Trigger: GGGGGACGTGACCCAGGCCCATGAGGTGGCAGCAGC...GATCTTCCCACGTGGGCCTCCCAAAACGCTGGAACTACAAGTGTGAGCCACCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp GCCACCAGGGCACCAGACACTCACCAAGCGGCCATCAGGACTGGGATGAGAGGAACCAGCCCAGCCGTGTaGATGACCACATGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: ATRAPDTHQAAIRTGMRGTSPAV*MTTWAP
Trigger: CGGAGCCCATGTGGTCATCCACACGGCTGGGCTGGT...TCCTCTCATCCCAGTCCTGATGGCCGCTTGGTGAGTGTCTGGTGCCCTGGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp GCTGAACCCGTAGCGGCCTGTACCCAGAGAATGGTACGGGTCCGGCTATCCTCCTGCGTAGAGCACCAGTaGCCGCAGCAGCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: AEPVAACTQRMVRVRLSSCVEHQ*PQQPLQ
Trigger: CTGCAGTGGCTGCTGCGGCCACTGGTGCTCTACGCA...GGAGGATAGCCGGACCCGTACCATTCTCTGGGTACAGGCCGCTACGGGTTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR CCA 90 bp ATGCAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTAAAATGTGGAGGGCTTaGGCCAGGCGCGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: MQLSLPVQGVRARDLGGCKMWRA*ARRGGS
Trigger: TGAGCCACCGCGCCTGGCCCAAGCCCTCCACATTTT...ACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp CAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTCCTGGATTGAAAATGTaGAGGGCTTGGGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: QLSLPVQGVRARDLGGCAPGLKM*RAWARR
Trigger: GCGCCTGGCCCAAGCCCTCCACATTTTCAATCCAGG...AGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR TCA 90 bp GCTCGGGACCTGGGTGGATGTGCTGTATCTGGGCCTCCAGGCCCCAGCCCCACCGTAGCTCCTGTAGGGTaGTCCATCGTAGCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: ARDLGGCAVSGPPGPSPTVAPVG*SIVAEV
Trigger: TACTTCTGCTACGATGGATCACCCTACAGGAGCTAC...GGTGGGGCTGGGGCCTGGAGGCCCAGATACAGCACATCCACCCAGGTCCCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR TCA 90 bp ACACAGACTCAAGGCTCCTGGATTGAAAATGTGGAGGGCTTGGGCCAGGCGCGGCCACCGTCACTGGGCTaGACCCGTAGCGGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: TQTQGSWIENVEGLGQARPPSLG*TRSGLY
Trigger: GTACAGGCCGCTACGGGTTCAGCCCAGTGACGGTGG...CCGCGCCTGGCCCAAGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp AGCCTGTGGAGCCTCTGCTCGCTTCCTGCTCAGAAAGCCAGAAGAGAGCTGGGGGCTGATCCTGGGAGCTaGAGCAACCAGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: SLWSLCSLPAQKARRELGADPGS*SNQATC
Trigger: GCAGGTGGCCTGGTTGCTGCAGCTCCCAGGATCAGC...CCCCAGCTCTCTTCTGGCTTTCTGAGCAGGAAGCGAGCAGAGGCTCCACAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR GCA 90 bp GTCCCCAAACCCTCCCGTGTCCTGACGGCCCTAGAACTTGGAGGTGTCAGGACACAGCTTCTGGGCCTGTaGAGAGTCGGCCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: VPKPSRVLTALELGGVRTQLLGL*RVGHAW
Trigger: CCAGGCATGGCCGACTCTGCACAGGCCCAGAAGCTG...TGTCCTGACACCTCCAAGTTCTAGGGCCGTCAGGACACGGGAGGGTTTGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp AGAAAATGTGGAGGGCTCTACGACAAGGACAGCCATTCTGGCCCCAGAGCCCTGGGCTCCGGCCACAGCTaGTGCCACCTCATGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RKCGGLYDKDSHSGPRALGSGHS*CHLMGL
Trigger: CAGGCCCATGAGGTGGCAGCAGCTGTGGCCGGAGCC...CAGGGCTCTGGGGCCAGAATGGCTGTCCTTGTCGTAGAGCCCTCCACATTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp CAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTAACCGTGTTCCGGTCTaGACACAAGCCTCGATCACG +
Preference number: 4 (lower is better)
Translates to: QLSLPVQGVRARDLGGCANRVPV*TQASIT
Trigger: CGTGATCGAGGCTTGTGTGCAGACCGGAACACGGTT...AGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp AGCCTGTGGAGCCTCTGCTCGCTTCCTGCTCAGAAAGCCAGAAGAGAGCTGGGGCGGCCAGGGCCTTGCTaGAAGGATAGGGGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: SLWSLCSLPAQKARRELGRPGPC*KDRGAC
Trigger: ACAGGCACCCCTATCCTTGCAGCAAGGCCCTGGCCG...CCCCAGCTCTCTTCTGGCTTTCTGAGCAGGAAGCGAGCAGAGGCTCCACAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp GCTGAACCCGTAGCGGCCTGTACCCAGAGAATGGTACGGGTCCGGCTATCCTCCCTGGGGAAGAGACCTTaGCTCATCCAGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AEPVAACTQRMVRVRLSSLGKRP*LIQGLA
Trigger: AGCCAGCCCCTGGATGAGCCAAGGTCTCTTCCCCAG...GGAGGATAGCCGGACCCGTACCATTCTCTGGGTACAGGCCGCTACGGGTTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR CCA 90 bp GTGGAGCCTCTGCTCGCTTCCTGCTCAGAAAGCCAGAAGAGAGCTGGGGCAGGCTGGGTCACGTCCCCCTaGATGGCAGTCACCCTCACA +
Preference number: 4 (lower is better)
Translates to: VEPLLASCSESQKRAGAGWVTSP*MAVTLT
Trigger: TGTGAGGGTGACTGCCATCCAGGGGGACGTGACCCA...GCCTGCCCCAGCTCTCTTCTGGCTTTCTGAGCAGGAAGCGAGCAGAGGCTCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AGCCTGTGGAGCCTCTGCTCGCTTCCTGCTCAGAAAGCCAGAAGAGAGCTGGGGCAAGGACAGCCATTCTaGCCCCAGAGCCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SLWSLCSLPAQKARRELGQGQPF*PQSPAS
Trigger: GGAGGCAGGGCTCTGGGGCCAGAATGGCTGTCCTTG...CCCCAGCTCTCTTCTGGCTTTCTGAGCAGGAAGCGAGCAGAGGCTCCACAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp GTGGAGCCTCTGCTCGCTTCCTGCTCAGAAAGCCAGAAGAGAGCTGGGGCAGGCCACCGTAGATGCCCGTaGGACGAAGGGCACACGTCA +
Preference number: 4 (lower is better)
Translates to: VEPLLASCSESQKRAGAGHRRCP*DEGHTS
Trigger: TGACGTGTGCCCTTCGTCCCACGGGCATCTACGGTG...GCCTGCCCCAGCTCTCTTCTGGCTTTCTGAGCAGGAAGCGAGCAGAGGCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297679.10
CDS-3UTR TCA 90 bp ATGCAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGGTAGAAGTCCCTCATaGTCTGGTGGCCTTCACCGT +
Preference number: 4 (lower is better)
Translates to: MQLSLPVQGVRARDLGGCGRSPS*SGGLHR
Trigger: ACGGTGAAGGCCACCAGATCATGAGGGACTTCTACC...ACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297679.10
CDS-3UTR GCA 90 bp GAGAATGGTACGGGTCCGGCTATCCTCCCACGAGAACAGGGGCTCATAGCCGAAGTGCAGAGTCGGCCATaGCTGGCTGGGGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: ENGTGPAILPREQGLIAEVQSRP*LAGEET
Trigger: GGTCTCTTCCCCAGCCAGGCATGGCCGACTCTGCAC...TTCGGCTATGAGCCCCTGTTCTCGTGGGAGGATAGCCGGACCCGTACCATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR GCA 90 bp AAGAAAATGTGGAGGGCTCTACGACAAGGACAGCCATTCTGGCCCCAGAGCCCTAGCCGGGGCTCCCGCTaGAGCAGCATTCGCACCACG +
Preference number: 4 (lower is better)
Translates to: KKMWRALRQGQPFWPQSPSRGSR*SSIRTT
Trigger: CGTGGTGCGAATGCTGCTGCAGCGGGAGCCCCGGCT...AGGGCTCTGGGGCCAGAATGGCTGTCCTTGTCGTAGAGCCCTCCACATTTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp CCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTATCTGGACGTTCCGGGTACCCTaGACGTTGACCTCATGGATG +
Preference number: 4 (lower is better)
Translates to: PSRPGCEGSGPGWMCCIWTFRVP*TLTSWM
Trigger: CATCCATGAGGTCAACGTGCAGGGTACCCGGAACGT...CCAGATACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp GAGAATGGTACGGGTCCGGCTATCCTCCCACGAGAACAGGGGCTCATAGCCGAAACCAGCCCAGCCGTGTaGATGACCACATGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: ENGTGPAILPREQGLIAETSPAV*MTTWAP
Trigger: CGGAGCCCATGTGGTCATCCACACGGCTGGGCTGGT...TTCGGCTATGAGCCCCTGTTCTCGTGGGAGGATAGCCGGACCCGTACCATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR CCA 90 bp AACCAGAGCCGCCTCTGCACTCTGCACCGAGGGTCGCGTGTGGCTGTCAGGAGATGCACGTTGACCTCATaGATGGTCTTGGGACTGGCC +
Preference number: 4 (lower is better)
Translates to: NQSRLCTLHRGSRVAVRRCTLTS*MVLGLA
Trigger: GGCCAGTCCCAAGACCATCCATGAGGTCAACGTGCA...TCTCCTGACAGCCACACGCGACCCTCGGTGCAGAGTGCAGAGGCGGCTCTGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AACCAGAGCCGCCTCTGCACTCTGCACCGAGGGTCGCGTGTGGCTGTCAGGAGAAGCGGCCATCAGGACTaGGATGAGAGGACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: NQSRLCTLHRGSRVAVRRSGHQD*DERTEE
Trigger: TTCCTCTGTCCTCTCATCCCAGTCCTGATGGCCGCT...TCTCCTGACAGCCACACGCGACCCTCGGTGCAGAGTGCAGAGGCGGCTCTGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp AGAAAATGTGGAGGGCTCTACGACAAGGACAGCCATTCTGGCCCCAGAGCCCTGCATCCAGGGGCTGGCTaGCACCTGCTGCAACCACCT +
Preference number: 4 (lower is better)
Translates to: RKCGGLYDKDSHSGPRALHPGAG*HLLQPP
Trigger: AGGTGGTTGCAGCAGGTGGCAGCCAGCCCCTGGATG...CAGGGCTCTGGGGCCAGAATGGCTGTCCTTGTCGTAGAGCCCTCCACATTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR GCA 90 bp CCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTATCTGGCCACAACTTCCATGCTaGTGGTGTAGACCAGGAACC +
Preference number: 4 (lower is better)
Translates to: PSRPGCEGSGPGWMCCIWPQLPC*WCRPGT
Trigger: GGTTCCTGGTCTACACCAGCAGCATGGAAGTTGTGG...CCAGATACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp CACCAGGGCACCAGACACTCACCAAGCGGCCATCAGGACTGGGATGAGAGGACAGCATCCAGGCAACATTaGCTTCCTCCCGTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: HQGTRHSPSGHQDWDERTASRQH*LPPVGL
Trigger: GAGGCCAACGGGAGGAAGGCAATGTTGCCTGGATGC...TGTCCTCTCATCCCAGTCCTGATGGCCGCTTGGTGAGTGTCTGGTGCCCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR GCA 90 bp GTACCCAGAGAATGGTACGGGTCCGGCTATCCTCCCACGAGAACAGGGGCTCATCGGGCTGCCAGCACGTaGATCCAGGCAACATTGCCT +
Preference number: 4 (lower is better)
Translates to: VPREWYGSGYPPTRTGAHRAAST*IQATLP
Trigger: AGGCAATGTTGCCTGGATGCACGTGCTGGCAGCCCG...ATGAGCCCCTGTTCTCGTGGGAGGATAGCCGGACCCGTACCATTCTCTGGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR GCA 90 bp ATGCAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTCCTCTGCTCGCTTCCTaGTCAGAAAGCCAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: MQLSLPVQGVRARDLGGCPLLAS*SESQKR
Trigger: TCTCTTCTGGCTTTCTGAGCAGGAAGCGAGCAGAGG...ACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AACCAGAGCCGCCTCTGCACTCTGCACCGAGGGTCGCGTGTGGCTGTCAGGAGACAACTTCCATGCTGCTaGTGTAGACCAGGAACCGTG +
Preference number: 4 (lower is better)
Translates to: NQSRLCTLHRGSRVAVRRQLPCC*CRPGTV
Trigger: CACGGTTCCTGGTCTACACCAGCAGCATGGAAGTTG...TCTCCTGACAGCCACACGCGACCCTCGGTGCAGAGTGCAGAGGCGGCTCTGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp GGTGTCAGGACACAACACAGACTCAAGGCTCCTGGATTGAAAATGTGGAGGGCTCCAGTAGGGCAGCAATaGGCGGGCGCCCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: GVRTQHRLKAPGLKMWRAPVGQQ*AGAHQP
Trigger: CGGCTGGTGGGCGCCCGCCCATTGCTGCCCTACTGG...AGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGTTGTGTCCTGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AACCAGAGCCGCCTCTGCACTCTGCACCGAGGGTCGCGTGTGGCTGTCAGGAGAGACGGCCCTAGAACTTaGAGGTGTCAGGACACAACA +
Preference number: 4 (lower is better)
Translates to: NQSRLCTLHRGSRVAVRRDGPRT*RCQDTT
Trigger: TGTTGTGTCCTGACACCTCCAAGTTCTAGGGCCGTC...TCTCCTGACAGCCACACGCGACCCTCGGTGCAGAGTGCAGAGGCGGCTCTGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AATGCAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGGACGGCCCTAGAACTTaGAGGTGTCAGGACACAACA +
Preference number: 4 (lower is better)
Translates to: NAAVPSRPGCEGSGPGWMDGPRT*RCQDTT
Trigger: TGTTGTGTCCTGACACCTCCAAGTTCTAGGGCCGTC...CATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTGCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
3UTR CAA 72 bp GGTGTCAGGACACAACACAGACTCAAGGCTCCTGGATaGAAAATGTGGAGGGCTTGGGCCAGGCGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: GVRTQHRLKAPG*KMWRAWARRGG
Trigger: GCCACCGCGCCTGGCCCAAGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGTTGTGTCCTGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR TCA 90 bp ACACAGACTCAAGGCTCCTGGATTGAAAATGTGGAGGGCTTGGGCCAGGCGCGGGGGTACCCTGCACGTTaGCCTCATGGATGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: TQTQGSWIENVEGLGQARGYPAR*PHGWSW
Trigger: CCAAGACCATCCATGAGGTCAACGTGCAGGGTACCC...CCGCGCCTGGCCCAAGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR TCA 90 bp GCCACCAGGGCACCAGACACTCACCAAGCGGCCATCAGGACTGGGATGAGAGGATCAAGGCTCCTGGATTaGAAATGTGGAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: ATRAPDTHQAAIRTGMRGSRLLD*KCGGLG
Trigger: CCCAAGCCCTCCACATTTTCAATCCAGGAGCCTTGA...TCCTCTCATCCCAGTCCTGATGGCCGCTTGGTGAGTGTCTGGTGCCCTGGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp GTACCCAGAGAATGGTACGGGTCCGGCTATCCTCCCACGAGAACAGGGGCTCATCTGGCTGCCACCTGCTaGAACCACCTGTTACTGCTG +
Preference number: 4 (lower is better)
Translates to: VPREWYGSGYPPTRTGAHLAATC*NHLLLL
Trigger: CAGCAGTAACAGGTGGTTGCAGCAGGTGGCAGCCAG...ATGAGCCCCTGTTCTCGTGGGAGGATAGCCGGACCCGTACCATTCTCTGGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR GCA 90 bp GTACCCAGAGAATGGTACGGGTCCGGCTATCCTCCCACGAGAACAGGGGCTCATTCTTGGGACTGGCCCTaGCAAACACGTCTACCAGCC +
Preference number: 4 (lower is better)
Translates to: VPREWYGSGYPPTRTGAHSWDWP*QTRLPA
Trigger: GGCTGGTAGACGTGTTTGGCAGGGCCAGTCCCAAGA...ATGAGCCCCTGTTCTCGTGGGAGGATAGCCGGACCCGTACCATTCTCTGGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR CCA 90 bp GGTGTCAGGACACAACACAGACTCAAGGCTCCTGGATTGAAAATGTGGAGGGCTTCTTTCGTCCAGGGCTaGCCGGCCCGCACACCGTCC +
Preference number: 4 (lower is better)
Translates to: GVRTQHRLKAPGLKMWRASFVQG*PARTPS
Trigger: GGACGGTGTGCGGGCCGGCCAGCCCTGGACGAAAGA...AGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGTTGTGTCCTGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AAGAAAATGTGGAGGGCTCTACGACAAGGACAGCCATTCTGGCCCCAGAGCCCTTCACGTCCCCCTGGATaGCAGTCACCCTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: KKMWRALRQGQPFWPQSPSRPPG*QSPSQA
Trigger: GGCCTGTGAGGGTGACTGCCATCCAGGGGGACGTGA...AGGGCTCTGGGGCCAGAATGGCTGTCCTTGTCGTAGAGCCCTCCACATTTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp CACCAGGGCACCAGACACTCACCAAGCGGCCATCAGGACTGGGATGAGAGGACAGTGCACTGCTTCGTATaGGGTGTCTTCGTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: HQGTRHSPSGHQDWDERTVHCFV*GVFVAP
Trigger: AGGGGCAACGAAGACACCCCATACGAAGCAGTGCAC...TGTCCTCTCATCCCAGTCCTGATGGCCGCTTGGTGAGTGTCTGGTGCCCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AAGAAAATGTGGAGGGCTCTACGACAAGGACAGCCATTCTGGCCCCAGAGCCCTTGCGTAGAGCACCAGTaGCCGCAGCAGCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: KKMWRALRQGQPFWPQSPCVEHQ*PQQPLQ
Trigger: CTGCAGTGGCTGCTGCGGCCACTGGTGCTCTACGCA...AGGGCTCTGGGGCCAGAATGGCTGTCCTTGTCGTAGAGCCCTCCACATTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp GTCCCCAAACCCTCCCGTGTCCTGACGGCCCTAGAACTTGGAGGTGTCAGGACACCTGTACCCAGAGAATaGTACGGGTCCGGCTATCCT +
Preference number: 4 (lower is better)
Translates to: VPKPSRVLTALELGGVRTPVPRE*YGSGYP
Trigger: AGGATAGCCGGACCCGTACCATTCTCTGGGTACAGG...TGTCCTGACACCTCCAAGTTCTAGGGCCGTCAGGACACGGGAGGGTTTGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp GTACCCAGAGAATGGTACGGGTCCGGCTATCCTCCCACGAGAACAGGGGCTCATCCTGGATTGAAAATGTaGAGGGCTTGGGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: VPREWYGSGYPPTRTGAHPGLKM*RAWARR
Trigger: GCGCCTGGCCCAAGCCCTCCACATTTTCAATCCAGG...ATGAGCCCCTGTTCTCGTGGGAGGATAGCCGGACCCGTACCATTCTCTGGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR CCA 90 bp CACCAGGGCACCAGACACTCACCAAGCGGCCATCAGGACTGGGATGAGAGGACAAGCGGCCATCAGGACTaGGATGAGAGGACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: HQGTRHSPSGHQDWDERTSGHQD*DERTEE
Trigger: TTCCTCTGTCCTCTCATCCCAGTCCTGATGGCCGCT...TGTCCTCTCATCCCAGTCCTGATGGCCGCTTGGTGAGTGTCTGGTGCCCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AGAAAATGTGGAGGGCTCTACGACAAGGACAGCCATTCTGGCCCCAGAGCCCTGAGCCAGGTACAGCATTaGGGACATCCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RKCGGLYDKDSHSGPRALSQVQH*GHPQAQ
Trigger: CTGGGCCTGGGGATGTCCCCAATGCTGTACCTGGCT...CAGGGCTCTGGGGCCAGAATGGCTGTCCTTGTCGTAGAGCCCTCCACATTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR TCA 90 bp AAAACAATGGGAACATCACCTCCCAAAGAGGGACTGAGGTGGCTGGAGGAACCAGCCCCTGCTGATGGCTaGGTTACGGAGAGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: KTMGTSPPKEGLRWLEEPAPADG*VTERGA
Trigger: CGCCCCTCTCTCCGTAACTCAGCCATCAGCAGGGGC...TGGTTCCTCCAGCCACCTCAGTCCCTCTTTGGGAGGTGATGTTCCCATTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR TCA 90 bp AAAACAATGGGAACATCACCTCCCAAAGAGGGACTGAGGTGGCTGGAGGAACCACGGGGAGGGCAGAGCTaGTCCTGGGAGCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: KTMGTSPPKEGLRWLEEPRGGQS*SWELQQ
Trigger: TTGCTGCAGCTCCCAGGATCAGCTCTGCCCTCCCCG...TGGTTCCTCCAGCCACCTCAGTCCCTCTTTGGGAGGTGATGTTCCCATTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR TCA 90 bp GCCACCAGGGCACCAGACACTCACCAAGCGGCCATCAGGACTGGGATGAGAGGACCAGGAACTCCATGTTaGAATCCTCGTAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ATRAPDTHQAAIRTGMRGPGTPC*NPRSSC
Trigger: ACAGGAGCTACGAGGATTTCAACATGGAGTTCCTGG...TCCTCTCATCCCAGTCCTGATGGCCGCTTGGTGAGTGTCTGGTGCCCTGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp GGTGTCAGGACACAACACAGACTCAAGGCTCCTGGATTGAAAATGTGGAGGGCTTCCGGCCACAGCTGCTaGCACCTCATGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GVRTQHRLKAPGLKMWRASGHSC*HLMGLG
Trigger: ACCCAGGCCCATGAGGTGGCAGCAGCTGTGGCCGGA...AGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGTTGTGTCCTGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp GAGAATGGTACGGGTCCGGCTATCCTCCCACGAGAACAGGGGCTCATAGCCGAAAACCGTGTTCCGGTCTaGACACAAGCCTCGATCACG +
Preference number: 4 (lower is better)
Translates to: ENGTGPAILPREQGLIAENRVPV*TQASIT
Trigger: CGTGATCGAGGCTTGTGTGCAGACCGGAACACGGTT...TTCGGCTATGAGCCCCTGTTCTCGTGGGAGGATAGCCGGACCCGTACCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR GCA 90 bp GTACCCAGAGAATGGTACGGGTCCGGCTATCCTCCCACGAGAACAGGGGCTCATAGCCTGTGGAGCCTCTaGTCGCTTCCTGCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: VPREWYGSGYPPTRTGAHSLWSL*SLPAQK
Trigger: TTTCTGAGCAGGAAGCGAGCAGAGGCTCCACAGGCT...ATGAGCCCCTGTTCTCGTGGGAGGATAGCCGGACCCGTACCATTCTCTGGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR GCA 90 bp ACACAGACTCAAGGCTCCTGGATTGAAAATGTGGAGGGCTTGGGCCAGGCGCGGAGCCTGTGGAGCCTCTaGTCGCTTCCTGCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: TQTQGSWIENVEGLGQARSLWSL*SLPAQK
Trigger: TTTCTGAGCAGGAAGCGAGCAGAGGCTCCACAGGCT...CCGCGCCTGGCCCAAGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp AAAACAATGGGAACATCACCTCCCAAAGAGGGACTGAGGTGGCTGGAGGAACCATCGGCCATGCCTGGCTaGAGCCGCTATCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: KTMGTSPPKEGLRWLEEPSAMPG*SRYPRV
Trigger: CACCCTGGGATAGCGGCTGCAGCCAGGCATGGCCGA...TGGTTCCTCCAGCCACCTCAGTCCCTCTTTGGGAGGTGATGTTCCCATTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297679.10
CDS-3UTR GCA 90 bp GCGGTGGCTCACACTTGTAGTTCCAGCGTTTTGGGAGGCCCACGTGGGAAGATCGCATCCAGGCAACATTaGCCACATAGACCCGGCCAT +
Preference number: 4 (lower is better)
Translates to: AVAHTCSSSVLGGPRGKIASRQH*PHRPGH
Trigger: ATGGCCGGGTCTATGTGGGCAATGTTGCCTGGATGC...GATCTTCCCACGTGGGCCTCCCAAAACGCTGGAACTACAAGTGTGAGCCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297679.10
CDS-3UTR CCA 90 bp GGCTATCCTCCCACGAGAACAGGGGCTCATAGCCGAAATGGCGCTGAGCCTTGTCCTCATGGATGGTCTTaGGACTGGCCCTGCCAAACA +
Preference number: 4 (lower is better)
Translates to: GYPPTRTGAHSRNGAEPCPHGWS*DWPCQT
Trigger: TGTTTGGCAGGGCCAGTCCCAAGACCATCCATGAGG...ACAAGGCTCAGCGCCATTTCGGCTATGAGCCCCTGTTCTCGTGGGAGGATAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR CCA 90 bp AAAACAATGGGAACATCACCTCCCAAAGAGGGACTGAGGTGGCTGGAGGAACCACCCCAGGCCCAGGGCTaGCGATGTGCTGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: KTMGTSPPKEGLRWLEEPPQAQG*RCAGKE
Trigger: TTCCTTCCCAGCACATCGCCAGCCCTGGGCCTGGGG...TGGTTCCTCCAGCCACCTCAGTCCCTCTTTGGGAGGTGATGTTCCCATTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp GGTGTCAGGACACAACACAGACTCAAGGCTCCTGGATTGAAAATGTGGAGGGCTGACGAGGCTGGCGTTTaGGGGGAGGGCAGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: GVRTQHRLKAPGLKMWRADEAGV*GEGRAD
Trigger: ATCAGCTCTGCCCTCCCCGCAAACGCCAGCCTCGTC...AGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGTTGTGTCCTGACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR GCA 90 bp GGTGTCAGGACACAACACAGACTCAAGGCTCCTGGATTGAAAATGTGGAGGGCTCAGCTTCTGGGCCTGTaGAGAGTCGGCCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: GVRTQHRLKAPGLKMWRAQLLGL*RVGHAW
Trigger: CCAGGCATGGCCGACTCTGCACAGGCCCAGAAGCTG...AGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGTTGTGTCCTGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp GAGAATGGTACGGGTCCGGCTATCCTCCCACGAGAACAGGGGCTCATAGCCGAACCACAACTTCCATGCTaGTGGTGTAGACCAGGAACC +
Preference number: 4 (lower is better)
Translates to: ENGTGPAILPREQGLIAEPQLPC*WCRPGT
Trigger: GGTTCCTGGTCTACACCAGCAGCATGGAAGTTGTGG...TTCGGCTATGAGCCCCTGTTCTCGTGGGAGGATAGCCGGACCCGTACCATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR GCA 90 bp GGTGTCAGGACACAACACAGACTCAAGGCTCCTGGATTGAAAATGTGGAGGGCTCGGCCAGGGCCTTGCTaGAAGGATAGGGGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: GVRTQHRLKAPGLKMWRARPGPC*KDRGAC
Trigger: ACAGGCACCCCTATCCTTGCAGCAAGGCCCTGGCCG...AGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGTTGTGTCCTGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp AAAACAATGGGAACATCACCTCCCAAAGAGGGACTGAGGTGGCTGGAGGAACCAACTCGGCCAGGGCCTTaGTGCAAGGATAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: KTMGTSPPKEGLRWLEEPTRPGP*CKDRGA
Trigger: GGCACCCCTATCCTTGCAGCAAGGCCCTGGCCGAGT...TGGTTCCTCCAGCCACCTCAGTCCCTCTTTGGGAGGTGATGTTCCCATTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp AAAACAATGGGAACATCACCTCCCAAAGAGGGACTGAGGTGGCTGGAGGAACCAGTGCAGAGTCGGCCATaGCTGGCTGCAGCCGCTATC +
Preference number: 4 (lower is better)
Translates to: KTMGTSPPKEGLRWLEEPVQSRP*LAAAAI
Trigger: GATAGCGGCTGCAGCCAGGCATGGCCGACTCTGCAC...TGGTTCCTCCAGCCACCTCAGTCCCTCTTTGGGAGGTGATGTTCCCATTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297679.10
CDS-3UTR GCA 90 bp AAAACAATGGGAACATCACCTCCCAAAGAGGGACTGAGGTGGCTGGAGGAACCAGGCCTTCACCGTAGATaGCCGTGGGACGAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: KTMGTSPPKEGLRWLEEPGLHRR*PWDEGH
Trigger: GTGCCCTTCGTCCCACGGGCATCTACGGTGAAGGCC...TGGTTCCTCCAGCCACCTCAGTCCCTCTTTGGGAGGTGATGTTCCCATTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297679.10
CDS-3UTR CCA 90 bp AGCCTGTGGAGCCTCTGCTCGCTTCCTGCTCAGAAAGCCAGAAGAGAGCTGGGGCAGACTCAAGGCTCCTaGATTGAAAATGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SLWSLCSLPAQKARRELGQTQGS*IENVEG
Trigger: GCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTG...CCCCAGCTCTCTTCTGGCTTTCTGAGCAGGAAGCGAGCAGAGGCTCCACAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp GGTGTCAGGACACAACACAGACTCAAGGCTCCTGGATTGAAAATGTGGAGGGCTACCGAGGGTCGCGTGTaGCTGTCAGGAGAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: GVRTQHRLKAPGLKMWRATEGRV*LSGEQR
Trigger: ACGCTGCTCTCCTGACAGCCACACGCGACCCTCGGT...AGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGTTGTGTCCTGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp GGTGTCAGGACACAACACAGACTCAAGGCTCCTGGATTGAAAATGTGGAGGGCTAGAGTCGGCCATGCCTaGCTGCAGCCGCTATCCCAG +
Preference number: 4 (lower is better)
Translates to: GVRTQHRLKAPGLKMWRARVGHA*LQPLSQ
Trigger: CTGGGATAGCGGCTGCAGCCAGGCATGGCCGACTCT...AGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGTTGTGTCCTGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297679.10
CDS-3UTR GCA 90 bp AAAACAATGGGAACATCACCTCCCAAAGAGGGACTGAGGTGGCTGGAGGAACCAGCAACCACCTGTTACTaGTGGAGGTGCCCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: KTMGTSPPKEGLRWLEEPATTCY*WRCPGA
Trigger: CGCTCCAGGGCACCTCCAGCAGTAACAGGTGGTTGC...TGGTTCCTCCAGCCACCTCAGTCCCTCTTTGGGAGGTGATGTTCCCATTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR CCA 90 bp GGTGTCAGGACACAACACAGACTCAAGGCTCCTGGATTGAAAATGTGGAGGGCTCAGGGACCCAGGTGTTaGTCAAAGACCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GVRTQHRLKAPGLKMWRAQGPRC*SKTRSS
Trigger: GGAGCTGCGGGTCTTTGACCAACACCTGGGTCCCTG...AGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGTTGTGTCCTGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AAAACAATGGGAACATCACCTCCCAAAGAGGGACTGAGGTGGCTGGAGGAACCAGTGTGGATGACCACATaGGCTCCGGCCACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KTMGTSPPKEGLRWLEEPVWMTT*APATAA
Trigger: AGCAGCTGTGGCCGGAGCCCATGTGGTCATCCACAC...TGGTTCCTCCAGCCACCTCAGTCCCTCTTTGGGAGGTGATGTTCCCATTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AGAAAATGTGGAGGGCTCTACGACAAGGACAGCCATTCTGGCCCCAGAGCCCTGCAACTTCCATGCTGCTaGTGTAGACCAGGAACCGTG +
Preference number: 4 (lower is better)
Translates to: RKCGGLYDKDSHSGPRALQLPCC*CRPGTV
Trigger: CACGGTTCCTGGTCTACACCAGCAGCATGGAAGTTG...CAGGGCTCTGGGGCCAGAATGGCTGTCCTTGTCGTAGAGCCCTCCACATTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AAAACAATGGGAACATCACCTCCCAAAGAGGGACTGAGGTGGCTGGAGGAACCAAGCCAGGTACAGCATTaGGGACATCCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: KTMGTSPPKEGLRWLEEPSQVQH*GHPQAQ
Trigger: CTGGGCCTGGGGATGTCCCCAATGCTGTACCTGGCT...TGGTTCCTCCAGCCACCTCAGTCCCTCTTTGGGAGGTGATGTTCCCATTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp CAGAGGGGAATTCTAAGACAGACAGTTGAAGGTGAGGCCTTTGAAAAACAATGGCTCCAGCTCCCGGGCTaGCAGCACGTGCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: QRGILRQTVEGEAFEKQWLQLPG*QHVHPG
Trigger: GCCTGGATGCACGTGCTGGCAGCCCGGGAGCTGGAG...CCATTGTTTTTCAAAGGCCTCACCTTCAACTGTCTGTCTTAGAATTCCCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp AAGAAAATGTGGAGGGCTCTACGACAAGGACAGCCATTCTGGCCCCAGAGCCCTCCTCTGCTCGCTTCCTaGTCAGAAAGCCAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: KKMWRALRQGQPFWPQSPPLLAS*SESQKR
Trigger: TCTCTTCTGGCTTTCTGAGCAGGAAGCGAGCAGAGG...AGGGCTCTGGGGCCAGAATGGCTGTCCTTGTCGTAGAGCCCTCCACATTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AGGGGAATTCTAAGACAGACAGTTGAAGGTGAGGCCTTTGAAAAACAATGGGAACCAGTAGGGCAGCAATaGGCGGGCGCCCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: RGILRQTVEGEAFEKQWEPVGQQ*AGAHQP
Trigger: CGGCTGGTGGGCGCCCGCCCATTGCTGCCCTACTGG...TTCCCATTGTTTTTCAAAGGCCTCACCTTCAACTGTCTGTCTTAGAATTCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp CAGAGGGGAATTCTAAGACAGACAGTTGAAGGTGAGGCCTTTGAAAAACAATGGCAGCCCCACCGTCACTaGGCTGAACCCGTAGCGGCC +
Preference number: 4 (lower is better)
Translates to: QRGILRQTVEGEAFEKQWQPHRH*AEPVAA
Trigger: GGCCGCTACGGGTTCAGCCCAGTGACGGTGGGGCTG...CCATTGTTTTTCAAAGGCCTCACCTTCAACTGTCTGTCTTAGAATTCCCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp AGGGGAATTCTAAGACAGACAGTTGAAGGTGAGGCCTTTGAAAAACAATGGGAAGGCTCCGGCCACAGCTaGTGCCACCTCATGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RGILRQTVEGEAFEKQWEGSGHS*CHLMGL
Trigger: CAGGCCCATGAGGTGGCAGCAGCTGTGGCCGGAGCC...TTCCCATTGTTTTTCAAAGGCCTCACCTTCAACTGTCTGTCTTAGAATTCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp AAAACAATGGGAACATCACCTCCCAAAGAGGGACTGAGGTGGCTGGAGGAACCAGCCCCACAACTTCCATaGTGCTGGTGTAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: KTMGTSPPKEGLRWLEEPAPQLP*CWCRPG
Trigger: TCCTGGTCTACACCAGCAGCATGGAAGTTGTGGGGC...TGGTTCCTCCAGCCACCTCAGTCCCTCTTTGGGAGGTGATGTTCCCATTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AAAACAATGGGAACATCACCTCCCAAAGAGGGACTGAGGTGGCTGGAGGAACCACCTCATGGATGGTCTTaGGACTGGCCCTGCCAAACA +
Preference number: 4 (lower is better)
Translates to: KTMGTSPPKEGLRWLEEPPHGWS*DWPCQT
Trigger: TGTTTGGCAGGGCCAGTCCCAAGACCATCCATGAGG...TGGTTCCTCCAGCCACCTCAGTCCCTCTTTGGGAGGTGATGTTCCCATTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AAAACAATGGGAACATCACCTCCCAAAGAGGGACTGAGGTGGCTGGAGGAACCATGCACGTTGACCTCATaGATGGTCTTGGGACTGGCC +
Preference number: 4 (lower is better)
Translates to: KTMGTSPPKEGLRWLEEPCTLTS*MVLGLA
Trigger: GGCCAGTCCCAAGACCATCCATGAGGTCAACGTGCA...TGGTTCCTCCAGCCACCTCAGTCCCTCTTTGGGAGGTGATGTTCCCATTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AAAACAATGGGAACATCACCTCCCAAAGAGGGACTGAGGTGGCTGGAGGAACCAGTGCACTGCTTCGTATaGGGTGTCTTCGTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: KTMGTSPPKEGLRWLEEPVHCFV*GVFVAP
Trigger: AGGGGCAACGAAGACACCCCATACGAAGCAGTGCAC...TGGTTCCTCCAGCCACCTCAGTCCCTCTTTGGGAGGTGATGTTCCCATTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp GGTGTCAGGACACAACACAGACTCAAGGCTCCTGGATTGAAAATGTGGAGGGCTCCTGTACCCAGAGAATaGTACGGGTCCGGCTATCCT +
Preference number: 4 (lower is better)
Translates to: GVRTQHRLKAPGLKMWRAPVPRE*YGSGYP
Trigger: AGGATAGCCGGACCCGTACCATTCTCTGGGTACAGG...AGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGTTGTGTCCTGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AAGAAAATGTGGAGGGCTCTACGACAAGGACAGCCATTCTGGCCCCAGAGCCCTCAGACTCAAGGCTCCTaGATTGAAAATGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: KKMWRALRQGQPFWPQSPQTQGS*IENVEG
Trigger: GCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTG...AGGGCTCTGGGGCCAGAATGGCTGTCCTTGTCGTAGAGCCCTCCACATTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp CAGAGGGGAATTCTAAGACAGACAGTTGAAGGTGAGGCCTTTGAAAAACAATGGACTCGGCCAGGGCCTTaGTGCAAGGATAGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: QRGILRQTVEGEAFEKQWTRPGP*CKDRGA
Trigger: GGCACCCCTATCCTTGCAGCAAGGCCCTGGCCGAGT...CCATTGTTTTTCAAAGGCCTCACCTTCAACTGTCTGTCTTAGAATTCCCCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp CAGAGGGGAATTCTAAGACAGACAGTTGAAGGTGAGGCCTTTGAAAAACAATGGACCGAGGGTCGCGTGTaGCTGTCAGGAGAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: QRGILRQTVEGEAFEKQWTEGRV*LSGEQR
Trigger: ACGCTGCTCTCCTGACAGCCACACGCGACCCTCGGT...CCATTGTTTTTCAAAGGCCTCACCTTCAACTGTCTGTCTTAGAATTCCCCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp CAGAGGGGAATTCTAAGACAGACAGTTGAAGGTGAGGCCTTTGAAAAACAATGGAGGTACACCAGCTTCTaGGCCTGTGCAGAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: QRGILRQTVEGEAFEKQWRYTSF*ACAESA
Trigger: GGCCGACTCTGCACAGGCCCAGAAGCTGGTGTACCT...CCATTGTTTTTCAAAGGCCTCACCTTCAACTGTCTGTCTTAGAATTCCCCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp GTACCCAGAGAATGGTACGGGTCCGGCTATCCTCCCACGAGAACAGGGGCTCATAAGAAAAAGAAAATGTaGAGGGCTCTACGACAAGGA +
Preference number: 4 (lower is better)
Translates to: VPREWYGSGYPPTRTGAHKKKKM*RALRQG
Trigger: TCCTTGTCGTAGAGCCCTCCACATTTTCTTTTTCTT...ATGAGCCCCTGTTCTCGTGGGAGGATAGCCGGACCCGTACCATTCTCTGGGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR CCA 90 bp AGGGGAATTCTAAGACAGACAGTTGAAGGTGAGGCCTTTGAAAAACAATGGGAAGGACCTTCCTCCCGTTaGCCTCCAGGACCAGCCACT +
Preference number: 4 (lower is better)
Translates to: RGILRQTVEGEAFEKQWEGPSSR*PPGPAT
Trigger: AGTGGCTGGTCCTGGAGGCCAACGGGAGGAAGGTCC...TTCCCATTGTTTTTCAAAGGCCTCACCTTCAACTGTCTGTCTTAGAATTCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297679.10
CDS-3UTR GCA 90 bp CAGAGGGGAATTCTAAGACAGACAGTTGAAGGTGAGGCCTTTGAAAAACAATGGAGCATTCGCACCACGTaGTCTCCCAGGAAGCCACAG +
Preference number: 4 (lower is better)
Translates to: QRGILRQTVEGEAFEKQWSIRTT*SPRKPQ
Trigger: CTGTGGCTTCCTGGGAGAGCACGTGGTGCGAATGCT...CCATTGTTTTTCAAAGGCCTCACCTTCAACTGTCTGTCTTAGAATTCCCCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp CAGAGGGGAATTCTAAGACAGACAGTTGAAGGTGAGGCCTTTGAAAAACAATGGGGGGTGCCTGTGCACTaGTTCGTATGGGGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: QRGILRQTVEGEAFEKQWGVPVH*FVWGVF
Trigger: GAAGACACCCCATACGAAGCAGTGCACAGGCACCCC...CCATTGTTTTTCAAAGGCCTCACCTTCAACTGTCTGTCTTAGAATTCCCCTCTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp AGGGGAATTCTAAGACAGACAGTTGAAGGTGAGGCCTTTGAAAAACAATGGGAATCTTGGGACTGGCCCTaGCAAACACGTCTACCAGCC +
Preference number: 4 (lower is better)
Translates to: RGILRQTVEGEAFEKQWESWDWP*QTRLPA
Trigger: GGCTGGTAGACGTGTTTGGCAGGGCCAGTCCCAAGA...TTCCCATTGTTTTTCAAAGGCCTCACCTTCAACTGTCTGTCTTAGAATTCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CCA 90 bp AAGAAAATGTGGAGGGCTCTACGACAAGGACAGCCATTCTGGCCCCAGAGCCCTAAGAAAAAGAAAATGTaGAGGGCTCTACGACAAGGA +
Preference number: 4 (lower is better)
Translates to: KKMWRALRQGQPFWPQSPKKKKM*RALRQG
Trigger: TCCTTGTCGTAGAGCCCTCCACATTTTCTTTTTCTT...AGGGCTCTGGGGCCAGAATGGCTGTCCTTGTCGTAGAGCCCTCCACATTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR TCA 90 bp CAGAGGGGAATTCTAAGACAGACAGTTGAAGGTGAGGCCTTTGAAAAACAATGGTCAAGGCTCCTGGATTaGAAATGTGGAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: QRGILRQTVEGEAFEKQWSRLLD*KCGGLG
Trigger: CCCAAGCCCTCCACATTTTCAATCCAGGAGCCTTGA...CCATTGTTTTTCAAAGGCCTCACCTTCAACTGTCTGTCTTAGAATTCCCCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR GCA 90 bp AGGGGAATTCTAAGACAGACAGTTGAAGGTGAGGCCTTTGAAAAACAATGGGAAACGTTCCGGGTACCCTaGACGTTGACCTCATGGATG +
Preference number: 4 (lower is better)
Translates to: RGILRQTVEGEAFEKQWETFRVP*TLTSWM
Trigger: CATCCATGAGGTCAACGTGCAGGGTACCCGGAACGT...TTCCCATTGTTTTTCAAAGGCCTCACCTTCAACTGTCTGTCTTAGAATTCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR TCA 90 bp CAGAGGGGAATTCTAAGACAGACAGTTGAAGGTGAGGCCTTTGAAAAACAATGGGTAGCTCCTGTAGGGTaGTCCATCGTAGCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: QRGILRQTVEGEAFEKQWVAPVG*SIVAEV
Trigger: TACTTCTGCTACGATGGATCACCCTACAGGAGCTAC...CCATTGTTTTTCAAAGGCCTCACCTTCAACTGTCTGTCTTAGAATTCCCCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR TCA 90 bp CAGAGGGGAATTCTAAGACAGACAGTTGAAGGTGAGGCCTTTGAAAAACAATGGCCAGGAACTCCATGTTaGAATCCTCGTAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QRGILRQTVEGEAFEKQWPGTPC*NPRSSC
Trigger: ACAGGAGCTACGAGGATTTCAACATGGAGTTCCTGG...CCATTGTTTTTCAAAGGCCTCACCTTCAACTGTCTGTCTTAGAATTCCCCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS CCA 90 bp CGGAGAGAGGGGCGGGCTGCAGCCGCTATCCCAGGGTGCCCAGACTaGCCTGGAGGGGCCCTCTTCTTTCGTCCAGGGCTGGCCGGCCCG +
Preference number: 5 (lower is better)
Translates to: RREGRAAAAIPGCPD*PGGALFFRPGLAGP
Trigger: CGGGCCGGCCAGCCCTGGACGAAAGAAGAGGGCCCCTCCAGGCCAGTCTGGGCACCCTGGGATAGCGGCTGCAGCCCGCCCCTCTCTCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS TCA 90 bp GAGCTGCAGCAACCAGGCCACCTGCCGTCTGCCCCTGCTGATGGCTaGGTTACGGAGAGAGGGGCGGGCTGCAGCCGCTATCCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: ELQQPGHLPSAPADG*VTERGAGCSRYPRV
Trigger: CACCCTGGGATAGCGGCTGCAGCCCGCCCCTCTCTCCGTAACTCAGCCATCAGCAGGGGCAGACGGCAGGTGGCCTGGTTGCTGCAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS GCA 90 bp GACGAGGCTGGCGTTTGCGGGGAGGGCAGAGCTGATCCTGGGAGCTaGAGCAACCAGGCCACCTGCCGTCTGCCCCTGCTGATGGCTGAG +
Preference number: 5 (lower is better)
Translates to: DEAGVCGEGRADPGS*SNQATCRLPLLMAE
Trigger: CTCAGCCATCAGCAGGGGCAGACGGCAGGTGGCCTGGTTGCTGCAGCTCCCAGGATCAGCTCTGCCCTCCCCGCAAACGCCAGCCTCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS GCA 90 bp AGGGGCTGGCTGCCACCTGCTGCAACCACCTGTTACTGCTGGAGGTaGCCTGGAGCGGTGACGAGGCTGGCGTTTGCGGGGAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: RGWLPPAATTCYCWR*PGAVTRLAFAGRAE
Trigger: CTCTGCCCTCCCCGCAAACGCCAGCCTCGTCACCGCTCCAGGGCACCTCCAGCAGTAACAGGTGGTTGCAGCAGGTGGCAGCCAGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000574447.1
CDS GCA 90 bp GGCTCATCCAGGGGCTGGCTGCCACCTGCTGCAACCACCTGTTACTaGTGGAGGTGCCCTGGAGCGGTGACGAGGCTGGCGTTTGCGGGG +
Preference number: 5 (lower is better)
Translates to: GSSRGWLPPAATTCY*WRCPGAVTRLAFAG
Trigger: CCCCGCAAACGCCAGCCTCGTCACCGCTCCAGGGCACCTCCAGCAGTAACAGGTGGTTGCAGCAGGTGGCAGCCAGCCCCTGGATGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000574447.1
CDS GCA 90 bp AGGTGTTGGTCAAAGACCCGCAGCTCCCCGAGCCGGGGCTCCCGCTaGAGCAGCATTCGCACCACGTGCTCTCCCAGGAAGCCACAGCCC +
Preference number: 5 (lower is better)
Translates to: RCWSKTRSSPSRGSR*SSIRTTCSPRKPQP
Trigger: GGGCTGTGGCTTCCTGGGAGAGCACGTGGTGCGAATGCTGCTGCAGCGGGAGCCCCGGCTCGGGGAGCTGCGGGTCTTTGACCAACACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262520.10
ENST00000297679.10
ENST00000562932.5
ENST00000574447.1
CDS GCA 90 bp TACCTGGCCGCCCATCAGGGTTGCCCGCTGCTCCAGCTCCCGGGCTaGCAGCACGTGCATCCAGGCAACATTGCCTTCCTCCCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: YLAAHQGCPLLQLPG*QHVHPGNIAFLPLA
Trigger: GGCCAACGGGAGGAAGGCAATGTTGCCTGGATGCACGTGCTGGCAGCCCGGGAGCTGGAGCAGCGGGCAACCCTGATGGGCGGCCAGGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS GCA 90 bp TACCTGGCCGCCCATCAGGGTTGCCCGCTGCTCCAGCTCCCGGGCTaGCAGCACGTGCATCCAGGCAACATTGCCCACATAGACCCGGCC +
Preference number: 5 (lower is better)
Translates to: YLAAHQGCPLLQLPG*QHVHPGNIAHIDPA
Trigger: GGCCGGGTCTATGTGGGCAATGTTGCCTGGATGCACGTGCTGGCAGCCCGGGAGCTGGAGCAGCGGGCAACCCTGATGGGCGGCCAGGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297679.10
CDS-3UTR CAA 90 bp GCTGAACCCGTAGCGGCCTGTACCCAGAGAATGGTACGGGTCCGGCTATCCTCCGGCCGCCCATCAGGGTaGCCCGCTGCTCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: AEPVAACTQRMVRVRLSSGRPSG*PAAPAP
Trigger: GGGAGCTGGAGCAGCGGGCAACCCTGATGGGCGGCC...GGAGGATAGCCGGACCCGTACCATTCTCTGGGTACAGGCCGCTACGGGTTCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS GCA 90 bp CTGTTACTGCTGGAGGTGCCCTGGAGCGGTGACGAGGCTGGCGTTTaGGGGGAGGGCAGAGCTGATCCTGGGAGCTGCAGCAACCAGGCC +
Preference number: 5 (lower is better)
Translates to: LLLLEVPWSGDEAGV*GEGRADPGSCSNQA
Trigger: GGCCTGGTTGCTGCAGCTCCCAGGATCAGCTCTGCCCTCCCCGCAAACGCCAGCCTCGTCACCGCTCCAGGGCACCTCCAGCAGTAACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS GCA 90 bp TACCAGCCCAGCCGTGTGGATGACCACATGGGCTCCGGCCACAGCTaGTGCCACCTCATGGGCCTGGGTCACGTCCCCCTGGATGGCAGT +
Preference number: 5 (lower is better)
Translates to: YQPSRVDDHMGSGHS*CHLMGLGHVPLDGS
Trigger: ACTGCCATCCAGGGGGACGTGACCCAGGCCCATGAGGTGGCAGCAGCTGTGGCCGGAGCCCATGTGGTCATCCACACGGCTGGGCTGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262520.10
ENST00000297679.10
ENST00000562932.5
ENST00000574447.1
CDS GCA 90 bp CTGTTACTGCTGGAGGTGCCCTGGAGCGGTGACGAGGCTGGCGTTTaGGGGGAGGGCAGAGCTGATCCTGGGAGCTGCAGCCGCTATCCC +
Preference number: 5 (lower is better)
Translates to: LLLLEVPWSGDEAGV*GEGRADPGSCSRYP
Trigger: GGGATAGCGGCTGCAGCTCCCAGGATCAGCTCTGCCCTCCCCGCAAACGCCAGCCTCGTCACCGCTCCAGGGCACCTCCAGCAGTAACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574447.1
CDS-3UTR CAA 90 bp CGCAGCAGCCACTGCAGCAGGGCATTGAGGGCAGCCAGGAACACCAGCAGCCAGGCTGGGGAAGAGACCTaGGCTCATCCAGGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: RSSHCSRALRAARNTSSQAGEET*AHPGAG
Trigger: GCCAGCCCCTGGATGAGCCAAGGTCTCTTCCCCAGC...CTGGCTGCTGGTGTTCCTGGCTGCCCTCAATGCCCTGCTGCAGTGGCTGCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR CAA 90 bp GTCCCCAAACCCTCCCGTGTCCTGACGGCCCTAGAACTTGGAGGTGTCAGGACAGGCCGCCCATCAGGGTaGCCCGCTGCTCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: VPKPSRVLTALELGGVRTGRPSG*PAAPAP
Trigger: GGGAGCTGGAGCAGCGGGCAACCCTGATGGGCGGCC...TGTCCTGACACCTCCAAGTTCTAGGGCCGTCAGGACACGGGAGGGTTTGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS CCA 90 bp GACCAGGTACACCAGCTTCTGGGCCTGTGCAGAGTCGGCCATGCCTaGCTGGGGAAGAGACCTTGGCTCATCCAGGGGCTGGCTGCCACC +
Preference number: 5 (lower is better)
Translates to: DQVHQLLGLCRVGHA*LGKRPWLIQGLAAT
Trigger: GGTGGCAGCCAGCCCCTGGATGAGCCAAGGTCTCTTCCCCAGCCAGGCATGGCCGACTCTGCACAGGCCCAGAAGCTGGTGTACCTGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000574447.1
CDS CCA 90 bp TCTCCCAGGAAGCCACAGCCCCCTGTGACCAGGTACACCAGCTTCTaGGCCTGTGCAGAGTCGGCCATGCCTGGCTGCAGCCGCTATCCC +
Preference number: 5 (lower is better)
Translates to: SPRKPQPPVTRYTSF*ACAESAMPGCSRYP
Trigger: GGGATAGCGGCTGCAGCCAGGCATGGCCGACTCTGCACAGGCCCAGAAGCTGGTGTACCTGGTCACAGGGGGCTGTGGCTTCCTGGGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297679.10
ENST00000562932.5
CDS-3UTR CAA 90 bp GCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTCCAGGGACCCAGGTGTaGGTCAAAGACCCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: AVPSRPGCEGSGPGWMCCPGTQV*VKDPQL
Trigger: GAGCTGCGGGTCTTTGACCAACACCTGGGTCCCTGG...ACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CAA 90 bp GCCACCAGGGCACCAGACACTCACCAAGCGGCCATCAGGACTGGGATGAGAGGACGGACCTTCCTCCCGTaGGCCTCCAGGACCAGCCAC +
Preference number: 5 (lower is better)
Translates to: ATRAPDTHQAAIRTGMRGRTFLP*ASRTSH
Trigger: GTGGCTGGTCCTGGAGGCCAACGGGAGGAAGGTCCG...TCCTCTCATCCCAGTCCTGATGGCCGCTTGGTGAGTGTCTGGTGCCCTGGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297679.10
CDS TCA 90 bp AGAGCCAACCTCCCAGGCGCAGGCCCTGGCGGTAGAAGTCCCTCATaGTCTGGTGGCCTTCACCGTAGATGCCCGTGGGACGAAGGGCAC +
Preference number: 5 (lower is better)
Translates to: RANLPGAGPGGRSPS*SGGLHRRCPWDEGH
Trigger: GTGCCCTTCGTCCCACGGGCATCTACGGTGAAGGCCACCAGATCATGAGGGACTTCTACCGCCAGGGCCTGCGCCTGGGAGGTTGGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297679.10
CDS GCA 90 bp TGGCTGGGGAAGAGACCTTGGCTCATCCAGGGGCTGGCTGCCACCTaGTGCAACCACCTGTTACTGCTGGAGGTGCCCTGGAGCGGTGAC +
Preference number: 5 (lower is better)
Translates to: WLGKRPWLIQGLAAT*CNHLLLLEVPWSGD
Trigger: GTCACCGCTCCAGGGCACCTCCAGCAGTAACAGGTGGTTGCAGCAGGTGGCAGCCAGCCCCTGGATGAGCCAAGGTCTCTTCCCCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000574447.1
CDS GCA 90 bp CCTTCCTCCCGTTGGCCTCCAGGACCAGCCACTCGGCCAGGGCCTTaGTGCAAGGATAGGGGTGCCTGTGCACTGCTTCGTATGGGGTGT +
Preference number: 5 (lower is better)
Translates to: PSSRWPPGPATRPGP*CKDRGACALLRMGC
Trigger: ACACCCCATACGAAGCAGTGCACAGGCACCCCTATCCTTGCAGCAAGGCCCTGGCCGAGTGGCTGGTCCTGGAGGCCAACGGGAGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262520.10
ENST00000297679.10
ENST00000562932.5
CDS CCA 90 bp AGGTACACCAGCTTCTGGGCCTGTGCAGAGTCGGCCATGCCTGGCTaGGGAAGAGACCTTGGCTCATCCAGGGGCTGGCTGCCACCTGCT +
Preference number: 5 (lower is better)
Translates to: RYTSFWACAESAMPG*GRDLGSSRGWLPPA
Trigger: AGCAGGTGGCAGCCAGCCCCTGGATGAGCCAAGGTCTCTTCCCCAGCCAGGCATGGCCGACTCTGCACAGGCCCAGAAGCTGGTGTACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000574447.1
CDS-3UTR CAA 90 bp ATGCAGCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTATTGCCTTCCTCCCGTaGGCCTCCAGGACCAGCCAC +
Preference number: 5 (lower is better)
Translates to: MQLSLPVQGVRARDLGGCIAFLP*ASRTSH
Trigger: GTGGCTGGTCCTGGAGGCCAACGGGAGGAAGGCAAT...ACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGCTGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS GCA 90 bp GAAGCCACAGCCCCCTGTGACCAGGTACACCAGCTTCTGGGCCTGTaGAGAGTCGGCCATGCCTGGCTGGGGAAGAGACCTTGGCTCATC +
Preference number: 5 (lower is better)
Translates to: EATAPCDQVHQLLGL*RVGHAWLGKRPWLI
Trigger: GATGAGCCAAGGTCTCTTCCCCAGCCAGGCATGGCCGACTCTGCACAGGCCCAGAAGCTGGTGTACCTGGTCACAGGGGGCTGTGGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000574447.1
CDS GCA 90 bp TCCTCCCGTTGGCCTCCAGGACCAGCCACTCGGCCAGGGCCTTGCTaGAAGGATAGGGGTGCCTGTGCACTGCTTCGTATGGGGTGTCTT +
Preference number: 5 (lower is better)
Translates to: SSRWPPGPATRPGPC*KDRGACALLRMGCL
Trigger: AAGACACCCCATACGAAGCAGTGCACAGGCACCCCTATCCTTGCAGCAAGGCCCTGGCCGAGTGGCTGGTCCTGGAGGCCAACGGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262520.10
ENST00000297679.10
ENST00000562932.5
ENST00000574447.1
CDS-3UTR CAA 90 bp GCTGTCCCTTCCCGTCCAGGGTGTGAGGGCTCGGGACCTGGGTGGATGTGCTGTACCTCATGGATGGTCTaGGGACTGGCCCTGCCAAAC +
Preference number: 5 (lower is better)
Translates to: AVPSRPGCEGSGPGWMCCTSWMV*GLALPN
Trigger: GTTTGGCAGGGCCAGTCCCAAGACCATCCATGAGGT...ACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGACGGGAAGGGACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CAA 90 bp ACACAGACTCAAGGCTCCTGGATTGAAAATGTGGAGGGCTTGGGCCAGGCGCGGGAAAATGTGGAGGGCTaGGGCCAGGCGCGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: TQTQGSWIENVEGLGQARENVEG*GQARWL
Trigger: GAGCCACCGCGCCTGGCCCAAGCCCTCCACATTTTC...CCGCGCCTGGCCCAAGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CAA 90 bp GCGGTGGCTCACACTTGTAGTTCCAGCGTTTTGGGAGGCCCACGTGGGAAGATCGAAAATGTGGAGGGCTaGGGCCAGGCGCGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: AVAHTCSSSVLGGPRGKIENVEG*GQARWL
Trigger: GAGCCACCGCGCCTGGCCCAAGCCCTCCACATTTTC...GATCTTCCCACGTGGGCCTCCCAAAACGCTGGAACTACAAGTGTGAGCCACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CAA 90 bp ACACAGACTCAAGGCTCCTGGATTGAAAATGTGGAGGGCTTGGGCCAGGCGCGGCCAGGGACCCAGGTGTaGGTCAAAGACCCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: TQTQGSWIENVEGLGQARPGTQV*VKDPQL
Trigger: GAGCTGCGGGTCTTTGACCAACACCTGGGTCCCTGG...CCGCGCCTGGCCCAAGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CAA 90 bp GCTGAACCCGTAGCGGCCTGTACCCAGAGAATGGTACGGGTCCGGCTATCCTCCACCTCATGGATGGTCTaGGGACTGGCCCTGCCAAAC +
Preference number: 5 (lower is better)
Translates to: AEPVAACTQRMVRVRLSSTSWMV*GLALPN
Trigger: GTTTGGCAGGGCCAGTCCCAAGACCATCCATGAGGT...GGAGGATAGCCGGACCCGTACCATTCTCTGGGTACAGGCCGCTACGGGTTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS-3UTR CAA 90 bp GCCACCAGGGCACCAGACACTCACCAAGCGGCCATCAGGACTGGGATGAGAGGACGGGTACCCTGCACGTaGACCTCATGGATGGTCTTG +
Preference number: 5 (lower is better)
Translates to: ATRAPDTHQAAIRTGMRGRVPCT*TSWMVL
Trigger: CAAGACCATCCATGAGGTCAACGTGCAGGGTACCCG...TCCTCTCATCCCAGTCCTGATGGCCGCTTGGTGAGTGTCTGGTGCCCTGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CAA 90 bp GAGAATGGTACGGGTCCGGCTATCCTCCCACGAGAACAGGGGCTCATAGCCGAATGCATCCAGGCAACATaGCCTTCCTCCCGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: ENGTGPAILPREQGLIAECIQAT*PSSRWP
Trigger: AGGCCAACGGGAGGAAGGCAATGTTGCCTGGATGCA...TTCGGCTATGAGCCCCTGTTCTCGTGGGAGGATAGCCGGACCCGTACCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS TCA 90 bp GGGGCCCAGGAACTCCATGTTGAAATCCTCGTAGCTCCTGTAGGGTaGTCCATCGTAGCAGAAGTATACCTGGCCGCCCATCAGGGTTGC +
Preference number: 5 (lower is better)
Translates to: GAQELHVEILVAPVG*SIVAEVYLAAHQGC
Trigger: GCAACCCTGATGGGCGGCCAGGTATACTTCTGCTACGATGGATCACCCTACAGGAGCTACGAGGATTTCAACATGGAGTTCCTGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CAA 90 bp GCGGTGGCTCACACTTGTAGTTCCAGCGTTTTGGGAGGCCCACGTGGGAAGATCCTCAAGGCTCCTGGATaGAAAATGTGGAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: AVAHTCSSSVLGGPRGKILKAPG*KMWRAW
Trigger: CCAAGCCCTCCACATTTTCAATCCAGGAGCCTTGAG...GATCTTCCCACGTGGGCCTCCCAAAACGCTGGAACTACAAGTGTGAGCCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CAA 90 bp AACCAGAGCCGCCTCTGCACTCTGCACCGAGGGTCGCGTGTGGCTGTCAGGAGATTGAAGGTGAGGCCTTaGAAAAACAATGGGAACATC +
Preference number: 5 (lower is better)
Translates to: NQSRLCTLHRGSRVAVRRLKVRP*KNNGNI
Trigger: GATGTTCCCATTGTTTTTCAAAGGCCTCACCTTCAA...TCTCCTGACAGCCACACGCGACCCTCGGTGCAGAGTGCAGAGGCGGCTCTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CAA 90 bp GGTGTCAGGACACAACACAGACTCAAGGCTCCTGGATTGAAAATGTGGAGGGCTCGGGTACCCTGCACGTaGACCTCATGGATGGTCTTG +
Preference number: 5 (lower is better)
Translates to: GVRTQHRLKAPGLKMWRARVPCT*TSWMVL
Trigger: CAAGACCATCCATGAGGTCAACGTGCAGGGTACCCG...AGCCCTCCACATTTTCAATCCAGGAGCCTTGAGTCTGTGTTGTGTCCTGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CAA 90 bp AAAACAATGGGAACATCACCTCCCAAAGAGGGACTGAGGTGGCTGGAGGAACCACTCAAGGCTCCTGGATaGAAAATGTGGAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: KTMGTSPPKEGLRWLEEPLKAPG*KMWRAW
Trigger: CCAAGCCCTCCACATTTTCAATCCAGGAGCCTTGAG...TGGTTCCTCCAGCCACCTCAGTCCCTCTTTGGGAGGTGATGTTCCCATTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS-3UTR CAA 90 bp AGAAAATGTGGAGGGCTCTACGACAAGGACAGCCATTCTGGCCCCAGAGCCCTGTTGAAGGTGAGGCCTTaGAAAAACAATGGGAACATC +
Preference number: 5 (lower is better)
Translates to: RKCGGLYDKDSHSGPRALLKVRP*KNNGNI
Trigger: GATGTTCCCATTGTTTTTCAAAGGCCTCACCTTCAA...CAGGGCTCTGGGGCCAGAATGGCTGTCCTTGTCGTAGAGCCCTCCACATTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS CCA 72 bp GGGCGGGCTGCAGCCGCTATCCCAGGGTGCCCAGACTaGCCTGGAGGGGCCCTCTTCTTTCGTCCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: GRAAAAIPGCPD*PGGALFFRPGL
Trigger: CAGCCCTGGACGAAAGAAGAGGGCCCCTCCAGGCCAGTCTGGGCACCCTGGGATAGCGGCTGCAGCCCGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS GCA 72 bp GGCGTTTGCGGGGAGGGCAGAGCTGATCCTGGGAGCTaGAGCAACCAGGCCACCTGCCGTCTGCCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: GVCGEGRADPGS*SNQATCRLPLL
Trigger: CAGCAGGGGCAGACGGCAGGTGGCCTGGTTGCTGCAGCTCCCAGGATCAGCTCTGCCCTCCCCGCAAACGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS GCA 72 bp AGCCGGGGCTCCCGCTGCAGCAGCATTCGCACCACGTaGTCTCCCAGGAAGCCACAGCCCCCTGTGACCAGG +
Preference number: 6 (lower is better)
Translates to: SRGSRCSSIRTT*SPRKPQPPVTR
Trigger: CCTGGTCACAGGGGGCTGTGGCTTCCTGGGAGAGCACGTGGTGCGAATGCTGCTGCAGCGGGAGCCCCGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262520.10
ENST00000297679.10
ENST00000562932.5
ENST00000574447.1
CDS CCA 72 bp CCACATAGACCCGGCCATGCTCCACAGAGGCCGGGATaGCCCGGAAGAGCCAACCTCCCAGGCGCAGGCCCT +
Preference number: 6 (lower is better)
Translates to: PHRPGHAPQRPG*PGRANLPGAGP
Trigger: AGGGCCTGCGCCTGGGAGGTTGGCTCTTCCGGGCCATCCCGGCCTCTGTGGAGCATGGCCGGGTCTATGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297679.10
CDS GCA 72 bp AGGGGCTGGCTGCCACCTGCTGCAACCACCTGTTACTaGTGGAGGTGCCCTGGAGCGGTGACGAGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: RGWLPPAATTCY*WRCPGAVTRLA
Trigger: CGCCAGCCTCGTCACCGCTCCAGGGCACCTCCAGCAGTAACAGGTGGTTGCAGCAGGTGGCAGCCAGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000574447.1
CDS GCA 72 bp TCAAAGACCCGCAGCTCCCCGAGCCGGGGCTCCCGCTaGAGCAGCATTCGCACCACGTGCTCTCCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: SKTRSSPSRGSR*SSIRTTCSPRK
Trigger: CTTCCTGGGAGAGCACGTGGTGCGAATGCTGCTGCAGCGGGAGCCCCGGCTCGGGGAGCTGCGGGTCTTTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262520.10
ENST00000297679.10
ENST00000562932.5
ENST00000574447.1
CDS TCA 72 bp CAACCAGGCCACCTGCCGTCTGCCCCTGCTGATGGCTaGGTTACGGAGAGAGGGGCGGGCTGCAGCCGCTAT +
Preference number: 6 (lower is better)
Translates to: QPGHLPSAPADG*VTERGAGCSRY
Trigger: ATAGCGGCTGCAGCCCGCCCCTCTCTCCGTAACTCAGCCATCAGCAGGGGCAGACGGCAGGTGGCCTGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS GCA 72 bp GCCCATCAGGGTTGCCCGCTGCTCCAGCTCCCGGGCTaGCAGCACGTGCATCCAGGCAACATTGCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: AHQGCPLLQLPG*QHVHPGNIAFL
Trigger: GAGGAAGGCAATGTTGCCTGGATGCACGTGCTGGCAGCCCGGGAGCTGGAGCAGCGGGCAACCCTGATGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262520.10
CDS GCA 72 bp CAGAAGTATACCTGGCCGCCCATCAGGGTTGCCCGCTaGTCCAGCTCCCGGGCTGCCAGCACGTGCATCCAG +
Preference number: 6 (lower is better)
Translates to: QKYTWPPIRVAR*SSSRAASTCIQ
Trigger: CTGGATGCACGTGCTGGCAGCCCGGGAGCTGGAGCAGCGGGCAACCCTGATGGGCGGCCAGGTATACTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS CCA 72 bp CTGGCCCTGCCAAACACGTCTACCAGCCCAGCCGTGTaGATGACCACATGGGCTCCGGCCACAGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: LALPNTSTSPAV*MTTWAPATAAA
Trigger: GGCAGCAGCTGTGGCCGGAGCCCATGTGGTCATCCACACGGCTGGGCTGGTAGACGTGTTTGGCAGGGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262520.10
ENST00000297679.10
ENST00000562932.5
ENST00000574447.1
CDS TCA 72 bp CTCCCAGGCGCAGGCCCTGGCGGTAGAAGTCCCTCATaGTCTGGTGGCCTTCACCGTAGATGCCCGTGGGAC +
Preference number: 6 (lower is better)
Translates to: LPGAGPGGRSPS*SGGLHRRCPWD
Trigger: GTCCCACGGGCATCTACGGTGAAGGCCACCAGATCATGAGGGACTTCTACCGCCAGGGCCTGCGCCTGGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297679.10
CDS GCA 72 bp ATCGTAGCAGAAGTATACCTGGCCGCCCATCAGGGTTaGCCGCTGCTCCAGCTCCCGGGCTGCCAGCACGTG +
Preference number: 6 (lower is better)
Translates to: IVAEVYLAAHQG*PLLQLPGCQHV
Trigger: CACGTGCTGGCAGCCCGGGAGCTGGAGCAGCGGGCAACCCTGATGGGCGGCCAGGTATACTTCTGCTACGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS GCA 72 bp GCCCATCAGGGTTGCCCGCTGCTCCAGCTCCCGGGCTaGCAGCACGTGCATCCAGGCAACATTGCCCACATA +
Preference number: 6 (lower is better)
Translates to: AHQGCPLLQLPG*QHVHPGNIAHI
Trigger: TATGTGGGCAATGTTGCCTGGATGCACGTGCTGGCAGCCCGGGAGCTGGAGCAGCGGGCAACCCTGATGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297679.10
CDS CCA 72 bp AGCTTCTGGGCCTGTGCAGAGTCGGCCATGCCTGGCTaGGGAAGAGACCTTGGCTCATCCAGGGGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: SFWACAESAMPG*GRDLGSSRGWL
Trigger: CAGCCAGCCCCTGGATGAGCCAAGGTCTCTTCCCCAGCCAGGCATGGCCGACTCTGCACAGGCCCAGAAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000574447.1
CDS CCA 72 bp CACCAGCTTCTGGGCCTGTGCAGAGTCGGCCATGCCTaGCTGGGGAAGAGACCTTGGCTCATCCAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: HQLLGLCRVGHA*LGKRPWLIQGL
Trigger: CAGCCCCTGGATGAGCCAAGGTCTCTTCCCCAGCCAGGCATGGCCGACTCTGCACAGGCCCAGAAGCTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000574447.1
CDS CCA 72 bp AAGCCACAGCCCCCTGTGACCAGGTACACCAGCTTCTaGGCCTGTGCAGAGTCGGCCATGCCTGGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: KPQPPVTRYTSF*ACAESAMPGCS
Trigger: GCTGCAGCCAGGCATGGCCGACTCTGCACAGGCCCAGAAGCTGGTGTACCTGGTCACAGGGGGCTGTGGCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297679.10
ENST00000562932.5
CDS CAA 90 bp AGGGTGATCCATCGTAGCAGAAGTATACCTGGCCGCCCATCAGGGTaGCCCGCTGCTCCAGCTCCCGGGCTGCCAGCACGTGCATCCAGG +
Preference number: 6 (lower is better)
Translates to: RVIHRSRSIPGRPSG*PAAPAPGLPARASR
Trigger: CCTGGATGCACGTGCTGGCAGCCCGGGAGCTGGAGCAGCGGGCAACCCTGATGGGCGGCCAGGTATACTTCTGCTACGATGGATCACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10
CDS GCA 72 bp GGTACACCAGCTTCTGGGCCTGTGCAGAGTCGGCCATaGCTGGCTGGGGAAGAGACCTTGGCTCATCCAGGG +
Preference number: 6 (lower is better)
Translates to: GTPASGPVQSRP*LAGEETLAHPG
Trigger: CCCTGGATGAGCCAAGGTCTCTTCCCCAGCCAGGCATGGCCGACTCTGCACAGGCCCAGAAGCTGGTGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000574447.1
CDS GCA 72 bp AAGAGACCTTGGCTCATCCAGGGGCTGGCTGCCACCTaGTGCAACCACCTGTTACTGCTGGAGGTGCCCTGG +
Preference number: 6 (lower is better)
Translates to: KRPWLIQGLAAT*CNHLLLLEVPW
Trigger: CCAGGGCACCTCCAGCAGTAACAGGTGGTTGCAGCAGGTGGCAGCCAGCCCCTGGATGAGCCAAGGTCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000574447.1
CDS CAA 90 bp TCGATCACGTTCCGGGTACCCTGCACGTTGACCTCATGGATGGTCTaGGGACTGGCCCTGCCAAACACGTCTACCAGCCCAGCCGTGTGG +
Preference number: 6 (lower is better)
Translates to: SITFRVPCTLTSWMV*GLALPNTSTSPAVW
Trigger: CCACACGGCTGGGCTGGTAGACGTGTTTGGCAGGGCCAGTCCCAAGACCATCCATGAGGTCAACGTGCAGGGTACCCGGAACGTGATCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262520.10
ENST00000297679.10
ENST00000562932.5
ENST00000574447.1
CDS CAA 72 bp TTCCGGGTACCCTGCACGTTGACCTCATGGATGGTCTaGGGACTGGCCCTGCCAAACACGTCTACCAGCCCA +
Preference number: 6 (lower is better)
Translates to: FRVPCTLTSWMV*GLALPNTSTSP
Trigger: TGGGCTGGTAGACGTGTTTGGCAGGGCCAGTCCCAAGACCATCCATGAGGTCAACGTGCAGGGTACCCGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262520.10
ENST00000297679.10
ENST00000562932.5
ENST00000574447.1
CDS CCA 72 bp TCGATCACGTTCCGGGTACCCTGCACGTTGACCTCATaGATGGTCTTGGGACTGGCCCTGCCAAACACGTCT +
Preference number: 6 (lower is better)
Translates to: SITFRVPCTLTS*MVLGLALPNTS
Trigger: AGACGTGTTTGGCAGGGCCAGTCCCAAGACCATCCATGAGGTCAACGTGCAGGGTACCCGGAACGTGATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262520.10
ENST00000297679.10
ENST00000562932.5
ENST00000574447.1
CDS TCA 72 bp GAACTCCATGTTGAAATCCTCGTAGCTCCTGTAGGGTaGTCCATCGTAGCAGAAGTATACCTGGCCGCCCAT +
Preference number: 6 (lower is better)
Translates to: ELHVEILVAPVG*SIVAEVYLAAH
Trigger: ATGGGCGGCCAGGTATACTTCTGCTACGATGGATCACCCTACAGGAGCTACGAGGATTTCAACATGGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262520.10
ENST00000297679.10