RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HSD17B8 (Homo sapiens)

Ensembl gene IDs: ENSG00000112474, ENSG00000232357

Ensembl transcript IDs: ENST00000230236.4, ENST00000374662.4, ENST00000414463.2, ENST00000422433.2, ENST00000427295.2, ENST00000454191.2, ENST00000461067.1, ENST00000469186.1, ENST00000476285.1, ENST00000480183.1, ENST00000481255.1, ENST00000490492.1

Found 233 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTaGGAACTTAGAGTCCTCATCAGCAGGAGGCCAGGCAGAGTGGTG +
Preference number: 1 (lower is better)
Translates to: IFSIPEPYTATPFVS*ELRVLISRRPGRVV
Trigger: CACCACTCTGCCTGGCCTCCTGCTGATGAGGACTCTAAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
3UTR CAA 90 bp TGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTaGTATCCTGGGAACTTAGAGTCCTCATCAGCAGGAGGCCAGGCA +
Preference number: 2 (lower is better)
Translates to: CFPYSAFLNHTLPPL*YPGNLESSSAGGQA
Trigger: TGCCTGGCCTCCTGCTGATGAGGACTCTAAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
3UTR-3UTR CAA 90 bp GACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCACACTGCCACCCCTTTaGTATCCTGGGAACTTAGAG +
Preference number: 3 (lower is better)
Translates to: DLEFIRVTSTPASHIQHSTLPPL*YPGNLE
Trigger: CTCTAAGTTCCCAGGATACAAAAGGGGTGGCAGTGT...GGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
3UTR-3UTR CAA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCAACACTGCCACCCCTTTaGTATCCTGGGAACTTAGAG +
Preference number: 3 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPTLPPL*YPGNLE
Trigger: CTCTAAGTTCCCAGGATACAAAAGGGGTGGCAGTGT...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp GGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCCGGCCAGGCGTACACTaGCCGCTCGGCCGATGCCGC +
Preference number: 4 (lower is better)
Translates to: GSQAPLLPIFSIPEPYTARPGVH*PLGRCR
Trigger: GCGGCATCGGCCGAGCGGTCAGTGTACGCCTGGCCG...GGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTCGCAGGCAGCTACGGTaGCCCCCTCTCCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPRRQLR*PPLRPG
Trigger: GCCTGGCCGGAGAGGGGGCCACCGTAGCTGCCTGCG...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp GGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCCGCAGGCAGCTACGGTaGCCCCCTCTCCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GSQAPLLPIFSIPEPYTARRQLR*PPLRPG
Trigger: GCCTGGCCGGAGAGGGGGCCACCGTAGCTGCCTGCG...GGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTCGGCCAGGCGTACACTaGCCGCTCGGCCGATGCCGC +
Preference number: 4 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLRPGVH*PLGRCR
Trigger: GCGGCATCGGCCGAGCGGTCAGTGTACGCCTGGCCG...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTCCGCACCGTCTCCTGTaGCGCTGCCCGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPPHRLL*RCPVQV
Trigger: GACCTGGACCGGGCAGCGGCACAGGAGACGGTGCGG...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp GGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCCCGCACCGTCTCCTGTaGCGCTGCCCGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GSQAPLLPIFSIPEPYTAPHRLL*RCPVQV
Trigger: GACCTGGACCGGGCAGCGGCACAGGAGACGGTGCGG...GGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTCGCAGGCAGCTACGGTaGCCCCCTCTCCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLRRQLR*PPLRPG
Trigger: GCCTGGCCGGAGAGGGGGCCACCGTAGCTGCCTGCG...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp GCAGGGAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATACGGCCAGGCGTACACTaGCCGCTCGGCCGATGCCGC +
Preference number: 4 (lower is better)
Translates to: AGKRTWNLLGSQAPLLPIRPGVH*PLGRCR
Trigger: GCGGCATCGGCCGAGCGGTCAGTGTACGCCTGGCCG...TATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp TCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCGTCTCCTGTGCCGCTaGCCGGTCCAGGTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: SQAPLLPIFSIPEPYTATRLLCR*PVQVAG
Trigger: GCCTGCGACCTGGACCGGGCAGCGGCACAGGAGACG...GGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp TCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCGCACCGTCTCCTGTaGCGCTGCCCGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SQAPLLPIFSIPEPYTATPHRLL*RCPVQV
Trigger: GACCTGGACCGGGCAGCGGCACAGGAGACGGTGCGG...GGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp GGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCGGAGCTGAGACGCCATaGCGGGCTGTGGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GSQAPLLPIFSIPEPYTAGAETP*RAVGGW
Trigger: CCACCCACCCACAGCCCGCCATGGCGTCTCAGCTCC...GGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230236.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp CCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACCGGCCAGGCGTACACTaGCCGCTCGGCCGATGCCGC +
Preference number: 4 (lower is better)
Translates to: PYSAFLNHTLPPLLYPGNRPGVH*PLGRCR
Trigger: GCGGCATCGGCCGAGCGGTCAGTGTACGCCTGGCCG...GTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp TCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCGGAGCTGAGACGCCATaGCGGGCTGTGGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SQAPLLPIFSIPEPYTATGAETP*RAVGGW
Trigger: CCACCCACCCACAGCCCGCCATGGCGTCTCAGCTCC...GGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230236.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTGGAGCTGAGACGCCATaGCGGGCTGTGGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLGAETP*RAVGGW
Trigger: CCACCCACCCACAGCCCGCCATGGCGTCTCAGCTCC...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230236.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp CCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCGCAGGCAGCTACGGTaGCCCCCTCTCCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PCFPYSAFLNHTLPPLLYRRQLR*PPLRPG
Trigger: GCCTGGCCGGAGAGGGGGCCACCGTAGCTGCCTGCG...ATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp TCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCGGCACCTGGCGGCCCTaGCCTCAGACACGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SQAPLLPIFSIPEPYTATGTWRP*PQTRQP
Trigger: AGGCTGACGTGTCTGAGGCCAGGGCCGCCAGGTGCC...GGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp GGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCGTTCCAGCAGGCACCTaGCGGCCCTGGCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: GSQAPLLPIFSIPEPYTAVPAGT*RPWPQT
Trigger: TGTCTGAGGCCAGGGCCGCCAGGTGCCTGCTGGAAC...GGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTGTTCCAGCAGGCACCTaGCGGCCCTGGCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPVPAGT*RPWPQT
Trigger: TGTCTGAGGCCAGGGCCGCCAGGTGCCTGCTGGAAC...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp GACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCCGGCCAGGCGTACACTaGCCGCTCGGCCGATGCCGC +
Preference number: 4 (lower is better)
Translates to: DLEFIRVTSTPASHIQHSRPGVH*PLGRCR
Trigger: GCGGCATCGGCCGAGCGGTCAGTGTACGCCTGGCCG...GGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp GCAGGGAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATAGGCACCTGGCGGCCCTaGCCTCAGACACGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: AGKRTWNLLGSQAPLLPIGTWRP*PQTRQP
Trigger: AGGCTGACGTGTCTGAGGCCAGGGCCGCCAGGTGCC...TATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTGTTCCAGCAGGCACCTaGCGGCCCTGGCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLVPAGT*RPWPQT
Trigger: TGTCTGAGGCCAGGGCCGCCAGGTGCCTGCTGGAAC...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCACGGCCAGGCGTACACTaGCCGCTCGGCCGATGCCGC +
Preference number: 4 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPRPGVH*PLGRCR
Trigger: GCGGCATCGGCCGAGCGGTCAGTGTACGCCTGGCCG...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp GGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCGCTTGTGCTGCAGCCTaGGTGACTAGGAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GSQAPLLPIFSIPEPYTAACAAA*VTRKVP
Trigger: GGGCACCTTCCTAGTCACTCAGGCTGCAGCACAAGC...GGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp GGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCTGTGACCAAGGCCAGTaGGGAGCGGAGTCGGTTCTG +
Preference number: 4 (lower is better)
Translates to: GSQAPLLPIFSIPEPYTACDQGQ*GAESVL
Trigger: CAGAACCGACTCCGCTCCGCACTGGCCTTGGTCACA...GGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTGTGACCAAGGCCAGTaGGGAGCGGAGTCGGTTCTG +
Preference number: 4 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPCDQGQ*GAESVL
Trigger: CAGAACCGACTCCGCTCCGCACTGGCCTTGGTCACA...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTCCAAGCTCCCGGGCTaGGGTCTGGGTCAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLSKLPG*GLGQPN
Trigger: ATTGGGCTGACCCAGACCGCAGCCCGGGAGCTTGGA...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp TCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCTCCAAGCTCCCGGGCTaGGGTCTGGGTCAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: SQAPLLPIFSIPEPYTATSKLPG*GLGQPN
Trigger: ATTGGGCTGACCCAGACCGCAGCCCGGGAGCTTGGA...GGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp CCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACGGAGCTGAGACGCCATaGCGGGCTGTGGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PYSAFLNHTLPPLLYPGNGAETP*RAVGGW
Trigger: CCACCCACCCACAGCCCGCCATGGCGTCTCAGCTCC...GTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230236.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp TGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACGCAGGCAGCTACGGTaGCCCCCTCTCCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: WNLLGSQAPLLPIFSIPERRQLR*PPLRPG
Trigger: GCCTGGCCGGAGAGGGGGCCACCGTAGCTGCCTGCG...TTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCACGCTCCCCGCACCTGTaGCCAAGGCCAGTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPRSPHL*PRPVRS
Trigger: GCTCCGCACTGGCCTTGGTCACAGGTGCGGGGAGCG...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp TCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCGCTTGTGCTGCAGCCTaGGTGACTAGGAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SQAPLLPIFSIPEPYTATACAAA*VTRKVP
Trigger: GGGCACCTTCCTAGTCACTCAGGCTGCAGCACAAGC...GGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTGCTTGTGCTGCAGCCTaGGTGACTAGGAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLACAAA*VTRKVP
Trigger: GGGCACCTTCCTAGTCACTCAGGCTGCAGCACAAGC...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp TCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCTGTGACCAAGGCCAGTaGGGAGCGGAGTCGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SQAPLLPIFSIPEPYTATCDQGQ*GAESVL
Trigger: CAGAACCGACTCCGCTCCGCACTGGCCTTGGTCACA...GGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCACCGCACCGTCTCCTGTaGCGCTGCCCGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPPHRLL*RCPVQV
Trigger: GACCTGGACCGGGCAGCGGCACAGGAGACGGTGCGG...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp GCAGGGAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATCCAAGCTCCCGGGCTaGGGTCTGGGTCAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: AGKRTWNLLGSQAPLLPISKLPG*GLGQPN
Trigger: ATTGGGCTGACCCAGACCGCAGCCCGGGAGCTTGGA...TATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTGAATGCGACCACATCTaGCACATCCTCAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPECDHI*HILRVP
Trigger: GGGGACCCTGAGGATGTGGCAGATGTGGTCGCATTC...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp GAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGGGCACCTGGCGGCCCTaGCCTCAGACACGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: EEDLEFIRVTSTPASHIQGTWRP*PQTRQP
Trigger: AGGCTGACGTGTCTGAGGCCAGGGCCGCCAGGTGCC...CTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp GACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCGGCACCTGGCGGCCCTaGCCTCAGACACGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: DLEFIRVTSTPASHIQHSGTWRP*PQTRQP
Trigger: AGGCTGACGTGTCTGAGGCCAGGGCCGCCAGGTGCC...GGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp GCAGGGAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATCCCGGGCTGCGGTCTaGGTCAGCCCAATCACTCCA +
Preference number: 4 (lower is better)
Translates to: AGKRTWNLLGSQAPLLPISRAAV*VSPITP
Trigger: TGGAGTGATTGGGCTGACCCAGACCGCAGCCCGGGA...TATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp CCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATAGTCGGTTCTGGAGCTaGGACGCCATGGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PCFPYSAFLNHTLPPLLYSRFWS*DAMAGC
Trigger: ACAGCCCGCCATGGCGTCTCAGCTCCAGAACCGACT...ATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp CCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTCCAAGCTCCCGGGCTaGGGTCTGGGTCAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: PYSAFLNHTLPPLLYPGNSKLPG*GLGQPN
Trigger: ATTGGGCTGACCCAGACCGCAGCCCGGGAGCTTGGA...GTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTGAATGCGACCACATCTaGCACATCCTCAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLECDHI*HILRVP
Trigger: GGGGACCCTGAGGATGTGGCAGATGTGGTCGCATTC...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTGGAGCTGAGACGCCATaGCGGGCTGTGGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: IFSIPEPYTATPFVSWELGAETP*RAVGGW
Trigger: CCACCCACCCACAGCCCGCCATGGCGTCTCAGCTCC...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230236.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTCAGACACGTCAGCCTaGAAGGCAGCATGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPSDTSA*KAAWFP
Trigger: AGGGAACCATGCTGCCTTCCAGGCTGACGTGTCTGA...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp TGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAAGGCACCTGGCGGCCCTaGCCTCAGACACGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: WNLLGSQAPLLPIFSIPEGTWRP*PQTRQP
Trigger: AGGCTGACGTGTCTGAGGCCAGGGCCGCCAGGTGCC...TTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp GACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCGTTCCAGCAGGCACCTaGCGGCCCTGGCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: DLEFIRVTSTPASHIQHSVPAGT*RPWPQT
Trigger: TGTCTGAGGCCAGGGCCGCCAGGTGCCTGCTGGAAC...GGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTCACAACGACAGATGGTaGGCGAGAAAAGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPHNDRW*ARKAGL
Trigger: CAGGCCTGCTTTTCTCGCCCACCATCTGTCGTTGTG...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp CCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTCCCGGGCTGCGGTCTaGGTCAGCCCAATCACTCCA +
Preference number: 4 (lower is better)
Translates to: PYSAFLNHTLPPLLYPGNSRAAV*VSPITP
Trigger: TGGAGTGATTGGGCTGACCCAGACCGCAGCCCGGGA...GTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp GAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGAGTCGGTTCTGGAGCTaGGACGCCATGGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: EEDLEFIRVTSTPASHIQSRFWS*DAMAGC
Trigger: ACAGCCCGCCATGGCGTCTCAGCTCCAGAACCGACT...CTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTGAAACTCATCCTGGGTaGTGCCCGCACAGGACACAA +
Preference number: 4 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLETHPG*CPHRTQ
Trigger: TTGTGTCCTGTGCGGGCATCACCCAGGATGAGTTTC...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp GGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCTCCAGTGACTTCCACTaGGGTCCCTGTGATGTATCC +
Preference number: 4 (lower is better)
Translates to: GSQAPLLPIFSIPEPYTASSDFH*GPCDVS
Trigger: GGATACATCACAGGGACCTCAGTGGAAGTCACTGGA...GGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTCCAGTGACTTCCACTaGGGTCCCTGTGATGTATCC +
Preference number: 4 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPSSDFH*GPCDVS
Trigger: GGATACATCACAGGGACCTCAGTGGAAGTCACTGGA...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTCCAGCCTTGGATGCTaGATAGTTTGTCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPSSLGC*IVCLPH
Trigger: GTGGGGCAGACAAACTATGCAGCATCCAAGGCTGGA...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp GGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCCACTCCAGCCTTGGATaGTGCATAGTTTGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: GSQAPLLPIFSIPEPYTAHSSLG*CIVCLP
Trigger: GGGCAGACAAACTATGCAGCATCCAAGGCTGGAGTG...GGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTCTGTGTCATGGGTGTTaGAATGAACCCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPLCHGC*NEPWED
Trigger: GTCCTCCCAGGGTTCATTGCAACACCCATGACACAG...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp TCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCTCAGACACGTCAGCCTaGAAGGCAGCATGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: SQAPLLPIFSIPEPYTATSDTSA*KAAWFP
Trigger: AGGGAACCATGCTGCCTTCCAGGCTGACGTGTCTGA...GGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTCAGACACGTCAGCCTaGAAGGCAGCATGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLSDTSA*KAAWFP
Trigger: AGGGAACCATGCTGCCTTCCAGGCTGACGTGTCTGA...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp TGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAAGTTCCAGCAGGCACCTaGCGGCCCTGGCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: WNLLGSQAPLLPIFSIPEVPAGT*RPWPQT
Trigger: TGTCTGAGGCCAGGGCCGCCAGGTGCCTGCTGGAAC...TTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTCACAACGACAGATGGTaGGCGAGAAAAGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLHNDRW*ARKAGL
Trigger: CAGGCCTGCTTTTCTCGCCCACCATCTGTCGTTGTG...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp GAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGTCCCGGGCTGCGGTCTaGGTCAGCCCAATCACTCCA +
Preference number: 4 (lower is better)
Translates to: EEDLEFIRVTSTPASHIQSRAAV*VSPITP
Trigger: TGGAGTGATTGGGCTGACCCAGACCGCAGCCCGGGA...CTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTAGTCGGTTCTGGAGCTaGGACGCCATGGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: IFSIPEPYTATPFVSWELSRFWS*DAMAGC
Trigger: ACAGCCCGCCATGGCGTCTCAGCTCCAGAACCGACT...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp TGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAAAGTCGGTTCTGGAGCTaGGACGCCATGGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: WNLLGSQAPLLPIFSIPESRFWS*DAMAGC
Trigger: ACAGCCCGCCATGGCGTCTCAGCTCCAGAACCGACT...TTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp GAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGGCTTGTGCTGCAGCCTaGGTGACTAGGAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: EEDLEFIRVTSTPASHIQACAAA*VTRKVP
Trigger: GGGCACCTTCCTAGTCACTCAGGCTGCAGCACAAGC...CTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTCCAGTGACTTCCACTaGGGTCCCTGTGATGTATCC +
Preference number: 4 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLSSDFH*GPCDVS
Trigger: GGATACATCACAGGGACCTCAGTGGAAGTCACTGGA...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp GACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGTGACCAAGGCCAGTaGGGAGCGGAGTCGGTTCTG +
Preference number: 4 (lower is better)
Translates to: DLEFIRVTSTPASHIQHSCDQGQ*GAESVL
Trigger: CAGAACCGACTCCGCTCCGCACTGGCCTTGGTCACA...GGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp TCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCTCCAGCCTTGGATGCTaGATAGTTTGTCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SQAPLLPIFSIPEPYTATSSLGC*IVCLPH
Trigger: GTGGGGCAGACAAACTATGCAGCATCCAAGGCTGGA...GGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTCCAGCCTTGGATGCTaGATAGTTTGTCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLSSLGC*IVCLPH
Trigger: GTGGGGCAGACAAACTATGCAGCATCCAAGGCTGGA...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp TCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCACTCCAGCCTTGGATaGTGCATAGTTTGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: SQAPLLPIFSIPEPYTATHSSLG*CIVCLP
Trigger: GGGCAGACAAACTATGCAGCATCCAAGGCTGGAGTG...GGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTCACTCCAGCCTTGGATaGTGCATAGTTTGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLHSSLG*CIVCLP
Trigger: GGGCAGACAAACTATGCAGCATCCAAGGCTGGAGTG...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp TGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAATCCAAGCTCCCGGGCTaGGGTCTGGGTCAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: WNLLGSQAPLLPIFSIPESKLPG*GLGQPN
Trigger: ATTGGGCTGACCCAGACCGCAGCCCGGGAGCTTGGA...TTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTTCCAAGCTCCCGGGCTaGGGTCTGGGTCAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: IFSIPEPYTATPFVSWELSKLPG*GLGQPN
Trigger: ATTGGGCTGACCCAGACCGCAGCCCGGGAGCTTGGA...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTCTGTGTCATGGGTGTTaGAATGAACCCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLLCHGC*NEPWED
Trigger: GTCCTCCCAGGGTTCATTGCAACACCCATGACACAG...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp CCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACGAATGCGACCACATCTaGCACATCCTCAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PYSAFLNHTLPPLLYPGNECDHI*HILRVP
Trigger: GGGGACCCTGAGGATGTGGCAGATGTGGTCGCATTC...GTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp GGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCGGTCACAAGCACCCCTaGTTCCCATATTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: GSQAPLLPIFSIPEPYTAGHKHP*FPYSAF
Trigger: GAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACC...GGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp GCAGGGAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATACACAACGACAGATGGTaGGCGAGAAAAGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: AGKRTWNLLGSQAPLLPIHNDRW*ARKAGL
Trigger: CAGGCCTGCTTTTCTCGCCCACCATCTGTCGTTGTG...TATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp GCAGGGAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATAAGCAGAAACTCATCCTaGGTGATGCCCGCACAGGAC +
Preference number: 4 (lower is better)
Translates to: AGKRTWNLLGSQAPLLPISRNSS*VMPAQD
Trigger: GTCCTGTGCGGGCATCACCCAGGATGAGTTTCTGCT...TATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTTCCCGGGCTGCGGTCTaGGTCAGCCCAATCACTCCA +
Preference number: 4 (lower is better)
Translates to: IFSIPEPYTATPFVSWELSRAAV*VSPITP
Trigger: TGGAGTGATTGGGCTGACCCAGACCGCAGCCCGGGA...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATCCCGGGCTGCGGTCTaGGTCAGCCCAATCACTCCA +
Preference number: 4 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPSRAAV*VSPITP
Trigger: TGGAGTGATTGGGCTGACCCAGACCGCAGCCCGGGA...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp TGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAAGCTTGTGCTGCAGCCTaGGTGACTAGGAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: WNLLGSQAPLLPIFSIPEACAAA*VTRKVP
Trigger: GGGCACCTTCCTAGTCACTCAGGCTGCAGCACAAGC...TTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCAGCTTGTGCTGCAGCCTaGGTGACTAGGAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPACAAA*VTRKVP
Trigger: GGGCACCTTCCTAGTCACTCAGGCTGCAGCACAAGC...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp GCAGGGAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATCATGGGTGTTGCAATaGACCCTGGGAGGACAGAGT +
Preference number: 4 (lower is better)
Translates to: AGKRTWNLLGSQAPLLPISWVLQ*TLGGQS
Trigger: ACTCTGTCCTCCCAGGGTTCATTGCAACACCCATGA...TATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTCATCCTCAGACATGTaGAGCAGAAACTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPSSSDM*SRNSSW
Trigger: CCAGGATGAGTTTCTGCTGCACATGTCTGAGGATGA...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp GCAGGGAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATACACTCCAGCCTTGGATaGTGCATAGTTTGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: AGKRTWNLLGSQAPLLPIHSSLG*CIVCLP
Trigger: GGGCAGACAAACTATGCAGCATCCAAGGCTGGAGTG...TATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp GCAGGGAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATACTGTGTCATGGGTGTTaGAATGAACCCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: AGKRTWNLLGSQAPLLPILCHGC*NEPWED
Trigger: GTCCTCCCAGGGTTCATTGCAACACCCATGACACAG...TATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTCAGATGCCAAGAATaGGACCACATCTGCCACATC +
Preference number: 4 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPFRCQE*DHICHI
Trigger: GATGTGGCAGATGTGGTCGCATTCTTGGCATCTGAA...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTGGTCACAAGCACCCCTaGTTCCCATATTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLGHKHP*FPYSAF
Trigger: GAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACC...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp TCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCGGTCACAAGCACCCCTaGTTCCCATATTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: SQAPLLPIFSIPEPYTATGHKHP*FPYSAF
Trigger: GAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACC...GGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp CCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACAGCAGAAACTCATCCTaGGTGATGCCCGCACAGGAC +
Preference number: 4 (lower is better)
Translates to: PYSAFLNHTLPPLLYPGNSRNSS*VMPAQD
Trigger: GTCCTGTGCGGGCATCACCCAGGATGAGTTTCTGCT...GTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp CCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTCATGGGTGTTGCAATaGACCCTGGGAGGACAGAGT +
Preference number: 4 (lower is better)
Translates to: PYSAFLNHTLPPLLYPGNSWVLQ*TLGGQS
Trigger: ACTCTGTCCTCCCAGGGTTCATTGCAACACCCATGA...GTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp CCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATTCCAGTGACTTCCACTaGGGTCCCTGTGATGTATCC +
Preference number: 4 (lower is better)
Translates to: PCFPYSAFLNHTLPPLLYSSDFH*GPCDVS
Trigger: GGATACATCACAGGGACCTCAGTGGAAGTCACTGGA...ATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTAGAGTCCAGGGTCCTTaGGGCAGTTACATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLRVQGP*GSYMKR
Trigger: TCTTTTCATGTAACTGCCTCAAGGACCCTGGACTCT...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp TCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCTCATCCTCAGACATGTaGAGCAGAAACTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: SQAPLLPIFSIPEPYTATSSSDM*SRNSSW
Trigger: CCAGGATGAGTTTCTGCTGCACATGTCTGAGGATGA...GGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCAGAATGCGACCACATCTaGCACATCCTCAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPECDHI*HILRVP
Trigger: GGGGACCCTGAGGATGTGGCAGATGTGGTCGCATTC...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp GACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTCAGACACGTCAGCCTaGAAGGCAGCATGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: DLEFIRVTSTPASHIQHSSDTSA*KAAWFP
Trigger: AGGGAACCATGCTGCCTTCCAGGCTGACGTGTCTGA...GGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp GACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCCACAACGACAGATGGTaGGCGAGAAAAGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: DLEFIRVTSTPASHIQHSHNDRW*ARKAGL
Trigger: CAGGCCTGCTTTTCTCGCCCACCATCTGTCGTTGTG...GGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp GACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCAGCAGAAACTCATCCTaGGTGATGCCCGCACAGGAC +
Preference number: 4 (lower is better)
Translates to: DLEFIRVTSTPASHIQHSSRNSS*VMPAQD
Trigger: GTCCTGTGCGGGCATCACCCAGGATGAGTTTCTGCT...GGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp GAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGAGCAGAAACTCATCCTaGGTGATGCCCGCACAGGAC +
Preference number: 4 (lower is better)
Translates to: EEDLEFIRVTSTPASHIQSRNSS*VMPAQD
Trigger: GTCCTGTGCGGGCATCACCCAGGATGAGTTTCTGCT...CTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTGAAACTCATCCTGGGTaGTGCCCGCACAGGACACAA +
Preference number: 4 (lower is better)
Translates to: IFSIPEPYTATPFVSWELETHPG*CPHRTQ
Trigger: TTGTGTCCTGTGCGGGCATCACCCAGGATGAGTTTC...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp GACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTCATGGGTGTTGCAATaGACCCTGGGAGGACAGAGT +
Preference number: 4 (lower is better)
Translates to: DLEFIRVTSTPASHIQHSSWVLQ*TLGGQS
Trigger: ACTCTGTCCTCCCAGGGTTCATTGCAACACCCATGA...GGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp GAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGTCCAGTGACTTCCACTaGGGTCCCTGTGATGTATCC +
Preference number: 4 (lower is better)
Translates to: EEDLEFIRVTSTPASHIQSSDFH*GPCDVS
Trigger: GGATACATCACAGGGACCTCAGTGGAAGTCACTGGA...CTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp GCAGGGAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATAAGAGTCCAGGGTCCTTaGGGCAGTTACATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: AGKRTWNLLGSQAPLLPIRVQGP*GSYMKR
Trigger: TCTTTTCATGTAACTGCCTCAAGGACCCTGGACTCT...TATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp CCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACCATATTCAGCATTCCTaGACCATACACTGCCACCCC +
Preference number: 4 (lower is better)
Translates to: PYSAFLNHTLPPLLYPGNHIQHS*TIHCHP
Trigger: GGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATG...GTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp GACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTCCAGCCTTGGATGCTaGATAGTTTGTCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: DLEFIRVTSTPASHIQHSSSLGC*IVCLPH
Trigger: GTGGGGCAGACAAACTATGCAGCATCCAAGGCTGGA...GGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATCAGACACGTCAGCCTaGAAGGCAGCATGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPSDTSA*KAAWFP
Trigger: AGGGAACCATGCTGCCTTCCAGGCTGACGTGTCTGA...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCACACAACGACAGATGGTaGGCGAGAAAAGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPHNDRW*ARKAGL
Trigger: CAGGCCTGCTTTTCTCGCCCACCATCTGTCGTTGTG...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp TGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAAAGCAGAAACTCATCCTaGGTGATGCCCGCACAGGAC +
Preference number: 4 (lower is better)
Translates to: WNLLGSQAPLLPIFSIPESRNSS*VMPAQD
Trigger: GTCCTGTGCGGGCATCACCCAGGATGAGTTTCTGCT...TTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp GGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCGCAGGGAAGAGGACTTaGAATTTATTAGGGTCACAA +
Preference number: 4 (lower is better)
Translates to: GSQAPLLPIFSIPEPYTAAGKRT*NLLGSQ
Trigger: TTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC...GGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTGCAGGGAAGAGGACTTaGAATTTATTAGGGTCACAA +
Preference number: 4 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPAGKRT*NLLGSQ
Trigger: TTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATCATGGGTGTTGCAATaGACCCTGGGAGGACAGAGT +
Preference number: 4 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPSWVLQ*TLGGQS
Trigger: ACTCTGTCCTCCCAGGGTTCATTGCAACACCCATGA...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTTCCAGTGACTTCCACTaGGGTCCCTGTGATGTATCC +
Preference number: 4 (lower is better)
Translates to: IFSIPEPYTATPFVSWELSSDFH*GPCDVS
Trigger: GGATACATCACAGGGACCTCAGTGGAAGTCACTGGA...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp CCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATAGAGTCCAGGGTCCTTaGGGCAGTTACATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: PCFPYSAFLNHTLPPLLYRVQGP*GSYMKR
Trigger: TCTTTTCATGTAACTGCCTCAAGGACCCTGGACTCT...ATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp CCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACAGAGTCCAGGGTCCTTaGGGCAGTTACATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: PYSAFLNHTLPPLLYPGNRVQGP*GSYMKR
Trigger: TCTTTTCATGTAACTGCCTCAAGGACCCTGGACTCT...GTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp GACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCCATATTCAGCATTCCTaGACCATACACTGCCACCCC +
Preference number: 4 (lower is better)
Translates to: DLEFIRVTSTPASHIQHSHIQHS*TIHCHP
Trigger: GGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATG...GGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp CCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATTCATCCTCAGACATGTaGAGCAGAAACTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: PCFPYSAFLNHTLPPLLYSSSDM*SRNSSW
Trigger: CCAGGATGAGTTTCTGCTGCACATGTCTGAGGATGA...ATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTTCCAGCCTTGGATGCTaGATAGTTTGTCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: IFSIPEPYTATPFVSWELSSLGC*IVCLPH
Trigger: GTGGGGCAGACAAACTATGCAGCATCCAAGGCTGGA...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTCTGTGTCATGGGTGTTaGAATGAACCCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: IFSIPEPYTATPFVSWELLCHGC*NEPWED
Trigger: GTCCTCCCAGGGTTCATTGCAACACCCATGACACAG...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp TGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACTGTGTCATGGGTGTTaGAATGAACCCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: WNLLGSQAPLLPIFSIPELCHGC*NEPWED
Trigger: GTCCTCCCAGGGTTCATTGCAACACCCATGACACAG...TTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCACTGTGTCATGGGTGTTaGAATGAACCCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPLCHGC*NEPWED
Trigger: GTCCTCCCAGGGTTCATTGCAACACCCATGACACAG...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp GCAGGGAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATCCACTATCTTCAGATaGCAAGAATGCGACCACATC +
Preference number: 4 (lower is better)
Translates to: AGKRTWNLLGSQAPLLPISTIFR*QECDHI
Trigger: GATGTGGTCGCATTCTTGGCATCTGAAGATAGTGGA...TATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp GAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGGGTCACAAGCACCCCTaGTTCCCATATTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: EEDLEFIRVTSTPASHIQGHKHP*FPYSAF
Trigger: GAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACC...CTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp GCAGGGAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATACAATCACTCCAGCCTTaGATGCTGCATAGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: AGKRTWNLLGSQAPLLPIQSLQP*MLHSLS
Trigger: AGACAAACTATGCAGCATCCAAGGCTGGAGTGATTG...TATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTGCAGGGAAGAGGACTTaGAATTTATTAGGGTCACAA +
Preference number: 4 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLAGKRT*NLLGSQ
Trigger: TTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp TCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCGCAGGGAAGAGGACTTaGAATTTATTAGGGTCACAA +
Preference number: 4 (lower is better)
Translates to: SQAPLLPIFSIPEPYTATAGKRT*NLLGSQ
Trigger: TTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC...GGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp GACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCAGAGTCCAGGGTCCTTaGGGCAGTTACATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: DLEFIRVTSTPASHIQHSRVQGP*GSYMKR
Trigger: TCTTTTCATGTAACTGCCTCAAGGACCCTGGACTCT...GGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCACATATTCAGCATTCCTaGACCATACACTGCCACCCC +
Preference number: 4 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPHIQHS*TIHCHP
Trigger: GGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATG...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp TGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACATATTCAGCATTCCTaGACCATACACTGCCACCCC +
Preference number: 4 (lower is better)
Translates to: WNLLGSQAPLLPIFSIPEHIQHS*TIHCHP
Trigger: GGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATG...TTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp GAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGTTCAGATGCCAAGAATaGGACCACATCTGCCACATC +
Preference number: 4 (lower is better)
Translates to: EEDLEFIRVTSTPASHIQFRCQE*DHICHI
Trigger: GATGTGGCAGATGTGGTCGCATTCTTGGCATCTGAA...CTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp CCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATTCCACTATCTTCAGATaGCAAGAATGCGACCACATC +
Preference number: 4 (lower is better)
Translates to: PCFPYSAFLNHTLPPLLYSTIFR*QECDHI
Trigger: GATGTGGTCGCATTCTTGGCATCTGAAGATAGTGGA...ATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTGGTCACAAGCACCCCTaGTTCCCATATTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: IFSIPEPYTATPFVSWELGHKHP*FPYSAF
Trigger: GAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACC...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp CCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCAATCACTCCAGCCTTaGATGCTGCATAGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: PCFPYSAFLNHTLPPLLYQSLQP*MLHSLS
Trigger: AGACAAACTATGCAGCATCCAAGGCTGGAGTGATTG...ATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
3UTR CAA 72 bp TATTCAGCATTCCTGAACCATACACTGCCACCCCTTTaGTATCCTGGGAACTTAGAGTCCTCATCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: YSAFLNHTLPPL*YPGNLESSSAG
Trigger: TCCTGCTGATGAGGACTCTAAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR TCA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCAAGAGTCCAGGGTCCTTaGGGCAGTTACATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPRVQGP*GSYMKR
Trigger: TCTTTTCATGTAACTGCCTCAAGGACCCTGGACTCT...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp TGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAATCATCCTCAGACATGTaGAGCAGAAACTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: WNLLGSQAPLLPIFSIPESSSDM*SRNSSW
Trigger: CCAGGATGAGTTTCTGCTGCACATGTCTGAGGATGA...TTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATCATCCTCAGACATGTaGAGCAGAAACTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPSSSDM*SRNSSW
Trigger: CCAGGATGAGTTTCTGCTGCACATGTCTGAGGATGA...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTTCATCCTCAGACATGTaGAGCAGAAACTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: IFSIPEPYTATPFVSWELSSSDM*SRNSSW
Trigger: CCAGGATGAGTTTCTGCTGCACATGTCTGAGGATGA...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTTTCAGATGCCAAGAATaGGACCACATCTGCCACATC +
Preference number: 4 (lower is better)
Translates to: IFSIPEPYTATPFVSWELFRCQE*DHICHI
Trigger: GATGTGGCAGATGTGGTCGCATTCTTGGCATCTGAA...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp TGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAATTCAGATGCCAAGAATaGGACCACATCTGCCACATC +
Preference number: 4 (lower is better)
Translates to: WNLLGSQAPLLPIFSIPEFRCQE*DHICHI
Trigger: GATGTGGCAGATGTGGTCGCATTCTTGGCATCTGAA...TTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp GAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCAATCACTCCAGCCTTaGATGCTGCATAGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: EEDLEFIRVTSTPASHIQQSLQP*MLHSLS
Trigger: AGACAAACTATGCAGCATCCAAGGCTGGAGTGATTG...CTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp CCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACGCAGGGAAGAGGACTTaGAATTTATTAGGGTCACAA +
Preference number: 4 (lower is better)
Translates to: PYSAFLNHTLPPLLYPGNAGKRT*NLLGSQ
Trigger: TTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC...GTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp TGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAATCCACTATCTTCAGATaGCAAGAATGCGACCACATC +
Preference number: 4 (lower is better)
Translates to: WNLLGSQAPLLPIFSIPESTIFR*QECDHI
Trigger: GATGTGGTCGCATTCTTGGCATCTGAAGATAGTGGA...TTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR GCA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTTCCACTATCTTCAGATaGCAAGAATGCGACCACATC +
Preference number: 4 (lower is better)
Translates to: IFSIPEPYTATPFVSWELSTIFR*QECDHI
Trigger: GATGTGGTCGCATTCTTGGCATCTGAAGATAGTGGA...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTCAATCACTCCAGCCTTaGATGCTGCATAGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: IFSIPEPYTATPFVSWELQSLQP*MLHSLS
Trigger: AGACAAACTATGCAGCATCCAAGGCTGGAGTGATTG...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCACAATCACTCCAGCCTTaGATGCTGCATAGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPQSLQP*MLHSLS
Trigger: AGACAAACTATGCAGCATCCAAGGCTGGAGTGATTG...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CCA 90 bp TGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAAGCAGGGAAGAGGACTTaGAATTTATTAGGGTCACAA +
Preference number: 4 (lower is better)
Translates to: WNLLGSQAPLLPIFSIPEAGKRT*NLLGSQ
Trigger: TTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC...TTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS GCA 90 bp CTTGCTCCCTGGCCCGCCCAGCAGCCGCACCGTCTCCTGTGCCGCTaGCCGGTCCAGGTCGCAGGCAGCTACGGTGGCCCCCTCTCCGGC +
Preference number: 5 (lower is better)
Translates to: LAPWPAQQPHRLLCR*PVQVAGSYGGPLSG
Trigger: GCCGGAGAGGGGGCCACCGTAGCTGCCTGCGACCTGGACCGGGCAGCGGCACAGGAGACGGTGCGGCTGCTGGGCGGGCCAGGGAGCAAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS GCA 90 bp CCCCTCCTTGCTCCCTGGCCCGCCCAGCAGCCGCACCGTCTCCTGTaGCGCTGCCCGGTCCAGGTCGCAGGCAGCTACGGTGGCCCCCTC +
Preference number: 5 (lower is better)
Translates to: PLLAPWPAQQPHRLL*RCPVQVAGSYGGPL
Trigger: GAGGGGGCCACCGTAGCTGCCTGCGACCTGGACCGGGCAGCGGCACAGGAGACGGTGCGGCTGCTGGGCGGGCCAGGGAGCAAGGAGGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS GCA 90 bp CGTCAGCCTGGAAGGCAGCATGGTTCCCTCGGGGCGGCCCCTCCTTaGTCCCTGGCCCGCCCAGCAGCCGCACCGTCTCCTGTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: RQPGRQHGSLGAAPP*SLARPAAAPSPVPL
Trigger: CAGCGGCACAGGAGACGGTGCGGCTGCTGGGCGGGCCAGGGAGCAAGGAGGGGCCGCCCCGAGGGAACCATGCTGCCTTCCAGGCTGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS TCA 90 bp GGCCAGGCGTACACTGACCGCTCGGCCGATGCCGCTCCCCGCACCTaGGGTAGGACAGAACACGCCGGACCGGGCACGGGGAGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: GQAYTDRSADAAPRT*GRTEHAGPGTGRRG
Trigger: CCCTCTCCTCCCCGTGCCCGGTCCGGCGTGTTCTGTCCTACCTCAGGTGCGGGGAGCGGCATCGGCCGAGCGGTCAGTGTACGCCTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS CCA 90 bp GAGAAAAGCAGGCCTGCACTTGTTCCAGCAGGCACCTGGCGGCCCTaGCCTCAGACACGTCAGCCTGGAAGGCAGCATGGTTCCCTCGGG +
Preference number: 5 (lower is better)
Translates to: EKSRPALVPAGTWRP*PQTRQPGRQHGSLG
Trigger: CCCGAGGGAACCATGCTGCCTTCCAGGCTGACGTGTCTGAGGCCAGGGCCGCCAGGTGCCTGCTGGAACAAGTGCAGGCCTGCTTTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS CCA 90 bp ATGGTGGGCGAGAAAAGCAGGCCTGCACTTGTTCCAGCAGGCACCTaGCGGCCCTGGCCTCAGACACGTCAGCCTGGAAGGCAGCATGGT +
Preference number: 5 (lower is better)
Translates to: MVGEKSRPALVPAGT*RPWPQTRQPGRQHG
Trigger: ACCATGCTGCCTTCCAGGCTGACGTGTCTGAGGCCAGGGCCGCCAGGTGCCTGCTGGAACAAGTGCAGGCCTGCTTTTCTCGCCCACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS CCA 90 bp GAGGAGAGGGCAGGGATCAGAGGTCACAGGGCAGAAAGTAAAATGTaGGTAAGGGGCCAGAGGTCACAGCGGCCGCGCACTCCAAGGGCA +
Preference number: 5 (lower is better)
Translates to: EERAGIRGHRAESKM*VRGQRSQRPRTPRA
Trigger: TGCCCTTGGAGTGCGCGGCCGCTGTGACCTCTGGCCCCTTACCCACATTTTACTTTCTGCCCTGTGACCTCTGATCCCTGCCCTCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS GCA 90 bp CCGGGCTGCGGTCTGGGTCAGCCCAATCACTCCAGCCTTGGATGCTaGATAGTTTGTCTGCCCCACGTTCCCCACCTTTCCTACGATGCT +
Preference number: 5 (lower is better)
Translates to: PGCGLGQPNHSSLGC*IVCLPHVPHLSYDA
Trigger: AGCATCGTAGGAAAGGTGGGGAACGTGGGGCAGACAAACTATGCAGCATCCAAGGCTGGAGTGATTGGGCTGACCCAGACCGCAGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS GCA 90 bp CTCCCGGGCTGCGGTCTGGGTCAGCCCAATCACTCCAGCCTTGGATaGTGCATAGTTTGTCTGCCCCACGTTCCCCACCTTTCCTACGAT +
Preference number: 5 (lower is better)
Translates to: LPGCGLGQPNHSSLG*CIVCLPHVPHLSYD
Trigger: ATCGTAGGAAAGGTGGGGAACGTGGGGCAGACAAACTATGCAGCATCCAAGGCTGGAGTGATTGGGCTGACCCAGACCGCAGCCCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS CCA 90 bp CAAGCTCCCGGGCTGCGGTCTGGGTCAGCCCAATCACTCCAGCCTTaGATGCTGCATAGTTTGTCTGCCCCACGTTCCCCACCTTTCCTA +
Preference number: 5 (lower is better)
Translates to: QAPGLRSGSAQSLQP*MLHSLSAPRSPPFL
Trigger: TAGGAAAGGTGGGGAACGTGGGGCAGACAAACTATGCAGCATCCAAGGCTGGAGTGATTGGGCTGACCCAGACCGCAGCCCGGGAGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS TCA 90 bp TGTCCCAGTCATCCTCAGACATGTGCAGCAGAAACTCATCCTGGGTaGTGCCCGCACAGGACACAACGACAGATGGTGGGCGAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: CPSHPQTCAAETHPG*CPHRTQRQMVGEKS
Trigger: GCTTTTCTCGCCCACCATCTGTCGTTGTGTCCTGTGCGGGCATCACCCAGGATGAGTTTCTGCTGCACATGTCTGAGGATGACTGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS-3UTR CAA 90 bp GGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCATTGGACACCAGGGCTaGTGCTGCAGCCTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: GSQAPLLPIFSIPEPYTAIGHQG*CCSLSD
Trigger: GTCACTCAGGCTGCAGCACAAGCCCTGGTGTCCAAT...GGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTATTGGACACCAGGGCTaGTGCTGCAGCCTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPIGHQG*CCSLSD
Trigger: GTCACTCAGGCTGCAGCACAAGCCCTGGTGTCCAAT...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS CCA 90 bp ACTTTGTCCCAGTCATCCTCAGACATGTGCAGCAGAAACTCATCCTaGGTGATGCCCGCACAGGACACAACGACAGATGGTGGGCGAGAA +
Preference number: 5 (lower is better)
Translates to: TLSQSSSDMCSRNSS*VMPAQDTTTDGGRE
Trigger: TTCTCGCCCACCATCTGTCGTTGTGTCCTGTGCGGGCATCACCCAGGATGAGTTTCTGCTGCACATGTCTGAGGATGACTGGGACAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS-3UTR CAA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTGAACCACGACAACCATaGGACACCAGGGCTTGTGCT +
Preference number: 5 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPEPRQP*DTRACA
Trigger: AGCACAAGCCCTGGTGTCCAATGGTTGTCGTGGTTC...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp GGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCTGGATGCTGCATAGTTaGTCTGCCCCACGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: GSQAPLLPIFSIPEPYTAWMLHS*SAPRSP
Trigger: TGGGGAACGTGGGGCAGACAAACTATGCAGCATCCA...GGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp TCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCTGGATGCTGCATAGTTaGTCTGCCCCACGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: SQAPLLPIFSIPEPYTATWMLHS*SAPRSP
Trigger: TGGGGAACGTGGGGCAGACAAACTATGCAGCATCCA...GGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS TCA 90 bp TGTCCACCACTTTCTGTGGCACTTTCTGTGTCATGGGTGTTGCAATaGACCCTGGGAGGACAGAGTTACAGCGGATCCCATGTCGTCCAA +
Preference number: 5 (lower is better)
Translates to: CPPLSVALSVSWVLQ*TLGGQSYSGSHVVQ
Trigger: TTGGACGACATGGGATCCGCTGTAACTCTGTCCTCCCAGGGTTCATTGCAACACCCATGACACAGAAAGTGCCACAGAAAGTGGTGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS GCA 90 bp TTGAGGTTGACAGCTATGACTTTGTCCCAGTCATCCTCAGACATGTaGAGCAGAAACTCATCCTGGGTGATGCCCGCACAGGACACAACG +
Preference number: 5 (lower is better)
Translates to: LRLTAMTLSQSSSDM*SRNSSWVMPAQDTT
Trigger: CGTTGTGTCCTGTGCGGGCATCACCCAGGATGAGTTTCTGCTGCACATGTCTGAGGATGACTGGGACAAAGTCATAGCTGTCAACCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS-3UTR CAA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTAAGGTGCCCTTGAGGTaGACAGCTATGACTTTGTCC +
Preference number: 5 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPKVPLR*TAMTLS
Trigger: GGACAAAGTCATAGCTGTCAACCTCAAGGGCACCTT...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp GGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCAAGGTGCCCTTGAGGTaGACAGCTATGACTTTGTCC +
Preference number: 5 (lower is better)
Translates to: GSQAPLLPIFSIPEPYTAKVPLR*TAMTLS
Trigger: GGACAAAGTCATAGCTGTCAACCTCAAGGGCACCTT...GGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTACTAGGAAGGTGCCCTaGAGGTTGACAGCTATGACT +
Preference number: 5 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPTRKVP*RLTAMT
Trigger: AGTCATAGCTGTCAACCTCAAGGGCACCTTCCTAGT...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp CCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACATTGGACACCAGGGCTaGTGCTGCAGCCTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: PYSAFLNHTLPPLLYPGNIGHQG*CCSLSD
Trigger: GTCACTCAGGCTGCAGCACAAGCCCTGGTGTCCAAT...GTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTCAGAGTCCAGGGTCCTaGAGGCAGTTACATGAAAAG +
Preference number: 5 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPQSPGS*RQLHEK
Trigger: CTTTTCATGTAACTGCCTCAAGGACCCTGGACTCTG...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS GCA 90 bp AATCTTGTCCACCACTTTCTGTGGCACTTTCTGTGTCATGGGTGTTaGAATGAACCCTGGGAGGACAGAGTTACAGCGGATCCCATGTCG +
Preference number: 5 (lower is better)
Translates to: NLVHHFLWHFLCHGC*NEPWEDRVTADPMS
Trigger: CGACATGGGATCCGCTGTAACTCTGTCCTCCCAGGGTTCATTGCAACACCCATGACACAGAAAGTGCCACAGAAAGTGGTGGACAAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS-3UTR CAA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTACTAGGAAGGTGCCCTaGAGGTTGACAGCTATGACT +
Preference number: 5 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLTRKVP*RLTAMT
Trigger: AGTCATAGCTGTCAACCTCAAGGGCACCTTCCTAGT...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp TCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCACTAGGAAGGTGCCCTaGAGGTTGACAGCTATGACT +
Preference number: 5 (lower is better)
Translates to: SQAPLLPIFSIPEPYTATTRKVP*RLTAMT
Trigger: AGTCATAGCTGTCAACCTCAAGGGCACCTTCCTAGT...GGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp GACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCATTGGACACCAGGGCTaGTGCTGCAGCCTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: DLEFIRVTSTPASHIQHSIGHQG*CCSLSD
Trigger: GTCACTCAGGCTGCAGCACAAGCCCTGGTGTCCAAT...GGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp CCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACGAACCACGACAACCATaGGACACCAGGGCTTGTGCT +
Preference number: 5 (lower is better)
Translates to: PYSAFLNHTLPPLLYPGNEPRQP*DTRACA
Trigger: AGCACAAGCCCTGGTGTCCAATGGTTGTCGTGGTTC...GTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTCAGAGTCCAGGGTCCTaGAGGCAGTTACATGAAAAG +
Preference number: 5 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLQSPGS*RQLHEK
Trigger: CTTTTCATGTAACTGCCTCAAGGACCCTGGACTCTG...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTACACTGCCACCCCTTTaGTATCCTGGGAACTTAGAG +
Preference number: 5 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLTLPPL*YPGNLE
Trigger: CTCTAAGTTCCCAGGATACAAAAGGGGTGGCAGTGT...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp CAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTGGCAGGGAAGAGGACTaGGAATTTATTAGGGTCACA +
Preference number: 5 (lower is better)
Translates to: QAPLLPIFSIPEPYTATPGREED*EFIRVT
Trigger: TGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGCC...AGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp GCAGGGAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATAACTAGGAAGGTGCCCTaGAGGTTGACAGCTATGACT +
Preference number: 5 (lower is better)
Translates to: AGKRTWNLLGSQAPLLPITRKVP*RLTAMT
Trigger: AGTCATAGCTGTCAACCTCAAGGGCACCTTCCTAGT...TATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCAATTGGACACCAGGGCTaGTGCTGCAGCCTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPIGHQG*CCSLSD
Trigger: GTCACTCAGGCTGCAGCACAAGCCCTGGTGTCCAAT...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTATTGGACACCAGGGCTaGTGCTGCAGCCTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: IFSIPEPYTATPFVSWELIGHQG*CCSLSD
Trigger: GTCACTCAGGCTGCAGCACAAGCCCTGGTGTCCAAT...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp GAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGGAACCACGACAACCATaGGACACCAGGGCTTGTGCT +
Preference number: 5 (lower is better)
Translates to: EEDLEFIRVTSTPASHIQEPRQP*DTRACA
Trigger: AGCACAAGCCCTGGTGTCCAATGGTTGTCGTGGTTC...CTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp GGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACGATGCTACTGATGTaGATGATGGAACCACGACAA +
Preference number: 5 (lower is better)
Translates to: GSQAPLLPIFSIPEPYTATMLLM*MMEPRQ
Trigger: TTGTCGTGGTTCCATCATCAACATCAGTAGCATCGT...GGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp GAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGTGGATGCTGCATAGTTaGTCTGCCCCACGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: EEDLEFIRVTSTPASHIQWMLHS*SAPRSP
Trigger: TGGGGAACGTGGGGCAGACAAACTATGCAGCATCCA...CTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp GCAGGGAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATAACACTGCCACCCCTTTaGTATCCTGGGAACTTAGAG +
Preference number: 5 (lower is better)
Translates to: AGKRTWNLLGSQAPLLPITLPPL*YPGNLE
Trigger: CTCTAAGTTCCCAGGATACAAAAGGGGTGGCAGTGT...TATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp TCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCGGCAGGGAAGAGGACTaGGAATTTATTAGGGTCACA +
Preference number: 5 (lower is better)
Translates to: SQAPLLPIFSIPEPYTATGREED*EFIRVT
Trigger: TGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGCC...GGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp AAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTGGCAGGGAAGAGGACTaGGAATTTATTAGGGTCACA +
Preference number: 5 (lower is better)
Translates to: KHPCFPYSAFLNHTLPPLGREED*EFIRVT
Trigger: TGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGCC...AAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp CCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACAAGGTGCCCTTGAGGTaGACAGCTATGACTTTGTCC +
Preference number: 5 (lower is better)
Translates to: PYSAFLNHTLPPLLYPGNKVPLR*TAMTLS
Trigger: GGACAAAGTCATAGCTGTCAACCTCAAGGGCACCTT...GTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCAGAACCACGACAACCATaGGACACCAGGGCTTGTGCT +
Preference number: 5 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPEPRQP*DTRACA
Trigger: AGCACAAGCCCTGGTGTCCAATGGTTGTCGTGGTTC...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp TCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCACGATGCTACTGATGTaGATGATGGAACCACGACAA +
Preference number: 5 (lower is better)
Translates to: SQAPLLPIFSIPEPYTATTMLLM*MMEPRQ
Trigger: TTGTCGTGGTTCCATCATCAACATCAGTAGCATCGT...GGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp TGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAATGGATGCTGCATAGTTaGTCTGCCCCACGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: WNLLGSQAPLLPIFSIPEWMLHS*SAPRSP
Trigger: TGGGGAACGTGGGGCAGACAAACTATGCAGCATCCA...TTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTTGGATGCTGCATAGTTaGTCTGCCCCACGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: IFSIPEPYTATPFVSWELWMLHS*SAPRSP
Trigger: TGGGGAACGTGGGGCAGACAAACTATGCAGCATCCA...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp CCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCAGAGTCCAGGGTCCTaGAGGCAGTTACATGAAAAG +
Preference number: 5 (lower is better)
Translates to: PCFPYSAFLNHTLPPLLYQSPGS*RQLHEK
Trigger: CTTTTCATGTAACTGCCTCAAGGACCCTGGACTCTG...ATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp CCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACACACTGCCACCCCTTTaGTATCCTGGGAACTTAGAG +
Preference number: 5 (lower is better)
Translates to: PYSAFLNHTLPPLLYPGNTLPPL*YPGNLE
Trigger: CTCTAAGTTCCCAGGATACAAAAGGGGTGGCAGTGT...GTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp GCAGGGAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATAGGCAGGGAAGAGGACTaGGAATTTATTAGGGTCACA +
Preference number: 5 (lower is better)
Translates to: AGKRTWNLLGSQAPLLPIGREED*EFIRVT
Trigger: TGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGCC...TATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp CCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTGACAGCTATGACTTaGTCCCAGTCATCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: PYSAFLNHTLPPLLYPGNLTAMT*SQSSSD
Trigger: GTCTGAGGATGACTGGGACAAAGTCATAGCTGTCAA...GTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp GACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTTGACAGCTATGACTTaGTCCCAGTCATCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: DLEFIRVTSTPASHIQHSLTAMT*SQSSSD
Trigger: GTCTGAGGATGACTGGGACAAAGTCATAGCTGTCAA...GGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTAAGGTGCCCTTGAGGTaGACAGCTATGACTTTGTCC +
Preference number: 5 (lower is better)
Translates to: IFSIPEPYTATPFVSWELKVPLR*TAMTLS
Trigger: GGACAAAGTCATAGCTGTCAACCTCAAGGGCACCTT...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCAAAGGTGCCCTTGAGGTaGACAGCTATGACTTTGTCC +
Preference number: 5 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPKVPLR*TAMTLS
Trigger: GGACAAAGTCATAGCTGTCAACCTCAAGGGCACCTT...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp CCCTGCTTCCCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATACGATGCTACTGATGTaGATGATGGAACCACGACAA +
Preference number: 5 (lower is better)
Translates to: PCFPYSAFLNHTLPPLLYTMLLM*MMEPRQ
Trigger: TTGTCGTGGTTCCATCATCAACATCAGTAGCATCGT...ATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGGGAAGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTCAGAGTCCAGGGTCCTaGAGGCAGTTACATGAAAAG +
Preference number: 5 (lower is better)
Translates to: IFSIPEPYTATPFVSWELQSPGS*RQLHEK
Trigger: CTTTTCATGTAACTGCCTCAAGGACCCTGGACTCTG...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTACACTGCCACCCCTTTaGTATCCTGGGAACTTAGAG +
Preference number: 5 (lower is better)
Translates to: IFSIPEPYTATPFVSWELTLPPL*YPGNLE
Trigger: CTCTAAGTTCCCAGGATACAAAAGGGGTGGCAGTGT...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp GAAGAGGACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGGGCAGGGAAGAGGACTaGGAATTTATTAGGGTCACA +
Preference number: 5 (lower is better)
Translates to: EEDLEFIRVTSTPASHIQGREED*EFIRVT
Trigger: TGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGCC...CTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTCCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCATTGACAGCTATGACTTaGTCCCAGTCATCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPLTAMT*SQSSSD
Trigger: GTCTGAGGATGACTGGGACAAAGTCATAGCTGTCAA...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp ATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACTTTTGACAGCTATGACTTaGTCCCAGTCATCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: IFSIPEPYTATPFVSWELLTAMT*SQSSSD
Trigger: GTCTGAGGATGACTGGGACAAAGTCATAGCTGTCAA...AAGTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp TGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAATTGACAGCTATGACTTaGTCCCAGTCATCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: WNLLGSQAPLLPIFSIPELTAMT*SQSSSD
Trigger: GTCTGAGGATGACTGGGACAAAGTCATAGCTGTCAA...TTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp GACTTGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCACGATGCTACTGATGTaGATGATGGAACCACGACAA +
Preference number: 5 (lower is better)
Translates to: DLEFIRVTSTPASHIQHSTMLLM*MMEPRQ
Trigger: TTGTCGTGGTTCCATCATCAACATCAGTAGCATCGT...GGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp CCATATTCAGCATTCCTGAACCATACACTGCCACCCCTTTTGTATCCTGGGAACATCATTTCAGTAATCTaGTCCACCACTTTCTGTGGC +
Preference number: 5 (lower is better)
Translates to: PYSAFLNHTLPPLLYPGNIISVI*STTFCG
Trigger: GCCACAGAAAGTGGTGGACAAGATTACTGAAATGAT...GTTCCCAGGATACAAAAGGGGTGGCAGTGTATGGTTCAGGAATGCTGAATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp TGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAAGGCAGGGAAGAGGACTaGGAATTTATTAGGGTCACA +
Preference number: 5 (lower is better)
Translates to: WNLLGSQAPLLPIFSIPEGREED*EFIRVT
Trigger: TGTGACCCTAATAAATTCCAAGTCCTCTTCCCTGCC...TTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp TGGAATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAAATCATTTCAGTAATCTaGTCCACCACTTTCTGTGGC +
Preference number: 5 (lower is better)
Translates to: WNLLGSQAPLLPIFSIPEIISVI*STTFCG
Trigger: GCCACAGAAAGTGGTGGACAAGATTACTGAAATGAT...TTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS-3UTR CAA 90 bp AATTTATTAGGGTCACAAGCACCCCTGCTTCCCATATTCAGCATTCCTGAACCAATCATTTCAGTAATCTaGTCCACCACTTTCTGTGGC +
Preference number: 5 (lower is better)
Translates to: NLLGSQAPLLPIFSIPEPIISVI*STTFCG
Trigger: GCCACAGAAAGTGGTGGACAAGATTACTGAAATGAT...TGGTTCAGGAATGCTGAATATGGGAAGCAGGGGTGCTTGTGACCCTAATAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS GCA 72 bp TGGCCCGCCCAGCAGCCGCACCGTCTCCTGTGCCGCTaGCCGGTCCAGGTCGCAGGCAGCTACGGTGGCCCC +
Preference number: 6 (lower is better)
Translates to: WPAQQPHRLLCR*PVQVAGSYGGP
Trigger: GGGGCCACCGTAGCTGCCTGCGACCTGGACCGGGCAGCGGCACAGGAGACGGTGCGGCTGCTGGGCGGGCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS TCA 72 bp CAGCTACGGTGGCCCCCTCTCCGGCCAGGCGTACACTaGCCGCTCGGCCGATGCCGCTCCCCGCACCTGAGG +
Preference number: 6 (lower is better)
Translates to: QLRWPPLRPGVH*PLGRCRSPHLR
Trigger: CCTCAGGTGCGGGGAGCGGCATCGGCCGAGCGGTCAGTGTACGCCTGGCCGGAGAGGGGGCCACCGTAGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS CAA 90 bp ACGTCAGCCTGGAAGGCAGCATGGTTCCCTCGGGGCGGCCCCTCCTaGCTCCCTGGCCCGCCCAGCAGCCGCACCGTCTCCTGTGCCGCT +
Preference number: 6 (lower is better)
Translates to: TSAWKAAWFPRGGPS*LPGPPSSRTVSCAA
Trigger: AGCGGCACAGGAGACGGTGCGGCTGCTGGGCGGGCCAGGGAGCAAGGAGGGGCCGCCCCGAGGGAACCATGCTGCCTTCCAGGCTGACGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS GCA 72 bp GCCGATGCCGCTCCCCGCACCTGTGACCAAGGCCAGTaGGGAGCGGAGTCGGTTCTGGAGCTGAGACGCCAT +
Preference number: 6 (lower is better)
Translates to: ADAAPRTCDQGQ*GAESVLELRRH
Trigger: ATGGCGTCTCAGCTCCAGAACCGACTCCGCTCCGCACTGGCCTTGGTCACAGGTGCGGGGAGCGGCATCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
CDS CCA 72 bp AGGCCTGCACTTGTTCCAGCAGGCACCTGGCGGCCCTaGCCTCAGACACGTCAGCCTGGAAGGCAGCATGGT +
Preference number: 6 (lower is better)
Translates to: RPALVPAGTWRP*PQTRQPGRQHG
Trigger: ACCATGCTGCCTTCCAGGCTGACGTGTCTGAGGCCAGGGCCGCCAGGTGCCTGCTGGAACAAGTGCAGGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS CCA 72 bp GAGAAAAGCAGGCCTGCACTTGTTCCAGCAGGCACCTaGCGGCCCTGGCCTCAGACACGTCAGCCTGGAAGG +
Preference number: 6 (lower is better)
Translates to: EKSRPALVPAGT*RPWPQTRQPGR
Trigger: CCTTCCAGGCTGACGTGTCTGAGGCCAGGGCCGCCAGGTGCCTGCTGGAACAAGTGCAGGCCTGCTTTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS CCA 72 bp CGGATCCCATGTCGTCCAAGCTCCCGGGCTGCGGTCTaGGTCAGCCCAATCACTCCAGCCTTGGATGCTGCA +
Preference number: 6 (lower is better)
Translates to: RIPCRPSSRAAV*VSPITPALDAA
Trigger: TGCAGCATCCAAGGCTGGAGTGATTGGGCTGACCCAGACCGCAGCCCGGGAGCTTGGACGACATGGGATCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS GCA 72 bp GTTACAGCGGATCCCATGTCGTCCAAGCTCCCGGGCTaGGGTCTGGGTCAGCCCAATCACTCCAGCCTTGGA +
Preference number: 6 (lower is better)
Translates to: VTADPMSSKLPG*GLGQPNHSSLG
Trigger: TCCAAGGCTGGAGTGATTGGGCTGACCCAGACCGCAGCCCGGGAGCTTGGACGACATGGGATCCGCTGTAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS CCA 72 bp GGGCTGCGGTCTGGGTCAGCCCAATCACTCCAGCCTTaGATGCTGCATAGTTTGTCTGCCCCACGTTCCCCA +
Preference number: 6 (lower is better)
Translates to: GLRSGSAQSLQP*MLHSLSAPRSP
Trigger: TGGGGAACGTGGGGCAGACAAACTATGCAGCATCCAAGGCTGGAGTGATTGGGCTGACCCAGACCGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS CCA 72 bp CTGGGTGATGCCCGCACAGGACACAACGACAGATGGTaGGCGAGAAAAGCAGGCCTGCACTTGTTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: LGDARTGHNDRW*ARKAGLHLFQQ
Trigger: CTGCTGGAACAAGTGCAGGCCTGCTTTTCTCGCCCACCATCTGTCGTTGTGTCCTGTGCGGGCATCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS CCA 72 bp GCAGGGATCAGAGGTCACAGGGCAGAAAGTAAAATGTaGGTAAGGGGCCAGAGGTCACAGCGGCCGCGCACT +
Preference number: 6 (lower is better)
Translates to: AGIRGHRAESKM*VRGQRSQRPRT
Trigger: AGTGCGCGGCCGCTGTGACCTCTGGCCCCTTACCCACATTTTACTTTCTGCCCTGTGACCTCTGATCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS GCA 72 bp GGTCTGGGTCAGCCCAATCACTCCAGCCTTGGATGCTaGATAGTTTGTCTGCCCCACGTTCCCCACCTTTCC +
Preference number: 6 (lower is better)
Translates to: GLGQPNHSSLGC*IVCLPHVPHLS
Trigger: GGAAAGGTGGGGAACGTGGGGCAGACAAACTATGCAGCATCCAAGGCTGGAGTGATTGGGCTGACCCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS GCA 72 bp TGCGGTCTGGGTCAGCCCAATCACTCCAGCCTTGGATaGTGCATAGTTTGTCTGCCCCACGTTCCCCACCTT +
Preference number: 6 (lower is better)
Translates to: CGLGQPNHSSLG*CIVCLPHVPHL
Trigger: AAGGTGGGGAACGTGGGGCAGACAAACTATGCAGCATCCAAGGCTGGAGTGATTGGGCTGACCCAGACCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS TCA 72 bp CATCCTCAGACATGTGCAGCAGAAACTCATCCTGGGTaGTGCCCGCACAGGACACAACGACAGATGGTGGGC +
Preference number: 6 (lower is better)
Translates to: HPQTCAAETHPG*CPHRTQRQMVG
Trigger: GCCCACCATCTGTCGTTGTGTCCTGTGCGGGCATCACCCAGGATGAGTTTCTGCTGCACATGTCTGAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS TCA 72 bp CGACAACCATTGGACACCAGGGCTTGTGCTGCAGCCTaGGTGACTAGGAAGGTGCCCTTGAGGTTGACAGCT +
Preference number: 6 (lower is better)
Translates to: RQPLDTRACAAA*VTRKVPLRLTA
Trigger: AGCTGTCAACCTCAAGGGCACCTTCCTAGTCACTCAGGCTGCAGCACAAGCCCTGGTGTCCAATGGTTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS CAA 72 bp TCAGCCCAATCACTCCAGCCTTGGATGCTGCATAGTTaGTCTGCCCCACGTTCCCCACCTTTCCTACGATGC +
Preference number: 6 (lower is better)
Translates to: SAQSLQPWMLHS*SAPRSPPFLRC
Trigger: GCATCGTAGGAAAGGTGGGGAACGTGGGGCAGACAAACTATGCAGCATCCAAGGCTGGAGTGATTGGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS GCA 72 bp ACAGCTATGACTTTGTCCCAGTCATCCTCAGACATGTaGAGCAGAAACTCATCCTGGGTGATGCCCGCACAG +
Preference number: 6 (lower is better)
Translates to: TAMTLSQSSSDM*SRNSSWVMPAQ
Trigger: CTGTGCGGGCATCACCCAGGATGAGTTTCTGCTGCACATGTCTGAGGATGACTGGGACAAAGTCATAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS CAA 72 bp CCCACGTTCCCCACCTTTCCTACGATGCTACTGATGTaGATGATGGAACCACGACAACCATTGGACACCAGG +
Preference number: 6 (lower is better)
Translates to: PTFPTFPTMLLM*MMEPRQPLDTR
Trigger: CCTGGTGTCCAATGGTTGTCGTGGTTCCATCATCAACATCAGTAGCATCGTAGGAAAGGTGGGGAACGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS GCA 72 bp CACCACTTTCTGTGGCACTTTCTGTGTCATGGGTGTTaGAATGAACCCTGGGAGGACAGAGTTACAGCGGAT +
Preference number: 6 (lower is better)
Translates to: HHFLWHFLCHGC*NEPWEDRVTAD
Trigger: ATCCGCTGTAACTCTGTCCTCCCAGGGTTCATTGCAACACCCATGACACAGAAAGTGCCACAGAAAGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2
ENST00000461067.1
ENST00000469186.1
ENST00000476285.1
ENST00000480183.1
ENST00000481255.1
ENST00000490492.1
CDS TCA 72 bp AGGCAGTTACATGAAAAGACCTCCAGTGACTTCCACTaGGGTCCCTGTGATGTATCCACTATCTTCAGATGC +
Preference number: 6 (lower is better)
Translates to: RQLHEKTSSDFH*GPCDVSTIFRC
Trigger: GCATCTGAAGATAGTGGATACATCACAGGGACCTCAGTGGAAGTCACTGGAGGTCTTTTCATGTAACTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230236.4
ENST00000374662.4
ENST00000414463.2
ENST00000422433.2
ENST00000427295.2
ENST00000454191.2