RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HS6ST2 (Homo sapiens)

Ensembl gene IDs: ENSG00000171004

Ensembl transcript IDs: ENST00000370833.6, ENST00000370836.6, ENST00000406696.4, ENST00000521489.5, ENST00000602570.1, ENST00000640529.1

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTTAGTGTAAGTCCTTGCATAAGTATAGCAAAATCCACAGTAAAATaGAAACTGCCCGGAATCATGATGCTTGACAGCACAGTGGGTTAC +
Preference number: 1 (lower is better)
Translates to: VSVSPCISIAKSTVK*KLPGIMMLDSTVGY
Trigger: GTAACCCACTGTGCTGTCAAGCATCATGATTCCGGGCAGTTTTCATTTTACTGTGGATTTTGCTATACTTATGCAAGGACTTACACTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR TCA 90 bp GCTATATTACTACAGATGAAACACATGAGCAGATTGTACAAGATGTaGCTTTATGGTCACACTTCTAAGCATGTCCCTTGTGAAAACATA +
Preference number: 1 (lower is better)
Translates to: AILLQMKHMSRLYKM*LYGHTSKHVPCENI
Trigger: TATGTTTTCACAAGGGACATGCTTAGAAGTGTGACCATAAAGTCACATCTTGTACAATCTGCTCATGTGTTTCATCTGTAGTAATATAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR GCA 90 bp TACCATAGAAGTATTTTTGCATCGACTTACACTACCAAATTACTCTaGTCAACTCATATGTTCCTGATATGTAACCTCACTACAGAACAC +
Preference number: 1 (lower is better)
Translates to: YHRSIFASTYTTKLL*STHMFLICNLTTEH
Trigger: GTGTTCTGTAGTGAGGTTACATATCAGGAACATATGAGTTGAGCAGAGTAATTTGGTAGTGTAAGTCGATGCAAAAATACTTCTATGGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR TCA 90 bp CATCGACTTACACTACCAAATTACTCTGCTCAACTCATATGTTCCTaGTATGTAACCTCACTACAGAACACTTTTTACTTTTGCTCTTTT +
Preference number: 1 (lower is better)
Translates to: HRLTLPNYSAQLICS*YVTSLQNTFYFCSF
Trigger: AAAAGAGCAAAAGTAAAAAGTGTTCTGTAGTGAGGTTACATATCAGGAACATATGAGTTGAGCAGAGTAATTTGGTAGTGTAAGTCGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR-3UTR TCA 90 bp GTCAAGAAAATCTATTTTAAACCCAAATACCCAGCTTCTTGTCCAGTTTGTGGCAACTGCCCGGAATCATaGTGCTTGACAGCACAGTGG +
Preference number: 2 (lower is better)
Translates to: VKKIYFKPKYPASCPVCGNCPES*CLTAQW
Trigger: CCACTGTGCTGTCAAGCATCATGATTCCGGGCAGTT...GCCACAAACTGGACAAGAAGCTGGGTATTTGGGTTTAAAATAGATTTTCTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR-3UTR TCA 90 bp CAGTCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTGAAATTACAGTGCCCTaGAAGCGCCTGGAAATTAGA +
Preference number: 2 (lower is better)
Translates to: QSPCLIYSQEVSVSPCISEITVP*KRLEIR
Trigger: TCTAATTTCCAGGCGCTTTCAGGGCACTGTAATTTC...ACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR-3UTR TCA 90 bp TCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTATAAGAGAAGCCTTAAAATaGATGAGAAGCAGCGCCAAA +
Preference number: 2 (lower is better)
Translates to: SPCLIYSQEVSVSPCISIREALK*MRSSAK
Trigger: TTTGGCGCTGCTTCTCATTCATTTTAAGGCTTCTCT...TATACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR-3UTR GCA 90 bp GTCAAGAAAATCTATTTTAAACCCAAATACCCAGCTTCTTGTCCAGTTTGTGGCCTTTGTAGAAGGGTTTaGCCACATTATCAAGGTGCT +
Preference number: 2 (lower is better)
Translates to: VKKIYFKPKYPASCPVCGLCRRV*PHYQGA
Trigger: AGCACCTTGATAATGTGGGCAAACCCTTCTACAAAG...GCCACAAACTGGACAAGAAGCTGGGTATTTGGGTTTAAAATAGATTTTCTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR-3UTR CCA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGATTTTCAGTGGCGCTTTaGGAGAAGTATGTACAGGCC +
Preference number: 2 (lower is better)
Translates to: ILSDKTKARNTDTSSESRFSVAL*EKYVQA
Trigger: GGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAA...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR-3UTR CCA 90 bp CAGTCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTTGCTTGACAGCACAGTaGGTTACATACTTCTTTTTA +
Preference number: 2 (lower is better)
Translates to: QSPCLIYSQEVSVSPCISCLTAQ*VTYFFL
Trigger: TAAAAAGAAGTATGTAACCCACTGTGCTGTCAAGCA...ACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR-3UTR TCA 90 bp GTCAAGAAAATCTATTTTAAACCCAAATACCCAGCTTCTTGTCCAGTTTGTGGCAAATCCACAGTAAAATaGAAACTGCCCGGAATCATG +
Preference number: 2 (lower is better)
Translates to: VKKIYFKPKYPASCPVCGKSTVK*KLPGIM
Trigger: CATGATTCCGGGCAGTTTTCATTTTACTGTGGATTT...GCCACAAACTGGACAAGAAGCTGGGTATTTGGGTTTAAAATAGATTTTCTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR-3UTR CCA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGAATGCCATCTTTTCAGTaGCGCTTTGGGAGAAGTATG +
Preference number: 2 (lower is better)
Translates to: ILSDKTKARNTDTSSESRMPSFQ*RFGRSM
Trigger: CATACTTCTCCCAAAGCGCCACTGAAAAGATGGCAT...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR-3UTR CCA 90 bp GTCAAGAAAATCTATTTTAAACCCAAATACCCAGCTTCTTGTCCAGTTTGTGGCTGCCCTGAAAGCGCCTaGAAATTAGATCTTTACATT +
Preference number: 2 (lower is better)
Translates to: VKKIYFKPKYPASCPVCGCPESA*KLDLYI
Trigger: AATGTAAAGATCTAATTTCCAGGCGCTTTCAGGGCA...GCCACAAACTGGACAAGAAGCTGGGTATTTGGGTTTAAAATAGATTTTCTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR-3UTR TCA 90 bp TCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTATAAGTATAACACTGAATTaGAAGGCAACTGTAAAGGCA +
Preference number: 2 (lower is better)
Translates to: SPCLIYSQEVSVSPCISISITLN*KATVKA
Trigger: TGCCTTTACAGTTGCCTTTCAATTCAGTGTTATACT...TATACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR-3UTR GCA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGATTGTTGAAATTACAGTaGCCTGAAAGCGCCTGGAAA +
Preference number: 2 (lower is better)
Translates to: ILSDKTKARNTDTSSESRLLKLQ*PESAWK
Trigger: TTTCCAGGCGCTTTCAGGGCACTGTAATTTCAACAA...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR-3UTR GCA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGATCATCTTTTAAGCTATaGCATCTTTTCAGTGGCGCT +
Preference number: 2 (lower is better)
Translates to: ILSDKTKARNTDTSSESRSSFKL*HLFSGA
Trigger: AGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGA...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR-3UTR CCA 90 bp GTCAAGAAAATCTATTTTAAACCCAAATACCCAGCTTCTTGTCCAGTTTGTGGCAATAGTTGGCCCAACTaGAAACATTACAATAGAGAT +
Preference number: 2 (lower is better)
Translates to: VKKIYFKPKYPASCPVCGNSWPN*KHYNRD
Trigger: ATCTCTATTGTAATGTTTCCAGTTGGGCCAACTATT...GCCACAAACTGGACAAGAAGCTGGGTATTTGGGTTTAAAATAGATTTTCTTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR-3UTR CAA 90 bp CAGTCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTCTTTTCAGTGGCGCTTaGGGAGAAGTATGTACAGGC +
Preference number: 3 (lower is better)
Translates to: QSPCLIYSQEVSVSPCISLFSGA*GEVCTG
Trigger: GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAG...ACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR TCA 72 bp CTACAGATGAAACACATGAGCAGATTGTACAAGATGTaGCTTTATGGTCACACTTCTAAGCATGTCCCTTGT +
Preference number: 3 (lower is better)
Translates to: LQMKHMSRLYKM*LYGHTSKHVPC
Trigger: ACAAGGGACATGCTTAGAAGTGTGACCATAAAGTCACATCTTGTACAATCTGCTCATGTGTTTCATCTGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR-3UTR CAA 90 bp GTCAAGAAAATCTATTTTAAACCCAAATACCCAGCTTCTTGTCCAGTTTGTGGCCAGTATAACACTGAATaGAAAGGCAACTGTAAAGGC +
Preference number: 3 (lower is better)
Translates to: VKKIYFKPKYPASCPVCGQYNTE*KGNCKG
Trigger: GCCTTTACAGTTGCCTTTCAATTCAGTGTTATACTG...GCCACAAACTGGACAAGAAGCTGGGTATTTGGGTTTAAAATAGATTTTCTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR GCA 72 bp AGCGCCAAAATGATTCCAGTATTGTTGAAATTACAGTaGCCTGAAAGCGCCTGGAAATTAGATCTTTACATT +
Preference number: 3 (lower is better)
Translates to: SAKMIPVLLKLQ*PESAWKLDLYI
Trigger: AATGTAAAGATCTAATTTCCAGGCGCTTTCAGGGCACTGTAATTTCAACAATACTGGAATCATTTTGGCGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR-3UTR CAA 90 bp TCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTATAATGATTCCAGTATTGTaGAAATTACAGTGCCCTGAA +
Preference number: 3 (lower is better)
Translates to: SPCLIYSQEVSVSPCISIMIPVL*KLQCPE
Trigger: TTCAGGGCACTGTAATTTCAACAATACTGGAATCAT...TATACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR GCA 72 bp AGTATTTTTGCATCGACTTACACTACCAAATTACTCTaGTCAACTCATATGTTCCTGATATGTAACCTCACT +
Preference number: 3 (lower is better)
Translates to: SIFASTYTTKLL*STHMFLICNLT
Trigger: AGTGAGGTTACATATCAGGAACATATGAGTTGAGCAGAGTAATTTGGTAGTGTAAGTCGATGCAAAAATACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR CCA 72 bp AAAATATCTAAACAGCAATTTCTGGTGAGTCTGGTTTaGCTTTCGGATTTCATATTTAGTCCAACCCCAAAA +
Preference number: 3 (lower is better)
Translates to: KISKQQFLVSLV*LSDFIFSPTPK
Trigger: TTTTGGGGTTGGACTAAATATGAAATCCGAAAGCCAAACCAGACTCACCAGAAATTGCTGTTTAGATATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR TCA 72 bp ACACTACCAAATTACTCTGCTCAACTCATATGTTCCTaGTATGTAACCTCACTACAGAACACTTTTTACTTT +
Preference number: 3 (lower is better)
Translates to: TLPNYSAQLICS*YVTSLQNTFYF
Trigger: AAAGTAAAAAGTGTTCTGTAGTGAGGTTACATATCAGGAACATATGAGTTGAGCAGAGTAATTTGGTAGTGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370836.6
3UTR CCA 72 bp TTGACAGCACAGTGGGTTACATACTTCTTTTTATCTTaGTCAGCTTGTAATAGGTACCATAGAAGTATTTTT +
Preference number: 3 (lower is better)
Translates to: LTAQWVTYFFLS*SACNRYHRSIF
Trigger: AAAAATACTTCTATGGTACCTATTACAAGCTGACCAAGATAAAAAGAAGTATGTAACCCACTGTGCTGTCAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR TCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCACCGGCACCGGGGAGCTaGACGCCTGCAGGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPPAPGS*TPAGGG
Trigger: TCCTCCGCCTGCAGGCGTTCAGCTCCCCGGTGCCGG...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAGGACGTGCATCCGCCTaGGGCGGCCCCGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPGRASA*GGPGTA
Trigger: TGCTGTCCCGGGGCCGCCGCAGGCGGATGCACGTCC...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCACGTCGCCTGAGGACGTaGATCCGCCTGCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPRRLRT*IRLRRP
Trigger: GGGCCGCCGCAGGCGGATGCACGTCCTCAGGCGACG...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAGCCTGGCGTCGCGCTTaGCGTCCACCACGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPAWRRA*RPPRRA
Trigger: TGCCCTCCGTGGTGGACGGCAAGCGCGACGCCAGGC...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAACGTGCTTCAGCGAGTaGCCCAGGGCGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPTCFSE*PRAARP
Trigger: GGGCCTGGCCGCCCTGGGCCACTCGCTGAAGCACGT...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCGGTCCCAGCGTCGCCTaGGGACGTGCATCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSGPSVA*GRASAC
Trigger: GCAGGCGGATGCACGTCCTCAGGCGACGCTGGGACC...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTCGTCGCCTGAGGACGTaGATCCGCCTGCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFRRLRT*IRLRRP
Trigger: GGGCCGCCGCAGGCGGATGCACGTCCTCAGGCGACG...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGCTCCTCGCTCCGGTTaGCGCGGCGGCTCGAACTCC +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFAPRSG*RGGSNS
Trigger: GGAGTTCGAGCCGCCGCGGCAACCGGAGCGAGGAGC...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp CAGTCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTGGCGGGGACAGGTGGTaGGGACGGGCGCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: QSPCLIYSQEVSVSPCISGGDRW*GRALLA
Trigger: AGCGAGGAGCGCCCGTCCGCACCACCTGTCCCCGCC...ACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR TCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCACCGGGTCTTTGTGGATaGCGGAGAGTTGGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPPGLCG*RRVGAC
Trigger: GCAGGCGCCAACTCTCCGTCATCCACAAAGACCCGG...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521489.5
CDS-3UTR GCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCATGTCGAAGTCTACCTTaGGCAGGAGGTCGCCGCGGG +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPCRSLP*AGGRRG
Trigger: CCCGCGGCGACCTCCTGCGCAAGGTAGACTTCGACA...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp CAGTCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTACGTGCTTCAGCGAGTaGCCCAGGGCGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QSPCLIYSQEVSVSPCISTCFSE*PRAARP
Trigger: GGGCCTGGCCGCCCTGGGCCACTCGCTGAAGCACGT...ACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCTGCAGGCGGAGGAGCTaGCATTCTGTGCCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSCRRRS*HSVPGH
Trigger: GTGCCCCGGCACAGAATGCCAGCTCCTCCGCCTGCA...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCTGGACGGTCTCAGCCTaGCGTCGCGCTTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSWTVSA*RRACRP
Trigger: TGGACGGCAAGCGCGACGCCAGGCTGAGACCGTCCA...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCGGAGGTCGCCGCGGGTaGAATTGTAGCGGGGCACGA +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGGGRRG*NCSGAR
Trigger: TCGTGCCCCGCTACAATTTCACCCGCGGCGACCTCC...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCACTCGAACTCCCGGACTaGACACGCAGGCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPLELPD*TRRQCH
Trigger: ATGGCACTGCCTGCGTGTGCAGTCCGGGAGTTCGAG...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCCCGGGCCGGCTCGCTaGCAATTCGGCCTCTACTCT +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGPGPAR*QFGLYS
Trigger: AGAGTAGAGGCCGAATTGGCAGCGAGCCGGCCCGGG...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCATCGCACCGAGCACGTaGTTCAGCGAGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSIAPST*FSEWPR
Trigger: CCTGGGCCACTCGCTGAAGCACGTGCTCGGTGCGAT...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAATTCGGCCTCTACTCTaGAATGCCGGCGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPIRPLL*NAGGDR
Trigger: CCTGTCCCCGCCGGCATTCCAGAGTAGAGGCCGAAT...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCTGCAGGCGGAGGAGCTaGCATTCTGTGCCGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGCRRRS*HSVPGH
Trigger: GTGCCCCGGCACAGAATGCCAGCTCCTCCGCCTGCA...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTAGCGGGGCACGAACCTaGCGGAGCTCTCATCCTCCG +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFSGART*RSSHPP
Trigger: CGGAGGATGAGAGCTCCGCCAGGTTCGTGCCCCGCT...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCTGGACGGTCTCAGCCTaGCGTCGCGCTTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGWTVSA*RRACRP
Trigger: TGGACGGCAAGCGCGACGCCAGGCTGAGACCGTCCA...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp TCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTATAGGTCCCAGCGTCGCCTaGGGACGTGCATCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SPCLIYSQEVSVSPCISIGPSVA*GRASAC
Trigger: GCAGGCGGATGCACGTCCTCAGGCGACGCTGGGACC...TATACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp GTCAAGAAAATCTATTTTAAACCCAAATACCCAGCTTCTTGTCCAGTTTGTGGCGCTCCTCGCTCCGGTTaGCGCGGCGGCTCGAACTCC +
Preference number: 4 (lower is better)
Translates to: VKKIYFKPKYPASCPVCGAPRSG*RGGSNS
Trigger: GGAGTTCGAGCCGCCGCGGCAACCGGAGCGAGGAGC...GCCACAAACTGGACAAGAAGCTGGGTATTTGGGTTTAAAATAGATTTTCTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTATCGCACCGAGCACGTaGTTCAGCGAGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFIAPST*FSEWPR
Trigger: CCTGGGCCACTCGCTGAAGCACGTGCTCGGTGCGAT...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAGGAGCTGGCATTCTGTaGCGGGGCACACGTATTGGA +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPGAGIL*RGTRIG
Trigger: TCCAATACGTGTGCCCCGGCACAGAATGCCAGCTCC...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCGGCACTCGCACGGCTaGTCCAGCTGGATGTTACGC +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGRHSHG*SSWMLR
Trigger: GCGTAACATCCAGCTGGAGCAGCCGTGCGAGTGCCG...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTATAGCCTGGCGTCGCGCTTaGCGTCCACCACGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SPCLIYSQEVSVSPCISIAWRRA*RPPRRA
Trigger: TGCCCTCCGTGGTGGACGGCAAGCGCGACGCCAGGC...TATACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCGCCAGTGTAGCAGCTaGGCAGCTCTTCGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSRQCSS*AALRRL
Trigger: CAACCTCCGAAGAGCTGCCCAGCTGCTACACTGGCG...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGACCGGCACCGGGGAGCTaGACGCCTGCAGGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: ILSDKTKARNTDTSSESRPAPGS*TPAGGG
Trigger: TCCTCCGCCTGCAGGCGTTCAGCTCCCCGGTGCCGG...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR TCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCATCCGCTGAAACTCAGTaGGGCCGAAGAACGCCATGT +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPSAETQ*GRRTPC
Trigger: ACATGGCGTTCTTCGGCCTCACTGAGTTTCAGCGGA...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAAATTTGCGTTGTTCCTaGCGCTTTCGCCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPNLRCS*RFRLAS
Trigger: GGAGGCCAGGCGAAAGCGTCAGGAACAACGCAAATT...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTCTCGAACTCCCGGACTaGACACGCAGGCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFLELPD*TRRQCH
Trigger: ATGGCACTGCCTGCGTGTGCAGTCCGGGAGTTCGAG...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGAGGACGTGCATCCGCCTaGGGCGGCCCCGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: ILSDKTKARNTDTSSESRGRASA*GGPGTA
Trigger: TGCTGTCCCGGGGCCGCCGCAGGCGGATGCACGTCC...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCGGAGCTGGCATTCTGTaGCGGGGCACACGTATTGGA +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSGAGIL*RGTRIG
Trigger: TCCAATACGTGTGCCCCGGCACAGAATGCCAGCTCC...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTATTCGGCCTCTACTCTaGAATGCCGGCGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFIRPLL*NAGGDR
Trigger: CCTGTCCCCGCCGGCATTCCAGAGTAGAGGCCGAAT...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCACCGGGGCACACGTATTaGAGGACGATCACGGCAAAT +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPPGHTY*RTITAN
Trigger: ATTTGCCGTGATCGTCCTCCAATACGTGTGCCCCGG...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCACGGCTGCTCCAGCTaGATGTTACGCACCAAGTGG +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSHGCSS*MLRTKW
Trigger: CCACTTGGTGCGTAACATCCAGCTGGAGCAGCCGTG...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAGCTCTTCGGAGGTTaGAGGCCTTCCATCGCAGAC +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSQLFGG*RPSIAD
Trigger: GTCTGCGATGGAAGGCCTCCAACCTCCGAAGAGCTG...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTCAAGTGCATTTCTTCTaGCCCACGCGGCACTCGCAC +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFQVHFF*PTRHSH
Trigger: GTGCGAGTGCCGCGTGGGTCAGAAGAAATGCACTTG...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCGGAGAGTTGGCGCCTaGGTTAGTGTTTGGAGAACC +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSRRVGA*VSVWRT
Trigger: GGTTCTCCAAACACTAACGCAGGCGCCAACTCTCCG...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521489.5
CDS-3UTR GCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAGGATGCTTTCCATGTTaGCCCTCTCTGGACATGCCT +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPGCFPC*PSLDMP
Trigger: AGGCATGTCCAGAGAGGGGCAACATGGAAAGCATCC...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAGCAGACATGCAGGGATaGTTTCCATGTTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPADMQG*FPCCPS
Trigger: AGAGGGGCAACATGGAAAGCATCCCTGCATGTCTGC...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCTCCCGACGCTGGCCATaGGGCCGAAAATCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGSRRWP*GRKSWR
Trigger: TCTCCAAGATTTTCGGCCCCATGGCCAGCGTCGGGA...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTCACGGCTGCTCCAGCTaGATGTTACGCACCAAGTGG +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFHGCSS*MLRTKW
Trigger: CCACTTGGTGCGTAACATCCAGCTGGAGCAGCCGTG...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTCAGCTCTTCGGAGGTTaGAGGCCTTCCATCGCAGAC +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFQLFGG*RPSIAD
Trigger: GTCTGCGATGGAAGGCCTCCAACCTCCGAAGAGCTG...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCTCTGGAAATGGGTCTaGAGGAGCCTTCCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSLWKWV*RSLPFR
Trigger: TCTGAAGGGAAGGCTCCTTCAGACCCATTTCCAGAG...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCGAGAACTCTGTCATCTaGGCAGGGCTTCTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSENSVI*AGLLVV
Trigger: GACAACCAGAAGCCCTGCTCAGATGACAGAGTTCTC...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTATATGTCGAAGTCTACCTTaGGCAGGAGGTCGCCGCGGG +
Preference number: 4 (lower is better)
Translates to: SPCLIYSQEVSVSPCISICRSLP*AGGRRG
Trigger: CCCGCGGCGACCTCCTGCGCAAGGTAGACTTCGACA...TATACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCATATCATTCTGCTCCTTaGCTGAGTTCTGCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPYHSAP*LSSASG
Trigger: GCCCGAAGCAGAACTCAGGCAAGGAGCAGAATGATA...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTCAAGTACCGGGACACTaGGTCTCGGAGGATGGTGAT +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFQVPGH*VSEDGD
Trigger: ATCACCATCCTCCGAGACCCAGTGTCCCGGTACTTG...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTCATGTTGCCCCTCTCTaGACATGCCTCCACTCACTC +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFHVAPL*TCLHSL
Trigger: GAGTGAGTGGAGGCATGTCCAGAGAGGGGCAACATG...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCCTGACGCTTTCGCCTaGCCTCCTGATGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGPDAFA*PPDALS
Trigger: AGAAAGAGCATCAGGAGGCCAGGCGAAAGCGTCAGG...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCAGCGGGGGCATTTTCTaGAAGGCGAGGAGAACTCTG +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGSGGIF*KARRTL
Trigger: CAGAGTTCTCCTCGCCTTCCAGAAAATGCCCCCGCT...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTCTCTGGAAATGGGTCTaGAGGAGCCTTCCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFLWKWV*RSLPFR
Trigger: TCTGAAGGGAAGGCTCCTTCAGACCCATTTCCAGAG...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGACCCGGGCCGGCTCGCTaGCAATTCGGCCTCTACTCT +
Preference number: 4 (lower is better)
Translates to: ILSDKTKARNTDTSSESRPGPAR*QFGLYS
Trigger: AGAGTAGAGGCCGAATTGGCAGCGAGCCGGCCCGGG...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCACTTCCATCGCAGACATaGAGGGATGCTTTCCATGTT +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPLPSQT*RDAFHV
Trigger: AACATGGAAAGCATCCCTGCATGTCTGCGATGGAAG...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAGCCATTTCTCTACACTaGCTATGTAGTCGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPAISLH*LCSRWC
Trigger: GCACCAACGACTACATAGGCAGTGTAGAGAAATGGC...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATTCCCGACGCTGGCCATaGGGCCGAAAATCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYSRRWP*GRKSWR
Trigger: TCTCCAAGATTTTCGGCCCCATGGCCAGCGTCGGGA...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATCCATGTTCCCGACGCTaGCCATGGGGCCGAAAATCT +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYPCSRR*PWGRKS
Trigger: AGATTTTCGGCCCCATGGCCAGCGTCGGGAACATGG...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCTCTGAGCAGGGCTTCTaGTTGTCTCTATGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSSEQGF*LSLWCG
Trigger: ACCACACCATAGAGACAACCAGAAGCCCTGCTCAGA...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp CAGTCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTAGCGGGGGCATTTTCTaGAAGGCGAGGAGAACTCTG +
Preference number: 4 (lower is better)
Translates to: QSPCLIYSQEVSVSPCISSGGIF*KARRTL
Trigger: CAGAGTTCTCCTCGCCTTCCAGAAAATGCCCCCGCT...ACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAGGTTTTCTCTTTTCTTaGAGTACGGAGGTCACTCCG +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPGFLFS*STEVTP
Trigger: CGGAGTGACCTCCGTACTCCAAGAAAAGAGAAAACC...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp GTCAAGAAAATCTATTTTAAACCCAAATACCCAGCTTCTTGTCCAGTTTGTGGCCAAGTGCATTTCTTCTaGCCCACGCGGCACTCGCAC +
Preference number: 4 (lower is better)
Translates to: VKKIYFKPKYPASCPVCGQVHFF*PTRHSH
Trigger: GTGCGAGTGCCGCGTGGGTCAGAAGAAATGCACTTG...GCCACAAACTGGACAAGAAGCTGGGTATTTGGGTTTAAAATAGATTTTCTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR TCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCGCTGCATCTAGAATCTaGAAAATCCTCCACCTGGAC +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSAASRI*KILHLD
Trigger: GTCCAGGTGGAGGATTTTTCAGATTCTAGATGCAGC...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521489.5
CDS-3UTR TCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATTCCGCTGAAACTCAGTaGGGCCGAAGAACGCCATGT +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYSAETQ*GRRTPC
Trigger: ACATGGCGTTCTTCGGCCTCACTGAGTTTCAGCGGA...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATAATTTGCGTTGTTCCTaGCGCTTTCGCCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYNLRCS*RFRLAS
Trigger: GGAGGCCAGGCGAAAGCGTCAGGAACAACGCAAATT...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCGGAATCATGATGCTTaGCAGCACAGTGGGTTACAT +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSRNHDA*QHSGLH
Trigger: ATGTAACCCACTGTGCTGTCAAGCATCATGATTCCG...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGACGGCACTCGCACGGCTaGTCCAGCTGGATGTTACGC +
Preference number: 4 (lower is better)
Translates to: ILSDKTKARNTDTSSESRRHSHG*SSWMLR
Trigger: GCGTAACATCCAGCTGGAGCAGCCGTGCGAGTGCCG...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp CAGTCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTGGATGCTTTCCATGTTaGCCCTCTCTGGACATGCCT +
Preference number: 4 (lower is better)
Translates to: QSPCLIYSQEVSVSPCISGCFPC*PSLDMP
Trigger: AGGCATGTCCAGAGAGGGGCAACATGGAAAGCATCC...ACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATTCCTTGCCTGAGTTCTaGTTCGGGCTTTCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYSLPEF*FGLSRF
Trigger: GAACCGGGAAAGCCCGAAGCAGAACTCAGGCAAGGA...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCTGGTGTTATCATTCTaGTCCTTGCCTGAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSLVLSF*SLPEFC
Trigger: GCAGAACTCAGGCAAGGAGCAGAATGATAACACCAG...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp GTCAAGAAAATCTATTTTAAACCCAAATACCCAGCTTCTTGTCCAGTTTGTGGCCCATGTTCCCGACGCTaGCCATGGGGCCGAAAATCT +
Preference number: 4 (lower is better)
Translates to: VKKIYFKPKYPASCPVCGPCSRR*PWGRKS
Trigger: AGATTTTCGGCCCCATGGCCAGCGTCGGGAACATGG...GCCACAAACTGGACAAGAAGCTGGGTATTTGGGTTTAAAATAGATTTTCTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATCCGGGGCACACGTATTaGAGGACGATCACGGCAAAT +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYPGHTY*RTITAN
Trigger: ATTTGCCGTGATCGTCCTCCAATACGTGTGCCCCGG...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGAAAAATCCTCCACCTaGACGGTCTCAGCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYEKSST*TVSAWR
Trigger: ACGCCAGGCTGAGACCGTCCAGGTGGAGGATTTTTC...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521489.5
CDS-3UTR CCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATTGTTCCGGGTCTTTGTaGATGACGGAGAGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYCSGSL*MTESWR
Trigger: GCGCCAACTCTCCGTCATCCACAAAGACCCGGAACA...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521489.5
CDS-3UTR CCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAGCTTCAGATTTGACTTaGCACTTTCCAGAAGGACCT +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPASDLT*HFPEGP
Trigger: AGGTCCTTCTGGAAAGTGCCAAGTCAAATCTGAAGC...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATCCTGACGCTTTCGCCTaGCCTCCTGATGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYPDAFA*PPDALS
Trigger: AGAAAGAGCATCAGGAGGCCAGGCGAAAGCGTCAGG...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCGTTGGTGCCATTGCTaGTGTTATCATTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSRWCHC*CYHSAP
Trigger: AGGAGCAGAATGATAACACCAGCAATGGCACCAACG...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAAGAACCGTCCTTCCATaGTTTCCAATGAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPRTVLP*FPMKRL
Trigger: CAGCCTTTTCATTGGAAACCATGGAAGGACGGTTCT...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTTCTGAGCAGGGCTTCTaGTTGTCTCTATGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFSEQGF*LSLWCG
Trigger: ACCACACCATAGAGACAACCAGAAGCCCTGCTCAGA...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCTTTTCAGTGGCGCTTTaGGAGAAGTATGTACAGGCC +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSFSVAL*EKYVQA
Trigger: GGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAA...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAATGCCATCTTTTCAGTaGCGCTTTGGGAGAAGTATG +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPMPSFQ*RFGRSM
Trigger: CATACTTCTCCCAAAGCGCCACTGAAAAGATGGCAT...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATTCAGGTCATCGCCCTTaGTGTCGAAGTCTACCTTGC +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYSGHRP*CRSLPC
Trigger: GCAAGGTAGACTTCGACATCAAGGGCGATGACCTGA...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGGTCTCGGAGGATGGTaGTGTAGTGGAAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYGLGGW*CSGSSS
Trigger: GGAAGAACTTCCACTACATCACCATCCTCCGAGACC...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521489.5
CDS-3UTR TCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCTTTGCTTTTCAGGCATaGCAGAGAGGTTGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGFAFQA*QRGCSS
Trigger: GCTGCTACAACCTCTCTGTCATGCCTGAAAAGCAAA...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCTTCTGGCTCAAACTCTaGGTCAGATTCTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSFWLKL*VRFCIR
Trigger: TCTGATGCAGAATCTGACTCAGAGTTTGAGCCAGAA...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGCAGACATGCAGGGATaGTTTCCATGTTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYADMQG*FPCCPS
Trigger: AGAGGGGCAACATGGAAAGCATCCCTGCATGTCTGC...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCCGAAGAACGCCATGTaGTTCAGATTTGACTTGGCA +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGPKNAM*FRFDLA
Trigger: TGCCAAGTCAAATCTGAAGCACATGGCGTTCTTCGG...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp GTCAAGAAAATCTATTTTAAACCCAAATACCCAGCTTCTTGTCCAGTTTGTGGCTCCTTGCCTGAGTTCTaGTTCGGGCTTTCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: VKKIYFKPKYPASCPVCGSLPEF*FGLSRF
Trigger: GAACCGGGAAAGCCCGAAGCAGAACTCAGGCAAGGA...GCCACAAACTGGACAAGAAGCTGGGTATTTGGGTTTAAAATAGATTTTCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTCTGGTGTTATCATTCTaGTCCTTGCCTGAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFLVLSF*SLPEFC
Trigger: GCAGAACTCAGGCAAGGAGCAGAATGATAACACCAG...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCATTGTTGAAATTACAGTaGCCTGAAAGCGCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPLLKLQ*PESAWK
Trigger: TTTCCAGGCGCTTTCAGGGCACTGTAATTTCAACAA...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCTAGCAGCAGCTTGTTaGATTTCTCATCCATGTTCC +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSLAAAC*ISHPCS
Trigger: GGAACATGGATGAGAAATCCAACAAGCTGCTGCTAG...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCGCCTGCGTTAGTGTTTaGAGAACCCCGTTTATCCTT +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGACVSV*RTPFIL
Trigger: AAGGATAAACGGGGTTCTCCAAACACTAACGCAGGC...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521489.5
CDS-3UTR CCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCGCTTCAGATTTGACTTaGCACTTTCCAGAAGGACCT +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSASDLT*HFPEGP
Trigger: AGGTCCTTCTGGAAAGTGCCAAGTCAAATCTGAAGC...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCTGCCTATGTAGTCGTTaGTGCCATTGCTGGTGTTAT +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSCLCSR*CHCWCY
Trigger: ATAACACCAGCAATGGCACCAACGACTACATAGGCA...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGGTTTTCTCTTTTCTTaGAGTACGGAGGTCACTCCG +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFGFLFS*STEVTP
Trigger: CGGAGTGACCTCCGTACTCCAAGAAAAGAGAAAACC...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTTTTTCAGTGGCGCTTTaGGAGAAGTATGTACAGGCC +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFFSVAL*EKYVQA
Trigger: GGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAA...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
46% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCATGCCATCTTTTCAGTaGCGCTTTGGGAGAAGTATG +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSMPSFQ*RFGRSM
Trigger: CATACTTCTCCCAAAGCGCCACTGAAAAGATGGCAT...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATTATCATTCTGCTCCTTaGCTGAGTTCTGCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYYHSAP*LSSASG
Trigger: GCCCGAAGCAGAACTCAGGCAAGGAGCAGAATGATA...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCAGTCGTTGGTGCCATTaGTGGTGTTATCATTCTGCT +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGSRWCH*WCYHSA
Trigger: AGCAGAATGATAACACCAGCAATGGCACCAACGACT...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp GTCAAGAAAATCTATTTTAAACCCAAATACCCAGCTTCTTGTCCAGTTTGTGGCTGGGGCCGAAAATCTTaGAGAAGATCGCACCGAGCA +
Preference number: 4 (lower is better)
Translates to: VKKIYFKPKYPASCPVCGWGRKS*RRSHRA
Trigger: TGCTCGGTGCGATCTTCTCCAAGATTTTCGGCCCCA...GCCACAAACTGGACAAGAAGCTGGGTATTTGGGTTTAAAATAGATTTTCTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTCTAGCAGCAGCTTGTTaGATTTCTCATCCATGTTCC +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFLAAAC*ISHPCS
Trigger: GGAACATGGATGAGAAATCCAACAAGCTGCTGCTAG...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCATTGGCATTCGGATTTaGGTTCTGACTCTGATTCTG +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSIGIRI*VLTLIL
Trigger: CAGAATCAGAGTCAGAACCCAAATCCGAATGCCAAT...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCGAGTCAGGTTCTGATTaGCATTCGGATTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGESGSD*HSDLGS
Trigger: AGAACCCAAATCCGAATGCCAATCAGAACCTGACTC...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATAACAGCAATTTCTGGTaGGTCTGGTTTGGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYNSNFW*VWFGFR
Trigger: CCGAAAGCCAAACCAGACTCACCAGAAATTGCTGTT...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR TCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCAGAGAAGCCTTAAAATaGATGAGAAGCAGCGCCAAA +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGREALK*MRSSAK
Trigger: TTTGGCGCTGCTTCTCATTCATTTTAAGGCTTCTCT...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATCTTCCATCGCAGACATaGAGGGATGCTTTCCATGTT +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYLPSQT*RDAFHV
Trigger: AACATGGAAAGCATCCCTGCATGTCTGCGATGGAAG...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCAGGACCTTGTTTCTTTaGTTTTCAGGCATGACAGAG +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGRTLFL*FSGMTE
Trigger: CTCTGTCATGCCTGAAAAGCAAAGAAACAAGGTCCT...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTTTTTCCGTCTCTCTTTaGCAATTTCCATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFFSVSL*QFPFSS
Trigger: GCTGGAGAATGGAAATTGGCAAAGAGAGACGGAAAA...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
43% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCTCATCTTTTAAGCTATaGCATCTTTTCAGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSSSFKL*HLFSGA
Trigger: AGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGA...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGACAAGTACCGGGACACTaGGTCTCGGAGGATGGTGAT +
Preference number: 4 (lower is better)
Translates to: ILSDKTKARNTDTSSESRQVPGH*VSEDGD
Trigger: ATCACCATCCTCCGAGACCCAGTGTCCCGGTACTTG...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGACATGTTGCCCCTCTCTaGACATGCCTCCACTCACTC +
Preference number: 4 (lower is better)
Translates to: ILSDKTKARNTDTSSESRHVAPL*TCLHSL
Trigger: GAGTGAGTGGAGGCATGTCCAGAGAGGGGCAACATG...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATCGTTGGTGCCATTGCTaGTGTTATCATTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYRWCHC*CYHSAP
Trigger: AGGAGCAGAATGATAACACCAGCAATGGCACCAACG...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCACAAGCAGAGAACCTaGGTTTTCTCTTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGHKQRT*VFSFLG
Trigger: TCCAAGAAAAGAGAAAACCCAGGTTCTCTGCTTGTG...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGATGTAGTGGAAGTTCCTaGACGGTCTCAGCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: ILSDKTKARNTDTSSESRCSGSS*TVSAWR
Trigger: ACGCCAGGCTGAGACCGTCCAGGAACTTCCACTACA...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR TCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCCCTCAATACGCTTTTaGATTTCCTCATTGATCTCT +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGPSIRF*ISSLIS
Trigger: AGAGATCAATGAGGAAATTCAAAAGCGTATTGAGGG...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTCCCTCAATACGCTTTTaGATTTCCTCATTGATCTCT +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFPSIRF*ISSLIS
Trigger: AGAGATCAATGAGGAAATTCAAAAGCGTATTGAGGG...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTCAACTCATATGTTCCTaGTATGTAACCTCACTACAG +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFQLICS*YVTSLQ
Trigger: CTGTAGTGAGGTTACATATCAGGAACATATGAGTTG...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp GTCAAGAAAATCTATTTTAAACCCAAATACCCAGCTTCTTGTCCAGTTTGTGGCCCGAAGAACGCCATGTaGTTCAGATTTGACTTGGCA +
Preference number: 4 (lower is better)
Translates to: VKKIYFKPKYPASCPVCGPKNAM*FRFDLA
Trigger: TGCCAAGTCAAATCTGAAGCACATGGCGTTCTTCGG...GCCACAAACTGGACAAGAAGCTGGGTATTTGGGTTTAAAATAGATTTTCTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATAGTCGTTGGTGCCATTaGTGGTGTTATCATTCTGCT +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYSRWCH*WCYHSA
Trigger: AGCAGAATGATAACACCAGCAATGGCACCAACGACT...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp TCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTATAGCCATTTCTCTACACTaGCTATGTAGTCGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SPCLIYSQEVSVSPCISIAISLH*LCSRWC
Trigger: GCACCAACGACTACATAGGCAGTGTAGAGAAATGGC...TATACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTTCATCTTTTAAGCTATaGCATCTTTTCAGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFSSFKL*HLFSGA
Trigger: AGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGA...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp CAGTCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTCTTTGTAGAAGGGTTTaGCCACATTATCAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: QSPCLIYSQEVSVSPCISLCRRV*PHYQGA
Trigger: AGCACCTTGATAATGTGGGCAAACCCTTCTACAAAG...ACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCACTACCAAATTACTCTaGTCAACTCATATGTTCCTG +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSTTKLL*STHMFL
Trigger: CAGGAACATATGAGTTGAGCAGAGTAATTTGGTAGT...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAGTTAGTGTAAGTCCTTaGATAAGTATAGCAAAATCC +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPVSVSP*ISIAKS
Trigger: GGATTTTGCTATACTTATGCAAGGACTTACACTAAC...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCAATGCACTTAATCTTTaGAAATCATGCACACCACAG +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSNALNL*KSCTPQ
Trigger: CTGTGGTGTGCATGATTTGCAAAGATTAAGTGCATT...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCACTAGTGGTATTATACTaGGTAAATGGCGAAATAAAG +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPLVVLY*VNGEIK
Trigger: CTTTATTTCGCCATTTACCCAGTATAATACCACTAG...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGAGTCAGGTTCTGATTaGCATTCGGATTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYESGSD*HSDLGS
Trigger: AGAACCCAAATCCGAATGCCAATCAGAACCTGACTC...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATAGCAAAGGCGCAAATTaGAGCTTTTCCGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYSKGAN*SFSVSL
Trigger: AAGAGAGACGGAAAAGCTCCAATTTGCGCCTTTGCT...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCTGCCCTGAAAGCGCCTaGAAATTAGATCTTTACATT +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGCPESA*KLDLYI
Trigger: AATGTAAAGATCTAATTTCCAGGCGCTTTCAGGGCA...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAAATAGTTGGCCCAACTaGAAACATTACAATAGAGAT +
Preference number: 4 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPNSWPN*KHYNRD
Trigger: ATCTCTATTGTAATGTTTCCAGTTGGGCCAACTATT...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp CAGTCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTAGGGCTAGAAATAGTTaGCCCAACTGGAAACATTAC +
Preference number: 4 (lower is better)
Translates to: QSPCLIYSQEVSVSPCISRARNS*PNWKHY
Trigger: GTAATGTTTCCAGTTGGGCCAACTATTTCTAGCCCT...ACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR TCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTCTATGGTGTGGTATaGTTTTCATTATTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGLYGVV*FSLFSQ
Trigger: CTGGGAAAATAATGAAAATCATACCACACCATAGAG...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCGATCACGAGCGAGCTTaGATTTATATAATAATGCCT +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGDHERA*IYIIMP
Trigger: AGGCATTATTATATAAATTCAAGCTCGCTCGTGATC...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTAGTATAACACTGAATTaGAAGGCAACTGTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFSITLN*KATVKA
Trigger: TGCCTTTACAGTTGCCTTTCAATTCAGTGTTATACT...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCAGTATAACACTGAATTaGAAGGCAACTGTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGSITLN*KATVKA
Trigger: TGCCTTTACAGTTGCCTTTCAATTCAGTGTTATACT...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp TCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTATAGAAATTACAGTGCCCTaGAAGCGCCTGGAAATTAGA +
Preference number: 4 (lower is better)
Translates to: SPCLIYSQEVSVSPCISIEITVP*KRLEIR
Trigger: TCTAATTTCCAGGCGCTTTCAGGGCACTGTAATTTC...TATACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR TCA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCAGATTGTACAAGATGTaGCTTTATGGTCACACTTCT +
Preference number: 4 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGRLYKM*LYGHTS
Trigger: AGAAGTGTGACCATAAAGTCACATCTTGTACAATCT...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATTTCCCTTCAGAAATTTaGGTTGTTCCTGACGCTTTC +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYFPSEI*VVPDAF
Trigger: GAAAGCGTCAGGAACAACGCAAATTTCTGAAGGGAA...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATCTATGTAGTCGTTGGTaGCATTGCTGGTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYLCSRW*HCWCYH
Trigger: ATGATAACACCAGCAATGGCACCAACGACTACATAG...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR GCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATTTTTCCGTCTCTCTTTaGCAATTTCCATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYFSVSL*QFPFSS
Trigger: GCTGGAGAATGGAAATTGGCAAAGAGAGACGGAAAA...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp GTCAAGAAAATCTATTTTAAACCCAAATACCCAGCTTCTTGTCCAGTTTGTGGCTGCCTATGTAGTCGTTaGTGCCATTGCTGGTGTTAT +
Preference number: 4 (lower is better)
Translates to: VKKIYFKPKYPASCPVCGCLCSR*CHCWCY
Trigger: ATAACACCAGCAATGGCACCAACGACTACATAGGCA...GCCACAAACTGGACAAGAAGCTGGGTATTTGGGTTTAAAATAGATTTTCTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCTTCTGGTTGTCTCTATaGTGTGGTATGATTTTCATT +
Preference number: 4 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSFWLSL*CGMIFI
Trigger: AATGAAAATCATACCACACCATAGAGACAACCAGAA...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CCA 90 bp TCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTATAAGCAAAGGCGCAAATTaGAGCTTTTCCGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SPCLIYSQEVSVSPCISISKGAN*SFSVSL
Trigger: AAGAGAGACGGAAAAGCTCCAATTTGCGCCTTTGCT...TATACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATCACAAGCAGAGAACCTaGGTTTTCTCTTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYHKQRT*VFSFLG
Trigger: TCCAAGAAAAGAGAAAACCCAGGTTCTCTGCTTGTG...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATTTAAAACTTCCCCAATaGAGGAAGCAGGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYLKLPQ*RKQDVF
Trigger: AAACACATCCTGCTTCCTTCATTGGGGAAGTTTTAA...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR TCA 90 bp GTCAAGAAAATCTATTTTAAACCCAAATACCCAGCTTCTTGTCCAGTTTGTGGCTGGGTTAATTTGGAATaGGCACAATTCAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: VKKIYFKPKYPASCPVCGWVNLE*AQFREA
Trigger: GGCTTCTCTGAATTGTGCTCATTCCAAATTAACCCA...GCCACAAACTGGACAAGAAGCTGGGTATTTGGGTTTAAAATAGATTTTCTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp TCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTATAAGGACCTTGTTTCTTTaGTTTTCAGGCATGACAGAG +
Preference number: 4 (lower is better)
Translates to: SPCLIYSQEVSVSPCISIRTLFL*FSGMTE
Trigger: CTCTGTCATGCCTGAAAAGCAAAGAAACAAGGTCCT...TATACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp GTCAAGAAAATCTATTTTAAACCCAAATACCCAGCTTCTTGTCCAGTTTGTGGCATTGGCATTCGGATTTaGGTTCTGACTCTGATTCTG +
Preference number: 4 (lower is better)
Translates to: VKKIYFKPKYPASCPVCGIGIRI*VLTLIL
Trigger: CAGAATCAGAGTCAGAACCCAAATCCGAATGCCAAT...GCCACAAACTGGACAAGAAGCTGGGTATTTGGGTTTAAAATAGATTTTCTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTGCTATTGAATAACTaGCTAGCCTTCCTAATGCTT +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYVLLNN*LAFLML
Trigger: AAGCATTAGGAAGGCTAGCCAGTTATTCAATAGCAC...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGAAACAAGCTTTTCCACTaGCTCAGGCTTCATCCTGCT +
Preference number: 4 (lower is better)
Translates to: ILSDKTKARNTDTSSESRNKLFH*LRLHPA
Trigger: AGCAGGATGAAGCCTGAGCCAGTGGAAAAGCTTGTT...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR TCA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGATTCTGGCTCAAACTCTaGGTCAGATTCTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: ILSDKTKARNTDTSSESRFWLKL*VRFCIR
Trigger: TCTGATGCAGAATCTGACTCAGAGTTTGAGCCAGAA...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR TCA 90 bp TCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTATAAAATCCACAGTAAAATaGAAACTGCCCGGAATCATG +
Preference number: 4 (lower is better)
Translates to: SPCLIYSQEVSVSPCISIKSTVK*KLPGIM
Trigger: CATGATTCCGGGCAGTTTTCATTTTACTGTGGATTT...TATACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGAGCTCAGGCTTCATCCTaGTTTCCAACAATACCTATC +
Preference number: 4 (lower is better)
Translates to: ILSDKTKARNTDTSSESRAQASS*FPTIPI
Trigger: GATAGGTATTGTTGGAAAGCAGGATGAAGCCTGAGC...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGAAGAACCGTCCTTCCATaGTTTCCAATGAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: ILSDKTKARNTDTSSESRRTVLP*FPMKRL
Trigger: CAGCCTTTTCATTGGAAACCATGGAAGGACGGTTCT...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp CAGTCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTTTCTGGTTGTCTCTATaGTGTGGTATGATTTTCATT +
Preference number: 4 (lower is better)
Translates to: QSPCLIYSQEVSVSPCISFWLSL*CGMIFI
Trigger: AATGAAAATCATACCACACCATAGAGACAACCAGAA...ACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp GTCAAGAAAATCTATTTTAAACCCAAATACCCAGCTTCTTGTCCAGTTTGTGGCCTGGTGAGTCTGGTTTaGCTTTCGGATTTCATATTT +
Preference number: 4 (lower is better)
Translates to: VKKIYFKPKYPASCPVCGLVSLV*LSDFIF
Trigger: AAATATGAAATCCGAAAGCCAAACCAGACTCACCAG...GCCACAAACTGGACAAGAAGCTGGGTATTTGGGTTTAAAATAGATTTTCTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATTGCTTGACAGCACAGTaGGTTACATACTTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYCLTAQ*VTYFFL
Trigger: TAAAAAGAAGTATGTAACCCACTGTGCTGTCAAGCA...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR TCA 90 bp GTCAAGAAAATCTATTTTAAACCCAAATACCCAGCTTCTTGTCCAGTTTGTGGCCTCTATGGTGTGGTATaGTTTTCATTATTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VKKIYFKPKYPASCPVCGLYGVV*FSLFSQ
Trigger: CTGGGAAAATAATGAAAATCATACCACACCATAGAG...GCCACAAACTGGACAAGAAGCTGGGTATTTGGGTTTAAAATAGATTTTCTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR TCA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGATTCAGTCACCTTGTTTaGTTTACAGCCAGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: ILSDKTKARNTDTSSESRFSHLV*FTARRL
Trigger: TAACCTCCTGGCTGTAAATCAAACAAGGTGACTGAA...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR GCA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGACTATGTAGTCGTTGGTaGCATTGCTGGTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: ILSDKTKARNTDTSSESRLCSRW*HCWCYH
Trigger: ATGATAACACCAGCAATGGCACCAACGACTACATAG...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CCA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATCTAGTGGTATTATACTaGGTAAATGGCGAAATAAAG +
Preference number: 4 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYLVVLY*VNGEIK
Trigger: CTTTATTTCGCCATTTACCCAGTATAATACCACTAG...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
3UTR CAA 72 bp CTTGGTCAGCTTGTAATAGGTACCATAGAAGTATTTTaGCATCGACTTACACTACCAAATTACTCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: LGQLVIGTIEVF*HRLTLPNYSAQ
Trigger: TTGAGCAGAGTAATTTGGTAGTGTAAGTCGATGCAAAAATACTTCTATGGTACCTATTACAAGCTGACCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR TCA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGATTAAAACTTCCCCAATaGAGGAAGCAGGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: ILSDKTKARNTDTSSESRLKLPQ*RKQDVF
Trigger: AAACACATCCTGCTTCCTTCATTGGGGAAGTTTTAA...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS GCA 90 bp TGCCGGCGGGGACAGGTGGTGCGGACGGGCGCTCCTCGCTCCGGTTaGCGCGGCGGCTCGAACTCCCGGACTGCACACGCAGGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: CRRGQVVRTGAPRSG*RGGSNSRTAHAGSA
Trigger: GGCACTGCCTGCGTGTGCAGTCCGGGAGTTCGAGCCGCCGCGGCAACCGGAGCGAGGAGCGCCCGTCCGCACCACCTGTCCCCGCCGGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS GCA 90 bp AGGGCCCGGCAGAGGGAGCCCAGGTCCCAGCGTCGCCTGAGGACGTaGATCCGCCTGCGGCGGCCCCGGGACAGCAGCGCGAAAAGCGGG +
Preference number: 5 (lower is better)
Translates to: RARQREPRSQRRLRT*IRLRRPRDSSAKSG
Trigger: CCCGCTTTTCGCGCTGCTGTCCCGGGGCCGCCGCAGGCGGATGCACGTCCTCAGGCGACGCTGGGACCTGGGCTCCCTCTGCCGGGCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CCA 90 bp CGGCGACCGACCCGGGCCGGCTCGCTGCCAATTCGGCCTCTACTCTaGAATGCCGGCGGGGACAGGTGGTGCGGACGGGCGCTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: RRPTRAGSLPIRPLL*NAGGDRWCGRALLA
Trigger: AGCGAGGAGCGCCCGTCCGCACCACCTGTCCCCGCCGGCATTCCAGAGTAGAGGCCGAATTGGCAGCGAGCCGGCCCGGGTCGGTCGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS TCA 90 bp GGTGTGGAATCCGTGAGACACACCCCTAGGAGGGCCCGCGCGAACTaGGGCGGCGACCGACCCGGGCCGGCTCGCTGCCAATTCGGCCTC +
Preference number: 5 (lower is better)
Translates to: GVESVRHTPRRARAN*GGDRPGPARCQFGL
Trigger: GAGGCCGAATTGGCAGCGAGCCGGCCCGGGTCGGTCGCCGCCTCAGTTCGCGCGGGCCCTCCTAGGGGTGTGTCTCACGGATTCCACACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CCA 90 bp TCGCTGCCAATTCGGCCTCTACTCTGGAATGCCGGCGGGGACAGGTaGTGCGGACGGGCGCTCCTCGCTCCGGTTGCCGCGGCGGCTCGA +
Preference number: 5 (lower is better)
Translates to: SLPIRPLLWNAGGDR*CGRALLAPVAAAAR
Trigger: TCGAGCCGCCGCGGCAACCGGAGCGAGGAGCGCCCGTCCGCACCACCTGTCCCCGCCGGCATTCCAGAGTAGAGGCCGAATTGGCAGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS TCA 90 bp CGGAGCTCTCATCCTCCGAGCGGTACGGGTCCGGCACCGGGGAGCTaGACGCCTGCAGGCGGAGGAGCTGGCATTCTGTGCCGGGGCACA +
Preference number: 5 (lower is better)
Translates to: RSSHPPSGTGPAPGS*TPAGGGAGILCRGT
Trigger: TGTGCCCCGGCACAGAATGCCAGCTCCTCCGCCTGCAGGCGTTCAGCTCCCCGGTGCCGGACCCGTACCGCTCGGAGGATGAGAGCTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
ENST00000640529.1
CDS GCA 90 bp TCATCCTCCGAGCGGTACGGGTCCGGCACCGGGGAGCTGAACGCCTaGAGGCGGAGGAGCTGGCATTCTGTGCCGGGGCACACGTATTGG +
Preference number: 5 (lower is better)
Translates to: SSSERYGSGTGELNA*RRRSWHSVPGHTYW
Trigger: CCAATACGTGTGCCCCGGCACAGAATGCCAGCTCCTCCGCCTGCAGGCGTTCAGCTCCCCGGTGCCGGACCCGTACCGCTCGGAGGATGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
ENST00000640529.1
CDS CCA 90 bp TACGGGTCCGGCACCGGGGAGCTGAACGCCTGCAGGCGGAGGAGCTaGCATTCTGTGCCGGGGCACACGTATTGGAGGACGATCACGGCA +
Preference number: 5 (lower is better)
Translates to: YGSGTGELNACRRRS*HSVPGHTYWRTITA
Trigger: TGCCGTGATCGTCCTCCAATACGTGTGCCCCGGCACAGAATGCCAGCTCCTCCGCCTGCAGGCGTTCAGCTCCCCGGTGCCGGACCCGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
ENST00000640529.1
CDS CCA 90 bp GCCTGCAGGCGGAGGAGCTGGCATTCTGTGCCGGGGCACACGTATTaGAGGACGATCACGGCAAATAGGAAGAGCATCACCAAAGCTAGC +
Preference number: 5 (lower is better)
Translates to: ACRRRSWHSVPGHTY*RTITANRKSITKAS
Trigger: GCTAGCTTTGGTGATGCTCTTCCTATTTGCCGTGATCGTCCTCCAATACGTGTGCCCCGGCACAGAATGCCAGCTCCTCCGCCTGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS-3UTR CAA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAAGCCTGGCGTCGCGCTaGCCGTCCACCACGGAGGGC +
Preference number: 5 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPSLASR*PSTTEG
Trigger: GCCCTCCGTGGTGGACGGCAAGCGCGACGCCAGGCT...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCAGCCTGGCGTCGCGCTaGCCGTCCACCACGGAGGGC +
Preference number: 5 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSSLASR*PSTTEG
Trigger: GCCCTCCGTGGTGGACGGCAAGCGCGACGCCAGGCT...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGACGCCTTTCGGGGCTaGTCCAGGAGCGGCCGGGTG +
Preference number: 5 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFDAFRG*SRSGRV
Trigger: CACCCGGCCGCTCCTGGACAAGCCCCGAAAGGCGTC...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATCGCTCCTCGCTCCGGTaGCCGCGGCGGCTCGAACTC +
Preference number: 5 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYRSSLR*PRRLEL
Trigger: GAGTTCGAGCCGCCGCGGCAACCGGAGCGAGGAGCG...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp CAGTCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTGACGCCTTTCGGGGCTaGTCCAGGAGCGGCCGGGTG +
Preference number: 5 (lower is better)
Translates to: QSPCLIYSQEVSVSPCISDAFRG*SRSGRV
Trigger: CACCCGGCCGCTCCTGGACAAGCCCCGAAAGGCGTC...ACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CAA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAGCCGGGGCACACGTATaGGAGGACGATCACGGCAAA +
Preference number: 5 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPAGAHV*EDDHGK
Trigger: TTTGCCGTGATCGTCCTCCAATACGTGTGCCCCGGC...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAGCAGCTCTTCGGAGGTaGGAGGCCTTCCATCGCAGA +
Preference number: 5 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPAALRR*EAFHRR
Trigger: TCTGCGATGGAAGGCCTCCAACCTCCGAAGAGCTGC...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS TCA 90 bp GTGGAAGTTCTTCCCACTCTTAGATGTGTTCCGGGTCTTTGTGGATaGCGGAGAGTTGGCGCCTGCGTTAGTGTTTGGAGAACCCCGTTT +
Preference number: 5 (lower is better)
Translates to: VEVLPTLRCVPGLCG*RRVGACVSVWRTPF
Trigger: AAACGGGGTTCTCCAAACACTAACGCAGGCGCCAACTCTCCGTCATCCACAAAGACCCGGAACACATCTAAGAGTGGGAAGAACTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370833.6
ENST00000521489.5
ENST00000640529.1
CDS GCA 90 bp CTATGTAGTCGTTGGTGCCATTGCTGGTGTTATCATTCTGCTCCTTaGCTGAGTTCTGCTTCGGGCTTTCCCGGTTCTCCTTCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: LCSRWCHCWCYHSAP*LSSASGFPGSPSGS
Trigger: TGAGCCAGAAGGAGAACCGGGAAAGCCCGAAGCAGAACTCAGGCAAGGAGCAGAATGATAACACCAGCAATGGCACCAACGACTACATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CCA 90 bp TCACGGCAAATAGGAAGAGCATCACCAAAGCTAGCAGCAGCTTGTTaGATTTCTCATCCATGTTCCCGACGCTGGCCATGGGGCCGAAAA +
Preference number: 5 (lower is better)
Translates to: SRQIGRASPKLAAAC*ISHPCSRRWPWGRK
Trigger: TTTTCGGCCCCATGGCCAGCGTCGGGAACATGGATGAGAAATCCAACAAGCTGCTGCTAGCTTTGGTGATGCTCTTCCTATTTGCCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CCA 90 bp GGAGCCATCCCTCAAACACAGCTGTCATTTGGTGCTCCAGCTTCCTaGGAAAGAGGCTTGTACGTGCCCAGAATCATCATTGTCACACTG +
Preference number: 5 (lower is better)
Translates to: GAIPQTQLSFGAPAS*ERGLYVPRIIIVTL
Trigger: CAGTGTGACAATGATGATTCTGGGCACGTACAAGCCTCTTTCCCAGGAAGCTGGAGCACCAAATGACAGCTGTGTTTGAGGGATGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602570.1
CDS-3UTR CAA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGACGCTCCTCGCTCCGGTaGCCGCGGCGGCTCGAACTC +
Preference number: 5 (lower is better)
Translates to: ILSDKTKARNTDTSSESRRSSLR*PRRLEL
Trigger: GAGTTCGAGCCGCCGCGGCAACCGGAGCGAGGAGCG...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CAA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCACAGTCCATAAACTCTTaGAGGGGGCAGCCAGACCAG +
Preference number: 5 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPQSINS*RGQPDQ
Trigger: CTGGTCTGGCTGCCCCCTCAAAGAGTTTATGGACTG...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCATGGGGCCGAAAATCTaGGAGAAGATCGCACCGAGC +
Preference number: 5 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSMGPKI*EKIAPS
Trigger: GCTCGGTGCGATCTTCTCCAAGATTTTCGGCCCCAT...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATATGTCGAAGTCTACCTaGCGCAGGAGGTCGCCGCGG +
Preference number: 5 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYMSKST*RRRSPR
Trigger: CCGCGGCGACCTCCTGCGCAAGGTAGACTTCGACAT...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCGTGGATGACGGAGAGTaGGCGCCTGCGTTAGTGTTT +
Preference number: 5 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSVDDGE*APALVF
Trigger: AAACACTAACGCAGGCGCCAACTCTCCGTCATCCAC...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521489.5
CDS GCA 90 bp TTTAACGCCATTTCTCTACACTGCCTATGTAGTCGTTGGTGCCATTaGTGGTGTTATCATTCTGCTCCTTGCCTGAGTTCTGCTTCGGGC +
Preference number: 5 (lower is better)
Translates to: FNAISLHCLCSRWCH*WCYHSAPCLSSASG
Trigger: GCCCGAAGCAGAACTCAGGCAAGGAGCAGAATGATAACACCAGCAATGGCACCAACGACTACATAGGCAGTGTAGAGAAATGGCGTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS CCA 90 bp AACGCCATTTCTCTACACTGCCTATGTAGTCGTTGGTGCCATTGCTaGTGTTATCATTCTGCTCCTTGCCTGAGTTCTGCTTCGGGCTTT +
Preference number: 5 (lower is better)
Translates to: NAISLHCLCSRWCHC*CYHSAPCLSSASGF
Trigger: AAAGCCCGAAGCAGAACTCAGGCAAGGAGCAGAATGATAACACCAGCAATGGCACCAACGACTACATAGGCAGTGTAGAGAAATGGCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS-3UTR CAA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAATCAGGTCATCGCCCTaGATGTCGAAGTCTACCTTG +
Preference number: 5 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPIRSSP*MSKSTL
Trigger: CAAGGTAGACTTCGACATCAAGGGCGATGACCTGAT...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCATTATCATTCTGCTCCTaGCCTGAGTTCTGCTTCGGG +
Preference number: 5 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPLSFCS*PEFCFG
Trigger: CCCGAAGCAGAACTCAGGCAAGGAGCAGAATGATAA...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCACTTTTCAGTGGCGCTTaGGGAGAAGTATGTACAGGC +
Preference number: 5 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPLFSGA*GEVCTG
Trigger: GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAG...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS GCA 90 bp GAGCCATTTAACGCCATTTCTCTACACTGCCTATGTAGTCGTTGGTaGCATTGCTGGTGTTATCATTCTGCTCCTTGCCTGAGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: EPFNAISLHCLCSRW*HCWCYHSAPCLSSA
Trigger: AGCAGAACTCAGGCAAGGAGCAGAATGATAACACCAGCAATGGCACCAACGACTACATAGGCAGTGTAGAGAAATGGCGTTAAATGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTATGTGTTCCGGGTCTTaGTGGATGACGGAGAGTTGG +
Preference number: 5 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFMCSGS*WMTESW
Trigger: CCAACTCTCCGTCATCCACAAAGACCCGGAACACAT...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521489.5
CDS-3UTR CAA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCACTTCAGAAATTTGCGTaGTTCCTGACGCTTTCGCCT +
Preference number: 5 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPLQKFA*FLTLSP
Trigger: AGGCGAAAGCGTCAGGAACAACGCAAATTTCTGAAG...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCGCGCATCACTCCACTTaGGCTCGTAATTTCAACCTC +
Preference number: 5 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSAHHST*ARNFNL
Trigger: GAGGTTGAAATTACGAGCCAAAGTGGAGTGATGCGC...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCGCTAGCAGCAGCTTGTaGGATTTCTCATCCATGTTC +
Preference number: 5 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSASSSL*DFSSMF
Trigger: GAACATGGATGAGAAATCCAACAAGCTGCTGCTAGC...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCAAAAGCTAGCAGCAGCTaGTTGGATTTCTCATCCATG +
Preference number: 5 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPKASSS*LDFSSM
Trigger: CATGGATGAGAAATCCAACAAGCTGCTGCTAGCTTT...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGAATGTCGAAGTCTACCTaGCGCAGGAGGTCGCCGCGG +
Preference number: 5 (lower is better)
Translates to: ILSDKTKARNTDTSSESRMSKST*RRRSPR
Trigger: CCGCGGCGACCTCCTGCGCAAGGTAGACTTCGACAT...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CAA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCACCATGTGCTTCAGATTaGACTTGGCACTTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPPCASD*TWHFPE
Trigger: TTCTGGAAAGTGCCAAGTCAAATCTGAAGCACATGG...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCGCGCATCACTCCACTTaGGCTCGTAATTTCAACCTC +
Preference number: 5 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGAHHST*ARNFNL
Trigger: GAGGTTGAAATTACGAGCCAAAGTGGAGTGATGCGC...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTCAGTGGCGCTTaGGGAGAAGTATGTACAGGC +
Preference number: 5 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGLFSGA*GEVCTG
Trigger: GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAG...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS CCA 90 bp TTTGAGCCATTTAACGCCATTTCTCTACACTGCCTATGTAGTCGTTaGTGCCATTGCTGGTGTTATCATTCTGCTCCTTGCCTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: FEPFNAISLHCLCSR*CHCWCYHSAPCLSS
Trigger: AGAACTCAGGCAAGGAGCAGAATGATAACACCAGCAATGGCACCAACGACTACATAGGCAGTGTAGAGAAATGGCGTTAAATGGCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp ATACTGTCAGACAAAACAAAAGCTAGAAATACTGATACAAGCTCAGAGTCAAGAGCCGGGGCACACGTATaGGAGGACGATCACGGCAAA +
Preference number: 5 (lower is better)
Translates to: ILSDKTKARNTDTSSESRAGAHV*EDDHGK
Trigger: TTTGCCGTGATCGTCCTCCAATACGTGTGCCCCGGC...TCTTGACTCTGAGCTTGTATCAGTATTTCTAGCTTTTGTTTTGTCTGACAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CAA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCTGCTTCAGATTTGACTaGGCACTTTCCAGAAGGACC +
Preference number: 5 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGCFRFD*ALSRRT
Trigger: GGTCCTTCTGGAAAGTGCCAAGTCAAATCTGAAGCA...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCCATGTGCTTCAGATTaGACTTGGCACTTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSPCASD*TWHFPE
Trigger: TTCTGGAAAGTGCCAAGTCAAATCTGAAGCACATGG...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp AAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTCTTCAGAAATTTGCGTaGTTCCTGACGCTTTCGCCT +
Preference number: 5 (lower is better)
Translates to: KLCHLFSGALGEVCTGLFLQKFA*FLTLSP
Trigger: AGGCGAAAGCGTCAGGAACAACGCAAATTTCTGAAG...AAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp CAGTCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTTTATCATTCTGCTCCTaGCCTGAGTTCTGCTTCGGG +
Preference number: 5 (lower is better)
Translates to: QSPCLIYSQEVSVSPCISLSFCS*PEFCFG
Trigger: CCCGAAGCAGAACTCAGGCAAGGAGCAGAATGATAA...ACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CAA 90 bp TGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCATCTGGTGAGTCTGGTTaGGCTTTCGGATTTCATATT +
Preference number: 5 (lower is better)
Translates to: CHLFSGALGEVCTGLFEPSGESG*AFGFHI
Trigger: AATATGAAATCCGAAAGCCAAACCAGACTCACCAGA...TGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CAA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCCCACTTTCAGTCACCTaGTTTGATTTACAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSPLSVT*FDLQPG
Trigger: TCCTGGCTGTAAATCAAACAAGGTGACTGAAAGTGG...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS GCA 90 bp GTATGTACAGGCCTTTTTGAGCCATTTAACGCCATTTCTCTACACTaGCTATGTAGTCGTTGGTGCCATTGCTGGTGTTATCATTCTGCT +
Preference number: 5 (lower is better)
Translates to: VCTGLFEPFNAISLH*LCSRWCHCWCYHSA
Trigger: AGCAGAATGATAACACCAGCAATGGCACCAACGACTACATAGGCAGTGTAGAGAAATGGCGTTAAATGGCTCAAAAAGGCCTGTACATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCAAAGCTAGCAGCAGCTaGTTGGATTTCTCATCCATG +
Preference number: 5 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGKASSS*LDFSSM
Trigger: CATGGATGAGAAATCCAACAAGCTGCTGCTAGCTTT...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATATCAGGTCATCGCCCTaGATGTCGAAGTCTACCTTG +
Preference number: 5 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYIRSSP*MSKSTL
Trigger: CAAGGTAGACTTCGACATCAAGGGCGATGACCTGAT...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp CAGTCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTTGCTTCAGATTTGACTaGGCACTTTCCAGAAGGACC +
Preference number: 5 (lower is better)
Translates to: QSPCLIYSQEVSVSPCISCFRFD*ALSRRT
Trigger: GGTCCTTCTGGAAAGTGCCAAGTCAAATCTGAAGCA...ACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CAA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCTTTCTCAAACAGATATaGGGTCTTCCGCTGAAACTC +
Preference number: 5 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSFLKQI*GLPLKL
Trigger: GAGTTTCAGCGGAAGACCCAATATCTGTTTGAGAAA...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS CCA 90 bp AACTCTGAGTCAGATTCTGCATCAGATTCTGAGTCAGGTTCTGATTaGCATTCGGATTTGGGTTCTGACTCTGATTCTGATTCGGATTCT +
Preference number: 5 (lower is better)
Translates to: NSESDSASDSESGSD*HSDLGSDSDSDSDS
Trigger: AGAATCCGAATCAGAATCAGAGTCAGAACCCAAATCCGAATGCCAATCAGAACCTGACTCAGAATCTGATGCAGAATCTGACTCAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS-3UTR CAA 90 bp TCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCTTTCTCAAACAGATATaGGGTCTTCCGCTGAAACTC +
Preference number: 5 (lower is better)
Translates to: SFKLCHLFSGALGEVCTGFLKQI*GLPLKL
Trigger: GAGTTTCAGCGGAAGACCCAATATCTGTTTGAGAAA...GCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp TATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTTGAGCTCCCTCAATACGCTTTaGAATTTCCTCATTGATCTC +
Preference number: 5 (lower is better)
Translates to: YAIFSVALWEKYVQAFLSSLNTL*NFLIDL
Trigger: GAGATCAATGAGGAAATTCAAAAGCGTATTGAGGGA...GCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp TCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTATAGCTAGCAGCAGCTTGTaGGATTTCTCATCCATGTTC +
Preference number: 5 (lower is better)
Translates to: SPCLIYSQEVSVSPCISIASSSL*DFSSMF
Trigger: GAACATGGATGAGAAATCCAACAAGCTGCTGCTAGC...TATACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CAA 90 bp CAGTCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTAAGGACCTTGTTTCTTaGCTTTTCAGGCATGACAGA +
Preference number: 5 (lower is better)
Translates to: QSPCLIYSQEVSVSPCISKDLVS*LFRHDR
Trigger: TCTGTCATGCCTGAAAAGCAAAGAAACAAGGTCCTT...ACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CAA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATCTTTCCAGAAGGACCTaGTTTCTTTGCTTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYLSRRT*FLCFSG
Trigger: GCCTGAAAAGCAAAGAAACAAGGTCCTTCTGGAAAG...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATCCCGTTTATCCTTACTaGCTGCATCTAGAATCTGAA +
Preference number: 5 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYPVYPY*LHLESE
Trigger: TTCAGATTCTAGATGCAGCAAGTAAGGATAAACGGG...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521489.5
CDS-3UTR CAA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATAAGGACCTTGTTTCTTaGCTTTTCAGGCATGACAGA +
Preference number: 5 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYKDLVS*LFRHDR
Trigger: TCTGTCATGCCTGAAAAGCAAAGAAACAAGGTCCTT...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp GTCAAGAAAATCTATTTTAAACCCAAATACCCAGCTTCTTGTCCAGTTTGTGGCCTTTCCAGAAGGACCTaGTTTCTTTGCTTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: VKKIYFKPKYPASCPVCGLSRRT*FLCFSG
Trigger: GCCTGAAAAGCAAAGAAACAAGGTCCTTCTGGAAAG...GCCACAAACTGGACAAGAAGCTGGGTATTTGGGTTTAAAATAGATTTTCTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CAA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATTCCTGTTCAAGTTTCTaGATTAGGACCTCACTACAC +
Preference number: 5 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYSCSSF*IRTSLH
Trigger: GTGTAGTGAGGTCCTAATCAAGAAACTTGAACAGGA...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CAA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATCAAATACCCAGCTTCTaGTCCAGTTTGTGGCTATAT +
Preference number: 5 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYQIPSF*SSLWLY
Trigger: ATATAGCCACAAACTGGACAAGAAGCTGGGTATTTG...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS TCA 90 bp CTGTACAACTCCATATCCAGAAAATTCAGTCCCTCAATACGCTTTTaGATTTCCTCATTGATCTCTACACTAGAGGCCCTAGTGGTATTA +
Preference number: 5 (lower is better)
Translates to: LYNSISRKFSPSIRF*ISSLISTLEALVVL
Trigger: TAATACCACTAGGGCCTCTAGTGTAGAGATCAATGAGGAAATTCAAAAGCGTATTGAGGGACTGAATTTTCTGGATATGGAGTTGTACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS-3UTR CAA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATTCCCTCAATACGCTTTaGAATTTCCTCATTGATCTC +
Preference number: 5 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYSLNTL*NFLIDL
Trigger: GAGATCAATGAGGAAATTCAAAAGCGTATTGAGGGA...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGGATCACGAGCGAGCTaGAATTTATATAATAATGCC +
Preference number: 5 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYGSRAS*NLYNNA
Trigger: GGCATTATTATATAAATTCAAGCTCGCTCGTGATCC...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp CACTTTCATCTTTTAAGCTATGCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATCAGTATAACACTGAATaGAAAGGCAACTGTAAAGGC +
Preference number: 5 (lower is better)
Translates to: HFHLLSYAIFSVALWEKYQYNTE*KGNCKG
Trigger: GCCTTTACAGTTGCCTTTCAATTCAGTGTTATACTG...ATACTTCTCCCAAAGCGCCACTGAAAAGATGGCATAGCTTAAAAGATGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS-3UTR CAA 90 bp CAGTCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTATGATTCCAGTATTGTaGAAATTACAGTGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: QSPCLIYSQEVSVSPCISMIPVL*KLQCPE
Trigger: TTCAGGGCACTGTAATTTCAACAATACTGGAATCAT...ACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CAA 90 bp TCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTATAGGATCACGAGCGAGCTaGAATTTATATAATAATGCC +
Preference number: 5 (lower is better)
Translates to: SPCLIYSQEVSVSPCISIGSRAS*NLYNNA
Trigger: GGCATTATTATATAAATTCAAGCTCGCTCGTGATCC...TATACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS-3UTR CAA 90 bp TCACCTTGTTTGATTTACAGCCAGGAGGTTAGTGTAAGTCCTTGCATAAGTATAAGCTTCTTGTCCAGTTaGTGGCTATATTACTACAGA +
Preference number: 5 (lower is better)
Translates to: SPCLIYSQEVSVSPCISISFLSS*WLYYYR
Trigger: TCTGTAGTAATATAGCCACAAACTGGACAAGAAGCT...TATACTTATGCAAGGACTTACACTAACCTCCTGGCTGTAAATCAAACAAGGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370836.6
CDS CCA 90 bp ATTTCCTCATTGATCTCTACACTAGAGGCCCTAGTGGTATTATACTaGGTAAATGGCGAAATAAAGTTCATGTTGAAGGTTTTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: ISSLISTLEALVVLY*VNGEIKFMLKVFSN
Trigger: GTTTGAGAAAACCTTCAACATGAACTTTATTTCGCCATTTACCCAGTATAATACCACTAGGGCCTCTAGTGTAGAGATCAATGAGGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CCA 90 bp ATTGATCTCTACACTAGAGGCCCTAGTGGTATTATACTGGGTAAATaGCGAAATAAAGTTCATGTTGAAGGTTTTCTCAAACAGATATTG +
Preference number: 5 (lower is better)
Translates to: IDLYTRGPSGIILGK*RNKVHVEGFLKQIL
Trigger: CAATATCTGTTTGAGAAAACCTTCAACATGAACTTTATTTCGCCATTTACCCAGTATAATACCACTAGGGCCTCTAGTGTAGAGATCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS GCA 72 bp CAGAGGGAGCCCAGGTCCCAGCGTCGCCTGAGGACGTaGATCCGCCTGCGGCGGCCCCGGGACAGCAGCGCG +
Preference number: 6 (lower is better)
Translates to: QREPRSQRRLRT*IRLRRPRDSSA
Trigger: CGCGCTGCTGTCCCGGGGCCGCCGCAGGCGGATGCACGTCCTCAGGCGACGCTGGGACCTGGGCTCCCTCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS GCA 72 bp CGGCCTCTACTCTGGAATGCCGGCGGGGACAGGTGGTaGGGACGGGCGCTCCTCGCTCCGGTTGCCGCGGCG +
Preference number: 6 (lower is better)
Translates to: RPLLWNAGGDRW*GRALLAPVAAA
Trigger: CGCCGCGGCAACCGGAGCGAGGAGCGCCCGTCCGCACCACCTGTCCCCGCCGGCATTCCAGAGTAGAGGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CAA 72 bp GGGACAGGTGGTGCGGACGGGCGCTCCTCGCTCCGGTaGCCGCGGCGGCTCGAACTCCCGGACTGCACACGC +
Preference number: 6 (lower is better)
Translates to: GTGGADGRSSLR*PRRLELPDCTR
Trigger: GCGTGTGCAGTCCGGGAGTTCGAGCCGCCGCGGCAACCGGAGCGAGGAGCGCCCGTCCGCACCACCTGTCCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CAA 90 bp ATGCCGGCGGGGACAGGTGGTGCGGACGGGCGCTCCTCGCTCCGGTaGCCGCGGCGGCTCGAACTCCCGGACTGCACACGCAGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: MPAGTGGADGRSSLR*PRRLELPDCTRRQC
Trigger: GCACTGCCTGCGTGTGCAGTCCGGGAGTTCGAGCCGCCGCGGCAACCGGAGCGAGGAGCGCCCGTCCGCACCACCTGTCCCCGCCGGCAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS TCA 72 bp TCCGTGAGACACACCCCTAGGAGGGCCCGCGCGAACTaGGGCGGCGACCGACCCGGGCCGGCTCGCTGCCAA +
Preference number: 6 (lower is better)
Translates to: SVRHTPRRARAN*GGDRPGPARCQ
Trigger: TTGGCAGCGAGCCGGCCCGGGTCGGTCGCCGCCTCAGTTCGCGCGGGCCCTCCTAGGGGTGTGTCTCACGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS GCA 72 bp GGACAGGTGGTGCGGACGGGCGCTCCTCGCTCCGGTTaGCGCGGCGGCTCGAACTCCCGGACTGCACACGCA +
Preference number: 6 (lower is better)
Translates to: GQVVRTGAPRSG*RGGSNSRTAHA
Trigger: TGCGTGTGCAGTCCGGGAGTTCGAGCCGCCGCGGCAACCGGAGCGAGGAGCGCCCGTCCGCACCACCTGTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CCA 72 bp ACCCGGGCCGGCTCGCTGCCAATTCGGCCTCTACTCTaGAATGCCGGCGGGGACAGGTGGTGCGGACGGGCG +
Preference number: 6 (lower is better)
Translates to: TRAGSLPIRPLL*NAGGDRWCGRA
Trigger: CGCCCGTCCGCACCACCTGTCCCCGCCGGCATTCCAGAGTAGAGGCCGAATTGGCAGCGAGCCGGCCCGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CCA 72 bp ATTCGGCCTCTACTCTGGAATGCCGGCGGGGACAGGTaGTGCGGACGGGCGCTCCTCGCTCCGGTTGCCGCG +
Preference number: 6 (lower is better)
Translates to: IRPLLWNAGGDR*CGRALLAPVAA
Trigger: CGCGGCAACCGGAGCGAGGAGCGCCCGTCCGCACCACCTGTCCCCGCCGGCATTCCAGAGTAGAGGCCGAAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS TCA 72 bp CATCCTCCGAGCGGTACGGGTCCGGCACCGGGGAGCTaGACGCCTGCAGGCGGAGGAGCTGGCATTCTGTGC +
Preference number: 6 (lower is better)
Translates to: HPPSGTGPAPGS*TPAGGGAGILC
Trigger: GCACAGAATGCCAGCTCCTCCGCCTGCAGGCGTTCAGCTCCCCGGTGCCGGACCCGTACCGCTCGGAGGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
ENST00000640529.1
CDS CCA 72 bp GGCACCGGGGAGCTGAACGCCTGCAGGCGGAGGAGCTaGCATTCTGTGCCGGGGCACACGTATTGGAGGACG +
Preference number: 6 (lower is better)
Translates to: GTGELNACRRRS*HSVPGHTYWRT
Trigger: CGTCCTCCAATACGTGTGCCCCGGCACAGAATGCCAGCTCCTCCGCCTGCAGGCGTTCAGCTCCCCGGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
ENST00000640529.1
CDS CAA 72 bp ATCCTCCACCTGGACGGTCTCAGCCTGGCGTCGCGCTaGCCGTCCACCACGGAGGGCACACAGCTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: ILHLDGLSLASR*PSTTEGTQLVS
Trigger: GCTCACCAGCTGTGTGCCCTCCGTGGTGGACGGCAAGCGCGACGCCAGGCTGAGACCGTCCAGGTGGAGGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370833.6
ENST00000521489.5
CDS CAA 72 bp TGGAAGTTCCTGGACGGTCTCAGCCTGGCGTCGCGCTaGCCGTCCACCACGGAGGGCACACAGCTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: WKFLDGLSLASR*PSTTEGTQLVS
Trigger: GCTCACCAGCTGTGTGCCCTCCGTGGTGGACGGCAAGCGCGACGCCAGGCTGAGACCGTCCAGGAACTTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000406696.4
CDS TCA 72 bp TGTCGAAGTCTACCTTGCGCAGGAGGTCGCCGCGGGTaGAATTGTAGCGGGGCACGAACCTGGCGGAGCTCT +
Preference number: 6 (lower is better)
Translates to: CRSLPCAGGRRG*NCSGARTWRSS
Trigger: AGAGCTCCGCCAGGTTCGTGCCCCGCTACAATTTCACCCGCGGCGACCTCCTGCGCAAGGTAGACTTCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
ENST00000640529.1
CDS CCA 72 bp GAATCTGAAAAATCCTCCACCTGGACGGTCTCAGCCTaGCGTCGCGCTTGCCGTCCACCACGGAGGGCACAC +
Preference number: 6 (lower is better)
Translates to: ESEKSSTWTVSA*RRACRPPRRAH
Trigger: GTGTGCCCTCCGTGGTGGACGGCAAGCGCGACGCCAGGCTGAGACCGTCCAGGTGGAGGATTTTTCAGATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370833.6
ENST00000521489.5
CDS CCA 72 bp CCATGTTCCCGACGCTGGCCATGGGGCCGAAAATCTTaGAGAAGATCGCACCGAGCACGTGCTTCAGCGAGT +
Preference number: 6 (lower is better)
Translates to: PCSRRWPWGRKS*RRSHRARASAS
Trigger: ACTCGCTGAAGCACGTGCTCGGTGCGATCTTCTCCAAGATTTTCGGCCCCATGGCCAGCGTCGGGAACATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CAA 72 bp TCCATGTTCCCGACGCTGGCCATGGGGCCGAAAATCTaGGAGAAGATCGCACCGAGCACGTGCTTCAGCGAG +
Preference number: 6 (lower is better)
Translates to: SMFPTLAMGPKI*EKIAPSTCFSE
Trigger: CTCGCTGAAGCACGTGCTCGGTGCGATCTTCTCCAAGATTTTCGGCCCCATGGCCAGCGTCGGGAACATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CAA 72 bp CATCGCCAGTGTAGCAGCTGGGCAGCTCTTCGGAGGTaGGAGGCCTTCCATCGCAGACATGCAGGGATGCTT +
Preference number: 6 (lower is better)
Translates to: HRQCSSWAALRR*EAFHRRHAGML
Trigger: AAGCATCCCTGCATGTCTGCGATGGAAGGCCTCCAACCTCCGAAGAGCTGCCCAGCTGCTACACTGGCGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
ENST00000640529.1
CDS CCA 72 bp CGGAGGAGCTGGCATTCTGTGCCGGGGCACACGTATTaGAGGACGATCACGGCAAATAGGAAGAGCATCACC +
Preference number: 6 (lower is better)
Translates to: RRSWHSVPGHTY*RTITANRKSIT
Trigger: GGTGATGCTCTTCCTATTTGCCGTGATCGTCCTCCAATACGTGTGCCCCGGCACAGAATGCCAGCTCCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CCA 72 bp ATCGCCAGTGTAGCAGCTGGGCAGCTCTTCGGAGGTTaGAGGCCTTCCATCGCAGACATGCAGGGATGCTTT +
Preference number: 6 (lower is better)
Translates to: IASVAAGQLFGG*RPSIADMQGCF
Trigger: AAAGCATCCCTGCATGTCTGCGATGGAAGGCCTCCAACCTCCGAAGAGCTGCCCAGCTGCTACACTGGCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
ENST00000640529.1
CDS CCA 72 bp CAGACATGCAGGGATGCTTTCCATGTTGCCCCTCTCTaGACATGCCTCCACTCACTCAAGTACCGGGACACT +
Preference number: 6 (lower is better)
Translates to: QTCRDAFHVAPL*TCLHSLKYRDT
Trigger: AGTGTCCCGGTACTTGAGTGAGTGGAGGCATGTCCAGAGAGGGGCAACATGGAAAGCATCCCTGCATGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
ENST00000640529.1
CDS CAA 90 bp ACGATCACGGCAAATAGGAAGAGCATCACCAAAGCTAGCAGCAGCTaGTTGGATTTCTCATCCATGTTCCCGACGCTGGCCATGGGGCCG +
Preference number: 6 (lower is better)
Translates to: TITANRKSITKASSS*LDFSSMFPTLAMGP
Trigger: CGGCCCCATGGCCAGCGTCGGGAACATGGATGAGAAATCCAACAAGCTGCTGCTAGCTTTGGTGATGCTCTTCCTATTTGCCGTGATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS GCA 72 bp CGTTGGTGCCATTGCTGGTGTTATCATTCTGCTCCTTaGCTGAGTTCTGCTTCGGGCTTTCCCGGTTCTCCT +
Preference number: 6 (lower is better)
Translates to: RWCHCWCYHSAP*LSSASGFPGSP
Trigger: AGGAGAACCGGGAAAGCCCGAAGCAGAACTCAGGCAAGGAGCAGAATGATAACACCAGCAATGGCACCAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CAA 72 bp ATGGGTCTGAAGGAGCCTTCCCTTCAGAAATTTGCGTaGTTCCTGACGCTTTCGCCTGGCCTCCTGATGCTC +
Preference number: 6 (lower is better)
Translates to: MGLKEPSLQKFA*FLTLSPGLLML
Trigger: GAGCATCAGGAGGCCAGGCGAAAGCGTCAGGAACAACGCAAATTTCTGAAGGGAAGGCTCCTTCAGACCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CAA 72 bp TCGTTGGTGCCATTGCTGGTGTTATCATTCTGCTCCTaGCCTGAGTTCTGCTTCGGGCTTTCCCGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: SLVPLLVLSFCS*PEFCFGLSRFS
Trigger: GGAGAACCGGGAAAGCCCGAAGCAGAACTCAGGCAAGGAGCAGAATGATAACACCAGCAATGGCACCAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS TCA 72 bp CTTCCCACTCTTAGATGTGTTCCGGGTCTTTGTGGATaGCGGAGAGTTGGCGCCTGCGTTAGTGTTTGGAGA +
Preference number: 6 (lower is better)
Translates to: LPTLRCVPGLCG*RRVGACVSVWR
Trigger: TCTCCAAACACTAACGCAGGCGCCAACTCTCCGTCATCCACAAAGACCCGGAACACATCTAAGAGTGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370833.6
ENST00000521489.5
ENST00000640529.1
CDS GCA 72 bp GGAAATGGGTCTGAAGGAGCCTTCCCTTCAGAAATTTaGGTTGTTCCTGACGCTTTCGCCTGGCCTCCTGAT +
Preference number: 6 (lower is better)
Translates to: GNGSEGAFPSEI*VVPDAFAWPPD
Trigger: ATCAGGAGGCCAGGCGAAAGCGTCAGGAACAACGCAAATTTCTGAAGGGAAGGCTCCTTCAGACCCATTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CAA 90 bp ATCACGGCAAATAGGAAGAGCATCACCAAAGCTAGCAGCAGCTTGTaGGATTTCTCATCCATGTTCCCGACGCTGGCCATGGGGCCGAAA +
Preference number: 6 (lower is better)
Translates to: ITANRKSITKASSSL*DFSSMFPTLAMGPK
Trigger: TTTCGGCCCCATGGCCAGCGTCGGGAACATGGATGAGAAATCCAACAAGCTGCTGCTAGCTTTGGTGATGCTCTTCCTATTTGCCGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CAA 90 bp CAAACACAGCTGTCATTTGGTGCTCCAGCTTCCTGGGAAAGAGGCTaGTACGTGCCCAGAATCATCATTGTCACACTGATGGGGGATGGT +
Preference number: 6 (lower is better)
Translates to: QTQLSFGAPASWERG*YVPRIIIVTLMGDG
Trigger: ACCATCCCCCATCAGTGTGACAATGATGATTCTGGGCACGTACAAGCCTCTTTCCCAGGAAGCTGGAGCACCAAATGACAGCTGTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602570.1
CDS GCA 72 bp TTGCTGGTGTTATCATTCTGCTCCTTGCCTGAGTTCTaGTTCGGGCTTTCCCGGTTCTCCTTCTGGCTCAAA +
Preference number: 6 (lower is better)
Translates to: LLVLSFCSLPEF*FGLSRFSFWLK
Trigger: TTTGAGCCAGAAGGAGAACCGGGAAAGCCCGAAGCAGAACTCAGGCAAGGAGCAGAATGATAACACCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS GCA 72 bp AGCAAAGGCGCAAATTGGAGCTTTTCCGTCTCTCTTTaGCAATTTCCATTCTCCAGCGGAAGCGGGGGCATT +
Preference number: 6 (lower is better)
Translates to: SKGANWSFSVSL*QFPFSSGSGGI
Trigger: AATGCCCCCGCTTCCGCTGGAGAATGGAAATTGGCAAAGAGAGACGGAAAAGCTCCAATTTGCGCCTTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS CCA 72 bp ATAGGAAGAGCATCACCAAAGCTAGCAGCAGCTTGTTaGATTTCTCATCCATGTTCCCGACGCTGGCCATGG +
Preference number: 6 (lower is better)
Translates to: IGRASPKLAAAC*ISHPCSRRWPW
Trigger: CCATGGCCAGCGTCGGGAACATGGATGAGAAATCCAACAAGCTGCTGCTAGCTTTGGTGATGCTCTTCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CAA 72 bp GCAAATAGGAAGAGCATCACCAAAGCTAGCAGCAGCTaGTTGGATTTCTCATCCATGTTCCCGACGCTGGCC +
Preference number: 6 (lower is better)
Translates to: ANRKSITKASSS*LDFSSMFPTLA
Trigger: GGCCAGCGTCGGGAACATGGATGAGAAATCCAACAAGCTGCTGCTAGCTTTGGTGATGCTCTTCCTATTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CAA 72 bp TTAGATGTGTTCCGGGTCTTTGTGGATGACGGAGAGTaGGCGCCTGCGTTAGTGTTTGGAGAACCCCGTTTA +
Preference number: 6 (lower is better)
Translates to: LDVFRVFVDDGE*APALVFGEPRL
Trigger: TAAACGGGGTTCTCCAAACACTAACGCAGGCGCCAACTCTCCGTCATCCACAAAGACCCGGAACACATCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370833.6
ENST00000521489.5
ENST00000640529.1
CDS CAA 90 bp TTCCCACTCTTAGATGTGTTCCGGGTCTTTGTGGATGACGGAGAGTaGGCGCCTGCGTTAGTGTTTGGAGAACCCCGTTTATCCTTACTT +
Preference number: 6 (lower is better)
Translates to: FPLLDVFRVFVDDGE*APALVFGEPRLSLL
Trigger: AAGTAAGGATAAACGGGGTTCTCCAAACACTAACGCAGGCGCCAACTCTCCGTCATCCACAAAGACCCGGAACACATCTAAGAGTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370833.6
ENST00000521489.5
ENST00000640529.1
CDS CCA 72 bp CCTCAAACACAGCTGTCATTTGGTGCTCCAGCTTCCTaGGAAAGAGGCTTGTACGTGCCCAGAATCATCATT +
Preference number: 6 (lower is better)
Translates to: PQTQLSFGAPAS*ERGLYVPRIII
Trigger: AATGATGATTCTGGGCACGTACAAGCCTCTTTCCCAGGAAGCTGGAGCACCAAATGACAGCTGTGTTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602570.1
CDS CCA 72 bp TCTCTACACTGCCTATGTAGTCGTTGGTGCCATTGCTaGTGTTATCATTCTGCTCCTTGCCTGAGTTCTGCT +
Preference number: 6 (lower is better)
Translates to: SLHCLCSRWCHC*CYHSAPCLSSA
Trigger: AGCAGAACTCAGGCAAGGAGCAGAATGATAACACCAGCAATGGCACCAACGACTACATAGGCAGTGTAGAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CAA 90 bp TTCTGGAAGGCGAGGAGAACTCTGTCATCTGAGCAGGGCTTCTGGTaGTCTCTATGGTGTGGTATGATTTTCATTATTTTCCCAGAACCG +
Preference number: 6 (lower is better)
Translates to: FWKARRTLSSEQGFW*SLWCGMIFIIFPEP
Trigger: CGGTTCTGGGAAAATAATGAAAATCATACCACACCATAGAGACAACCAGAAGCCCTGCTCAGATGACAGAGTTCTCCTCGCCTTCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS TCA 72 bp TCTCAAACAGATATTGGGTCTTCCGCTGAAACTCAGTaGGGCCGAAGAACGCCATGTGCTTCAGATTTGACT +
Preference number: 6 (lower is better)
Translates to: SQTDIGSSAETQ*GRRTPCASDLT
Trigger: AGTCAAATCTGAAGCACATGGCGTTCTTCGGCCTCACTGAGTTTCAGCGGAAGACCCAATATCTGTTTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CAA 90 bp GCCATCTTTTCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTaGAGCCATTTAACGCCATTTCTCTACACTGCCTATGTAGTCGTT +
Preference number: 6 (lower is better)
Translates to: AIFSVALWEKYVQAF*SHLTPFLYTAYVVV
Trigger: AACGACTACATAGGCAGTGTAGAGAAATGGCGTTAAATGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGAAAAGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS GCA 72 bp ATTTCTCTACACTGCCTATGTAGTCGTTGGTGCCATTaGTGGTGTTATCATTCTGCTCCTTGCCTGAGTTCT +
Preference number: 6 (lower is better)
Translates to: ISLHCLCSRWCH*WCYHSAPCLSS
Trigger: AGAACTCAGGCAAGGAGCAGAATGATAACACCAGCAATGGCACCAACGACTACATAGGCAGTGTAGAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CCA 72 bp CAGATTCTGAGTCAGGTTCTGATTGGCATTCGGATTTaGGTTCTGACTCTGATTCTGATTCGGATTCTGGCT +
Preference number: 6 (lower is better)
Translates to: QILSQVLIGIRI*VLTLILIRILA
Trigger: AGCCAGAATCCGAATCAGAATCAGAGTCAGAACCCAAATCCGAATGCCAATCAGAACCTGACTCAGAATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CCA 72 bp TTTAACGCCATTTCTCTACACTGCCTATGTAGTCGTTaGTGCCATTGCTGGTGTTATCATTCTGCTCCTTGC +
Preference number: 6 (lower is better)
Translates to: FNAISLHCLCSR*CHCWCYHSAPC
Trigger: GCAAGGAGCAGAATGATAACACCAGCAATGGCACCAACGACTACATAGGCAGTGTAGAGAAATGGCGTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS CAA 72 bp TCAGATTCTGAGTCAGGTTCTGATTGGCATTCGGATTaGGGTTCTGACTCTGATTCTGATTCGGATTCTGGC +
Preference number: 6 (lower is better)
Translates to: SDSESGSDWHSD*GSDSDSDSDSG
Trigger: GCCAGAATCCGAATCAGAATCAGAGTCAGAACCCAAATCCGAATGCCAATCAGAACCTGACTCAGAATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CAA 72 bp TCAGTGGCGCTTTGGGAGAAGTATGTACAGGCCTTTTaGAGCCATTTAACGCCATTTCTCTACACTGCCTAT +
Preference number: 6 (lower is better)
Translates to: SVALWEKYVQAF*SHLTPFLYTAY
Trigger: ATAGGCAGTGTAGAGAAATGGCGTTAAATGGCTCAAAAAGGCCTGTACATACTTCTCCCAAAGCGCCACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS CCA 72 bp AAGGCGAGGAGAACTCTGTCATCTGAGCAGGGCTTCTaGTTGTCTCTATGGTGTGGTATGATTTTCATTATT +
Preference number: 6 (lower is better)
Translates to: KARRTLSSEQGF*LSLWCGMIFII
Trigger: AATAATGAAAATCATACCACACCATAGAGACAACCAGAAGCCCTGCTCAGATGACAGAGTTCTCCTCGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS CAA 72 bp TGCTTCAGATTTGACTTGGCACTTTCCAGAAGGACCTaGTTTCTTTGCTTTTCAGGCATGACAGAGAGGTTG +
Preference number: 6 (lower is better)
Translates to: CFRFDLALSRRT*FLCFSGMTERL
Trigger: CAACCTCTCTGTCATGCCTGAAAAGCAAAGAAACAAGGTCCTTCTGGAAAGTGCCAAGTCAAATCTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CAA 72 bp GCGAGGAGAACTCTGTCATCTGAGCAGGGCTTCTGGTaGTCTCTATGGTGTGGTATGATTTTCATTATTTTC +
Preference number: 6 (lower is better)
Translates to: ARRTLSSEQGFW*SLWCGMIFIIF
Trigger: GAAAATAATGAAAATCATACCACACCATAGAGACAACCAGAAGCCCTGCTCAGATGACAGAGTTCTCCTCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370836.6
ENST00000521489.5
CDS CCA 72 bp TCAGATTCTGCATCAGATTCTGAGTCAGGTTCTGATTaGCATTCGGATTTGGGTTCTGACTCTGATTCTGAT +
Preference number: 6 (lower is better)
Translates to: SDSASDSESGSD*HSDLGSDSDSD
Trigger: ATCAGAATCAGAGTCAGAACCCAAATCCGAATGCCAATCAGAACCTGACTCAGAATCTGATGCAGAATCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CAA 72 bp CTCCATATCCAGAAAATTCAGTCCCTCAATACGCTTTaGAATTTCCTCATTGATCTCTACACTAGAGGCCCT +
Preference number: 6 (lower is better)
Translates to: LHIQKIQSLNTL*NFLIDLYTRGP
Trigger: AGGGCCTCTAGTGTAGAGATCAATGAGGAAATTCAAAAGCGTATTGAGGGACTGAATTTTCTGGATATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CAA 90 bp GCTGTACAACTCCATATCCAGAAAATTCAGTCCCTCAATACGCTTTaGAATTTCCTCATTGATCTCTACACTAGAGGCCCTAGTGGTATT +
Preference number: 6 (lower is better)
Translates to: AVQLHIQKIQSLNTL*NFLIDLYTRGPSGI
Trigger: AATACCACTAGGGCCTCTAGTGTAGAGATCAATGAGGAAATTCAAAAGCGTATTGAGGGACTGAATTTTCTGGATATGGAGTTGTACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS TCA 72 bp TCCATATCCAGAAAATTCAGTCCCTCAATACGCTTTTaGATTTCCTCATTGATCTCTACACTAGAGGCCCTA +
Preference number: 6 (lower is better)
Translates to: SISRKFSPSIRF*ISSLISTLEAL
Trigger: TAGGGCCTCTAGTGTAGAGATCAATGAGGAAATTCAAAAGCGTATTGAGGGACTGAATTTTCTGGATATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5
CDS CCA 72 bp TTGATCTCTACACTAGAGGCCCTAGTGGTATTATACTaGGTAAATGGCGAAATAAAGTTCATGTTGAAGGTT +
Preference number: 6 (lower is better)
Translates to: LISTLEALVVLY*VNGEIKFMLKV
Trigger: AACCTTCAACATGAACTTTATTTCGCCATTTACCCAGTATAATACCACTAGGGCCTCTAGTGTAGAGATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370833.6
ENST00000370836.6
ENST00000406696.4
ENST00000521489.5