Pregenerated sensors for HSD17B1 (Homo sapiens)
Ensembl gene IDs: ENSG00000108786Ensembl transcript IDs: ENST00000225929.5, ENST00000585807.6, ENST00000590299.5, ENST00000593215.1
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TCAGGGTTCTGCGCCGCCTCGCGAAAGACTTGCTTGCTGTGGGCGAGGTATTGGAGGTGTGGATGTCCGTaGGGTCCAGCACCTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: SGFCAASRKTCLLWARYWRCGCP*GPAPPL Trigger: CAGAGGAGGTGCTGGACCGCACGGACATCCACACCT...CCAATACCTCGCCCACAGCAAGCAAGTCTTTCGCGAGGCGGCGCAGAACCCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590299.5 |
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| 3UTR-3UTR GCA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTTTAGCCACCCACAGCTaGTACCGCCGCCCCATCCCC | + |
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Preference number: 2 (lower is better) Translates to: RQPSRLAALVKLANAIYLLATHS*YRRPIP Trigger: GGGGATGGGGCGGCGGTAGCAGCTGTGGGTGGCTAA...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000225929.5 ENST00000585807.6 ENST00000590299.5 |
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| 3UTR-3UTR CAA 90 bp | CGCCGAGCTCAGGGTCCCCCACCGCACCGCGCCCGGCCTCGTCCTCTGCCCCAGCCCCAGCCTCGGCCTTaGCCGGAACGTCGCCGAACA | + |
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Preference number: 3 (lower is better) Translates to: RRAQGPPPHRARPRPLPQPQPRP*PERRRT Trigger: TGTTCGGCGACGTTCCGGCAAAGGCCGAGGCTGGGG...CTGGGGCAGAGGACGAGGCCGGGCGCGGTGCGGTGGGGGACCCTGAGCTCGGCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000590299.5 |
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| 3UTR GCA 72 bp | CCTCAGGGTTCTGCGCCGCCTCGCGAAAGACTTGCTTaGTGTGGGCGAGGTATTGGTAGAAGCGGTGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: PQGSAPPRERLA*CGRGIGRSGGR Trigger: CCTTCCACCGCTTCTACCAATACCTCGCCCACAGCAAGCAAGTCTTTCGCGAGGCGGCGCAGAACCCTGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590299.5 |
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| CDS-3UTR GCA 90 bp | CAGGGTTCTGCGCCGCCTCGCGAAAGACTTGCTTGCTGTGGGCGAGGTATTGGTCAGCAGGCCCAGGCCTaGGTTACACACCAGCACGTC | + |
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Preference number: 4 (lower is better) Translates to: QGSAPPRERLACCGRGIGQQAQA*VTHQHV Trigger: GACGTGCTGGTGTGTAACGCAGGCCTGGGCCTGCTG...ACCAATACCTCGCCCACAGCAAGCAAGTCTTTCGCGAGGCGGCGCAGAACCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590299.5 |
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| CDS-3UTR GCA 90 bp | TCTGCGCCGCCTCGCGAAAGACTTGCTTGCTGTGGGCGAGGTATTGGTAGAAGCTTAGCCACCCACAGCTaGTACCGCCGCCCCATCCCC | + |
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Preference number: 4 (lower is better) Translates to: SAPPRERLACCGRGIGRSLATHS*YRRPIP Trigger: GGGGATGGGGCGGCGGTAGCAGCTGTGGGTGGCTAA...GCTTCTACCAATACCTCGCCCACAGCAAGCAAGTCTTTCGCGAGGCGGCGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590299.5 |
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| CDS-3UTR TCA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTGGGCGCGCAAAGCGGTaGGGAAGACCTCCGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: RQPSRLAALVKLANAIYLGRAKR*GRPPPP Trigger: AGGTGGCGGAGGTCTTCCTCACCGCTTTGCGCGCCC...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000225929.5 ENST00000585807.6 ENST00000590299.5 |
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| CDS-3UTR TCA 90 bp | GACTTGCTTGCTGTGGGCGAGGTATTGGTAGAAGCGGTGGAAGGTGTGGATGTCGGGCGCGCAAAGCGGTaGGGAAGACCTCCGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: DLLAVGEVLVEAVEGVDVGRAKR*GRPPPP Trigger: AGGTGGCGGAGGTCTTCCTCACCGCTTTGCGCGCCC...GACATCCACACCTTCCACCGCTTCTACCAATACCTCGCCCACAGCAAGCAAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590299.5 |
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| CDS-3UTR GCA 90 bp | TCAGGGTTCTGCGCCGCCTCGCGAAAGACTTGCTTGCTGTGGGCGAGGTATTGGAGACGTACGGCCAAGTaGAGGCCGATGCCCGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SGFCAASRKTCLLWARYWRRTAK*RPMPEE Trigger: TTCCTCGGGCATCGGCCTGCACTTGGCCGTACGTCT...CCAATACCTCGCCCACAGCAAGCAAGTCTTTCGCGAGGCGGCGCAGAACCCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590299.5 |
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| CDS-3UTR TCA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTGCGGGAGACAGCGGCTaGGGAAGCCTTTACTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: RQPSRLAALVKLANAIYLAGDSG*GSLYCG Trigger: CCCGCAGTAAAGGCTTCCTCAGCCGCTGTCTCCCGC...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000225929.5 ENST00000585807.6 ENST00000590299.5 |
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| 3UTR CAA 72 bp | CGCCTCGCGAAAGACTTGCTTGCTGTGGGCGAGGTATaGGTAGAAGCGGTGGAAGGTGTGGATGTCCGTGCG | + |
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Preference number: 4 (lower is better) Translates to: RLAKDLLAVGEV*VEAVEGVDVRA Trigger: CGCACGGACATCCACACCTTCCACCGCTTCTACCAATACCTCGCCCACAGCAAGCAAGTCTTTCGCGAGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590299.5 |
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| CDS-3UTR TCA 90 bp | TCTGCGCCGCCTCGCGAAAGACTTGCTTGCTGTGGGCGAGGTATTGGTAGAAGCAGCGGCCACGGATTTTaGGTCCCTTACGTCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SAPPRERLACCGRGIGRSSGHGF*VPYVQL Trigger: CAGCTGGACGTAAGGGACTCAAAATCCGTGGCCGCT...GCTTCTACCAATACCTCGCCCACAGCAAGCAAGTCTTTCGCGAGGCGGCGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590299.5 |
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| CDS-3UTR GCA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTCAGCAGGCCCAGGCCTaGGTTACACACCAGCACGTC | + |
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Preference number: 4 (lower is better) Translates to: RQPSRLAALVKLANAIYLQQAQA*VTHQHV Trigger: GACGTGCTGGTGTGTAACGCAGGCCTGGGCCTGCTG...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000225929.5 ENST00000585807.6 ENST00000590299.5 |
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| CDS-3UTR GCA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTAGACGTACGGCCAAGTaGAGGCCGATGCCCGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: RQPSRLAALVKLANAIYLRRTAK*RPMPEE Trigger: TTCCTCGGGCATCGGCCTGCACTTGGCCGTACGTCT...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000225929.5 ENST00000585807.6 ENST00000590299.5 |
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| CDS-3UTR GCA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTAGGTGTGGATGTCCGTaGGGTCCAGCACCTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RQPSRLAALVKLANAIYLRCGCP*GPAPPL Trigger: CAGAGGAGGTGCTGGACCGCACGGACATCCACACCT...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000225929.5 ENST00000585807.6 ENST00000590299.5 |
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| CDS-3UTR GCA 90 bp | TCTGCGCCGCCTCGCGAAAGACTTGCTTGCTGTGGGCGAGGTATTGGTAGAAGCGCCTCGCGAAAGACTTaGTTGCTGTGGGCGAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: SAPPRERLACCGRGIGRSASRKT*LLWARY Trigger: ATACCTCGCCCACAGCAAGCAAGTCTTTCGCGAGGC...GCTTCTACCAATACCTCGCCCACAGCAAGCAAGTCTTTCGCGAGGCGGCGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590299.5 |
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| CDS-3UTR CCA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTAAGCGGTGGAAGGTGTaGATGTCCGTGCGGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RQPSRLAALVKLANAIYLKRWKV*MSVRSS Trigger: GCTGGACCGCACGGACATCCACACCTTCCACCGCTT...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000225929.5 ENST00000585807.6 ENST00000590299.5 |
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| CDS-3UTR TCA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTAGCGGCCACGGATTTTaGGTCCCTTACGTCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: RQPSRLAALVKLANAIYLSGHGF*VPYVQL Trigger: CAGCTGGACGTAAGGGACTCAAAATCCGTGGCCGCT...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000225929.5 ENST00000585807.6 ENST00000590299.5 |
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| CDS-3UTR CCA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTATCAGGCTCAAGCTGTaGACCCCAAAGGGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RQPSRLAALVKLANAIYLIRLKL*TPKGSS Trigger: GCTGCTGCCCTTTGGGGTCCACAGCTTGAGCCTGAT...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000225929.5 |
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| CDS-3UTR CCA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTCTGTGTTGCTCTGGCTaGTCTCCAACTCCGGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: RQPSRLAALVKLANAIYLLCCSG*SPTPGL Trigger: AAGCCCCGGAGTTGGAGACCAGCCAGAGCAACACAG...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000225929.5 ENST00000585807.6 |
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| CDS-3UTR CCA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTCTCACTGTGTTGCTCTaGCTGGTCTCCAACTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: RQPSRLAALVKLANAIYLLTVLL*LVSNSG Trigger: CCCGGAGTTGGAGACCAGCCAGAGCAACACAGTGAG...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000225929.5 ENST00000585807.6 |
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| CDS-3UTR CCA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTTCGATCAGGCTCAAGTaGACCCCAAAGGGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RQPSRLAALVKLANAIYLSIRLK*TPKGSS Trigger: GCTGCTGCCCTTTGGGGTCCACTTGAGCCTGATCGA...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585807.6 |
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| CDS-3UTR GCA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTGCCTCGCGAAAGACTTaGTTGCTGTGGGCGAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: RQPSRLAALVKLANAIYLASRKT*LLWARY Trigger: ATACCTCGCCCACAGCAAGCAAGTCTTTCGCGAGGC...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000225929.5 ENST00000585807.6 ENST00000590299.5 |
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| CDS-3UTR GCA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTGGGGTCTCACTGTGTTaGTCTGGCTGGTCTCCAACT | + |
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Preference number: 4 (lower is better) Translates to: RQPSRLAALVKLANAIYLGVSLC*SGWSPT Trigger: AGTTGGAGACCAGCCAGAGCAACACAGTGAGACCCC...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000225929.5 ENST00000585807.6 |
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| CDS-3UTR GCA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTCGCGAAAGACTTGCTTaGTGTGGGCGAGGTATTGGT | + |
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Preference number: 4 (lower is better) Translates to: RQPSRLAALVKLANAIYLRERLA*CGRGIG Trigger: ACCAATACCTCGCCCACAGCAAGCAAGTCTTTCGCG...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000225929.5 ENST00000585807.6 ENST00000590299.5 |
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| CDS-3UTR GCA 90 bp | CGCGAAAGACTTGCTTGCTGTGGGCGAGGTATTGGTAGAAGCGGTGGAAGGTGTCGCGAAAGACTTGCTTaGTGTGGGCGAGGTATTGGT | + |
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Preference number: 4 (lower is better) Translates to: RERLACCGRGIGRSGGRCRERLA*CGRGIG Trigger: ACCAATACCTCGCCCACAGCAAGCAAGTCTTTCGCG...ACACCTTCCACCGCTTCTACCAATACCTCGCCCACAGCAAGCAAGTCTTTCGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590299.5 |
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| CDS CCA 90 bp | GTCAGCAGGTGGCACAATGCGTGCCATGCGCCCAGCCCAAGTGCCTaGCACACAGCTAATGTGAGCCGGGCAGAGAGGGCCAGGGAGATC | + |
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Preference number: 5 (lower is better) Translates to: VSRWHNACHAPSPSA*HTANVSRAERAREI Trigger: GATCTCCCTGGCCCTCTCTGCCCGGCTCACATTAGCTGTGTGCCAGGCACTTGGGCTGGGCGCATGGCACGCATTGTGCCACCTGCTGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593215.1 |
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| CDS TCA 90 bp | CCCTGGTGTCAGGATTCGAATCTAGCGGGGTCCCTGGCCGCTGTGTaGCCTTGGGCCAGTCACCTAACCTCTCTGGGCTGGAGCTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: PWCQDSNLAGSLAAV*PWASHLTSLGWSFP Trigger: GGGGAAGCTCCAGCCCAGAGAGGTTAGGTGACTGGCCCAAGGTCACACAGCGGCCAGGGACCCCGCTAGATTCGAATCCTGACACCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593215.1 |
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| CDS-3UTR CAA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTCCCCAGCCTCGGCCTTaGCCGGAACGTCGCCGAACA | + |
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Preference number: 5 (lower is better) Translates to: RQPSRLAALVKLANAIYLPQPRP*PERRRT Trigger: TGTTCGGCGACGTTCCGGCAAAGGCCGAGGCTGGGG...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000225929.5 ENST00000585807.6 ENST00000590299.5 |
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| CDS-3UTR CAA 90 bp | GACTTGCTTGCTGTGGGCGAGGTATTGGTAGAAGCGGTGGAAGGTGTGGATGTCCCCCAGCCTCGGCCTTaGCCGGAACGTCGCCGAACA | + |
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Preference number: 5 (lower is better) Translates to: DLLAVGEVLVEAVEGVDVPQPRP*PERRRT Trigger: TGTTCGGCGACGTTCCGGCAAAGGCCGAGGCTGGGG...GACATCCACACCTTCCACCGCTTCTACCAATACCTCGCCCACAGCAAGCAAGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590299.5 |
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| CDS-3UTR CAA 90 bp | GCTGTGGGCGAGGTATTGGTAGAAGCGGTGGAAGGTGTGGATGTCCGTGCGGTCGCTGTGGGCGAGGTATaGGTAGAAGCGGTGGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: AVGEVLVEAVEGVDVRAVAVGEV*VEAVEG Trigger: ACCTTCCACCGCTTCTACCAATACCTCGCCCACAGC...GACCGCACGGACATCCACACCTTCCACCGCTTCTACCAATACCTCGCCCACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590299.5 |
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| CDS-3UTR CAA 90 bp | GGTTCTGCGCCGCCTCGCGAAAGACTTGCTTGCTGTGGGCGAGGTATTGGTAGACGCCTCGCGAAAGACTaGCTTGCTGTGGGCGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: GSAPPRERLACCGRGIGRRLAKD*LAVGEV Trigger: TACCTCGCCCACAGCAAGCAAGTCTTTCGCGAGGCG...TCTACCAATACCTCGCCCACAGCAAGCAAGTCTTTCGCGAGGCGGCGCAGAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590299.5 |
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| CDS-3UTR CAA 90 bp | GGTTCTGCGCCGCCTCGCGAAAGACTTGCTTGCTGTGGGCGAGGTATTGGTAGATCGCGAAAGACTTGCTaGCTGTGGGCGAGGTATTGG | + |
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Preference number: 5 (lower is better) Translates to: GSAPPRERLACCGRGIGRSRKTC*LWARYW Trigger: CCAATACCTCGCCCACAGCAAGCAAGTCTTTCGCGA...TCTACCAATACCTCGCCCACAGCAAGCAAGTCTTTCGCGAGGCGGCGCAGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590299.5 |
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| CDS-3UTR CAA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTCGCCTCGCGAAAGACTaGCTTGCTGTGGGCGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: RQPSRLAALVKLANAIYLRLAKD*LAVGEV Trigger: TACCTCGCCCACAGCAAGCAAGTCTTTCGCGAGGCG...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000225929.5 ENST00000585807.6 ENST00000590299.5 |
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| CDS-3UTR CAA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTCAGCGGCCACGGATTTaGAGTCCCTTACGTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: RQPSRLAALVKLANAIYLQRPRI*SPLRPA Trigger: AGCTGGACGTAAGGGACTCAAAATCCGTGGCCGCTG...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000225929.5 ENST00000585807.6 ENST00000590299.5 |
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| CDS-3UTR CAA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTGCTGTGGGCGAGGTATaGGTAGAAGCGGTGGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: RQPSRLAALVKLANAIYLAVGEV*VEAVEG Trigger: ACCTTCCACCGCTTCTACCAATACCTCGCCCACAGC...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000225929.5 ENST00000585807.6 ENST00000590299.5 |
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| CDS-3UTR CAA 90 bp | CGACAGCCATCGCGCCTAGCTGCGCTGGTAAAACTGGCTAACGCGATCTATCTTTCGCGAAAGACTTGCTaGCTGTGGGCGAGGTATTGG | + |
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Preference number: 5 (lower is better) Translates to: RQPSRLAALVKLANAIYLSRKTC*LWARYW Trigger: CCAATACCTCGCCCACAGCAAGCAAGTCTTTCGCGA...AAGATAGATCGCGTTAGCCAGTTTTACCAGCGCAGCTAGGCGCGATGGCTGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000225929.5 ENST00000585807.6 ENST00000590299.5 |
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| CDS CCA 72 bp | GCCCTCCCAAATCCATCTGAGGCTACAAGGGAGCCCTaGTGTCAGGATTCGAATCTAGCGGGGTCCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: ALPNPSEATREP*CQDSNLAGSLA Trigger: GGCCAGGGACCCCGCTAGATTCGAATCCTGACACCAGGGCTCCCTTGTAGCCTCAGATGGATTTGGGAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593215.1 |
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