RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HS6ST3 (Homo sapiens)

Ensembl gene IDs: ENSG00000185352

Ensembl transcript IDs: ENST00000376705.4, ENST00000620595.1

Found 612 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCTCTCAGCTCATTGATGGCTCAGTGATGTGGAGGGGGCTGGACTaGCCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCTG +
Preference number: 1 (lower is better)
Translates to: ISQLIDGSVMWRGLD*PKAVWLWVTVSVVL
Trigger: CAGCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACATCACTGAGCCATCAATGAGCTGAGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 90 bp CCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACTTCCCTaGGCATCACTCAGCATGGAAGTGGGCAGTCCATTTTTGGAGAAT +
Preference number: 1 (lower is better)
Translates to: PWILRPRRLLRASLP*ASLSMEVGSPFLEN
Trigger: ATTCTCCAAAAATGGACTGCCCACTTCCATGCTGAGTGATGCTCAGGGAAGTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR GCA 90 bp TTTAATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTaGGGGCATCACTTCCCTGAGCATCACTCAGCATGGAAGTGGGCA +
Preference number: 1 (lower is better)
Translates to: FNAPDFHGSLGPDAF*GHHFPEHHSAWKWA
Trigger: TGCCCACTTCCATGCTGAGTGATGCTCAGGGAAGTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 90 bp CCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCTGTCATaGTCGGGCTACCCACATGGGTTAGAGACAAATGCTTCTGGGAAA +
Preference number: 1 (lower is better)
Translates to: PKAVWLWVTVSVVLS*SGYPHGLETNASGK
Trigger: TTTCCCAGAAGCATTTGTCTCTAACCCATGTGGGTAGCCCGACCATGACAGCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 90 bp GGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTaGAAGCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTG +
Preference number: 1 (lower is better)
Translates to: GLKWSRIHHAFSRRQ*KPLIPIPRCLRNSV
Trigger: CACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGCTTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 90 bp CAGGTGAATGTGGTGAGAAGAGAGCAGGCATTGGCTTATGTCCAGTaGAGATGGCGGAAGGGGAGAAGAAGGAAGGCCGAAAGTGCCTTG +
Preference number: 1 (lower is better)
Translates to: QVNVVRREQALAYVQ*RWRKGRRRKAESAL
Trigger: CAAGGCACTTTCGGCCTTCCTTCTTCTCCCCTTCCGCCATCTCCACTGGACATAAGCCAATGCCTGCTCTCTTCTCACCACATTCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 90 bp CCAGCCAGCCCTAATACCCAGCCTGAAGACATGCAGTTGCTCTGGTaGCCAATGGGGTCACAGCAACTATGGGAAAGGAAAACCTTGGAG +
Preference number: 1 (lower is better)
Translates to: PASPNTQPEDMQLLW*PMGSQQLWERKTLE
Trigger: CTCCAAGGTTTTCCTTTCCCATAGTTGCTGTGACCCCATTGGTCACCAGAGCAACTGCATGTCTTCAGGCTGGGTATTAGGGCTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 90 bp TGGGGCCAACATAAAGAGCTGGCTCCCTCTGAACATCCTGATACCTaGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCA +
Preference number: 1 (lower is better)
Translates to: WGQHKELAPSEHPDT*SQVEPHTSCLQQKA
Trigger: TGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTATCAGGATGTTCAGAGGGAGCCAGCTCTTTATGTTGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR GCA 90 bp CATCAGACCCAGCCAGCCCTAATACCCAGCCTGAAGACATGCAGTTaGTCTGGTGACCAATGGGGTCACAGCAACTATGGGAAAGGAAAA +
Preference number: 1 (lower is better)
Translates to: HQTQPALIPSLKTCS*SGDQWGHSNYGKGK
Trigger: TTTTCCTTTCCCATAGTTGCTGTGACCCCATTGGTCACCAGAGCAACTGCATGTCTTCAGGCTGGGTATTAGGGCTGGCTGGGTCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR GCA 90 bp GAGAAGAAGGAAGGCCGAAAGTGCCTTGGAGAAAGAACCCTCGCATaGTCCTCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCC +
Preference number: 1 (lower is better)
Translates to: EKKEGRKCLGERTLA*SSDGTKWVESSDPA
Trigger: GGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGAGGAGCATGCGAGGGTTCTTTCTCCAAGGCACTTTCGGCCTTCCTTCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 90 bp ATAAAGAGCTGGCTCCCTCTGAACATCCTGATACCTGGTCTCAAGTaGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAGCCT +
Preference number: 1 (lower is better)
Translates to: IKSWLPLNILIPGLK*SRIHHAFSRRQWKP
Trigger: AGGCTTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTATCAGGATGTTCAGAGGGAGCCAGCTCTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 90 bp CCAGACGCCTTCTGCGGGCATCACTTCCCTGAGCATCACTCAGCATaGAAGTGGGCAGTCCATTTTTGGAGAATAAACTGTATCCCTACC +
Preference number: 1 (lower is better)
Translates to: PDAFCGHHFPEHHSA*KWAVHFWRINCIPT
Trigger: GGTAGGGATACAGTTTATTCTCCAAAAATGGACTGCCCACTTCCATGCTGAGTGATGCTCAGGGAAGTGATGCCCGCAGAAGGCGTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 90 bp AAGCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTaGGCAGGGGCTGCCTCCAAGTCTCAGTTATGCATGAATTCCTTG +
Preference number: 1 (lower is better)
Translates to: KPLIPIPRCLRNSVK*AGAASKSQLCMNSL
Trigger: CAAGGAATTCATGCATAACTGAGACTTGGAGGCAGCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR GCA 90 bp CGTGGTGCTGTCATGGTCGGGCTACCCACATGGGTTAGAGACAAATaGTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAA +
Preference number: 1 (lower is better)
Translates to: RGAVMVGLPTWVRDK*FWEIAAGFLHYWQE
Trigger: TTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGTCTCTAACCCATGTGGGTAGCCCGACCATGACAGCACCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR GCA 90 bp TCTGAACATCCTGATACCTGGTCTCAAGTGGAGCCGCATACATCATaGCTTCAGCAGAAGGCAGTGGAAGCCTTTGATACCAATCCCGAG +
Preference number: 1 (lower is better)
Translates to: SEHPDTWSQVEPHTS*LQQKAVEAFDTNPE
Trigger: CTCGGGATTGGTATCAAAGGCTTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTATCAGGATGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 90 bp GGGAGGAAGCCCATGTCGGTCTTTTTAATTTGCTTAGTACTGGCCTaGGGCCAACATAAAGAGCTGGCTCCCTCTGAACATCCTGATACC +
Preference number: 1 (lower is better)
Translates to: GRKPMSVFLICLVLA*GQHKELAPSEHPDT
Trigger: GGTATCAGGATGTTCAGAGGGAGCCAGCTCTTTATGTTGGCCCCAGGCCAGTACTAAGCAAATTAAAAAGACCGACATGGGCTTCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 90 bp GCCTTCTGCGGGCATCACTTCCCTGAGCATCACTCAGCATGGAAGTaGGCAGTCCATTTTTGGAGAATAAACTGTATCCCTACCTCTCCA +
Preference number: 1 (lower is better)
Translates to: AFCGHHFPEHHSAWK*AVHFWRINCIPTSP
Trigger: TGGAGAGGTAGGGATACAGTTTATTCTCCAAAAATGGACTGCCCACTTCCATGCTGAGTGATGCTCAGGGAAGTGATGCCCGCAGAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 90 bp TTGGATGGAGTAGACAACCTGCTAGAAGTGTTTGAATGCCTCCTCTaGGTTTTGGTCTCCCCTGCAGCACCGCCCATCTCTTGGATATTT +
Preference number: 1 (lower is better)
Translates to: LDGVDNLLEVFECLL*VLVSPAAPPISWIF
Trigger: AAATATCCAAGAGATGGGCGGTGCTGCAGGGGAGACCAAAACTCAGAGGAGGCATTCAAACACTTCTAGCAGGTTGTCTACTCCATCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 90 bp GCAGAACATGTAGCTCACACAGGTTCCACTGAGTGTGCCAAAGGATaGCAGTTGCAATCCTTTCCACAGACATCTTGGAACACAGGCTCA +
Preference number: 1 (lower is better)
Translates to: AEHVAHTGSTECAKG*QLQSFPQTSWNTGS
Trigger: TGAGCCTGTGTTCCAAGATGTCTGTGGAAAGGATTGCAACTGTCATCCTTTGGCACACTCAGTGGAACCTGTGTGAGCTACATGTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 90 bp GCTGTCATGGTCGGGCTACCCACATGGGTTAGAGACAAATGCTTCTaGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTTA +
Preference number: 1 (lower is better)
Translates to: AVMVGLPTWVRDKCF*EIAAGFLHYWQEAL
Trigger: TAAAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGTCTCTAACCCATGTGGGTAGCCCGACCATGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 90 bp TCTGGTGACCAATGGGGTCACAGCAACTATGGGAAAGGAAAACCTTaGAGTCACAGCTGCGATCAGATCAGGGTATTCTTGTGTAAGTCC +
Preference number: 1 (lower is better)
Translates to: SGDQWGHSNYGKGKP*SHSCDQIRVFLCKS
Trigger: GGACTTACACAAGAATACCCTGATCTGATCGCAGCTGTGACTCCAAGGTTTTCCTTTCCCATAGTTGCTGTGACCCCATTGGTCACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 90 bp TTTGTGTTGCAGATGTTGCTGGTGTTTATAGCTAGGCCAGTCCTCTaGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCTTTCACATG +
Preference number: 1 (lower is better)
Translates to: FVLQMLLVFIARPVL*KFLHLCQAGWFFHM
Trigger: CATGTGAAAGAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTATAAACACCAGCAACATCTGCAACACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR GCA 90 bp TTTTCATGTGTGCCTCTGTGGGTTCCTGGTACCCAAACTATTCTATaGTCCTGCAAAGGAGATCACAGGAACTGTCTCCTTTTTCGGTGT +
Preference number: 1 (lower is better)
Translates to: FSCVPLWVPGTQTIL*SCKGDHRNCLLFRC
Trigger: ACACCGAAAAAGGAGACAGTTCCTGTGATCTCCTTTGCAGGAGCATAGAATAGTTTGGGTACCAGGAACCCACAGAGGCACACATGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR GCA 90 bp CCAGTTTCAGCAGAACATCCAAGCCATAATTTGGCTTTTCATGTGTaGCTCTGTGGGTTCCTGGTACCCAAACTATTCTATGCTCCTGCA +
Preference number: 1 (lower is better)
Translates to: PVSAEHPSHNLAFHV*LCGFLVPKLFYAPA
Trigger: TGCAGGAGCATAGAATAGTTTGGGTACCAGGAACCCACAGAGGCACACATGAAAAGCCAAATTATGGCTTGGATGTTCTGCTGAAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 90 bp GGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATaGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATT +
Preference number: 1 (lower is better)
Translates to: GTVSFFGVALLGLLK*PIWDALLPYLISPI
Trigger: AATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 90 bp ATCCAAGCCATAATTTGGCTTTTCATGTGTGCCTCTGTGGGTTCCTaGTACCCAAACTATTCTATGCTCCTGCAAAGGAGATCACAGGAA +
Preference number: 1 (lower is better)
Translates to: IQAIIWLFMCASVGS*YPNYSMLLQRRSQE
Trigger: TTCCTGTGATCTCCTTTGCAGGAGCATAGAATAGTTTGGGTACCAGGAACCCACAGAGGCACACATGAAAAGCCAAATTATGGCTTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 90 bp ATCAGATCAGGGTATTCTTGTGTAAGTCCAACCCAGCTTTCTCTTTaGTCTGATCCTTCCAACTCAGCTTTCAGTCCCTACAACCATTCC +
Preference number: 1 (lower is better)
Translates to: IRSGYSCVSPTQLSL*SDPSNSAFSPYNHS
Trigger: GGAATGGTTGTAGGGACTGAAAGCTGAGTTGGAAGGATCAGATCAAAGAGAAAGCTGGGTTGGACTTACACAAGAATACCCTGATCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 90 bp ACACACAGGTTTCAGAACCTGCCCACTTGCTCAGAAGGGCTAATTTaGAGTCTCAAGGAATTAGTTCAGATTTGTCCAGGTGAATGTGGT +
Preference number: 1 (lower is better)
Translates to: THRFQNLPTCSEGLI*SLKELVQICPGECG
Trigger: ACCACATTCACCTGGACAAATCTGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTCTGAAACCTGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 90 bp AGAGACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTaGCAGGAAGCTTTAGGTAGGACGAGCCCTTATTCCATATGGATA +
Preference number: 1 (lower is better)
Translates to: RDKCFWEIAAGFLHY*QEALGRTSPYSIWI
Trigger: TATCCATATGGAATAAGGGCTCGTCCTACCTAAAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 90 bp TTTTGCCTTCAGCTCCTTGAAGGGATTGATCAGATCAATCCGTTGTaGAACTTCCCACTCACTCTGATCCTCCTAATAAATGCTAGACAA +
Preference number: 1 (lower is better)
Translates to: FCLQLLEGIDQINPL*NFPLTLILLINARQ
Trigger: TTGTCTAGCATTTATTAGGAGGATCAGAGTGAGTGGGAAGTTTCACAACGGATTGATCTGATCAATCCCTTCAAGGAGCTGAAGGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 90 bp TTTTCTCTAGAGTTACTCCTACTCTCCCTAACCCCCATCTCTAAATaGTCCCACTATACAGGACCTCAGATAGAGATCATGGTTGATAAG +
Preference number: 1 (lower is better)
Translates to: FSLELLLLSLTPISK*SHYTGPQIEIMVDK
Trigger: CTTATCAACCATGATCTCTATCTGAGGTCCTGTATAGTGGGATCATTTAGAGATGGGGGTTAGGGAGAGTAGGAGTAACTCTAGAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR GCA 90 bp ACTATTTTCATCTATGAAATGGAGACTAACAATACCCATTTGTTGTaGAGAATATATTTAAGGTATGAAAAGGGCCTCGTTCAGTTCCTG +
Preference number: 1 (lower is better)
Translates to: TIFIYEMETNNTHLL*RIYLRYEKGLVQFL
Trigger: CAGGAACTGAACGAGGCCCTTTTCATACCTTAAATATATTCTGCACAACAAATGGGTATTGTTAGTCTCCATTTCATAGATGAAAATAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACCAACCTCCCCTGTCCTaGATCCACTCCCCGTTCCCT +
Preference number: 2 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHQPPLS*IHSPFP
Trigger: AGGGAACGGGGAGTGGATCCAGGACAGGGGAGGTTG...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCGCCTCGTTCAGTTCCTaGAGCAAGGGAGCCACCCGA +
Preference number: 2 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGASFSS*SKGATR
Trigger: TCGGGTGGCTCCCTTGCTCCAGGAACTGAACGAGGC...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCCGGTGTGGCTCTCCTTaGCCTTCTAAAATGGCCTAT +
Preference number: 2 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCRCGSP*PSKMAY
Trigger: ATAGGCCATTTTAGAAGGCCAAGGAGAGCCACACCG...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAGCGTGGTGCTGTCATaGTCGGGCTACCCACATGGG +
Preference number: 2 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGSVVLS*SGYPHG
Trigger: CCCATGTGGGTAGCCCGACCATGACAGCACCACGCT...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CAA 90 bp CAGTGGAGATGGCGGAAGGGGAGAAGAAGGAAGGCCGAAAGTGCCTaGGAGAAAGAACCCTCGCATGCTCCTCAGATGGCACAAAATGGG +
Preference number: 2 (lower is better)
Translates to: QWRWRKGRRRKAESA*EKEPSHAPQMAQNG
Trigger: CCCATTTTGTGCCATCTGAGGAGCATGCGAGGGTTCTTTCTCCAAGGCACTTTCGGCCTTCCTTCTTCTCCCCTTCCGCCATCTCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR TCA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCGGAGTAAAGAGAACTTaGCCTTTGCAGTCAGCTAGA +
Preference number: 2 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCGVKRT*PLQSAR
Trigger: TCTAGCTGACTGCAAAGGTCAAGTTCTCTTTACTCC...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp AGGGAGCCACCCGATAATGCCTTCCCTTGCACCCCAGATGAAGCCAAGCACAGTAACAGAAAGTCAATGTaGCTGCTCACCCTCCCCCTC +
Preference number: 2 (lower is better)
Translates to: REPPDNAFPCTPDEAKHSNRKSM*LLTLPL
Trigger: GAGGGGGAGGGTGAGCAGGCACATTGACTTTCTGTT...ACTGTGCTTGGCTTCATCTGGGGTGCAAGGGAAGGCATTATCGGGTGGCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGGGCCCAGACGCCTTCTaGGGGCATCACTTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: SDGTKWVESSDPASPNTQGPDAF*GHHFPE
Trigger: CTCAGGGAAGTGATGCCCGCAGAAGGCGTCTGGGCC...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCCTAAAATGGCCTATATaGGATGCACTCCTACCCTAC +
Preference number: 2 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCLKWPI*DALLPY
Trigger: GTAGGGTAGGAGTGCATCCCATATAGGCCATTTTAG...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGCAGTTTGAGACACTCTaGCCTGATTTACTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLAQFETL*PDLLAV
Trigger: CACAGCCAGTAAATCAGGCCAGAGTGTCTCAAACTG...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACCTCCAGATCTCTATCTaGTGGAGCTGCTGGACTTCC +
Preference number: 2 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHLQISI*WSCWTS
Trigger: GGAAGTCCAGCAGCTCCACCAGATAGAGATCTGGAG...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCCTGGGAAATTGCAGCTaGCTTCTTGCATTATTGGCA +
Preference number: 2 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCLGNCS*LLALLA
Trigger: TGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAG...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCGGGTCACTGTTAGCGTaGTGCTGTCATGGTCGGGCT +
Preference number: 2 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFGSLLA*CCHGRA
Trigger: AGCCCGACCATGACAGCACCACGCTAACAGTGACCC...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR TCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGTGCTTGTGGGCTGACTaGCTCACAACCCCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQCLWAD*LTTPER
Trigger: TCTCTCTGGGGTTGTGAGTCAGTCAGCCCACAAGCA...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR TCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTATGGAGGGGGCTGGACTaGCCCAAGGCAGTATGGCTC +
Preference number: 2 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLWRGLD*PKAVWL
Trigger: GAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCA...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR TCA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACAGGACCCCATGGGTATaGCAAGCTTGCTGCTTTAGA +
Preference number: 2 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHRTPWV*QACCFR
Trigger: TCTAAAGCAGCAAGCTTGTCATACCCATGGGGTCCT...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCATGGCCTATATGGGATaGACTCCTACCCTACTTAAT +
Preference number: 2 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCMAYMG*TPTLLN
Trigger: ATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCAT...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACTCATGTGTGCCTCTGTaGGTTCCTGGTACCCAAACT +
Preference number: 2 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHSCVPL*VPGTQT
Trigger: AGTTTGGGTACCAGGAACCCACAGAGGCACACATGA...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCGGATTTTGTAGGATGTaGGTCTCTAGCAATGGTCAA +
Preference number: 2 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCGFCRM*VSSNGQ
Trigger: TTGACCATTGCTAGAGACCCACATCCTACAAAATCC...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCTCTGGCCTGATTTACTaGCTGTGGCCACAGTCTAAC +
Preference number: 2 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGSGLIY*LWPQSN
Trigger: GTTAGACTGTGGCCACAGCCAGTAAATCAGGCCAGA...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGGCCTCGTTCAGTTCCTaGAGCAAGGGAGCCACCCGA +
Preference number: 2 (lower is better)
Translates to: SDGTKWVESSDPASPNTQASFSS*SKGATR
Trigger: TCGGGTGGCTCCCTTGCTCCAGGAACTGAACGAGGC...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGGCCTCCTCTGAGTTTTaGTCTCCCCTGCAGCACCGC +
Preference number: 2 (lower is better)
Translates to: SDGTKWVESSDPASPNTQASSEF*SPLQHR
Trigger: GCGGTGCTGCAGGGGAGACCAAAACTCAGAGGAGGC...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR TCA 90 bp AGGGAGCCACCCGATAATGCCTTCCCTTGCACCCCAGATGAAGCCAAGCACAGTCAGATCAATCCGTTGTaGAACTTCCCACTCACTCTG +
Preference number: 2 (lower is better)
Translates to: REPPDNAFPCTPDEAKHSQINPL*NFPLTL
Trigger: CAGAGTGAGTGGGAAGTTTCACAACGGATTGATCTG...ACTGTGCTTGGCTTCATCTGGGGTGCAAGGGAAGGCATTATCGGGTGGCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAAACAGAAAGTCAATGTaGCTGCTCACCCTCCCCCTC +
Preference number: 2 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVENRKSM*LLTLPL
Trigger: GAGGGGGAGGGTGAGCAGGCACATTGACTTTCTGTT...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCGGGTTTTACACATTTTaGCTTCAGCTCCTTGAAGGG +
Preference number: 2 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGGFYTF*LQLLEG
Trigger: CCCTTCAAGGAGCTGAAGGCAAAATGTGTAAAACCC...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAACGGTGTGGCTCTCCTTaGCCTTCTAAAATGGCCTAT +
Preference number: 2 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVERCGSP*PSKMAY
Trigger: ATAGGCCATTTTAGAAGGCCAAGGAGAGCCACACCG...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGTCATGTGTGCCTCTGTaGGTTCCTGGTACCCAAACT +
Preference number: 2 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQSCVPL*VPGTQT
Trigger: AGTTTGGGTACCAGGAACCCACAGAGGCACACATGA...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR TCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGCAGATCAATCCGTTGTaGAACTTCCCACTCACTCTG +
Preference number: 2 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQQINPL*NFPLTL
Trigger: CAGAGTGAGTGGGAAGTTTCACAACGGATTGATCTG...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACATGCTTCTGGGAAATTaGAGCTGGCTTCTTGCATTA +
Preference number: 2 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHMLLGN*SWLLAL
Trigger: TAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCAT...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGGAAGTGAGCAGGGGCTaGCTCCAAGTCTCAGTTATG +
Preference number: 2 (lower is better)
Translates to: SDGTKWVESSDPASPNTQEVSRG*LQVSVM
Trigger: CATAACTGAGACTTGGAGGCAGCCCCTGCTCACTTC...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCGCCTCTGTGGGTTCCTaGTACCCAAACTATTCTATG +
Preference number: 2 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFASVGS*YPNYSM
Trigger: CATAGAATAGTTTGGGTACCAGGAACCCACAGAGGC...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCGGATTTTGTAGGATGTaGGTCTCTAGCAATGGTCAA +
Preference number: 2 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGGFCRM*VSSNGQ
Trigger: TTGACCATTGCTAGAGACCCACATCCTACAAAATCC...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGCTGATTTACTGGCTGTaGCCACAGTCTAACAACAGG +
Preference number: 2 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQLIYWL*PQSNNR
Trigger: CCTGTTGTTAGACTGTGGCCACAGCCAGTAAATCAG...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAATCTGGTGGAGCTGCTaGACTTCCCTCGGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: EPAHLLRRANLKSQGISSIWWSC*TSLGAG
Trigger: ACCTGCCCCGAGGGAAGTCCAGCAGCTCCACCAGAT...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCGCTACTTATTTTCTGTaGGCTTCACTATTTTCATCT +
Preference number: 2 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCATYFL*ASLFSS
Trigger: AGATGAAAATAGTGAAGCCCACAGAAAATAAGTAGC...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR TCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTATGCAGCACATTAGGATaGCAGAGCAACAGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLCSTLG*QSNRRG
Trigger: CCCTCTCCTGTTGCTCTGTCATCCTAATGTGCTGCA...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGCCTTGGAGTCACAGCTaGGATCAGATCAGGGTATTC +
Preference number: 2 (lower is better)
Translates to: SDGTKWVESSDPASPNTQPWSHS*DQIRVF
Trigger: GAATACCCTGATCTGATCGCAGCTGTGACTCCAAGG...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGCTGAAGACATGCAGTTaGTCTGGTGACCAATGGGGT +
Preference number: 2 (lower is better)
Translates to: SDGTKWVESSDPASPNTQLKTCS*SGDQWG
Trigger: ACCCCATTGGTCACCAGAGCAACTGCATGTCTTCAG...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGACTTGGCCTTCTAAAATaGCCTATATGGGATGCACTC +
Preference number: 2 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGLGLLK*PIWDAL
Trigger: GAGTGCATCCCATATAGGCCATTTTAGAAGGCCAAG...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGCAGCCAAGTGGGGGTTaGTGTAAGACCTCATCTAAG +
Preference number: 2 (lower is better)
Translates to: SDGTKWVESSDPASPNTQQPSGG*CKTSSK
Trigger: CTTAGATGAGGTCTTACACCAACCCCCACTTGGCTG...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAAATCTGGTGGAGCTGCTaGACTTCCCTCGGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQIWWSC*TSLGAG
Trigger: ACCTGCCCCGAGGGAAGTCCAGCAGCTCCACCAGAT...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCAGAGACAAATGCTTCTaGGAAATTGCAGCTGGCTTC +
Preference number: 2 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFRDKCF*EIAAGF
Trigger: GAAGCCAGCTGCAATTTCCCAGAAGCATTTGTCTCT...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCTTGCTAGGTCTATCCTaGGGACCTTCTTGCCAATAT +
Preference number: 2 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFLLGLS*GPSCQY
Trigger: ATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAA...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR TCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTAGATCTCTCAGCTCATTaGTGGCTCAGTGATGTGGAG +
Preference number: 2 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLDLSAH*WLSDVE
Trigger: CTCCACATCACTGAGCCATCAATGAGCTGAGAGATC...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAATGGGTTAGAGACAAATaGTTCTGGGAAATTGCAGCT +
Preference number: 2 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVEWVRDK*FWEIAA
Trigger: AGCTGCAATTTCCCAGAAGCATTTGTCTCTAACCCA...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGCAGATGTCCTCAGAATaGCTCAGCTTCTCCAAGGTA +
Preference number: 2 (lower is better)
Translates to: SDGTKWVESSDPASPNTQQMSSE*LSFSKV
Trigger: TACCTTGGAGAAGCTGAGCCATTCTGAGGACATCTG...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACCGGATAATCTCCAGCTaGATAAAAATGAAGACAAAG +
Preference number: 2 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHRIISS*IKMKTK
Trigger: CTTTGTCTTCATTTTTATCCAGCTGGAGATTATCCG...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCATGAAGTCAAAAGGCTaGGGCTCTAAGCAACTTTCT +
Preference number: 2 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFMKSKG*GSKQLS
Trigger: AGAAAGTTGCTTAGAGCCCCAGCCTTTTGACTTCAT...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR TCA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAACCTCATCTAAGGGCTaGAATGTTTTTCTCTTTCTC +
Preference number: 2 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGTSSKG*NVFLFL
Trigger: GAGAAAGAGAAAAACATTTCAGCCCTTAGATGAGGT...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR TCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGGTGATAACCATCCCATaGATGGTATTCCATGTCTCC +
Preference number: 2 (lower is better)
Translates to: SDGTKWVESSDPASPNTQVITIP*MVFHVS
Trigger: GGAGACATGGAATACCATTCATGGGATGGTTATCAC...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR TCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCCGGGCATCACTTCCCTaGGCATCACTCAGCATGGAA +
Preference number: 2 (lower is better)
Translates to: TYTQSCLILISNLGTGASRASLP*ASLSME
Trigger: TTCCATGCTGAGTGATGCTCAGGGAAGTGATGCCCG...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAGAGCCGCATACATCATaGCTTCAGCAGAAGGCAGTG +
Preference number: 2 (lower is better)
Translates to: EPAHLLRRANLKSQGISSEPHTS*LQQKAV
Trigger: CACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTC...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGTACTGGAGCTTCCATTaGCAAGAGAAGGGAAAGAAC +
Preference number: 2 (lower is better)
Translates to: SDGTKWVESSDPASPNTQYWSFH*QEKGKN
Trigger: GTTCTTTCCCTTCTCTTGGCAATGGAAGCTCCAGTA...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGACTGGAAGCAATATGTaGAACTTCCCTCCACTTCCT +
Preference number: 2 (lower is better)
Translates to: SDGTKWVESSDPASPNTQTGSNM*NFPPLP
Trigger: AGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGT...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCACCCAGCCTGAAGACATaGAGTTGCTCTGGTGACCAA +
Preference number: 2 (lower is better)
Translates to: EPAHLLRRANLKSQGISSPSLKT*SCSGDQ
Trigger: TTGGTCACCAGAGCAACTGCATGTCTTCAGGCTGGG...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCACATCTTTCTTTCTGTaGTGGCAAAATTTCAAGACT +
Preference number: 2 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGTSFFL*WQNFKT
Trigger: AGTCTTGAAATTTTGCCACCACAGAAAGAAAGATGT...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTACCAGAGAGAGTATTCTaGAGGCTGAGAAGTGGCTTA +
Preference number: 2 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLPERVF*RLRSGL
Trigger: TAAGCCACTTCTCAGCCTCCAGAATACTCTCTCTGG...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCGCTACTTATTTTCTGTaGGCTTCACTATTTTCATCT +
Preference number: 2 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGATYFL*ASLFSS
Trigger: AGATGAAAATAGTGAAGCCCACAGAAAATAAGTAGC...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CAA 90 bp CATGAGTCCTTGCCTAGAAGTTCAAGGGCTTTTGTGTTGCAGATGTaGCTGGTGTTTATAGCTAGGCCAGTCCTCTGGAAATTTCTGCAC +
Preference number: 2 (lower is better)
Translates to: HESLPRSSRAFVLQM*LVFIARPVLWKFLH
Trigger: GTGCAGAAATTTCCAGAGGACTGGCCTAGCTATAAACACCAGCAACATCTGCAACACAAAAGCCCTTGAACTTCTAGGCAAGGACTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR TCA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTATGCTTGTGGGCTGACTaGCTCACAACCCCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: YSYLLARSILGTFLPILVCLWAD*LTTPER
Trigger: TCTCTCTGGGGTTGTGAGTCAGTCAGCCCACAAGCA...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR TCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAGATCTCTCAGCTCATTaGTGGCTCAGTGATGTGGAG +
Preference number: 2 (lower is better)
Translates to: EPAHLLRRANLKSQGISSDLSAH*WLSDVE
Trigger: CTCCACATCACTGAGCCATCAATGAGCTGAGAGATC...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCCAGCCAAGTGGGGGTTaGTGTAAGACCTCATCTAAG +
Preference number: 2 (lower is better)
Translates to: ERVFWRLRSGLGKASLNIQPSGG*CKTSSK
Trigger: CTTAGATGAGGTCTTACACCAACCCCCACTTGGCTG...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAACTCCAGATCTCTATCTaGTGGAGCTGCTGGACTTCC +
Preference number: 2 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQLQISI*WSCWTS
Trigger: GGAAGTCCAGCAGCTCCACCAGATAGAGATCTGGAG...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAGTCGGGCTACCCACATaGGTTAGAGACAAATGCTTC +
Preference number: 2 (lower is better)
Translates to: EPAHLLRRANLKSQGISSVGLPT*VRDKCF
Trigger: GAAGCATTTGTCTCTAACCCATGTGGGTAGCCCGAC...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CAA 90 bp CTCCTCAAAACACTGGTTTTTCTGGCAAGATGTCAATCTGGCCCTTaGATGAGTTCCCATAATGCAGCAGAACATGTAGCTCACACAGGT +
Preference number: 2 (lower is better)
Translates to: LLKTLVFLARCQSGP*MSSHNAAEHVAHTG
Trigger: ACCTGTGTGAGCTACATGTTCTGCTGCATTATGGGAACTCATCAAAGGGCCAGATTGACATCTTGCCAGAAAAACCAGTGTTTTGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCATTGGCTTTTCATGTGTaGCTCTGTGGGTTCCTGGTA +
Preference number: 2 (lower is better)
Translates to: EPAHLLRRANLKSQGISSLAFHV*LCGFLV
Trigger: TACCAGGAACCCACAGAGGCACACATGAAAAGCCAA...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAAATACCAATCCCGAGGTaGCTAAGGAACAGCGTGAAG +
Preference number: 2 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQIPIPR*LRNSVK
Trigger: CTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTAT...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAACATCTTTCTTTCTGTaGTGGCAAAATTTCAAGACT +
Preference number: 2 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVETSFFL*WQNFKT
Trigger: AGTCTTGAAATTTTGCCACCACAGAAAGAAAGATGT...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCCAGTTTGAGACACTCTaGCCTGATTTACTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: ERVFWRLRSGLGKASLNIQFETL*PDLLAV
Trigger: CACAGCCAGTAAATCAGGCCAGAGTGTCTCAAACTG...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCGCCAACATAAAGAGCTaGCTCCCTCTGAACATCCTG +
Preference number: 2 (lower is better)
Translates to: TYTQSCLILISNLGTGASANIKS*LPLNIL
Trigger: CAGGATGTTCAGAGGGAGCCAGCTCTTTATGTTGGC...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCTGCTTAGTACTGGCCTaGGGCCAACATAAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: TYTQSCLILISNLGTGASCLVLA*GQHKEL
Trigger: CAGCTCTTTATGTTGGCCCCAGGCCAGTACTAAGCA...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCACGCATGCTCCTCAGATaGCACAAAATGGGTAGAATC +
Preference number: 2 (lower is better)
Translates to: EPAHLLRRANLKSQGISSRMLLR*HKMGRI
Trigger: GATTCTACCCATTTTGTGCCATCTGAGGAGCATGCG...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR TCA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTGTGATAACCATCCCATaGATGGTATTCCATGTCTCC +
Preference number: 2 (lower is better)
Translates to: TNASGKLQLASCIIGRKLVITIP*MVFHVS
Trigger: GGAGACATGGAATACCATTCATGGGATGGTTATCAC...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCATCGGTCTTTTTAATTTaGTTAGTACTGGCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: EPAHLLRRANLKSQGISSSVFLI*LVLAWG
Trigger: GCCCCAGGCCAGTACTAAGCAAATTAAAAAGACCGA...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTCTAAAATGGCCTATATaGGATGCACTCCTACCCTAC +
Preference number: 2 (lower is better)
Translates to: TNASGKLQLASCIIGRKLLKWPI*DALLPY
Trigger: GTAGGGTAGGAGTGCATCCCATATAGGCCATTTTAG...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAAGCCTCTGTGGGTTCCTaGTACCCAAACTATTCTATG +
Preference number: 2 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQASVGS*YPNYSM
Trigger: CATAGAATAGTTTGGGTACCAGGAACCCACAGAGGC...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTACATGGCTTAAGGTTATaGTGTCAGGATTTTGTAGGA +
Preference number: 2 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLHGLRL*CQDFVG
Trigger: TCCTACAAAATCCTGACACCATAACCTTAAGCCATG...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCACCGTTCCCTAAAAGATaGAAGGAAAGGCATGGCTTA +
Preference number: 2 (lower is better)
Translates to: EPAHLLRRANLKSQGISSPFPKR*KERHGL
Trigger: TAAGCCATGCCTTTCCTTCCATCTTTTAGGGAACGG...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTCCGTTCCCTAAAAGATaGAAGGAAAGGCATGGCTTA +
Preference number: 2 (lower is better)
Translates to: TNASGKLQLASCIIGRKLPFPKR*KERHGL
Trigger: TAAGCCATGCCTTTCCTTCCATCTTTTAGGGAACGG...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR TCA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAAGGAGTAAAGAGAACTTaGCCTTTGCAGTCAGCTAGA +
Preference number: 2 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQGVKRT*PLQSAR
Trigger: TCTAGCTGACTGCAAAGGTCAAGTTCTCTTTACTCC...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAATAAGAACTCGGCAATaGAGCACATTTCTTGTCCAG +
Preference number: 2 (lower is better)
Translates to: EPAHLLRRANLKSQGISSIRTRQ*STFLVQ
Trigger: CTGGACAAGAAATGTGCTGCATTGCCGAGTTCTTAT...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTATAAGAACTCGGCAATaGAGCACATTTCTTGTCCAG +
Preference number: 2 (lower is better)
Translates to: TNASGKLQLASCIIGRKLIRTRQ*STFLVQ
Trigger: CTGGACAAGAAATGTGCTGCATTGCCGAGTTCTTAT...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAATTGCAGCTGGCTTCTTaGATTATTGGCAGGAAGCTT +
Preference number: 2 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQLQLAS*IIGRKL
Trigger: AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAA...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTATCCAAGTCTCAGTTATaGATGAATTCCTTGCCAAAA +
Preference number: 2 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLSKSQL*MNSLPK
Trigger: TTTTGGCAAGGAATTCATGCATAACTGAGACTTGGA...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCTCGGTCTTTTTAATTTaGTTAGTACTGGCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: TYTQSCLILISNLGTGASSVFLI*LVLAWG
Trigger: GCCCCAGGCCAGTACTAAGCAAATTAAAAAGACCGA...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTACGGATAATCTCCAGCTaGATAAAAATGAAGACAAAG +
Preference number: 2 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLRIISS*IKMKTK
Trigger: CTTTGTCTTCATTTTTATCCAGCTGGAGATTATCCG...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTACCAGAGAGAGTATTCTaGAGGCTGAGAAGTGGCTTA +
Preference number: 2 (lower is better)
Translates to: YSYLLARSILGTFLPILVPERVF*RLRSGL
Trigger: TAAGCCACTTCTCAGCCTCCAGAATACTCTCTCTGG...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCCTGGGAAATTGCAGCTaGCTTCTTGCATTATTGGCA +
Preference number: 2 (lower is better)
Translates to: TYTQSCLILISNLGTGASLGNCS*LLALLA
Trigger: TGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAG...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAAAGAGACAAATGCTTCTaGGAAATTGCAGCTGGCTTC +
Preference number: 2 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQRDKCF*EIAAGF
Trigger: GAAGCCAGCTGCAATTTCCCAGAAGCATTTGTCTCT...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CAA 90 bp TTAATAAAACACACACACACCACACACGTGCACATATACACAAAGTaGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCATTGC +
Preference number: 2 (lower is better)
Translates to: LIKHTHTTHVHIYTK*SHPNLQSGYWSFHC
Trigger: GCAATGGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGTGTGTTTTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR TCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAGTAATGAGGACCAAATaGGACAGCACATGCAAAAAT +
Preference number: 2 (lower is better)
Translates to: EPAHLLRRANLKSQGISSVMRTK*DSTCKN
Trigger: ATTTTTGCATGTGCTGTCTCATTTGGTCCTCATTAC...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCACTATTCTATGCTCCTaGAAAGGAGATCACAGGAAC +
Preference number: 2 (lower is better)
Translates to: TYTQSCLILISNLGTGASTILCS*KGDHRN
Trigger: GTTCCTGTGATCTCCTTTGCAGGAGCATAGAATAGT...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR GCA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAAACCCAAACTATTCTATaGTCCTGCAAAGGAGATCAC +
Preference number: 2 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQTQTIL*SCKGDH
Trigger: GTGATCTCCTTTGCAGGAGCATAGAATAGTTTGGGT...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAGTATTCCATGTCTCCTaGCCTAATTCCGAGTTTTTA +
Preference number: 2 (lower is better)
Translates to: EPAHLLRRANLKSQGISSVFHVS*PNSEFL
Trigger: TAAAAACTCGGAATTAGGCCAGGAGACATGGAATAC...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CAA 90 bp CAATTCATTAGGCTACAAAACACACAGGTTTCAGAACCTGCCCACTaGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAGAT +
Preference number: 2 (lower is better)
Translates to: QFIRLQNTQVSEPAH*LRRANLKSQGISSD
Trigger: ATCTGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTCTGAAACCTGTGTGTTTTGTAGCCTAATGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR TCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCTGCCTAAAAAGTCATTaGTCTCTCAGCTCATTGATG +
Preference number: 2 (lower is better)
Translates to: TYTQSCLILISNLGTGASCLKSH*SLSSLM
Trigger: CATCAATGAGCTGAGAGATCAATGACTTTTTAGGCA...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTAATGGAAGGAAAGGCATaGCTTAAGGTTATGGTGTCA +
Preference number: 2 (lower is better)
Translates to: YSYLLARSILGTFLPILVMEGKA*LKVMVS
Trigger: TGACACCATAACCTTAAGCCATGCCTTTCCTTCCAT...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCGTATTCCATGTCTCCTaGCCTAATTCCGAGTTTTTA +
Preference number: 2 (lower is better)
Translates to: TYTQSCLILISNLGTGASVFHVS*PNSEFL
Trigger: TAAAAACTCGGAATTAGGCCAGGAGACATGGAATAC...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAAGGAGTTGATTTGGTTTaGGATTTAATGCTCCTGACT +
Preference number: 2 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQGVDLV*DLMLLT
Trigger: AGTCAGGAGCATTAAATCCCAAACCAAATCAACTCC...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCACTTGACCAGTGTCTTTaGCATTTTCCATGTCAAAAA +
Preference number: 2 (lower is better)
Translates to: EPAHLLRRANLKSQGISSLDQCL*HFPCQK
Trigger: TTTTTGACATGGAAAATGCCAAAGACACTGGTCAAG...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CCA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTAATCCAAGCCATAATTTaGCTTTTCATGTGTGCCTCT +
Preference number: 2 (lower is better)
Translates to: YSYLLARSILGTFLPILVIQAII*LFMCAS
Trigger: AGAGGCACACATGAAAAGCCAAATTATGGCTTGGAT...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CAA 90 bp ACTCATTTAACAGCCAATGAAACCTTTAAGAATGAAAGCAGTATGTaGCTGACAAAGTACCAGGAGCCTGGGGAAGAAGACATTAAAAAG +
Preference number: 2 (lower is better)
Translates to: THLTANETFKNESSM*LTKYQEPGEEDIKK
Trigger: CTTTTTAATGTCTTCTTCCCCAGGCTCCTGGTACTTTGTCAGCAACATACTGCTTTCATTCTTAAAGGTTTCATTGGCTGTTAAATGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR GCA 72 bp CCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTaGGGGCATCACTTCCCTGAGCATCACTCAGCATGG +
Preference number: 3 (lower is better)
Translates to: PDFHGSLGPDAF*GHHFPEHHSAW
Trigger: CCATGCTGAGTGATGCTCAGGGAAGTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 72 bp CTCATTGATGGCTCAGTGATGTGGAGGGGGCTGGACTaGCCCAAGGCAGTATGGCTCTGGGTCACTGTTAGC +
Preference number: 3 (lower is better)
Translates to: LIDGSVMWRGLD*PKAVWLWVTVS
Trigger: GCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACATCACTGAGCCATCAATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 72 bp CTTAGGCCCAGACGCCTTCTGCGGGCATCACTTCCCTaGGCATCACTCAGCATGGAAGTGGGCAGTCCATTT +
Preference number: 3 (lower is better)
Translates to: LRPRRLLRASLP*ASLSMEVGSPF
Trigger: AAATGGACTGCCCACTTCCATGCTGAGTGATGCTCAGGGAAGTGATGCCCGCAGAAGGCGTCTGGGCCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR GCA 72 bp CAGACCCAGCCAGCCCTAATACCCAGCCTGAAGACATaGAGTTGCTCTGGTGACCAATGGGGTCACAGCAAC +
Preference number: 3 (lower is better)
Translates to: QTQPALIPSLKT*SCSGDQWGHSN
Trigger: GTTGCTGTGACCCCATTGGTCACCAGAGCAACTGCATGTCTTCAGGCTGGGTATTAGGGCTGGCTGGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR GCA 72 bp CAGCCAGCCCTAATACCCAGCCTGAAGACATGCAGTTaGTCTGGTGACCAATGGGGTCACAGCAACTATGGG +
Preference number: 3 (lower is better)
Translates to: QPALIPSLKTCS*SGDQWGHSNYG
Trigger: CCCATAGTTGCTGTGACCCCATTGGTCACCAGAGCAACTGCATGTCTTCAGGCTGGGTATTAGGGCTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 72 bp GTGGTGAGAAGAGAGCAGGCATTGGCTTATGTCCAGTaGAGATGGCGGAAGGGGAGAAGAAGGAAGGCCGAA +
Preference number: 3 (lower is better)
Translates to: VVRREQALAYVQ*RWRKGRRRKAE
Trigger: TTCGGCCTTCCTTCTTCTCCCCTTCCGCCATCTCCACTGGACATAAGCCAATGCCTGCTCTCTTCTCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 72 bp ATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTaGGCAGGGGCTGCCTCCAAGTCTCAGTTATGCATG +
Preference number: 3 (lower is better)
Translates to: IPIPRCLRNSVK*AGAASKSQLCM
Trigger: CATGCATAACTGAGACTTGGAGGCAGCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 72 bp GTATGGCTCTGGGTCACTGTTAGCGTGGTGCTGTCATaGTCGGGCTACCCACATGGGTTAGAGACAAATGCT +
Preference number: 3 (lower is better)
Translates to: VWLWVTVSVVLS*SGYPHGLETNA
Trigger: AGCATTTGTCTCTAACCCATGTGGGTAGCCCGACCATGACAGCACCACGCTAACAGTGACCCAGAGCCATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 72 bp TGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTaGAAGCCTTTGATACCAATCCCGAGGTGCCTAAGG +
Preference number: 3 (lower is better)
Translates to: WSRIHHAFSRRQ*KPLIPIPRCLR
Trigger: CCTTAGGCACCTCGGGATTGGTATCAAAGGCTTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 72 bp TGGCTCCCTCTGAACATCCTGATACCTGGTCTCAAGTaGAGCCGCATACATCATGCCTTCAGCAGAAGGCAG +
Preference number: 3 (lower is better)
Translates to: WLPLNILIPGLK*SRIHHAFSRRQ
Trigger: CTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTATCAGGATGTTCAGAGGGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 72 bp GTAGACAACCTGCTAGAAGTGTTTGAATGCCTCCTCTaGGTTTTGGTCTCCCCTGCAGCACCGCCCATCTCT +
Preference number: 3 (lower is better)
Translates to: VDNLLEVFECLL*VLVSPAAPPIS
Trigger: AGAGATGGGCGGTGCTGCAGGGGAGACCAAAACTCAGAGGAGGCATTCAAACACTTCTAGCAGGTTGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR GCA 72 bp CCTGATACCTGGTCTCAAGTGGAGCCGCATACATCATaGCTTCAGCAGAAGGCAGTGGAAGCCTTTGATACC +
Preference number: 3 (lower is better)
Translates to: PDTWSQVEPHTS*LQQKAVEAFDT
Trigger: GGTATCAAAGGCTTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTATCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 72 bp GTGCCTTGGAGAAAGAACCCTCGCATGCTCCTCAGATaGCACAAAATGGGTAGAATCATCAGACCCAGCCAG +
Preference number: 3 (lower is better)
Translates to: VPWRKNPRMLLR*HKMGRIIRPSQ
Trigger: CTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGAGGAGCATGCGAGGGTTCTTTCTCCAAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACCATTTCTTGTCCAGTTaGAGACACTCTGGCCTGATT +
Preference number: 3 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHHFLSS*RHSGLI
Trigger: AATCAGGCCAGAGTGTCTCAAACTGGACAAGAAATG...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACAGGCAGAAGGATAATTaGCAGTCCTGCTATTCTAGG +
Preference number: 3 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHRQKDN*QSCYSR
Trigger: CCTAGAATAGCAGGACTGCAAATTATCCTTCTGCCT...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTAGCTGTGGCAGCCATCTaGGTCCATGAGGTGGATGCA +
Preference number: 3 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLAVAAI*VHEVDA
Trigger: TGCATCCACCTCATGGACCAAGATGGCTGCCACAGC...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGCTAAGTTCCTATTCTTaGGGCCAAGCTTTTAAAAAC +
Preference number: 3 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLALSSYS*GQAFKN
Trigger: GTTTTTAAAAGCTTGGCCCAAAGAATAGGAACTTAG...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCCAGATCAGGGTATTCTaGTGTAAGTCCAACCCAGCT +
Preference number: 3 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFQIRVF*CKSNPA
Trigger: AGCTGGGTTGGACTTACACAAGAATACCCTGATCTG...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 72 bp CATAAAGAGCTGGCTCCCTCTGAACATCCTGATACCTaGTCTCAAGTGGAGCCGCATACATCATGCCTTCAG +
Preference number: 3 (lower is better)
Translates to: HKELAPSEHPDT*SQVEPHTSCLQ
Trigger: CTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTATCAGGATGTTCAGAGGGAGCCAGCTCTTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 72 bp CAGATGTTGCTGGTGTTTATAGCTAGGCCAGTCCTCTaGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTC +
Preference number: 3 (lower is better)
Translates to: QMLLVFIARPVL*KFLHLCQAGWF
Trigger: GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTATAAACACCAGCAACATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGAATGCTTCTGGGAAATaGCAGCTGGCTTCTTGCATT +
Preference number: 3 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQNASGK*QLASCI
Trigger: AATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATT...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCTCTATTCTTATCTCCTaGCTAGGTCTATCCTGGGGA +
Preference number: 3 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFSILIS*LGLSWG
Trigger: TCCCCAGGATAGACCTAGCAAGGAGATAAGAATAGA...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 72 bp CCTAATACCCAGCCTGAAGACATGCAGTTGCTCTGGTaGCCAATGGGGTCACAGCAACTATGGGAAAGGAAA +
Preference number: 3 (lower is better)
Translates to: PNTQPEDMQLLW*PMGSQQLWERK
Trigger: TTTCCTTTCCCATAGTTGCTGTGACCCCATTGGTCACCAGAGCAACTGCATGTCTTCAGGCTGGGTATTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR GCA 72 bp GAAGGCCGAAAGTGCCTTGGAGAAAGAACCCTCGCATaGTCCTCAGATGGCACAAAATGGGTAGAATCATCA +
Preference number: 3 (lower is better)
Translates to: EGRKCLGERTLA*SSDGTKWVESS
Trigger: TGATGATTCTACCCATTTTGTGCCATCTGAGGAGCATGCGAGGGTTCTTTCTCCAAGGCACTTTCGGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 72 bp GTCGGGCTACCCACATGGGTTAGAGACAAATGCTTCTaGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAG +
Preference number: 3 (lower is better)
Translates to: VGLPTWVRDKCF*EIAAGFLHYWQ
Trigger: CTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGTCTCTAACCCATGTGGGTAGCCCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAATGCAGCACATTTCTaGTCCAGTTTGAGACACTCT +
Preference number: 3 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGNAAHF*SSLRHS
Trigger: AGAGTGTCTCAAACTGGACAAGAAATGTGCTGCATT...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 72 bp GTAGCTCACACAGGTTCCACTGAGTGTGCCAAAGGATaGCAGTTGCAATCCTTTCCACAGACATCTTGGAAC +
Preference number: 3 (lower is better)
Translates to: VAHTGSTECAKG*QLQSFPQTSWN
Trigger: GTTCCAAGATGTCTGTGGAAAGGATTGCAACTGTCATCCTTTGGCACACTCAGTGGAACCTGTGTGAGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR GCA 72 bp GTCATGGTCGGGCTACCCACATGGGTTAGAGACAAATaGTTCTGGGAAATTGCAGCTGGCTTCTTGCATTAT +
Preference number: 3 (lower is better)
Translates to: VMVGLPTWVRDK*FWEIAAGFLHY
Trigger: ATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGTCTCTAACCCATGTGGGTAGCCCGACCATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR GCA 72 bp ACACAGGTTCCACTGAGTGTGCCAAAGGATGACAGTTaGAATCCTTTCCACAGACATCTTGGAACACAGGCT +
Preference number: 3 (lower is better)
Translates to: TQVPLSVPKDDS*NPFHRHLGTQA
Trigger: AGCCTGTGTTCCAAGATGTCTGTGGAAAGGATTGCAACTGTCATCCTTTGGCACACTCAGTGGAACCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 72 bp CCCATGTCGGTCTTTTTAATTTGCTTAGTACTGGCCTaGGGCCAACATAAAGAGCTGGCTCCCTCTGAACAT +
Preference number: 3 (lower is better)
Translates to: PMSVFLICLVLA*GQHKELAPSEH
Trigger: ATGTTCAGAGGGAGCCAGCTCTTTATGTTGGCCCCAGGCCAGTACTAAGCAAATTAAAAAGACCGACATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 72 bp GGGCATCACTTCCCTGAGCATCACTCAGCATGGAAGTaGGCAGTCCATTTTTGGAGAATAAACTGTATCCCT +
Preference number: 3 (lower is better)
Translates to: GHHFPEHHSAWK*AVHFWRINCIP
Trigger: AGGGATACAGTTTATTCTCCAAAAATGGACTGCCCACTTCCATGCTGAGTGATGCTCAGGGAAGTGATGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 72 bp TTCTGCGGGCATCACTTCCCTGAGCATCACTCAGCATaGAAGTGGGCAGTCCATTTTTGGAGAATAAACTGT +
Preference number: 3 (lower is better)
Translates to: FCGHHFPEHHSA*KWAVHFWRINC
Trigger: ACAGTTTATTCTCCAAAAATGGACTGCCCACTTCCATGCTGAGTGATGCTCAGGGAAGTGATGCCCGCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGACTGCCTAAAAAGTCATaGATCTCTCAGCTCATTGAT +
Preference number: 3 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGLPKKS*ISQLID
Trigger: ATCAATGAGCTGAGAGATCAATGACTTTTTAGGCAG...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGACAAGCAACATTTACTaGGCCCCTTTTAACTTACTC +
Preference number: 3 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQTSNIY*APFNLL
Trigger: GAGTAAGTTAAAAGGGGCCAAGTAAATGTTGCTTGT...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTAGTGGGCAGTCCATTTTaGGAGAATAAACTGTATCCC +
Preference number: 3 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLVGSPF*ENKLYP
Trigger: GGGATACAGTTTATTCTCCAAAAATGGACTGCCCAC...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAGTCGGTCTTTTTAATTaGCTTAGTACTGGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: EPAHLLRRANLKSQGISSVGLFN*LSTGLG
Trigger: CCCCAGGCCAGTACTAAGCAAATTAAAAAGACCGAC...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 72 bp TTAGGTAGGACGAGCCCTTATTCCATATGGATATGGTaGCGGAGTAAAGAGAACTTGACCTTTGCAGTCAGC +
Preference number: 3 (lower is better)
Translates to: LGRTSPYSIWIW*RSKENLTFAVS
Trigger: GCTGACTGCAAAGGTCAAGTTCTCTTTACTCCGTCACCATATCCATATGGAATAAGGGCTCGTCCTACCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 72 bp GGGTATTCTTGTGTAAGTCCAACCCAGCTTTCTCTTTaGTCTGATCCTTCCAACTCAGCTTTCAGTCCCTAC +
Preference number: 3 (lower is better)
Translates to: GYSCVSPTQLSL*SDPSNSAFSPY
Trigger: GTAGGGACTGAAAGCTGAGTTGGAAGGATCAGATCAAAGAGAAAGCTGGGTTGGACTTACACAAGAATACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 72 bp TCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATaGCCTATATGGGATGCACTCCTACCCTACTTAATA +
Preference number: 3 (lower is better)
Translates to: SFFGVALLGLLK*PIWDALLPYLI
Trigger: TATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCCATCCAAGCCATAATTaGGCTTTTCATGTGTGCCTC +
Preference number: 3 (lower is better)
Translates to: ERVFWRLRSGLGKASLNIHPSHN*AFHVCL
Trigger: GAGGCACACATGAAAAGCCAAATTATGGCTTGGATG...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAAGCTCCTTGAAGGGATaGATCAGATCAATCCGTTGT +
Preference number: 3 (lower is better)
Translates to: EPAHLLRRANLKSQGISSSSLKG*IRSIRC
Trigger: ACAACGGATTGATCTGATCAATCCCTTCAAGGAGCT...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTAGCTCCTTGAAGGGATaGATCAGATCAATCCGTTGT +
Preference number: 3 (lower is better)
Translates to: TNASGKLQLASCIIGRKLSSLKG*IRSIRC
Trigger: ACAACGGATTGATCTGATCAATCCCTTCAAGGAGCT...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAAGGCAGAAGGATAATTaGCAGTCCTGCTATTCTAGG +
Preference number: 3 (lower is better)
Translates to: EPAHLLRRANLKSQGISSRQKDN*QSCYSR
Trigger: CCTAGAATAGCAGGACTGCAAATTATCCTTCTGCCT...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGCACATATACACAAAGTaGTCTCATCCTAATCTCCAA +
Preference number: 3 (lower is better)
Translates to: SDGTKWVESSDPASPNTQHIYTK*SHPNLQ
Trigger: TTGGAGATTAGGATGAGACAACTTTGTGTATATGTG...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 72 bp GAGCACATTCCCTCGGCCTTCATATTGAATAGGTTTTaGGTTGGATGGAGTAGACAACCTGCTAGAAGTGTT +
Preference number: 3 (lower is better)
Translates to: EHIPSAFILNRF*VGWSRQPARSV
Trigger: AACACTTCTAGCAGGTTGTCTACTCCATCCAACTCAAAACCTATTCAATATGAAGGCCGAGGGAATGTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR GCA 72 bp TTCCAACTCAGCTTTCAGTCCCTACAACCATTCCAATaGTCTGGTCCTGTCTCAAGATCCTCTTCATTCATT +
Preference number: 3 (lower is better)
Translates to: FQLSFQSLQPFQ*SGPVSRSSSFI
Trigger: AATGAATGAAGAGGATCTTGAGACAGGACCAGAGCATTGGAATGGTTGTAGGGACTGAAAGCTGAGTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 72 bp ATAATTTGGCTTTTCATGTGTGCCTCTGTGGGTTCCTaGTACCCAAACTATTCTATGCTCCTGCAAAGGAGA +
Preference number: 3 (lower is better)
Translates to: IIWLFMCASVGS*YPNYSMLLQRR
Trigger: TCTCCTTTGCAGGAGCATAGAATAGTTTGGGTACCAGGAACCCACAGAGGCACACATGAAAAGCCAAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 72 bp CCTAAAAGATGGAAGGAAAGGCATGGCTTAAGGTTATaGTGTCAGGATTTTGTAGGATGTGGGTCTCTAGCA +
Preference number: 3 (lower is better)
Translates to: PKRWKERHGLRL*CQDFVGCGSLA
Trigger: TGCTAGAGACCCACATCCTACAAAATCCTGACACCATAACCTTAAGCCATGCCTTTCCTTCCATCTTTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CCA 72 bp GAGCATCACTCAGCATGGAAGTGGGCAGTCCATTTTTaGAGAATAAACTGTATCCCTACCTCTCCATTTCTA +
Preference number: 3 (lower is better)
Translates to: EHHSAWKWAVHF*RINCIPTSPFL
Trigger: TAGAAATGGAGAGGTAGGGATACAGTTTATTCTCCAAAAATGGACTGCCCACTTCCATGCTGAGTGATGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAAAATGCTTCTGGGAAATaGCAGCTGGCTTCTTGCATT +
Preference number: 3 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQNASGK*QLASCI
Trigger: AATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATT...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTAGTACTGGAGCTTCCATaGCCAAGAGAAGGGAAAGAA +
Preference number: 3 (lower is better)
Translates to: YSYLLARSILGTFLPILVVLELP*PREGKE
Trigger: TTCTTTCCCTTCTCTTGGCAATGGAAGCTCCAGTAC...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAATCCTGGGGACCTTCTaGCCAATATTAGTACTATCT +
Preference number: 3 (lower is better)
Translates to: EPAHLLRRANLKSQGISSILGTF*PILVLS
Trigger: AGATAGTACTAATATTGGCAAGAAGGTCCCCAGGAT...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTAAGCTGTAAAACCAGTTaGCCTTTAAGTAAGAGAGAA +
Preference number: 3 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLSCKTS*PLSKRE
Trigger: TTCTCTCTTACTTAAAGGCAAACTGGTTTTACAGCT...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 72 bp CAGCTCCTTGAAGGGATTGATCAGATCAATCCGTTGTaGAACTTCCCACTCACTCTGATCCTCCTAATAAAT +
Preference number: 3 (lower is better)
Translates to: QLLEGIDQINPL*NFPLTLILLIN
Trigger: ATTTATTAGGAGGATCAGAGTGAGTGGGAAGTTTCACAACGGATTGATCTGATCAATCCCTTCAAGGAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 72 bp CAATACCCATTTGTTGTGCAGAATATATTTAAGGTATaGAAAGGGCCTCGTTCAGTTCCTGGAGCAAGGGAG +
Preference number: 3 (lower is better)
Translates to: QYPFVVQNIFKV*KGPRSVPGARE
Trigger: CTCCCTTGCTCCAGGAACTGAACGAGGCCCTTTTCATACCTTAAATATATTCTGCACAACAAATGGGTATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 72 bp ATTCCATATGGATATGGTGACGGAGTAAAGAGAACTTaGCCTTTGCAGTCAGCTAGACCTAGCTTACAACCT +
Preference number: 3 (lower is better)
Translates to: IPYGYGDGVKRT*PLQSARPSLQP
Trigger: AGGTTGTAAGCTAGGTCTAGCTGACTGCAAAGGTCAAGTTCTCTTTACTCCGTCACCATATCCATATGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 72 bp TTTCAGAACCTGCCCACTTGCTCAGAAGGGCTAATTTaGAGTCTCAAGGAATTAGTTCAGATTTGTCCAGGT +
Preference number: 3 (lower is better)
Translates to: FQNLPTCSEGLI*SLKELVQICPG
Trigger: ACCTGGACAAATCTGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAACTGCCTAAAAAGTCATaGATCTCTCAGCTCATTGAT +
Preference number: 3 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQLPKKS*ISQLID
Trigger: ATCAATGAGCTGAGAGATCAATGACTTTTTAGGCAG...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCATTACATTTCATATTCTaGCAGTTCCCAATCCCAGTA +
Preference number: 3 (lower is better)
Translates to: EPAHLLRRANLKSQGISSLHFIF*QFPIPV
Trigger: TACTGGGATTGGGAACTGCAAGAATATGAAATGTAA...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR-3UTR CAA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAACTAAGTTCCTATTCTTaGGGCCAAGCTTTTAAAAAC +
Preference number: 3 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQLSSYS*GQAFKN
Trigger: GTTTTTAAAAGCTTGGCCCAAAGAATAGGAACTTAG...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 72 bp TCCTATTTAGCACACAAGAATGTAATGAGGACCAAATaGGACAGCACATGCAAAAATGTTCTGAAAACCATT +
Preference number: 3 (lower is better)
Translates to: SYLAHKNVMRTK*DSTCKNVLKTI
Trigger: AATGGTTTTCAGAACATTTTTGCATGTGCTGTCTCATTTGGTCCTCATTACATTCTTGTGTGCTAAATAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR TCA 72 bp TTTAATAACAGAACCTCCTATGCTTATCAAGGCACATaGCAATCAATAATAAAGACATTCCCTAGCCTTCTT +
Preference number: 3 (lower is better)
Translates to: FNNRTSYAYQGT*QSIIKTFPSLL
Trigger: AAGAAGGCTAGGGAATGTCTTTATTATTGATTGTCATGTGCCTTGATAAGCATAGGAGGTTCTGTTATTAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCCGCTCGCCGCAAGTTTaGAGAGCGGCCCCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCRSPQV*RAAPAA
Trigger: CGCTGCGGGGGCCGCTCTGCAAACTTGCGGCGAGCG...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR CCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCCAGGCGCTCAGGCGCTaGGGAGCGGGGTTCGGGTCC +
Preference number: 4 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGQALRR*GAGFGS
Trigger: GGACCCGAACCCCGCTCCCCAGCGCCTGAGCGCCTG...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR CCA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGCTCGCACACACAGGCTaGCACCGCCACAACCCGCCA +
Preference number: 4 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLALAHTG*HRHNPP
Trigger: TGGCGGGTTGTGGCGGTGCCAGCCTGTGTGTGCGAG...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR GCA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGCGGTCCCTCTGGTaGTCTAGCTGCTTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLAWRSLW*SSCLVW
Trigger: CCACACCAAGCAGCTAGAGCACCAGAGGGACCGCCA...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTCCACGAAGAGGAGAGTaGGCACCGGCGTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMAPRRGE*APASAA
Trigger: GGCTGCTGACGCCGGTGCTCACTCTCCTCTTCGTGG...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR TCA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCCGGGCATCACTTCCCTaGGCATCACTCAGCATGGAA +
Preference number: 4 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCRASLP*ASLSME
Trigger: TTCCATGCTGAGTGATGCTCAGGGAAGTGATGCCCG...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTGCCACGTCTCCTTCTTaGCAGGCCGGTGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMAATSPS*QAGGRC
Trigger: GCACCTGCCACCGGCCTGGCAAGAAGGAGACGTGGC...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR GCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCGGCCCAGACGCCTTCTaGGGGCATCACTTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGGPDAF*GHHFPE
Trigger: CTCAGGGAAGTGATGCCCGCAGAAGGCGTCTGGGCC...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTTCCTCCCGCCGCTTCTaGCGGTCCCTCTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMASSRRF*RSLWCS
Trigger: AGAGCACCAGAGGGACCGCCAGAAGCGGCGGGAGGA...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTTGGAGGGGGCTGGACTaGCCCAAGGCAGTATGGCTC +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMAWRGLD*PKAVWL
Trigger: GAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCA...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTCACTGTTAGCGTGGTaGTGTCATGGTCGGGCTACC +
Preference number: 4 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLASLLAW*CHGRAT
Trigger: GGTAGCCCGACCATGACAGCACCACGCTAACAGTGA...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGTCCTCCCGCCGCTTCTaGCGGTCCCTCTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQSSRRF*RSLWCS
Trigger: AGAGCACCAGAGGGACCGCCAGAAGCGGCGGGAGGA...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp AGGGAGCCACCCGATAATGCCTTCCCTTGCACCCCAGATGAAGCCAAGCACAGTATCTGGTGGAGCTGCTaGACTTCCCTCGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: REPPDNAFPCTPDEAKHSIWWSC*TSLGAG
Trigger: ACCTGCCCCGAGGGAAGTCCAGCAGCTCCACCAGAT...ACTGTGCTTGGCTTCATCTGGGGTGCAAGGGAAGGCATTATCGGGTGGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCGCCTCCTCTGAGTTTTaGTCTCCCCTGCAGCACCGC +
Preference number: 4 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGASSEF*SPLQHR
Trigger: GCGGTGCTGCAGGGGAGACCAAAACTCAGAGGAGGC...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCTGCTCTGGTGACCAATaGGGTCACAGCAACTATGGG +
Preference number: 4 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCCSGDQ*GHSNYG
Trigger: CCCATAGTTGCTGTGACCCCATTGGTCACCAGAGCA...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCTGGAGGGGGCTGGACTaGCCCAAGGCAGTATGGCTC +
Preference number: 4 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFWRGLD*PKAVWL
Trigger: GAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCA...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTAGGAACAGCGTGAAGTaGGCAGGGGCTGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMARNSVK*AGAASK
Trigger: CTTGGAGGCAGCCCCTGCTCACTTCACGCTGTTCCT...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTTGGCGGTCCCTCTGGTaGTCTAGCTGCTTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMAWRSLW*SSCLVW
Trigger: CCACACCAAGCAGCTAGAGCACCAGAGGGACCGCCA...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCCTGAAGACATGCAGTTaGTCTGGTGACCAATGGGGT +
Preference number: 4 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCLKTCS*SGDQWG
Trigger: ACCCCATTGGTCACCAGAGCAACTGCATGTCTTCAG...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGCCCAGCCTGAAGACATaGAGTTGCTCTGGTGACCAA +
Preference number: 4 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLAPSLKT*SCSGDQ
Trigger: TTGGTCACCAGAGCAACTGCATGTCTTCAGGCTGGG...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCTCCTCTGGAAATTTCTaGACCTCTGCCAGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCSSGNF*TSARQV
Trigger: AACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGA...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTATGTCCAGTGGAGATaGCGGAAGGGGAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLAYVQWR*RKGRRR
Trigger: CCTTCTTCTCCCCTTCCGCCATCTCCACTGGACATA...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp AGAATGGCTCAGCTTCTCCAAGGTACCTCAACAGAAAGTCAATGTGCCTGCTCAGTTCCTCCATGCCCCTaGCGCCGAGGCGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RMAQLLQGTSTESQCACSVPPCP*RRGVWL
Trigger: CAGCCACACGCCTCGGCGTCAGGGGCATGGAGGAAC...TGAGCAGGCACATTGACTTTCTGTTGAGGTACCTTGGAGAAGCTGAGCCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR TCA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGAGGACCCCATGGGTATaGCAAGCTTGCTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLARTPWV*QACCFR
Trigger: TCTAAAGCAGCAAGCTTGTCATACCCATGGGGTCCT...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTCACACAGGTTCCACTaGGTGTGCCAAAGGATGACA +
Preference number: 4 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLASHRFH*VCQRMT
Trigger: TGTCATCCTTTGGCACACTCAGTGGAACCTGTGTGA...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAGTTGGTGCAGGAGCTaGTGCAGGAGGGGGACACGT +
Preference number: 4 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGSWCRS*CRRGTR
Trigger: ACGTGTCCCCCTCCTGCACCAGCTCCTGCACCAACT...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR CCA 90 bp AGGGAGCCACCCGATAATGCCTTCCCTTGCACCCCAGATGAAGCCAAGCACAGTCAAGTGGCCCCTCTCTaGACATGTTTCCACTCGCTC +
Preference number: 4 (lower is better)
Translates to: REPPDNAFPCTPDEAKHSQVAPL*TCFHSL
Trigger: GAGCGAGTGGAAACATGTCCAGAGAGGGGCCACTTG...ACTGTGCTTGGCTTCATCTGGGGTGCAAGGGAAGGCATTATCGGGTGGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCCAACCTCCCCTGTCCTaGATCCACTCCCCGTTCCCT +
Preference number: 4 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFQPPLS*IHSPFP
Trigger: AGGGAACGGGGAGTGGATCCAGGACAGGGGAGGTTG...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGATCTGGTGGAGCTGCTaGACTTCCCTCGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQIWWSC*TSLGAG
Trigger: ACCTGCCCCGAGGGAAGTCCAGCAGCTCCACCAGAT...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAGCCTCGTTCAGTTCCTaGAGCAAGGGAGCCACCCGA +
Preference number: 4 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVEASFSS*SKGATR
Trigger: TCGGGTGGCTCCCTTGCTCCAGGAACTGAACGAGGC...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAAGCGTGGTGCTGTCATaGTCGGGCTACCCACATGGG +
Preference number: 4 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVESVVLS*SGYPHG
Trigger: CCCATGTGGGTAGCCCGACCATGACAGCACCACGCT...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGCTCCAATCTGGGTACTaGAGCTTCCATTGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLALQSGY*SFHCQE
Trigger: CTCTTGGCAATGGAAGCTCCAGTACCCAGATTGGAG...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAGCCTCCTCTGAGTTTTaGTCTCCCCTGCAGCACCGC +
Preference number: 4 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVEASSEF*SPLQHR
Trigger: GCGGTGCTGCAGGGGAGACCAAAACTCAGAGGAGGC...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCTGGAGCCGCGAGGGCTaGCGGCGCTCGCCGCAAGTT +
Preference number: 4 (lower is better)
Translates to: ERVFWRLRSGLGKASLNIWSREG*RRSPQV
Trigger: AACTTGCGGCGAGCGCCGTCAGCCCTCGCGGCTCCA...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR GCA 90 bp AGAATGGCTCAGCTTCTCCAAGGTACCTCAACAGAAAGTCAATGTGCCTGCTCACACTGGTGGTCCCTGTaGTCTCGCTGCAGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: RMAQLLQGTSTESQCACSHWWSL*SRCSLR
Trigger: GCGGAGGCTGCAGCGAGAGCACAGGGACCACCAGTG...TGAGCAGGCACATTGACTTTCTGTTGAGGTACCTTGGAGAAGCTGAGCCATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCGTTAGCATGAGTCCTTaGCTAGAAGTTCAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCVSMSP*LEVQGL
Trigger: AAGCCCTTGAACTTCTAGGCAAGGACTCATGCTAAC...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAGGTGCTCTAGCTGCTTaGTGTGGTGGTAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVEGALAA*CGGSAA
Trigger: AGCAGCGCTACCACCACACCAAGCAGCTAGAGCACC...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGATTCTGGCGGTCCCTCTaGTGCTCTAGCTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGFWRSL*CSSCLV
Trigger: CACCAAGCAGCTAGAGCACCAGAGGGACCGCCAGAA...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCTCTTCTTTGGGCCACTaGTGGTCCCTGTGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFSSLGH*WSLCSR
Trigger: GCGAGAGCACAGGGACCACCAGTGGCCCAAAGAAGA...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGCAGCCCCATCTTCTTTaGGCCACTGGTGGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQQPHLL*ATGGPC
Trigger: ACAGGGACCACCAGTGGCCCAAAGAAGATGGGGCTG...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCCCGTTCCCTAAAAGATaGAAGGAAAGGCATGGCTTA +
Preference number: 4 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCPFPKR*KERHGL
Trigger: TAAGCCATGCCTTTCCTTCCATCTTTTAGGGAACGG...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGGGGTCACTGTTAGCGTaGTGCTGTCATGGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQGSLLA*CCHGRA
Trigger: AGCCCGACCATGACAGCACCACGCTAACAGTGACCC...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACTTGGCTTATGTCCAGTaGAGATGGCGGAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHLAYVQ*RWRKGR
Trigger: TCTCCCCTTCCGCCATCTCCACTGGACATAAGCCAA...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGGAAGAGAGCAGGCATTaGCTTATGTCCAGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLAEESRH*LMSSGD
Trigger: ATCTCCACTGGACATAAGCCAATGCCTGCTCTCTTC...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp AGGGAGCCACCCGATAATGCCTTCCCTTGCACCCCAGATGAAGCCAAGCACAGTGCTAGGCCAGTCCTCTaGAAATTTCTGCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: REPPDNAFPCTPDEAKHSARPVL*KFLHLC
Trigger: GCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGC...ACTGTGCTTGGCTTCATCTGGGGTGCAAGGGAAGGCATTATCGGGTGGCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCTCTGCGTTCTCAATCTaGAGTACTGCTAGGTTAGCA +
Preference number: 4 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCSAFSI*STARLA
Trigger: TGCTAACCTAGCAGTACTCCAGATTGAGAACGCAGA...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTTGCAGCACATTAGGATaGCAGAGCAACAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMACSTLG*QSNRRG
Trigger: CCCTCTCCTGTTGCTCTGTCATCCTAATGTGCTGCA...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCTTTGAATGCCTCCTCTaGGTTTTGGTCTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGFECLL*VLVSPA
Trigger: TGCAGGGGAGACCAAAACTCAGAGGAGGCATTCAAA...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTATTCGGGTCCTGGACCTaGCGCGCGCAGCCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: YSYLLARSILGTFLPILVFGSWT*RAQPGS
Trigger: GCTGCCCGGCTGCGCGCGGCAGGTCCAGGACCCGAA...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR GCA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTATCCCGCCGGCGGCTTaGAGGCGCTCAGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: WPIWDALLPYLISPIAKCIPPAA*RRSGAG
Trigger: CCCAGCGCCTGAGCGCCTGCAAGCCGCCGGCGGGAT...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR GCA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTTCCCTGTGCTCTCGCTaGAGCCTCCGCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: TNASGKLQLASCIIGRKLSLCSR*SLRSSR
Trigger: GCGGGAGGAGCGGAGGCTGCAGCGAGAGCACAGGGA...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAGGTGACAGTCCCTTCTaGAGCCCCATCTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGGDSPF*SPIFFG
Trigger: CCCAAAGAAGATGGGGCTGCAGAAGGGACTGTCACC...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAGGTGACAGTCCCTTCTaGAGCCCCATCTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVEGDSPF*SPIFFG
Trigger: CCCAAAGAAGATGGGGCTGCAGAAGGGACTGTCACC...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCATAAGAACTCGGCAATaGAGCACATTTCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCIRTRQ*STFLVQ
Trigger: CTGGACAAGAAATGTGCTGCATTGCCGAGTTCTTAT...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGTCACTGTTAGCGTGGTaGTGTCATGGTCGGGCTACC +
Preference number: 4 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQSLLAW*CHGRAT
Trigger: GGTAGCCCGACCATGACAGCACCACGCTAACAGTGA...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACAAGGAAGGCCGAAAGTaGCTTGGAGAAAGAACCCTC +
Preference number: 4 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHKEGRK*LGERTL
Trigger: GAGGGTTCTTTCTCCAAGGCACTTTCGGCCTTCCTT...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTACAGGTTTCAGAACCTaGCCACTTGCTCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMATGFRT*PLAQKG
Trigger: GCCCTTCTGAGCAAGTGGGCAGGTTCTGAAACCTGT...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTAGCTGCTCCCCGAAGTTaGTGCAGGAGCTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLAAPRS*CRSWCR
Trigger: CCTGCACCAGCTCCTGCACCAACTTCGGGGAGCAGC...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR CCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCCAAGTGGCCCCTCTCTaGACATGTTTCCACTCGCTC +
Preference number: 4 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFQVAPL*TCFHSL
Trigger: GAGCGAGTGGAAACATGTCCAGAGAGGGGCCACTTG...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGAGATCCTCAATGCGTTaGCGGGCACCCTCGTTGATC +
Preference number: 4 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQRSSMR*RAPSLI
Trigger: GATCAACGAGGGTGCCCGCCAACGCATTGAGGATCT...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGCTTGGCCTTCTAAAATaGCCTATATGGGATGCACTC +
Preference number: 4 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLALGLLK*PIWDAL
Trigger: GAGTGCATCCCATATAGGCCATTTTAGAAGGCCAAG...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACCGGTGTGGCTCTCCTTaGCCTTCTAAAATGGCCTAT +
Preference number: 4 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHRCGSP*PSKMAY
Trigger: ATAGGCCATTTTAGAAGGCCAAGGAGAGCCACACCG...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCGTCGGGCTACCCACATaGGTTAGAGACAAATGCTTC +
Preference number: 4 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGVGLPT*VRDKCF
Trigger: GAAGCATTTGTCTCTAACCCATGTGGGTAGCCCGAC...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCATACCTGGTCTCAAGTaGAGCCGCATACATCATGCC +
Preference number: 4 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGIPGLK*SRIHHA
Trigger: GGCATGATGTATGCGGCTCCACTTGAGACCAGGTAT...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCGAACATCCTGATACCTaGTCTCAAGTGGAGCCGCAT +
Preference number: 4 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGEHPDT*SQVEPH
Trigger: ATGCGGCTCCACTTGAGACCAGGTATCAGGATGTTC...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACTGCTTAGTACTGGCCTaGGGCCAACATAAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHCLVLA*GQHKEL
Trigger: CAGCTCTTTATGTTGGCCCCAGGCCAGTACTAAGCA...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTAGGCCGAAAGTGCCTTaGAGAAAGAACCCTCGCATG +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMARPKVP*RKNPRM
Trigger: CATGCGAGGGTTCTTTCTCCAAGGCACTTTCGGCCT...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGCTTCCATCACACATATaGAGAGAGGTTTTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLALPSHI*REVFQV
Trigger: CACTTGGAAAACCTCTCTTCATATGTGTGATGGAAG...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGTGTTGTAGTCCTCGGTaGCAGTCCCTTCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SDGTKWVESSDPASPNTQCCSPR*QSLLQP
Trigger: GGGCTGCAGAAGGGACTGTCACCGAGGACTACAACA...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGATCCTAACAATGAGATaGGAAGCTAGAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLAILTMR*EARERE
Trigger: CTCTCTCTCTCTAGCTTCTCATCTCATTGTTAGGAT...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGGCTTTCTCTTTGATCTaGTCCTTCCAACTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLAAFSLI*SFQLSF
Trigger: AAAGCTGAGTTGGAAGGATCAGATCAAAGAGAAAGC...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGATTGCAGCTACAAGGCTaGTCCAGCCGGATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGLQLQG*SSRMFF
Trigger: GAAGAACATCCGGCTGGAGCAGCCTTGTAGCTGCAA...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR GCA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAGTTTAGATCCTCAATaGGTTGGCGGGCACCCTCGT +
Preference number: 4 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGSLDPQ*VGGHPR
Trigger: ACGAGGGTGCCCGCCAACGCATTGAGGATCTAAACT...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCCACTGGTGGTCCCTGTaGTCTCGCTGCAGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: ERVFWRLRSGLGKASLNIHWWSL*SRCSLR
Trigger: GCGGAGGCTGCAGCGAGAGCACAGGGACCACCAGTG...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGAACAGAAAGTCAATGTaGCTGCTCACCCTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQNRKSM*LLTLPL
Trigger: GAGGGGGAGGGTGAGCAGGCACATTGACTTTCTGTT...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTATACCAATCCCGAGGTaGCTAAGGAACAGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMAIPIPR*LRNSVK
Trigger: CTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTAT...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGGAGCCGCATACATCATaGCTTCAGCAGAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQEPHTS*LQQKAV
Trigger: CACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTC...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAGAGGGGGACACGTACTaGTACATGATGACCACGAAG +
Preference number: 4 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGEGDTY*YMMTTK
Trigger: CTTCGTGGTCATCATGTACCAGTACGTGTCCCCCTC...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR CCA 90 bp AGAATGGCTCAGCTTCTCCAAGGTACCTCAACAGAAAGTCAATGTGCCTGCTCATCTTTGGGCCACTGGTaGTCCCTGTGCTCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: RMAQLLQGTSTESQCACSSLGHW*SLCSRC
Trigger: GCAGCGAGAGCACAGGGACCACCAGTGGCCCAAAGA...TGAGCAGGCACATTGACTTTCTGTTGAGGTACCTTGGAGAAGCTGAGCCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACCAGATGTCCTCAGAATaGCTCAGCTTCTCCAAGGTA +
Preference number: 4 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHQMSSE*LSFSKV
Trigger: TACCTTGGAGAAGCTGAGCCATTCTGAGGACATCTG...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACGCCTCTGTGGGTTCCTaGTACCCAAACTATTCTATG +
Preference number: 4 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHASVGS*YPNYSM
Trigger: CATAGAATAGTTTGGGTACCAGGAACCCACAGAGGC...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTCAGCCAAGTGGGGGTTaGTGTAAGACCTCATCTAAG +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMAQPSGG*CKTSSK
Trigger: CTTAGATGAGGTCTTACACCAACCCCCACTTGGCTG...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACCTGATTTACTGGCTGTaGCCACAGTCTAACAACAGG +
Preference number: 4 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHLIYWL*PQSNNR
Trigger: CCTGTTGTTAGACTGTGGCCACAGCCAGTAAATCAG...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTAGCCTCGTTCAGTTCCTaGAGCAAGGGAGCCACCCGA +
Preference number: 4 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLASFSS*SKGATR
Trigger: TCGGGTGGCTCCCTTGCTCCAGGAACTGAACGAGGC...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGATGAAGTCAAAAGGCTaGGGCTCTAAGCAACTTTCT +
Preference number: 4 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLAMKSKG*GSKQLS
Trigger: AGAAAGTTGCTTAGAGCCCCAGCCTTTTGACTTCAT...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGGCTAGGCCAGTCCTCTaGAAATTTCTGCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQARPVL*KFLHLC
Trigger: GCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGC...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGAAACACTGGTTTTTCTaGCAAGATGTCAATCTGGCC +
Preference number: 4 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLAKHWFF*QDVNLA
Trigger: GGCCAGATTGACATCTTGCCAGAAAAACCAGTGTTT...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp AGAATGGCTCAGCTTCTCCAAGGTACCTCAACAGAAAGTCAATGTGCCTGCTCAAGTCCTTCTTCTCCATaGTGGCCGGCACGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RMAQLLQGTSTESQCACSSPSSP*WPARSW
Trigger: CCAACTGCGTGCCGGCCATCATGGAGAAGAAGGACT...TGAGCAGGCACATTGACTTTCTGTTGAGGTACCTTGGAGAAGCTGAGCCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR TCA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTTTCACTCTCGTTCATaGAAGTCAAGTTATAGCAGC +
Preference number: 4 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLAFHSRS*KSSYSS
Trigger: GCTGCTATAACTTGACTTTCATGAACGAGAGTGAAA...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACGGAGTAAAGAGAACTTaGCCTTTGCAGTCAGCTAGA +
Preference number: 4 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHGVKRT*PLQSAR
Trigger: TCTAGCTGACTGCAAAGGTCAAGTTCTCTTTACTCC...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGGGCAGTGGAAGCCTTTaGTACCAATCCCGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMGSGSL*YQSRGA
Trigger: GGCACCTCGGGATTGGTATCAAAGGCTTCCACTGCC...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCTTTGAATGCCTCCTCTaGGTTTTGGTCTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFFECLL*VLVSPA
Trigger: TGCAGGGGAGACCAAAACTCAGAGGAGGCATTCAAA...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp AGGGAGCCACCCGATAATGCCTTCCCTTGCACCCCAGATGAAGCCAAGCACAGTGGGGCGGGTTTATATTaGTTTCCCTTAATAGGGAGT +
Preference number: 4 (lower is better)
Translates to: REPPDNAFPCTPDEAKHSGAGLY*FPLIGS
Trigger: ACTCCCTATTAAGGGAAATCAATATAAACCCGCCCC...ACTGTGCTTGGCTTCATCTGGGGTGCAAGGGAAGGCATTATCGGGTGGCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAGCTCCCCGAAGTTGGTaGAGGAGCTGGTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: EPAHLLRRANLKSQGISSAPRSW*RSWCRR
Trigger: CCTCCTGCACCAGCTCCTGCACCAACTTCGGGGAGC...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR GCA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTTCCCTGTGCTCTCGCTaGAGCCTCCGCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: WPIWDALLPYLISPIAKCSLCSR*SLRSSR
Trigger: GCGGGAGGAGCGGAGGCTGCAGCGAGAGCACAGGGA...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCACTGGAAGCAATATGTaGAACTTCCCTCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGTGSNM*NFPPLP
Trigger: AGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGT...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGAGTTTTGGTCTCCCCTaGAGCACCGCCCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: SDGTKWVESSDPASPNTQSFGLP*STAHLL
Trigger: CAAGAGATGGGCGGTGCTGCAGGGGAGACCAAAACT...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGACCTTGGAGTCACAGCTaGGATCAGATCAGGGTATTC +
Preference number: 4 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGPWSHS*DQIRVF
Trigger: GAATACCCTGATCTGATCGCAGCTGTGACTCCAAGG...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCAAGGAAGGCCGAAAGTaGCTTGGAGAAAGAACCCTC +
Preference number: 4 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFKEGRK*LGERTL
Trigger: GAGGGTTCTTTCTCCAAGGCACTTTCGGCCTTCCTT...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGGGTAGGCAGCTCATCTaGGGTGGGGCTTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMGRQLI*GGASSI
Trigger: GATGGAAGAAGCCCCACCCCAGATGAGCTGCCTACC...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp AGGGAGCCACCCGATAATGCCTTCCCTTGCACCCCAGATGAAGCCAAGCACAGTCACTCTGCAACAGGATaGTGTTTCTTTCACTCTCGT +
Preference number: 4 (lower is better)
Translates to: REPPDNAFPCTPDEAKHSHSATG*CFFHSR
Trigger: ACGAGAGTGAAAGAAACACCATCCTGTTGCAGAGTG...ACTGTGCTTGGCTTCATCTGGGGTGCAAGGGAAGGCATTATCGGGTGGCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp AGAATGGCTCAGCTTCTCCAAGGTACCTCAACAGAAAGTCAATGTGCCTGCTCATTCTGGCGGTCCCTCTaGTGCTCTAGCTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RMAQLLQGTSTESQCACSFWRSL*CSSCLV
Trigger: CACCAAGCAGCTAGAGCACCAGAGGGACCGCCAGAA...TGAGCAGGCACATTGACTTTCTGTTGAGGTACCTTGGAGAAGCTGAGCCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTATCTTCTTTGGGCCACTaGTGGTCCCTGTGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLSSLGH*WSLCSR
Trigger: GCGAGAGCACAGGGACCACCAGTGGCCCAAAGAAGA...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGCAGCCCCATCTTCTTTaGGCCACTGGTGGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMQPHLL*ATGGPC
Trigger: ACAGGGACCACCAGTGGCCCAAAGAAGATGGGGCTG...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCCTGGGAAATTGCAGCTaGCTTCTTGCATTATTGGCA +
Preference number: 4 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGLGNCS*LLALLA
Trigger: TGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAG...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAGAACATCCTGATACCTaGTCTCAAGTGGAGCCGCAT +
Preference number: 4 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGEHPDT*SQVEPH
Trigger: ATGCGGCTCCACTTGAGACCAGGTATCAGGATGTTC...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCGCCAACATAAAGAGCTaGCTCCCTCTGAACATCCTG +
Preference number: 4 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFANIKS*LPLNIL
Trigger: CAGGATGTTCAGAGGGAGCCAGCTCTTTATGTTGGC...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAGCCAACATAAAGAGCTaGCTCCCTCTGAACATCCTG +
Preference number: 4 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGANIKS*LPLNIL
Trigger: CAGGATGTTCAGAGGGAGCCAGCTCTTTATGTTGGC...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCGGGAAAGGAAAACCTTaGAGTCACAGCTGCGATCAG +
Preference number: 4 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFGKGKP*SHSCDQ
Trigger: CTGATCGCAGCTGTGACTCCAAGGTTTTCCTTTCCC...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTCGCATGCTCCTCAGATaGCACAAAATGGGTAGAATC +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMARMLLR*HKMGRI
Trigger: GATTCTACCCATTTTGTGCCATCTGAGGAGCATGCG...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCTTTCCACAGACATCTTaGAACACAGGCTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGFPQTS*NTGSRD
Trigger: GTCTCTTGAGCCTGTGTTCCAAGATGTCTGTGGAAA...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp AGAATGGCTCAGCTTCTCCAAGGTACCTCAACAGAAAGTCAATGTGCCTGCTCATGCTTGTGGGCTGACTaGCTCACAACCCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RMAQLLQGTSTESQCACSCLWAD*LTTPER
Trigger: TCTCTCTGGGGTTGTGAGTCAGTCAGCCCACAAGCA...TGAGCAGGCACATTGACTTTCTGTTGAGGTACCTTGGAGAAGCTGAGCCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTATGCTTGTGGGCTGACTaGCTCACAACCCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLCLWAD*LTTPER
Trigger: TCTCTCTGGGGTTGTGAGTCAGTCAGCCCACAAGCA...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTAGGAACAGCGTGAAGTaGGCAGGGGCTGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TNASGKLQLASCIIGRKLRNSVK*AGAASK
Trigger: CTTGGAGGCAGCCCCTGCTCACTTCACGCTGTTCCT...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp AGGGAGCCACCCGATAATGCCTTCCCTTGCACCCCAGATGAAGCCAAGCACAGTCCTCGGCCTTCATATTaGATAGGTTTTGAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: REPPDNAFPCTPDEAKHSPRPSY*IGFELD
Trigger: ATCCAACTCAAAACCTATTCAATATGAAGGCCGAGG...ACTGTGCTTGGCTTCATCTGGGGTGCAAGGGAAGGCATTATCGGGTGGCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAACCCCCATCTCTAAATaGTCCCACTATACAGGACCT +
Preference number: 4 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVETPISK*SHYTGP
Trigger: AGGTCCTGTATAGTGGGATCATTTAGAGATGGGGGT...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGTCTTCTGACCCGCTTTaGAGCTACAAGGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SDGTKWVESSDPASPNTQSSDPL*SYKAAP
Trigger: TGGAGCAGCCTTGTAGCTGCAAAGCGGGTCAGAAGA...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR GCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGAACAGAAAGTCAATGTaGCTGCTCACCCTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: SDGTKWVESSDPASPNTQNRKSM*LLTLPL
Trigger: GAGGGGGAGGGTGAGCAGGCACATTGACTTTCTGTT...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp AGGGAGCCACCCGATAATGCCTTCCCTTGCACCCCAGATGAAGCCAAGCACAGTATAAGAACTCGGCAATaGAGCACATTTCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: REPPDNAFPCTPDEAKHSIRTRQ*STFLVQ
Trigger: CTGGACAAGAAATGTGCTGCATTGCCGAGTTCTTAT...ACTGTGCTTGGCTTCATCTGGGGTGCAAGGGAAGGCATTATCGGGTGGCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTTTGCAGCTGGCTTCTTaGATTATTGGCAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMALQLAS*IIGRKL
Trigger: AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAA...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCTGGGTTAGAGACAAATaGTTCTGGGAAATTGCAGCT +
Preference number: 4 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGWVRDK*FWEIAA
Trigger: AGCTGCAATTTCCCAGAAGCATTTGTCTCTAACCCA...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCGGCCCAGACGCCTTCTaGGGGCATCACTTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: TYTQSCLILISNLGTGASGPDAF*GHHFPE
Trigger: CTCAGGGAAGTGATGCCCGCAGAAGGCGTCTGGGCC...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTTACTGGAGCTTCCATTaGCAAGAGAAGGGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMAYWSFH*QEKGKN
Trigger: GTTCTTTCCCTTCTCTTGGCAATGGAAGCTCCAGTA...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACGTTGGTTCTTTCACATaGTGTGAAGATGGGTTCATG +
Preference number: 4 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHVGSFT*CEDGFM
Trigger: CATGAACCCATCTTCACAGCATGTGAAAGAACCAAC...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTCTTGGCCTTCTAAAATaGCCTATATGGGATGCACTC +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMALGLLK*PIWDAL
Trigger: GAGTGCATCCCATATAGGCCATTTTAGAAGGCCAAG...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTCAACCTCCCCTGTCCTaGATCCACTCCCCGTTCCCT +
Preference number: 4 (lower is better)
Translates to: TNASGKLQLASCIIGRKLQPPLS*IHSPFP
Trigger: AGGGAACGGGGAGTGGATCCAGGACAGGGGAGGTTG...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGCAGTTTGAGACACTCTaGCCTGATTTACTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQQFETL*PDLLAV
Trigger: CACAGCCAGTAAATCAGGCCAGAGTGTCTCAAACTG...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCCCAGAGAGAGTATTCTaGAGGCTGAGAAGTGGCTTA +
Preference number: 4 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFPERVF*RLRSGL
Trigger: TAAGCCACTTCTCAGCCTCCAGAATACTCTCTCTGG...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGCAGATCTCTATCTGGTaGAGCTGCTGGACTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SDGTKWVESSDPASPNTQQISIW*SCWTSL
Trigger: GAGGGAAGTCCAGCAGCTCCACCAGATAGAGATCTG...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTCTGGGAAATTGCAGCTaGCTTCTTGCATTATTGGCA +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMALGNCS*LLALLA
Trigger: TGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAG...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTAGCGTGGTGCTGTCATaGTCGGGCTACCCACATGGG +
Preference number: 4 (lower is better)
Translates to: TNASGKLQLASCIIGRKLSVVLS*SGYPHG
Trigger: CCCATGTGGGTAGCCCGACCATGACAGCACCACGCT...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAGAGCATCACTCAGCATaGAAGTGGGCAGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVEEHHSA*KWAVHF
Trigger: AAAATGGACTGCCCACTTCCATGCTGAGTGATGCTC...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CAA 72 bp ATACATCATGCCTTCAGCAGAAGGCAGTGGAAGCCTTaGATACCAATCCCGAGGTGCCTAAGGAACAGCGTG +
Preference number: 4 (lower is better)
Translates to: IHHAFSRRQWKP*IPIPRCLRNSV
Trigger: CACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGCTTCCACTGCCTTCTGCTGAAGGCATGATGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCTGTTGTAGTCCTCGGTaGCAGTCCCTTCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ERVFWRLRSGLGKASLNICCSPR*QSLLQP
Trigger: GGGCTGCAGAAGGGACTGTCACCGAGGACTACAACA...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCGGCAGTGGAAGCCTTTaGTACCAATCCCGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: ERVFWRLRSGLGKASLNIGSGSL*YQSRGA
Trigger: GGCACCTCGGGATTGGTATCAAAGGCTTCCACTGCC...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGCTTAATAGGGAGTTGTaGGCACATTCCCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: SDGTKWVESSDPASPNTQLNREL*AHSLGL
Trigger: AAGGCCGAGGGAATGTGCTCACAACTCCCTATTAAG...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTACTATTCTATGCTCCTaGAAAGGAGATCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMATILCS*KGDHRN
Trigger: GTTCCTGTGATCTCCTTTGCAGGAGCATAGAATAGT...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGGGGTTTTACACATTTTaGCTTCAGCTCCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQGFYTF*LQLLEG
Trigger: CCCTTCAAGGAGCTGAAGGCAAAATGTGTAAAACCC...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAATTGCAGCTGGCTTCTTaGATTATTGGCAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVELQLAS*IIGRKL
Trigger: AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAA...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp AGAATGGCTCAGCTTCTCCAAGGTACCTCAACAGAAAGTCAATGTGCCTGCTCAGAAGTGAGCAGGGGCTaGCTCCAAGTCTCAGTTATG +
Preference number: 4 (lower is better)
Translates to: RMAQLLQGTSTESQCACSEVSRG*LQVSVM
Trigger: CATAACTGAGACTTGGAGGCAGCCCCTGCTCACTTC...TGAGCAGGCACATTGACTTTCTGTTGAGGTACCTTGGAGAAGCTGAGCCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCTACTGGAGCTTCCATTaGCAAGAGAAGGGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFYWSFH*QEKGKN
Trigger: GTTCTTTCCCTTCTCTTGGCAATGGAAGCTCCAGTA...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTGTTGGTTCTTTCACATaGTGTGAAGATGGGTTCATG +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMAVGSFT*CEDGFM
Trigger: CATGAACCCATCTTCACAGCATGTGAAAGAACCAAC...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAAAATTTCTGCACCTCTaGCAGGCAGGTTGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVEKFLHL*QAGWFF
Trigger: AAAGAACCAACCTGCCTGGCAGAGGTGCAGAAATTT...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAGGTAGGCAGCTCATCTaGGGTGGGGCTTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: EPAHLLRRANLKSQGISSGRQLI*GGASSI
Trigger: GATGGAAGAAGCCCCACCCCAGATGAGCTGCCTACC...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCCACTCTGCAACAGGATaGTGTTTCTTTCACTCTCGT +
Preference number: 4 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFHSATG*CFFHSR
Trigger: ACGAGAGTGAAAGAAACACCATCCTGTTGCAGAGTG...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp AGGGAGCCACCCGATAATGCCTTCCCTTGCACCCCAGATGAAGCCAAGCACAGTGTATTCCATGTCTCCTaGCCTAATTCCGAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: REPPDNAFPCTPDEAKHSVFHVS*PNSEFL
Trigger: TAAAAACTCGGAATTAGGCCAGGAGACATGGAATAC...ACTGTGCTTGGCTTCATCTGGGGTGCAAGGGAAGGCATTATCGGGTGGCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTACAGATCTCTATCTGGTaGAGCTGCTGGACTTCCCTC +
Preference number: 4 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLQISIW*SCWTSL
Trigger: GAGGGAAGTCCAGCAGCTCCACCAGATAGAGATCTG...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTACTCCAGATCTCTATCTaGTGGAGCTGCTGGACTTCC +
Preference number: 4 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLLQISI*WSCWTS
Trigger: GGAAGTCCAGCAGCTCCACCAGATAGAGATCTGGAG...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTCCCATGAGATGTGACTaGAAGCAATATGTGCAACTT +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMAPMRCD*KQYVQL
Trigger: AAGTTGCACATATTGCTTCCAGTCACATCTCATGGG...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGTATGTCCAGTGGAGATaGCGGAAGGGGAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMYVQWR*RKGRRR
Trigger: CCTTCTTCTCCCCTTCCGCCATCTCCACTGGACATA...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAATTTCCACAGACATCTTaGAACACAGGCTCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVEFPQTS*NTGSRD
Trigger: GTCTCTTGAGCCTGTGTTCCAAGATGTCTGTGGAAA...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTGATCCCGTAACATTGTaGTGTAATAGAAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMADPVTL*CNRNSW
Trigger: CCAGGAATTTCTATTACATCACAATGTTACGGGATC...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR TCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTTTTCACTCTCGTTCATaGAAGTCAAGTTATAGCAGC +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMAFHSRS*KSSYSS
Trigger: GCTGCTATAACTTGACTTTCATGAACGAGAGTGAAA...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGGATCTCTCAGCTCATTaGTGGCTCAGTGATGTGGAG +
Preference number: 4 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMDLSAH*WLSDVE
Trigger: CTCCACATCACTGAGCCATCAATGAGCTGAGAGATC...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAATCCTAACAATGAGATaGGAAGCTAGAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGILTMR*EARERE
Trigger: CTCTCTCTCTCTAGCTTCTCATCTCATTGTTAGGAT...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGTTAACCCATGAGATGTaGCTGGAAGCAATATGTGCA +
Preference number: 4 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQLTHEM*LEAICA
Trigger: TGCACATATTGCTTCCAGTCACATCTCATGGGTTAA...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCCTAGGTTTTAACCCATaGGATGTGACTGGAAGCAAT +
Preference number: 4 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFLGFNP*DVTGSN
Trigger: ATTGCTTCCAGTCACATCTCATGGGTTAAAACCTAG...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGGAGTGTGCCAAAGGATaGCAGTTGCAATCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SDGTKWVESSDPASPNTQECAKG*QLQSFP
Trigger: TGGAAAGGATTGCAACTGTCATCCTTTGGCACACTC...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGTTGGCTTTTCATGTGTaGCTCTGTGGGTTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: SDGTKWVESSDPASPNTQLAFHV*LCGFLV
Trigger: TACCAGGAACCCACAGAGGCACACATGAAAAGCCAA...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAATGCTTCTGGGAAATTaGAGCTGGCTTCTTGCATTA +
Preference number: 4 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGMLLGN*SWLLAL
Trigger: TAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCAT...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCTCCAAGTCTCAGTTATaGATGAATTCCTTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGSKSQL*MNSLPK
Trigger: TTTTGGCAAGGAATTCATGCATAACTGAGACTTGGA...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp AGAATGGCTCAGCTTCTCCAAGGTACCTCAACAGAAAGTCAATGTGCCTGCTCAATACCAATCCCGAGGTaGCTAAGGAACAGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: RMAQLLQGTSTESQCACSIPIPR*LRNSVK
Trigger: CTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTAT...TGAGCAGGCACATTGACTTTCTGTTGAGGTACCTTGGAGAAGCTGAGCCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGAACTGTGTCTTCCTCTaGAACTCAGTGAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SDGTKWVESSDPASPNTQNCVFL*NSVSPK
Trigger: CTTTGGGCTCACTGAGTTCCAGAGGAAGACACAGTT...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCGGTGCTCTAGCTGCTTaGTGTGGTGGTAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: TYTQSCLILISNLGTGASGALAA*CGGSAA
Trigger: AGCAGCGCTACCACCACACCAAGCAGCTAGAGCACC...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTTCTTTGGGCCACTGGTaGTCCCTGTGCTCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: WPIWDALLPYLISPIAKCSLGHW*SLCSRC
Trigger: GCAGCGAGAGCACAGGGACCACCAGTGGCCCAAAGA...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCGGATTTTGTAGGATGTaGGTCTCTAGCAATGGTCAA +
Preference number: 4 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFGFCRM*VSSNGQ
Trigger: TTGACCATTGCTAGAGACCCACATCCTACAAAATCC...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGATGGAAGGAAAGGCATaGCTTAAGGTTATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQMEGKA*LKVMVS
Trigger: TGACACCATAACCTTAAGCCATGCCTTTCCTTCCAT...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGTCTGGCCTGATTTACTaGCTGTGGCCACAGTCTAAC +
Preference number: 4 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMSGLIY*LWPQSN
Trigger: GTTAGACTGTGGCCACAGCCAGTAAATCAGGCCAGA...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGGTCGGGCTACCCACATaGGTTAGAGACAAATGCTTC +
Preference number: 4 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMVGLPT*VRDKCF
Trigger: GAAGCATTTGTCTCTAACCCATGTGGGTAGCCCGAC...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAAGGGTCACTGTTAGCGTaGTGCTGTCATGGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQGSLLA*CCHGRA
Trigger: AGCCCGACCATGACAGCACCACGCTAACAGTGACCC...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTATGCTTAGTACTGGCCTaGGGCCAACATAAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLCLVLA*GQHKEL
Trigger: CAGCTCTTTATGTTGGCCCCAGGCCAGTACTAAGCA...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGCACTCAGCATGGAAGTaGGCAGTCCATTTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SDGTKWVESSDPASPNTQHSAWK*AVHFWR
Trigger: TCTCCAAAAATGGACTGCCCACTTCCATGCTGAGTG...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAAACACTGGTTTTTCTaGCAAGATGTCAATCTGGCC +
Preference number: 4 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGKHWFF*QDVNLA
Trigger: GGCCAGATTGACATCTTGCCAGAAAAACCAGTGTTT...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CAA 72 bp CCAATGGGGTCACAGCAACTATGGGAAAGGAAAACCTaGGAGTCACAGCTGCGATCAGATCAGGGTATTCTT +
Preference number: 4 (lower is better)
Translates to: PMGSQQLWERKT*ESQLRSDQGIL
Trigger: AAGAATACCCTGATCTGATCGCAGCTGTGACTCCAAGGTTTTCCTTTCCCATAGTTGCTGTGACCCCATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCACCTCATCTAAGGGCTaGAATGTTTTTCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFTSSKG*NVFLFL
Trigger: GAGAAAGAGAAAAACATTTCAGCCCTTAGATGAGGT...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTACAGATCAATCCGTTGTaGAACTTCCCACTCACTCTG +
Preference number: 4 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLQINPL*NFPLTL
Trigger: CAGAGTGAGTGGGAAGTTTCACAACGGATTGATCTG...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCATGCAGCACATTAGGATaGCAGAGCAACAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: EPAHLLRRANLKSQGISSCSTLG*QSNRRG
Trigger: CCCTCTCCTGTTGCTCTGTCATCCTAATGTGCTGCA...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCGTAATGAGGACCAAATaGGACAGCACATGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFVMRTK*DSTCKN
Trigger: ATTTTTGCATGTGCTGTCTCATTTGGTCCTCATTAC...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTTCAGAAGGGCTAATTTaGAGTCTCAAGGAATTAGTT +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMASEGLI*SLKELV
Trigger: AACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGA...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp AGAATGGCTCAGCTTCTCCAAGGTACCTCAACAGAAAGTCAATGTGCCTGCTCAGAGTGTGCCAAAGGATaGCAGTTGCAATCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RMAQLLQGTSTESQCACSECAKG*QLQSFP
Trigger: TGGAAAGGATTGCAACTGTCATCCTTTGGCACACTC...TGAGCAGGCACATTGACTTTCTGTTGAGGTACCTTGGAGAAGCTGAGCCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCAGTTTAGATCCTCAATaGGTTGGCGGGCACCCTCGT +
Preference number: 4 (lower is better)
Translates to: ERVFWRLRSGLGKASLNISLDPQ*VGGHPR
Trigger: ACGAGGGTGCCCGCCAACGCATTGAGGATCTAAACT...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCGAAGTGAGCAGGGGCTaGCTCCAAGTCTCAGTTATG +
Preference number: 4 (lower is better)
Translates to: ERVFWRLRSGLGKASLNIEVSRG*LQVSVM
Trigger: CATAACTGAGACTTGGAGGCAGCCCCTGCTCACTTC...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTGATAAACTCTCTGTGTaGAGATGTTATCTTAGGACA +
Preference number: 4 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMADKLSV*RCYLRT
Trigger: TGTCCTAAGATAACATCTGCACACAGAGAGTTTATC...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCACAGGTTTCAGAACCTaGCCACTTGCTCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: ERVFWRLRSGLGKASLNITGFRT*PLAQKG
Trigger: GCCCTTCTGAGCAAGTGGGCAGGTTCTGAAACCTGT...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTAAGACACCTGTCCATCTaGGTTCTCAATCTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLRHLSI*VLNLEY
Trigger: GTACTCCAGATTGAGAACGCAGATGGACAGGTGTCT...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGAGACACCTGTCCATCTaGGTTCTCAATCTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMRHLSI*VLNLEY
Trigger: GTACTCCAGATTGAGAACGCAGATGGACAGGTGTCT...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGAACTGTGTCTTCCTCTaGAACTCAGTGAGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMNCVFL*NSVSPK
Trigger: CTTTGGGCTCACTGAGTTCCAGAGGAAGACACAGTT...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAATCCAAGCCATAATTTaGCTTTTCATGTGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVEIQAII*LFMCAS
Trigger: AGAGGCACACATGAAAAGCCAAATTATGGCTTGGAT...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCATCCAAGCCATAATTTaGCTTTTCATGTGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFIQAII*LFMCAS
Trigger: AGAGGCACACATGAAAAGCCAAATTATGGCTTGGAT...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAGTATTCCATGTCTCCTaGCCTAATTCCGAGTTTTTA +
Preference number: 4 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGVFHVS*PNSEFL
Trigger: TAAAAACTCGGAATTAGGCCAGGAGACATGGAATAC...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAGGAGTTGATTTGGTTTaGGATTTAATGCTCCTGACT +
Preference number: 4 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGGVDLV*DLMLLT
Trigger: AGTCAGGAGCATTAAATCCCAAACCAAATCAACTCC...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACGTTAAAACAGCTGAATaGGAATTCTATCCAATCCAT +
Preference number: 4 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHVKTAE*EFYPIH
Trigger: ATGGATTGGATAGAATTCCCATTCAGCTGTTTTAAC...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTTGCTCTGGTGACCAATaGGGTCACAGCAACTATGGG +
Preference number: 4 (lower is better)
Translates to: TNASGKLQLASCIIGRKLCSGDQ*GHSNYG
Trigger: CCCATAGTTGCTGTGACCCCATTGGTCACCAGAGCA...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTACGCATGCTCCTCAGATaGCACAAAATGGGTAGAATC +
Preference number: 4 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLRMLLR*HKMGRI
Trigger: GATTCTACCCATTTTGTGCCATCTGAGGAGCATGCG...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAAGGCCGAAAGTGCCTTaGAGAAAGAACCCTCGCATG +
Preference number: 4 (lower is better)
Translates to: EPAHLLRRANLKSQGISSRPKVP*RKNPRM
Trigger: CATGCGAGGGTTCTTTCTCCAAGGCACTTTCGGCCT...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCATTGGCTTATGTCCAGTaGAGATGGCGGAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: EPAHLLRRANLKSQGISSLAYVQ*RWRKGR
Trigger: TCTCCCCTTCCGCCATCTCCACTGGACATAAGCCAA...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCTGTGCTTCACATCAATaGAAATCTTCAGTTCTACAA +
Preference number: 4 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGCASHQ*KSSVLQ
Trigger: TTGTAGAACTGAAGATTTCCATTGATGTGAAGCACA...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGCTTCCATCACACATATaGAGAGAGGTTTTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: SDGTKWVESSDPASPNTQLPSHI*REVFQV
Trigger: CACTTGGAAAACCTCTCTTCATATGTGTGATGGAAG...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGTCAGAAGGGCTAATTTaGAGTCTCAAGGAATTAGTT +
Preference number: 4 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQSEGLI*SLKELV
Trigger: AACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGA...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCCAGTCCCCTAGTAACTaGGTTCATACATATTATTGT +
Preference number: 4 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFQSPSN*VHTYYC
Trigger: ACAATAATATGTATGAACTCAGTTACTAGGGGACTG...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp AGAATGGCTCAGCTTCTCCAAGGTACCTCAACAGAAAGTCAATGTGCCTGCTCACTTCAGGTTGTTCTTTaGACTCTGCAACAGGATGGT +
Preference number: 4 (lower is better)
Translates to: RMAQLLQGTSTESQCACSLQVVL*TLQQDG
Trigger: ACCATCCTGTTGCAGAGTGCAAAGAACAACCTGAAG...TGAGCAGGCACATTGACTTTCTGTTGAGGTACCTTGGAGAAGCTGAGCCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGTGGGTTAGAGACAAATaGTTCTGGGAAATTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SDGTKWVESSDPASPNTQWVRDK*FWEIAA
Trigger: AGCTGCAATTTCCCAGAAGCATTTGTCTCTAACCCA...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTAAGTTTTGGTCTCCCCTaGAGCACCGCCCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: YSYLLARSILGTFLPILVSFGLP*STAHLL
Trigger: CAAGAGATGGGCGGTGCTGCAGGGGAGACCAAAACT...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp AGAATGGCTCAGCTTCTCCAAGGTACCTCAACAGAAAGTCAATGTGCCTGCTCACTACAACCATTCCAATaGTCTGGTCCTGTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: RMAQLLQGTSTESQCACSLQPFQ*SGPVSR
Trigger: TCTTGAGACAGGACCAGAGCATTGGAATGGTTGTAG...TGAGCAGGCACATTGACTTTCTGTTGAGGTACCTTGGAGAAGCTGAGCCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGGTTAGCATGAGTCCTTaGCTAGAAGTTCAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMVSMSP*LEVQGL
Trigger: AAGCCCTTGAACTTCTAGGCAAGGACTCATGCTAAC...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTAAGATCCTCAATGCGTTaGCGGGCACCCTCGTTGATC +
Preference number: 4 (lower is better)
Translates to: YSYLLARSILGTFLPILVRSSMR*RAPSLI
Trigger: GATCAACGAGGGTGCCCGCCAACGCATTGAGGATCT...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGCGGATAATCTCCAGCTaGATAAAAATGAAGACAAAG +
Preference number: 4 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQRIISS*IKMKTK
Trigger: CTTTGTCTTCATTTTTATCCAGCTGGAGATTATCCG...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCCGGTGTGGCTCTCCTTaGCCTTCTAAAATGGCCTAT +
Preference number: 4 (lower is better)
Translates to: ERVFWRLRSGLGKASLNIRCGSP*PSKMAY
Trigger: ATAGGCCATTTTAGAAGGCCAAGGAGAGCCACACCG...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCCTCCAGATCTCTATCTaGTGGAGCTGCTGGACTTCC +
Preference number: 4 (lower is better)
Translates to: TYTQSCLILISNLGTGASLQISI*WSCWTS
Trigger: GGAAGTCCAGCAGCTCCACCAGATAGAGATCTGGAG...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGAGAGACAAATGCTTCTaGGAAATTGCAGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMRDKCF*EIAAGF
Trigger: GAAGCCAGCTGCAATTTCCCAGAAGCATTTGTCTCT...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp AGAATGGCTCAGCTTCTCCAAGGTACCTCAACAGAAAGTCAATGTGCCTGCTCATTGCTAGGTCTATCCTaGGGACCTTCTTGCCAATAT +
Preference number: 4 (lower is better)
Translates to: RMAQLLQGTSTESQCACSLLGLS*GPSCQY
Trigger: ATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAA...TGAGCAGGCACATTGACTTTCTGTTGAGGTACCTTGGAGAAGCTGAGCCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CAA 72 bp CACACACACACCACACACGTGCACATATACACAAAGTaGTCTCATCCTAATCTCCAATCTGGGTACTGGAGC +
Preference number: 4 (lower is better)
Translates to: HTHTTHVHIYTK*SHPNLQSGYWS
Trigger: GCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTACAGGTGCACTTCTTCTaGCCCGCTTTGCAGCTACAA +
Preference number: 4 (lower is better)
Translates to: YSYLLARSILGTFLPILVQVHFF*PALQLQ
Trigger: TTGTAGCTGCAAAGCGGGTCAGAAGAAGTGCACCTG...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR TCA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTAAAGCAGTATGTTGCTaGCAAAGTACCAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TNASGKLQLASCIIGRKLKAVCC*QSTRSL
Trigger: CAGGCTCCTGGTACTTTGTCAGCAACATACTGCTTT...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCAAAGCAGTATGTTGCTaGCAAAGTACCAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ERVFWRLRSGLGKASLNIKAVCC*QSTRSL
Trigger: CAGGCTCCTGGTACTTTGTCAGCAACATACTGCTTT...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTAGCTTTCTCTTTGATCTaGTCCTTCCAACTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLAFSLI*SFQLSF
Trigger: AAAGCTGAGTTGGAAGGATCAGATCAAAGAGAAAGC...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAATCACACAGGTTCCACTaGGTGTGCCAAAGGATGACA +
Preference number: 4 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQSHRFH*VCQRMT
Trigger: TGTCATCCTTTGGCACACTCAGTGGAACCTGTGTGA...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTAATGGCCTATATGGGATaGACTCCTACCCTACTTAAT +
Preference number: 4 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLMAYMG*TPTLLN
Trigger: ATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCAT...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp AGAATGGCTCAGCTTCTCCAAGGTACCTCAACAGAAAGTCAATGTGCCTGCTCAACTATTCTATGCTCCTaGAAAGGAGATCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: RMAQLLQGTSTESQCACSTILCS*KGDHRN
Trigger: GTTCCTGTGATCTCCTTTGCAGGAGCATAGAATAGT...TGAGCAGGCACATTGACTTTCTGTTGAGGTACCTTGGAGAAGCTGAGCCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTCCCAGCCTGAAGACATaGAGTTGCTCTGGTGACCAA +
Preference number: 4 (lower is better)
Translates to: WPIWDALLPYLISPIAKCPSLKT*SCSGDQ
Trigger: TTGGTCACCAGAGCAACTGCATGTCTTCAGGCTGGG...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAGAAAGAACCCTCGCATaGTCCTCAGATGGCACAAAA +
Preference number: 4 (lower is better)
Translates to: EPAHLLRRANLKSQGISSERTLA*SSDGTK
Trigger: TTTTGTGCCATCTGAGGAGCATGCGAGGGTTCTTTC...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCGAAAGAACCCTCGCATaGTCCTCAGATGGCACAAAA +
Preference number: 4 (lower is better)
Translates to: ERVFWRLRSGLGKASLNIERTLA*SSDGTK
Trigger: TTTTGTGCCATCTGAGGAGCATGCGAGGGTTCTTTC...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCTCCTCTGGAAATTTCTaGACCTCTGCCAGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: TYTQSCLILISNLGTGASSSGNF*TSARQV
Trigger: AACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGA...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCTCATGTGTGCCTCTGTaGGTTCCTGGTACCCAAACT +
Preference number: 4 (lower is better)
Translates to: TYTQSCLILISNLGTGASSCVPL*VPGTQT
Trigger: AGTTTGGGTACCAGGAACCCACAGAGGCACACATGA...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCACATCTTTCTTTCTGTaGTGGCAAAATTTCAAGACT +
Preference number: 4 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFTSFFL*WQNFKT
Trigger: AGTCTTGAAATTTTGCCACCACAGAAAGAAAGATGT...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGCCTGATTTACTaGCTGTGGCCACAGTCTAAC +
Preference number: 4 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQSGLIY*LWPQSN
Trigger: GTTAGACTGTGGCCACAGCCAGTAAATCAGGCCAGA...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAGCTACTTATTTTCTGTaGGCTTCACTATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGATYFL*ASLFSS
Trigger: AGATGAAAATAGTGAAGCCCACAGAAAATAAGTAGC...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTGAGCATCACTCAGCATaGAAGTGGGCAGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: TNASGKLQLASCIIGRKLEHHSA*KWAVHF
Trigger: AAAATGGACTGCCCACTTCCATGCTGAGTGATGCTC...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGGGAGTTGATTTGGTTTaGGATTTAATGCTCCTGACT +
Preference number: 4 (lower is better)
Translates to: SDGTKWVESSDPASPNTQGVDLV*DLMLLT
Trigger: AGTCAGGAGCATTAAATCCCAAACCAAATCAACTCC...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGCCCATGAGATGTGACTaGAAGCAATATGTGCAACTT +
Preference number: 4 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMPMRCD*KQYVQL
Trigger: AAGTTGCACATATTGCTTCCAGTCACATCTCATGGG...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAGAAGAGAGCAGGCATTaGCTTATGTCCAGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: EPAHLLRRANLKSQGISSEESRH*LMSSGD
Trigger: ATCTCCACTGGACATAAGCCAATGCCTGCTCTCTTC...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGTGTGCTTCACATCAATaGAAATCTTCAGTTCTACAA +
Preference number: 4 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQCASHQ*KSSVLQ
Trigger: TTGTAGAACTGAAGATTTCCATTGATGTGAAGCACA...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CAA 72 bp TTGCCTAGAAGTTCAAGGGCTTTTGTGTTGCAGATGTaGCTGGTGTTTATAGCTAGGCCAGTCCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LPRSSRAFVLQM*LVFIARPVLWK
Trigger: TTTCCAGAGGACTGGCCTAGCTATAAACACCAGCAACATCTGCAACACAAAAGCCCTTGAACTTCTAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTTCAGCAGCCACTTGTTaGACCTTTCATCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: WPIWDALLPYLISPIAKCSAATC*TFHPWS
Trigger: GGACCATGGATGAAAGGTTCAACAAGTGGCTGCTGA...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR TCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCGTGATAACCATCCCATaGATGGTATTCCATGTCTCC +
Preference number: 4 (lower is better)
Translates to: ERVFWRLRSGLGKASLNIVITIP*MVFHVS
Trigger: GGAGACATGGAATACCATTCATGGGATGGTTATCAC...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTAGATCTCTCAGCTCATTaGTGGCTCAGTGATGTGGAG +
Preference number: 4 (lower is better)
Translates to: YSYLLARSILGTFLPILVDLSAH*WLSDVE
Trigger: CTCCACATCACTGAGCCATCAATGAGCTGAGAGATC...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGGTAATGAGGACCAAATaGGACAGCACATGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMVMRTK*DSTCKN
Trigger: ATTTTTGCATGTGCTGTCTCATTTGGTCCTCATTAC...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTACTTAATAGGGAGTTGTaGGCACATTCCCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: YSYLLARSILGTFLPILVLNREL*AHSLGL
Trigger: AAGGCCGAGGGAATGTGCTCACAACTCCCTATTAAG...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAGGGGCGGGTTTATATTaGTTTCCCTTAATAGGGAGT +
Preference number: 4 (lower is better)
Translates to: EPAHLLRRANLKSQGISSGAGLY*FPLIGS
Trigger: ACTCCCTATTAAGGGAAATCAATATAAACCCGCCCC...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp AGAATGGCTCAGCTTCTCCAAGGTACCTCAACAGAAAGTCAATGTGCCTGCTCATTGTTCTTTGCACTCTaGAACAGGATGGTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: RMAQLLQGTSTESQCACSLFFAL*NRMVFL
Trigger: AAGAAACACCATCCTGTTGCAGAGTGCAAAGAACAA...TGAGCAGGCACATTGACTTTCTGTTGAGGTACCTTGGAGAAGCTGAGCCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCCTTCAGGTTGTTCTTTaGACTCTGCAACAGGATGGT +
Preference number: 4 (lower is better)
Translates to: ERVFWRLRSGLGKASLNILQVVL*TLQQDG
Trigger: ACCATCCTGTTGCAGAGTGCAAAGAACAACCTGAAG...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCGGGTTTTACACATTTTaGCTTCAGCTCCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: ERVFWRLRSGLGKASLNIGFYTF*LQLLEG
Trigger: CCCTTCAAGGAGCTGAAGGCAAAATGTGTAAAACCC...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCTCGGTCTTTTTAATTTaGTTAGTACTGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ERVFWRLRSGLGKASLNISVFLI*LVLAWG
Trigger: GCCCCAGGCCAGTACTAAGCAAATTAAAAAGACCGA...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGTACATTTCATATTCTTaGAGTTCCCAATCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: SDGTKWVESSDPASPNTQYISYS*SSQSQY
Trigger: GTACTGGGATTGGGAACTGCAAGAATATGAAATGTA...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGGATAAACTCTCTGTGTaGAGATGTTATCTTAGGACA +
Preference number: 4 (lower is better)
Translates to: SDGTKWVESSDPASPNTQDKLSV*RCYLRT
Trigger: TGTCCTAAGATAACATCTGCACACAGAGAGTTTATC...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCACTACAACCATTCCAATaGTCTGGTCCTGTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: EPAHLLRRANLKSQGISSLQPFQ*SGPVSR
Trigger: TCTTGAGACAGGACCAGAGCATTGGAATGGTTGTAG...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTACCTTGGAGTCACAGCTaGGATCAGATCAGGGTATTC +
Preference number: 4 (lower is better)
Translates to: YSYLLARSILGTFLPILVPWSHS*DQIRVF
Trigger: GAATACCCTGATCTGATCGCAGCTGTGACTCCAAGG...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTCTGAAGACATGCAGTTaGTCTGGTGACCAATGGGGT +
Preference number: 4 (lower is better)
Translates to: WPIWDALLPYLISPIAKCLKTCS*SGDQWG
Trigger: ACCCCATTGGTCACCAGAGCAACTGCATGTCTTCAG...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCAAATTTCTGCACCTCTaGCAGGCAGGTTGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: ERVFWRLRSGLGKASLNIKFLHL*QAGWFF
Trigger: AAAGAACCAACCTGCCTGGCAGAGGTGCAGAAATTT...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCTGTAATAGAAATTCCTaGTGTGGCTGTGGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: TYTQSCLILISNLGTGASCNRNS*CGCGCG
Trigger: CCCGCAACCACAGCCACACCAGGAATTTCTATTACA...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR CCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCCCAGAGAGAGTATTCTaGAGGCTGAGAAGTGGCTTA +
Preference number: 4 (lower is better)
Translates to: TYTQSCLILISNLGTGASPERVF*RLRSGL
Trigger: TAAGCCACTTCTCAGCCTCCAGAATACTCTCTCTGG...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCAGAGACAAATGCTTCTaGGAAATTGCAGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ERVFWRLRSGLGKASLNIRDKCF*EIAAGF
Trigger: GAAGCCAGCTGCAATTTCCCAGAAGCATTTGTCTCT...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCATTCAGCAGAAGGCAGTaGAAGCCTTTGATACCAATC +
Preference number: 4 (lower is better)
Translates to: EPAHLLRRANLKSQGISSFSRRQ*KPLIPI
Trigger: GATTGGTATCAAAGGCTTCCACTGCCTTCTGCTGAA...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTAATACCTGGTCTCAAGTaGAGCCGCATACATCATGCC +
Preference number: 4 (lower is better)
Translates to: YSYLLARSILGTFLPILVIPGLK*SRIHHA
Trigger: GGCATGATGTATGCGGCTCCACTTGAGACCAGGTAT...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCCACTCAGCATGGAAGTaGGCAGTCCATTTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: TYTQSCLILISNLGTGASHSAWK*AVHFWR
Trigger: TCTCCAAAAATGGACTGCCCACTTCCATGCTGAGTG...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTACTCCAATCTGGGTACTaGAGCTTCCATTGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: YSYLLARSILGTFLPILVLQSGY*SFHCQE
Trigger: CTCTTGGCAATGGAAGCTCCAGTACCCAGATTGGAG...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTTTGCTAGGTCTATCCTaGGGACCTTCTTGCCAATAT +
Preference number: 4 (lower is better)
Translates to: TNASGKLQLASCIIGRKLLLGLS*GPSCQY
Trigger: ATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAA...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGCTTGACCAGTGTCTTTaGCATTTTCCATGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: SDGTKWVESSDPASPNTQLDQCL*HFPCQK
Trigger: TTTTTGACATGGAAAATGCCAAAGACACTGGTCAAG...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCGGCAAGATGTCAATCTaGCCCTTTGATGAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: TYTQSCLILISNLGTGASGKMSI*PFDEFP
Trigger: TGGGAACTCATCAAAGGGCCAGATTGACATCTTGCC...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CAA 72 bp GTTTCAGAACCTGCCCACTTGCTCAGAAGGGCTAATTaGAAGTCTCAAGGAATTAGTTCAGATTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VSEPAHLLRRAN*KSQGISSDLSR
Trigger: CCTGGACAAATCTGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTCTGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTACCCCCATCTCTAAATaGTCCCACTATACAGGACCT +
Preference number: 4 (lower is better)
Translates to: WPIWDALLPYLISPIAKCTPISK*SHYTGP
Trigger: AGGTCCTGTATAGTGGGATCATTTAGAGATGGGGGT...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAATGGCCTATATGGGATaGACTCCTACCCTACTTAAT +
Preference number: 4 (lower is better)
Translates to: EPAHLLRRANLKSQGISSMAYMG*TPTLLN
Trigger: ATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCAT...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAACCCAAACTATTCTATaGTCCTGCAAAGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: EPAHLLRRANLKSQGISSTQTIL*SCKGDH
Trigger: GTGATCTCCTTTGCAGGAGCATAGAATAGTTTGGGT...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTATGCTTCTGGGAAATTaGAGCTGGCTTCTTGCATTA +
Preference number: 4 (lower is better)
Translates to: TNASGKLQLASCIIGRKLMLLGN*SWLLAL
Trigger: TAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCAT...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGTACATTTCATATTCTTaGAGTTCCCAATCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMYISYS*SSQSQY
Trigger: GTACTGGGATTGGGAACTGCAAGAATATGAAATGTA...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTCAGATGTCCTCAGAATaGCTCAGCTTCTCCAAGGTA +
Preference number: 4 (lower is better)
Translates to: WPIWDALLPYLISPIAKCQMSSE*LSFSKV
Trigger: TACCTTGGAGAAGCTGAGCCATTCTGAGGACATCTG...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTGCCTCTGTGGGTTCCTaGTACCCAAACTATTCTATG +
Preference number: 4 (lower is better)
Translates to: WPIWDALLPYLISPIAKCASVGS*YPNYSM
Trigger: CATAGAATAGTTTGGGTACCAGGAACCCACAGAGGC...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCCCGTTCCCTAAAAGATaGAAGGAAAGGCATGGCTTA +
Preference number: 4 (lower is better)
Translates to: TYTQSCLILISNLGTGASPFPKR*KERHGL
Trigger: TAAGCCATGCCTTTCCTTCCATCTTTTAGGGAACGG...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTCAGTTTGAGACACTCTaGCCTGATTTACTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: WPIWDALLPYLISPIAKCQFETL*PDLLAV
Trigger: CACAGCCAGTAAATCAGGCCAGAGTGTCTCAAACTG...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGGCTACTTATTTTCTGTaGGCTTCACTATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: SDGTKWVESSDPASPNTQATYFL*ASLFSS
Trigger: AGATGAAAATAGTGAAGCCCACAGAAAATAAGTAGC...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTATGAAGTCAAAAGGCTaGGGCTCTAAGCAACTTTCT +
Preference number: 4 (lower is better)
Translates to: TNASGKLQLASCIIGRKLMKSKG*GSKQLS
Trigger: AGAAAGTTGCTTAGAGCCCCAGCCTTTTGACTTCAT...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGCGTTCTCAATCTaGAGTACTGCTAGGTTAGCA +
Preference number: 4 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQSAFSI*STARLA
Trigger: TGCTAACCTAGCAGTACTCCAGATTGAGAACGCAGA...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTGGCAAGATGTCAATCTaGCCCTTTGATGAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: WPIWDALLPYLISPIAKCGKMSI*PFDEFP
Trigger: TGGGAACTCATCAAAGGGCCAGATTGACATCTTGCC...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CAA 72 bp GGTTTTACACATTTTGCCTTCAGCTCCTTGAAGGGATaGATCAGATCAATCCGTTGTGAAACTTCCCACTCA +
Preference number: 4 (lower is better)
Translates to: GFTHFAFSSLKG*IRSIRCETSHS
Trigger: TGAGTGGGAAGTTTCACAACGGATTGATCTGATCAATCCCTTCAAGGAGCTGAAGGCAAAATGTGTAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAACCTCATCTAAGGGCTaGAATGTTTTTCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: EPAHLLRRANLKSQGISSTSSKG*NVFLFL
Trigger: GAGAAAGAGAAAAACATTTCAGCCCTTAGATGAGGT...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCTGCCTAAAAAGTCATTaGTCTCTCAGCTCATTGATG +
Preference number: 4 (lower is better)
Translates to: ERVFWRLRSGLGKASLNICLKSH*SLSSLM
Trigger: CATCAATGAGCTGAGAGATCAATGACTTTTTAGGCA...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAACTAGGTTTTAACCCATaGGATGTGACTGGAAGCAAT +
Preference number: 4 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQLGFNP*DVTGSN
Trigger: ATTGCTTCCAGTCACATCTCATGGGTTAAAACCTAG...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCATTGTTCTTTGCACTCTaGAACAGGATGGTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: EPAHLLRRANLKSQGISSLFFAL*NRMVFL
Trigger: AAGAAACACCATCCTGTTGCAGAGTGCAAAGAACAA...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTCTGGAAGAGATCTTTTaGATACTCGTAAAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: TNASGKLQLASCIIGRKLLEEIF*ILVKLH
Trigger: ATGCAGCTTTACGAGTATGCAAAAGATCTCTTCCAG...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTATCGGTCTTTTTAATTTaGTTAGTACTGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: YSYLLARSILGTFLPILVSVFLI*LVLAWG
Trigger: GCCCCAGGCCAGTACTAAGCAAATTAAAAAGACCGA...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTACTAAAATGGCCTATATaGGATGCACTCCTACCCTAC +
Preference number: 4 (lower is better)
Translates to: YSYLLARSILGTFLPILVLKWPI*DALLPY
Trigger: GTAGGGTAGGAGTGCATCCCATATAGGCCATTTTAG...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCGGATTTTGTAGGATGTaGGTCTCTAGCAATGGTCAA +
Preference number: 4 (lower is better)
Translates to: TYTQSCLILISNLGTGASGFCRM*VSSNGQ
Trigger: TTGACCATTGCTAGAGACCCACATCCTACAAAATCC...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCACATGGCTTAAGGTTATaGTGTCAGGATTTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: EPAHLLRRANLKSQGISSHGLRL*CQDFVG
Trigger: TCCTACAAAATCCTGACACCATAACCTTAAGCCATG...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCATGGAAGGAAAGGCATaGCTTAAGGTTATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: TYTQSCLILISNLGTGASMEGKA*LKVMVS
Trigger: TGACACCATAACCTTAAGCCATGCCTTTCCTTCCAT...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTATTACCTTTCCACCTTaGAAAGATCTGCCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: TNASGKLQLASCIIGRKLITFPP*KDLPPL
Trigger: TAAAGGAGGCAGATCTTTCCAAGGTGGAAAGGTAAT...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTATTAACCCATGAGATGTaGCTGGAAGCAATATGTGCA +
Preference number: 4 (lower is better)
Translates to: YSYLLARSILGTFLPILVLTHEM*LEAICA
Trigger: TGCACATATTGCTTCCAGTCACATCTCATGGGTTAA...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTACCTCGGCCTTCATATTaGATAGGTTTTGAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: YSYLLARSILGTFLPILVPRPSY*IGFELD
Trigger: ATCCAACTCAAAACCTATTCAATATGAAGGCCGAGG...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCTCCAAGTCTCAGTTATaGATGAATTCCTTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: ERVFWRLRSGLGKASLNISKSQL*MNSLPK
Trigger: TTTTGGCAAGGAATTCATGCATAACTGAGACTTGGA...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCCATGGCTTAAGGTTATaGTGTCAGGATTTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: TYTQSCLILISNLGTGASHGLRL*CQDFVG
Trigger: TCCTACAAAATCCTGACACCATAACCTTAAGCCATG...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR TCA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTTGCCTAAAAAGTCATTaGTCTCTCAGCTCATTGATG +
Preference number: 4 (lower is better)
Translates to: WPIWDALLPYLISPIAKCCLKSH*SLSSLM
Trigger: CATCAATGAGCTGAGAGATCAATGACTTTTTAGGCA...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR GCA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTCTGGAAGAGATCTTTTaGATACTCGTAAAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: WPIWDALLPYLISPIAKCLEEIF*ILVKLH
Trigger: ATGCAGCTTTACGAGTATGCAAAAGATCTCTTCCAG...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAACGGATAATCTCCAGCTaGATAAAAATGAAGACAAAG +
Preference number: 4 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQRIISS*IKMKTK
Trigger: CTTTGTCTTCATTTTTATCCAGCTGGAGATTATCCG...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAGTTAAAACAGCTGAATaGGAATTCTATCCAATCCAT +
Preference number: 4 (lower is better)
Translates to: EPAHLLRRANLKSQGISSVKTAE*EFYPIH
Trigger: ATGGATTGGATAGAATTCCCATTCAGCTGTTTTAAC...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTATTACCTTTCCACCTTaGAAAGATCTGCCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: WPIWDALLPYLISPIAKCITFPP*KDLPPL
Trigger: TAAAGGAGGCAGATCTTTCCAAGGTGGAAAGGTAAT...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CAA 72 bp TCTTGGGCTTTTGACACTGATATATCTGGAGTTGATTaGGTTTGGGATTTAATGCTCCTGACTTCCATGGAT +
Preference number: 4 (lower is better)
Translates to: SWAFDTDISGVD*VWDLMLLTSMD
Trigger: ATCCATGGAAGTCAGGAGCATTAAATCCCAAACCAAATCAACTCCAGATATATCAGTGTCAAAAGCCCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAAACATCTTTCTTTCTGTaGTGGCAAAATTTCAAGACT +
Preference number: 4 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQTSFFL*WQNFKT
Trigger: AGTCTTGAAATTTTGCCACCACAGAAAGAAAGATGT...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CCA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTACTTGACCAGTGTCTTTaGCATTTTCCATGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: YSYLLARSILGTFLPILVLDQCL*HFPCQK
Trigger: TTTTTGACATGGAAAATGCCAAAGACACTGGTCAAG...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CAA 72 bp TCTGGTAACATCACACACCAGAGCTGTAAAACCAGTTaGCCTTTAAGTAAGAGAGAAATAGCTTCCATGTTA +
Preference number: 4 (lower is better)
Translates to: SGNITHQSCKTS*PLSKREIASML
Trigger: TAACATGGAAGCTATTTCTCTCTTACTTAAAGGCAAACTGGTTTTACAGCTCTGGTGTGTGATGTTACCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
3UTR CAA 72 bp TTCATCTATGAAATGGAGACTAACAATACCCATTTGTaGTGCAGAATATATTTAAGGTATGAAAAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: FIYEMETNNTHL*CRIYLRYEKGL
Trigger: GAGGCCCTTTTCATACCTTAAATATATTCTGCACAACAAATGGGTATTGTTAGTCTCCATTTCATAGATGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS GCA 90 bp CCGGCGCGGCTCTCTCAGGCGACGCGCGGCATCCCGCCGGCGGCTTaGAGGCGCTCAGGCGCTGGGGAGCGGGGTTCGGGTCCTGGACCT +
Preference number: 5 (lower is better)
Translates to: PARLSQATRGIPPAA*RRSGAGERGSGPGP
Trigger: AGGTCCAGGACCCGAACCCCGCTCCCCAGCGCCTGAGCGCCTGCAAGCCGCCGGCGGGATGCCGCGCGTCGCCTGAGAGAGCCGCGCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS GCA 90 bp CGGGCGAGGCGCCTCTGCGGAGACGCCTCTCCCGGCGAGTCGCACTaGCGCTCCGGGCTGTCCGCCCAGGCGCAGGCACGCAGACACACT +
Preference number: 5 (lower is better)
Translates to: RARRLCGDASPGESH*RSGLSAQAQARRHT
Trigger: AGTGTGTCTGCGTGCCTGCGCCTGGGCGGACAGCCCGGAGCGGCAGTGCGACTCGCCGGGAGAGGCGTCTCCGCAGAGGCGCCTCGCCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR CAA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCGCGCTCGCCGCAAGTTaGCAGAGCGGCCCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCALAAS*QSGPRS
Trigger: GCTGCGGGGGCCGCTCTGCAAACTTGCGGCGAGCGC...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR CAA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGGCAGCCCCATCTTCTTaGGGCCACTGGTGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLAAAPSS*GHWWSL
Trigger: CAGGGACCACCAGTGGCCCAAAGAAGATGGGGCTGC...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCGCAGCCCCATCTTCTTaGGGCCACTGGTGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGAAPSS*GHWWSL
Trigger: CAGGGACCACCAGTGGCCCAAAGAAGATGGGGCTGC...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCATGGCCGGCACGCAGTaGGTGAGCTCCGTCCAGTCG +
Preference number: 5 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFMAGTQ*VSSVQS
Trigger: CGACTGGACGGAGCTCACCAACTGCGTGCCGGCCAT...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR CAA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCAAGGCCGAAAGTGCCTaGGAGAAAGAACCCTCGCAT +
Preference number: 5 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCKAESA*EKEPSH
Trigger: ATGCGAGGGTTCTTTCTCCAAGGCACTTTCGGCCTT...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCCATCCCGCCGGCGGCTaGCAGGCGCTCAGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: ERVFWRLRSGLGKASLNIHPAGG*QALRRW
Trigger: CCAGCGCCTGAGCGCCTGCAAGCCGCCGGCGGGATG...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR CAA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCTGGGAAAGGAAAACCTaGGAGTCACAGCTGCGATCA +
Preference number: 5 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCWERKT*ESQLRS
Trigger: TGATCGCAGCTGTGACTCCAAGGTTTTCCTTTCCCA...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGAAGGCCGAAAGTGCCTaGGAGAAAGAACCCTCGCAT +
Preference number: 5 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLAKAESA*EKEPSH
Trigger: ATGCGAGGGTTCTTTCTCCAAGGCACTTTCGGCCTT...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAATGGCGGGCACCCTCGTaGATCTCCACGTTAGAAGCC +
Preference number: 5 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVEWRAPS*ISTLEA
Trigger: GGCTTCTAACGTGGAGATCAACGAGGGTGCCCGCCA...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCGTCGGTCTTTTTAATTaGCTTAGTACTGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCVGLFN*LSTGLG
Trigger: CCCCAGGCCAGTACTAAGCAAATTAAAAAGACCGAC...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGGGCTGCTCCCCGAAGTaGGTGCAGGAGCTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMGCSPK*VQELVQ
Trigger: CTGCACCAGCTCCTGCACCAACTTCGGGGAGCAGCC...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR CAA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGAGCCACGTCTCCTTCTaGCCAGGCCGGTGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMSHVSF*PGRWQV
Trigger: CACCTGCCACCGGCCTGGCAAGAAGGAGACGTGGCT...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR CAA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAGAAGCCCGCGTGATGTaGAACTGTGTGAAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVEEARVM*NCVKGE
Trigger: CTCCCCCTTCACACAGTTCAACATCACGCGGGCTTC...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCTCTATTCTTATCTCCTaGCTAGGTCTATCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCSILIS*LGLSWG
Trigger: TCCCCAGGATAGACCTAGCAAGGAGATAAGAATAGA...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGCAGATCAGGGTATTCTaGTGTAAGTCCAACCCAGCT +
Preference number: 5 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLAQIRVF*CKSNPA
Trigger: AGCTGGGTTGGACTTACACAAGAATACCCTGATCTG...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTGGTGCAATGCAGCACATTTCTaGTCCAGTTTGAGACACTCT +
Preference number: 5 (lower is better)
Translates to: GGWTDPRQYGSGSLLAWCNAAHF*SSLRHS
Trigger: AGAGTGTCTCAAACTGGACAAGAAATGTGCTGCATT...GCACCACGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGAGGCAGTGGAAGCCTTaGATACCAATCCCGAGGTGC +
Preference number: 5 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQRQWKP*IPIPRC
Trigger: GCACCTCGGGATTGGTATCAAAGGCTTCCACTGCCT...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp AGGGAGCCACCCGATAATGCCTTCCCTTGCACCCCAGATGAAGCCAAGCACAGTAGAAGAGAGCAGGCATaGGCTTATGTCCAGTGGAGA +
Preference number: 5 (lower is better)
Translates to: REPPDNAFPCTPDEAKHSRREQA*AYVQWR
Trigger: TCTCCACTGGACATAAGCCAATGCCTGCTCTCTTCT...ACTGTGCTTGGCTTCATCTGGGGTGCAAGGGAAGGCATTATCGGGTGGCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTGTCAGCAGCCACTTGTaGAACCTTTCATCCATGGTC +
Preference number: 5 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMAVSSHL*NLSSMV
Trigger: GACCATGGATGAAAGGTTCAACAAGTGGCTGCTGAC...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR CAA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAGGCGTCAGCAGCCACTaGTTGAACCTTTCATCCATG +
Preference number: 5 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGGVSSH*LNLSSM
Trigger: CATGGATGAAAGGTTCAACAAGTGGCTGCTGACGCC...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR CAA 90 bp AGGGAGCCACCCGATAATGCCTTCCCTTGCACCCCAGATGAAGCCAAGCACAGTTCTTCAGGTTGTTCTTaGCACTCTGCAACAGGATGG +
Preference number: 5 (lower is better)
Translates to: REPPDNAFPCTPDEAKHSSSGCS*HSATGW
Trigger: CCATCCTGTTGCAGAGTGCAAAGAACAACCTGAAGA...ACTGTGCTTGGCTTCATCTGGGGTGCAAGGGAAGGCATTATCGGGTGGCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGAATGCAGCACATTTCTaGTCCAGTTTGAGACACTCT +
Preference number: 5 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLANAAHF*SSLRHS
Trigger: AGAGTGTCTCAAACTGGACAAGAAATGTGCTGCATT...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp AGGGAGCCACCCGATAATGCCTTCCCTTGCACCCCAGATGAAGCCAAGCACAGTGTACTGGAGCTTCCATaGCCAAGAGAAGGGAAAGAA +
Preference number: 5 (lower is better)
Translates to: REPPDNAFPCTPDEAKHSVLELP*PREGKE
Trigger: TTCTTTCCCTTCTCTTGGCAATGGAAGCTCCAGTAC...ACTGTGCTTGGCTTCATCTGGGGTGCAAGGGAAGGCATTATCGGGTGGCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGAATGAAAGCAGTATGTaGCTGACAAAGTACCAGGAG +
Preference number: 5 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLANESSM*LTKYQE
Trigger: CTCCTGGTACTTTGTCAGCAACATACTGCTTTCATT...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp AGGGAGCCACCCGATAATGCCTTCCCTTGCACCCCAGATGAAGCCAAGCACAGTCTTTCCACAGACATCTaGGAACACAGGCTCAAGAGA +
Preference number: 5 (lower is better)
Translates to: REPPDNAFPCTPDEAKHSLSTDI*EHRLKR
Trigger: TCTCTTGAGCCTGTGTTCCAAGATGTCTGTGGAAAG...ACTGTGCTTGGCTTCATCTGGGGTGCAAGGGAAGGCATTATCGGGTGGCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGTCCTTCAGGCTGAAGTaGAAGCGCGGCACGAATCGG +
Preference number: 5 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMSFRLK*KRGTNR
Trigger: CCGATTCGTGCCGCGCTTCAACTTCAGCCTGAAGGA...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR CAA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGATCACGTCGCGCCCTTaGATGTTGAAATCCACGAAG +
Preference number: 5 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQITSRP*MLKSTK
Trigger: CTTCGTGGATTTCAACATCAAAGGGCGCGACGTGAT...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR CAA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCAAGGGGGAGATGAACTaGAGGTTGAATGTTCTCTCA +
Preference number: 5 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGKGEMN*RLNVLS
Trigger: TGAGAGAACATTCAACCTCAAGTTCATCTCCCCCTT...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGGAAGCCCGCGTGATGTaGAACTGTGTGAAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMEARVM*NCVKGE
Trigger: CTCCCCCTTCACACAGTTCAACATCACGCGGGCTTC...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCCATCCAAGCCATAATTaGGCTTTTCATGTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGHPSHN*AFHVCL
Trigger: GAGGCACACATGAAAAGCCAAATTATGGCTTGGATG...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACAATGCTTCTGGGAAATaGCAGCTGGCTTCTTGCATT +
Preference number: 5 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHNASGK*QLASCI
Trigger: AATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATT...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGCTGCCTAAAAAGTCATaGATCTCTCAGCTCATTGAT +
Preference number: 5 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLALPKKS*ISQLID
Trigger: ATCAATGAGCTGAGAGATCAATGACTTTTTAGGCAG...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCAGAAGAGAGCAGGCATaGGCTTATGTCCAGTGGAGA +
Preference number: 5 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFRREQA*AYVQWR
Trigger: TCTCCACTGGACATAAGCCAATGCCTGCTCTCTTCT...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTGAAGTTCAAGGGCTTTaGTGTTGCAGATGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMAEVQGL*CCRCCW
Trigger: CCAGCAACATCTGCAACACAAAAGCCCTTGAACTTC...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAATCTTCAGGTTGTTCTTaGCACTCTGCAACAGGATGG +
Preference number: 5 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVESSGCS*HSATGW
Trigger: CCATCCTGTTGCAGAGTGCAAAGAACAACCTGAAGA...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGGCCATGTTCTTCAGGTaGTTCTTTGCACTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQAMFFR*FFALCN
Trigger: GTTGCAGAGTGCAAAGAACAACCTGAAGAACATGGC...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTTCTATTCTTATCTCCTaGCTAGGTCTATCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMASILIS*LGLSWG
Trigger: TCCCCAGGATAGACCTAGCAAGGAGATAAGAATAGA...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGAGCTGTAAAACCAGTTaGCCTTTAAGTAAGAGAGAA +
Preference number: 5 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLASCKTS*PLSKRE
Trigger: TTCTCTCTTACTTAAAGGCAAACTGGTTTTACAGCT...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TGTGGAGGGGGCTGGACTGACCCAAGGCAGTATGGCTCTGGGTCACTGTTAGCGTTACATTTCATATTCTaGCAGTTCCCAATCCCAGTA +
Preference number: 5 (lower is better)
Translates to: CGGGWTDPRQYGSGSLLALHFIF*QFPIPV
Trigger: TACTGGGATTGGGAACTGCAAGAATATGAAATGTAA...CGCTAACAGTGACCCAGAGCCATACTGCCTTGGGTCAGTCCAGCCCCCTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCAGCACCGCCCATCTCTaGGATATTTCATTCCTAATA +
Preference number: 5 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGSTAHL*DISFLI
Trigger: TATTAGGAATGAAATATCCAAGAGATGGGCGGTGCT...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGACTTTCCACAGACATCTaGGAACACAGGCTCAAGAGA +
Preference number: 5 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGLSTDI*EHRLKR
Trigger: TCTCTTGAGCCTGTGTTCCAAGATGTCTGTGGAAAG...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAAGGGGGAGATGAACTaGAGGTTGAATGTTCTCTCA +
Preference number: 5 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGKGEMN*RLNVLS
Trigger: TGAGAGAACATTCAACCTCAAGTTCATCTCCCCCTT...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCCATTTCTTGTCCAGTTaGAGACACTCTGGCCTGATT +
Preference number: 5 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFHFLSS*RHSGLI
Trigger: AATCAGGCCAGAGTGTCTCAAACTGGACAAGAAATG...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGAGCTCCTTGAAGGGATaGATCAGATCAATCCGTTGT +
Preference number: 5 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQSSLKG*IRSIRC
Trigger: ACAACGGATTGATCTGATCAATCCCTTCAAGGAGCT...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCGTGGGCAGTCCATTTTaGGAGAATAAACTGTATCCC +
Preference number: 5 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFVGSPF*ENKLYP
Trigger: GGGATACAGTTTATTCTCCAAAAATGGACTGCCCAC...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GCCTTTGATACCAATCCCGAGGTGCCTAAGGAACAGCGTGAAGTGAGCAGGGGCTCTTTTCTTGGGCTTTaGACACTGATATATCTGGAG +
Preference number: 5 (lower is better)
Translates to: AFDTNPEVPKEQREVSRGSFLGL*TLIYLE
Trigger: CTCCAGATATATCAGTGTCAAAAGCCCAAGAAAAGA...GCCCCTGCTCACTTCACGCTGTTCCTTAGGCACCTCGGGATTGGTATCAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCAGCTGTGGCAGCCATCTaGGTCCATGAGGTGGATGCA +
Preference number: 5 (lower is better)
Translates to: EPAHLLRRANLKSQGISSAVAAI*VHEVDA
Trigger: TGCATCCACCTCATGGACCAAGATGGCTGCCACAGC...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCGAGCTGAGAGTAAACTaGACCAGTGTCTTTGGCATT +
Preference number: 5 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFELRVN*TSVFGI
Trigger: AATGCCAAAGACACTGGTCAAGTTTACTCTCAGCTC...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTAGCACCGCCCATCTCTaGGATATTTCATTCCTAATA +
Preference number: 5 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMASTAHL*DISFLI
Trigger: TATTAGGAATGAAATATCCAAGAGATGGGCGGTGCT...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGTGGGAAAGGAAAACCTaGGAGTCACAGCTGCGATCA +
Preference number: 5 (lower is better)
Translates to: SDGTKWVESSDPASPNTQWERKT*ESQLRS
Trigger: TGATCGCAGCTGTGACTCCAAGGTTTTCCTTTCCCA...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTTCGCGCCCTTTGATGTaGAAATCCACGAAGCGGGTC +
Preference number: 5 (lower is better)
Translates to: TNASGKLQLASCIIGRKLSRPLM*KSTKRV
Trigger: GACCCGCTTCGTGGATTTCAACATCAAAGGGCGCGA...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR CAA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTACTGGTGTGGCTGTGGTaGCGGGGACAGTCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: YSYLLARSILGTFLPILVLVWLW*RGQSFF
Trigger: GAAGAAGGACTGTCCCCGCAACCACAGCCACACCAG...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS-3UTR CAA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTATGGCGGGCACCCTCGTaGATCTCCACGTTAGAAGCC +
Preference number: 5 (lower is better)
Translates to: YSYLLARSILGTFLPILVWRAPS*ISTLEA
Trigger: GGCTTCTAACGTGGAGATCAACGAGGGTGCCCGCCA...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTACAAGCAACATTTACTaGGCCCCTTTTAACTTACTC +
Preference number: 5 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMATSNIY*APFNLL
Trigger: GAGTAAGTTAAAAGGGGCCAAGTAAATGTTGCTTGT...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp AATGCTCCTGACTTCCATGGATCCTTAGGCCCAGACGCCTTCTGCGGGCATCACATATCTGGAGTTGATTaGGTTTGGGATTTAATGCTC +
Preference number: 5 (lower is better)
Translates to: NAPDFHGSLGPDAFCGHHISGVD*VWDLML
Trigger: GAGCATTAAATCCCAAACCAAATCAACTCCAGATAT...GTGATGCCCGCAGAAGGCGTCTGGGCCTAAGGATCCATGGAAGTCAGGAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGGTACTGGAGCTTCCATaGCCAAGAGAAGGGAAAGAA +
Preference number: 5 (lower is better)
Translates to: SDGTKWVESSDPASPNTQVLELP*PREGKE
Trigger: TTCTTTCCCTTCTCTTGGCAATGGAAGCTCCAGTAC...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp AGGGAGCCACCCGATAATGCCTTCCCTTGCACCCCAGATGAAGCCAAGCACAGTCACATATACACAAAGTaGTCTCATCCTAATCTCCAA +
Preference number: 5 (lower is better)
Translates to: REPPDNAFPCTPDEAKHSHIYTK*SHPNLQ
Trigger: TTGGAGATTAGGATGAGACAACTTTGTGTATATGTG...ACTGTGCTTGGCTTCATCTGGGGTGCAAGGGAAGGCATTATCGGGTGGCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAATCCTGGGGACCTTCTaGCCAATATTAGTACTATCT +
Preference number: 5 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVEILGTF*PILVLS
Trigger: AGATAGTACTAATATTGGCAAGAAGGTCCCCAGGAT...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCTTTGTGTTGCAGATGTaGCTGGTGTTTATAGCTAGG +
Preference number: 5 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFFVLQM*LVFIAR
Trigger: CCTAGCTATAAACACCAGCAACATCTGCAACACAAA...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGGCTGGAAGAGATCTTTaGCATACTCGTAAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: SDGTKWVESSDPASPNTQAGRDL*HTRKAA
Trigger: TGCAGCTTTACGAGTATGCAAAAGATCTCTTCCAGC...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp CCCTGTCCTGGATCCACTCCCCGTTCCCTAAAAGATGGAAGGAAAGGCATGGCTCTAAGTTCCTATTCTTaGGGCCAAGCTTTTAAAAAC +
Preference number: 5 (lower is better)
Translates to: PCPGSTPRSLKDGRKGMALSSYS*GQAFKN
Trigger: GTTTTTAAAAGCTTGGCCCAAAGAATAGGAACTTAG...AGCCATGCCTTTCCTTCCATCTTTTAGGGAACGGGGAGTGGATCCAGGACAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TCAGATGGCACAAAATGGGTAGAATCATCAGACCCAGCCAGCCCTAATACCCAGAGGCAGAAGGATAATTaGCAGTCCTGCTATTCTAGG +
Preference number: 5 (lower is better)
Translates to: SDGTKWVESSDPASPNTQRQKDN*QSCYSR
Trigger: CCTAGAATAGCAGGACTGCAAATTATCCTTCTGCCT...CTGGGTATTAGGGCTGGCTGGGTCTGATGATTCTACCCATTTTGTGCCATCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAAAGGCAGTGGAAGCCTTaGATACCAATCCCGAGGTGC +
Preference number: 5 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQRQWKP*IPIPRC
Trigger: GCACCTCGGGATTGGTATCAAAGGCTTCCACTGCCT...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTAGCTGTGGCAGCCATCTaGGTCCATGAGGTGGATGCA +
Preference number: 5 (lower is better)
Translates to: YSYLLARSILGTFLPILVAVAAI*VHEVDA
Trigger: TGCATCCACCTCATGGACCAAGATGGCTGCCACAGC...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGCAGATCAGGGTATTCTaGTGTAAGTCCAACCCAGCT +
Preference number: 5 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMQIRVF*CKSNPA
Trigger: AGCTGGGTTGGACTTACACAAGAATACCCTGATCTG...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGACTCAGAAGGGCTAATTaGAAGTCTCAAGGAATTAGT +
Preference number: 5 (lower is better)
Translates to: YLVSSGAAYIMPSAEGSGLRRAN*KSQGIS
Trigger: ACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAG...TCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGCTCAGAAGGGCTAATTaGAAGTCTCAAGGAATTAGT +
Preference number: 5 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQLRRAN*KSQGIS
Trigger: ACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAG...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTAAATGCTTCTGGGAAATaGCAGCTGGCTTCTTGCATT +
Preference number: 5 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLNASGK*QLASCI
Trigger: AATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATT...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ATAGCTAGGCCAGTCCTCTGGAAATTTCTGCACCTCTGCCAGGCAGGTTGGTTCCACATATACACAAAGTaGTCTCATCCTAATCTCCAA +
Preference number: 5 (lower is better)
Translates to: IARPVLWKFLHLCQAGWFHIYTK*SHPNLQ
Trigger: TTGGAGATTAGGATGAGACAACTTTGTGTATATGTG...GAACCAACCTGCCTGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAAGCACTTAAATATCGTTaGGTTCCCTTTTGTATCAGA +
Preference number: 5 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVEALKYR*VPFCIR
Trigger: TCTGATACAAAAGGGAACCAAACGATATTTAAGTGC...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ACCTGGTCTCAAGTGGAGCCGCATACATCATGCCTTCAGCAGAAGGCAGTGGAATTACATTTCATATTCTaGCAGTTCCCAATCCCAGTA +
Preference number: 5 (lower is better)
Translates to: TWSQVEPHTSCLQQKAVELHFIF*QFPIPV
Trigger: TACTGGGATTGGGAACTGCAAGAATATGAAATGTAA...TTCCACTGCCTTCTGCTGAAGGCATGATGTATGCGGCTCCACTTGAGACCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCTCAGAACCTGCCCACTaGCTCAGAAGGGCTAATTTG +
Preference number: 5 (lower is better)
Translates to: ERVFWRLRSGLGKASLNISEPAH*LRRANL
Trigger: CAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTCTGA...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp AGAATGGCTCAGCTTCTCCAAGGTACCTCAACAGAAAGTCAATGTGCCTGCTCATGTCAATCTGGCCCTTaGATGAGTTCCCATAATGCA +
Preference number: 5 (lower is better)
Translates to: RMAQLLQGTSTESQCACSCQSGP*MSSHNA
Trigger: TGCATTATGGGAACTCATCAAAGGGCCAGATTGACA...TGAGCAGGCACATTGACTTTCTGTTGAGGTACCTTGGAGAAGCTGAGCCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GGATTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGGGGCAGGCAGAAGTACACAAAACTTTaGCTCCTCAAAACACTGGTT +
Preference number: 5 (lower is better)
Translates to: GLFVCVCVCVCVCHRGRQKYTKL*LLKTLV
Trigger: AACCAGTGTTTTGAGGAGCAAAAGTTTTGTGTACTT...CTGCCTGCCCCTGTGACACACACACACACACACACACACACACACAAACAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GATCACAGGAACTGTCTCCTTTTTCGGTGTGGCTCTCCTTGGCCTTCTAAAATGATCCTGGGGACCTTCTaGCCAATATTAGTACTATCT +
Preference number: 5 (lower is better)
Translates to: DHRNCLLFRCGSPWPSKMILGTF*PILVLS
Trigger: AGATAGTACTAATATTGGCAAGAAGGTCCCCAGGAT...CATTTTAGAAGGCCAAGGAGAGCCACACCGAAAAAGGAGACAGTTCCTGTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTATTTGTGTTGCAGATGTaGCTGGTGTTTATAGCTAGG +
Preference number: 5 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLFVLQM*LVFIAR
Trigger: CCTAGCTATAAACACCAGCAACATCTGCAACACAAA...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTGCTGGAAGAGATCTTTaGCATACTCGTAAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: TNASGKLQLASCIIGRKLAGRDL*HTRKAA
Trigger: TGCAGCTTTACGAGTATGCAAAAGATCTCTTCCAGC...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCAGGCAGAAGGATAATTaGCAGTCCTGCTATTCTAGG +
Preference number: 5 (lower is better)
Translates to: ERVFWRLRSGLGKASLNIRQKDN*QSCYSR
Trigger: CCTAGAATAGCAGGACTGCAAATTATCCTTCTGCCT...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTATCGTTTGGTTCCCTTTaGTATCAGATACTGATAGTC +
Preference number: 5 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLSFGSL*YQILIV
Trigger: GACTATCAGTATCTGATACAAAAGGGAACCAAACGA...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTGAGCTGAGAGTAAACTaGACCAGTGTCTTTGGCATT +
Preference number: 5 (lower is better)
Translates to: TNASGKLQLASCIIGRKLELRVN*TSVFGI
Trigger: AATGCCAAAGACACTGGTCAAGTTTACTCTCAGCTC...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTATCAGAACCTGCCCACTaGCTCAGAAGGGCTAATTTG +
Preference number: 5 (lower is better)
Translates to: YSYLLARSILGTFLPILVSEPAH*LRRANL
Trigger: CAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTCTGA...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAACATCCAAGCCATAATTaGGCTTTTCATGTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQHPSHN*AFHVCL
Trigger: GAGGCACACATGAAAAGCCAAATTATGGCTTGGATG...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAACATTTCTTGTCCAGTTaGAGACACTCTGGCCTGATT +
Preference number: 5 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQHFLSS*RHSGLI
Trigger: AATCAGGCCAGAGTGTCTCAAACTGGACAAGAAATG...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ACACACACCACACACGTGCACATATACACAAAGTTGTCTCATCCTAATCTCCAAAGCTCCTTGAAGGGATaGATCAGATCAATCCGTTGT +
Preference number: 5 (lower is better)
Translates to: THTTHVHIYTKLSHPNLQSSLKG*IRSIRC
Trigger: ACAACGGATTGATCTGATCAATCCCTTCAAGGAGCT...TTGGAGATTAGGATGAGACAACTTTGTGTATATGTGCACGTGTGTGGTGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTAGTCGGTCTTTTTAATTaGCTTAGTACTGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: YSYLLARSILGTFLPILVVGLFN*LSTGLG
Trigger: CCCCAGGCCAGTACTAAGCAAATTAAAAAGACCGAC...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp CCCATGAGATGTGACTGGAAGCAATATGTGCAACTTCCCTCCACTTCCTCTCTAGCACTTAAATATCGTTaGGTTCCCTTTTGTATCAGA +
Preference number: 5 (lower is better)
Translates to: PMRCDWKQYVQLPSTSSLALKYR*VPFCIR
Trigger: TCTGATACAAAAGGGAACCAAACGATATTTAAGTGC...TAGAGAGGAAGTGGAGGGAAGTTGCACATATTGCTTCCAGTCACATCTCATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTGAAGTTCAAGGGCTTTaGTGTTGCAGATGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: WPIWDALLPYLISPIAKCEVQGL*CCRCCW
Trigger: CCAGCAACATCTGCAACACAAAAGCCCTTGAACTTC...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCGAGATGAACTTGAGGTaGAATGTTCTCTCAAAGAGA +
Preference number: 5 (lower is better)
Translates to: ERVFWRLRSGLGKASLNIEMNLR*NVLSKR
Trigger: TCTCTTTGAGAGAACATTCAACCTCAAGTTCATCTC...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ACAAATGCTTCTGGGAAATTGCAGCTGGCTTCTTGCATTATTGGCAGGAAGCTTCTGCCTAAAAAGTCATaGATCTCTCAGCTCATTGAT +
Preference number: 5 (lower is better)
Translates to: TNASGKLQLASCIIGRKLLPKKS*ISQLID
Trigger: ATCAATGAGCTGAGAGATCAATGACTTTTTAGGCAG...AAGCTTCCTGCCAATAATGCAAGAAGCCAGCTGCAATTTCCCAGAAGCATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTGTGGGCAGTCCATTTTaGGAGAATAAACTGTATCCC +
Preference number: 5 (lower is better)
Translates to: WPIWDALLPYLISPIAKCVGSPF*ENKLYP
Trigger: GGGATACAGTTTATTCTCCAAAAATGGACTGCCCAC...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GAGAGAGTATTCTGGAGGCTGAGAAGTGGCTTAGGTAAAGCTAGCTTAAACATCTCTTTTCTTGGGCTTTaGACACTGATATATCTGGAG +
Preference number: 5 (lower is better)
Translates to: ERVFWRLRSGLGKASLNISFLGL*TLIYLE
Trigger: CTCCAGATATATCAGTGTCAAAAGCCCAAGAAAAGA...GATGTTTAAGCTAGCTTTACCTAAGCCACTTCTCAGCCTCCAGAATACTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp GAACCTGCCCACTTGCTCAGAAGGGCTAATTTGAAGTCTCAAGGAATTAGTTCATCGTTTGGTTCCCTTTaGTATCAGATACTGATAGTC +
Preference number: 5 (lower is better)
Translates to: EPAHLLRRANLKSQGISSSFGSL*YQILIV
Trigger: GACTATCAGTATCTGATACAAAAGGGAACCAAACGA...TGAACTAATTCCTTGAGACTTCAAATTAGCCCTTCTGAGCAAGTGGGCAGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTTGTCAATCTGGCCCTTaGATGAGTTCCCATAATGCA +
Preference number: 5 (lower is better)
Translates to: WPIWDALLPYLISPIAKCCQSGP*MSSHNA
Trigger: TGCATTATGGGAACTCATCAAAGGGCCAGATTGACA...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCGAGATGAACTTGAGGTaGAATGTTCTCTCAAAGAGA +
Preference number: 5 (lower is better)
Translates to: TYTQSCLILISNLGTGASEMNLR*NVLSKR
Trigger: TCTCTTTGAGAGAACATTCAACCTCAAGTTCATCTC...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCACAAGCAACATTTACTaGGCCCCTTTTAACTTACTC +
Preference number: 5 (lower is better)
Translates to: TYTQSCLILISNLGTGASTSNIY*APFNLL
Trigger: GAGTAAGTTAAAAGGGGCCAAGTAAATGTTGCTTGT...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TATTCTTATCTCCTTGCTAGGTCTATCCTGGGGACCTTCTTGCCAATATTAGTAAATGAAAGCAGTATGTaGCTGACAAAGTACCAGGAG +
Preference number: 5 (lower is better)
Translates to: YSYLLARSILGTFLPILVNESSM*LTKYQE
Trigger: CTCCTGGTACTTTGTCAGCAACATACTGCTTTCATT...TACTAATATTGGCAAGAAGGTCCCCAGGATAGACCTAGCAAGGAGATAAGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp ACATATACACAAAGTTGTCTCATCCTAATCTCCAATCTGGGTACTGGAGCTTCCAAGTACACAAAACTTTaGCTCCTCAAAACACTGGTT +
Preference number: 5 (lower is better)
Translates to: TYTQSCLILISNLGTGASKYTKL*LLKTLV
Trigger: AACCAGTGTTTTGAGGAGCAAAAGTTTTGTGTACTT...GGAAGCTCCAGTACCCAGATTGGAGATTAGGATGAGACAACTTTGTGTATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTATATCTGGAGTTGATTaGGTTTGGGATTTAATGCTC +
Preference number: 5 (lower is better)
Translates to: WPIWDALLPYLISPIAKCISGVD*VWDLML
Trigger: GAGCATTAAATCCCAAACCAAATCAACTCCAGATAT...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS-3UTR CAA 90 bp TGGCCTATATGGGATGCACTCCTACCCTACTTAATATCACCAATTGCAAAATGTAGCTGTAAAACCAGTTaGCCTTTAAGTAAGAGAGAA +
Preference number: 5 (lower is better)
Translates to: WPIWDALLPYLISPIAKCSCKTS*PLSKRE
Trigger: TTCTCTCTTACTTAAAGGCAAACTGGTTTTACAGCT...ACATTTTGCAATTGGTGATATTAAGTAGGGTAGGAGTGCATCCCATATAGGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS CAA 90 bp CGCGGGGCTGTGGAGCCGCGAGGGCTGACGGCGCTCGCCGCAAGTTaGCAGAGCGGCCCCCGCAGCGCAGCGGCAGCGGGCGAGGCGCCT +
Preference number: 6 (lower is better)
Translates to: RGAVEPRGLTALAAS*QSGPRSAAAAGEAP
Trigger: AGGCGCCTCGCCCGCTGCCGCTGCGCTGCGGGGGCCGCTCTGCAAACTTGCGGCGAGCGCCGTCAGCCCTCGCGGCTCCACAGCCCCGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS GCA 72 bp CGCCTCTGCGGAGACGCCTCTCCCGGCGAGTCGCACTaGCGCTCCGGGCTGTCCGCCCAGGCGCAGGCACGC +
Preference number: 6 (lower is better)
Translates to: RLCGDASPGESH*RSGLSAQAQAR
Trigger: GCGTGCCTGCGCCTGGGCGGACAGCCCGGAGCGGCAGTGCGACTCGCCGGGAGAGGCGTCTCCGCAGAGGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS CCA 72 bp CAGGCGCTCAGGCGCTGGGGAGCGGGGTTCGGGTCCTaGACCTGCCGCGCGCAGCCGGGCAGCCGGGTAGCT +
Preference number: 6 (lower is better)
Translates to: QALRRWGAGFGS*TCRAQPGSRVA
Trigger: AGCTACCCGGCTGCCCGGCTGCGCGCGGCAGGTCCAGGACCCGAACCCCGCTCCCCAGCGCCTGAGCGCCTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS GCA 72 bp CTCTCTCAGGCGACGCGCGGCATCCCGCCGGCGGCTTaGAGGCGCTCAGGCGCTGGGGAGCGGGGTTCGGGT +
Preference number: 6 (lower is better)
Translates to: LSQATRGIPPAA*RRSGAGERGSG
Trigger: ACCCGAACCCCGCTCCCCAGCGCCTGAGCGCCTGCAAGCCGCCGGCGGGATGCCGCGCGTCGCCTGAGAGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS CAA 72 bp TCCTCGGTGACAGTCCCTTCTGCAGCCCCATCTTCTTaGGGCCACTGGTGGTCCCTGTGCTCTCGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: SSVTVPSAAPSS*GHWWSLCSRCS
Trigger: GCTGCAGCGAGAGCACAGGGACCACCAGTGGCCCAAAGAAGATGGGGCTGCAGAAGGGACTGTCACCGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS CAA 90 bp ATGACCACGAAGAGGAGAGTGAGCACCGGCGTCAGCAGCCACTTGTaGAACCTTTCATCCATGGTCCCGCTCTCAGGCCGGCAGGCGAAG +
Preference number: 6 (lower is better)
Translates to: MTTKRRVSTGVSSHL*NLSSMVPLSGRQAK
Trigger: CTTCGCCTGCCGGCCTGAGAGCGGGACCATGGATGAAAGGTTCAACAAGTGGCTGCTGACGCCGGTGCTCACTCTCCTCTTCGTGGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS CAA 90 bp ATGATGACCACGAAGAGGAGAGTGAGCACCGGCGTCAGCAGCCACTaGTTGAACCTTTCATCCATGGTCCCGCTCTCAGGCCGGCAGGCG +
Preference number: 6 (lower is better)
Translates to: MMTTKRRVSTGVSSH*LNLSSMVPLSGRQA
Trigger: CGCCTGCCGGCCTGAGAGCGGGACCATGGATGAAAGGTTCAACAAGTGGCTGCTGACGCCGGTGCTCACTCTCCTCTTCGTGGTCATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS CAA 72 bp AAGAGGAGAGTGAGCACCGGCGTCAGCAGCCACTTGTaGAACCTTTCATCCATGGTCCCGCTCTCAGGCCGG +
Preference number: 6 (lower is better)
Translates to: KRRVSTGVSSHL*NLSSMVPLSGR
Trigger: CCGGCCTGAGAGCGGGACCATGGATGAAAGGTTCAACAAGTGGCTGCTGACGCCGGTGCTCACTCTCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS CAA 72 bp AAATCCACGAAGCGGGTCAGGTCCTTCAGGCTGAAGTaGAAGCGCGGCACGAATCGGGGCAGGGAGCCGTTT +
Preference number: 6 (lower is better)
Translates to: KSTKRVRSFRLK*KRGTNRGREPF
Trigger: AAACGGCTCCCTGCCCCGATTCGTGCCGCGCTTCAACTTCAGCCTGAAGGACCTGACCCGCTTCGTGGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS TCA 72 bp GTCACCATCTCACCACCTGGCTGTTGTAGTCCTCGGTaGCAGTCCCTTCTGCAGCCCCATCTTCTTTGGGCC +
Preference number: 6 (lower is better)
Translates to: VTISPPGCCSPR*QSLLQPHLLWA
Trigger: GGCCCAAAGAAGATGGGGCTGCAGAAGGGACTGTCACCGAGGACTACAACAGCCAGGTGGTGAGATGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS CCA 72 bp TTGGTGCAGGAGCTGGTGCAGGAGGGGGACACGTACTaGTACATGATGACCACGAAGAGGAGAGTGAGCACC +
Preference number: 6 (lower is better)
Translates to: LVQELVQEGDTY*YMMTTKRRVST
Trigger: GGTGCTCACTCTCCTCTTCGTGGTCATCATGTACCAGTACGTGTCCCCCTCCTGCACCAGCTCCTGCACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS CAA 72 bp ACGAAGAGGAGAGTGAGCACCGGCGTCAGCAGCCACTaGTTGAACCTTTCATCCATGGTCCCGCTCTCAGGC +
Preference number: 6 (lower is better)
Translates to: TKRRVSTGVSSH*LNLSSMVPLSG
Trigger: GCCTGAGAGCGGGACCATGGATGAAAGGTTCAACAAGTGGCTGCTGACGCCGGTGCTCACTCTCCTCTTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS CAA 72 bp AAGTTTAGATCCTCAATGCGTTGGCGGGCACCCTCGTaGATCTCCACGTTAGAAGCCCGCGTGATGTTGAAC +
Preference number: 6 (lower is better)
Translates to: KFRSSMRWRAPS*ISTLEARVMLN
Trigger: GTTCAACATCACGCGGGCTTCTAACGTGGAGATCAACGAGGGTGCCCGCCAACGCATTGAGGATCTAAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS CAA 90 bp ATGTCCAGGAAGTTTAGATCCTCAATGCGTTGGCGGGCACCCTCGTaGATCTCCACGTTAGAAGCCCGCGTGATGTTGAACTGTGTGAAG +
Preference number: 6 (lower is better)
Translates to: MSRKFRSSMRWRAPS*ISTLEARVMLNCVK
Trigger: CTTCACACAGTTCAACATCACGCGGGCTTCTAACGTGGAGATCAACGAGGGTGCCCGCCAACGCATTGAGGATCTAAACTTCCTGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1
CDS TCA 72 bp CGCTCAGGTAACGTGACACTGGATCCCGTAACATTGTaGTGTAATAGAAATTCCTGGTGTGGCTGTGGTTGC +
Preference number: 6 (lower is better)
Translates to: RSGNVTLDPVTL*CNRNSWCGCGC
Trigger: GCAACCACAGCCACACCAGGAATTTCTATTACATCACAATGTTACGGGATCCAGTGTCACGTTACCTGAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376705.4
CDS GCA 72 bp GAGCCCAAAGAAGGCCATGTTCTTCAGGTTGTTCTTTaGACTCTGCAACAGGATGGTGTTTCTTTCACTCTC +
Preference number: 6 (lower is better)
Translates to: EPKEGHVLQVVL*TLQQDGVSFTL
Trigger: GAGAGTGAAAGAAACACCATCCTGTTGCAGAGTGCAAAGAACAACCTGAAGAACATGGCCTTCTTTGGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376705.4
ENST00000620595.1