RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HSBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000230989

Ensembl transcript IDs: ENST00000433866.7, ENST00000567382.1, ENST00000569301.1, ENST00000570259.1

Found 384 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGATCAGGACGCAAGCCCTGGTCCCGGGGTTCCAGCCCCATTTCTaGCTCTGGACAGCTGTGCGGCCTTCAGCAAGATCTTCCTTCTCT +
Preference number: 1 (lower is better)
Translates to: GIRTQALVPGFQPHF*LWTAVRPSARSSFS
Trigger: AGAGAAGGAAGATCTTGCTGAAGGCCGCACAGCTGTCCAGAGGCAGAAATGGGGCTGGAACCCCGGGACCAGGGCTTGCGTCCTGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR CCA 90 bp CAGGGACGCAGGTTTCGGATGGTCTGGTCAATGCTGCAGTGTGTGTaGGGCATTCGGGGGCTCCAGCCTGCATCACAACCTACTGGCCTG +
Preference number: 1 (lower is better)
Translates to: QGRRFRMVWSMLQCV*GIRGLQPASQPTGL
Trigger: CAGGCCAGTAGGTTGTGATGCAGGCTGGAGCCCCCGAATGCCCCACACACACTGCAGCATTGACCAGACCATCCGAAACCTGCGTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 90 bp AGGACGCAAGCCCTGGTCCCGGGGTTCCAGCCCCATTTCTGCCTCTaGACAGCTGTGCGGCCTTCAGCAAGATCTTCCTTCTCTGGGCTT +
Preference number: 1 (lower is better)
Translates to: RTQALVPGFQPHFCL*TAVRPSARSSFSGL
Trigger: AAGCCCAGAGAAGGAAGATCTTGCTGAAGGCCGCACAGCTGTCCAGAGGCAGAAATGGGGCTGGAACCCCGGGACCAGGGCTTGCGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR CCA 90 bp CCACTTCCGAGGCTTGAGAACATCACCAGGGACGCAGGTTTCGGATaGTCTGGTCAATGCTGCAGTGTGTGTGGGGCATTCGGGGGCTCC +
Preference number: 1 (lower is better)
Translates to: PLPRLENITRDAGFG*SGQCCSVCGAFGGS
Trigger: GGAGCCCCCGAATGCCCCACACACACTGCAGCATTGACCAGACCATCCGAAACCTGCGTCCCTGGTGATGTTCTCAAGCCTCGGAAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR GCA 90 bp GAGAACATCACCAGGGACGCAGGTTTCGGATGGTCTGGTCAATGCTaGAGTGTGTGTGGGGCATTCGGGGGCTCCAGCCTGCATCACAAC +
Preference number: 1 (lower is better)
Translates to: ENITRDAGFGWSGQC*SVCGAFGGSSLHHN
Trigger: GTTGTGATGCAGGCTGGAGCCCCCGAATGCCCCACACACACTGCAGCATTGACCAGACCATCCGAAACCTGCGTCCCTGGTGATGTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR GCA 90 bp CTTGAGAACATCACCAGGGACGCAGGTTTCGGATGGTCTGGTCAATaGTGCAGTGTGTGTGGGGCATTCGGGGGCTCCAGCCTGCATCAC +
Preference number: 1 (lower is better)
Translates to: LENITRDAGFGWSGQ*CSVCGAFGGSSLHH
Trigger: GTGATGCAGGCTGGAGCCCCCGAATGCCCCACACACACTGCAGCATTGACCAGACCATCCGAAACCTGCGTCCCTGGTGATGTTCTCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR GCA 90 bp TCTCCAGGGGCAAGAGTTCTGGGAACACACCTGAGACAAGTCTCCTaGAATGCCAGTCTTGGCAAGCCCTCCTCCCGCTCCTCAGCTTCC +
Preference number: 1 (lower is better)
Translates to: SPGARVLGTHLRQVS*NASLGKPSSRSSAS
Trigger: GGAAGCTGAGGAGCGGGAGGAGGGCTTGCCAAGACTGGCATTGCAGGAGACTTGTCTCAGGTGTGTTCCCAGAACTCTTGCCCCTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 90 bp TGGGCAACCCAACACCCTCGCCCCAAGGTTGATGCCCGAAGGCCCTaGCTCTCTCACTCTCAGAATCGCCTGGAGGATGTGTTAAAACCC +
Preference number: 1 (lower is better)
Translates to: WATQHPRPKVDARRP*LSHSQNRLEDVLKP
Trigger: GGGTTTTAACACATCCTCCAGGCGATTCTGAGAGTGAGAGAGCCAGGGCCTTCGGGCATCAACCTTGGGGCGAGGGTGTTGGGTTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 90 bp TCCTTCCTGCAGCATCTCCAGGGGCAAGAGTTCTGGGAACACACCTaGGACAAGTCTCCTGCAATGCCAGTCTTGGCAAGCCCTCCTCCC +
Preference number: 1 (lower is better)
Translates to: SFLQHLQGQEFWEHT*DKSPAMPVLASPPP
Trigger: GGGAGGAGGGCTTGCCAAGACTGGCATTGCAGGAGACTTGTCTCAGGTGTGTTCCCAGAACTCTTGCCCCTGGAGATGCTGCAGGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR GCA 90 bp CGTTTTCCAACCTGTCCAATTAGACTGCTGGGCTGGGGAGGCCGCTaGGACTCAAAGCTCAGGGTCTTTAGGTTGTTTCTGCCGGGCTGG +
Preference number: 1 (lower is better)
Translates to: RFPTCPIRLLGWGGR*DSKLRVFRLFLPGW
Trigger: CCAGCCCGGCAGAAACAACCTAAAGACCCTGAGCTTTGAGTCGCAGCGGCCTCCCCAGCCCAGCAGTCTAATTGGACAGGTTGGAAAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR CCA 90 bp CTGCCTCTGGACAGCTGTGCGGCCTTCAGCAAGATCTTCCTTCTCTaGGCTTCCGTTTTCCAACCTGTCCAATTAGACTGCTGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: LPLDSCAAFSKIFLL*ASVFQPVQLDCWAG
Trigger: CCCAGCCCAGCAGTCTAATTGGACAGGTTGGAAAACGGAAGCCCAGAGAAGGAAGATCTTGCTGAAGGCCGCACAGCTGTCCAGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR CCA 90 bp CCGAAACAAACAAACACGGTCCACATCGATCCTGAGACAACTTCCTaGGATCAGGACGCAAGCCCTGGTCCCGGGGTTCCAGCCCCATTT +
Preference number: 1 (lower is better)
Translates to: PKQTNTVHIDPETTS*DQDASPGPGVPAPF
Trigger: AAATGGGGCTGGAACCCCGGGACCAGGGCTTGCGTCCTGATCCCAGGAAGTTGTCTCAGGATCGATGTGGACCGTGTTTGTTTGTTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR TCA 90 bp GGGGGTCAAAGCCCTGATTGTCCAAGTTGGACGTGTCAGCTGGGTTaGCACGGGCGTGGCGGAATCCCATGGAACTTGGTGAATTACATC +
Preference number: 1 (lower is better)
Translates to: GGQSPDCPSWTCQLG*HGRGGIPWNLVNYI
Trigger: GATGTAATTCACCAAGTTCCATGGGATTCCGCCACGCCCGTGTCAACCCAGCTGACACGTCCAACTTGGACAATCAGGGCTTTGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 90 bp GAGTCTAAGATGAACACTGCTGTCTGGGCCCACCCATGGGGATTCTaGTGTGAGGGTTCTGTGGTGCTGCCCAGTTTTGGGCCTTTGAAC +
Preference number: 1 (lower is better)
Translates to: ESKMNTAVWAHPWGF*CEGSVVLPSFGPLN
Trigger: GTTCAAAGGCCCAAAACTGGGCAGCACCACAGAACCCTCACATCAGAATCCCCATGGGTGGGCCCAGACAGCAGTGTTCATCTTAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR GCA 90 bp GTTCGCAGTAGACAGGCCTTCTTGAATGCAGTTCTCGACCTCGACTaGACACTGGAGTCTAAGATGAACACTGCTGTCTGGGCCCACCCA +
Preference number: 1 (lower is better)
Translates to: VRSRQAFLNAVLDLD*TLESKMNTAVWAHP
Trigger: TGGGTGGGCCCAGACAGCAGTGTTCATCTTAGACTCCAGTGTGCAGTCGAGGTCGAGAACTGCATTCAAGAAGGCCTGTCTACTGCGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 90 bp GAATGGGTTAAGCTGGGATTCCTCAACCTCAGCACTGTTGACACTTaGGGCTGTGCCACTCTTTGGGGTGAGGGTTGTCCTGTGCATGGT +
Preference number: 1 (lower is better)
Translates to: EWVKLGFLNLSTVDT*GCATLWGEGCPVHG
Trigger: ACCATGCACAGGACAACCCTCACCCCAAAGAGTGGCACAGCCCCAAGTGTCAACAGTGCTGAGGTTGAGGAATCCCAGCTTAACCCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 90 bp CACCTAAGAAAAACCGAAACAAACAAACACGGTCCACATCGATCCTaGGACAACTTCCTGGGATCAGGACGCAAGCCCTGGTCCCGGGGT +
Preference number: 1 (lower is better)
Translates to: HLRKTETNKHGPHRS*DNFLGSGRKPWSRG
Trigger: ACCCCGGGACCAGGGCTTGCGTCCTGATCCCAGGAAGTTGTCTCAGGATCGATGTGGACCGTGTTTGTTTGTTTCGGTTTTTCTTAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR TCA 90 bp CGCTGCAAACCTTTCAGAACCAAGACCAGATACAGGGTCGTCTGCTaGAGGGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCC +
Preference number: 1 (lower is better)
Translates to: RCKPFRTKTRYRVVC*RGYEESRREHHGGS
Trigger: GGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCCCTTCAGCAGACGACCCTGTATCTGGTCTTGGTTCTGAAAGGTTTGCAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 90 bp GTTGGGACACAAATTGTTGGGGCATGCGTGACACATGGATTGAATTaGATGCCAGGTAACGGGGGTCAAAGCCCTGATTGTCCAAGTTGG +
Preference number: 1 (lower is better)
Translates to: VGTQIVGACVTHGLN*MPGNGGQSPDCPSW
Trigger: CCAACTTGGACAATCAGGGCTTTGACCCCCGTTACCTGGCATTCAATTCAATCCATGTGTCACGCATGCCCCAACAATTTGTGTCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 90 bp CAGCCACATATTACATTTCATCATTCTCAGGGATCCCACAGAGGCTaGTGTTGTACAGCTTTCAGGATCACTCGAACCCTAGGCAGCGGT +
Preference number: 1 (lower is better)
Translates to: QPHITFHHSQGSHRG*CCTAFRITRTLGSG
Trigger: ACCGCTGCCTAGGGTTCGAGTGATCCTGAAAGCTGTACAACATCAGCCTCTGTGGGATCCCTGAGAATGATGAAATGTAATATGTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 90 bp CGTCTGCTGAAGGGGTTACGAAGAGTCCAGAAGAGAACATCACGGTaGTTCCCAAGAAAGACCTTAACATCTCAGTGGTGTTTAATACAG +
Preference number: 1 (lower is better)
Translates to: RLLKGLRRVQKRTSR*FPRKTLTSQWCLIQ
Trigger: CTGTATTAAACACCACTGAGATGTTAAGGTCTTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCCCTTCAGCAGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 90 bp TTAAGAATCAATTCCTTTTCAATTATTTTAGGACTAGCCCAGGCCTaGGACTCCCAGCATGGGAGCATCGCCCACACTCCCATTTCTCTA +
Preference number: 1 (lower is better)
Translates to: LRINSFSIILGLAQA*DSQHGSIAHTPISL
Trigger: TAGAGAAATGGGAGTGTGGGCGATGCTCCCATGCTGGGAGTCTCAGGCCTGGGCTAGTCCTAAAATAATTGAAAAGGAATTGATTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 90 bp CAGGCAGGAAAAATGTCAGGCAGATCTGAAGCTGAATCCGGTTACTaGGTCATCACCCATCAGGGAATCAGAAATCCTTTGATTCAAACA +
Preference number: 1 (lower is better)
Translates to: QAGKMSGRSEAESGY*VITHQGIRNPLIQT
Trigger: TGTTTGAATCAAAGGATTTCTGATTCCCTGATGGGTGATGACTCAGTAACCGGATTCAGCTTCAGATCTGCCTGACATTTTTCCTGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 90 bp CTTCATAGCAGGATTTCAGGCACCTTTATTCATGGCAGATATTTTTaGTCAGGGCAGCCTGCCTTTGAAATCGTTCCATTACTTGAGGAG +
Preference number: 1 (lower is better)
Translates to: LHSRISGTFIHGRYF*SGQPAFEIVPLLEE
Trigger: CTCCTCAAGTAATGGAACGATTTCAAAGGCAGGCTGCCCTGACCAAAAATATCTGCCATGAATAAAGGTGCCTGAAATCCTGCTATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 90 bp GTTGGGTCACAGATTATTGTTAAGACTTGTCCAAGTTTGAGAAAATaGGAGTGGCCCAGGAAAAGAATCTTCCTCGCATCTCCTTCTGAG +
Preference number: 1 (lower is better)
Translates to: VGSQIIVKTCPSLRK*EWPRKRIFLASPSE
Trigger: CTCAGAAGGAGATGCGAGGAAGATTCTTTTCCTGGGCCACTCTCATTTTCTCAAACTTGGACAAGTCTTAACAATAATCTGTGACCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
3UTR CCA 90 bp AGTCATCACCCATCAGGGAATCAGAAATCCTTTGATTCAAACAGTTaGGACACAAATTGTTGGGGCATGCGTGACACATGGATTGAATTG +
Preference number: 1 (lower is better)
Translates to: SHHPSGNQKSFDSNS*DTNCWGMRDTWIEL
Trigger: CAATTCAATCCATGTGTCACGCATGCCCCAACAATTTGTGTCCCAACTGTTTGAATCAAAGGATTTCTGATTCCCTGATGGGTGATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 90 bp TCCTCGGTTCAGAAGGCAGAAGAGGTCACACTAGGTCCTAGAGCGTaGACGTTCTGGGTAATTAAGAATCAATTCCTTTTCAATTATTTT +
Preference number: 1 (lower is better)
Translates to: SSVQKAEEVTLGPRA*TFWVIKNQFLFNYF
Trigger: AAAATAATTGAAAAGGAATTGATTCTTAATTACCCAGAACGTCCACGCTCTAGGACCTAGTGTGACCTCTTCTGCCTTCTGAACCGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 90 bp AGGCTTCCATTTACAAACAGCATGTTGAAAAAGTTCACTTTTGTTTaGAGGACTCTATGTTCCCATAGCAACAGTGCTCTAAGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: RLPFTNSMLKKFTFV*RTLCSHSNSALSVC
Trigger: ACACACACTTAGAGCACTGTTGCTATGGGAACATAGAGTCCTCCAAACAAAAGTGAACTTTTTCAACATGCTGTTTGTAAATGGAAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 90 bp CAGAATTTGACCATTATTAGATCATTATTGCGAAGATTATTATTGTaGAGCAGGACAGTCAAGAGTGTTCTTATGAGGCAGGGCAGCATC +
Preference number: 1 (lower is better)
Translates to: QNLTIIRSLLRRLLL*SRTVKSVLMRQGSI
Trigger: GATGCTGCCCTGCCTCATAAGAACACTCTTGACTGTCCTGCTTCACAATAATAATCTTCGCAATAATGATCTAATAATGGTCAAATTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 90 bp TTCTTTAAATATGACTCATCAAATGAAAACCTCTCAGTGTTGTTGTaGGGATTAAGCCAAACAGTGCAAACAAAAGGCTTAGCACAGTAC +
Preference number: 1 (lower is better)
Translates to: FFKYDSSNENLSVLL*GLSQTVQTKGLAQY
Trigger: GTACTGTGCTAAGCCTTTTGTTTGCACTGTTTGGCTTAATCCTCACAACAACACTGAGAGGTTTTCATTTGATGAGTCATATTTAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR GCA 90 bp CCCTGGTCCCGGGGTTCCAGCCCCATTTCTGCCTCTGGACAGCTGTGCGGCCTTTCTTTAGGTTGTTTCTaGCGGGCTGGGGCACCCGGG +
Preference number: 2 (lower is better)
Translates to: PWSRGSSPISASGQLCGLSLGCF*RAGAPG
Trigger: CCCGGGTGCCCCAGCCCGGCAGAAACAACCTAAAGA...AAGGCCGCACAGCTGTCCAGAGGCAGAAATGGGGCTGGAACCCCGGGACCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR-3UTR CCA 90 bp CCCTGGTCCCGGGGTTCCAGCCCCATTTCTGCCTCTGGACAGCTGTGCGGCCTTATTAGACTGCTGGGCTaGGGAGGCCGCTGCGACTCA +
Preference number: 2 (lower is better)
Translates to: PWSRGSSPISASGQLCGLIRLLG*GGRCDS
Trigger: TGAGTCGCAGCGGCCTCCCCAGCCCAGCAGTCTAAT...AAGGCCGCACAGCTGTCCAGAGGCAGAAATGGGGCTGGAACCCCGGGACCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR-3UTR TCA 90 bp GGCCGCTGCGACTCAAAGCTCAGGGTCTTTAGGTTGTTTCTGCCGGGCTGGGGCGGGTGTGTGAGGAGTTaGAGGGCGGGGAGGGTGTCA +
Preference number: 2 (lower is better)
Translates to: GRCDSKLRVFRLFLPGWGGCVRS*RAGRVS
Trigger: TGACACCCTCCCCGCCCTTCAACTCCTCACACACCC...GCCCCAGCCCGGCAGAAACAACCTAAAGACCCTGAGCTTTGAGTCGCAGCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR-3UTR CCA 90 bp CTCAGGGTCTTTAGGTTGTTTCTGCCGGGCTGGGGCACCCGGGGGTGTGTGAGGTTCGCGACAGATGAATaGGGCTACTGGAAGGGGTCG +
Preference number: 2 (lower is better)
Translates to: LRVFRLFLPGWGTRGCVRFATDE*GYWKGS
Trigger: CGACCCCTTCCAGTAGCCCCATTCATCTGTCGCGAA...CCTCACACACCCCCGGGTGCCCCAGCCCGGCAGAAACAACCTAAAGACCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR-3UTR TCA 90 bp CTAGGTAGGGCCTGGGGATCTACATTTCCAGCACGTTCCCAGGGGATTCTGATGGGCAGGAGGACTGCCTaGGCCCAGGAGCTTCAGGCT +
Preference number: 2 (lower is better)
Translates to: LGRAWGSTFPARSQGILMGRRTA*AQELQA
Trigger: AGCCTGAAGCTCCTGGGCTCAGGCAGTCCTCCTGCC...CATCAGAATCCCCTGGGAACGTGCTGGAAATGTAGATCCCCAGGCCCTACCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR TCA 90 bp TCTGGACAGCTGTGCGGCCTTCAGCAAGATCTTCCTTCTCTGGGCTTCCGTTTTGCACCCGGGGGTGTGTaGGGAGTTGAAGGGCGGGGA +
Preference number: 2 (lower is better)
Translates to: SGQLCGLQQDLPSLGFRFAPGGV*GVEGRG
Trigger: TCCCCGCCCTTCAACTCCTCACACACCCCCGGGTGC...AAAACGGAAGCCCAGAGAAGGAAGATCTTGCTGAAGGCCGCACAGCTGTCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR CAA 90 bp ATTAGACTAAAGGGTGTTGGGCAACCCAACACCCTCGCCCCAAGGTaGATGCCCGAAGGCCCTGGCTCTCTCACTCTCAGAATCGCCTGG +
Preference number: 2 (lower is better)
Translates to: IRLKGVGQPNTLAPR*MPEGPGSLTLRIAW
Trigger: CCAGGCGATTCTGAGAGTGAGAGAGCCAGGGCCTTCGGGCATCAACCTTGGGGCGAGGGTGTTGGGTTGCCCAACACCCTTTAGTCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp CTAGGTAGGGCCTGGGGATCTACATTTCCAGCACGTTCCCAGGGGATTCTGATGCTGCAATGCCAGTCTTaGCAAGCCCTCCTCCCGCTC +
Preference number: 2 (lower is better)
Translates to: LGRAWGSTFPARSQGILMLQCQS*QALLPL
Trigger: GAGCGGGAGGAGGGCTTGCCAAGACTGGCATTGCAG...CATCAGAATCCCCTGGGAACGTGCTGGAAATGTAGATCCCCAGGCCCTACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp CCTGAGACAACTTCCTGGGATCAGGACGCAAGCCCTGGTCCCGGGGTTCCAGCCAAGATCTTCCTTCTCTaGGCTTCCGTTTTCCAACCT +
Preference number: 2 (lower is better)
Translates to: PETTSWDQDASPGPGVPAKIFLL*ASVFQP
Trigger: AGGTTGGAAAACGGAAGCCCAGAGAAGGAAGATCTT...GGCTGGAACCCCGGGACCAGGGCTTGCGTCCTGATCCCAGGAAGTTGTCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR-3UTR TCA 90 bp CAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGAGAGTTTCTATGGGGACCGAGCCCTGGGGATaGGGGCTCACAGACCCAGTG +
Preference number: 2 (lower is better)
Translates to: QCLGSVIPEFLCQRVSMGTEPWG*GLTDPV
Trigger: CACTGGGTCTGTGAGCCCTCATCCCCAGGGCTCGGT...CCCCATAGAAACTCTCTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
3UTR-3UTR CCA 90 bp GACTCCCAGCATGGGAGCATCGCCCACACTCCCATTTCTCTACGCAGTGTTTTTGAAGCTGTGGGGCCTTaGGGTTTGAGACAGGGCACT +
Preference number: 2 (lower is better)
Translates to: DSQHGSIAHTPISLRSVFEAVGP*GLRQGT
Trigger: AGTGCCCTGTCTCAAACCCCAAGGCCCCACAGCTTC...AAAAACACTGCGTAGAGAAATGGGAGTGTGGGCGATGCTCCCATGCTGGGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CAA 90 bp GGTCTCATGAATGGGTTAAGCTGGGATTCCTCAACCTCAGCACTGTaGACACTTGGGGCTGTGCCACTCTTTGGGGTGAGGGTTGTCCTG +
Preference number: 2 (lower is better)
Translates to: GLMNGLSWDSSTSAL*TLGAVPLFGVRVVL
Trigger: CAGGACAACCCTCACCCCAAAGAGTGGCACAGCCCCAAGTGTCAACAGTGCTGAGGTTGAGGAATCCCAGCTTAACCCATTCATGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR TCA 90 bp CTAGGTAGGGCCTGGGGATCTACATTTCCAGCACGTTCCCAGGGGATTCTGATGTTTGTTTTTGGGCAGTaGCTTGCATCTCCCCTCCCT +
Preference number: 2 (lower is better)
Translates to: LGRAWGSTFPARSQGILMFVFGQ*LASPLP
Trigger: AGGGAGGGGAGATGCAAGTCACTGCCCAAAAACAAA...CATCAGAATCCCCTGGGAACGTGCTGGAAATGTAGATCCCCAGGCCCTACCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR GCA 90 bp GGTGAATTACATCATCGGACGGTTCGCAGTAGACAGGCCTTCTTGAATGCAGTTTCGGGGGCTCCAGCCTaGATCACAACCTACTGGCCT +
Preference number: 2 (lower is better)
Translates to: GELHHRTVRSRQAFLNAVSGAPA*ITTYWP
Trigger: AGGCCAGTAGGTTGTGATGCAGGCTGGAGCCCCCGA...AACTGCATTCAAGAAGGCCTGTCTACTGCGAACCGTCCGATGATGTAATTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR GCA 90 bp GCTGAAGGGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAATACTCGCCCCAGAGCTaGCCTCCCTTGGGACTTCTT +
Preference number: 2 (lower is better)
Translates to: AEGVTKSPEENITVVPKKYSPQS*PPLGLL
Trigger: AAGAAGTCCCAAGGGAGGGCAGCTCTGGGGCGAGTA...TTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCCCTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR TCA 90 bp GACTCCCAGCATGGGAGCATCGCCCACACTCCCATTTCTCTACGCAGTGTTTTTTTCTGGGAACACACCTaGGACAAGTCTCCTGCAATG +
Preference number: 2 (lower is better)
Translates to: DSQHGSIAHTPISLRSVFFWEHT*DKSPAM
Trigger: CATTGCAGGAGACTTGTCTCAGGTGTGTTCCCAGAA...AAAAACACTGCGTAGAGAAATGGGAGTGTGGGCGATGCTCCCATGCTGGGAGTC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR TCA 90 bp CAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGAGAGTTTCTATGGGGTGCCACTCTTTGGGGTaGGGGTTGTCCTGTGCATGG +
Preference number: 2 (lower is better)
Translates to: QCLGSVIPEFLCQRVSMGCHSLG*GLSCAW
Trigger: CCATGCACAGGACAACCCTCACCCCAAAGAGTGGCA...CCCCATAGAAACTCTCTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR TCA 90 bp AAAAACCGAAACAAACAAACACGGTCCACATCGATCCTGAGACAACTTCCTGGGGGCGTTCGCGACAGATaGATGGGGCTACTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: KNRNKQTRSTSILRQLPGGVRDR*MGLLEG
Trigger: CCCTTCCAGTAGCCCCATTCATCTGTCGCGAACGCC...CCCAGGAAGTTGTCTCAGGATCGATGTGGACCGTGTTTGTTTGTTTCGGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR-3UTR GCA 90 bp CACTGCGCCCGGCCGGGTCTTGCTCTTAGTTTTACTGAGGTGCAGAATTTACTCCTGAGACAAGTCTCCTaGAATGCCAGTCTTGGCAAG +
Preference number: 2 (lower is better)
Translates to: HCARPGLALSFTEVQNLLLRQVS*NASLGK
Trigger: CTTGCCAAGACTGGCATTGCAGGAGACTTGTCTCAG...GAGTAAATTCTGCACCTCAGTAAAACTAAGAGCAAGACCCGGCCGGGCGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp GCTGAAGGGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAAGTCTGGCAGAGTGGATaGCAGGGAACAATGTCTGGG +
Preference number: 2 (lower is better)
Translates to: AEGVTKSPEENITVVPKKVWQSG*QGTMSG
Trigger: CCCAGACATTGTTCCCTGCCATCCACTCTGCCAGAC...TTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCCCTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR TCA 90 bp AAGGCAGAAGAGGTCACACTAGGTCCTAGAGCGTGGACGTTCTGGGTAATTAAGGGATCCCACAGAGGCTaGTGTTGTACAGCTTTCAGG +
Preference number: 2 (lower is better)
Translates to: KAEEVTLGPRAWTFWVIKGSHRG*CCTAFR
Trigger: CCTGAAAGCTGTACAACATCAGCCTCTGTGGGATCC...CTTAATTACCCAGAACGTCCACGCTCTAGGACCTAGTGTGACCTCTTCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR TCA 90 bp AGAAATCCTTTGATTCAAACAGTTGGGACACAAATTGTTGGGGCATGCGTGACAACGTGTCAGCTGGGTTaGCACGGGCGTGGCGGAATC +
Preference number: 2 (lower is better)
Translates to: RNPLIQTVGTQIVGACVTTCQLG*HGRGGI
Trigger: GATTCCGCCACGCCCGTGTCAACCCAGCTGACACGT...TGTCACGCATGCCCCAACAATTTGTGTCCCAACTGTTTGAATCAAAGGATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR GCA 90 bp TGTTCTCTTATGTCTCCACCTCTGAGGGTCCGGAAACTATCAGCAGAACCGTTACAACACCCCCTCTCCTaGTTTGCCTTGGGCTACTTG +
Preference number: 2 (lower is better)
Translates to: CSLMSPPLRVRKLSAEPLQHPLS*FALGYL
Trigger: CAAGTAGCCCAAGGCAAAGCAGGAGAGGGGGTGTTG...TAACGGTTCTGCTGATAGTTTCCGGACCCTCAGAGGTGGAGACATAAGAGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR GCA 90 bp AAGGCAGAAGAGGTCACACTAGGTCCTAGAGCGTGGACGTTCTGGGTAATTAAGTGGCTCAACCTATCATaGGGGTCCTGTTTGCCAGGA +
Preference number: 2 (lower is better)
Translates to: KAEEVTLGPRAWTFWVIKWLNLS*GSCLPG
Trigger: TCCTGGCAAACAGGACCCGCATGATAGGTTGAGCCA...CTTAATTACCCAGAACGTCCACGCTCTAGGACCTAGTGTGACCTCTTCTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp GCTGAAGGGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAAGACGCAGGTTTCGGATaGTCTGGTCAATGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: AEGVTKSPEENITVVPKKDAGFG*SGQCCS
Trigger: ACTGCAGCATTGACCAGACCATCCGAAACCTGCGTC...TTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCCCTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp GGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAAGACCTTAGATGTGAGGGTTCTGTaGTGCTGCCCAGTTTTGGGC +
Preference number: 2 (lower is better)
Translates to: GLRRVQKRTSRWFPRKTLDVRVL*CCPVLG
Trigger: GCCCAAAACTGGGCAGCACCACAGAACCCTCACATC...TAAGGTCTTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CAA 90 bp CTTGGTGAATTACATCATCGGACGGTTCGCAGTAGACAGGCCTTCTaGAATGCAGTTCTCGACCTCGACTGCACACTGGAGTCTAAGATG +
Preference number: 2 (lower is better)
Translates to: LGELHHRTVRSRQAF*NAVLDLDCTLESKM
Trigger: CATCTTAGACTCCAGTGTGCAGTCGAGGTCGAGAACTGCATTCAAGAAGGCCTGTCTACTGCGAACCGTCCGATGATGTAATTCACCAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR TCA 90 bp AATGTCTGGCAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGATCAAGAGTGTTCTTATaGGGCAGGGCAGCATCTACA +
Preference number: 2 (lower is better)
Translates to: NVWQSGWQGTMSGVSDSRSRVFL*GRAAST
Trigger: TGTAGATGCTGCCCTGCCTCATAAGAACACTCTTGA...TCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTGCCAGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR GCA 90 bp GGTGAATTACATCATCGGACGGTTCGCAGTAGACAGGCCTTCTTGAATGCAGTTTGGTCTGGTCAATGCTaGAGTGTGTGTGGGGCATTC +
Preference number: 2 (lower is better)
Translates to: GELHHRTVRSRQAFLNAVWSGQC*SVCGAF
Trigger: GAATGCCCCACACACACTGCAGCATTGACCAGACCA...AACTGCATTCAAGAAGGCCTGTCTACTGCGAACCGTCCGATGATGTAATTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR GCA 90 bp TATTGTTCTCTTATGTCTCCACCTCTGAGGGTCCGGAAACTATCAGCAGAACCGACAAGTCTCCTGCAATaGCAGTCTTGGCAAGCCCTC +
Preference number: 2 (lower is better)
Translates to: YCSLMSPPLRVRKLSAEPTSLLQ*QSWQAL
Trigger: GAGGGCTTGCCAAGACTGGCATTGCAGGAGACTTGT...CGGTTCTGCTGATAGTTTCCGGACCCTCAGAGGTGGAGACATAAGAGAACAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR GCA 90 bp CTAGGTAGGGCCTGGGGATCTACATTTCCAGCACGTTCCCAGGGGATTCTGATGCAAATTGTTGGGGCATaGGTGACACATGGATTGAAT +
Preference number: 2 (lower is better)
Translates to: LGRAWGSTFPARSQGILMQIVGA*VTHGLN
Trigger: ATTCAATCCATGTGTCACGCATGCCCCAACAATTTG...CATCAGAATCCCCTGGGAACGTGCTGGAAATGTAGATCCCCAGGCCCTACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp AATGTCTGGCAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGATACACCAGGCTCAGGTaGTCTCATGAATGGGTTAAG +
Preference number: 2 (lower is better)
Translates to: NVWQSGWQGTMSGVSDSRYTRLR*SHEWVK
Trigger: CTTAACCCATTCATGAGACCACCTGAGCCTGGTGTA...TCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTGCCAGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CAA 90 bp GTAACGCTGTTTTCCTTGGTGCGAGGGCCCCCATACTCATCTGTATaGTTCAGCCCTCAAGAGAATCTTCACTGGCTGGTAAACGAACAA +
Preference number: 2 (lower is better)
Translates to: VTLFSLVRGPPYSSV*FSPQENLHWLVNEQ
Trigger: TTGTTCGTTTACCAGCCAGTGAAGATTCTCTTGAGGGCTGAACAATACAGATGAGTATGGGGGCCCTCGCACCAAGGAAAACAGCGTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR GCA 90 bp AAGGCAGAAGAGGTCACACTAGGTCCTAGAGCGTGGACGTTCTGGGTAATTAAGTTTTGGGCAGTGACTTaGATCTCCCCTCCCTCATTT +
Preference number: 2 (lower is better)
Translates to: KAEEVTLGPRAWTFWVIKFWAVT*ISPPSF
Trigger: AAATGAGGGAGGGGAGATGCAAGTCACTGCCCAAAA...CTTAATTACCCAGAACGTCCACGCTCTAGGACCTAGTGTGACCTCTTCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp CTAGGTAGGGCCTGGGGATCTACATTTCCAGCACGTTCCCAGGGGATTCTGATGTGTGCCACCACACTCTaGGCTAATTTTTCTACTTTT +
Preference number: 2 (lower is better)
Translates to: LGRAWGSTFPARSQGILMCATTL*ANFSTF
Trigger: AAAAGTAGAAAAATTAGCCCAGAGTGTGGTGGCACA...CATCAGAATCCCCTGGGAACGTGCTGGAAATGTAGATCCCCAGGCCCTACCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp GCTGAAGGGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAAAAATGTCTGGCAGAGTaGATGGCAGGGAACAATGTC +
Preference number: 2 (lower is better)
Translates to: AEGVTKSPEENITVVPKKKCLAE*MAGNNV
Trigger: GACATTGTTCCCTGCCATCCACTCTGCCAGACATTT...TTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCCCTTCAGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp AAGGCAGAAGAGGTCACACTAGGTCCTAGAGCGTGGACGTTCTGGGTAATTAAGAATCCAAGAAATGTCTaGCAGAGTGGATGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: KAEEVTLGPRAWTFWVIKNPRNV*QSGWQG
Trigger: TCCCTGCCATCCACTCTGCCAGACATTTCTTGGATT...CTTAATTACCCAGAACGTCCACGCTCTAGGACCTAGTGTGACCTCTTCTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CAA 90 bp ACATATTACATTTCATCATTCTCAGGGATCCCACAGAGGCTGATGTaGTACAGCTTTCAGGATCACTCGAACCCTAGGCAGCGGTCTGAG +
Preference number: 2 (lower is better)
Translates to: TYYISSFSGIPQRLM*YSFQDHSNPRQRSE
Trigger: CTCAGACCGCTGCCTAGGGTTCGAGTGATCCTGAAAGCTGTACAACATCAGCCTCTGTGGGATCCCTGAGAATGATGAAATGTAATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR TCA 90 bp TATTGTTCTCTTATGTCTCCACCTCTGAGGGTCCGGAAACTATCAGCAGAACCGCTGGCACTGCATTTTTaGGTGGCCAGAGATAAAGGT +
Preference number: 2 (lower is better)
Translates to: YCSLMSPPLRVRKLSAEPLALHF*VARDKG
Trigger: ACCTTTATCTCTGGCCACTCAAAAATGCAGTGCCAG...CGGTTCTGCTGATAGTTTCCGGACCCTCAGAGGTGGAGACATAAGAGAACAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR GCA 90 bp AAGGCAGAAGAGGTCACACTAGGTCCTAGAGCGTGGACGTTCTGGGTAATTAAGATTCCAGAGTTTTTGTaGCAGAGAGTTTCTATGGGG +
Preference number: 2 (lower is better)
Translates to: KAEEVTLGPRAWTFWVIKIPEFL*QRVSMG
Trigger: CCCCATAGAAACTCTCTGGCACAAAAACTCTGGAAT...CTTAATTACCCAGAACGTCCACGCTCTAGGACCTAGTGTGACCTCTTCTGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp TATTGTTCTCTTATGTCTCCACCTCTGAGGGTCCGGAAACTATCAGCAGAACCGACGCTTCTAAGCTGCTaGATCCTGAATCCAGACTAT +
Preference number: 2 (lower is better)
Translates to: YCSLMSPPLRVRKLSAEPTLLSC*ILNPDY
Trigger: ATAGTCTGGATTCAGGATCCAGCAGCTTAGAAGCGT...CGGTTCTGCTGATAGTTTCCGGACCCTCAGAGGTGGAGACATAAGAGAACAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp CAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGAGAGTTTCTATGGGGATGAATGGGTTAAGCTaGGATTCCTCAACCTCAGCA +
Preference number: 2 (lower is better)
Translates to: QCLGSVIPEFLCQRVSMGMNGLS*DSSTSA
Trigger: TGCTGAGGTTGAGGAATCCCAGCTTAACCCATTCAT...CCCCATAGAAACTCTCTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp AATGTCTGGCAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGCCTCAATAAGATTCTaGAGCAGAATCAGTCAAATG +
Preference number: 2 (lower is better)
Translates to: NVWQSGWQGTMSGVSDSRASIRF*SRISQM
Trigger: CATTTGACTGATTCTGCTCCAGAATCTTATTGAGGC...TCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTGCCAGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
3UTR-3UTR CCA 90 bp AAGGCAGAAGAGGTCACACTAGGTCCTAGAGCGTGGACGTTCTGGGTAATTAAGGCCAGAGAGTTTCTATaGGGTCTGTTTTTCATCATG +
Preference number: 2 (lower is better)
Translates to: KAEEVTLGPRAWTFWVIKAREFL*GLFFIM
Trigger: CATGATGAAAAACAGACCCCATAGAAACTCTCTGGC...CTTAATTACCCAGAACGTCCACGCTCTAGGACCTAGTGTGACCTCTTCTGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR TCA 90 bp GGTGAATTACATCATCGGACGGTTCGCAGTAGACAGGCCTTCTTGAATGCAGTTTTTGAAAGTAAATTTTaGGATCCAGCCAGTGGGGCT +
Preference number: 2 (lower is better)
Translates to: GELHHRTVRSRQAFLNAVFESKF*DPASGA
Trigger: AGCCCCACTGGCTGGATCTCAAAATTTACTTTCAAA...AACTGCATTCAAGAAGGCCTGTCTACTGCGAACCGTCCGATGATGTAATTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR TCA 90 bp AATGTCTGGCAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGACTCATTTTCATTCATTaGAAAGTTCTCAAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: NVWQSGWQGTMSGVSDSRLIFIH*KVLKWL
Trigger: CAGCCACTTGAGAACTTTTCAATGAATGAAAATGAG...TCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTGCCAGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp AAGGCAGAAGAGGTCACACTAGGTCCTAGAGCGTGGACGTTCTGGGTAATTAAGGCCTCAATAAGATTCTaGAGCAGAATCAGTCAAATG +
Preference number: 2 (lower is better)
Translates to: KAEEVTLGPRAWTFWVIKASIRF*SRISQM
Trigger: CATTTGACTGATTCTGCTCCAGAATCTTATTGAGGC...CTTAATTACCCAGAACGTCCACGCTCTAGGACCTAGTGTGACCTCTTCTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp ATTCCCCGTGGTTGTGCTCTGGGCAAATGTTTGAGGAATGTCATTTGTTTCTGTTCTGACACAAGACAGTaGCAGTGGTTACTTTTCATC +
Preference number: 2 (lower is better)
Translates to: IPRGCALGKCLRNVICFCSDTRQ*QWLLFI
Trigger: GATGAAAAGTAACCACTGCCACTGTCTTGTGTCAGA...ACAGAAACAAATGACATTCCTCAAACATTTGCCCAGAGCACAACCACGGGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp GGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAAGACCTTAAAGTTCACTTTTGTTTaGAGGACTCTATGTTCCCAT +
Preference number: 2 (lower is better)
Translates to: GLRRVQKRTSRWFPRKTLKFTFV*RTLCSH
Trigger: ATGGGAACATAGAGTCCTCCAAACAAAAGTGAACTT...TAAGGTCTTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp CTTCAAGTTCTGAACTTGCTAAACGGTAACTTGTTGGAAGCATTACTAGCAAATGATTTCCAGACAGCCTaGACAGCTGAGATTCGGAGC +
Preference number: 2 (lower is better)
Translates to: LQVLNLLNGNLLEALLANDFQTA*TAEIRS
Trigger: GCTCCGAATCTCAGCTGTCCAGGCTGTCTGGAAATC...ATTTGCTAGTAATGCTTCCAACAAGTTACCGTTTAGCAAGTTCAGAACTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp CAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGAGAGTTTCTATGGGGGCAGAATCAGTCAAATaGTCTTATGTTTTCAGGAGA +
Preference number: 2 (lower is better)
Translates to: QCLGSVIPEFLCQRVSMGAESVK*SYVFRR
Trigger: TCTCCTGAAAACATAAGACCATTTGACTGATTCTGC...CCCCATAGAAACTCTCTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
3UTR-3UTR TCA 90 bp AGGTCTGTAGCAAACACTGTAGGTTGTCCACCCGATAGCCATTCTGATTTCCTTTATGCTTTGGTAAAATaGAGCTCTGTTGATGAGACA +
Preference number: 2 (lower is better)
Translates to: RSVANTVGCPPDSHSDFLYALVK*SSVDET
Trigger: TGTCTCATCAACAGAGCTTCATTTTACCAAAGCATA...AAGGAAATCAGAATGGCTATCGGGTGGACAACCTACAGTGTTTGCTACAGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR GCA 90 bp AGAAATCCTTTGATTCAAACAGTTGGGACACAAATTGTTGGGGCATGCGTGACAGGAAGGTGGACATTTTaGAAGACCAACGTGACTAAA +
Preference number: 2 (lower is better)
Translates to: RNPLIQTVGTQIVGACVTGRWTF*KTNVTK
Trigger: TTTAGTCACGTTGGTCTTGCAAAATGTCCACCTTCC...TGTCACGCATGCCCCAACAATTTGTGTCCCAACTGTTTGAATCAAAGGATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp CTTCAAGTTCTGAACTTGCTAAACGGTAACTTGTTGGAAGCATTACTAGCAAATTGGGACACAAATTGTTaGGGCATGCGTGACACATGG +
Preference number: 2 (lower is better)
Translates to: LQVLNLLNGNLLEALLANWDTNC*GMRDTW
Trigger: CCATGTGTCACGCATGCCCCAACAATTTGTGTCCCA...ATTTGCTAGTAATGCTTCCAACAAGTTACCGTTTAGCAAGTTCAGAACTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CAA 90 bp TTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTCAGCTaGAATAAATCCAAGAAATGTCTGGCAGAGTGGATGGCAGGGAAC +
Preference number: 2 (lower is better)
Translates to: LLANLVHNCSGIQVS*NKSKKCLAEWMAGN
Trigger: GTTCCCTGCCATCCACTCTGCCAGACATTTCTTGGATTTATTCAAGCTGACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
3UTR-3UTR TCA 90 bp ATTCCCCGTGGTTGTGCTCTGGGCAAATGTTTGAGGAATGTCATTTGTTTCTGTGTTGATACTCTAATGTaGTTTCTGCATTTCCATCTG +
Preference number: 2 (lower is better)
Translates to: IPRGCALGKCLRNVICFCVDTLM*FLHFHL
Trigger: CAGATGGAAATGCAGAAATCACATTAGAGTATCAAC...ACAGAAACAAATGACATTCCTCAAACATTTGCCCAGAGCACAACCACGGGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR TCA 90 bp CTTCAAGTTCTGAACTTGCTAAACGGTAACTTGTTGGAAGCATTACTAGCAAATATGCTAATTTCTTCATaGGGTTCACAGAATGTCGTC +
Preference number: 2 (lower is better)
Translates to: LQVLNLLNGNLLEALLANMLISS*GSQNVV
Trigger: GACGACATTCTGTGAACCTCATGAAGAAATTAGCAT...ATTTGCTAGTAATGCTTCCAACAAGTTACCGTTTAGCAAGTTCAGAACTTGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CAA 90 bp TTATTAGTCAGCGTTAGGATAAAAGGGATTCTTCAAGTTCTGAACTaGCTAAACGGTAACTTGTTGGAAGCATTACTAGCAAATCTTGTC +
Preference number: 2 (lower is better)
Translates to: LLVSVRIKGILQVLN*LNGNLLEALLANLV
Trigger: GACAAGATTTGCTAGTAATGCTTCCAACAAGTTACCGTTTAGCAAGTTCAGAACTTGAAGAATCCCTTTTATCCTAACGCTGACTAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR GCA 90 bp CTTCAAGTTCTGAACTTGCTAAACGGTAACTTGTTGGAAGCATTACTAGCAAATTGTGGTGTCTACATATaGTTTGGTAAAATGAAGCTC +
Preference number: 2 (lower is better)
Translates to: LQVLNLLNGNLLEALLANCGVYI*FGKMKL
Trigger: GAGCTTCATTTTACCAAAGCATATGTAGACACCACA...ATTTGCTAGTAATGCTTCCAACAAGTTACCGTTTAGCAAGTTCAGAACTTGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CCA 90 bp CTTCAAGTTCTGAACTTGCTAAACGGTAACTTGTTGGAAGCATTACTAGCAAATGCAGAATCAGTCAAATaGTCTTATGTTTTCAGGAGA +
Preference number: 2 (lower is better)
Translates to: LQVLNLLNGNLLEALLANAESVK*SYVFRR
Trigger: TCTCCTGAAAACATAAGACCATTTGACTGATTCTGC...ATTTGCTAGTAATGCTTCCAACAAGTTACCGTTTAGCAAGTTCAGAACTTGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CAA 90 bp ATAAAAGGGATTCTTCAAGTTCTGAACTTGCTAAACGGTAACTTGTaGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATA +
Preference number: 2 (lower is better)
Translates to: IKGILQVLNLLNGNL*EALLANLVHNCSGI
Trigger: TATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAAGTTACCGTTTAGCAAGTTCAGAACTTGAAGAATCCCTTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 72 bp GCGGGAGGGACCCGGAGGGCGTTCGCGACAGATGAATaGGGCTACTGGAAGGGGTCGGGCTTGGGGGCGCCC +
Preference number: 3 (lower is better)
Translates to: AGGTRRAFATDE*GYWKGSGLGAP
Trigger: GGGCGCCCCCAAGCCCGACCCCTTCCAGTAGCCCCATTCATCTGTCGCGAACGCCCTCCGGGTCCCTCCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR GCA 72 bp ACCAGGGACGCAGGTTTCGGATGGTCTGGTCAATGCTaGAGTGTGTGTGGGGCATTCGGGGGCTCCAGCCTG +
Preference number: 3 (lower is better)
Translates to: TRDAGFGWSGQC*SVCGAFGGSSL
Trigger: CAGGCTGGAGCCCCCGAATGCCCCACACACACTGCAGCATTGACCAGACCATCCGAAACCTGCGTCCCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR GCA 72 bp ACGCAAGCCCTGGTCCCGGGGTTCCAGCCCCATTTCTaGCTCTGGACAGCTGTGCGGCCTTCAGCAAGATCT +
Preference number: 3 (lower is better)
Translates to: TQALVPGFQPHF*LWTAVRPSARS
Trigger: AGATCTTGCTGAAGGCCGCACAGCTGTCCAGAGGCAGAAATGGGGCTGGAACCCCGGGACCAGGGCTTGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR TCA 72 bp AGGGTGTTGGGCAACCCAACACCCTCGCCCCAAGGTTaGTGCCCGAAGGCCCTGGCTCTCTCACTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: RVLGNPTPSPQG*CPKALALSLSE
Trigger: TTCTGAGAGTGAGAGAGCCAGGGCCTTCGGGCATCAACCTTGGGGCGAGGGTGTTGGGTTGCCCAACACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR GCA 72 bp ATCACCAGGGACGCAGGTTTCGGATGGTCTGGTCAATaGTGCAGTGTGTGTGGGGCATTCGGGGGCTCCAGC +
Preference number: 3 (lower is better)
Translates to: ITRDAGFGWSGQ*CSVCGAFGGSS
Trigger: GCTGGAGCCCCCGAATGCCCCACACACACTGCAGCATTGACCAGACCATCCGAAACCTGCGTCCCTGGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR GCA 72 bp CCCCGGCTGGAGTGGAGTCGTCCGATCACAGCTCACTaGAACCTCGACTTCCTGGGCTCAAATGATCCTCCC +
Preference number: 3 (lower is better)
Translates to: PRLEWSRPITAH*NLDFLGSNDPP
Trigger: GGGAGGATCATTTGAGCCCAGGAAGTCGAGGTTGCAGTGAGCTGTGATCGGACGACTCCACTCCAGCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 72 bp CAACACCCTCGCCCCAAGGTTGATGCCCGAAGGCCCTaGCTCTCTCACTCTCAGAATCGCCTGGAGGATGTG +
Preference number: 3 (lower is better)
Translates to: QHPRPKVDARRP*LSHSQNRLEDV
Trigger: CACATCCTCCAGGCGATTCTGAGAGTGAGAGAGCCAGGGCCTTCGGGCATCAACCTTGGGGCGAGGGTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR GCA 72 bp GCGCCCGGCCGGGTCTTGCTCTTAGTTTTACTGAGGTaGAGAATTTACTCGCCCCAGAGCTGCCCTCCCTTG +
Preference number: 3 (lower is better)
Translates to: APGRVLLLVLLR*RIYSPQSCPPL
Trigger: CAAGGGAGGGCAGCTCTGGGGCGAGTAAATTCTGCACCTCAGTAAAACTAAGAGCAAGACCCGGCCGGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR GCA 72 bp CGGGGTTCCAGCCCCATTTCTGCCTCTGGACAGCTGTaGGGCCTTCAGCAAGATCTTCCTTCTCTGGGCTTC +
Preference number: 3 (lower is better)
Translates to: RGSSPISASGQL*GLQQDLPSLGF
Trigger: GAAGCCCAGAGAAGGAAGATCTTGCTGAAGGCCGCACAGCTGTCCAGAGGCAGAAATGGGGCTGGAACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR-3UTR CAA 90 bp CTAGGTAGGGCCTGGGGATCTACATTTCCAGCACGTTCCCAGGGGATTCTGATGGACGTGTCAGCTGGGTaGACACGGGCGTGGCGGAAT +
Preference number: 3 (lower is better)
Translates to: LGRAWGSTFPARSQGILMDVSAG*TRAWRN
Trigger: ATTCCGCCACGCCCGTGTCAACCCAGCTGACACGTC...CATCAGAATCCCCTGGGAACGTGCTGGAAATGTAGATCCCCAGGCCCTACCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 72 bp AGCCCTGATTGTCCAAGTTGGACGTGTCAGCTGGGTTaGCACGGGCGTGGCGGAATCCCATGGAACTTGGTG +
Preference number: 3 (lower is better)
Translates to: SPDCPSWTCQLG*HGRGGIPWNLV
Trigger: CACCAAGTTCCATGGGATTCCGCCACGCCCGTGTCAACCCAGCTGACACGTCCAACTTGGACAATCAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR GCA 72 bp AGTTCTGGGAACACACCTGAGACAAGTCTCCTGCAATaGCAGTCTTGGCAAGCCCTCCTCCCGCTCCTCAGC +
Preference number: 3 (lower is better)
Translates to: SSGNTPETSLLQ*QSWQALLPLLS
Trigger: GCTGAGGAGCGGGAGGAGGGCTTGCCAAGACTGGCATTGCAGGAGACTTGTCTCAGGTGTGTTCCCAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR GCA 72 bp GCAAGAGTTCTGGGAACACACCTGAGACAAGTCTCCTaGAATGCCAGTCTTGGCAAGCCCTCCTCCCGCTCC +
Preference number: 3 (lower is better)
Translates to: ARVLGTHLRQVS*NASLGKPSSRS
Trigger: GGAGCGGGAGGAGGGCTTGCCAAGACTGGCATTGCAGGAGACTTGTCTCAGGTGTGTTCCCAGAACTCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 72 bp AGGTTTCGGATGGTCTGGTCAATGCTGCAGTGTGTGTaGGGCATTCGGGGGCTCCAGCCTGCATCACAACCT +
Preference number: 3 (lower is better)
Translates to: RFRMVWSMLQCV*GIRGLQPASQP
Trigger: AGGTTGTGATGCAGGCTGGAGCCCCCGAATGCCCCACACACACTGCAGCATTGACCAGACCATCCGAAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 72 bp ACAAACACGGTCCACATCGATCCTGAGACAACTTCCTaGGATCAGGACGCAAGCCCTGGTCCCGGGGTTCCA +
Preference number: 3 (lower is better)
Translates to: TNTVHIDPETTS*DQDASPGPGVP
Trigger: TGGAACCCCGGGACCAGGGCTTGCGTCCTGATCCCAGGAAGTTGTCTCAGGATCGATGTGGACCGTGTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR TCA 72 bp ATGAACACTGCTGTCTGGGCCCACCCATGGGGATTCTaGTGTGAGGGTTCTGTGGTGCTGCCCAGTTTTGGG +
Preference number: 3 (lower is better)
Translates to: MNTAVWAHPWGF*CEGSVVLPSFG
Trigger: CCCAAAACTGGGCAGCACCACAGAACCCTCACATCAGAATCCCCATGGGTGGGCCCAGACAGCAGTGTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 72 bp GATCCAGCCAGTGGGGCTGATGATTTCCAGACAGCCTaGACAGCTGAGATTCGGAGCTCAGCTCACACGAAG +
Preference number: 3 (lower is better)
Translates to: DPASGADDFQTA*TAEIRSSAHTK
Trigger: CTTCGTGTGAGCTGAGCTCCGAATCTCAGCTGTCCAGGCTGTCTGGAAATCATCAGCCCCACTGGCTGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 72 bp GTCAAAGCCCTGATTGTCCAAGTTGGACGTGTCAGCTaGGTTGACACGGGCGTGGCGGAATCCCATGGAACT +
Preference number: 3 (lower is better)
Translates to: VKALIVQVGRVS*VDTGVAESHGT
Trigger: AGTTCCATGGGATTCCGCCACGCCCGTGTCAACCCAGCTGACACGTCCAACTTGGACAATCAGGGCTTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 72 bp CCCAGGGTCTCTGATTCAGTAGGGCTAGGTAGGGCCTaGGGATCTACATTTCCAGCACGTTCCCAGGGGATT +
Preference number: 3 (lower is better)
Translates to: PRVSDSVGLGRA*GSTFPARSQGI
Trigger: AATCCCCTGGGAACGTGCTGGAAATGTAGATCCCCAGGCCCTACCTAGCCCTACTGAATCAGAGACCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 72 bp CAGCATCTCCAGGGGCAAGAGTTCTGGGAACACACCTaGGACAAGTCTCCTGCAATGCCAGTCTTGGCAAGC +
Preference number: 3 (lower is better)
Translates to: QHLQGQEFWEHT*DKSPAMPVLAS
Trigger: GCTTGCCAAGACTGGCATTGCAGGAGACTTGTCTCAGGTGTGTTCCCAGAACTCTTGCCCCTGGAGATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 72 bp CAGTTCTCGACCTCGACTGCACACTGGAGTCTAAGATaGACACTGCTGTCTGGGCCCACCCATGGGGATTCT +
Preference number: 3 (lower is better)
Translates to: QFSTSTAHWSLR*TLLSGPTHGDS
Trigger: AGAATCCCCATGGGTGGGCCCAGACAGCAGTGTTCATCTTAGACTCCAGTGTGCAGTCGAGGTCGAGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR GCA 72 bp ACCTGTCCAATTAGACTGCTGGGCTGGGGAGGCCGCTaGGACTCAAAGCTCAGGGTCTTTAGGTTGTTTCTG +
Preference number: 3 (lower is better)
Translates to: TCPIRLLGWGGR*DSKLRVFRLFL
Trigger: CAGAAACAACCTAAAGACCCTGAGCTTTGAGTCGCAGCGGCCTCCCCAGCCCAGCAGTCTAATTGGACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR CCA 72 bp AGGCTTGAGAACATCACCAGGGACGCAGGTTTCGGATaGTCTGGTCAATGCTGCAGTGTGTGTGGGGCATTC +
Preference number: 3 (lower is better)
Translates to: RLENITRDAGFG*SGQCCSVCGAF
Trigger: GAATGCCCCACACACACTGCAGCATTGACCAGACCATCCGAAACCTGCGTCCCTGGTGATGTTCTCAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 72 bp TATTTTAGGACTAGCCCAGGCCTGAGACTCCCAGCATaGGAGCATCGCCCACACTCCCATTTCTCTACGCAG +
Preference number: 3 (lower is better)
Translates to: YFRTSPGLRLPA*EHRPHSHFSTQ
Trigger: CTGCGTAGAGAAATGGGAGTGTGGGCGATGCTCCCATGCTGGGAGTCTCAGGCCTGGGCTAGTCCTAAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 72 bp TTCCGTTTTCCAACCTGTCCAATTAGACTGCTGGGCTaGGGAGGCCGCTGCGACTCAAAGCTCAGGGTCTTT +
Preference number: 3 (lower is better)
Translates to: FRFPTCPIRLLG*GGRCDSKLRVF
Trigger: AAAGACCCTGAGCTTTGAGTCGCAGCGGCCTCCCCAGCCCAGCAGTCTAATTGGACAGGTTGGAAAACGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR GCA 72 bp GGTTCTGTGGTGCTGCCCAGTTTTGGGCCTTTGAACTaGTCCCCAGGTGATTCTAATGTGCCACCAAGGTTG +
Preference number: 3 (lower is better)
Translates to: GSVVLPSFGPLN*SPGDSNVPPRL
Trigger: CAACCTTGGTGGCACATTAGAATCACCTGGGGAGCAGTTCAAAGGCCCAAAACTGGGCAGCACCACAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 72 bp TACATCATCGGACGGTTCGCAGTAGACAGGCCTTCTTaGATGCAGTTCTCGACCTCGACTGCACACTGGAGT +
Preference number: 3 (lower is better)
Translates to: YIIGRFAVDRPS*MQFSTSTAHWS
Trigger: ACTCCAGTGTGCAGTCGAGGTCGAGAACTGCATTCAAGAAGGCCTGTCTACTGCGAACCGTCCGATGATGTA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR GCA 72 bp GAACCACATGGCTCAACCTATCATGCGGGTCCTGTTTaGCAGGATCATTTTAGGCACAGGAGTGGGGTGGAA +
Preference number: 3 (lower is better)
Translates to: EPHGSTYHAGPV*QDHFRHRSGVE
Trigger: TTCCACCCCACTCCTGTGCCTAAAATGATCCTGGCAAACAGGACCCGCATGATAGGTTGAGCCATGTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 72 bp TCCAAGTTGGACGTGTCAGCTGGGTTGACACGGGCGTaGCGGAATCCCATGGAACTTGGTGAATTACATCAT +
Preference number: 3 (lower is better)
Translates to: SKLDVSAGLTRA*RNPMELGELHH
Trigger: ATGATGTAATTCACCAAGTTCCATGGGATTCCGCCACGCCCGTGTCAACCCAGCTGACACGTCCAACTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CAA 90 bp GCAGGGCAGCATCTACACGATAGGTATGTAGTTCATGTATGTGGTGTCTACATACCTGCAATGCCAGTCTaGGCAAGCCCTCCTCCCGCT +
Preference number: 3 (lower is better)
Translates to: AGQHLHDRYVVHVCGVYIPAMPV*ASPPPA
Trigger: AGCGGGAGGAGGGCTTGCCAAGACTGGCATTGCAGG...TATGTAGACACCACATACATGAACTACATACCTATCGTGTAGATGCTGCCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CAA 90 bp CAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGAGAGTTTCTATGGGGGCACCTGAGCCTGGCTaGCAGGAGAGATACCTATCA +
Preference number: 3 (lower is better)
Translates to: QCLGSVIPEFLCQRVSMGAPEPG*QERYLS
Trigger: TGATAGGTATCTCTCCTGCAAGCCAGGCTCAGGTGC...CCCCATAGAAACTCTCTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
3UTR TCA 72 bp TTCTTAATTATGGCCCCAGCGAACACAGGTTCTAATTaGGGCGCACCTGAGCCTGGCTTGCAGGAGAGATAC +
Preference number: 3 (lower is better)
Translates to: FLIMAPANTGSN*GAPEPGLQERY
Trigger: GTATCTCTCCTGCAAGCCAGGCTCAGGTGCGCCTCAATTAGAACCTGTGTTCGCTGGGGCCATAATTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
3UTR GCA 72 bp AGACAGGCCTTCTTGAATGCAGTTCTCGACCTCGACTaGACACTGGAGTCTAAGATGAACACTGCTGTCTGG +
Preference number: 3 (lower is better)
Translates to: RQAFLNAVLDLD*TLESKMNTAVW
Trigger: CCAGACAGCAGTGTTCATCTTAGACTCCAGTGTGCAGTCGAGGTCGAGAACTGCATTCAAGAAGGCCTGTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 72 bp CAGAACCGTTACACCAGGCTCAGGTGGTCTCATGAATaGGTTAAGCTGGGATTCCTCAACCTCAGCACTGTT +
Preference number: 3 (lower is better)
Translates to: QNRYTRLRWSHE*VKLGFLNLSTV
Trigger: AACAGTGCTGAGGTTGAGGAATCCCAGCTTAACCCATTCATGAGACCACCTGAGCCTGGTGTAACGGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CAA 90 bp GCTGAAGGGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAAAAATCGTTCCATTACTaGAGGAGGTCGACTCCTGCC +
Preference number: 3 (lower is better)
Translates to: AEGVTKSPEENITVVPKKKSFHY*RRSTPA
Trigger: GGCAGGAGTCGACCTCCTCAAGTAATGGAACGATTT...TTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCCCTTCAGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CAA 90 bp AAGGCAGAAGAGGTCACACTAGGTCCTAGAGCGTGGACGTTCTGGGTAATTAAGCAGGGCAGCCTGCCTTaGAAATCGTTCCATTACTTG +
Preference number: 3 (lower is better)
Translates to: KAEEVTLGPRAWTFWVIKQGSLP*KSFHYL
Trigger: CAAGTAATGGAACGATTTCAAAGGCAGGCTGCCCTG...CTTAATTACCCAGAACGTCCACGCTCTAGGACCTAGTGTGACCTCTTCTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 72 bp TGGAACCCTGGTATTGTTCTCTTATGTCTCCACCTCTaGGGGTCCGGAAACTATCAGCAGAACCGTTACACC +
Preference number: 3 (lower is better)
Translates to: WNPGIVLLCLHL*GSGNYQQNRYT
Trigger: GGTGTAACGGTTCTGCTGATAGTTTCCGGACCCTCAGAGGTGGAGACATAAGAGAACAATACCAGGGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 72 bp CCTTTCAGAACCAAGACCAGATACAGGGTCGTCTGCTaGAGGGGTTACGAAGAGTCCAGAAGAGAACATCAC +
Preference number: 3 (lower is better)
Translates to: PFRTKTRYRVVC*RGYEESRREHH
Trigger: GTGATGTTCTCTTCTGGACTCTTCGTAACCCCTTCAGCAGACGACCCTGTATCTGGTCTTGGTTCTGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CAA 90 bp AGAAATCCTTTGATTCAAACAGTTGGGACACAAATTGTTGGGGCATGCGTGACAGTAACGCTGTTTTCCTaGGTGCGAGGGCCCCCATAC +
Preference number: 3 (lower is better)
Translates to: RNPLIQTVGTQIVGACVTVTLFS*VRGPPY
Trigger: GTATGGGGGCCCTCGCACCAAGGAAAACAGCGTTAC...TGTCACGCATGCCCCAACAATTTGTGTCCCAACTGTTTGAATCAAAGGATTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 72 bp GGGAGACAGGACAGGTATAGGCATGGAAAACCAATGTaGAAACCTGTGGTTCATATTCCCCGTGGTTGTGCT +
Preference number: 3 (lower is better)
Translates to: GRQDRYRHGKPM*KPVVHIPRGCA
Trigger: AGCACAACCACGGGGAATATGAACCACAGGTTTTCACATTGGTTTTCCATGCCTATACCTGTCCTGTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 72 bp CAAATTGTTGGGGCATGCGTGACACATGGATTGAATTaGATGCCAGGTAACGGGGGTCAAAGCCCTGATTGT +
Preference number: 3 (lower is better)
Translates to: QIVGACVTHGLN*MPGNGGQSPDC
Trigger: ACAATCAGGGCTTTGACCCCCGTTACCTGGCATTCAATTCAATCCATGTGTCACGCATGCCCCAACAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CAA 90 bp AATGTCTGGCAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAACAATTCCTCTGGTTTaGTTTTTGGGCAGTGACTTG +
Preference number: 3 (lower is better)
Translates to: NVWQSGWQGTMSGVSDSRTIPLV*FLGSDL
Trigger: CAAGTCACTGCCCAAAAACAAAACCAGAGGAATTGT...TCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTGCCAGACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CAA 90 bp AGGTCTGTAGCAAACACTGTAGGTTGTCCACCCGATAGCCATTCTGATTTCCTTCCACAGAGGCTGATGTaGTACAGCTTTCAGGATCAC +
Preference number: 3 (lower is better)
Translates to: RSVANTVGCPPDSHSDFLPQRLM*YSFQDH
Trigger: GTGATCCTGAAAGCTGTACAACATCAGCCTCTGTGG...AAGGAAATCAGAATGGCTATCGGGTGGACAACCTACAGTGTTTGCTACAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CAA 90 bp AATGTCTGGCAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGACAAGACTGCGTACTTTaGACAGATGGCTTTCAAAAC +
Preference number: 3 (lower is better)
Translates to: NVWQSGWQGTMSGVSDSRQDCVL*TDGFQN
Trigger: GTTTTGAAAGCCATCTGTCAAAAGTACGCAGTCTTG...TCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTGCCAGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
3UTR-3UTR CAA 90 bp GACTCCCAGCATGGGAGCATCGCCCACACTCCCATTTCTCTACGCAGTGTTTTTATGGGGAAGACAAAGTaGGGTCACAGATTATTGTTA +
Preference number: 3 (lower is better)
Translates to: DSQHGSIAHTPISLRSVFMGKTK*GHRLLL
Trigger: TAACAATAATCTGTGACCCAACTTTGTCTTCCCCAT...AAAAACACTGCGTAGAGAAATGGGAGTGTGGGCGATGCTCCCATGCTGGGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CAA 90 bp AAGGCAGAAGAGGTCACACTAGGTCCTAGAGCGTGGACGTTCTGGGTAATTAAGGCTCTGGGCAAATGTTaGAGGAATGTCATTTGTTTC +
Preference number: 3 (lower is better)
Translates to: KAEEVTLGPRAWTFWVIKALGKC*RNVICF
Trigger: GAAACAAATGACATTCCTCAAACATTTGCCCAGAGC...CTTAATTACCCAGAACGTCCACGCTCTAGGACCTAGTGTGACCTCTTCTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR GCA 72 bp AAAACAAGTCCCAGTAGAGAGCAGGAGAATGAATTCTaGCAGAACTTCAGTGACTTAGGTGCCGCTGCAAAC +
Preference number: 3 (lower is better)
Translates to: KTSPSREQENEF*QNFSDLGAAAN
Trigger: GTTTGCAGCGGCACCTAAGTCACTGAAGTTCTGGCAGAATTCATTCTCCTGCTCTCTACTGGGACTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 72 bp AAGGGGTTACGAAGAGTCCAGAAGAGAACATCACGGTaGTTCCCAAGAAAGACCTTAACATCTCAGTGGTGT +
Preference number: 3 (lower is better)
Translates to: KGLRRVQKRTSR*FPRKTLTSQWC
Trigger: ACACCACTGAGATGTTAAGGTCTTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CAA 90 bp GGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAAGACCTTACCATACTCATCTGTATaGTTCAGCCCTCAAGAGAAT +
Preference number: 3 (lower is better)
Translates to: GLRRVQKRTSRWFPRKTLPYSSV*FSPQEN
Trigger: ATTCTCTTGAGGGCTGAACAATACAGATGAGTATGG...TAAGGTCTTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 72 bp TGTTCCCATAGCAACAGTGCTCTAAGTGTGTGTGTGTaGGGCTTAAATTCCAAGGACTCACAAGGGCAAATT +
Preference number: 3 (lower is better)
Translates to: CSHSNSALSVCV*GLNSKDSQGQI
Trigger: AATTTGCCCTTGTGAGTCCTTGGAATTTAAGCCCCACACACACACACTTAGAGCACTGTTGCTATGGGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 72 bp CCATCAGGGAATCAGAAATCCTTTGATTCAAACAGTTaGGACACAAATTGTTGGGGCATGCGTGACACATGG +
Preference number: 3 (lower is better)
Translates to: PSGNQKSFDSNS*DTNCWGMRDTW
Trigger: CCATGTGTCACGCATGCCCCAACAATTTGTGTCCCAACTGTTTGAATCAAAGGATTTCTGATTCCCTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CAA 90 bp AGAAATCCTTTGATTCAAACAGTTGGGACACAAATTGTTGGGGCATGCGTGACAGAACACAGTGTCTGCTaGGGAAGGCTTCCATTTACA +
Preference number: 3 (lower is better)
Translates to: RNPLIQTVGTQIVGACVTEHSVC*GRLPFT
Trigger: TGTAAATGGAAGCCTTCCCAAGCAGACACTGTGTTC...TGTCACGCATGCCCCAACAATTTGTGTCCCAACTGTTTGAATCAAAGGATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 72 bp ATTACATTTCATCATTCTCAGGGATCCCACAGAGGCTaGTGTTGTACAGCTTTCAGGATCACTCGAACCCTA +
Preference number: 3 (lower is better)
Translates to: ITFHHSQGSHRG*CCTAFRITRTL
Trigger: TAGGGTTCGAGTGATCCTGAAAGCTGTACAACATCAGCCTCTGTGGGATCCCTGAGAATGATGAAATGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 72 bp AAAATGTCAGGCAGATCTGAAGCTGAATCCGGTTACTaGGTCATCACCCATCAGGGAATCAGAAATCCTTTG +
Preference number: 3 (lower is better)
Translates to: KMSGRSEAESGY*VITHQGIRNPL
Trigger: CAAAGGATTTCTGATTCCCTGATGGGTGATGACTCAGTAACCGGATTCAGCTTCAGATCTGCCTGACATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 72 bp TGGCTTGCAGGAGAGATACCTATCAAAGGGAAAGGCTaGTTTCTTTTGAGGGCATTGTTTTGCAGCATTTCC +
Preference number: 3 (lower is better)
Translates to: WLAGEIPIKGKG*FLLRALFCSIS
Trigger: GGAAATGCTGCAAAACAATGCCCTCAAAAGAAATCAGCCTTTCCCTTTGATAGGTATCTCTCCTGCAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
3UTR TCA 72 bp ACTGAGTCATCACCCATCAGGGAATCAGAAATCCTTTaGTTCAAACAGTTGGGACACAAATTGTTGGGGCAT +
Preference number: 3 (lower is better)
Translates to: TESSPIRESEIL*FKQLGHKLLGH
Trigger: ATGCCCCAACAATTTGTGTCCCAACTGTTTGAATCAAAGGATTTCTGATTCCCTGATGGGTGATGACTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR GCA 72 bp GATGCTGCCGGTTCAGGAACGTATTTTAAGAACCACTaGCCTATGGGAAATGTCTCCAAGGAAGAAAATATT +
Preference number: 3 (lower is better)
Translates to: DAAGSGTYFKNH*PMGNVSKEENI
Trigger: AATATTTTCTTCCTTGGAGACATTTCCCATAGGGCAGTGGTTCTTAAAATACGTTCCTGAACCGGCAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR GCA 72 bp AATGTGAAAACCTGTGGTTCATATTCCCCGTGGTTGTaGTCTGGGCAAATGTTTGAGGAATGTCATTTGTTT +
Preference number: 3 (lower is better)
Translates to: NVKTCGSYSPWL*SGQMFEECHLF
Trigger: AAACAAATGACATTCCTCAAACATTTGCCCAGAGCACAACCACGGGGAATATGAACCACAGGTTTTCACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 72 bp GGAAGGTGGACATTTTGCAAGACCAACGTGACTAAATaGTCAAATTCTGTTTTCTACGGTAGAGACACAGAA +
Preference number: 3 (lower is better)
Translates to: GRWTFCKTNVTK*SNSVFYGRDTE
Trigger: TTCTGTGTCTCTACCGTAGAAAACAGAATTTGACCATTTAGTCACGTTGGTCTTGCAAAATGTCCACCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 72 bp AAATCCTTTGATTCAAACAGTTGGGACACAAATTGTTaGGGCATGCGTGACACATGGATTGAATTGAATGCC +
Preference number: 3 (lower is better)
Translates to: KSFDSNSWDTNC*GMRDTWIELNA
Trigger: GGCATTCAATTCAATCCATGTGTCACGCATGCCCCAACAATTTGTGTCCCAACTGTTTGAATCAAAGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR-3UTR CAA 90 bp CTTCAAGTTCTGAACTTGCTAAACGGTAACTTGTTGGAAGCATTACTAGCAAATCTCTCCTGCTTTGCCTaGGGCTACTTGTACTTAATC +
Preference number: 3 (lower is better)
Translates to: LQVLNLLNGNLLEALLANLSCFA*GYLYLI
Trigger: GATTAAGTACAAGTAGCCCAAGGCAAAGCAGGAGAG...ATTTGCTAGTAATGCTTCCAACAAGTTACCGTTTAGCAAGTTCAGAACTTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 72 bp CTACAGCAATGGTTTACAAATGGAGGTTTTGAAGGCTaGTTAGAGGGAGATGAATTCCAGCTGGAAAACTTT +
Preference number: 3 (lower is better)
Translates to: LQQWFTNGGFEG*LEGDEFQLENF
Trigger: AAAGTTTTCCAGCTGGAATTCATCTCCCTCTAATCAGCCTTCAAAACCTCCATTTGTAAACCATTGCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 72 bp ATCTTGTCCACAATTGTTCTGGAATACAAGTCAGCTTaGATAAATCCAAGAAATGTCTGGCAGAGTGGATGG +
Preference number: 3 (lower is better)
Translates to: ILSTIVLEYKSA*INPRNVWQSGW
Trigger: CCATCCACTCTGCCAGACATTTCTTGGATTTATTCAAGCTGACTTGTATTCCAGAACAATTGTGGACAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
3UTR TCA 72 bp GGGCTACTTGTACTTAATCCGTCCAGAGGTTTTAGTTaGTACTCTAATGTGATTTCTGCATTTCCATCTGAA +
Preference number: 3 (lower is better)
Translates to: GLLVLNPSRGFS*YSNVISAFPSE
Trigger: TTCAGATGGAAATGCAGAAATCACATTAGAGTATCAACTAAAACCTCTGGACGGATTAAGTACAAGTAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CCA 72 bp AATAATTCGGTCCAGTCCTTTGCCTCAATAAGATTCTaGAGCAGAATCAGTCAAATGGTCTTATGTTTTCAG +
Preference number: 3 (lower is better)
Translates to: NNSVQSFASIRF*SRISQMVLCFQ
Trigger: CTGAAAACATAAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGACTGGACCGAATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
3UTR CCA 72 bp TTTACAAACAGCATGTTGAAAAAGTTCACTTTTGTTTaGAGGACTCTATGTTCCCATAGCAACAGTGCTCTA +
Preference number: 3 (lower is better)
Translates to: FTNSMLKKFTFV*RTLCSHSNSAL
Trigger: TAGAGCACTGTTGCTATGGGAACATAGAGTCCTCCAAACAAAAGTGAACTTTTTCAACATGCTGTTTGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR TCA 72 bp ACCATTATTAGATCATTATTGCGAAGATTATTATTGTaGAGCAGGACAGTCAAGAGTGTTCTTATGAGGCAG +
Preference number: 3 (lower is better)
Translates to: TIIRSLLRRLLL*SRTVKSVLMRQ
Trigger: CTGCCTCATAAGAACACTCTTGACTGTCCTGCTTCACAATAATAATCTTCGCAATAATGATCTAATAATGGT
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GGAGGGCGTTCGCGACAGATGAATGGGGCTACTGGAAGGGGTCGGGCTTGGGGGCCCCGGGGGTCAAGGTaGCCGGGAGCCTCGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GGRSRQMNGATGRGRAWGPRGSR*PGASAR
Trigger: TCTGGCCGAGGCTCCCGGCCACCTTGACCCCCGGGG...CCCCCAAGCCCGACCCCTTCCAGTAGCCCCATTCATCTGTCGCGAACGCCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000567382.1
CDS-3UTR CCA 90 bp CTCAGGGTCTTTAGGTTGTTTCTGCCGGGCTGGGGCACCCGGGGGTGTGTGAGGCTGTCCAGCAGGGCTTaGCCCGGCGCCGCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: LRVFRLFLPGWGTRGCVRLSSRA*PGAARE
Trigger: TTCCCGGGCGGCGCCGGGCCAAGCCCTGCTGGACAG...CCTCACACACCCCCGGGTGCCCCAGCCCGGCAGAAACAACCTAAAGACCCTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567382.1
CDS-3UTR TCA 90 bp GGTAGGCGGGAGGGACCCGGAGGGCGTTCGCGACAGATGAATGGGGCTACTGGAGCACCCGGGGGTGTGTaGGGAGTTGAAGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: GRREGPGGRSRQMNGATGAPGGV*GVEGRG
Trigger: TCCCCGCCCTTCAACTCCTCACACACCCCCGGGTGC...TCCAGTAGCCCCATTCATCTGTCGCGAACGCCCTCCGGGTCCCTCCCGCCTACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR CAA 72 bp GGAGGCCGCTGCGACTCAAAGCTCAGGGTCTTTAGGTaGTTTCTGCCGGGCTGGGGCACCCGGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GGRCDSKLRVFR*FLPGWGTRGCV
Trigger: CACACACCCCCGGGTGCCCCAGCCCGGCAGAAACAACCTAAAGACCCTGAGCTTTGAGTCGCAGCGGCCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567382.1
CDS-3UTR TCA 90 bp CCTGAGACAACTTCCTGGGATCAGGACGCAAGCCCTGGTCCCGGGGTTCCAGCCGGGTGTGTGAGGAGTTaGAGGGCGGGGAGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: PETTSWDQDASPGPGVPAGCVRS*RAGRVS
Trigger: TGACACCCTCCCCGCCCTTCAACTCCTCACACACCC...GGCTGGAACCCCGGGACCAGGGCTTGCGTCCTGATCCCAGGAAGTTGTCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567382.1
CDS-3UTR GCA 90 bp GGTAGGCGGGAGGGACCCGGAGGGCGTTCGCGACAGATGAATGGGGCTACTGGATCTTTAGGTTGTTTCTaGCGGGCTGGGGCACCCGGG +
Preference number: 4 (lower is better)
Translates to: GRREGPGGRSRQMNGATGSLGCF*RAGAPG
Trigger: CCCGGGTGCCCCAGCCCGGCAGAAACAACCTAAAGA...TCCAGTAGCCCCATTCATCTGTCGCGAACGCCCTCCGGGTCCCTCCCGCCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567382.1
CDS-3UTR TCA 90 bp CCCGGGGTTCCAGCCCCATTTCTGCCTCTGGACAGCTGTGCGGCCTTCAGCAAGGGCGTTCGCGACAGATaGATGGGGCTACTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PGVPAPFLPLDSCAAFSKGVRDR*MGLLEG
Trigger: CCCTTCCAGTAGCCCCATTCATCTGTCGCGAACGCC...CTTGCTGAAGGCCGCACAGCTGTCCAGAGGCAGAAATGGGGCTGGAACCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567382.1
CDS-3UTR CCA 90 bp TCCCGGGGTTCCAGCCCCATTTCTGCCTCTGGACAGCTGTGCGGCCTTCAGCAAATTAGACTGCTGGGCTaGGGAGGCCGCTGCGACTCA +
Preference number: 4 (lower is better)
Translates to: SRGSSPISASGQLCGLQQIRLLG*GGRCDS
Trigger: TGAGTCGCAGCGGCCTCCCCAGCCCAGCAGTCTAAT...TTGCTGAAGGCCGCACAGCTGTCCAGAGGCAGAAATGGGGCTGGAACCCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567382.1
CDS-3UTR CCA 90 bp TGGTCCCGGGGTTCCAGCCCCATTTCTGCCTCTGGACAGCTGTGCGGCCTTCAGTTCGCGACAGATGAATaGGGCTACTGGAAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: WSRGSSPISASGQLCGLQFATDE*GYWKGS
Trigger: CGACCCCTTCCAGTAGCCCCATTCATCTGTCGCGAA...CTGAAGGCCGCACAGCTGTCCAGAGGCAGAAATGGGGCTGGAACCCCGGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR CAA 72 bp AAGGGTGTTGGGCAACCCAACACCCTCGCCCCAAGGTaGATGCCCGAAGGCCCTGGCTCTCTCACTCTCAGA +
Preference number: 4 (lower is better)
Translates to: KGVGQPNTLAPR*MPEGPGSLTLR
Trigger: TCTGAGAGTGAGAGAGCCAGGGCCTTCGGGCATCAACCTTGGGGCGAGGGTGTTGGGTTGCCCAACACCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp CCAACCTGTCCAATTAGACTGCTGGGCTGGGGAGGCCGCTGCGACTCAAAGCTCTTCCAGCCCCATTTCTaGCTCTGGACAGCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: PTCPIRLLGWGGRCDSKLFQPHF*LWTAVR
Trigger: CCGCACAGCTGTCCAGAGGCAGAAATGGGGCTGGAA...GAGCTTTGAGTCGCAGCGGCCTCCCCAGCCCAGCAGTCTAATTGGACAGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567382.1
CDS-3UTR TCA 90 bp GTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGGGCAGGAGGACTGCCTaGGCCCAGGAGCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: VDGREQCLGSVIPEFLCQGRRTA*AQELQA
Trigger: AGCCTGAAGCTCCTGGGCTCAGGCAGTCCTCCTGCC...CTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp GGGGAGGCCGCTGCGACTCAAAGCTCAGGGTCTTTAGGTTGTTTCTGCCGGGCTGGTCCACATCGATCCTaGGACAACTTCCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: GEAAATQSSGSLGCFCRAGPHRS*DNFLGS
Trigger: TGATCCCAGGAAGTTGTCTCAGGATCGATGTGGACC...AGCCCGGCAGAAACAACCTAAAGACCCTGAGCTTTGAGTCGCAGCGGCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567382.1
CDS-3UTR CCA 90 bp GACTCCCAGCATGGGAGCATCGCCCACACTCCCATTTCTCTACGCAGTGTTTTTGTTGGACGTGTCAGCTaGGTTGACACGGGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: DSQHGSIAHTPISLRSVFVGRVS*VDTGVA
Trigger: CGCCACGCCCGTGTCAACCCAGCTGACACGTCCAAC...AAAAACACTGCGTAGAGAAATGGGAGTGTGGGCGATGCTCCCATGCTGGGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GGTAGGCGGGAGGGACCCGGAGGGCGTTCGCGACAGATGAATGGGGCTACTGGAAAGATCTTCCTTCTCTaGGCTTCCGTTTTCCAACCT +
Preference number: 4 (lower is better)
Translates to: GRREGPGGRSRQMNGATGKIFLL*ASVFQP
Trigger: AGGTTGGAAAACGGAAGCCCAGAGAAGGAAGATCTT...TCCAGTAGCCCCATTCATCTGTCGCGAACGCCCTCCGGGTCCCTCCCGCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567382.1
CDS-3UTR TCA 90 bp GCTGAAGGGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAAACCGAGCCCTGGGGATaGGGGCTCACAGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: AEGVTKSPEENITVVPKKTEPWG*GLTDPV
Trigger: CACTGGGTCTGTGAGCCCTCATCCCCAGGGCTCGGT...TTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCCCTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp CGAAACAAACAAACACGGTCCACATCGATCCTGAGACAACTTCCTGGGATCAGGGGCTGGGGAGGCCGCTaGGACTCAAAGCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RNKQTRSTSILRQLPGIRGWGGR*DSKLRV
Trigger: GACCCTGAGCTTTGAGTCGCAGCGGCCTCCCCAGCC...CCTGATCCCAGGAAGTTGTCTCAGGATCGATGTGGACCGTGTTTGTTTGTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567382.1
CDS-3UTR CCA 90 bp CACTGCGCCCGGCCGGGTCTTGCTCTTAGTTTTACTGAGGTGCAGAATTTACTCCTCTGTCACCCCGGCTaGAGTGGAGTCGTCCGATCA +
Preference number: 4 (lower is better)
Translates to: HCARPGLALSFTEVQNLLLCHPG*SGVVRS
Trigger: TGATCGGACGACTCCACTCCAGCCGGGGTGACAGAG...GAGTAAATTCTGCACCTCAGTAAAACTAAGAGCAAGACCCGGCCGGGCGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp CTAGGTAGGGCCTGGGGATCTACATTTCCAGCACGTTCCCAGGGGATTCTGATGGGGTTGACACGGGCGTaGCGGAATCCCATGGAACTT +
Preference number: 4 (lower is better)
Translates to: LGRAWGSTFPARSQGILMGLTRA*RNPMEL
Trigger: AAGTTCCATGGGATTCCGCCACGCCCGTGTCAACCC...CATCAGAATCCCCTGGGAACGTGCTGGAAATGTAGATCCCCAGGCCCTACCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp ATTTCTGCCTCTGGACAGCTGTGCGGCCTTCAGCAAGATCTTCCTTCTCTGGGCCCCCATTTCTGCCTCTaGACAGCTGTGCGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: ISASGQLCGLQQDLPSLGPHFCL*TAVRPS
Trigger: TGAAGGCCGCACAGCTGTCCAGAGGCAGAAATGGGG...GCCCAGAGAAGGAAGATCTTGCTGAAGGCCGCACAGCTGTCCAGAGGCAGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567382.1
CDS-3UTR CCA 90 bp CTAGGTAGGGCCTGGGGATCTACATTTCCAGCACGTTCCCAGGGGATTCTGATGATGAACACTGCTGTCTaGGCCCACCCATGGGGATTC +
Preference number: 4 (lower is better)
Translates to: LGRAWGSTFPARSQGILMMNTAV*AHPWGF
Trigger: GAATCCCCATGGGTGGGCCCAGACAGCAGTGTTCAT...CATCAGAATCCCCTGGGAACGTGCTGGAAATGTAGATCCCCAGGCCCTACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp TTTCTGCCTCTGGACAGCTGTGCGGCCTTCAGCAAGATCTTCCTTCTCTGGGCTCCTGAGACAACTTCCTaGGATCAGGACGCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: FLPLDSCAAFSKIFLLWAPETTS*DQDASP
Trigger: AGGGCTTGCGTCCTGATCCCAGGAAGTTGTCTCAGG...AGCCCAGAGAAGGAAGATCTTGCTGAAGGCCGCACAGCTGTCCAGAGGCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567382.1
CDS-3UTR TCA 90 bp CACTGCGCCCGGCCGGGTCTTGCTCTTAGTTTTACTGAGGTGCAGAATTTACTCCATCATTACCAGCTGTaGCCTTGTGCCCCTGACTCC +
Preference number: 4 (lower is better)
Translates to: HCARPGLALSFTEVQNLLHHYQL*PCAPDS
Trigger: GGAGTCAGGGGCACAAGGTCACAGCTGGTAATGATG...GAGTAAATTCTGCACCTCAGTAAAACTAAGAGCAAGACCCGGCCGGGCGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp AATGTCTGGCAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGACAGCCTGGACAGCTaGGATTCGGAGCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: NVWQSGWQGTMSGVSDSRDSLDS*DSELSS
Trigger: TGAGCTGAGCTCCGAATCTCAGCTGTCCAGGCTGTC...TCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTGCCAGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp CAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGAGAGTTTCTATGGGGACGTGTCAGCTGGGTTaGCACGGGCGTGGCGGAATC +
Preference number: 4 (lower is better)
Translates to: QCLGSVIPEFLCQRVSMGTCQLG*HGRGGI
Trigger: GATTCCGCCACGCCCGTGTCAACCCAGCTGACACGT...CCCCATAGAAACTCTCTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp CACTGCGCCCGGCCGGGTCTTGCTCTTAGTTTTACTGAGGTGCAGAATTTACTCCGCTGTTTTCCTTGGTaGGAGGGCCCCCATACTCAT +
Preference number: 4 (lower is better)
Translates to: HCARPGLALSFTEVQNLLRCFPW*EGPHTH
Trigger: ATGAGTATGGGGGCCCTCGCACCAAGGAAAACAGCG...GAGTAAATTCTGCACCTCAGTAAAACTAAGAGCAAGACCCGGCCGGGCGCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp CGAAACAAACAAACACGGTCCACATCGATCCTGAGACAACTTCCTGGGATCAGGGATGAATGGGGCTACTaGAAGGGGTCGGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RNKQTRSTSILRQLPGIRDEWGY*KGSGLG
Trigger: CCCCAAGCCCGACCCCTTCCAGTAGCCCCATTCATC...CCTGATCCCAGGAAGTTGTCTCAGGATCGATGTGGACCGTGTTTGTTTGTTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567382.1
3UTR CAA 72 bp TGTGAGGGTTCTGTGGTGCTGCCCAGTTTTGGGCCTTaGAACTGCTCCCCAGGTGATTCTAATGTGCCACCA +
Preference number: 4 (lower is better)
Translates to: CEGSVVLPSFGP*NCSPGDSNVPP
Trigger: TGGTGGCACATTAGAATCACCTGGGGAGCAGTTCAAAGGCCCAAAACTGGGCAGCACCACAGAACCCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp GGTGAATTACATCATCGGACGGTTCGCAGTAGACAGGCCTTCTTGAATGCAGTTGCCACTTCCGAGGCTTaGGAACATCACCAGGGACGC +
Preference number: 4 (lower is better)
Translates to: GELHHRTVRSRQAFLNAVATSEA*EHHQGR
Trigger: GCGTCCCTGGTGATGTTCTCAAGCCTCGGAAGTGGC...AACTGCATTCAAGAAGGCCTGTCTACTGCGAACCGTCCGATGATGTAATTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp GGCAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGAAGAAAGGCATTCTCTaGCCGGATGCACCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRVDGREQCLGSVIPEFLKKGIL*PDAPRW
Trigger: CCACCTGGGTGCATCCGGTCAGAGAATGCCTTTCTT...CAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp GCCTGGGCAACACAGCAAGACCCAGGTGCGGTGGCACGAACCTGTAATATTAGCACACATGGATTGAATTaGATGCCAGGTAACGGGGGT +
Preference number: 4 (lower is better)
Translates to: AWATQQDPGAVARTCNISTHGLN*MPGNGG
Trigger: ACCCCCGTTACCTGGCATTCAATTCAATCCATGTGT...GCTAATATTACAGGTTCGTGCCACCGCACCTGGGTCTTGCTGTGTTGCCCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp AATGTCTGGCAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGATACAGGGTCGTCTGCTaGAGGGGTTACGAAGAGTCC +
Preference number: 4 (lower is better)
Translates to: NVWQSGWQGTMSGVSDSRYRVVC*RGYEES
Trigger: GGACTCTTCGTAACCCCTTCAGCAGACGACCCTGTA...TCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTGCCAGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp GACTCCCAGCATGGGAGCATCGCCCACACTCCCATTTCTCTACGCAGTGTTTTTCTGCCAGAACTTCAGTaGCTTAGGTGCCGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: DSQHGSIAHTPISLRSVFLPELQ*LRCRCK
Trigger: TTTGCAGCGGCACCTAAGTCACTGAAGTTCTGGCAG...AAAAACACTGCGTAGAGAAATGGGAGTGTGGGCGATGCTCCCATGCTGGGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp TGTTCTCTTATGTCTCCACCTCTGAGGGTCCGGAAACTATCAGCAGAACCGTTATCGGGGGCTCCAGCCTaGATCACAACCTACTGGCCT +
Preference number: 4 (lower is better)
Translates to: CSLMSPPLRVRKLSAEPLSGAPA*ITTYWP
Trigger: AGGCCAGTAGGTTGTGATGCAGGCTGGAGCCCCCGA...TAACGGTTCTGCTGATAGTTTCCGGACCCTCAGAGGTGGAGACATAAGAGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp CACTGCGCCCGGCCGGGTCTTGCTCTTAGTTTTACTGAGGTGCAGAATTTACTCGATTTCCAGACAGCCTaGACAGCTGAGATTCGGAGC +
Preference number: 4 (lower is better)
Translates to: HCARPGLALSFTEVQNLLDFQTA*TAEIRS
Trigger: GCTCCGAATCTCAGCTGTCCAGGCTGTCTGGAAATC...GAGTAAATTCTGCACCTCAGTAAAACTAAGAGCAAGACCCGGCCGGGCGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp CAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGGGCTGTGCCACTCTTTaGGGTGAGGGTTGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: QSGWQGTMSGVSDSRVFVGCATL*GEGCPV
Trigger: CACAGGACAACCCTCACCCCAAAGAGTGGCACAGCC...CACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp TGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGAGAGTGGTGCTGCCCAGTTTTaGGCCTTTGAACTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: WQGTMSGVSDSRVFVPESGAAQF*AFELLP
Trigger: GGGGAGCAGTTCAAAGGCCCAAAACTGGGCAGCACC...ACTCTCTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGGTCTGGCAGAGTGGATaGCAGGGAACAATGTCTGGG +
Preference number: 4 (lower is better)
Translates to: VDGREQCLGSVIPEFLCQVWQSG*QGTMSG
Trigger: CCCAGACATTGTTCCCTGCCATCCACTCTGCCAGAC...CTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
3UTR CAA 72 bp TTACATCATCGGACGGTTCGCAGTAGACAGGCCTTCTaGAATGCAGTTCTCGACCTCGACTGCACACTGGAG +
Preference number: 4 (lower is better)
Translates to: LHHRTVRSRQAF*NAVLDLDCTLE
Trigger: CTCCAGTGTGCAGTCGAGGTCGAGAACTGCATTCAAGAAGGCCTGTCTACTGCGAACCGTCCGATGATGTAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp TTCCAGACAAGGATTCTGATAGGAAACCGAGCCCTGGGGATGAGGGCTCACAGATTCTGGGAACACACCTaGGACAAGTCTCCTGCAATG +
Preference number: 4 (lower is better)
Translates to: FQTRILIGNRALGMRAHRFWEHT*DKSPAM
Trigger: CATTGCAGGAGACTTGTCTCAGGTGTGTTCCCAGAA...TCTGTGAGCCCTCATCCCCAGGGCTCGGTTTCCTATCAGAATCCTTGTCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp CAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGAGAGTTTCTATGGGGCAACCTCAGCACTGTTaGCACTTGGGGCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: QCLGSVIPEFLCQRVSMGQPQHC*HLGLCH
Trigger: GTGGCACAGCCCCAAGTGTCAACAGTGCTGAGGTTG...CCCCATAGAAACTCTCTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp GCCTGGGCAACACAGCAAGACCCAGGTGCGGTGGCACGAACCTGTAATATTAGCGGAGGTTTTGAAGGCTaGTTAGAGGGAGATGAATTC +
Preference number: 4 (lower is better)
Translates to: AWATQQDPGAVARTCNISGGFEG*LEGDEF
Trigger: GAATTCATCTCCCTCTAATCAGCCTTCAAAACCTCC...GCTAATATTACAGGTTCGTGCCACCGCACCTGGGTCTTGCTGTGTTGCCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp CAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCTCGCATCTCCTTCTaGGGATGCTGGCAAAATGCG +
Preference number: 4 (lower is better)
Translates to: QSGWQGTMSGVSDSRVFVPRISF*GCWQNA
Trigger: CGCATTTTGCCAGCATCCTCAGAAGGAGATGCGAGG...CACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR GCA 90 bp AAGGCAGAAGAGGTCACACTAGGTCCTAGAGCGTGGACGTTCTGGGTAATTAAGCAACACCCCCTCTCCTaGTTTGCCTTGGGCTACTTG +
Preference number: 4 (lower is better)
Translates to: KAEEVTLGPRAWTFWVIKQHPLS*FALGYL
Trigger: CAAGTAGCCCAAGGCAAAGCAGGAGAGGGGGTGTTG...CTTAATTACCCAGAACGTCCACGCTCTAGGACCTAGTGTGACCTCTTCTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp GTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGACAAGTCTCCTGCAATaGCAGTCTTGGCAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: VDGREQCLGSVIPEFLCQTSLLQ*QSWQAL
Trigger: GAGGGCTTGCCAAGACTGGCATTGCAGGAGACTTGT...CTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp GTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGTGGCTCAACCTATCATaGGGGTCCTGTTTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VDGREQCLGSVIPEFLCQWLNLS*GSCLPG
Trigger: TCCTGGCAAACAGGACCCGCATGATAGGTTGAGCCA...CTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp GCCTGGGCAACACAGCAAGACCCAGGTGCGGTGGCACGAACCTGTAATATTAGCTTTGGGCCTTTGAACTaGTCCCCAGGTGATTCTAAT +
Preference number: 4 (lower is better)
Translates to: AWATQQDPGAVARTCNISFGPLN*SPGDSN
Trigger: ATTAGAATCACCTGGGGAGCAGTTCAAAGGCCCAAA...GCTAATATTACAGGTTCGTGCCACCGCACCTGGGTCTTGCTGTGTTGCCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp CAGGTTCTAATTGAGGCGCACCTGAGCCTGGCTTGCAGGAGAGATACCTATCAAGGGGTTTCGCCATGTTaGCCAGGCTGGTTTAGAACT +
Preference number: 4 (lower is better)
Translates to: QVLIEAHLSLACRRDTYQGVSPC*PGWFRT
Trigger: AGTTCTAAACCAGCCTGGCCAACATGGCGAAACCCC...TTGATAGGTATCTCTCCTGCAAGCCAGGCTCAGGTGCGCCTCAATTAGAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GACTCCCAGCATGGGAGCATCGCCCACACTCCCATTTCTCTACGCAGTGTTTTTTGGGACACAAATTGTTaGGGCATGCGTGACACATGG +
Preference number: 4 (lower is better)
Translates to: DSQHGSIAHTPISLRSVFWDTNC*GMRDTW
Trigger: CCATGTGTCACGCATGCCCCAACAATTTGTGTCCCA...AAAAACACTGCGTAGAGAAATGGGAGTGTGGGCGATGCTCCCATGCTGGGAGTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp AGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGGGCTAGGTAGGGCCTaGGGATCTACATTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SGWQGTMSGVSDSRVFVPGLGRA*GSTFPA
Trigger: TGCTGGAAATGTAGATCCCCAGGCCCTACCTAGCCC...TGGCACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp CAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGGATGCCCGAAGGCCCTaGCTCTCTCACTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: QSGWQGTMSGVSDSRVFVDARRP*LSHSQN
Trigger: ATTCTGAGAGTGAGAGAGCCAGGGCCTTCGGGCATC...CACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp AGGTCTGTAGCAAACACTGTAGGTTGTCCACCCGATAGCCATTCTGATTTCCTTTGCCACTCTTTGGGGTaGGGGTTGTCCTGTGCATGG +
Preference number: 4 (lower is better)
Translates to: RSVANTVGCPPDSHSDFLCHSLG*GLSCAW
Trigger: CCATGCACAGGACAACCCTCACCCCAAAGAGTGGCA...AAGGAAATCAGAATGGCTATCGGGTGGACAACCTACAGTGTTTGCTACAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp TGTTCTCTTATGTCTCCACCTCTGAGGGTCCGGAAACTATCAGCAGAACCGTTACCTCGCATCTCCTTCTaGGGATGCTGGCAAAATGCG +
Preference number: 4 (lower is better)
Translates to: CSLMSPPLRVRKLSAEPLPRISF*GCWQNA
Trigger: CGCATTTTGCCAGCATCCTCAGAAGGAGATGCGAGG...TAACGGTTCTGCTGATAGTTTCCGGACCCTCAGAGGTGGAGACATAAGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp AAGGCAGAAGAGGTCACACTAGGTCCTAGAGCGTGGACGTTCTGGGTAATTAAGCCCCCTCTCCTGCTTTaGCTTGGGCTACTTGTACTT +
Preference number: 4 (lower is better)
Translates to: KAEEVTLGPRAWTFWVIKPPLLL*LGLLVL
Trigger: AAGTACAAGTAGCCCAAGGCAAAGCAGGAGAGGGGG...CTTAATTACCCAGAACGTCCACGCTCTAGGACCTAGTGTGACCTCTTCTGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GCAGGGCAGCATCTACACGATAGGTATGTAGTTCATGTATGTGGTGTCTACATACTGCAATGCCAGTCTTaGCAAGCCCTCCTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: AGQHLHDRYVVHVCGVYILQCQS*QALLPL
Trigger: GAGCGGGAGGAGGGCTTGCCAAGACTGGCATTGCAG...TATGTAGACACCACATACATGAACTACATACCTATCGTGTAGATGCTGCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GCCTGGGCAACACAGCAAGACCCAGGTGCGGTGGCACGAACCTGTAATATTAGCAACACAGTGTCTGCTTaGGAAGGCTTCCATTTACAA +
Preference number: 4 (lower is better)
Translates to: AWATQQDPGAVARTCNISNTVSA*EGFHLQ
Trigger: TTGTAAATGGAAGCCTTCCCAAGCAGACACTGTGTT...GCTAATATTACAGGTTCGTGCCACCGCACCTGGGTCTTGCTGTGTTGCCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp CTAGGTAGGGCCTGGGGATCTACATTTCCAGCACGTTCCCAGGGGATTCTGATGACGCTTCTAAGCTGCTaGATCCTGAATCCAGACTAT +
Preference number: 4 (lower is better)
Translates to: LGRAWGSTFPARSQGILMTLLSC*ILNPDY
Trigger: ATAGTCTGGATTCAGGATCCAGCAGCTTAGAAGCGT...CATCAGAATCCCCTGGGAACGTGCTGGAAATGTAGATCCCCAGGCCCTACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp TCCAAGTTTGAGAAAATGAGAGTGGCCCAGGAAAAGAATCTTCCTCGCATCTCCGCTTCAGGCTCCAAGTaGGCTATGACTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SKFEKMRVAQEKNLPRISASGSK*AMTVPL
Trigger: CAGTGGCACAGTCATAGCTCACTTGGAGCCTGAAGC...GGAGATGCGAGGAAGATTCTTTTCCTGGGCCACTCTCATTTTCTCAAACTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp ATTCCCCGTGGTTGTGCTCTGGGCAAATGTTTGAGGAATGTCATTTGTTTCTGTCGGGGGTCAAAGCCCTaGTTGTCCAAGTTGGACGTG +
Preference number: 4 (lower is better)
Translates to: IPRGCALGKCLRNVICFCRGSKP*LSKLDV
Trigger: CACGTCCAACTTGGACAATCAGGGCTTTGACCCCCG...ACAGAAACAAATGACATTCCTCAAACATTTGCCCAGAGCACAACCACGGGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp GGTCCAGTCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTGTTCCCAGGGGATTCTaGTGCTGCCGGTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GPVLCLNKILEQNQSNGLVPRGF*CCRFRN
Trigger: GTTCCTGAACCGGCAGCATCAGAATCCCCTGGGAAC...AAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGACTGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp CTTCAAGTTCTGAACTTGCTAAACGGTAACTTGTTGGAAGCATTACTAGCAAATCCCTCGCCCCAAGGTTaGTGCCCGAAGGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LQVLNLLNGNLLEALLANPSPQG*CPKALA
Trigger: AGCCAGGGCCTTCGGGCATCAACCTTGGGGCGAGGG...ATTTGCTAGTAATGCTTCCAACAAGTTACCGTTTAGCAAGTTCAGAACTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp GCTGAAGGGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAACATGCGGGTCCTGTTTaGCAGGATCATTTTAGGCAC +
Preference number: 4 (lower is better)
Translates to: AEGVTKSPEENITVVPKKHAGPV*QDHFRH
Trigger: GTGCCTAAAATGATCCTGGCAAACAGGACCCGCATG...TTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCCCTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp TGCAGGAGAGATACCTATCAAAGGGAAAGGCTGATTTCTTTTGAGGGCATTGTTGGCTCACAGACCCAGTaGCGACCCACGGTAACCATG +
Preference number: 4 (lower is better)
Translates to: CRRDTYQRERLISFEGIVGSQTQ*RPTVTM
Trigger: CATGGTTACCGTGGGTCGGCACTGGGTCTGTGAGCC...AACAATGCCCTCAAAAGAAATCAGCCTTTCCCTTTGATAGGTATCTCTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CCA 90 bp GTCCAGTCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTAATGCTGCAGTGTGTGTaGGGCATTCGGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VQSFASIRFWSRISQMVLMLQCV*GIRGLQ
Trigger: CTGGAGCCCCCGAATGCCCCACACACACTGCAGCAT...TAAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGACTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp TGTTCTCTTATGTCTCCACCTCTGAGGGTCCGGAAACTATCAGCAGAACCGTTAAGCACTGTTGACACTTaGGGCTGTGCCACTCTTTGG +
Preference number: 4 (lower is better)
Translates to: CSLMSPPLRVRKLSAEPLSTVDT*GCATLW
Trigger: CCAAAGAGTGGCACAGCCCCAAGTGTCAACAGTGCT...TAACGGTTCTGCTGATAGTTTCCGGACCCTCAGAGGTGGAGACATAAGAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp CCAGACAAGGATTCTGATAGGAAACCGAGCCCTGGGGATGAGGGCTCACAGACCGCCTCAATAAGATTCTaGAGCAGAATCAGTCAAATG +
Preference number: 4 (lower is better)
Translates to: PDKDSDRKPSPGDEGSQTASIRF*SRISQM
Trigger: CATTTGACTGATTCTGCTCCAGAATCTTATTGAGGC...GGTCTGTGAGCCCTCATCCCCAGGGCTCGGTTTCCTATCAGAATCCTTGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR TCA 90 bp AGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCACTGGCACTGCATTTTTaGGTGGCCAGAGATAAAGGT +
Preference number: 4 (lower is better)
Translates to: SGWQGTMSGVSDSRVFVPLALHF*VARDKG
Trigger: ACCTTTATCTCTGGCCACTCAAAAATGCAGTGCCAG...TGGCACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp AGAAATCCTTTGATTCAAACAGTTGGGACACAAATTGTTGGGGCATGCGTGACAGCAGGTGTGCAGCTGTaGGGACATTCCAGGGTCATC +
Preference number: 4 (lower is better)
Translates to: RNPLIQTVGTQIVGACVTAGVQL*GHSRVI
Trigger: GATGACCCTGGAATGTCCTCACAGCTGCACACCTGC...TGTCACGCATGCCCCAACAATTTGTGTCCCAACTGTTTGAATCAAAGGATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp CTAGGTAGGGCCTGGGGATCTACATTTCCAGCACGTTCCCAGGGGATTCTGATGTTTGCAAGACCAACGTaGCTAAATGGTCAAATTCTG +
Preference number: 4 (lower is better)
Translates to: LGRAWGSTFPARSQGILMFARPT*LNGQIL
Trigger: CAGAATTTGACCATTTAGTCACGTTGGTCTTGCAAA...CATCAGAATCCCCTGGGAACGTGCTGGAAATGTAGATCCCCAGGCCCTACCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp CAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGAGAGTTTCTATGGGGTTATGTCTCCACCTCTaGGGGTCCGGAAACTATCAG +
Preference number: 4 (lower is better)
Translates to: QCLGSVIPEFLCQRVSMGLCLHL*GSGNYQ
Trigger: CTGATAGTTTCCGGACCCTCAGAGGTGGAGACATAA...CCCCATAGAAACTCTCTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp GCTGAAGGGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAACCTCTGAGCAGTGAATaGGATGATACAGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: AEGVTKSPEENITVVPKKPLSSE*DDTGES
Trigger: GCTTTCACCTGTATCATCTCATTCACTGCTCAGAGG...TTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCCCTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp CAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGGCTTTCGAGAGCCTCTaGGCAGTGAATGAGATGATA +
Preference number: 4 (lower is better)
Translates to: QSGWQGTMSGVSDSRVFVAFESL*AVNEMI
Trigger: TATCATCTCATTCACTGCTCAGAGGCTCTCGAAAGC...CACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp CACTGCGCCCGGCCGGGTCTTGCTCTTAGTTTTACTGAGGTGCAGAATTTACTCTACAAATGGAGGTTTTaGAGGCTGATTAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: HCARPGLALSFTEVQNLLYKWRF*RLIRGR
Trigger: TCTCCCTCTAATCAGCCTTCAAAACCTCCATTTGTA...GAGTAAATTCTGCACCTCAGTAAAACTAAGAGCAAGACCCGGCCGGGCGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp TCCAAGTTTGAGAAAATGAGAGTGGCCCAGGAAAAGAATCTTCCTCGCATCTCCGAGGAGGTCGACTCCTaGCTAAGTCACAACTCTCCT +
Preference number: 4 (lower is better)
Translates to: SKFEKMRVAQEKNLPRISEEVDS*LSHNSP
Trigger: AGGAGAGTTGTGACTTAGGCAGGAGTCGACCTCCTC...GGAGATGCGAGGAAGATTCTTTTCCTGGGCCACTCTCATTTTCTCAAACTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp TGCAGGAGAGATACCTATCAAAGGGAAAGGCTGATTTCTTTTGAGGGCATTGTTTACTCGCCCCAGAGCTaGCCTCCCTTGGGACTTCTT +
Preference number: 4 (lower is better)
Translates to: CRRDTYQRERLISFEGIVYSPQS*PPLGLL
Trigger: AAGAAGTCCCAAGGGAGGGCAGCTCTGGGGCGAGTA...AACAATGCCCTCAAAAGAAATCAGCCTTTCCCTTTGATAGGTATCTCTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp AGAAATCCTTTGATTCAAACAGTTGGGACACAAATTGTTGGGGCATGCGTGACAGAAGCTGTGGGGCCTTaGGGTTTGAGACAGGGCACT +
Preference number: 4 (lower is better)
Translates to: RNPLIQTVGTQIVGACVTEAVGP*GLRQGT
Trigger: AGTGCCCTGTCTCAAACCCCAAGGCCCCACAGCTTC...TGTCACGCATGCCCCAACAATTTGTGTCCCAACTGTTTGAATCAAAGGATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGAAAACAAGAACCACATaGCTCAACCTATCATGCGGG +
Preference number: 4 (lower is better)
Translates to: VDGREQCLGSVIPEFLCQKTRTT*LNLSCG
Trigger: CCCGCATGATAGGTTGAGCCATGTGGTTCTTGTTTT...CTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp TCCAAGTTTGAGAAAATGAGAGTGGCCCAGGAAAAGAATCTTCCTCGCATCTCCAATCGTTCCATTACTTaGGGAGGTCGACTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SKFEKMRVAQEKNLPRISNRSIT*GGRLLP
Trigger: AGGCAGGAGTCGACCTCCTCAAGTAATGGAACGATT...GGAGATGCGAGGAAGATTCTTTTCCTGGGCCACTCTCATTTTCTCAAACTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp GGCAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGCCGTCCCAGATATTCTaGATCAGGATCTACAAAAAG +
Preference number: 4 (lower is better)
Translates to: GRVDGREQCLGSVIPEFLPSQIF*IRIYKK
Trigger: CTTTTTGTAGATCCTGATTCAGAATATCTGGGACGG...CAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp GGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAAGACCTTAGAGGAACACAGTGTCTaGTTGGGAAGGCTTCCATTT +
Preference number: 4 (lower is better)
Translates to: GLRRVQKRTSRWFPRKTLEEHSV*LGRLPF
Trigger: AAATGGAAGCCTTCCCAAGCAGACACTGTGTTCCTC...TAAGGTCTTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp GTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGTTGAGGGCATTGTTTTaGAGCATTTCCTGGACTTAC +
Preference number: 4 (lower is better)
Translates to: VDGREQCLGSVIPEFLCQLRALF*SISWTY
Trigger: GTAAGTCCAGGAAATGCTGCAAAACAATGCCCTCAA...CTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR GCA 90 bp AATGTCTGGCAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGATTGAGGGCATTGTTTTaGAGCATTTCCTGGACTTAC +
Preference number: 4 (lower is better)
Translates to: NVWQSGWQGTMSGVSDSRLRALF*SISWTY
Trigger: GTAAGTCCAGGAAATGCTGCAAAACAATGCCCTCAA...TCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTGCCAGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR GCA 90 bp GTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGATTCCAGAGTTTTTGTaGCAGAGAGTTTCTATGGGG +
Preference number: 4 (lower is better)
Translates to: VDGREQCLGSVIPEFLCQIPEFL*QRVSMG
Trigger: CCCCATAGAAACTCTCTGGCACAAAAACTCTGGAAT...CTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CCA 90 bp GCTGAAGGGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAACTAAGTGTGTGTGTGTaGGGCTTAAATTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: AEGVTKSPEENITVVPKKLSVCV*GLNSKD
Trigger: GTCCTTGGAATTTAAGCCCCACACACACACACTTAG...TTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCCCTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp TGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGAGAGTCTCTGGTTTTGTTTTTaGGCAGTGACTTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: WQGTMSGVSDSRVFVPESLWFCF*AVTCIS
Trigger: GGAGATGCAAGTCACTGCCCAAAAACAAAACCAGAG...ACTCTCTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GGCAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGGCCAGAGAGTTTCTATaGGGTCTGTTTTTCATCATG +
Preference number: 4 (lower is better)
Translates to: GRVDGREQCLGSVIPEFLAREFL*GLFFIM
Trigger: CATGATGAAAAACAGACCCCATAGAAACTCTCTGGC...CAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR TCA 90 bp AGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAATCAAAGGGAAAGGCTaGTTTCTTTTGAGGGCATTG +
Preference number: 4 (lower is better)
Translates to: SGWQGTMSGVSDSRVFVPIKGKG*FLLRAL
Trigger: CAATGCCCTCAAAAGAAATCAGCCTTTCCCTTTGAT...TGGCACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR TCA 90 bp TATTGTTCTCTTATGTCTCCACCTCTGAGGGTCCGGAAACTATCAGCAGAACCGCCAAGTTTGAGAAAATaGGAGTGGCCCAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: YCSLMSPPLRVRKLSAEPPSLRK*EWPRKR
Trigger: TCTTTTCCTGGGCCACTCTCATTTTCTCAAACTTGG...CGGTTCTGCTGATAGTTTCCGGACCCTCAGAGGTGGAGACATAAGAGAACAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp GGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAAGACCTTAAGACTTGTCCAAGTTTaGGAAAATGAGAGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GLRRVQKRTSRWFPRKTLRLVQV*ENESGP
Trigger: TGGGCCACTCTCATTTTCTCAAACTTGGACAAGTCT...TAAGGTCTTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp TTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTCCTGAGGCAGGAGGACTaGCTGAGCCCAGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LLEALLANLVHNCSGIQVLRQED*LSPGAS
Trigger: TGAAGCTCCTGGGCTCAGGCAGTCCTCCTGCCTCAG...GACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp AGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGGAAGGTGGACATTTTaGAAGACCAACGTGACTAAA +
Preference number: 4 (lower is better)
Translates to: SGWQGTMSGVSDSRVFVPGRWTF*KTNVTK
Trigger: TTTAGTCACGTTGGTCTTGCAAAATGTCCACCTTCC...TGGCACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp GCAGGGCAGCATCTACACGATAGGTATGTAGTTCATGTATGTGGTGTCTACATAGTTCTCGACCTCGACTaGACACTGGAGTCTAAGATG +
Preference number: 4 (lower is better)
Translates to: AGQHLHDRYVVHVCGVYIVLDLD*TLESKM
Trigger: CATCTTAGACTCCAGTGTGCAGTCGAGGTCGAGAAC...TATGTAGACACCACATACATGAACTACATACCTATCGTGTAGATGCTGCCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp GGTCCAGTCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTCACCTGAGCCTGGCTTaGAGGAGAGATACCTATCAA +
Preference number: 4 (lower is better)
Translates to: GPVLCLNKILEQNQSNGLHLSLA*RRDTYQ
Trigger: TTGATAGGTATCTCTCCTGCAAGCCAGGCTCAGGTG...AAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGACTGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR GCA 90 bp CTTCAAGTTCTGAACTTGCTAAACGGTAACTTGTTGGAAGCATTACTAGCAAATGGCTCACAGACCCAGTaGCGACCCACGGTAACCATG +
Preference number: 4 (lower is better)
Translates to: LQVLNLLNGNLLEALLANGSQTQ*RPTVTM
Trigger: CATGGTTACCGTGGGTCGGCACTGGGTCTGTGAGCC...ATTTGCTAGTAATGCTTCCAACAAGTTACCGTTTAGCAAGTTCAGAACTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp CAGGTTCTAATTGAGGCGCACCTGAGCCTGGCTTGCAGGAGAGATACCTATCAACAATCACAATTCCTCTaGTTTTGTTTTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QVLIEAHLSLACRRDTYQQSQFL*FCFWAV
Trigger: CACTGCCCAAAAACAAAACCAGAGGAATTGTGATTG...TTGATAGGTATCTCTCCTGCAAGCCAGGCTCAGGTGCGCCTCAATTAGAACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp AGGTCTGTAGCAAACACTGTAGGTTGTCCACCCGATAGCCATTCTGATTTCCTTGGCATGCGTGACACATaGATTGAATTGAATGCCAGG +
Preference number: 4 (lower is better)
Translates to: RSVANTVGCPPDSHSDFLGMRDT*IELNAR
Trigger: CCTGGCATTCAATTCAATCCATGTGTCACGCATGCC...AAGGAAATCAGAATGGCTATCGGGTGGACAACCTACAGTGTTTGCTACAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp TCCAAGTTTGAGAAAATGAGAGTGGCCCAGGAAAAGAATCTTCCTCGCATCTCCAATCCAAGAAATGTCTaGCAGAGTGGATGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SKFEKMRVAQEKNLPRISNPRNV*QSGWQG
Trigger: TCCCTGCCATCCACTCTGCCAGACATTTCTTGGATT...GGAGATGCGAGGAAGATTCTTTTCCTGGGCCACTCTCATTTTCTCAAACTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CCA 90 bp CTTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTCTGAGACTCCCAGCATaGGAGCATCGCCCACACTCC +
Preference number: 4 (lower is better)
Translates to: LVGSITSKSCPQLFWNTSLRLPA*EHRPHS
Trigger: GGAGTGTGGGCGATGCTCCCATGCTGGGAGTCTCAG...ACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp AAGGCAGAAGAGGTCACACTAGGTCCTAGAGCGTGGACGTTCTGGGTAATTAAGAATTTATTAAAAATATaGATCTCCAGCCCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: KAEEVTLGPRAWTFWVIKNLLKI*ISSPRP
Trigger: GGGACGGGGGCTGGAGATTCATATTTTTAATAAATT...CTTAATTACCCAGAACGTCCACGCTCTAGGACCTAGTGTGACCTCTTCTGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp GGTAACCATGAACCTCTAAAATTCTACAAGCAAGACTGCGTACTTTTGACAGATGGATGGTCTGGTCAATaGTGCAGTGTGTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: GNHEPLKFYKQDCVLLTDGWSGQ*CSVCGA
Trigger: TGCCCCACACACACTGCAGCATTGACCAGACCATCC...ATCTGTCAAAAGTACGCAGTCTTGCTTGTAGAATTTTAGAGGTTCATGGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp GTCCAGTCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTACTGAGACAAGTCTCCTaGAATGCCAGTCTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: VQSFASIRFWSRISQMVLLRQVS*NASLGK
Trigger: CTTGCCAAGACTGGCATTGCAGGAGACTTGTCTCAG...TAAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGACTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp TGCAGGAGAGATACCTATCAAAGGGAAAGGCTGATTTCTTTTGAGGGCATTGTTCATTCTCTGACCGGATaGACCCAGGTGGAACAAATC +
Preference number: 4 (lower is better)
Translates to: CRRDTYQRERLISFEGIVHSLTG*TQVEQI
Trigger: GATTTGTTCCACCTGGGTGCATCCGGTCAGAGAATG...AACAATGCCCTCAAAAGAAATCAGCCTTTCCCTTTGATAGGTATCTCTCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp GGTGAATTACATCATCGGACGGTTCGCAGTAGACAGGCCTTCTTGAATGCAGTTCAAATTGTTGGGGCATaGGTGACACATGGATTGAAT +
Preference number: 4 (lower is better)
Translates to: GELHHRTVRSRQAFLNAVQIVGA*VTHGLN
Trigger: ATTCAATCCATGTGTCACGCATGCCCCAACAATTTG...AACTGCATTCAAGAAGGCCTGTCTACTGCGAACCGTCCGATGATGTAATTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GCAGGGCAGCATCTACACGATAGGTATGTAGTTCATGTATGTGGTGTCTACATATGCATCACAACCTACTaGCCTGATCAAAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: AGQHLHDRYVVHVCGVYICITTY*PDQRRF
Trigger: GAACCTCCTTTGATCAGGCCAGTAGGTTGTGATGCA...TATGTAGACACCACATACATGAACTACATACCTATCGTGTAGATGCTGCCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGGCAGAATCAGTCAAATaGTCTTATGTTTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VDGREQCLGSVIPEFLCQAESVK*SYVFRR
Trigger: TCTCCTGAAAACATAAGACCATTTGACTGATTCTGC...CTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CCA 90 bp CAAGCAAGACTGCGTACTTTTGACAGATGGCTTTCAAAACATTCTTTCCCTTTAGTCTGGCAGAGTGGATaGCAGGGAACAATGTCTGGG +
Preference number: 4 (lower is better)
Translates to: QARLRTFDRWLSKHSFPLVWQSG*QGTMSG
Trigger: CCCAGACATTGTTCCCTGCCATCCACTCTGCCAGAC...TAAAGGGAAAGAATGTTTTGAAAGCCATCTGTCAAAAGTACGCAGTCTTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CCA 90 bp GGTCCAGTCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTAATCCAAGAAATGTCTaGCAGAGTGGATGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GPVLCLNKILEQNQSNGLNPRNV*QSGWQG
Trigger: TCCCTGCCATCCACTCTGCCAGACATTTCTTGGATT...AAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGACTGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
3UTR CAA 72 bp CAAAGGGAAAGGCTGATTTCTTTTGAGGGCATTGTTTaGCAGCATTTCCTGGACTTACCAGTCCTAGGCTTC +
Preference number: 4 (lower is better)
Translates to: QRERLISFEGIV*QHFLDLPVLGF
Trigger: GAAGCCTAGGACTGGTAAGTCCAGGAAATGCTGCAAAACAATGCCCTCAAAAGAAATCAGCCTTTCCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR TCA 90 bp GGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAAGACCTTAATGCTAATTTCTTCATaGGGTTCACAGAATGTCGTC +
Preference number: 4 (lower is better)
Translates to: GLRRVQKRTSRWFPRKTLMLISS*GSQNVV
Trigger: GACGACATTCTGTGAACCTCATGAAGAAATTAGCAT...TAAGGTCTTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp CTTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTGCTCCAAGTGAGCTATaGCTGTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: LVGSITSKSCPQLFWNTSAPSEL*LCHCTP
Trigger: TGGAGTGCAGTGGCACAGTCATAGCTCACTTGGAGC...ACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp GGTAACCATGAACCTCTAAAATTCTACAAGCAAGACTGCGTACTTTTGACAGATGGATCCCACAGAGGCTaGTGTTGTACAGCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: GNHEPLKFYKQDCVLLTDGSHRG*CCTAFR
Trigger: CCTGAAAGCTGTACAACATCAGCCTCTGTGGGATCC...ATCTGTCAAAAGTACGCAGTCTTGCTTGTAGAATTTTAGAGGTTCATGGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp GGTCCAGTCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTCCAAGTTTGAGAAAATaGGAGTGGCCCAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: GPVLCLNKILEQNQSNGLPSLRK*EWPRKR
Trigger: TCTTTTCCTGGGCCACTCTCATTTTCTCAAACTTGG...AAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGACTGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR GCA 90 bp GGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAAGACCTTAAGGATGCTGGCAAAATaGGCATCTGATATAATCAAC +
Preference number: 4 (lower is better)
Translates to: GLRRVQKRTSRWFPRKTLRMLAK*ASDIIN
Trigger: GTTGATTATATCAGATGCGCATTTTGCCAGCATCCT...TAAGGTCTTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GGTCCAGTCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTATGAATGGGTTAAGCTaGGATTCCTCAACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GPVLCLNKILEQNQSNGLMNGLS*DSSTSA
Trigger: TGCTGAGGTTGAGGAATCCCAGCTTAACCCATTCAT...AAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGACTGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp TTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTCGATGTGAGGGTTCTGTaGTGCTGCCCAGTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: LLEALLANLVHNCSGIQVDVRVL*CCPVLG
Trigger: GCCCAAAACTGGGCAGCACCACAGAACCCTCACATC...GACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GTCCAGTCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTAAAATGTCTGGCAGAGTaGATGGCAGGGAACAATGTC +
Preference number: 4 (lower is better)
Translates to: VQSFASIRFWSRISQMVLKCLAE*MAGNNV
Trigger: GACATTGTTCCCTGCCATCCACTCTGCCAGACATTT...TAAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGACTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
3UTR CAA 72 bp ACCAATGTGAAAACCTGTGGTTCATATTCCCCGTGGTaGTGCTCTGGGCAAATGTTTGAGGAATGTCATTTG +
Preference number: 4 (lower is better)
Translates to: TNVKTCGSYSPW*CSGQMFEECHL
Trigger: CAAATGACATTCCTCAAACATTTGCCCAGAGCACAACCACGGGGAATATGAACCACAGGTTTTCACATTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp TCCAAGTTTGAGAAAATGAGAGTGGCCCAGGAAAAGAATCTTCCTCGCATCTCCGAATCAGAAATCCTTTaGTTCAAACAGTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: SKFEKMRVAQEKNLPRISESEIL*FKQLGH
Trigger: GTGTCCCAACTGTTTGAATCAAAGGATTTCTGATTC...GGAGATGCGAGGAAGATTCTTTTCCTGGGCCACTCTCATTTTCTCAAACTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp TCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTATGTTTTGCTGAATCCGGTTACTaGGTCATCACCCATCAGGGA +
Preference number: 4 (lower is better)
Translates to: SFASIRFWSRISQMVLCFAESGY*VITHQG
Trigger: TCCCTGATGGGTGATGACTCAGTAACCGGATTCAGC...AAAACATAAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp GGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAAGACCTTAAATTACGACCTCCATTaGCTTATGGGTATTTCAAAC +
Preference number: 4 (lower is better)
Translates to: GLRRVQKRTSRWFPRKTLNYDLH*LMGISN
Trigger: GTTTGAAATACCCATAAGTCAATGGAGGTCGTAATT...TAAGGTCTTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp GCAGGGCAGCATCTACACGATAGGTATGTAGTTCATGTATGTGGTGTCTACATAATTCCAGAGTTTTTGTaGCAGAGAGTTTCTATGGGG +
Preference number: 4 (lower is better)
Translates to: AGQHLHDRYVVHVCGVYIIPEFL*QRVSMG
Trigger: CCCCATAGAAACTCTCTGGCACAAAAACTCTGGAAT...TATGTAGACACCACATACATGAACTACATACCTATCGTGTAGATGCTGCCCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GGTAACCATGAACCTCTAAAATTCTACAAGCAAGACTGCGTACTTTTGACAGATAGGTTTCGGATGGTCTaGTCAATGCTGCAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GNHEPLKFYKQDCVLLTDRFRMV*SMLQCV
Trigger: CACACACTGCAGCATTGACCAGACCATCCGAAACCT...ATCTGTCAAAAGTACGCAGTCTTGCTTGTAGAATTTTAGAGGTTCATGGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp TTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTCGACGCAGGTTTCGGATaGTCTGGTCAATGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LLEALLANLVHNCSGIQVDAGFG*SGQCCS
Trigger: ACTGCAGCATTGACCAGACCATCCGAAACCTGCGTC...GACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GGTAACCATGAACCTCTAAAATTCTACAAGCAAGACTGCGTACTTTTGACAGATGGTTCATATTCCCCGTaGTTGTGCTCTGGGCAAATG +
Preference number: 4 (lower is better)
Translates to: GNHEPLKFYKQDCVLLTDGSYSP*LCSGQM
Trigger: CATTTGCCCAGAGCACAACCACGGGGAATATGAACC...ATCTGTCAAAAGTACGCAGTCTTGCTTGTAGAATTTTAGAGGTTCATGGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp ATTCCCCGTGGTTGTGCTCTGGGCAAATGTTTGAGGAATGTCATTTGTTTCTGTGCCAGAGAGTTTCTATaGGGTCTGTTTTTCATCATG +
Preference number: 4 (lower is better)
Translates to: IPRGCALGKCLRNVICFCAREFL*GLFFIM
Trigger: CATGATGAAAAACAGACCCCATAGAAACTCTCTGGC...ACAGAAACAAATGACATTCCTCAAACATTTGCCCAGAGCACAACCACGGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp TGCAGGAGAGATACCTATCAAAGGGAAAGGCTGATTTCTTTTGAGGGCATTGTTTTTGAAAGTAAATTTTaGGATCCAGCCAGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: CRRDTYQRERLISFEGIVFESKF*DPASGA
Trigger: AGCCCCACTGGCTGGATCTCAAAATTTACTTTCAAA...AACAATGCCCTCAAAAGAAATCAGCCTTTCCCTTTGATAGGTATCTCTCCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp CTTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTTTTGTTTTTGGGCAGTaGCTTGCATCTCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LVGSITSKSCPQLFWNTSFVFGQ*LASPLP
Trigger: AGGGAGGGGAGATGCAAGTCACTGCCCAAAAACAAA...ACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp TGCAGGAGAGATACCTATCAAAGGGAAAGGCTGATTTCTTTTGAGGGCATTGTTACACTTACTGGGTTTTaGCAGCAACTTGTAAAGACC +
Preference number: 4 (lower is better)
Translates to: CRRDTYQRERLISFEGIVTLTGF*QQLVKT
Trigger: GGTCTTTACAAGTTGCTGTCAAAACCCAGTAAGTGT...AACAATGCCCTCAAAAGAAATCAGCCTTTCCCTTTGATAGGTATCTCTCCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp TTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTCCACCTGAGCCTGGCTTaGAGGAGAGATACCTATCAA +
Preference number: 4 (lower is better)
Translates to: LLEALLANLVHNCSGIQVHLSLA*RRDTYQ
Trigger: TTGATAGGTATCTCTCCTGCAAGCCAGGCTCAGGTG...GACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CCA 90 bp AGAAATCCTTTGATTCAAACAGTTGGGACACAAATTGTTGGGGCATGCGTGACATCTGACACAAGACAGTaGCAGTGGTTACTTTTCATC +
Preference number: 4 (lower is better)
Translates to: RNPLIQTVGTQIVGACVTSDTRQ*QWLLFI
Trigger: GATGAAAAGTAACCACTGCCACTGTCTTGTGTCAGA...TGTCACGCATGCCCCAACAATTTGTGTCCCAACTGTTTGAATCAAAGGATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAAGACCTTAACGAACAAGAATAGCTaGAGAAGGAATACTTCATAT +
Preference number: 4 (lower is better)
Translates to: GLRRVQKRTSRWFPRKTLTNKNS*RRNTSY
Trigger: ATATGAAGTATTCCTTCTCCAGCTATTCTTGTTCGT...TAAGGTCTTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp CAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGAGAGTTTCTATGGGGTATTTTAAAATCCTGTaGCTCAAAGGAAAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: QCLGSVIPEFLCQRVSMGYFKIL*LKGKQD
Trigger: ATCCTGCTTTCCTTTGAGCCACAGGATTTTAAAATA...CCCCATAGAAACTCTCTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp AGAAATCCTTTGATTCAAACAGTTGGGACACAAATTGTTGGGGCATGCGTGACACAATGTGAAAACCTGTaGTTCATATTCCCCGTGGTT +
Preference number: 4 (lower is better)
Translates to: RNPLIQTVGTQIVGACVTQCENL*FIFPVV
Trigger: AACCACGGGGAATATGAACCACAGGTTTTCACATTG...TGTCACGCATGCCCCAACAATTTGTGTCCCAACTGTTTGAATCAAAGGATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp AGAAATCCTTTGATTCAAACAGTTGGGACACAAATTGTTGGGGCATGCGTGACATTTTATCCCCCGGGTTaGGCCTCAAGCAATAATTTT +
Preference number: 4 (lower is better)
Translates to: RNPLIQTVGTQIVGACVTFYPPG*ASSNNF
Trigger: AAAATTATTGCTTGAGGCCCAACCCGGGGGATAAAA...TGTCACGCATGCCCCAACAATTTGTGTCCCAACTGTTTGAATCAAAGGATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GCAGGGCAGCATCTACACGATAGGTATGTAGTTCATGTATGTGGTGTCTACATACAGGTGGAACAAATCTaGGGTTGGGTCTTTTTATTT +
Preference number: 4 (lower is better)
Translates to: AGQHLHDRYVVHVCGVYIQVEQI*GWVFLF
Trigger: AAATAAAAAGACCCAACCCCAGATTTGTTCCACCTG...TATGTAGACACCACATACATGAACTACATACCTATCGTGTAGATGCTGCCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp CAAGCAAGACTGCGTACTTTTGACAGATGGCTTTCAAAACATTCTTTCCCTTTATACACCAGGCTCAGGTaGTCTCATGAATGGGTTAAG +
Preference number: 4 (lower is better)
Translates to: QARLRTFDRWLSKHSFPLYTRLR*SHEWVK
Trigger: CTTAACCCATTCATGAGACCACCTGAGCCTGGTGTA...TAAAGGGAAAGAATGTTTTGAAAGCCATCTGTCAAAAGTACGCAGTCTTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GGTCCAGTCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTGCCTCAATAAGATTCTaGAGCAGAATCAGTCAAATG +
Preference number: 4 (lower is better)
Translates to: GPVLCLNKILEQNQSNGLASIRF*SRISQM
Trigger: CATTTGACTGATTCTGCTCCAGAATCTTATTGAGGC...AAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGACTGGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CCA 90 bp TATTGTTCTCTTATGTCTCCACCTCTGAGGGTCCGGAAACTATCAGCAGAACCGCGTACTTTTGACAGATaGCTTTCAAAACATTCTTTC +
Preference number: 4 (lower is better)
Translates to: YCSLMSPPLRVRKLSAEPRTFDR*LSKHSF
Trigger: GAAAGAATGTTTTGAAAGCCATCTGTCAAAAGTACG...CGGTTCTGCTGATAGTTTCCGGACCCTCAGAGGTGGAGACATAAGAGAACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GCAGGGCAGCATCTACACGATAGGTATGTAGTTCATGTATGTGGTGTCTACATAAGAGCGTGGACGTTCTaGGTAATTAAGAATCAATTC +
Preference number: 4 (lower is better)
Translates to: AGQHLHDRYVVHVCGVYIRAWTF*VIKNQF
Trigger: GAATTGATTCTTAATTACCCAGAACGTCCACGCTCT...TATGTAGACACCACATACATGAACTACATACCTATCGTGTAGATGCTGCCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CAA 72 bp GTTCATATTCCCCGTGGTTGTGCTCTGGGCAAATGTTaGAGGAATGTCATTTGTTTCTGTTGTTGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: VHIPRGCALGKC*RNVICFCCCSQ
Trigger: TTGAGAACAACAACAGAAACAAATGACATTCCTCAAACATTTGCCCAGAGCACAACCACGGGGAATATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp CTTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTCAAAGGAAAGCAGGATaGACTAGGGGCCAAATGAAG +
Preference number: 4 (lower is better)
Translates to: LVGSITSKSCPQLFWNTSQRKAG*TRGQMK
Trigger: CTTCATTTGGCCCCTAGTTCATCCTGCTTTCCTTTG...ACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp TCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTATGTTTTTCAAGAGTGTTCTTATaGGGCAGGGCAGCATCTACA +
Preference number: 4 (lower is better)
Translates to: SFASIRFWSRISQMVLCFSRVFL*GRAAST
Trigger: TGTAGATGCTGCCCTGCCTCATAAGAACACTCTTGA...AAAACATAAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp TCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTATGTTTTTCCCATGGAACTTGGTaGATTACATCATCGGACGGT +
Preference number: 4 (lower is better)
Translates to: SFASIRFWSRISQMVLCFSHGTW*ITSSDG
Trigger: ACCGTCCGATGATGTAATTCACCAAGTTCCATGGGA...AAAACATAAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp CTTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTTATTCCCCGTGGTTGTaGTCTGGGCAAATGTTTGAG +
Preference number: 4 (lower is better)
Translates to: LVGSITSKSCPQLFWNTSYSPWL*SGQMFE
Trigger: CTCAAACATTTGCCCAGAGCACAACCACGGGGAATA...ACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp GCAGGGCAGCATCTACACGATAGGTATGTAGTTCATGTATGTGGTGTCTACATATGTGGTGTCTACATATaGTTTGGTAAAATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: AGQHLHDRYVVHVCGVYICGVYI*FGKMKL
Trigger: GAGCTTCATTTTACCAAAGCATATGTAGACACCACA...TATGTAGACACCACATACATGAACTACATACCTATCGTGTAGATGCTGCCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp TCTGTTTTTCATCATGGGGAAGACAAAGTTGGGTCACAGATTATTGTTAAGACTCATGGCAGATATTTTTaGTCAGGGCAGCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: SVFHHGEDKVGSQIIVKTHGRYF*SGQPAF
Trigger: AAAGGCAGGCTGCCCTGACCAAAAATATCTGCCATG...AGTCTTAACAATAATCTGTGACCCAACTTTGTCTTCCCCATGATGAAAAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GGTCCAGTCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTTGTAGTTCATGTATGTaGTGTCTACATATGCTTTGG +
Preference number: 4 (lower is better)
Translates to: GPVLCLNKILEQNQSNGLCSSCM*CLHMLW
Trigger: CCAAAGCATATGTAGACACCACATACATGAACTACA...AAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGACTGGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp CTTCAAGTTCTGAACTTGCTAAACGGTAACTTGTTGGAAGCATTACTAGCAAATAGGTGGTCTCATGAATaGGTTAAGCTGGGATTCCTC +
Preference number: 4 (lower is better)
Translates to: LQVLNLLNGNLLEALLANRWSHE*VKLGFL
Trigger: GAGGAATCCCAGCTTAACCCATTCATGAGACCACCT...ATTTGCTAGTAATGCTTCCAACAAGTTACCGTTTAGCAAGTTCAGAACTTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp TCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTATGTTTTAAATGTCTGGCAGAGTaGATGGCAGGGAACAATGTC +
Preference number: 4 (lower is better)
Translates to: SFASIRFWSRISQMVLCFKCLAE*MAGNNV
Trigger: GACATTGTTCCCTGCCATCCACTCTGCCAGACATTT...AAAACATAAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CCA 90 bp TCTGTTTTTCATCATGGGGAAGACAAAGTTGGGTCACAGATTATTGTTAAGACTCTAGGTCCTAGAGCGTaGACGTTCTGGGTAATTAAG +
Preference number: 4 (lower is better)
Translates to: SVFHHGEDKVGSQIIVKTLGPRA*TFWVIK
Trigger: CTTAATTACCCAGAACGTCCACGCTCTAGGACCTAG...AGTCTTAACAATAATCTGTGACCCAACTTTGTCTTCCCCATGATGAAAAACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp TGCAGGAGAGATACCTATCAAAGGGAAAGGCTGATTTCTTTTGAGGGCATTGTTCTCATTTTCATTCATTaGAAAGTTCTCAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CRRDTYQRERLISFEGIVLIFIH*KVLKWL
Trigger: CAGCCACTTGAGAACTTTTCAATGAATGAAAATGAG...AACAATGCCCTCAAAAGAAATCAGCCTTTCCCTTTGATAGGTATCTCTCCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp AGAAATCCTTTGATTCAAACAGTTGGGACACAAATTGTTGGGGCATGCGTGACAAAAATACTGTCATCCTaGCTTGTTGAAACAAACCCT +
Preference number: 4 (lower is better)
Translates to: RNPLIQTVGTQIVGACVTKILSS*LVETNP
Trigger: AGGGTTTGTTTCAACAAGTCAGGATGACAGTATTTT...TGTCACGCATGCCCCAACAATTTGTGTCCCAACTGTTTGAATCAAAGGATTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp TGCAGGAGAGATACCTATCAAAGGGAAAGGCTGATTTCTTTTGAGGGCATTGTTTATGCTTTGGTAAAATaGAGCTCTGTTGATGAGACA +
Preference number: 4 (lower is better)
Translates to: CRRDTYQRERLISFEGIVYALVK*SSVDET
Trigger: TGTCTCATCAACAGAGCTTCATTTTACCAAAGCATA...AACAATGCCCTCAAAAGAAATCAGCCTTTCCCTTTGATAGGTATCTCTCCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp TCTGTTTTTCATCATGGGGAAGACAAAGTTGGGTCACAGATTATTGTTAAGACTAGACTTGTCCAAGTTTaGGAAAATGAGAGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SVFHHGEDKVGSQIIVKTRLVQV*ENESGP
Trigger: TGGGCCACTCTCATTTTCTCAAACTTGGACAAGTCT...AGTCTTAACAATAATCTGTGACCCAACTTTGTCTTCCCCATGATGAAAAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR GCA 90 bp ATTCCCCGTGGTTGTGCTCTGGGCAAATGTTTGAGGAATGTCATTTGTTTCTGTAATCTGACAATGTTATaGAAGAACCGCCAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: IPRGCALGKCLRNVICFCNLTML*KNRQSF
Trigger: AAAACTTTGGCGGTTCTTGCATAACATTGTCAGATT...ACAGAAACAAATGACATTCCTCAAACATTTGCCCAGAGCACAACCACGGGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp GCAGGGCAGCATCTACACGATAGGTATGTAGTTCATGTATGTGGTGTCTACATATGTAGGGTTGATAAGTaGAATGTTCAATCACAATTC +
Preference number: 4 (lower is better)
Translates to: AGQHLHDRYVVHVCGVYICRVDK*NVQSQF
Trigger: GAATTGTGATTGAACATTGCACTTATCAACCCTACA...TATGTAGACACCACATACATGAACTACATACCTATCGTGTAGATGCTGCCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp CAAGCAAGACTGCGTACTTTTGACAGATGGCTTTCAAAACATTCTTTCCCTTTATTAGTTTTACTGAGGTaGAGAATTTACTCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: QARLRTFDRWLSKHSFPLLVLLR*RIYSPQ
Trigger: CTGGGGCGAGTAAATTCTGCACCTCAGTAAAACTAA...TAAAGGGAAAGAATGTTTTGAAAGCCATCTGTCAAAAGTACGCAGTCTTGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp TGCAGGAGAGATACCTATCAAAGGGAAAGGCTGATTTCTTTTGAGGGCATTGTTGCAGAATCAGTCAAATaGTCTTATGTTTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: CRRDTYQRERLISFEGIVAESVK*SYVFRR
Trigger: TCTCCTGAAAACATAAGACCATTTGACTGATTCTGC...AACAATGCCCTCAAAAGAAATCAGCCTTTCCCTTTGATAGGTATCTCTCCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CCA 90 bp GGTAACCATGAACCTCTAAAATTCTACAAGCAAGACTGCGTACTTTTGACAGATAAGAGAACATCACGGTaGTTCCCAAGAAAGACCTTA +
Preference number: 4 (lower is better)
Translates to: GNHEPLKFYKQDCVLLTDKRTSR*FPRKTL
Trigger: TAAGGTCTTTCTTGGGAACCACCGTGATGTTCTCTT...ATCTGTCAAAAGTACGCAGTCTTGCTTGTAGAATTTTAGAGGTTCATGGTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp TCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTATGTTTTCTGATTAGAGGGAGATaGATTCCAGCTGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: SFASIRFWSRISQMVLCFLIRGR*IPAGKL
Trigger: AAGTTTTCCAGCTGGAATTCATCTCCCTCTAATCAG...AAAACATAAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp TCTGTTTTTCATCATGGGGAAGACAAAGTTGGGTCACAGATTATTGTTAAGACTATCAAAGGGAAAGGCTaGTTTCTTTTGAGGGCATTG +
Preference number: 4 (lower is better)
Translates to: SVFHHGEDKVGSQIIVKTIKGKG*FLLRAL
Trigger: CAATGCCCTCAAAAGAAATCAGCCTTTCCCTTTGAT...AGTCTTAACAATAATCTGTGACCCAACTTTGTCTTCCCCATGATGAAAAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CCA 90 bp CAAGCAAGACTGCGTACTTTTGACAGATGGCTTTCAAAACATTCTTTCCCTTTATTTGATTCAAACAGTTaGGACACAAATTGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: QARLRTFDRWLSKHSFPLFDSNS*DTNCWG
Trigger: GCCCCAACAATTTGTGTCCCAACTGTTTGAATCAAA...TAAAGGGAAAGAATGTTTTGAAAGCCATCTGTCAAAAGTACGCAGTCTTGCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433866.7
3UTR CAA 72 bp AATCTTGTCCACAATTGTTCTGGAATACAAGTCAGCTaGAATAAATCCAAGAAATGTCTGGCAGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: NLVHNCSGIQVS*NKSKKCLAEWM
Trigger: CATCCACTCTGCCAGACATTTCTTGGATTTATTCAAGCTGACTTGTATTCCAGAACAATTGTGGACAAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
3UTR CAA 72 bp AGCGTTAGGATAAAAGGGATTCTTCAAGTTCTGAACTaGCTAAACGGTAACTTGTTGGAAGCATTACTAGCA +
Preference number: 4 (lower is better)
Translates to: SVRIKGILQVLN*LNGNLLEALLA
Trigger: TGCTAGTAATGCTTCCAACAAGTTACCGTTTAGCAAGTTCAGAACTTGAAGAATCCCTTTTATCCTAACGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp TCTGTTTTTCATCATGGGGAAGACAAAGTTGGGTCACAGATTATTGTTAAGACTGTGATGGCTTCTTCATaGGTCCATTTAAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SVFHHGEDKVGSQIIVKTVMASS*VHLKVF
Trigger: GAAGACTTTTAAATGGACTCATGAAGAAGCCATCAC...AGTCTTAACAATAATCTGTGACCCAACTTTGTCTTCCCCATGATGAAAAACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp TTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTCCGAAGATTATTATTGTaGAGCAGGACAGTCAAGAGT +
Preference number: 4 (lower is better)
Translates to: LLEALLANLVHNCSGIQVRRLLL*SRTVKS
Trigger: ACTCTTGACTGTCCTGCTTCACAATAATAATCTTCG...GACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR GCA 90 bp CTTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTAGGATGCTGGCAAAATaGGCATCTGATATAATCAAC +
Preference number: 4 (lower is better)
Translates to: LVGSITSKSCPQLFWNTSRMLAK*ASDIIN
Trigger: GTTGATTATATCAGATGCGCATTTTGCCAGCATCCT...ACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR GCA 90 bp CTTCAAGTTCTGAACTTGCTAAACGGTAACTTGTTGGAAGCATTACTAGCAAATCAGGAGAATGAATTCTaGCAGAACTTCAGTGACTTA +
Preference number: 4 (lower is better)
Translates to: LQVLNLLNGNLLEALLANQENEF*QNFSDL
Trigger: TAAGTCACTGAAGTTCTGGCAGAATTCATTCTCCTG...ATTTGCTAGTAATGCTTCCAACAAGTTACCGTTTAGCAAGTTCAGAACTTGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp TTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTCCAAGAGAATCTTCACTaGCTGGTAAACGAACAAGAA +
Preference number: 4 (lower is better)
Translates to: LLEALLANLVHNCSGIQVQENLH*LVNEQE
Trigger: TTCTTGTTCGTTTACCAGCCAGTGAAGATTCTCTTG...GACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp CTTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTTGTGCCACCACACTCTaGGCTAATTTTTCTACTTTT +
Preference number: 4 (lower is better)
Translates to: LVGSITSKSCPQLFWNTSCATTL*ANFSTF
Trigger: AAAAGTAGAAAAATTAGCCCAGAGTGTGGTGGCACA...ACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR TCA 90 bp CTTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTGTTGATACTCTAATGTaGTTTCTGCATTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: LVGSITSKSCPQLFWNTSVDTLM*FLHFHL
Trigger: CAGATGGAAATGCAGAAATCACATTAGAGTATCAAC...ACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp CTTCAAGTTCTGAACTTGCTAAACGGTAACTTGTTGGAAGCATTACTAGCAAATAAGTTCACTTTTGTTTaGAGGACTCTATGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LQVLNLLNGNLLEALLANKFTFV*RTLCSH
Trigger: ATGGGAACATAGAGTCCTCCAAACAAAAGTGAACTT...ATTTGCTAGTAATGCTTCCAACAAGTTACCGTTTAGCAAGTTCAGAACTTGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CCA 90 bp GGTAACCATGAACCTCTAAAATTCTACAAGCAAGACTGCGTACTTTTGACAGATCGTACTTTTGACAGATaGCTTTCAAAACATTCTTTC +
Preference number: 4 (lower is better)
Translates to: GNHEPLKFYKQDCVLLTDRTFDR*LSKHSF
Trigger: GAAAGAATGTTTTGAAAGCCATCTGTCAAAAGTACG...ATCTGTCAAAAGTACGCAGTCTTGCTTGTAGAATTTTAGAGGTTCATGGTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CCA 90 bp TTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTCTGTCCACAATTGTTCTaGAATACAAGTCAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: LLEALLANLVHNCSGIQVCPQLF*NTSQLE
Trigger: TTCAAGCTGACTTGTATTCCAGAACAATTGTGGACA...GACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CCA 90 bp TCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTATGTTTTTGTCCACAATTGTTCTaGAATACAAGTCAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: SFASIRFWSRISQMVLCFCPQLF*NTSQLE
Trigger: TTCAAGCTGACTTGTATTCCAGAACAATTGTGGACA...AAAACATAAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
3UTR CAA 72 bp ATTCTTCAAGTTCTGAACTTGCTAAACGGTAACTTGTaGGAAGCATTACTAGCAAATCTTGTCCACAATTGT +
Preference number: 4 (lower is better)
Translates to: ILQVLNLLNGNL*EALLANLVHNC
Trigger: ACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAAGTTACCGTTTAGCAAGTTCAGAACTTGAAGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS CCA 90 bp CGCTTCCAGAAACGGGGCCTCGGCAGACGCCACGCGCGGCCGCGGTaGGCGCGCCTCTGTCCAGCAGGGCTTGGCCCGGCGCCGCCCGGG +
Preference number: 5 (lower is better)
Translates to: RFQKRGLGRRHARPR*ARLCPAGLGPAPPG
Trigger: CCCGGGCGGCGCCGGGCCAAGCCCTGCTGGACAGAGGCGCGCCCACCGCGGCCGCGCGTGGCGTCTGCCGAGGCCCCGTTTCTGGAAGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567382.1
CDS-3UTR CAA 90 bp TCCCGGGGTTCCAGCCCCATTTCTGCCTCTGGACAGCTGTGCGGCCTTCAGCAATCTGTCCAGCAGGGCTaGGCCCGGCGCCGCCCGGGA +
Preference number: 5 (lower is better)
Translates to: SRGSSPISASGQLCGLQQSVQQG*ARRRPG
Trigger: TCCCGGGCGGCGCCGGGCCAAGCCCTGCTGGACAGA...TTGCTGAAGGCCGCACAGCTGTCCAGAGGCAGAAATGGGGCTGGAACCCCGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567382.1
CDS-3UTR CAA 90 bp GGAGGGCGTTCGCGACAGATGAATGGGGCTACTGGAAGGGGTCGGGCTTGGGGGCTCAGGGTCTTTAGGTaGTTTCTGCCGGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: GGRSRQMNGATGRGRAWGLRVFR*FLPGWG
Trigger: GCCCCAGCCCGGCAGAAACAACCTAAAGACCCTGAG...CCCCCAAGCCCGACCCCTTCCAGTAGCCCCATTCATCTGTCGCGAACGCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000567382.1
CDS-3UTR CAA 90 bp GACTCCCAGCATGGGAGCATCGCCCACACTCCCATTTCTCTACGCAGTGTTTTTAACCTACACTTCCGTTaGTCCGCTCAGTCGCCCCGG +
Preference number: 5 (lower is better)
Translates to: DSQHGSIAHTPISLRSVFNLHFR*SAQSPR
Trigger: CCGGGGCGACTGAGCGGACAAACGGAAGTGTAGGTT...AAAAACACTGCGTAGAGAAATGGGAGTGTGGGCGATGCTCCCATGCTGGGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp CTAGGTAGGGCCTGGGGATCTACATTTCCAGCACGTTCCCAGGGGATTCTGATGTCAACCTCAGCACTGTaGACACTTGGGGCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: LGRAWGSTFPARSQGILMSTSAL*TLGAVP
Trigger: TGGCACAGCCCCAAGTGTCAACAGTGCTGAGGTTGA...CATCAGAATCCCCTGGGAACGTGCTGGAAATGTAGATCCCCAGGCCCTACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp AGGTCTGTAGCAAACACTGTAGGTTGTCCACCCGATAGCCATTCTGATTTCCTTACCCTCGCCCCAAGGTaGATGCCCGAAGGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: RSVANTVGCPPDSHSDFLTLAPR*MPEGPG
Trigger: GCCAGGGCCTTCGGGCATCAACCTTGGGGCGAGGGT...AAGGAAATCAGAATGGCTATCGGGTGGACAACCTACAGTGTTTGCTACAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp CAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGAGAGTTTCTATGGGGGACGTGTCAGCTGGGTaGACACGGGCGTGGCGGAAT +
Preference number: 5 (lower is better)
Translates to: QCLGSVIPEFLCQRVSMGDVSAG*TRAWRN
Trigger: ATTCCGCCACGCCCGTGTCAACCCAGCTGACACGTC...CCCCATAGAAACTCTCTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp CCAGACAAGGATTCTGATAGGAAACCGAGCCCTGGGGATGAGGGCTCACAGACCCTCTCCTGCTTTGCCTaGGGCTACTTGTACTTAATC +
Preference number: 5 (lower is better)
Translates to: PDKDSDRKPSPGDEGSQTLSCFA*GYLYLI
Trigger: GATTAAGTACAAGTAGCCCAAGGCAAAGCAGGAGAG...GGTCTGTGAGCCCTCATCCCCAGGGCTCGGTTTCCTATCAGAATCCTTGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp AATGTCTGGCAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGACCCAGTTTTGGGCCTTaGAACTGCTCCCCAGGTGAT +
Preference number: 5 (lower is better)
Translates to: NVWQSGWQGTMSGVSDSRPSFGP*NCSPGD
Trigger: ATCACCTGGGGAGCAGTTCAAAGGCCCAAAACTGGG...TCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTGCCAGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp CACTGCGCCCGGCCGGGTCTTGCTCTTAGTTTTACTGAGGTGCAGAATTTACTCAAATCGTTCCATTACTaGAGGAGGTCGACTCCTGCC +
Preference number: 5 (lower is better)
Translates to: HCARPGLALSFTEVQNLLKSFHY*RRSTPA
Trigger: GGCAGGAGTCGACCTCCTCAAGTAATGGAACGATTT...GAGTAAATTCTGCACCTCAGTAAAACTAAGAGCAAGACCCGGCCGGGCGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp AAGGCAGAAGAGGTCACACTAGGTCCTAGAGCGTGGACGTTCTGGGTAATTAAGGCACCTGAGCCTGGCTaGCAGGAGAGATACCTATCA +
Preference number: 5 (lower is better)
Translates to: KAEEVTLGPRAWTFWVIKAPEPG*QERYLS
Trigger: TGATAGGTATCTCTCCTGCAAGCCAGGCTCAGGTGC...CTTAATTACCCAGAACGTCCACGCTCTAGGACCTAGTGTGACCTCTTCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp GGCAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGCAGGGCAGCCTGCCTTaGAAATCGTTCCATTACTTG +
Preference number: 5 (lower is better)
Translates to: GRVDGREQCLGSVIPEFLQGSLP*KSFHYL
Trigger: CAAGTAATGGAACGATTTCAAAGGCAGGCTGCCCTG...CAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp GTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGTCATGGCAGATATTTTaGGTCAGGGCAGCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: VDGREQCLGSVIPEFLCQSWQIF*VRAACL
Trigger: AAGGCAGGCTGCCCTGACCAAAAATATCTGCCATGA...CTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp TGTTCTCTTATGTCTCCACCTCTGAGGGTCCGGAAACTATCAGCAGAACCGTTAACCCCCTCTCCTGCTTaGCCTTGGGCTACTTGTACT +
Preference number: 5 (lower is better)
Translates to: CSLMSPPLRVRKLSAEPLTPSPA*PWATCT
Trigger: AGTACAAGTAGCCCAAGGCAAAGCAGGAGAGGGGGT...TAACGGTTCTGCTGATAGTTTCCGGACCCTCAGAGGTGGAGACATAAGAGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp CAGGTTCTAATTGAGGCGCACCTGAGCCTGGCTTGCAGGAGAGATACCTATCAACTGGTTTCTACACTCTaGATGCCAGTAACACCCCCA +
Preference number: 5 (lower is better)
Translates to: QVLIEAHLSLACRRDTYQLVSTL*MPVTPP
Trigger: TGGGGGTGTTACTGGCATCAAGAGTGTAGAAACCAG...TTGATAGGTATCTCTCCTGCAAGCCAGGCTCAGGTGCGCCTCAATTAGAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp GTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGAGTAGACAGGCCTTCTaGAATGCAGTTCTCGACCTC +
Preference number: 5 (lower is better)
Translates to: VDGREQCLGSVIPEFLCQSRQAF*NAVLDL
Trigger: GAGGTCGAGAACTGCATTCAAGAAGGCCTGTCTACT...CTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp CCAGACAAGGATTCTGATAGGAAACCGAGCCCTGGGGATGAGGGCTCACAGACCGTGATTCCAGAGTTTTaGTGCCAGAGAGTTTCTATG +
Preference number: 5 (lower is better)
Translates to: PDKDSDRKPSPGDEGSQTVIPEF*CQRVSM
Trigger: CATAGAAACTCTCTGGCACAAAAACTCTGGAATCAC...GGTCTGTGAGCCCTCATCCCCAGGGCTCGGTTTCCTATCAGAATCCTTGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CAA 90 bp TGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGAGAGTCCACAGAGGCTGATGTaGTACAGCTTTCAGGATCAC +
Preference number: 5 (lower is better)
Translates to: WQGTMSGVSDSRVFVPESPQRLM*YSFQDH
Trigger: GTGATCCTGAAAGCTGTACAACATCAGCCTCTGTGG...ACTCTCTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp CCAGACAAGGATTCTGATAGGAAACCGAGCCCTGGGGATGAGGGCTCACAGACCCTTCAAGTTCTGAACTaGCTAAACGGTAACTTGTTG +
Preference number: 5 (lower is better)
Translates to: PDKDSDRKPSPGDEGSQTLQVLN*LNGNLL
Trigger: CAACAAGTTACCGTTTAGCAAGTTCAGAACTTGAAG...GGTCTGTGAGCCCTCATCCCCAGGGCTCGGTTTCCTATCAGAATCCTTGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp CACTGCGCCCGGCCGGGTCTTGCTCTTAGTTTTACTGAGGTGCAGAATTTACTCGCTCTGGGCAAATGTTaGAGGAATGTCATTTGTTTC +
Preference number: 5 (lower is better)
Translates to: HCARPGLALSFTEVQNLLALGKC*RNVICF
Trigger: GAAACAAATGACATTCCTCAAACATTTGCCCAGAGC...GAGTAAATTCTGCACCTCAGTAAAACTAAGAGCAAGACCCGGCCGGGCGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp GGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAAGACCTTATTTTTGGGCAGTGACTaGCATCTCCCCTCCCTCATT +
Preference number: 5 (lower is better)
Translates to: GLRRVQKRTSRWFPRKTLFLGSD*HLPSLI
Trigger: AATGAGGGAGGGGAGATGCAAGTCACTGCCCAAAAA...TAAGGTCTTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp GGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAAGACCTTATCATATTCCCCGTGGTaGTGCTCTGGGCAAATGTTT +
Preference number: 5 (lower is better)
Translates to: GLRRVQKRTSRWFPRKTLSYSPW*CSGQMF
Trigger: AAACATTTGCCCAGAGCACAACCACGGGGAATATGA...TAAGGTCTTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp CAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGAGAGTTTCTATGGGGCCTCTGGTTTTGTTTTaGGGCAGTGACTTGCATCTC +
Preference number: 5 (lower is better)
Translates to: QCLGSVIPEFLCQRVSMGPLVLF*GSDLHL
Trigger: GAGATGCAAGTCACTGCCCAAAAACAAAACCAGAGG...CCCCATAGAAACTCTCTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp CAGGTTCTAATTGAGGCGCACCTGAGCCTGGCTTGCAGGAGAGATACCTATCAAACAATTCCTCTGGTTTaGTTTTTGGGCAGTGACTTG +
Preference number: 5 (lower is better)
Translates to: QVLIEAHLSLACRRDTYQTIPLV*FLGSDL
Trigger: CAAGTCACTGCCCAAAAACAAAACCAGAGGAATTGT...TTGATAGGTATCTCTCCTGCAAGCCAGGCTCAGGTGCGCCTCAATTAGAACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp AATGTCTGGCAGAGTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGACTCCCTTGGGACTTCTaGCCATGTGAAATAATACAT +
Preference number: 5 (lower is better)
Translates to: NVWQSGWQGTMSGVSDSRLPWDF*PCEIIH
Trigger: ATGTATTATTTCACATGGCAAGAAGTCCCAAGGGAG...TCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCACTCTGCCAGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp TTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTCAACCTACACTTCCGTTaGTCCGCTCAGTCGCCCCGG +
Preference number: 5 (lower is better)
Translates to: LLEALLANLVHNCSGIQVNLHFR*SAQSPR
Trigger: CCGGGGCGACTGAGCGGACAAACGGAAGTGTAGGTT...GACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CAA 90 bp GGTAACCATGAACCTCTAAAATTCTACAAGCAAGACTGCGTACTTTTGACAGATTGCCACTTCCGAGGCTaGAGAACATCACCAGGGACG +
Preference number: 5 (lower is better)
Translates to: GNHEPLKFYKQDCVLLTDCHFRG*RTSPGT
Trigger: CGTCCCTGGTGATGTTCTCAAGCCTCGGAAGTGGCA...ATCTGTCAAAAGTACGCAGTCTTGCTTGTAGAATTTTAGAGGTTCATGGTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp GCTGAAGGGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAACCATACTCATCTGTATaGTTCAGCCCTCAAGAGAAT +
Preference number: 5 (lower is better)
Translates to: AEGVTKSPEENITVVPKKPYSSV*FSPQEN
Trigger: ATTCTCTTGAGGGCTGAACAATACAGATGAGTATGG...TTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCCCTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp GGTGAATTACATCATCGGACGGTTCGCAGTAGACAGGCCTTCTTGAATGCAGTTGGAATCCCATGGAACTaGGTGAATTACATCATCGGA +
Preference number: 5 (lower is better)
Translates to: GELHHRTVRSRQAFLNAVGIPWN*VNYIIG
Trigger: TCCGATGATGTAATTCACCAAGTTCCATGGGATTCC...AACTGCATTCAAGAAGGCCTGTCTACTGCGAACCGTCCGATGATGTAATTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp TTCCAGACAAGGATTCTGATAGGAAACCGAGCCCTGGGGATGAGGGCTCACAGATTGGGTCACAGATTATaGTTAAGACTTGTCCAAGTT +
Preference number: 5 (lower is better)
Translates to: FQTRILIGNRALGMRAHRLGHRL*LRLVQV
Trigger: AACTTGGACAAGTCTTAACAATAATCTGTGACCCAA...TCTGTGAGCCCTCATCCCCAGGGCTCGGTTTCCTATCAGAATCCTTGTCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CAA 90 bp GTGGATGGCAGGGAACAATGTCTGGGGTCAGTGATTCCAGAGTTTTTGTGCCAGATGGGGAAGACAAAGTaGGGTCACAGATTATTGTTA +
Preference number: 5 (lower is better)
Translates to: VDGREQCLGSVIPEFLCQMGKTK*GHRLLL
Trigger: TAACAATAATCTGTGACCCAACTTTGTCTTCCCCAT...CTGGCACAAAAACTCTGGAATCACTGACCCCAGACATTGTTCCCTGCCATCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CAA 90 bp CTTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTGTAACGCTGTTTTCCTaGGTGCGAGGGCCCCCATAC +
Preference number: 5 (lower is better)
Translates to: LVGSITSKSCPQLFWNTSVTLFS*VRGPPY
Trigger: GTATGGGGGCCCTCGCACCAAGGAAAACAGCGTTAC...ACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp ATTCCCCGTGGTTGTGCTCTGGGCAAATGTTTGAGGAATGTCATTTGTTTCTGTGAACACAGTGTCTGCTaGGGAAGGCTTCCATTTACA +
Preference number: 5 (lower is better)
Translates to: IPRGCALGKCLRNVICFCEHSVC*GRLPFT
Trigger: TGTAAATGGAAGCCTTCCCAAGCAGACACTGTGTTC...ACAGAAACAAATGACATTCCTCAAACATTTGCCCAGAGCACAACCACGGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp GGTAACCATGAACCTCTAAAATTCTACAAGCAAGACTGCGTACTTTTGACAGATCTGAGACAGGACTGCTaGAGCCTAGGAGTTCTAGAC +
Preference number: 5 (lower is better)
Translates to: GNHEPLKFYKQDCVLLTDLRQDC*SLGVLD
Trigger: GTCTAGAACTCCTAGGCTCAAGCAGTCCTGTCTCAG...ATCTGTCAAAAGTACGCAGTCTTGCTTGTAGAATTTTAGAGGTTCATGGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp TCTGTTTTTCATCATGGGGAAGACAAAGTTGGGTCACAGATTATTGTTAAGACTGCACCTGAGCCTGGCTaGCAGGAGAGATACCTATCA +
Preference number: 5 (lower is better)
Translates to: SVFHHGEDKVGSQIIVKTAPEPG*QERYLS
Trigger: TGATAGGTATCTCTCCTGCAAGCCAGGCTCAGGTGC...AGTCTTAACAATAATCTGTGACCCAACTTTGTCTTCCCCATGATGAAAAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CAA 90 bp GCTGAAGGGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAACTAAACGGTAACTTGTaGGAAGCATTACTAGCAAAT +
Preference number: 5 (lower is better)
Translates to: AEGVTKSPEENITVVPKKLNGNL*EALLAN
Trigger: ATTTGCTAGTAATGCTTCCAACAAGTTACCGTTTAG...TTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCCCTTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp GGGTTACGAAGAGTCCAGAAGAGAACATCACGGTGGTTCCCAAGAAAGACCTTATTGCTAAACGGTAACTaGTTGGAAGCATTACTAGCA +
Preference number: 5 (lower is better)
Translates to: GLRRVQKRTSRWFPRKTLLLNGN*LEALLA
Trigger: TGCTAGTAATGCTTCCAACAAGTTACCGTTTAGCAA...TAAGGTCTTTCTTGGGAACCACCGTGATGTTCTCTTCTGGACTCTTCGTAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp TATTGTTCTCTTATGTCTCCACCTCTGAGGGTCCGGAAACTATCAGCAGAACCGCTCTACGCAGTGTTTTaGTGTATGGGAAATAAGACA +
Preference number: 5 (lower is better)
Translates to: YCSLMSPPLRVRKLSAEPLYAVF*CMGNKT
Trigger: TGTCTTATTTCCCATACACAAAAACACTGCGTAGAG...CGGTTCTGCTGATAGTTTCCGGACCCTCAGAGGTGGAGACATAAGAGAACAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp AGGTCTGTAGCAAACACTGTAGGTTGTCCACCCGATAGCCATTCTGATTTCCTTAACACTTACTGGGTTTaGACAGCAACTTGTAAAGAC +
Preference number: 5 (lower is better)
Translates to: RSVANTVGCPPDSHSDFLNTYWV*TATCKD
Trigger: GTCTTTACAAGTTGCTGTCAAAACCCAGTAAGTGTT...AAGGAAATCAGAATGGCTATCGGGTGGACAACCTACAGTGTTTGCTACAGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp GGTCCAGTCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTGTGATTCCAGAGTTTTaGTGCCAGAGAGTTTCTATG +
Preference number: 5 (lower is better)
Translates to: GPVLCLNKILEQNQSNGLVIPEF*CQRVSM
Trigger: CATAGAAACTCTCTGGCACAAAAACTCTGGAATCAC...AAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGACTGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CAA 90 bp TATTGTTCTCTTATGTCTCCACCTCTGAGGGTCCGGAAACTATCAGCAGAACCGAAATCTTGTCCACAATaGTTCTGGAATACAAGTCAG +
Preference number: 5 (lower is better)
Translates to: YCSLMSPPLRVRKLSAEPKSCPQ*FWNTSQ
Trigger: CTGACTTGTATTCCAGAACAATTGTGGACAAGATTT...CGGTTCTGCTGATAGTTTCCGGACCCTCAGAGGTGGAGACATAAGAGAACAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp ATTCCCCGTGGTTGTGCTCTGGGCAAATGTTTGAGGAATGTCATTTGTTTCTGTCAGCTGGAAAACTTTTaGATAATGTCAACAGCTTTC +
Preference number: 5 (lower is better)
Translates to: IPRGCALGKCLRNVICFCQLENF*IMSTAF
Trigger: GAAAGCTGTTGACATTATCAAAAAGTTTTCCAGCTG...ACAGAAACAAATGACATTCCTCAAACATTTGCCCAGAGCACAACCACGGGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp GGTCCAGTCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTTTGGGTCACAGATTATaGTTAAGACTTGTCCAAGTT +
Preference number: 5 (lower is better)
Translates to: GPVLCLNKILEQNQSNGLLGHRL*LRLVQV
Trigger: AACTTGGACAAGTCTTAACAATAATCTGTGACCCAA...AAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGACTGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CAA 90 bp ATTCCCCGTGGTTGTGCTCTGGGCAAATGTTTGAGGAATGTCATTTGTTTCTGTCTTTCCATGTATGTTTaGTTGAAATCCGAGGCAAAA +
Preference number: 5 (lower is better)
Translates to: IPRGCALGKCLRNVICFCLSMYV*LKSEAK
Trigger: TTTTGCCTCGGATTTCAACAAAACATACATGGAAAG...ACAGAAACAAATGACATTCCTCAAACATTTGCCCAGAGCACAACCACGGGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp GTCCAGTCCTTTGCCTCAATAAGATTCTGGAGCAGAATCAGTCAAATGGTCTTAAAATCTTGTCCACAATaGTTCTGGAATACAAGTCAG +
Preference number: 5 (lower is better)
Translates to: VQSFASIRFWSRISQMVLKSCPQ*FWNTSQ
Trigger: CTGACTTGTATTCCAGAACAATTGTGGACAAGATTT...TAAGACCATTTGACTGATTCTGCTCCAGAATCTTATTGAGGCAAAGGACTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CAA 90 bp CTTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTCAAGACTGCGTACTTTaGACAGATGGCTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: LVGSITSKSCPQLFWNTSQDCVL*TDGFQN
Trigger: GTTTTGAAAGCCATCTGTCAAAAGTACGCAGTCTTG...ACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS-3UTR CAA 90 bp TTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTCCAATACTGTTCTCTTTaGGAAGGTGGACATTTTGCA +
Preference number: 5 (lower is better)
Translates to: LLEALLANLVHNCSGIQVQYCSL*EGGHFA
Trigger: TGCAAAATGTCCACCTTCCAAAAGAGAACAGTATTG...GACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433866.7
CDS-3UTR CAA 90 bp CTTGTTGGAAGCATTACTAGCAAATCTTGTCCACAATTGTTCTGGAATACAAGTATGGGGAAGACAAAGTaGGGTCACAGATTATTGTTA +
Preference number: 5 (lower is better)
Translates to: LVGSITSKSCPQLFWNTSMGKTK*GHRLLL
Trigger: TAACAATAATCTGTGACCCAACTTTGTCTTCCCCAT...ACTTGTATTCCAGAACAATTGTGGACAAGATTTGCTAGTAATGCTTCCAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433866.7
ENST00000570259.1
CDS CCA 72 bp AAACGGGGCCTCGGCAGACGCCACGCGCGGCCGCGGTaGGCGCGCCTCTGTCCAGCAGGGCTTGGCCCGGCG +
Preference number: 6 (lower is better)
Translates to: KRGLGRRHARPR*ARLCPAGLGPA
Trigger: CGCCGGGCCAAGCCCTGCTGGACAGAGGCGCGCCCACCGCGGCCGCGCGTGGCGTCTGCCGAGGCCCCGTTT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567382.1
CDS CAA 90 bp TATCATCAAGTGCTGAAGTTAAAGACAACGCGTGCCAACATCTCATaGAGCCTTTTTCCTCCCGTCCCTGCAGACTACAGCCTTAAACAC +
Preference number: 6 (lower is better)
Translates to: YHQVLKLKTTRANIS*SLFPPVPADYSLKH
Trigger: GTGTTTAAGGCTGTAGTCTGCAGGGACGGGAGGAAAAAGGCTCAATGAGATGTTGGCACGCGTTGTCTTTAACTTCAGCACTTGATGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569301.1